XFC3_12165 e0e58741754c268ffad72f0f4ce65709 564 SUPERFAMILY SSF50249 195 269 1.43E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_12165 e0e58741754c268ffad72f0f4ce65709 564 SUPERFAMILY SSF68912 147 192 1.29E-7 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily XFC3_12165 e0e58741754c268ffad72f0f4ce65709 564 Pfam PF07498 Rho termination factor, N-terminal domain 150 193 5.0E-14 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 XFC3_12165 e0e58741754c268ffad72f0f4ce65709 564 SMART SM00959 150 193 1.3E-13 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 XFC3_12165 e0e58741754c268ffad72f0f4ce65709 564 Hamap MF_01884 Transcription termination factor Rho [rho]. 146 564 229.529 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 XFC3_12165 e0e58741754c268ffad72f0f4ce65709 564 Gene3D G3DSA:3.40.50.300 276 563 1.5E-128 T 11-10-2018 XFC3_12165 e0e58741754c268ffad72f0f4ce65709 564 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 306 509 1.6E-22 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFC3_12165 e0e58741754c268ffad72f0f4ce65709 564 Gene3D G3DSA:1.10.720.10 147 193 1.8E-15 T 11-10-2018 XFC3_12165 e0e58741754c268ffad72f0f4ce65709 564 Pfam PF07497 Rho termination factor, RNA-binding domain 198 270 1.0E-27 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 XFC3_12165 e0e58741754c268ffad72f0f4ce65709 564 SMART SM00382 316 496 3.5E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_12165 e0e58741754c268ffad72f0f4ce65709 564 Gene3D G3DSA:2.40.50.140 194 269 2.3E-30 T 11-10-2018 XFC3_12165 e0e58741754c268ffad72f0f4ce65709 564 SMART SM00357 198 264 6.8E-15 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 XFC3_12165 e0e58741754c268ffad72f0f4ce65709 564 TIGRFAM TIGR00767 rho: transcription termination factor Rho 147 563 4.8E-207 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 XFC3_12165 e0e58741754c268ffad72f0f4ce65709 564 SUPERFAMILY SSF52540 236 517 7.16E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07155 4eea2a89e9aafaf13f00877eb105956e 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 1.2E-13 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XFC3_07155 4eea2a89e9aafaf13f00877eb105956e 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.2E-13 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XFC3_07155 4eea2a89e9aafaf13f00877eb105956e 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 1.2E-13 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XFC3_07155 4eea2a89e9aafaf13f00877eb105956e 313 Gene3D G3DSA:3.40.50.1820 1 313 6.8E-112 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_07155 4eea2a89e9aafaf13f00877eb105956e 313 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 312 1.4E-165 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 XFC3_07155 4eea2a89e9aafaf13f00877eb105956e 313 PIRSF PIRSF006431 1 313 1.1E-136 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 XFC3_07155 4eea2a89e9aafaf13f00877eb105956e 313 SUPERFAMILY SSF53474 2 301 7.03E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_07155 4eea2a89e9aafaf13f00877eb105956e 313 Pfam PF00561 alpha/beta hydrolase fold 35 298 1.6E-31 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFC3_07155 4eea2a89e9aafaf13f00877eb105956e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 4.4E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFC3_07155 4eea2a89e9aafaf13f00877eb105956e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 4.4E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFC3_07155 4eea2a89e9aafaf13f00877eb105956e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 4.4E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFC3_03470 f89489ff9d351bddb2adcb338bc04028 499 SUPERFAMILY SSF53067 4 255 6.75E-93 T 11-10-2018 XFC3_03470 f89489ff9d351bddb2adcb338bc04028 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 450 2.9E-61 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 XFC3_03470 f89489ff9d351bddb2adcb338bc04028 499 SUPERFAMILY SSF53067 255 494 4.03E-80 T 11-10-2018 XFC3_03470 f89489ff9d351bddb2adcb338bc04028 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 XFC3_03470 f89489ff9d351bddb2adcb338bc04028 499 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 494 4.4E-219 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 XFC3_03470 f89489ff9d351bddb2adcb338bc04028 499 Gene3D G3DSA:3.30.420.40 1 253 2.3E-106 T 11-10-2018 XFC3_03470 f89489ff9d351bddb2adcb338bc04028 499 PIRSF PIRSF000538 3 496 3.7E-175 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 XFC3_03470 f89489ff9d351bddb2adcb338bc04028 499 Gene3D G3DSA:3.30.420.40 254 498 9.5E-85 T 11-10-2018 XFC3_03470 f89489ff9d351bddb2adcb338bc04028 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 1.8E-81 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 XFC3_03470 f89489ff9d351bddb2adcb338bc04028 499 Hamap MF_00186 Glycerol kinase [glpK]. 3 497 58.403 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 XFC3_03470 f89489ff9d351bddb2adcb338bc04028 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 XFC3_09240 68d01966f38d6d51dbe9cb7b6d610406 825 SUPERFAMILY SSF56281 545 781 1.83E-45 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFC3_09240 68d01966f38d6d51dbe9cb7b6d610406 825 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 168 770 8.1E-106 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 XFC3_09240 68d01966f38d6d51dbe9cb7b6d610406 825 Pfam PF13567 Domain of unknown function (DUF4131) 58 216 8.4E-24 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 XFC3_09240 68d01966f38d6d51dbe9cb7b6d610406 825 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 275 451 4.4E-25 T 11-10-2018 IPR004477 ComEC/Rec2-related protein XFC3_09240 68d01966f38d6d51dbe9cb7b6d610406 825 SMART SM00849 557 742 4.3E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFC3_09240 68d01966f38d6d51dbe9cb7b6d610406 825 Pfam PF03772 Competence protein 253 520 9.1E-66 T 11-10-2018 IPR004477 ComEC/Rec2-related protein XFC3_09240 68d01966f38d6d51dbe9cb7b6d610406 825 Gene3D G3DSA:3.60.15.10 546 781 1.7E-50 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFC3_09240 68d01966f38d6d51dbe9cb7b6d610406 825 Pfam PF00753 Metallo-beta-lactamase superfamily 554 718 3.8E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFC3_00010 486c1a177d76ef84e2454f53d63e89f7 366 SMART SM00480 17 362 2.7E-131 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 XFC3_00010 486c1a177d76ef84e2454f53d63e89f7 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 3.5E-36 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 XFC3_00010 486c1a177d76ef84e2454f53d63e89f7 366 SUPERFAMILY SSF55979 246 366 1.78E-32 T 11-10-2018 XFC3_00010 486c1a177d76ef84e2454f53d63e89f7 366 Gene3D G3DSA:3.10.150.10 1 121 7.6E-40 T 11-10-2018 XFC3_00010 486c1a177d76ef84e2454f53d63e89f7 366 SUPERFAMILY SSF55979 127 244 4.65E-27 T 11-10-2018 XFC3_00010 486c1a177d76ef84e2454f53d63e89f7 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 365 1.1E-33 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 XFC3_00010 486c1a177d76ef84e2454f53d63e89f7 366 Gene3D G3DSA:3.10.150.10 122 248 4.2E-37 T 11-10-2018 XFC3_00010 486c1a177d76ef84e2454f53d63e89f7 366 Gene3D G3DSA:3.10.150.10 249 366 7.9E-36 T 11-10-2018 XFC3_00010 486c1a177d76ef84e2454f53d63e89f7 366 SUPERFAMILY SSF55979 1 116 5.83E-27 T 11-10-2018 XFC3_00010 486c1a177d76ef84e2454f53d63e89f7 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 6.2E-35 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 XFC3_00010 486c1a177d76ef84e2454f53d63e89f7 366 PIRSF PIRSF000804 1 366 1.0E-116 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 XFC3_00010 486c1a177d76ef84e2454f53d63e89f7 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.2E-106 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 XFC3_05265 6af40a1c7b12344185a87ce581f1ebda 343 SUPERFAMILY SSF46785 257 328 1.97E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_05265 6af40a1c7b12344185a87ce581f1ebda 343 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 1.9E-32 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 XFC3_05265 6af40a1c7b12344185a87ce581f1ebda 343 Gene3D G3DSA:1.10.10.10 257 335 3.4E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_05265 6af40a1c7b12344185a87ce581f1ebda 343 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 343 174.085 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 XFC3_05265 6af40a1c7b12344185a87ce581f1ebda 343 Gene3D G3DSA:1.10.8.60 182 255 1.4E-30 T 11-10-2018 XFC3_05265 6af40a1c7b12344185a87ce581f1ebda 343 Gene3D G3DSA:3.40.50.300 18 181 1.6E-37 T 11-10-2018 XFC3_05265 6af40a1c7b12344185a87ce581f1ebda 343 SMART SM00382 51 182 2.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_05265 6af40a1c7b12344185a87ce581f1ebda 343 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 235 5.7E-117 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 XFC3_05265 6af40a1c7b12344185a87ce581f1ebda 343 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 250 333 3.0E-42 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 XFC3_05265 6af40a1c7b12344185a87ce581f1ebda 343 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 23 326 2.1E-144 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 XFC3_05265 6af40a1c7b12344185a87ce581f1ebda 343 SUPERFAMILY SSF52540 20 252 1.41E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 1.8E-38 T 11-10-2018 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 216 235 1.8E-38 T 11-10-2018 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 1.8E-38 T 11-10-2018 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 1.8E-38 T 11-10-2018 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 1.8E-38 T 11-10-2018 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 2.2E-232 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 SUPERFAMILY SSF52833 105 198 2.14E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PIRSF PIRSF000238 1 521 7.2E-264 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 SUPERFAMILY SSF52833 1 103 5.93E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 SUPERFAMILY SSF51905 208 515 4.48E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 Gene3D G3DSA:3.40.30.80 1 201 8.9E-56 T 11-10-2018 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 267 277 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 215 237 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 247 262 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 Gene3D G3DSA:3.50.50.60 214 508 7.8E-110 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 Gene3D G3DSA:3.50.50.60 327 450 7.8E-110 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 Pfam PF13192 Thioredoxin domain 127 196 1.4E-8 T 11-10-2018 IPR012336 Thioredoxin-like fold XFC3_07060 25d9f66812e52fb56a578f1d3720cc24 531 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 214 504 5.0E-46 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.0E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:2.40.30.10 208 336 1.3E-52 T 11-10-2018 XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF50447 207 301 3.53E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF00009 Elongation factor Tu GTP binding domain 11 203 6.2E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 8.4E-223 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 1.2E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 5.2E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:2.40.30.10 340 395 5.2E-28 T 11-10-2018 XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF50465 304 396 1.58E-36 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:3.40.50.300 1 205 1.3E-68 T 11-10-2018 XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.146 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF52540 5 221 4.53E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11945 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.0E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:2.40.30.10 208 336 1.3E-52 T 11-10-2018 XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF50447 207 301 3.53E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF00009 Elongation factor Tu GTP binding domain 11 203 6.2E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 8.4E-223 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 1.2E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 5.2E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:2.40.30.10 340 395 5.2E-28 T 11-10-2018 XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF50465 304 396 1.58E-36 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:3.40.50.300 1 205 1.3E-68 T 11-10-2018 XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.146 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF52540 5 221 4.53E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11880 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11730 fe3fcb74b6a55ce1a1051fb73b84eefc 452 Gene3D G3DSA:1.20.1600.10 22 451 3.0E-109 T 11-10-2018 XFC3_11730 fe3fcb74b6a55ce1a1051fb73b84eefc 452 SUPERFAMILY SSF56954 24 444 3.14E-86 T 11-10-2018 XFC3_11730 fe3fcb74b6a55ce1a1051fb73b84eefc 452 Pfam PF02321 Outer membrane efflux protein 235 428 1.7E-31 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 XFC3_11730 fe3fcb74b6a55ce1a1051fb73b84eefc 452 Pfam PF02321 Outer membrane efflux protein 24 210 9.3E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 XFC3_11730 fe3fcb74b6a55ce1a1051fb73b84eefc 452 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 444 1.4E-121 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 XFC3_03340 fdc2ca3e9fe34b6475f8f03b5834a00e 284 Hamap MF_02040 Iron-sulfur cluster carrier protein. 15 266 36.983 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein XFC3_03340 fdc2ca3e9fe34b6475f8f03b5834a00e 284 SUPERFAMILY SSF52540 16 250 2.23E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_03340 fdc2ca3e9fe34b6475f8f03b5834a00e 284 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 23 263 3.0E-100 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 XFC3_03340 fdc2ca3e9fe34b6475f8f03b5834a00e 284 ProSitePatterns PS01215 Mrp family signature. 129 145 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 XFC3_03340 fdc2ca3e9fe34b6475f8f03b5834a00e 284 Gene3D G3DSA:3.40.50.300 15 261 2.6E-82 T 11-10-2018 XFC3_10775 5c3c7fc59f9b223ebe08c1eae2206088 464 Pfam PF09312 SurA N-terminal domain 33 150 1.9E-44 T 11-10-2018 IPR015391 SurA N-terminal XFC3_10775 5c3c7fc59f9b223ebe08c1eae2206088 464 Gene3D G3DSA:3.10.50.40 290 395 2.2E-66 T 11-10-2018 XFC3_10775 5c3c7fc59f9b223ebe08c1eae2206088 464 SUPERFAMILY SSF54534 292 393 8.5E-26 T 11-10-2018 XFC3_10775 5c3c7fc59f9b223ebe08c1eae2206088 464 Gene3D G3DSA:3.10.50.40 179 396 2.2E-66 T 11-10-2018 XFC3_10775 5c3c7fc59f9b223ebe08c1eae2206088 464 SUPERFAMILY SSF54534 177 280 8.5E-24 T 11-10-2018 XFC3_10775 5c3c7fc59f9b223ebe08c1eae2206088 464 Gene3D G3DSA:1.10.4030.10 30 153 5.3E-34 T 11-10-2018 XFC3_10775 5c3c7fc59f9b223ebe08c1eae2206088 464 Hamap MF_01183 Chaperone SurA [surA]. 9 437 30.287 T 11-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 XFC3_10775 5c3c7fc59f9b223ebe08c1eae2206088 464 SUPERFAMILY SSF109998 33 205 7.19E-41 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily XFC3_10775 5c3c7fc59f9b223ebe08c1eae2206088 464 Pfam PF00639 PPIC-type PPIASE domain 299 389 3.9E-25 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 XFC3_10775 5c3c7fc59f9b223ebe08c1eae2206088 464 Pfam PF00639 PPIC-type PPIASE domain 182 276 3.4E-18 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 XFC3_03040 5da900fbda9c8cf728b1ad9f2eb230f0 467 Pfam PF02706 Chain length determinant protein 20 110 9.9E-11 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 XFC3_03040 5da900fbda9c8cf728b1ad9f2eb230f0 467 Pfam PF13807 G-rich domain on putative tyrosine kinase 381 453 3.1E-15 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain XFC3_04735 c4b7ab1e6387e9a5c84534ee5711a2ef 332 PIRSF PIRSF038896 8 330 4.3E-98 T 11-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 XFC3_04735 c4b7ab1e6387e9a5c84534ee5711a2ef 332 Pfam PF12706 Beta-lactamase superfamily domain 84 285 2.7E-39 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFC3_04735 c4b7ab1e6387e9a5c84534ee5711a2ef 332 Gene3D G3DSA:3.60.15.10 33 332 1.1E-75 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFC3_04735 c4b7ab1e6387e9a5c84534ee5711a2ef 332 SUPERFAMILY SSF56281 68 297 6.68E-32 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFC3_08465 dc2ec296d764b9a53ae84827185ab12e 229 PIRSF PIRSF016262 16 225 1.8E-57 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XFC3_08465 dc2ec296d764b9a53ae84827185ab12e 229 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 84 99 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 XFC3_08465 dc2ec296d764b9a53ae84827185ab12e 229 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 88 141 2.0E-24 T 11-10-2018 XFC3_08465 dc2ec296d764b9a53ae84827185ab12e 229 Pfam PF03099 Biotin/lipoate A/B protein ligase family 74 172 9.7E-9 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 XFC3_08465 dc2ec296d764b9a53ae84827185ab12e 229 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 40 214 1.9E-62 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XFC3_08465 dc2ec296d764b9a53ae84827185ab12e 229 Hamap MF_00013 Octanoyltransferase [lipB]. 18 219 37.666 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XFC3_08465 dc2ec296d764b9a53ae84827185ab12e 229 SUPERFAMILY SSF55681 18 216 6.13E-67 T 11-10-2018 XFC3_08465 dc2ec296d764b9a53ae84827185ab12e 229 Gene3D G3DSA:3.30.930.10 15 217 1.8E-63 T 11-10-2018 XFC3_06455 53668b911381605dbf7a60124cc97df6 242 SUPERFAMILY SSF51735 33 227 4.29E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_06455 53668b911381605dbf7a60124cc97df6 242 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 34 125 2.0E-19 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal XFC3_06455 53668b911381605dbf7a60124cc97df6 242 Gene3D G3DSA:3.40.50.720 30 224 1.2E-43 T 11-10-2018 XFC3_06480 c656069a5c8c81d6e8ad8050f0651af3 356 SUPERFAMILY SSF51395 1 353 5.73E-109 T 11-10-2018 XFC3_06480 c656069a5c8c81d6e8ad8050f0651af3 356 Gene3D G3DSA:3.20.20.70 1 355 1.7E-117 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_06480 c656069a5c8c81d6e8ad8050f0651af3 356 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 1 331 2.6E-77 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 XFC3_08085 53602859e21a08bc160506398a6ac01c 416 Gene3D G3DSA:3.30.460.10 1 122 2.9E-30 T 11-10-2018 XFC3_08085 53602859e21a08bc160506398a6ac01c 416 SUPERFAMILY SSF81891 121 404 6.54E-53 T 11-10-2018 XFC3_08085 53602859e21a08bc160506398a6ac01c 416 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 409 48.811 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 XFC3_08085 53602859e21a08bc160506398a6ac01c 416 Pfam PF01966 HD domain 238 348 1.6E-4 T 11-10-2018 IPR006674 HD domain XFC3_08085 53602859e21a08bc160506398a6ac01c 416 SUPERFAMILY SSF81301 2 120 1.42E-29 T 11-10-2018 XFC3_08085 53602859e21a08bc160506398a6ac01c 416 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 213 6.0E-12 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XFC3_08085 53602859e21a08bc160506398a6ac01c 416 Gene3D G3DSA:1.10.3090.10 123 407 7.1E-43 T 11-10-2018 XFC3_08085 53602859e21a08bc160506398a6ac01c 416 PIRSF PIRSF000813 1 408 5.1E-181 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 XFC3_08085 53602859e21a08bc160506398a6ac01c 416 Pfam PF01743 Poly A polymerase head domain 4 123 1.2E-20 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XFC3_01910 8b6d251cb77fc8b0cb548dfe3a0b1f45 269 Pfam PF13181 Tetratricopeptide repeat 91 122 0.015 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_01910 8b6d251cb77fc8b0cb548dfe3a0b1f45 269 SMART SM00028 56 89 350.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_01910 8b6d251cb77fc8b0cb548dfe3a0b1f45 269 SMART SM00028 90 123 2.7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_01910 8b6d251cb77fc8b0cb548dfe3a0b1f45 269 SMART SM00028 160 193 3.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_01910 8b6d251cb77fc8b0cb548dfe3a0b1f45 269 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 14 260 8.6E-49 T 11-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW XFC3_01910 8b6d251cb77fc8b0cb548dfe3a0b1f45 269 SUPERFAMILY SSF48452 60 221 1.14E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_01910 8b6d251cb77fc8b0cb548dfe3a0b1f45 269 Gene3D G3DSA:1.25.40.10 55 266 9.1E-39 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_05285 9007228e842d7819ec4adba090f7853b 347 Gene3D G3DSA:3.30.1150.10 195 347 2.9E-14 T 11-10-2018 XFC3_05285 9007228e842d7819ec4adba090f7853b 347 Pfam PF13103 TonB C terminal 258 330 1.9E-8 T 11-10-2018 XFC3_05285 9007228e842d7819ec4adba090f7853b 347 SUPERFAMILY SSF74653 235 346 5.3E-13 T 11-10-2018 XFC3_05285 9007228e842d7819ec4adba090f7853b 347 TIGRFAM TIGR02794 tolA_full: protein TolA 20 334 4.7E-21 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 XFC3_00130 3bcb7b83b1ba3b3375b1c8cc1b63f50f 1214 Pfam PF05567 Neisseria PilC beta-propeller domain 740 1042 1.6E-57 T 11-10-2018 IPR008707 PilC beta-propeller domain XFC3_00130 3bcb7b83b1ba3b3375b1c8cc1b63f50f 1214 SUPERFAMILY SSF50998 736 1190 1.31E-8 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XFC3_00130 3bcb7b83b1ba3b3375b1c8cc1b63f50f 1214 Gene3D G3DSA:2.130.10.10 691 1033 3.3E-5 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 XFC3_09160 872470bd96123b19cd3309fbdbcf3403 237 SUPERFAMILY SSF55347 121 208 1.77E-20 T 11-10-2018 XFC3_09160 872470bd96123b19cd3309fbdbcf3403 237 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 143 160 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFC3_09160 872470bd96123b19cd3309fbdbcf3403 237 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 168 2.4E-36 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFC3_09160 872470bd96123b19cd3309fbdbcf3403 237 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 122 235 1.1E-27 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFC3_09160 872470bd96123b19cd3309fbdbcf3403 237 PIRSF PIRSF000161 3 237 7.5E-62 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFC3_09160 872470bd96123b19cd3309fbdbcf3403 237 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 237 27.636 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFC3_09160 872470bd96123b19cd3309fbdbcf3403 237 SUPERFAMILY SSF51735 4 236 1.18E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_09160 872470bd96123b19cd3309fbdbcf3403 237 Gene3D G3DSA:3.40.50.720 6 234 5.2E-58 T 11-10-2018 XFC3_09160 872470bd96123b19cd3309fbdbcf3403 237 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 119 1.1E-22 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFC3_09160 872470bd96123b19cd3309fbdbcf3403 237 Gene3D G3DSA:3.30.360.10 121 206 5.2E-58 T 11-10-2018 XFC3_03455 03b1534e802d37af8e65be6b99fb89a3 759 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 310 5.5E-121 T 11-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XFC3_03455 03b1534e802d37af8e65be6b99fb89a3 759 Gene3D G3DSA:3.20.20.210 389 757 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XFC3_03455 03b1534e802d37af8e65be6b99fb89a3 759 PIRSF PIRSF000382 1 759 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XFC3_03455 03b1534e802d37af8e65be6b99fb89a3 759 SUPERFAMILY SSF51726 4 393 2.22E-113 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XFC3_03455 03b1534e802d37af8e65be6b99fb89a3 759 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 432 754 1.8E-153 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XFC3_03455 03b1534e802d37af8e65be6b99fb89a3 759 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 759 37.449 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XFC3_03455 03b1534e802d37af8e65be6b99fb89a3 759 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 759 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XFC3_03455 03b1534e802d37af8e65be6b99fb89a3 759 SUPERFAMILY SSF51726 396 758 1.12E-119 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XFC3_03455 03b1534e802d37af8e65be6b99fb89a3 759 Gene3D G3DSA:3.20.20.210 6 524 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XFC3_08950 8b22349327f6629b7a570011e02bfc06 202 SUPERFAMILY SSF52166 10 201 9.29E-57 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 XFC3_08950 8b22349327f6629b7a570011e02bfc06 202 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 14 199 7.6E-60 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08950 8b22349327f6629b7a570011e02bfc06 202 Pfam PF00573 Ribosomal protein L4/L1 family 13 199 9.5E-52 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 XFC3_08950 8b22349327f6629b7a570011e02bfc06 202 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 202 27.319 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08950 8b22349327f6629b7a570011e02bfc06 202 Gene3D G3DSA:3.40.1370.10 7 202 2.1E-53 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 XFC3_09640 27fda4412845f06eaedc38f8e3234007 764 Gene3D G3DSA:3.40.50.10750 571 724 4.5E-84 T 11-10-2018 XFC3_09640 27fda4412845f06eaedc38f8e3234007 764 Gene3D G3DSA:3.40.50.720 162 444 7.0E-79 T 11-10-2018 XFC3_09640 27fda4412845f06eaedc38f8e3234007 764 PIRSF PIRSF036684 1 756 0.0 T 11-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 XFC3_09640 27fda4412845f06eaedc38f8e3234007 764 Pfam PF00390 Malic enzyme, N-terminal domain 20 152 2.9E-27 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 XFC3_09640 27fda4412845f06eaedc38f8e3234007 764 Pfam PF01515 Phosphate acetyl/butaryl transferase 428 748 1.2E-86 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 XFC3_09640 27fda4412845f06eaedc38f8e3234007 764 SUPERFAMILY SSF53659 428 751 9.46E-83 T 11-10-2018 XFC3_09640 27fda4412845f06eaedc38f8e3234007 764 SMART SM01274 19 152 2.7E-76 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 XFC3_09640 27fda4412845f06eaedc38f8e3234007 764 SMART SM00919 164 399 1.8E-126 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 XFC3_09640 27fda4412845f06eaedc38f8e3234007 764 Gene3D G3DSA:3.40.50.10950 445 748 4.5E-84 T 11-10-2018 XFC3_09640 27fda4412845f06eaedc38f8e3234007 764 SUPERFAMILY SSF53223 12 162 3.88E-51 T 11-10-2018 XFC3_09640 27fda4412845f06eaedc38f8e3234007 764 Gene3D G3DSA:3.40.50.10380 1 161 3.4E-67 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 XFC3_09640 27fda4412845f06eaedc38f8e3234007 764 SUPERFAMILY SSF51735 164 451 6.81E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_09640 27fda4412845f06eaedc38f8e3234007 764 Pfam PF03949 Malic enzyme, NAD binding domain 166 359 2.9E-19 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 XFC3_09085 348d9fc2d38c2e8ab9f44bcbedc2cf9a 320 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XFC3_09085 348d9fc2d38c2e8ab9f44bcbedc2cf9a 320 SUPERFAMILY SSF51391 118 314 4.19E-50 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XFC3_09085 348d9fc2d38c2e8ab9f44bcbedc2cf9a 320 Gene3D G3DSA:3.90.79.10 5 130 1.9E-32 T 11-10-2018 XFC3_09085 348d9fc2d38c2e8ab9f44bcbedc2cf9a 320 SUPERFAMILY SSF55811 8 131 1.49E-32 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XFC3_09085 348d9fc2d38c2e8ab9f44bcbedc2cf9a 320 Gene3D G3DSA:3.20.20.70 131 318 3.1E-49 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_09085 348d9fc2d38c2e8ab9f44bcbedc2cf9a 320 PRINTS PR00502 NUDIX hydrolase family signature 51 66 1.2E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XFC3_09085 348d9fc2d38c2e8ab9f44bcbedc2cf9a 320 PRINTS PR00502 NUDIX hydrolase family signature 37 51 1.2E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XFC3_09085 348d9fc2d38c2e8ab9f44bcbedc2cf9a 320 Pfam PF02581 Thiamine monophosphate synthase 136 312 1.9E-44 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XFC3_09085 348d9fc2d38c2e8ab9f44bcbedc2cf9a 320 Pfam PF00293 NUDIX domain 11 125 2.1E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XFC3_02265 374faefcd4858897647c29457bb35873 846 Gene3D G3DSA:3.40.50.2000 639 811 1.0E-27 T 11-10-2018 XFC3_02265 374faefcd4858897647c29457bb35873 846 Gene3D G3DSA:3.40.50.2000 17 396 4.9E-52 T 11-10-2018 XFC3_02265 374faefcd4858897647c29457bb35873 846 Gene3D G3DSA:3.40.50.2000 197 381 4.9E-52 T 11-10-2018 XFC3_02265 374faefcd4858897647c29457bb35873 846 SUPERFAMILY SSF53756 17 400 6.8E-62 T 11-10-2018 XFC3_02265 374faefcd4858897647c29457bb35873 846 SUPERFAMILY SSF53756 465 825 1.36E-40 T 11-10-2018 XFC3_02265 374faefcd4858897647c29457bb35873 846 Pfam PF13439 Glycosyltransferase Family 4 19 191 1.0E-11 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XFC3_02265 374faefcd4858897647c29457bb35873 846 Pfam PF00534 Glycosyl transferases group 1 220 382 7.7E-26 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 XFC3_02265 374faefcd4858897647c29457bb35873 846 Pfam PF00534 Glycosyl transferases group 1 654 795 1.7E-22 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 XFC3_11620 43bc5e63b336b3a4e7e3fe6da90bcc54 1167 SMART SM00968 521 619 1.6E-7 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 XFC3_11620 43bc5e63b336b3a4e7e3fe6da90bcc54 1167 SUPERFAMILY SSF75553 484 667 3.14E-7 T 11-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 XFC3_11620 43bc5e63b336b3a4e7e3fe6da90bcc54 1167 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1150 1.8E-67 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal XFC3_11620 43bc5e63b336b3a4e7e3fe6da90bcc54 1167 Gene3D G3DSA:3.40.50.300 1005 1167 1.2E-45 T 11-10-2018 XFC3_11620 43bc5e63b336b3a4e7e3fe6da90bcc54 1167 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1157 0.0 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 XFC3_11620 43bc5e63b336b3a4e7e3fe6da90bcc54 1167 Pfam PF06470 SMC proteins Flexible Hinge Domain 526 602 6.7E-6 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 XFC3_11620 43bc5e63b336b3a4e7e3fe6da90bcc54 1167 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1159 22.469 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 XFC3_11620 43bc5e63b336b3a4e7e3fe6da90bcc54 1167 Gene3D G3DSA:3.40.50.300 1 245 1.0E-53 T 11-10-2018 XFC3_11620 43bc5e63b336b3a4e7e3fe6da90bcc54 1167 PIRSF PIRSF005719 1 1164 3.3E-264 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein XFC3_11620 43bc5e63b336b3a4e7e3fe6da90bcc54 1167 SUPERFAMILY SSF52540 1 1159 4.34E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_12180 946688b1de5ffead4511400fbe5bc46c 484 SUPERFAMILY SSF50156 109 191 2.55E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFC3_12180 946688b1de5ffead4511400fbe5bc46c 484 SMART SM00245 181 373 4.3E-64 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XFC3_12180 946688b1de5ffead4511400fbe5bc46c 484 SUPERFAMILY SSF52096 45 375 4.47E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFC3_12180 946688b1de5ffead4511400fbe5bc46c 484 Gene3D G3DSA:3.30.750.44 58 348 2.3E-89 T 11-10-2018 XFC3_12180 946688b1de5ffead4511400fbe5bc46c 484 SMART SM00228 110 179 4.4E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFC3_12180 946688b1de5ffead4511400fbe5bc46c 484 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 63 373 5.8E-92 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 XFC3_12180 946688b1de5ffead4511400fbe5bc46c 484 Pfam PF03572 Peptidase family S41 207 370 4.4E-51 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XFC3_12180 946688b1de5ffead4511400fbe5bc46c 484 Gene3D G3DSA:3.90.226.10 196 370 2.3E-89 T 11-10-2018 XFC3_12180 946688b1de5ffead4511400fbe5bc46c 484 Pfam PF13180 PDZ domain 111 187 4.6E-12 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFC3_12180 946688b1de5ffead4511400fbe5bc46c 484 Gene3D G3DSA:2.30.42.10 110 195 2.3E-89 T 11-10-2018 XFC3_11930 fc45f41a2fe969b22e4484bfdafe88ac 185 Gene3D G3DSA:3.30.70.940 1 125 4.5E-39 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XFC3_11930 fc45f41a2fe969b22e4484bfdafe88ac 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site XFC3_11930 fc45f41a2fe969b22e4484bfdafe88ac 185 SMART SM00738 1 119 2.5E-41 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XFC3_11930 fc45f41a2fe969b22e4484bfdafe88ac 185 Gene3D G3DSA:2.30.30.30 126 184 1.9E-23 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 XFC3_11930 fc45f41a2fe969b22e4484bfdafe88ac 185 SUPERFAMILY SSF50104 129 184 6.02E-18 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily XFC3_11930 fc45f41a2fe969b22e4484bfdafe88ac 185 SMART SM00739 131 158 4.2E-4 T 11-10-2018 IPR005824 KOW XFC3_11930 fc45f41a2fe969b22e4484bfdafe88ac 185 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 4.9E-17 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XFC3_11930 fc45f41a2fe969b22e4484bfdafe88ac 185 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 4.9E-17 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XFC3_11930 fc45f41a2fe969b22e4484bfdafe88ac 185 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 4.9E-17 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XFC3_11930 fc45f41a2fe969b22e4484bfdafe88ac 185 Pfam PF02357 Transcription termination factor nusG 2 116 9.6E-23 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XFC3_11930 fc45f41a2fe969b22e4484bfdafe88ac 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 185 23.346 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XFC3_11930 fc45f41a2fe969b22e4484bfdafe88ac 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 184 5.1E-59 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XFC3_11930 fc45f41a2fe969b22e4484bfdafe88ac 185 SUPERFAMILY SSF82679 2 122 4.84E-33 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XFC3_11930 fc45f41a2fe969b22e4484bfdafe88ac 185 Pfam PF00467 KOW motif 134 164 2.4E-6 T 11-10-2018 IPR005824 KOW XFC3_11725 abf81a54678e17b8fc0844f5692b70f9 218 Gene3D G3DSA:3.40.50.150 3 209 5.3E-40 T 11-10-2018 XFC3_11725 abf81a54678e17b8fc0844f5692b70f9 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 174 2.2E-26 T 11-10-2018 XFC3_11725 abf81a54678e17b8fc0844f5692b70f9 218 SUPERFAMILY SSF53335 4 185 4.96E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 SUPERFAMILY SSF63380 234 460 4.25E-52 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 Gene3D G3DSA:3.40.50.360 59 220 4.6E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 SUPERFAMILY SSF52343 459 612 5.89E-48 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00369 Flavodoxin signature 149 159 2.8E-18 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00369 Flavodoxin signature 69 82 2.8E-18 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00369 Flavodoxin signature 173 192 2.8E-18 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00369 Flavodoxin signature 117 128 2.8E-18 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 Pfam PF00258 Flavodoxin 70 193 9.2E-33 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 Pfam PF00175 Oxidoreductase NAD-binding domain 471 576 6.1E-17 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 Gene3D G3DSA:3.40.50.80 459 612 5.0E-52 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 Gene3D G3DSA:2.40.30.10 262 453 5.3E-58 T 11-10-2018 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 SUPERFAMILY SSF52218 67 213 3.24E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 283 293 2.9E-23 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 495 504 2.9E-23 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 508 519 2.9E-23 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 434 443 2.9E-23 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 470 489 2.9E-23 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 401 408 2.9E-23 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 562 570 2.9E-23 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 539 555 2.9E-23 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 Pfam PF00667 FAD binding domain 264 439 2.4E-18 T 11-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 Gene3D G3DSA:1.20.990.10 293 399 5.3E-58 T 11-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 612 5.3E-233 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFC3_07210 907bc7140afcad5c65a00442708f6fa3 612 PIRSF PIRSF000207 1 612 6.6E-199 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 SUPERFAMILY SSF52279 373 608 3.14E-53 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 Gene3D G3DSA:3.40.50.1700 359 607 7.1E-77 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 373 605 3.2E-53 T 11-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 254 272 6.1E-19 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 82 98 6.1E-19 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 147 163 6.1E-19 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 120 6.1E-19 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 184 200 6.1E-19 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 254 271 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 Gene3D G3DSA:3.20.20.300 3 354 7.9E-114 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 15 332 1.0E-68 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 SMART SM01217 642 711 8.1E-27 T 11-10-2018 IPR026891 Fibronectin type III-like domain XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 SUPERFAMILY SSF51445 3 372 4.32E-98 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 Gene3D G3DSA:2.60.40.10 608 721 3.1E-27 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFC3_01825 441419c205f6d8ff990974c47fb1da1d 725 Pfam PF14310 Fibronectin type III-like domain 642 709 3.0E-17 T 11-10-2018 IPR026891 Fibronectin type III-like domain XFC3_11180 de495a04d2185f6733e8fd9dd79bbe94 331 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 330 2.0E-101 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 XFC3_11180 de495a04d2185f6733e8fd9dd79bbe94 331 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 87 1.8E-20 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 XFC3_11180 de495a04d2185f6733e8fd9dd79bbe94 331 SUPERFAMILY SSF55681 92 330 6.17E-81 T 11-10-2018 XFC3_11180 de495a04d2185f6733e8fd9dd79bbe94 331 SUPERFAMILY SSF46589 12 99 4.97E-19 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 XFC3_11180 de495a04d2185f6733e8fd9dd79bbe94 331 Gene3D G3DSA:3.30.930.10 7 331 9.4E-116 T 11-10-2018 XFC3_11180 de495a04d2185f6733e8fd9dd79bbe94 331 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 330 48.907 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 XFC3_11180 de495a04d2185f6733e8fd9dd79bbe94 331 Pfam PF01409 tRNA synthetases class II core domain (F) 92 330 1.4E-104 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 XFC3_09575 f1250eb0bf925a391d363540b50ea33d 418 SUPERFAMILY SSF103473 22 416 3.27E-37 T 11-10-2018 IPR036259 MFS transporter superfamily XFC3_09575 f1250eb0bf925a391d363540b50ea33d 418 Gene3D G3DSA:1.20.1250.20 19 405 6.3E-31 T 11-10-2018 XFC3_09575 f1250eb0bf925a391d363540b50ea33d 418 Pfam PF05977 Transmembrane secretion effector 18 411 1.3E-31 T 11-10-2018 IPR010290 Transmembrane secretion effector XFC3_00135 0ed8c83521a65f924039f22bdeef9952 131 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 30 1.1E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_00135 0ed8c83521a65f924039f22bdeef9952 131 Gene3D G3DSA:3.30.700.10 10 130 1.2E-22 T 11-10-2018 XFC3_00135 0ed8c83521a65f924039f22bdeef9952 131 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 3.1E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_00135 0ed8c83521a65f924039f22bdeef9952 131 PRINTS PR00885 Bacterial general secretion pathway protein H signature 5 19 1.3E-5 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 XFC3_00135 0ed8c83521a65f924039f22bdeef9952 131 PRINTS PR00885 Bacterial general secretion pathway protein H signature 20 34 1.3E-5 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 XFC3_00135 0ed8c83521a65f924039f22bdeef9952 131 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 32 116 4.3E-25 T 11-10-2018 IPR031982 Type IV minor pilin ComP XFC3_00135 0ed8c83521a65f924039f22bdeef9952 131 SUPERFAMILY SSF54523 10 125 2.12E-26 T 11-10-2018 XFC3_00400 83ded0c60ab16a8f91077dce78a06cf3 610 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 8.0E-248 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFC3_00400 83ded0c60ab16a8f91077dce78a06cf3 610 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFC3_00400 83ded0c60ab16a8f91077dce78a06cf3 610 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.435 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFC3_00400 83ded0c60ab16a8f91077dce78a06cf3 610 Gene3D G3DSA:3.50.30.80 419 570 9.2E-53 T 11-10-2018 XFC3_00400 83ded0c60ab16a8f91077dce78a06cf3 610 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFC3_00400 83ded0c60ab16a8f91077dce78a06cf3 610 SUPERFAMILY SSF52016 419 606 2.35E-59 T 11-10-2018 XFC3_00400 83ded0c60ab16a8f91077dce78a06cf3 610 SUPERFAMILY SSF143975 4 418 1.96E-135 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFC3_00400 83ded0c60ab16a8f91077dce78a06cf3 610 Pfam PF00920 Dehydratase family 34 603 8.6E-218 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFC3_01345 f1617228da71e0763c94d5579952e10a 444 Gene3D G3DSA:1.20.1440.230 342 441 2.4E-33 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01345 f1617228da71e0763c94d5579952e10a 444 Pfam PF10531 SLBB domain 257 305 1.5E-10 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01345 f1617228da71e0763c94d5579952e10a 444 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01345 f1617228da71e0763c94d5579952e10a 444 SUPERFAMILY SSF142984 255 338 3.27E-21 T 11-10-2018 XFC3_01345 f1617228da71e0763c94d5579952e10a 444 SUPERFAMILY SSF140490 339 436 1.28E-34 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01345 f1617228da71e0763c94d5579952e10a 444 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 62 233 3.4E-44 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01345 f1617228da71e0763c94d5579952e10a 444 Gene3D G3DSA:3.10.20.600 247 340 3.3E-27 T 11-10-2018 XFC3_01345 f1617228da71e0763c94d5579952e10a 444 Gene3D G3DSA:3.40.50.11540 67 245 1.4E-73 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01345 f1617228da71e0763c94d5579952e10a 444 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 429 1.4E-194 T 11-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01345 f1617228da71e0763c94d5579952e10a 444 SUPERFAMILY SSF142019 20 252 9.94E-79 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01345 f1617228da71e0763c94d5579952e10a 444 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 356 367 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01345 f1617228da71e0763c94d5579952e10a 444 SMART SM00928 343 388 3.1E-26 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01345 f1617228da71e0763c94d5579952e10a 444 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 346 426 1.8E-29 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_00250 57e76482d982d4b8619b86ea7036afc2 341 Hamap MF_01694 Biotin synthase [bioB]. 7 315 41.084 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XFC3_00250 57e76482d982d4b8619b86ea7036afc2 341 Pfam PF04055 Radical SAM superfamily 51 206 3.2E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XFC3_00250 57e76482d982d4b8619b86ea7036afc2 341 PIRSF PIRSF001619 2 321 1.3E-129 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XFC3_00250 57e76482d982d4b8619b86ea7036afc2 341 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 222 312 4.0E-20 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XFC3_00250 57e76482d982d4b8619b86ea7036afc2 341 SMART SM00729 45 251 3.5E-35 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XFC3_00250 57e76482d982d4b8619b86ea7036afc2 341 TIGRFAM TIGR00433 bioB: biotin synthase 17 312 5.8E-120 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XFC3_00250 57e76482d982d4b8619b86ea7036afc2 341 SMART SM00876 222 314 8.0E-48 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XFC3_00250 57e76482d982d4b8619b86ea7036afc2 341 Gene3D G3DSA:3.20.20.70 6 317 4.2E-124 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_00250 57e76482d982d4b8619b86ea7036afc2 341 SUPERFAMILY SSF102114 7 315 3.27E-90 T 11-10-2018 XFC3_06420 3b63900a2dc3b635a62119e77e53589b 247 SUPERFAMILY SSF51735 3 232 1.0E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_06420 3b63900a2dc3b635a62119e77e53589b 247 Gene3D G3DSA:3.40.50.720 1 242 5.0E-67 T 11-10-2018 XFC3_06420 3b63900a2dc3b635a62119e77e53589b 247 Pfam PF00106 short chain dehydrogenase 5 199 9.1E-55 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_06420 3b63900a2dc3b635a62119e77e53589b 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 181 0.0028 T 11-10-2018 XFC3_06420 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_06420 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_06420 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_06420 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_06420 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_06420 3b63900a2dc3b635a62119e77e53589b 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XFC3_09300 96d93a4198175137acb4febb02c1228c 477 PIRSF PIRSF000110 1 470 3.8E-156 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFC3_09300 96d93a4198175137acb4febb02c1228c 477 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 3 465 1.1E-134 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFC3_09300 96d93a4198175137acb4febb02c1228c 477 SUPERFAMILY SSF51735 3 179 9.25E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_09300 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 156 184 3.7E-40 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFC3_09300 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 226 242 3.7E-40 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFC3_09300 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 132 145 3.7E-40 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFC3_09300 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 208 225 3.7E-40 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFC3_09300 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 313 339 3.7E-40 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFC3_09300 96d93a4198175137acb4febb02c1228c 477 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 7 176 2.3E-41 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFC3_09300 96d93a4198175137acb4febb02c1228c 477 Gene3D G3DSA:3.30.360.10 166 461 5.9E-141 T 11-10-2018 XFC3_09300 96d93a4198175137acb4febb02c1228c 477 Gene3D G3DSA:3.40.50.720 5 422 5.9E-141 T 11-10-2018 XFC3_09300 96d93a4198175137acb4febb02c1228c 477 SUPERFAMILY SSF55347 171 468 2.62E-97 T 11-10-2018 XFC3_09300 96d93a4198175137acb4febb02c1228c 477 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 179 465 1.8E-94 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFC3_09300 96d93a4198175137acb4febb02c1228c 477 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 2 474 66.699 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFC3_08755 c93624fa1c656be974daf1b771cf7395 341 Pfam PF04332 Protein of unknown function (DUF475) 49 339 1.8E-133 T 11-10-2018 IPR007427 Protein of unknown function DUF475 XFC3_06495 9f2f0b8c8dc7782363f599c816199412 353 Gene3D G3DSA:3.90.180.10 18 340 1.7E-87 T 11-10-2018 XFC3_06495 9f2f0b8c8dc7782363f599c816199412 353 SUPERFAMILY SSF50129 1 182 5.33E-41 T 11-10-2018 IPR011032 GroES-like superfamily XFC3_06495 9f2f0b8c8dc7782363f599c816199412 353 SMART SM00829 10 347 2.9E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XFC3_06495 9f2f0b8c8dc7782363f599c816199412 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XFC3_06495 9f2f0b8c8dc7782363f599c816199412 353 SUPERFAMILY SSF51735 140 314 6.57E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_06495 9f2f0b8c8dc7782363f599c816199412 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 126 9.4E-17 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XFC3_06495 9f2f0b8c8dc7782363f599c816199412 353 Gene3D G3DSA:3.40.50.720 162 294 1.7E-87 T 11-10-2018 XFC3_06495 9f2f0b8c8dc7782363f599c816199412 353 Pfam PF00107 Zinc-binding dehydrogenase 177 303 3.8E-16 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XFC3_02240 9001b6c06de8a721a231632c799ae32a 130 Gene3D G3DSA:1.20.1270.390 31 128 1.0E-9 T 11-10-2018 XFC3_02240 9001b6c06de8a721a231632c799ae32a 130 Pfam PF14346 Domain of unknown function (DUF4398) 24 121 2.5E-18 T 11-10-2018 IPR025511 Domain of unknown function DUF4398 XFC3_09965 079c3b2dc337991df4163343c589b357 93 Pfam PF13744 Helix-turn-helix domain 12 93 1.3E-17 T 11-10-2018 IPR039554 HigA2-like, helix-turn-helix domain XFC3_09965 079c3b2dc337991df4163343c589b357 93 SUPERFAMILY SSF47413 22 93 4.29E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_09965 079c3b2dc337991df4163343c589b357 93 Gene3D G3DSA:1.10.260.40 9 93 5.3E-19 T 11-10-2018 XFC3_07485 079c3b2dc337991df4163343c589b357 93 Pfam PF13744 Helix-turn-helix domain 12 93 1.3E-17 T 11-10-2018 IPR039554 HigA2-like, helix-turn-helix domain XFC3_07485 079c3b2dc337991df4163343c589b357 93 SUPERFAMILY SSF47413 22 93 4.29E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_07485 079c3b2dc337991df4163343c589b357 93 Gene3D G3DSA:1.10.260.40 9 93 5.3E-19 T 11-10-2018 XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 SUPERFAMILY SSF55021 321 395 6.41E-19 T 11-10-2018 XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 SUPERFAMILY SSF53633 20 314 3.67E-73 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 Gene3D G3DSA:3.40.1160.10 20 315 1.0E-91 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 Pfam PF00742 Homoserine dehydrogenase 629 825 1.0E-50 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 ProSitePatterns PS00324 Aspartokinase signature. 22 30 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 Gene3D G3DSA:3.30.2130.10 318 475 1.2E-44 T 11-10-2018 XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 487 621 3.5E-22 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 675 697 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 Gene3D G3DSA:3.40.50.720 482 828 1.5E-123 T 11-10-2018 XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 PIRSF PIRSF000727 20 832 0.0 T 11-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 SUPERFAMILY SSF51735 479 651 1.16E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 SUPERFAMILY SSF55021 402 490 4.44E-22 T 11-10-2018 XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 Pfam PF00696 Amino acid kinase family 20 300 8.9E-46 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 Gene3D G3DSA:3.30.360.10 640 810 1.5E-123 T 11-10-2018 XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 20 474 2.8E-108 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 Pfam PF13840 ACT domain 409 469 3.3E-7 T 11-10-2018 IPR027795 CASTOR, ACT domain XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 Pfam PF13840 ACT domain 328 389 1.9E-7 T 11-10-2018 IPR027795 CASTOR, ACT domain XFC3_03645 6572445314bf447d46d22c26c4982f4c 835 SUPERFAMILY SSF55347 629 812 1.5E-48 T 11-10-2018 XFC3_04410 1c0fa9732a0af189ec0c5c7f995e01b6 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 625 41.473 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 XFC3_04410 1c0fa9732a0af189ec0c5c7f995e01b6 629 Pfam PF01134 Glucose inhibited division protein A 9 398 6.6E-162 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 XFC3_04410 1c0fa9732a0af189ec0c5c7f995e01b6 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 XFC3_04410 1c0fa9732a0af189ec0c5c7f995e01b6 629 Pfam PF13932 GidA associated domain 403 617 7.1E-72 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 XFC3_04410 1c0fa9732a0af189ec0c5c7f995e01b6 629 Gene3D G3DSA:3.50.50.60 3 232 6.4E-84 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_04410 1c0fa9732a0af189ec0c5c7f995e01b6 629 Gene3D G3DSA:3.50.50.60 309 459 5.9E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_04410 1c0fa9732a0af189ec0c5c7f995e01b6 629 Gene3D G3DSA:1.10.150.570 570 622 1.9E-22 T 11-10-2018 XFC3_04410 1c0fa9732a0af189ec0c5c7f995e01b6 629 SUPERFAMILY SSF51905 8 262 1.33E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_04410 1c0fa9732a0af189ec0c5c7f995e01b6 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 XFC3_04410 1c0fa9732a0af189ec0c5c7f995e01b6 629 SMART SM01228 547 618 6.5E-40 T 11-10-2018 XFC3_04410 1c0fa9732a0af189ec0c5c7f995e01b6 629 Gene3D G3DSA:1.10.10.1800 460 551 5.6E-25 T 11-10-2018 XFC3_04410 1c0fa9732a0af189ec0c5c7f995e01b6 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 622 1.9E-264 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 XFC3_12015 809ce50a393507a73f5a881ac0642955 724 SUPERFAMILY SSF53335 414 720 5.47E-56 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_12015 809ce50a393507a73f5a881ac0642955 724 Gene3D G3DSA:3.30.2130.30 4 273 8.0E-122 T 11-10-2018 XFC3_12015 809ce50a393507a73f5a881ac0642955 724 PIRSF PIRSF037618 1 724 1.0E-254 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 XFC3_12015 809ce50a393507a73f5a881ac0642955 724 SUPERFAMILY SSF53335 143 389 1.62E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_12015 809ce50a393507a73f5a881ac0642955 724 Gene3D G3DSA:3.40.50.150 168 385 8.0E-122 T 11-10-2018 XFC3_12015 809ce50a393507a73f5a881ac0642955 724 SMART SM00981 55 153 2.6E-21 T 11-10-2018 IPR004114 THUMP domain GO:0003723 XFC3_12015 809ce50a393507a73f5a881ac0642955 724 Pfam PF02926 THUMP domain 30 152 1.1E-10 T 11-10-2018 IPR004114 THUMP domain GO:0003723 XFC3_12015 809ce50a393507a73f5a881ac0642955 724 Gene3D G3DSA:3.40.50.150 509 723 5.0E-62 T 11-10-2018 XFC3_12015 809ce50a393507a73f5a881ac0642955 724 Pfam PF01170 Putative RNA methylase family UPF0020 161 387 3.3E-35 T 11-10-2018 IPR000241 Putative RNA methylase domain XFC3_12015 809ce50a393507a73f5a881ac0642955 724 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 502 676 9.6E-17 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 XFC3_12015 809ce50a393507a73f5a881ac0642955 724 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 3 724 28.548 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 XFC3_12015 809ce50a393507a73f5a881ac0642955 724 Gene3D G3DSA:3.30.750.80 410 508 1.7E-30 T 11-10-2018 XFC3_12015 809ce50a393507a73f5a881ac0642955 724 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 198 209 - T 11-10-2018 IPR000241 Putative RNA methylase domain XFC3_04560 9bcb2cfe73dcea1e7a65606fcb4eea7e 102 Gene3D G3DSA:3.30.2310.20 8 102 4.4E-28 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XFC3_04560 9bcb2cfe73dcea1e7a65606fcb4eea7e 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 10 100 2.5E-20 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XFC3_04560 9bcb2cfe73dcea1e7a65606fcb4eea7e 102 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 9 99 5.9E-9 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XFC3_10945 ab35f9c1ee8b3b0bea8253e7acb95a92 491 SUPERFAMILY SSF53244 328 482 4.19E-46 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFC3_10945 ab35f9c1ee8b3b0bea8253e7acb95a92 491 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 481 34.134 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 XFC3_10945 ab35f9c1ee8b3b0bea8253e7acb95a92 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 411 2.4E-18 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XFC3_10945 ab35f9c1ee8b3b0bea8253e7acb95a92 491 Pfam PF01225 Mur ligase family, catalytic domain 18 92 6.6E-10 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XFC3_10945 ab35f9c1ee8b3b0bea8253e7acb95a92 491 Gene3D G3DSA:3.90.190.20 336 490 3.2E-55 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFC3_10945 ab35f9c1ee8b3b0bea8253e7acb95a92 491 Gene3D G3DSA:3.40.1190.10 96 331 7.3E-81 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFC3_10945 ab35f9c1ee8b3b0bea8253e7acb95a92 491 Pfam PF08245 Mur ligase middle domain 105 307 1.3E-47 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XFC3_10945 ab35f9c1ee8b3b0bea8253e7acb95a92 491 SUPERFAMILY SSF53623 96 327 5.63E-77 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFC3_10945 ab35f9c1ee8b3b0bea8253e7acb95a92 491 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 16 481 9.6E-150 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 XFC3_10945 ab35f9c1ee8b3b0bea8253e7acb95a92 491 Gene3D G3DSA:3.40.1390.10 3 95 9.0E-19 T 11-10-2018 XFC3_10945 ab35f9c1ee8b3b0bea8253e7acb95a92 491 SUPERFAMILY SSF63418 3 96 4.71E-19 T 11-10-2018 IPR035911 MurE/MurF, N-terminal XFC3_02535 e4f12309a51bd3b3926974bf97268ea6 79 Pfam PF00550 Phosphopantetheine attachment site 7 73 3.7E-14 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain XFC3_02535 e4f12309a51bd3b3926974bf97268ea6 79 Gene3D G3DSA:1.10.1200.10 1 78 2.7E-27 T 11-10-2018 IPR036736 ACP-like superfamily XFC3_02535 e4f12309a51bd3b3926974bf97268ea6 79 SUPERFAMILY SSF47336 1 76 1.2E-20 T 11-10-2018 IPR036736 ACP-like superfamily XFC3_02535 e4f12309a51bd3b3926974bf97268ea6 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site XFC3_02535 e4f12309a51bd3b3926974bf97268ea6 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 4.0E-32 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 XFC3_02535 e4f12309a51bd3b3926974bf97268ea6 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 73 3.0E-12 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 XFC3_02535 e4f12309a51bd3b3926974bf97268ea6 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.103 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 SUPERFAMILY SSF53738 4 168 4.71E-45 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 1.0E-43 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 Gene3D G3DSA:3.40.120.10 176 363 3.1E-62 T 11-10-2018 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 387 444 3.0E-10 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 365 1.7E-29 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 447 44.983 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 256 2.2E-18 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 SUPERFAMILY SSF55957 360 447 3.79E-17 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 SUPERFAMILY SSF53738 158 258 2.51E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 Gene3D G3DSA:3.40.120.10 3 156 7.4E-48 T 11-10-2018 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 Gene3D G3DSA:3.40.120.10 259 341 3.1E-62 T 11-10-2018 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 SUPERFAMILY SSF53738 260 364 1.73E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 Gene3D G3DSA:3.30.310.50 372 448 8.0E-18 T 11-10-2018 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 5.2E-14 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 5.2E-14 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 5.2E-14 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_07630 bb5e8f80ecbbe02e29ea23a839b6f659 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 445 8.5E-203 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_11645 98722d3bd4df6d088b2cdf39f72550f4 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 7.4E-194 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 XFC3_11645 98722d3bd4df6d088b2cdf39f72550f4 466 SUPERFAMILY SSF55681 98 464 9.74E-95 T 11-10-2018 XFC3_11645 98722d3bd4df6d088b2cdf39f72550f4 466 Gene3D G3DSA:3.30.930.10 108 464 2.0E-107 T 11-10-2018 XFC3_11645 98722d3bd4df6d088b2cdf39f72550f4 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 5.7E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_11645 98722d3bd4df6d088b2cdf39f72550f4 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 5.7E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_11645 98722d3bd4df6d088b2cdf39f72550f4 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 5.7E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_11645 98722d3bd4df6d088b2cdf39f72550f4 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 5.7E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_11645 98722d3bd4df6d088b2cdf39f72550f4 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 459 3.7E-82 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_11645 98722d3bd4df6d088b2cdf39f72550f4 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.287 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 XFC3_11645 98722d3bd4df6d088b2cdf39f72550f4 466 Gene3D G3DSA:2.40.50.140 2 105 2.1E-18 T 11-10-2018 XFC3_11645 98722d3bd4df6d088b2cdf39f72550f4 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 4.8E-10 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XFC3_11645 98722d3bd4df6d088b2cdf39f72550f4 466 SUPERFAMILY SSF50249 15 102 2.57E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_09910 076fc8e33d3c6ac63b75a13439b959bd 72 Pfam PF05489 Phage Tail Protein X 4 64 7.3E-29 T 11-10-2018 IPR008861 Phage Tail Protein X-like XFC3_09910 076fc8e33d3c6ac63b75a13439b959bd 72 Gene3D G3DSA:3.10.350.10 5 72 4.5E-19 T 11-10-2018 IPR036779 LysM domain superfamily XFC3_07540 076fc8e33d3c6ac63b75a13439b959bd 72 Pfam PF05489 Phage Tail Protein X 4 64 7.3E-29 T 11-10-2018 IPR008861 Phage Tail Protein X-like XFC3_07540 076fc8e33d3c6ac63b75a13439b959bd 72 Gene3D G3DSA:3.10.350.10 5 72 4.5E-19 T 11-10-2018 IPR036779 LysM domain superfamily XFC3_11220 076fc8e33d3c6ac63b75a13439b959bd 72 Pfam PF05489 Phage Tail Protein X 4 64 7.3E-29 T 11-10-2018 IPR008861 Phage Tail Protein X-like XFC3_11220 076fc8e33d3c6ac63b75a13439b959bd 72 Gene3D G3DSA:3.10.350.10 5 72 4.5E-19 T 11-10-2018 IPR036779 LysM domain superfamily XFC3_12025 29782e711b7ffda564daf9550312acb7 189 SMART SM00644 16 159 3.0E-29 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XFC3_12025 29782e711b7ffda564daf9550312acb7 189 Gene3D G3DSA:3.40.80.10 17 183 1.5E-30 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XFC3_12025 29782e711b7ffda564daf9550312acb7 189 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 26 170 6.7E-22 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XFC3_12025 29782e711b7ffda564daf9550312acb7 189 SUPERFAMILY SSF55846 21 181 7.72E-33 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XFC3_10310 922dbbdf811a8b686a17782ca04ef49b 292 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 8 251 36.007 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD XFC3_10310 922dbbdf811a8b686a17782ca04ef49b 292 Pfam PF13525 Outer membrane lipoprotein 39 244 3.4E-57 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like XFC3_10310 922dbbdf811a8b686a17782ca04ef49b 292 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 13 257 3.7E-80 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD XFC3_10310 922dbbdf811a8b686a17782ca04ef49b 292 Gene3D G3DSA:1.25.40.10 40 261 1.8E-54 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_10310 922dbbdf811a8b686a17782ca04ef49b 292 SUPERFAMILY SSF48452 41 173 8.19E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_03205 f07d4e6f8149f6020dc4d34579727c31 513 Pfam PF00561 alpha/beta hydrolase fold 102 329 3.9E-16 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFC3_03205 f07d4e6f8149f6020dc4d34579727c31 513 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 103 111 1.9E-5 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XFC3_03205 f07d4e6f8149f6020dc4d34579727c31 513 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 134 145 1.9E-5 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XFC3_03205 f07d4e6f8149f6020dc4d34579727c31 513 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 214 228 1.9E-5 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XFC3_03205 f07d4e6f8149f6020dc4d34579727c31 513 SUPERFAMILY SSF53474 93 469 5.4E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_03205 f07d4e6f8149f6020dc4d34579727c31 513 Pfam PF08386 TAP-like protein 396 495 3.9E-20 T 11-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal XFC3_00795 7b6af5be6cef03543b50760d3db60bea 277 TIGRFAM TIGR00444 mazG: MazG family protein 17 267 2.0E-78 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG XFC3_00795 7b6af5be6cef03543b50760d3db60bea 277 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 34 107 1.3E-27 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core XFC3_00795 7b6af5be6cef03543b50760d3db60bea 277 SUPERFAMILY SSF101386 10 111 3.74E-24 T 11-10-2018 XFC3_00795 7b6af5be6cef03543b50760d3db60bea 277 SUPERFAMILY SSF101386 147 246 5.61E-8 T 11-10-2018 XFC3_00795 7b6af5be6cef03543b50760d3db60bea 277 Gene3D G3DSA:1.10.287.1080 138 273 2.6E-27 T 11-10-2018 XFC3_00795 7b6af5be6cef03543b50760d3db60bea 277 Gene3D G3DSA:1.10.287.1080 8 132 5.2E-44 T 11-10-2018 XFC3_03940 2827a8c71f3b713ebacbb30b417c9513 222 SUPERFAMILY SSF52374 4 217 6.19E-44 T 11-10-2018 XFC3_03940 2827a8c71f3b713ebacbb30b417c9513 222 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 217 25.341 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XFC3_03940 2827a8c71f3b713ebacbb30b417c9513 222 Pfam PF01467 Cytidylyltransferase-like 7 191 7.3E-36 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XFC3_03940 2827a8c71f3b713ebacbb30b417c9513 222 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 63 2.2E-9 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XFC3_03940 2827a8c71f3b713ebacbb30b417c9513 222 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 216 2.0E-57 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XFC3_03940 2827a8c71f3b713ebacbb30b417c9513 222 Gene3D G3DSA:3.40.50.620 5 221 1.5E-52 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 421 549 0.035 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 Gene3D G3DSA:3.90.480.10 69 159 5.0E-25 T 11-10-2018 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 7 550 2.9E-280 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 SUPERFAMILY SSF55124 335 412 5.72E-16 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 1 561 54.734 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 SUPERFAMILY SSF56014 421 551 8.11E-33 T 11-10-2018 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 PRINTS PR00397 Sirohaem Fe-binding site signature 421 439 2.1E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 PRINTS PR00397 Sirohaem Fe-binding site signature 469 487 2.1E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 Gene3D G3DSA:3.30.413.10 417 552 5.9E-35 T 11-10-2018 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 Gene3D G3DSA:3.30.413.10 192 329 1.8E-39 T 11-10-2018 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 SUPERFAMILY SSF55124 3 135 9.16E-30 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 162 317 3.9E-43 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 469 485 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 SUPERFAMILY SSF56014 136 333 2.75E-53 T 11-10-2018 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 340 405 5.7E-13 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFC3_07215 3925d0e8236f1dbe935789815c8aaa2c 568 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 64 127 3.5E-16 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFC3_00975 aac984724ff8553b945976c0d0894e43 281 Gene3D G3DSA:3.30.1300.10 180 281 6.1E-27 T 11-10-2018 XFC3_00975 aac984724ff8553b945976c0d0894e43 281 Gene3D G3DSA:3.40.50.620 1 179 1.2E-68 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_00975 aac984724ff8553b945976c0d0894e43 281 SUPERFAMILY SSF52374 3 280 6.66E-98 T 11-10-2018 XFC3_00975 aac984724ff8553b945976c0d0894e43 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 4 279 4.3E-86 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 XFC3_00975 aac984724ff8553b945976c0d0894e43 281 Pfam PF02569 Pantoate-beta-alanine ligase 5 279 2.0E-93 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 XFC3_00975 aac984724ff8553b945976c0d0894e43 281 Hamap MF_00158 Pantothenate synthetase [panC]. 3 281 37.628 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 XFC3_12600 269d48511a0cb00282a8dac1612ab7ad 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 46 8.2E-26 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_12600 269d48511a0cb00282a8dac1612ab7ad 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 16.576 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_12600 269d48511a0cb00282a8dac1612ab7ad 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_12600 269d48511a0cb00282a8dac1612ab7ad 46 Pfam PF00468 Ribosomal protein L34 3 46 7.8E-26 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_12600 269d48511a0cb00282a8dac1612ab7ad 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 28 7.0E-8 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_01405 b6d7e9af420ccbd1db5edab90d1d3d1f 231 Gene3D G3DSA:3.40.50.2300 1 121 4.2E-34 T 11-10-2018 XFC3_01405 b6d7e9af420ccbd1db5edab90d1d3d1f 231 Pfam PF00072 Response regulator receiver domain 4 111 3.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_01405 b6d7e9af420ccbd1db5edab90d1d3d1f 231 SMART SM00862 145 218 4.7E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFC3_01405 b6d7e9af420ccbd1db5edab90d1d3d1f 231 SUPERFAMILY SSF52172 1 179 3.56E-37 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_01405 b6d7e9af420ccbd1db5edab90d1d3d1f 231 SMART SM00448 1 112 7.8E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_01405 b6d7e9af420ccbd1db5edab90d1d3d1f 231 Gene3D G3DSA:1.10.10.10 122 228 7.8E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_01405 b6d7e9af420ccbd1db5edab90d1d3d1f 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 217 8.5E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFC3_04955 15a1565f0095128c3107b07599e60e97 155 Pfam PF00588 SpoU rRNA Methylase family 8 145 1.8E-31 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 XFC3_04955 15a1565f0095128c3107b07599e60e97 155 PIRSF PIRSF029256 5 155 7.0E-62 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 XFC3_04955 15a1565f0095128c3107b07599e60e97 155 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 6 155 32.138 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 XFC3_04955 15a1565f0095128c3107b07599e60e97 155 Gene3D G3DSA:3.40.1280.10 2 155 8.5E-61 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XFC3_04955 15a1565f0095128c3107b07599e60e97 155 SUPERFAMILY SSF75217 8 154 7.19E-43 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases XFC3_02950 0dffd000dafc4aa177a84d00d6ef4718 720 Gene3D G3DSA:1.20.1560.10 152 465 2.3E-76 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XFC3_02950 0dffd000dafc4aa177a84d00d6ef4718 720 SMART SM00382 505 691 1.3E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_02950 0dffd000dafc4aa177a84d00d6ef4718 720 Gene3D G3DSA:3.90.70.10 21 148 1.6E-23 T 11-10-2018 XFC3_02950 0dffd000dafc4aa177a84d00d6ef4718 720 Gene3D G3DSA:3.40.50.300 474 718 1.4E-91 T 11-10-2018 XFC3_02950 0dffd000dafc4aa177a84d00d6ef4718 720 Pfam PF03412 Peptidase C39 family 18 140 4.8E-12 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 XFC3_02950 0dffd000dafc4aa177a84d00d6ef4718 720 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 24 717 0.0 T 11-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 XFC3_02950 0dffd000dafc4aa177a84d00d6ef4718 720 ProSitePatterns PS00211 ABC transporters family signature. 617 631 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_02950 0dffd000dafc4aa177a84d00d6ef4718 720 Pfam PF00664 ABC transporter transmembrane region 168 434 5.2E-52 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XFC3_02950 0dffd000dafc4aa177a84d00d6ef4718 720 SUPERFAMILY SSF52540 469 716 1.54E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02950 0dffd000dafc4aa177a84d00d6ef4718 720 SUPERFAMILY SSF90123 153 460 4.97E-66 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XFC3_02950 0dffd000dafc4aa177a84d00d6ef4718 720 Pfam PF00005 ABC transporter 497 645 3.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_05180 fdb6d6084bb91917610fa5956e407eef 92 SUPERFAMILY SSF48295 4 88 1.1E-19 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XFC3_05180 fdb6d6084bb91917610fa5956e407eef 92 PIRSF PIRSF003196 1 92 1.3E-30 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XFC3_05180 fdb6d6084bb91917610fa5956e407eef 92 Pfam PF01371 Trp repressor protein 5 89 3.7E-27 T 11-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 XFC3_05180 fdb6d6084bb91917610fa5956e407eef 92 TIGRFAM TIGR01321 TrpR: trp operon repressor 2 90 2.2E-39 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XFC3_05180 fdb6d6084bb91917610fa5956e407eef 92 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 7 86 2.0E-6 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XFC3_05180 fdb6d6084bb91917610fa5956e407eef 92 Gene3D G3DSA:1.10.1270.10 1 91 1.6E-23 T 11-10-2018 IPR038116 TrpR-like superfamily XFC3_05180 fdb6d6084bb91917610fa5956e407eef 92 Hamap MF_00475 Trp operon repressor [trpR]. 3 92 15.924 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XFC3_04990 6c1563f6b298a0f7cdd634486e5b1354 545 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 38 53 - T 11-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 XFC3_04990 6c1563f6b298a0f7cdd634486e5b1354 545 Gene3D G3DSA:3.40.50.620 267 545 9.6E-109 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_04990 6c1563f6b298a0f7cdd634486e5b1354 545 SUPERFAMILY SSF56317 4 245 2.88E-60 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XFC3_04990 6c1563f6b298a0f7cdd634486e5b1354 545 Pfam PF00795 Carbon-nitrogen hydrolase 6 244 1.2E-24 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 XFC3_04990 6c1563f6b298a0f7cdd634486e5b1354 545 SUPERFAMILY SSF52402 268 528 9.26E-73 T 11-10-2018 XFC3_04990 6c1563f6b298a0f7cdd634486e5b1354 545 Gene3D G3DSA:3.60.110.10 1 254 6.0E-83 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XFC3_04990 6c1563f6b298a0f7cdd634486e5b1354 545 PIRSF PIRSF006630 2 545 7.0E-179 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XFC3_04990 6c1563f6b298a0f7cdd634486e5b1354 545 TIGRFAM TIGR00552 nadE: NAD+ synthetase 277 526 1.6E-57 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 XFC3_04990 6c1563f6b298a0f7cdd634486e5b1354 545 Pfam PF02540 NAD synthase 270 520 4.3E-68 T 11-10-2018 IPR022310 NAD/GMP synthase XFC3_04990 6c1563f6b298a0f7cdd634486e5b1354 545 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 545 28.773 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XFC3_06450 fd2bb41ac7e0cb3ec68034be172d4912 441 SUPERFAMILY SSF103473 30 430 3.79E-23 T 11-10-2018 IPR036259 MFS transporter superfamily XFC3_06450 fd2bb41ac7e0cb3ec68034be172d4912 441 Gene3D G3DSA:1.20.1250.20 27 422 3.9E-13 T 11-10-2018 XFC3_10000 6bc4fa4c2cb2a6e72566caaf95a4890b 626 Pfam PF05065 Phage capsid family 357 623 2.6E-50 T 11-10-2018 IPR024455 Phage capsid XFC3_10000 6bc4fa4c2cb2a6e72566caaf95a4890b 626 Pfam PF04586 Caudovirus prohead serine protease 69 163 7.9E-6 T 11-10-2018 IPR006433 Prohead protease XFC3_10000 6bc4fa4c2cb2a6e72566caaf95a4890b 626 SUPERFAMILY SSF56563 354 623 4.58E-42 T 11-10-2018 XFC3_10000 6bc4fa4c2cb2a6e72566caaf95a4890b 626 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 335 622 1.6E-30 T 11-10-2018 IPR024455 Phage capsid XFC3_11305 6bc4fa4c2cb2a6e72566caaf95a4890b 626 Pfam PF05065 Phage capsid family 357 623 2.6E-50 T 11-10-2018 IPR024455 Phage capsid XFC3_11305 6bc4fa4c2cb2a6e72566caaf95a4890b 626 Pfam PF04586 Caudovirus prohead serine protease 69 163 7.9E-6 T 11-10-2018 IPR006433 Prohead protease XFC3_11305 6bc4fa4c2cb2a6e72566caaf95a4890b 626 SUPERFAMILY SSF56563 354 623 4.58E-42 T 11-10-2018 XFC3_11305 6bc4fa4c2cb2a6e72566caaf95a4890b 626 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 335 622 1.6E-30 T 11-10-2018 IPR024455 Phage capsid XFC3_07450 6bc4fa4c2cb2a6e72566caaf95a4890b 626 Pfam PF05065 Phage capsid family 357 623 2.6E-50 T 11-10-2018 IPR024455 Phage capsid XFC3_07450 6bc4fa4c2cb2a6e72566caaf95a4890b 626 Pfam PF04586 Caudovirus prohead serine protease 69 163 7.9E-6 T 11-10-2018 IPR006433 Prohead protease XFC3_07450 6bc4fa4c2cb2a6e72566caaf95a4890b 626 SUPERFAMILY SSF56563 354 623 4.58E-42 T 11-10-2018 XFC3_07450 6bc4fa4c2cb2a6e72566caaf95a4890b 626 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 335 622 1.6E-30 T 11-10-2018 IPR024455 Phage capsid XFC3_10695 58cf63a6d4264bf7594b3011faeb26bc 204 Pfam PF09335 SNARE associated Golgi protein 40 163 8.6E-9 T 11-10-2018 IPR032816 SNARE associated Golgi protein XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Pfam PF00575 S1 RNA binding domain 620 691 3.5E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 PIRSF PIRSF005499 1 699 3.1E-293 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SUPERFAMILY SSF54791 556 640 1.31E-22 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 321 4.0E-14 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Gene3D G3DSA:3.30.230.70 233 550 4.6E-114 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Gene3D G3DSA:3.30.230.70 1 229 4.2E-78 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Pfam PF03725 3' exoribonuclease family, domain 2 460 528 4.8E-6 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 5.1E-10 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SMART SM00316 621 691 6.0E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SUPERFAMILY SSF55666 451 550 1.82E-28 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SUPERFAMILY SSF50249 612 694 2.22E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Gene3D G3DSA:2.40.50.140 623 695 6.3E-29 T 11-10-2018 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 694 30.364 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SUPERFAMILY SSF55666 144 235 2.52E-27 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 3.0E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 8.1E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SUPERFAMILY SSF54211 296 489 3.34E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SUPERFAMILY SSF54211 4 143 1.97E-49 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SUPERFAMILY SSF46915 238 321 8.37E-15 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SMART SM00322 553 618 1.3E-10 T 11-10-2018 IPR004087 K Homology domain GO:0003676 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 693 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Pfam PF00013 KH domain 558 614 1.0E-9 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 XFC3_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Gene3D G3DSA:3.30.1370.10 551 622 1.4E-19 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 XFC3_03085 54727835052206c9759415d46a84db67 236 Gene3D G3DSA:1.20.120.160 138 236 8.6E-16 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFC3_03085 54727835052206c9759415d46a84db67 236 SMART SM00448 10 117 1.1E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_03085 54727835052206c9759415d46a84db67 236 Pfam PF00072 Response regulator receiver domain 13 118 1.7E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_03085 54727835052206c9759415d46a84db67 236 Pfam PF01627 Hpt domain 161 234 1.2E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFC3_03085 54727835052206c9759415d46a84db67 236 Gene3D G3DSA:3.40.50.2300 5 130 1.1E-19 T 11-10-2018 XFC3_03085 54727835052206c9759415d46a84db67 236 SUPERFAMILY SSF52172 10 129 1.1E-22 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_03085 54727835052206c9759415d46a84db67 236 SUPERFAMILY SSF47226 103 222 1.96E-12 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFC3_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 SUPERFAMILY SSF53067 190 350 2.96E-21 T 11-10-2018 XFC3_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 SUPERFAMILY SSF53067 57 173 1.46E-9 T 11-10-2018 XFC3_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 Pfam PF11104 Type IV pilus assembly protein PilM; 13 351 1.3E-129 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM XFC3_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 7 351 6.3E-151 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM XFC3_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 Gene3D G3DSA:3.30.420.40 12 349 4.9E-83 T 11-10-2018 XFC3_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 Gene3D G3DSA:3.30.420.40 188 315 4.9E-83 T 11-10-2018 XFC3_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 Gene3D G3DSA:3.30.1490.300 87 146 4.9E-83 T 11-10-2018 XFC3_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 PIRSF PIRSF019169 1 352 6.9E-128 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM XFC3_05990 a32bcc954c1e8e84cff4e8abc108758d 143 Pfam PF02566 OsmC-like protein 44 137 2.8E-16 T 11-10-2018 IPR003718 OsmC/Ohr family XFC3_05990 a32bcc954c1e8e84cff4e8abc108758d 143 Gene3D G3DSA:2.20.25.10 1 48 4.6E-24 T 11-10-2018 XFC3_05990 a32bcc954c1e8e84cff4e8abc108758d 143 SUPERFAMILY SSF82784 5 139 2.22E-41 T 11-10-2018 IPR036102 OsmC/Ohr superfamily XFC3_05990 a32bcc954c1e8e84cff4e8abc108758d 143 Gene3D G3DSA:3.30.300.20 49 141 3.0E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta XFC3_05990 a32bcc954c1e8e84cff4e8abc108758d 143 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 8 139 5.0E-52 T 11-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 XFC3_12125 08ed5aaa57e171b985aa23469ac08b8e 733 SUPERFAMILY SSF52540 408 613 1.6E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_12125 08ed5aaa57e171b985aa23469ac08b8e 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 2.6E-171 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 XFC3_12125 08ed5aaa57e171b985aa23469ac08b8e 733 SMART SM00487 196 392 1.1E-17 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_12125 08ed5aaa57e171b985aa23469ac08b8e 733 Gene3D G3DSA:1.10.8.630 4 114 2.7E-29 T 11-10-2018 XFC3_12125 08ed5aaa57e171b985aa23469ac08b8e 733 Gene3D G3DSA:3.40.50.300 189 379 1.6E-71 T 11-10-2018 XFC3_12125 08ed5aaa57e171b985aa23469ac08b8e 733 Pfam PF00271 Helicase conserved C-terminal domain 507 593 1.6E-5 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_12125 08ed5aaa57e171b985aa23469ac08b8e 733 Pfam PF00270 DEAD/DEAH box helicase 204 362 1.7E-12 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFC3_12125 08ed5aaa57e171b985aa23469ac08b8e 733 SMART SM00490 497 593 2.4E-9 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_12125 08ed5aaa57e171b985aa23469ac08b8e 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 23.112 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 XFC3_12125 08ed5aaa57e171b985aa23469ac08b8e 733 SUPERFAMILY SSF52540 184 380 3.91E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_10875 1ca3abe0276ef88fd6fcf1faa3ef2b7e 584 Gene3D G3DSA:2.40.40.10 378 484 3.9E-23 T 11-10-2018 IPR036908 RlpA-like domain superfamily XFC3_10875 1ca3abe0276ef88fd6fcf1faa3ef2b7e 584 SUPERFAMILY SSF50685 381 489 1.43E-16 T 11-10-2018 IPR036908 RlpA-like domain superfamily XFC3_10875 1ca3abe0276ef88fd6fcf1faa3ef2b7e 584 Gene3D G3DSA:2.60.40.760 485 578 8.4E-31 T 11-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily XFC3_10875 1ca3abe0276ef88fd6fcf1faa3ef2b7e 584 Gene3D G3DSA:3.20.20.80 25 341 2.2E-45 T 11-10-2018 XFC3_10875 1ca3abe0276ef88fd6fcf1faa3ef2b7e 584 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 42 259 6.4E-15 T 11-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 XFC3_10875 1ca3abe0276ef88fd6fcf1faa3ef2b7e 584 SUPERFAMILY SSF51445 31 344 3.6E-39 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFC3_10875 1ca3abe0276ef88fd6fcf1faa3ef2b7e 584 Pfam PF03330 Lytic transglycolase 428 479 3.0E-7 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain XFC3_10875 1ca3abe0276ef88fd6fcf1faa3ef2b7e 584 SUPERFAMILY SSF49590 488 559 1.01E-11 T 11-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily XFC3_03775 6c77d684bfcf911d611ed9bef2f56442 133 SUPERFAMILY SSF160472 1 121 3.66E-41 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_03775 6c77d684bfcf911d611ed9bef2f56442 133 Pfam PF04591 Protein of unknown function, DUF596 56 132 1.0E-29 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFC3_03775 6c77d684bfcf911d611ed9bef2f56442 133 Gene3D G3DSA:1.10.3510.10 2 123 2.2E-23 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_08380 f4e3062be80cf285de8bc2ef435ee1dc 167 Pfam PF02542 YgbB family 6 159 9.7E-62 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XFC3_08380 f4e3062be80cf285de8bc2ef435ee1dc 167 Gene3D G3DSA:3.30.1330.50 4 166 4.4E-66 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XFC3_08380 f4e3062be80cf285de8bc2ef435ee1dc 167 SUPERFAMILY SSF69765 5 162 1.57E-63 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XFC3_08380 f4e3062be80cf285de8bc2ef435ee1dc 167 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 40 55 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XFC3_08380 f4e3062be80cf285de8bc2ef435ee1dc 167 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 7 160 3.4E-69 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XFC3_08380 f4e3062be80cf285de8bc2ef435ee1dc 167 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 6 161 34.492 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XFC3_07170 69d7a0b83f2319e6bb820cc80b09c12f 385 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 9 355 8.6E-108 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 XFC3_07170 69d7a0b83f2319e6bb820cc80b09c12f 385 Pfam PF04055 Radical SAM superfamily 13 179 9.9E-20 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XFC3_07170 69d7a0b83f2319e6bb820cc80b09c12f 385 Pfam PF06969 HemN C-terminal domain 316 372 1.2E-6 T 11-10-2018 IPR010723 HemN, C-terminal XFC3_07170 69d7a0b83f2319e6bb820cc80b09c12f 385 SMART SM00729 8 225 4.6E-51 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XFC3_07170 69d7a0b83f2319e6bb820cc80b09c12f 385 Gene3D G3DSA:3.80.30.20 4 297 5.7E-99 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe XFC3_07170 69d7a0b83f2319e6bb820cc80b09c12f 385 SUPERFAMILY SSF102114 5 383 1.31E-105 T 11-10-2018 XFC3_07810 6cef4021c0bc0a2ae0178bcb3adb0fde 324 SUPERFAMILY SSF47823 23 119 3.34E-30 T 11-10-2018 XFC3_07810 6cef4021c0bc0a2ae0178bcb3adb0fde 324 SUPERFAMILY SSF56349 125 322 1.03E-54 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFC3_07810 6cef4021c0bc0a2ae0178bcb3adb0fde 324 Pfam PF00589 Phage integrase family 131 306 1.1E-45 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFC3_07810 6cef4021c0bc0a2ae0178bcb3adb0fde 324 Gene3D G3DSA:1.10.443.10 130 318 5.7E-65 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFC3_07810 6cef4021c0bc0a2ae0178bcb3adb0fde 324 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 23 324 55.173 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 XFC3_07810 6cef4021c0bc0a2ae0178bcb3adb0fde 324 Gene3D G3DSA:1.10.150.130 22 117 1.2E-18 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFC3_07810 6cef4021c0bc0a2ae0178bcb3adb0fde 324 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 29 324 2.4E-107 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 XFC3_07810 6cef4021c0bc0a2ae0178bcb3adb0fde 324 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 27 107 3.3E-15 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XFC3_07810 6cef4021c0bc0a2ae0178bcb3adb0fde 324 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 25 324 57.065 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD XFC3_01335 6be721430dce935eddb9ee9e4d555c44 435 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 15 435 48.29 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01335 6be721430dce935eddb9ee9e4d555c44 435 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 138 435 2.3E-118 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01335 6be721430dce935eddb9ee9e4d555c44 435 SUPERFAMILY SSF56762 34 435 1.02E-131 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01335 6be721430dce935eddb9ee9e4d555c44 435 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 61 72 - T 11-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01335 6be721430dce935eddb9ee9e4d555c44 435 Gene3D G3DSA:1.10.645.20 22 435 3.7E-167 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01335 6be721430dce935eddb9ee9e4d555c44 435 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 24 435 1.0E-180 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_09665 690c80adf49c57ef7f417eb9d9c8481e 210 Gene3D G3DSA:3.40.50.12740 5 206 1.1E-48 T 11-10-2018 XFC3_09665 690c80adf49c57ef7f417eb9d9c8481e 210 SMART SM00448 4 118 2.4E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_09665 690c80adf49c57ef7f417eb9d9c8481e 210 SUPERFAMILY SSF52172 1 130 5.41E-26 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_09665 690c80adf49c57ef7f417eb9d9c8481e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFC3_09665 690c80adf49c57ef7f417eb9d9c8481e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFC3_09665 690c80adf49c57ef7f417eb9d9c8481e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFC3_09665 690c80adf49c57ef7f417eb9d9c8481e 210 Pfam PF00072 Response regulator receiver domain 6 118 4.6E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_09665 690c80adf49c57ef7f417eb9d9c8481e 210 SUPERFAMILY SSF46894 129 204 4.76E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XFC3_09665 690c80adf49c57ef7f417eb9d9c8481e 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 2.3E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFC3_09665 690c80adf49c57ef7f417eb9d9c8481e 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFC3_09665 690c80adf49c57ef7f417eb9d9c8481e 210 SMART SM00421 146 203 3.7E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 SUPERFAMILY SSF109736 161 212 2.48E-17 T 11-10-2018 XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 Gene3D G3DSA:3.40.50.880 1013 1322 2.6E-121 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 SUPERFAMILY SSF82697 1 148 8.89E-33 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 Gene3D G3DSA:3.30.1330.10 648 831 2.0E-22 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 Gene3D G3DSA:3.90.650.10 412 592 1.2E-51 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 Gene3D G3DSA:3.90.650.10 832 1012 8.5E-27 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1321 0.0 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 SUPERFAMILY SSF52317 1067 1321 1.04E-89 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1322 19.866 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 SUPERFAMILY SSF55326 213 416 8.37E-48 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 SUPERFAMILY SSF56042 847 1063 1.44E-46 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 SUPERFAMILY SSF56042 421 679 1.24E-48 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 SUPERFAMILY SSF55326 643 840 3.4E-62 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 SMART SM01211 1070 1321 2.7E-138 T 11-10-2018 XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 Gene3D G3DSA:3.30.1330.10 206 411 1.3E-38 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1070 1321 1.8E-96 T 11-10-2018 XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 Gene3D G3DSA:1.10.8.750 151 205 8.2E-20 T 11-10-2018 XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 Pfam PF02769 AIR synthase related protein, C-terminal domain 888 982 5.2E-7 T 11-10-2018 IPR010918 PurM-like, C-terminal domain XFC3_07820 8ac52e2417c2666397bf2ea0f52442b8 1322 Pfam PF02769 AIR synthase related protein, C-terminal domain 421 578 6.1E-32 T 11-10-2018 IPR010918 PurM-like, C-terminal domain XFC3_10650 796a24685e68de9923bf9ef877a97547 551 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XFC3_10650 796a24685e68de9923bf9ef877a97547 551 SUPERFAMILY SSF47005 237 279 2.88E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XFC3_10650 796a24685e68de9923bf9ef877a97547 551 Gene3D G3DSA:3.30.559.10 302 551 7.2E-94 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XFC3_10650 796a24685e68de9923bf9ef877a97547 551 Pfam PF02817 e3 binding domain 241 275 9.2E-15 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 XFC3_10650 796a24685e68de9923bf9ef877a97547 551 Gene3D G3DSA:2.40.50.100 113 189 1.2E-19 T 11-10-2018 XFC3_10650 796a24685e68de9923bf9ef877a97547 551 Gene3D G3DSA:2.40.50.100 4 82 2.2E-20 T 11-10-2018 XFC3_10650 796a24685e68de9923bf9ef877a97547 551 Gene3D G3DSA:4.10.320.10 241 283 1.2E-16 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XFC3_10650 796a24685e68de9923bf9ef877a97547 551 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 317 550 4.1E-80 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 XFC3_10650 796a24685e68de9923bf9ef877a97547 551 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 135 164 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XFC3_10650 796a24685e68de9923bf9ef877a97547 551 SUPERFAMILY SSF51230 111 195 1.44E-20 T 11-10-2018 IPR011053 Single hybrid motif XFC3_10650 796a24685e68de9923bf9ef877a97547 551 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 89 551 1.7E-235 T 11-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 XFC3_10650 796a24685e68de9923bf9ef877a97547 551 Pfam PF00364 Biotin-requiring enzyme 9 77 6.9E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment XFC3_10650 796a24685e68de9923bf9ef877a97547 551 Pfam PF00364 Biotin-requiring enzyme 113 184 4.9E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment XFC3_10650 796a24685e68de9923bf9ef877a97547 551 SUPERFAMILY SSF51230 3 90 3.14E-22 T 11-10-2018 IPR011053 Single hybrid motif XFC3_10650 796a24685e68de9923bf9ef877a97547 551 SUPERFAMILY SSF52777 306 551 1.29E-81 T 11-10-2018 XFC3_11920 bc50c9b59cb82b19d6afda45933b71c9 232 Pfam PF00687 Ribosomal protein L1p/L10e family 29 220 1.3E-42 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein XFC3_11920 bc50c9b59cb82b19d6afda45933b71c9 232 PIRSF PIRSF002155 1 227 3.9E-66 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_11920 bc50c9b59cb82b19d6afda45933b71c9 232 Gene3D G3DSA:3.30.190.20 20 225 2.9E-73 T 11-10-2018 XFC3_11920 bc50c9b59cb82b19d6afda45933b71c9 232 SUPERFAMILY SSF56808 6 226 2.35E-71 T 11-10-2018 IPR023674 Ribosomal protein L1-like XFC3_11920 bc50c9b59cb82b19d6afda45933b71c9 232 Gene3D G3DSA:3.40.50.790 67 159 2.9E-73 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich XFC3_11920 bc50c9b59cb82b19d6afda45933b71c9 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.9E-98 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 XFC3_11920 bc50c9b59cb82b19d6afda45933b71c9 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 229 39.698 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 XFC3_11920 bc50c9b59cb82b19d6afda45933b71c9 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08875 b1d5ebce29ed42983b5bf7f965362aaf 179 Pfam PF00333 Ribosomal protein S5, N-terminal domain 24 85 5.0E-24 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 XFC3_08875 b1d5ebce29ed42983b5bf7f965362aaf 179 Pfam PF03719 Ribosomal protein S5, C-terminal domain 98 168 1.7E-28 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 XFC3_08875 b1d5ebce29ed42983b5bf7f965362aaf 179 Gene3D G3DSA:3.30.230.10 85 176 4.3E-35 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFC3_08875 b1d5ebce29ed42983b5bf7f965362aaf 179 SUPERFAMILY SSF54211 90 170 8.34E-26 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_08875 b1d5ebce29ed42983b5bf7f965362aaf 179 Gene3D G3DSA:3.30.160.20 13 84 1.2E-26 T 11-10-2018 XFC3_08875 b1d5ebce29ed42983b5bf7f965362aaf 179 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 22 172 4.4E-64 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 XFC3_08875 b1d5ebce29ed42983b5bf7f965362aaf 179 ProSitePatterns PS00585 Ribosomal protein S5 signature. 39 71 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site XFC3_08875 b1d5ebce29ed42983b5bf7f965362aaf 179 SUPERFAMILY SSF54768 20 87 1.46E-20 T 11-10-2018 XFC3_08875 b1d5ebce29ed42983b5bf7f965362aaf 179 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 174 33.347 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 XFC3_00205 e784dacea2191cfb6acd3ecea5d21d15 455 SMART SM00878 336 441 2.5E-62 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XFC3_00205 e784dacea2191cfb6acd3ecea5d21d15 455 SUPERFAMILY SSF52440 1 113 1.01E-46 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XFC3_00205 e784dacea2191cfb6acd3ecea5d21d15 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.5E-44 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XFC3_00205 e784dacea2191cfb6acd3ecea5d21d15 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.6E-37 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XFC3_00205 e784dacea2191cfb6acd3ecea5d21d15 455 Gene3D G3DSA:3.30.1490.20 131 203 4.4E-153 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XFC3_00205 e784dacea2191cfb6acd3ecea5d21d15 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 2.3E-83 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFC3_00205 e784dacea2191cfb6acd3ecea5d21d15 455 Gene3D G3DSA:3.40.50.20 1 85 1.5E-34 T 11-10-2018 XFC3_00205 e784dacea2191cfb6acd3ecea5d21d15 455 SUPERFAMILY SSF56059 83 343 8.13E-67 T 11-10-2018 XFC3_00205 e784dacea2191cfb6acd3ecea5d21d15 455 SUPERFAMILY SSF51246 331 444 3.56E-42 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 XFC3_00205 e784dacea2191cfb6acd3ecea5d21d15 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFC3_00205 e784dacea2191cfb6acd3ecea5d21d15 455 Gene3D G3DSA:3.30.470.20 86 431 4.4E-153 T 11-10-2018 XFC3_00205 e784dacea2191cfb6acd3ecea5d21d15 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFC3_00205 e784dacea2191cfb6acd3ecea5d21d15 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 7.1E-229 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 XFC3_09265 5549c01716cd5c47242ab8d57970371e 261 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 XFC3_09265 5549c01716cd5c47242ab8d57970371e 261 Pfam PF13534 4Fe-4S dicluster domain 171 244 6.7E-10 T 11-10-2018 XFC3_09265 5549c01716cd5c47242ab8d57970371e 261 SUPERFAMILY SSF46548 131 258 5.06E-40 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XFC3_09265 5549c01716cd5c47242ab8d57970371e 261 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 253 5.5E-84 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09265 5549c01716cd5c47242ab8d57970371e 261 SUPERFAMILY SSF54292 28 129 3.19E-30 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 XFC3_09265 5549c01716cd5c47242ab8d57970371e 261 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 134 6.7E-34 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09265 5549c01716cd5c47242ab8d57970371e 261 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XFC3_09265 5549c01716cd5c47242ab8d57970371e 261 Gene3D G3DSA:1.10.1060.10 130 261 5.9E-59 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XFC3_09265 5549c01716cd5c47242ab8d57970371e 261 Gene3D G3DSA:3.10.20.30 19 129 1.0E-44 T 11-10-2018 IPR012675 Beta-grasp domain superfamily XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 2.4E-63 T 11-10-2018 XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 245 1.5E-97 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.6E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.6E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.6E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 Gene3D G3DSA:3.40.50.720 1 247 2.1E-80 T 11-10-2018 XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 185 9.3E-4 T 11-10-2018 XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 9.4E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 9.4E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.4E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 9.4E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 9.4E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 9.4E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 SUPERFAMILY SSF51735 6 246 3.16E-81 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_02530 87fe5263807662f52cbd11cd53e12d20 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XFC3_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 23.098 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.0E-24 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 Pfam PF01165 Ribosomal protein S21 3 56 1.8E-22 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 Gene3D G3DSA:1.20.5.1150 16 54 2.7E-20 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 1.0E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 8.3E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 8.3E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 8.3E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 8.3E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_00110 439f372c5a44aaf76f525f2d53083928 187 SUPERFAMILY SSF54523 15 140 8.63E-22 T 11-10-2018 XFC3_00110 439f372c5a44aaf76f525f2d53083928 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 35 8.1E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_00110 439f372c5a44aaf76f525f2d53083928 187 Pfam PF12019 Type II transport protein GspH 51 167 9.8E-19 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 XFC3_00110 439f372c5a44aaf76f525f2d53083928 187 Gene3D G3DSA:3.30.700.10 15 159 3.4E-13 T 11-10-2018 XFC3_01795 7b2fa4f3ad908912771f2c9391b02a1c 292 Pfam PF03631 Virulence factor BrkB 34 281 2.3E-51 T 11-10-2018 IPR017039 Virulence factor BrkB XFC3_01795 7b2fa4f3ad908912771f2c9391b02a1c 292 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 24 280 3.9E-30 T 11-10-2018 IPR017039 Virulence factor BrkB XFC3_01795 7b2fa4f3ad908912771f2c9391b02a1c 292 PIRSF PIRSF035875 5 292 2.9E-67 T 11-10-2018 IPR017039 Virulence factor BrkB XFC3_02435 6e536db9fed16b4f901752b04b180c53 228 PIRSF PIRSF001435 15 227 2.1E-50 T 11-10-2018 XFC3_02435 6e536db9fed16b4f901752b04b180c53 228 Gene3D G3DSA:1.10.340.30 37 148 9.1E-75 T 11-10-2018 XFC3_02435 6e536db9fed16b4f901752b04b180c53 228 SUPERFAMILY SSF48150 21 224 1.73E-71 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 XFC3_02435 6e536db9fed16b4f901752b04b180c53 228 Gene3D G3DSA:1.10.1670.10 28 219 9.1E-75 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 XFC3_02435 6e536db9fed16b4f901752b04b180c53 228 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 203 219 4.2E-6 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 XFC3_02435 6e536db9fed16b4f901752b04b180c53 228 Pfam PF00633 Helix-hairpin-helix motif 116 143 6.1E-8 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 XFC3_02435 6e536db9fed16b4f901752b04b180c53 228 ProSitePatterns PS01155 Endonuclease III family signature. 118 147 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 XFC3_02435 6e536db9fed16b4f901752b04b180c53 228 SMART SM00525 202 222 1.8E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 XFC3_02435 6e536db9fed16b4f901752b04b180c53 228 SMART SM00478 54 201 3.6E-51 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XFC3_02435 6e536db9fed16b4f901752b04b180c53 228 TIGRFAM TIGR01083 nth: endonuclease III 21 210 1.8E-82 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 XFC3_02435 6e536db9fed16b4f901752b04b180c53 228 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 50 182 3.9E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XFC3_02435 6e536db9fed16b4f901752b04b180c53 228 Hamap MF_00942 Endonuclease III [nth]. 10 225 36.234 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 XFC3_11635 84624f712282791db2e79ce1c5a5937f 143 Gene3D G3DSA:3.30.70.60 2 93 8.5E-29 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 XFC3_11635 84624f712282791db2e79ce1c5a5937f 143 TIGRFAM TIGR00166 S6: ribosomal protein bS6 3 93 6.6E-31 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11635 84624f712282791db2e79ce1c5a5937f 143 SUPERFAMILY SSF54995 2 104 4.97E-34 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11635 84624f712282791db2e79ce1c5a5937f 143 Pfam PF01250 Ribosomal protein S6 4 92 2.2E-26 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11635 84624f712282791db2e79ce1c5a5937f 143 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 2 95 20.824 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 XFC3_10355 c8cf8dff69cf4ff50ad579ef1004b699 307 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFC3_10355 c8cf8dff69cf4ff50ad579ef1004b699 307 Gene3D G3DSA:3.10.25.10 206 307 1.7E-29 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFC3_10355 c8cf8dff69cf4ff50ad579ef1004b699 307 Gene3D G3DSA:3.40.50.170 1 205 2.4E-73 T 11-10-2018 XFC3_10355 c8cf8dff69cf4ff50ad579ef1004b699 307 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 302 9.1E-90 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 XFC3_10355 c8cf8dff69cf4ff50ad579ef1004b699 307 Pfam PF02911 Formyl transferase, C-terminal domain 203 299 4.2E-25 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFC3_10355 c8cf8dff69cf4ff50ad579ef1004b699 307 Pfam PF00551 Formyl transferase 10 176 7.2E-44 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFC3_10355 c8cf8dff69cf4ff50ad579ef1004b699 307 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 303 35.934 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 XFC3_10355 c8cf8dff69cf4ff50ad579ef1004b699 307 SUPERFAMILY SSF50486 205 302 8.44E-29 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 XFC3_10355 c8cf8dff69cf4ff50ad579ef1004b699 307 SUPERFAMILY SSF53328 1 205 2.62E-62 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFC3_03045 5e4bec1139ec48725fbd9b05d727cf40 484 Pfam PF13727 CoA-binding domain 77 255 3.7E-29 T 11-10-2018 XFC3_03045 5e4bec1139ec48725fbd9b05d727cf40 484 Pfam PF02397 Bacterial sugar transferase 293 478 2.1E-64 T 11-10-2018 IPR003362 Bacterial sugar transferase XFC3_03045 5e4bec1139ec48725fbd9b05d727cf40 484 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 33 484 3.9E-157 T 11-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 XFC3_03045 5e4bec1139ec48725fbd9b05d727cf40 484 Gene3D G3DSA:3.40.50.720 155 278 1.9E-12 T 11-10-2018 XFC3_03045 5e4bec1139ec48725fbd9b05d727cf40 484 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 33 484 7.4E-139 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase XFC3_01245 70bf52617019b653c7f9faa4736c394f 867 PIRSF PIRSF036687 1 865 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XFC3_01245 70bf52617019b653c7f9faa4736c394f 867 Gene3D G3DSA:3.30.499.10 690 866 6.1E-64 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XFC3_01245 70bf52617019b653c7f9faa4736c394f 867 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.5E-93 T 11-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XFC3_01245 70bf52617019b653c7f9faa4736c394f 867 Gene3D G3DSA:3.40.1060.10 385 688 6.5E-148 T 11-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 XFC3_01245 70bf52617019b653c7f9faa4736c394f 867 SUPERFAMILY SSF52016 162 372 9.42E-65 T 11-10-2018 XFC3_01245 70bf52617019b653c7f9faa4736c394f 867 SUPERFAMILY SSF53732 379 860 4.19E-145 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 XFC3_01245 70bf52617019b653c7f9faa4736c394f 867 SUPERFAMILY SSF74778 1 160 2.22E-63 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XFC3_01245 70bf52617019b653c7f9faa4736c394f 867 Gene3D G3DSA:3.20.19.10 162 361 2.6E-68 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 XFC3_01245 70bf52617019b653c7f9faa4736c394f 867 Gene3D G3DSA:1.25.40.310 1 161 5.2E-64 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XFC3_01245 70bf52617019b653c7f9faa4736c394f 867 Pfam PF00330 Aconitase family (aconitate hydratase) 478 821 6.1E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_01245 70bf52617019b653c7f9faa4736c394f 867 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.6E-60 T 11-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XFC3_01245 70bf52617019b653c7f9faa4736c394f 867 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 858 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XFC3_01245 70bf52617019b653c7f9faa4736c394f 867 ProSitePatterns PS00450 Aconitase family signature 1. 709 726 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XFC3_01245 70bf52617019b653c7f9faa4736c394f 867 Gene3D G3DSA:3.30.499.10 409 536 6.5E-148 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XFC3_10605 c658d090c59c93334628347cbebf5096 674 SMART SM00491 491 619 1.3E-33 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 XFC3_10605 c658d090c59c93334628347cbebf5096 674 Pfam PF13307 Helicase C-terminal domain 476 631 1.4E-30 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 XFC3_10605 c658d090c59c93334628347cbebf5096 674 Gene3D G3DSA:3.40.50.300 467 651 1.5E-31 T 11-10-2018 XFC3_10605 c658d090c59c93334628347cbebf5096 674 Gene3D G3DSA:3.40.50.300 26 290 9.4E-40 T 11-10-2018 XFC3_10605 c658d090c59c93334628347cbebf5096 674 SUPERFAMILY SSF52540 20 615 1.12E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_03155 dc5102e08f9bf4049ceed0bddeb41920 349 Gene3D G3DSA:3.30.390.60 133 234 6.2E-41 T 11-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily XFC3_03155 dc5102e08f9bf4049ceed0bddeb41920 349 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 10 80 2.1E-7 T 11-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 XFC3_03155 dc5102e08f9bf4049ceed0bddeb41920 349 SUPERFAMILY SSF55781 78 344 4.12E-63 T 11-10-2018 XFC3_03155 dc5102e08f9bf4049ceed0bddeb41920 349 Pfam PF01628 HrcA protein C terminal domain 110 329 4.1E-57 T 11-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 XFC3_03155 dc5102e08f9bf4049ceed0bddeb41920 349 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 8 336 29.087 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 XFC3_03155 dc5102e08f9bf4049ceed0bddeb41920 349 PIRSF PIRSF005485 6 346 1.1E-110 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 XFC3_03155 dc5102e08f9bf4049ceed0bddeb41920 349 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 10 342 2.0E-103 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 XFC3_03155 dc5102e08f9bf4049ceed0bddeb41920 349 SUPERFAMILY SSF46785 9 90 2.94E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_03155 dc5102e08f9bf4049ceed0bddeb41920 349 Gene3D G3DSA:1.10.10.10 3 90 1.3E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_03155 dc5102e08f9bf4049ceed0bddeb41920 349 Gene3D G3DSA:3.30.450.40 111 339 6.2E-41 T 11-10-2018 IPR029016 GAF-like domain superfamily XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 SMART SM00388 214 278 5.8E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 SUPERFAMILY SSF47384 201 278 9.81E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 429 5.5E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 430 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 Gene3D G3DSA:1.10.287.130 209 279 8.4E-24 T 11-10-2018 XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 SUPERFAMILY SSF55785 91 166 2.38E-6 T 11-10-2018 IPR035965 PAS domain superfamily XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 SMART SM00387 321 433 1.8E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 Pfam PF13188 PAS domain 107 157 2.1E-4 T 11-10-2018 IPR000014 PAS domain XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 SUPERFAMILY SSF55874 267 429 1.96E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 Gene3D G3DSA:3.30.565.10 280 439 4.2E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 Pfam PF11808 Domain of unknown function (DUF3329) 14 97 2.2E-17 T 11-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 277 8.1E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFC3_11750 ab50c7c6a346de90f9281bc7df71fd22 446 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 102 429 1.7E-121 T 11-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 XFC3_00875 b7bfce6b3eed4b6b2ba41aa093532f4c 109 SUPERFAMILY SSF46565 43 105 9.68E-20 T 11-10-2018 IPR036869 Chaperone J-domain superfamily XFC3_00875 b7bfce6b3eed4b6b2ba41aa093532f4c 109 Gene3D G3DSA:1.10.287.110 34 109 8.1E-15 T 11-10-2018 IPR036869 Chaperone J-domain superfamily XFC3_00875 b7bfce6b3eed4b6b2ba41aa093532f4c 109 SMART SM00271 45 108 5.1E-13 T 11-10-2018 IPR001623 DnaJ domain XFC3_00875 b7bfce6b3eed4b6b2ba41aa093532f4c 109 Pfam PF00226 DnaJ domain 46 103 7.6E-12 T 11-10-2018 IPR001623 DnaJ domain XFC3_00875 b7bfce6b3eed4b6b2ba41aa093532f4c 109 PRINTS PR00625 DnaJ domain signature 66 81 2.2E-9 T 11-10-2018 IPR001623 DnaJ domain XFC3_00875 b7bfce6b3eed4b6b2ba41aa093532f4c 109 PRINTS PR00625 DnaJ domain signature 48 66 2.2E-9 T 11-10-2018 IPR001623 DnaJ domain XFC3_00875 b7bfce6b3eed4b6b2ba41aa093532f4c 109 PRINTS PR00625 DnaJ domain signature 88 108 2.2E-9 T 11-10-2018 IPR001623 DnaJ domain XFC3_12200 7fbf44a272d810b10ffa6f809686b062 494 SUPERFAMILY SSF46548 6 158 3.03E-37 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XFC3_12200 7fbf44a272d810b10ffa6f809686b062 494 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 7 483 1.0E-253 T 11-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 XFC3_12200 7fbf44a272d810b10ffa6f809686b062 494 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 471 6.2E-26 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XFC3_12200 7fbf44a272d810b10ffa6f809686b062 494 Gene3D G3DSA:1.10.1060.10 20 145 5.3E-33 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XFC3_12200 7fbf44a272d810b10ffa6f809686b062 494 Gene3D G3DSA:3.50.50.60 257 409 1.4E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_12200 7fbf44a272d810b10ffa6f809686b062 494 SUPERFAMILY SSF51971 146 410 9.42E-65 T 11-10-2018 XFC3_12200 7fbf44a272d810b10ffa6f809686b062 494 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 29 135 8.8E-37 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 XFC3_12200 7fbf44a272d810b10ffa6f809686b062 494 PRINTS PR00419 Adrenodoxin reductase family signature 172 185 1.6E-29 T 11-10-2018 XFC3_12200 7fbf44a272d810b10ffa6f809686b062 494 PRINTS PR00419 Adrenodoxin reductase family signature 299 313 1.6E-29 T 11-10-2018 XFC3_12200 7fbf44a272d810b10ffa6f809686b062 494 PRINTS PR00419 Adrenodoxin reductase family signature 149 171 1.6E-29 T 11-10-2018 XFC3_12200 7fbf44a272d810b10ffa6f809686b062 494 PRINTS PR00419 Adrenodoxin reductase family signature 333 346 1.6E-29 T 11-10-2018 XFC3_12200 7fbf44a272d810b10ffa6f809686b062 494 Gene3D G3DSA:3.40.50.720 146 256 4.9E-19 T 11-10-2018 XFC3_02545 eff2988a8d68da99efd9106f195987d9 452 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 97 443 1.3E-126 T 11-10-2018 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I XFC3_02545 eff2988a8d68da99efd9106f195987d9 452 PRINTS PR00095 Anthranilate synthase component I signature 289 302 2.8E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_02545 eff2988a8d68da99efd9106f195987d9 452 PRINTS PR00095 Anthranilate synthase component I signature 383 397 2.8E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_02545 eff2988a8d68da99efd9106f195987d9 452 PRINTS PR00095 Anthranilate synthase component I signature 303 316 2.8E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_02545 eff2988a8d68da99efd9106f195987d9 452 PRINTS PR00095 Anthranilate synthase component I signature 398 412 2.8E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_02545 eff2988a8d68da99efd9106f195987d9 452 Gene3D G3DSA:3.60.120.10 1 451 3.9E-153 T 11-10-2018 IPR005801 ADC synthase GO:0009058 XFC3_02545 eff2988a8d68da99efd9106f195987d9 452 Pfam PF00425 chorismate binding enzyme 189 441 1.1E-87 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal XFC3_02545 eff2988a8d68da99efd9106f195987d9 452 Pfam PF04715 Anthranilate synthase component I, N terminal region 16 141 2.1E-4 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_02545 eff2988a8d68da99efd9106f195987d9 452 SUPERFAMILY SSF56322 5 449 3.27E-120 T 11-10-2018 IPR005801 ADC synthase GO:0009058 XFC3_06150 f5d6d3151f09f7906a41c70570ceb23e 242 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 7 234 9.5E-20 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 XFC3_06150 f5d6d3151f09f7906a41c70570ceb23e 242 SUPERFAMILY SSF53067 5 109 7.77E-16 T 11-10-2018 XFC3_06150 f5d6d3151f09f7906a41c70570ceb23e 242 Gene3D G3DSA:3.30.420.490 114 228 6.3E-53 T 11-10-2018 XFC3_06150 f5d6d3151f09f7906a41c70570ceb23e 242 Pfam PF03309 Type III pantothenate kinase 5 190 2.0E-32 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 XFC3_06150 f5d6d3151f09f7906a41c70570ceb23e 242 Gene3D G3DSA:3.30.420.40 5 233 6.3E-53 T 11-10-2018 XFC3_06150 f5d6d3151f09f7906a41c70570ceb23e 242 SUPERFAMILY SSF53067 112 236 5.61E-25 T 11-10-2018 XFC3_06150 f5d6d3151f09f7906a41c70570ceb23e 242 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 240 14.342 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 XFC3_11670 6a540637f91976a016300b6d03cf95f2 351 SUPERFAMILY SSF56194 219 349 5.62E-44 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_11670 6a540637f91976a016300b6d03cf95f2 351 SUPERFAMILY SSF56176 18 203 5.12E-35 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XFC3_11670 6a540637f91976a016300b6d03cf95f2 351 Pfam PF01565 FAD binding domain 52 163 2.8E-15 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 XFC3_11670 6a540637f91976a016300b6d03cf95f2 351 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 351 77.814 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_11670 6a540637f91976a016300b6d03cf95f2 351 Gene3D G3DSA:3.90.78.10 236 351 7.0E-42 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_11670 6a540637f91976a016300b6d03cf95f2 351 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 18 348 3.3E-64 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_11670 6a540637f91976a016300b6d03cf95f2 351 Gene3D G3DSA:3.30.43.10 11 80 6.4E-15 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 XFC3_11670 6a540637f91976a016300b6d03cf95f2 351 Gene3D G3DSA:3.30.465.10 83 235 4.7E-51 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XFC3_11670 6a540637f91976a016300b6d03cf95f2 351 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 223 347 6.7E-33 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_09565 34d1043b9816fafbddeeaed9380a7391 467 SMART SM00840 339 408 2.8E-13 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 XFC3_09565 34d1043b9816fafbddeeaed9380a7391 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.5E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XFC3_09565 34d1043b9816fafbddeeaed9380a7391 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 1.5E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XFC3_09565 34d1043b9816fafbddeeaed9380a7391 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.5E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XFC3_09565 34d1043b9816fafbddeeaed9380a7391 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 1.5E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XFC3_09565 34d1043b9816fafbddeeaed9380a7391 467 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 313 2.7E-111 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 XFC3_09565 34d1043b9816fafbddeeaed9380a7391 467 Gene3D G3DSA:1.20.120.640 307 465 1.9E-34 T 11-10-2018 XFC3_09565 34d1043b9816fafbddeeaed9380a7391 467 Pfam PF09190 DALR domain 340 408 5.8E-14 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 XFC3_09565 34d1043b9816fafbddeeaed9380a7391 467 SUPERFAMILY SSF47323 317 464 1.19E-29 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_09565 34d1043b9816fafbddeeaed9380a7391 467 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 465 36.492 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 XFC3_09565 34d1043b9816fafbddeeaed9380a7391 467 Gene3D G3DSA:3.40.50.620 1 306 1.7E-120 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_09565 34d1043b9816fafbddeeaed9380a7391 467 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 464 3.7E-146 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 XFC3_09565 34d1043b9816fafbddeeaed9380a7391 467 SUPERFAMILY SSF52374 4 314 1.96E-87 T 11-10-2018 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1104 1116 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Pfam PF04560 RNA polymerase Rpb2, domain 7 1308 1382 6.9E-27 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Pfam PF04565 RNA polymerase Rpb2, domain 3 541 608 5.1E-27 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:3.90.1110.10 327 468 4.2E-28 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:2.40.50.100 742 817 3.4E-29 T 11-10-2018 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Pfam PF04563 RNA polymerase beta subunit 28 527 7.7E-42 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:2.40.270.10 819 861 1.5E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Pfam PF04561 RNA polymerase Rpb2, domain 2 450 482 3.7E-5 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Pfam PF04561 RNA polymerase Rpb2, domain 2 157 227 4.2E-8 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1381 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Pfam PF10385 RNA polymerase beta subunit external 1 domain 619 684 2.9E-23 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:2.40.50.150 862 985 8.1E-44 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Pfam PF00562 RNA polymerase Rpb2, domain 6 746 1306 1.0E-158 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:3.90.1800.10 1294 1345 7.2E-11 T 11-10-2018 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:2.40.270.10 1076 1284 2.4E-85 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 14 1384 12.279 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:3.90.1100.10 19 177 2.5E-55 T 11-10-2018 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:3.90.1100.10 674 741 9.1E-21 T 11-10-2018 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 SUPERFAMILY SSF64484 13 1382 0.0 T 11-10-2018 XFC3_11905 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:3.90.1100.10 469 658 9.4E-67 T 11-10-2018 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 Gene3D G3DSA:3.30.420.110 140 272 1.2E-37 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 Gene3D G3DSA:1.10.1420.10 398 514 1.2E-94 T 11-10-2018 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 SMART SM00534 618 810 9.1E-107 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 SMART SM00533 295 602 1.2E-94 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 Pfam PF00488 MutS domain V 621 813 1.0E-81 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 Gene3D G3DSA:3.40.50.300 579 864 4.6E-95 T 11-10-2018 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 Pfam PF05190 MutS family domain IV 439 529 4.0E-29 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 699 715 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 SUPERFAMILY SSF53150 126 278 1.7E-40 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 Gene3D G3DSA:3.40.1170.10 13 133 2.7E-48 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 PIRSF PIRSF037677 228 856 5.1E-116 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 PIRSF PIRSF037677 13 201 3.2E-25 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 Pfam PF05192 MutS domain III 281 570 2.9E-39 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 Pfam PF01624 MutS domain I 20 131 1.4E-40 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 19 870 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 Gene3D G3DSA:1.10.1420.10 278 570 1.2E-94 T 11-10-2018 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 19 865 24.613 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 SUPERFAMILY SSF52540 578 814 1.26E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 SUPERFAMILY SSF48334 279 576 3.53E-83 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 SUPERFAMILY SSF55271 14 127 4.71E-42 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 XFC3_06550 cc4fd3580e7a97fe0dad387734be081c 873 Pfam PF05188 MutS domain II 141 264 8.8E-30 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 XFC3_03220 786b1cb6b300e9ed6a0a4b59e83c932d 371 Gene3D G3DSA:3.30.2420.10 291 365 1.0E-21 T 11-10-2018 XFC3_03220 786b1cb6b300e9ed6a0a4b59e83c932d 371 PRINTS PR01374 Gram-negative bacterial tonB protein signature 313 331 3.8E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XFC3_03220 786b1cb6b300e9ed6a0a4b59e83c932d 371 PRINTS PR01374 Gram-negative bacterial tonB protein signature 332 349 3.8E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XFC3_03220 786b1cb6b300e9ed6a0a4b59e83c932d 371 PRINTS PR01374 Gram-negative bacterial tonB protein signature 292 313 3.8E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XFC3_03220 786b1cb6b300e9ed6a0a4b59e83c932d 371 SUPERFAMILY SSF74653 290 356 1.96E-20 T 11-10-2018 XFC3_03220 786b1cb6b300e9ed6a0a4b59e83c932d 371 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 298 368 2.2E-20 T 11-10-2018 IPR006260 TonB/TolA, C-terminal XFC3_03220 786b1cb6b300e9ed6a0a4b59e83c932d 371 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 296 356 1.2E-18 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 XFC3_08735 18b07be6c1ca3170d98770e84a99385f 160 SUPERFAMILY SSF52218 1 151 1.8E-25 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFC3_08735 18b07be6c1ca3170d98770e84a99385f 160 TIGRFAM TIGR01754 flav_RNR: putative ribonucleotide reductase-associated flavodoxin 1 144 5.9E-74 T 11-10-2018 IPR010088 Ribonucleotide reductase-associated flavodoxin, putative XFC3_08735 18b07be6c1ca3170d98770e84a99385f 160 Gene3D G3DSA:3.40.50.360 2 147 1.8E-16 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFC3_08735 18b07be6c1ca3170d98770e84a99385f 160 Pfam PF00258 Flavodoxin 8 122 1.2E-7 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 Gene3D G3DSA:3.30.470.90 73 318 5.4E-93 T 11-10-2018 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 Pfam PF12826 Helix-hairpin-helix motif 576 639 1.7E-13 T 11-10-2018 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 753 823 2.6E-10 T 11-10-2018 IPR001357 BRCT domain XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 8 319 2.6E-120 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 PIRSF PIRSF001604 2 664 6.1E-198 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 PIRSF PIRSF001604 659 829 1.5E-25 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 397 3.8E-33 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 SMART SM00532 5 449 5.6E-249 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 498 3.6E-188 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 SUPERFAMILY SSF47781 662 734 4.77E-8 T 11-10-2018 IPR010994 RuvA domain 2-like XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 Gene3D G3DSA:2.20.70.80 392 432 3.4E-14 T 11-10-2018 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 SMART SM00292 751 828 2.4E-10 T 11-10-2018 IPR001357 BRCT domain XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 Gene3D G3DSA:1.10.150.20 433 500 5.1E-19 T 11-10-2018 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 Gene3D G3DSA:1.10.287.610 4 72 1.1E-25 T 11-10-2018 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 Hamap MF_01588 DNA ligase [ligA]. 4 825 49.766 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 SUPERFAMILY SSF50249 319 398 3.08E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 Gene3D G3DSA:1.10.150.20 572 652 5.4E-20 T 11-10-2018 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 Gene3D G3DSA:3.40.50.10190 741 827 1.2E-22 T 11-10-2018 IPR036420 BRCT domain superfamily XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 Gene3D G3DSA:2.40.50.140 319 391 4.3E-32 T 11-10-2018 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 435 1.3E-9 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 SUPERFAMILY SSF56091 5 317 5.22E-114 T 11-10-2018 XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 SUPERFAMILY SSF52113 752 826 1.38E-14 T 11-10-2018 IPR036420 BRCT domain superfamily XFC3_11610 1a844719cc3b6179ceb282d80ee38a80 831 SUPERFAMILY SSF47781 405 650 2.45E-48 T 11-10-2018 IPR010994 RuvA domain 2-like XFC3_11495 5c5dd3986a5e409ab43ae121394a7316 225 Gene3D G3DSA:1.10.10.10 120 223 6.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_11495 5c5dd3986a5e409ab43ae121394a7316 225 SMART SM00862 146 220 1.4E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFC3_11495 5c5dd3986a5e409ab43ae121394a7316 225 SMART SM00448 1 113 1.3E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_11495 5c5dd3986a5e409ab43ae121394a7316 225 SUPERFAMILY SSF52172 2 171 1.71E-38 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_11495 5c5dd3986a5e409ab43ae121394a7316 225 Pfam PF00072 Response regulator receiver domain 3 112 2.7E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_11495 5c5dd3986a5e409ab43ae121394a7316 225 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-36 T 11-10-2018 XFC3_11495 5c5dd3986a5e409ab43ae121394a7316 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 1.2E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 1.6E-35 T 11-10-2018 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 290 1.6E-35 T 11-10-2018 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 325 1.6E-35 T 11-10-2018 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.6E-35 T 11-10-2018 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 1.6E-35 T 11-10-2018 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 Gene3D G3DSA:3.50.50.60 5 343 1.4E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 Gene3D G3DSA:3.30.390.30 356 478 3.8E-44 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.1E-72 T 11-10-2018 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 2.1E-72 T 11-10-2018 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 2.1E-72 T 11-10-2018 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 2.1E-72 T 11-10-2018 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 2.1E-72 T 11-10-2018 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 318 325 2.1E-72 T 11-10-2018 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 289 2.1E-72 T 11-10-2018 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 2.1E-72 T 11-10-2018 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 353 374 2.1E-72 T 11-10-2018 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PIRSF PIRSF000350 1 476 1.1E-79 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 Gene3D G3DSA:3.50.50.60 163 288 1.4E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 475 7.9E-154 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 338 2.3E-65 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 SUPERFAMILY SSF55424 355 475 3.26E-41 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 465 3.2E-36 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 XFC3_06995 e1ef52ba34f8cb8c74ac96640cce9c1f 478 SUPERFAMILY SSF51905 1 347 5.75E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_04390 22263cdcf18654b30d3f12e016987ad1 110 SMART SM00530 56 109 0.0018 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_04390 22263cdcf18654b30d3f12e016987ad1 110 Pfam PF01381 Helix-turn-helix 57 100 3.9E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_04390 22263cdcf18654b30d3f12e016987ad1 110 Gene3D G3DSA:1.10.260.40 30 108 4.8E-14 T 11-10-2018 XFC3_04390 22263cdcf18654b30d3f12e016987ad1 110 SUPERFAMILY SSF47413 53 95 2.28E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_02260 1e973d64e933129c84ce6203833fcb6f 456 Pfam PF05050 Methyltransferase FkbM domain 30 190 8.3E-18 T 11-10-2018 IPR006342 Methyltransferase FkbM XFC3_02260 1e973d64e933129c84ce6203833fcb6f 456 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 28 154 7.1E-17 T 11-10-2018 IPR006342 Methyltransferase FkbM XFC3_02260 1e973d64e933129c84ce6203833fcb6f 456 SUPERFAMILY SSF53335 22 168 4.82E-16 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_02260 1e973d64e933129c84ce6203833fcb6f 456 Gene3D G3DSA:3.40.50.150 16 179 2.5E-14 T 11-10-2018 XFC3_10475 d5e71d555e62a51b18cf84130b744d50 366 Pfam PF13387 Domain of unknown function (DUF4105) 10 130 4.4E-11 T 11-10-2018 IPR025178 Domain of unknown function DUF4105 XFC3_04875 056ac7e611b0f2126595ad30d461efde 398 PIRSF PIRSF001259 1 375 7.5E-106 T 11-10-2018 XFC3_04875 056ac7e611b0f2126595ad30d461efde 398 SUPERFAMILY SSF142695 186 342 3.27E-46 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XFC3_04875 056ac7e611b0f2126595ad30d461efde 398 Pfam PF00925 GTP cyclohydrolase II 178 341 3.6E-49 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XFC3_04875 056ac7e611b0f2126595ad30d461efde 398 Gene3D G3DSA:3.40.50.10990 173 344 4.5E-55 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XFC3_04875 056ac7e611b0f2126595ad30d461efde 398 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 171 367 39.31 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XFC3_02345 873d6276d04211ab2983edcd2c47a4fc 131 Pfam PF10137 Predicted nucleotide-binding protein containing TIR-like domain 1 104 7.3E-29 T 11-10-2018 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain XFC3_05905 886d11ad1448580711283ed37117a3e2 108 SUPERFAMILY SSF56712 2 108 2.22E-19 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XFC3_05905 886d11ad1448580711283ed37117a3e2 108 Pfam PF01131 DNA topoisomerase 2 108 1.0E-12 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFC3_05905 886d11ad1448580711283ed37117a3e2 108 Gene3D G3DSA:1.10.290.10 80 108 4.8E-21 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XFC3_05905 886d11ad1448580711283ed37117a3e2 108 Gene3D G3DSA:2.70.20.10 10 79 4.8E-21 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XFC3_11855 bae9975df892c6e6769247d5fd1ab0e2 623 Pfam PF00005 ABC transporter 20 180 3.0E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_11855 bae9975df892c6e6769247d5fd1ab0e2 623 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_11855 bae9975df892c6e6769247d5fd1ab0e2 623 SUPERFAMILY SSF52540 2 240 1.36E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11855 bae9975df892c6e6769247d5fd1ab0e2 623 Pfam PF00005 ABC transporter 331 464 5.3E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_11855 bae9975df892c6e6769247d5fd1ab0e2 623 Gene3D G3DSA:1.10.287.380 547 623 2.9E-22 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 XFC3_11855 bae9975df892c6e6769247d5fd1ab0e2 623 Gene3D G3DSA:3.40.50.300 3 274 2.3E-64 T 11-10-2018 XFC3_11855 bae9975df892c6e6769247d5fd1ab0e2 623 Pfam PF16326 ABC transporter C-terminal domain 554 621 5.8E-20 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 XFC3_11855 bae9975df892c6e6769247d5fd1ab0e2 623 SUPERFAMILY SSF52540 308 508 2.63E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11855 bae9975df892c6e6769247d5fd1ab0e2 623 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_11855 bae9975df892c6e6769247d5fd1ab0e2 623 SMART SM00382 28 225 4.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_11855 bae9975df892c6e6769247d5fd1ab0e2 623 SMART SM00382 339 509 9.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_11855 bae9975df892c6e6769247d5fd1ab0e2 623 Pfam PF12848 ABC transporter 219 293 2.1E-10 T 11-10-2018 IPR032781 ABC-transporter extension domain XFC3_11855 bae9975df892c6e6769247d5fd1ab0e2 623 Gene3D G3DSA:3.40.50.300 277 541 4.8E-66 T 11-10-2018 XFC3_01520 3d9c54fe2033839e8a32720e3a273323 420 PIRSF PIRSF029171 5 420 8.9E-76 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XFC3_01520 3d9c54fe2033839e8a32720e3a273323 420 SUPERFAMILY SSF53474 85 387 9.54E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_01520 3d9c54fe2033839e8a32720e3a273323 420 Pfam PF03583 Secretory lipase 128 210 5.6E-8 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XFC3_01520 3d9c54fe2033839e8a32720e3a273323 420 Gene3D G3DSA:1.10.260.160 253 336 4.7E-5 T 11-10-2018 XFC3_01520 3d9c54fe2033839e8a32720e3a273323 420 Gene3D G3DSA:3.40.50.1820 31 252 5.9E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_01520 3d9c54fe2033839e8a32720e3a273323 420 Gene3D G3DSA:3.40.50.1820 337 420 1.3E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_09570 9b3ba5760087e50f792e3aba1e7c73e8 146 SUPERFAMILY SSF82649 15 144 7.85E-42 T 11-10-2018 XFC3_09570 9b3ba5760087e50f792e3aba1e7c73e8 146 Pfam PF02657 Fe-S metabolism associated domain 21 139 2.8E-42 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like XFC3_09570 9b3ba5760087e50f792e3aba1e7c73e8 146 Gene3D G3DSA:3.90.1010.10 11 146 8.2E-47 T 11-10-2018 XFC3_09025 26db6654def1b27821e86d968f787d33 349 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 175 202 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XFC3_09025 26db6654def1b27821e86d968f787d33 349 Gene3D G3DSA:3.40.50.720 163 318 6.8E-119 T 11-10-2018 XFC3_09025 26db6654def1b27821e86d968f787d33 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 140 2.6E-22 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XFC3_09025 26db6654def1b27821e86d968f787d33 349 SUPERFAMILY SSF51735 145 309 4.74E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_09025 26db6654def1b27821e86d968f787d33 349 SUPERFAMILY SSF50129 8 171 9.89E-45 T 11-10-2018 IPR011032 GroES-like superfamily XFC3_09025 26db6654def1b27821e86d968f787d33 349 Pfam PF00107 Zinc-binding dehydrogenase 182 303 6.3E-17 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XFC3_09025 26db6654def1b27821e86d968f787d33 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XFC3_09025 26db6654def1b27821e86d968f787d33 349 Gene3D G3DSA:3.90.180.10 11 338 6.8E-119 T 11-10-2018 XFC3_00865 77cc47610a77204fea877189c810e5e0 1193 SMART SM00481 7 88 4.0E-14 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal XFC3_00865 77cc47610a77204fea877189c810e5e0 1193 Gene3D G3DSA:3.20.20.140 1 281 1.9E-78 T 11-10-2018 XFC3_00865 77cc47610a77204fea877189c810e5e0 1193 Gene3D G3DSA:1.10.10.1600 443 527 9.4E-29 T 11-10-2018 XFC3_00865 77cc47610a77204fea877189c810e5e0 1193 Pfam PF14579 Helix-hairpin-helix motif 824 912 3.9E-26 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_00865 77cc47610a77204fea877189c810e5e0 1193 SUPERFAMILY SSF89550 6 272 7.26E-11 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 XFC3_00865 77cc47610a77204fea877189c810e5e0 1193 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 304 748 7.8E-169 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_00865 77cc47610a77204fea877189c810e5e0 1193 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1057 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_00865 77cc47610a77204fea877189c810e5e0 1193 Pfam PF01336 OB-fold nucleic acid binding domain 1026 1094 5.2E-8 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XFC3_00865 77cc47610a77204fea877189c810e5e0 1193 Pfam PF02811 PHP domain 8 183 1.5E-24 T 11-10-2018 IPR004013 PHP domain GO:0003824 XFC3_00865 77cc47610a77204fea877189c810e5e0 1193 SUPERFAMILY SSF50249 1020 1085 7.71E-5 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_07050 f79d9fad7e6c83493d0ed1e3bf190241 229 SUPERFAMILY SSF53067 107 214 1.42E-19 T 11-10-2018 XFC3_07050 f79d9fad7e6c83493d0ed1e3bf190241 229 Gene3D G3DSA:3.30.420.40 94 185 2.5E-64 T 11-10-2018 XFC3_07050 f79d9fad7e6c83493d0ed1e3bf190241 229 SUPERFAMILY SSF53067 3 102 9.06E-28 T 11-10-2018 XFC3_07050 f79d9fad7e6c83493d0ed1e3bf190241 229 Gene3D G3DSA:3.30.420.40 3 216 2.5E-64 T 11-10-2018 XFC3_07050 f79d9fad7e6c83493d0ed1e3bf190241 229 Pfam PF00814 Glycoprotease family 28 220 4.2E-29 T 11-10-2018 IPR000905 Gcp-like domain XFC3_07050 f79d9fad7e6c83493d0ed1e3bf190241 229 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 2.0E-51 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 SMART SM00436 131 226 2.0E-20 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 Pfam PF01751 Toprim domain 3 138 1.2E-17 T 11-10-2018 IPR006171 TOPRIM domain XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 Gene3D G3DSA:1.10.290.10 290 419 8.7E-151 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 Gene3D G3DSA:2.70.20.10 220 497 8.7E-151 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 Pfam PF01131 DNA topoisomerase 158 601 6.3E-106 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 SMART SM00493 1 131 8.7E-24 T 11-10-2018 IPR006171 TOPRIM domain XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 668 3.0E-202 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 SMART SM00437 281 567 1.1E-66 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 SUPERFAMILY SSF57783 625 670 9.69E-5 T 11-10-2018 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 SUPERFAMILY SSF56712 1 615 1.31E-169 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 Gene3D G3DSA:1.10.460.10 165 611 8.7E-151 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 Gene3D G3DSA:3.40.50.140 1 159 4.4E-53 T 11-10-2018 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 318 333 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 405 421 9.1E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 324 333 9.1E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 530 544 9.1E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 105 118 9.1E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFC3_04595 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 196 214 9.1E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFC3_11120 00337b858885f78da64cc5d6e8658398 496 Gene3D G3DSA:3.40.50.10260 4 215 3.0E-53 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 XFC3_11120 00337b858885f78da64cc5d6e8658398 496 Gene3D G3DSA:3.40.1190.20 219 491 9.1E-80 T 11-10-2018 IPR029056 Ribokinase-like XFC3_11120 00337b858885f78da64cc5d6e8658398 496 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 209 22.043 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 XFC3_11120 00337b858885f78da64cc5d6e8658398 496 SUPERFAMILY SSF53613 226 490 1.06E-73 T 11-10-2018 IPR029056 Ribokinase-like XFC3_11120 00337b858885f78da64cc5d6e8658398 496 PIRSF PIRSF017184 6 492 4.4E-118 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 XFC3_11120 00337b858885f78da64cc5d6e8658398 496 SUPERFAMILY SSF64153 7 246 6.93E-57 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 XFC3_11120 00337b858885f78da64cc5d6e8658398 496 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 430 440 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site XFC3_11120 00337b858885f78da64cc5d6e8658398 496 Pfam PF03853 YjeF-related protein N-terminus 30 186 1.9E-39 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 XFC3_11120 00337b858885f78da64cc5d6e8658398 496 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 314 324 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site XFC3_11120 00337b858885f78da64cc5d6e8658398 496 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 224 491 22.347 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 XFC3_11120 00337b858885f78da64cc5d6e8658398 496 Pfam PF01256 Carbohydrate kinase 247 482 3.1E-55 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 XFC3_11120 00337b858885f78da64cc5d6e8658398 496 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 11 209 1.3E-36 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 XFC3_11120 00337b858885f78da64cc5d6e8658398 496 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 223 491 1.4E-67 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 XFC3_11505 f36375b975430378b940f84fbb4e8247 207 SUPERFAMILY SSF52540 4 192 2.19E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11505 f36375b975430378b940f84fbb4e8247 207 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 6 181 8.9E-47 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 XFC3_11505 f36375b975430378b940f84fbb4e8247 207 Gene3D G3DSA:3.40.50.300 2 205 2.0E-57 T 11-10-2018 XFC3_11505 f36375b975430378b940f84fbb4e8247 207 Pfam PF01121 Dephospho-CoA kinase 5 181 4.6E-55 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 XFC3_11505 f36375b975430378b940f84fbb4e8247 207 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 199 24.893 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 XFC3_08485 31b4154d22f1f3e20c9b7007777b0cae 162 PRINTS PR01402 Mutator MutX protein signature 105 125 4.8E-8 T 11-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 XFC3_08485 31b4154d22f1f3e20c9b7007777b0cae 162 PRINTS PR01402 Mutator MutX protein signature 27 42 4.8E-8 T 11-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 XFC3_08485 31b4154d22f1f3e20c9b7007777b0cae 162 PRINTS PR01402 Mutator MutX protein signature 74 100 4.8E-8 T 11-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 XFC3_08485 31b4154d22f1f3e20c9b7007777b0cae 162 PRINTS PR01402 Mutator MutX protein signature 125 142 4.8E-8 T 11-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 XFC3_08485 31b4154d22f1f3e20c9b7007777b0cae 162 SUPERFAMILY SSF55811 3 138 1.12E-24 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XFC3_08485 31b4154d22f1f3e20c9b7007777b0cae 162 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XFC3_08485 31b4154d22f1f3e20c9b7007777b0cae 162 Gene3D G3DSA:3.90.79.10 9 154 1.3E-29 T 11-10-2018 XFC3_08485 31b4154d22f1f3e20c9b7007777b0cae 162 Pfam PF00293 NUDIX domain 13 134 1.1E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XFC3_08155 f4dd08db6d62d255a69c54bda5e28dc7 367 Pfam PF13531 Bacterial extracellular solute-binding protein 74 316 5.3E-41 T 11-10-2018 XFC3_08155 f4dd08db6d62d255a69c54bda5e28dc7 367 Gene3D G3DSA:3.40.190.10 62 332 2.0E-128 T 11-10-2018 XFC3_08155 f4dd08db6d62d255a69c54bda5e28dc7 367 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 53 363 7.3E-142 T 11-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 XFC3_08155 f4dd08db6d62d255a69c54bda5e28dc7 367 Gene3D G3DSA:3.40.190.10 150 362 2.0E-128 T 11-10-2018 XFC3_08155 f4dd08db6d62d255a69c54bda5e28dc7 367 SUPERFAMILY SSF53850 56 363 1.7E-84 T 11-10-2018 XFC3_08155 f4dd08db6d62d255a69c54bda5e28dc7 367 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 181 189 - T 11-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 XFC3_11835 6c74ac9f7daab89474b143bee0dd5308 132 SUPERFAMILY SSF52172 5 121 2.42E-17 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_11835 6c74ac9f7daab89474b143bee0dd5308 132 SMART SM00448 7 115 1.9E-6 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_11835 6c74ac9f7daab89474b143bee0dd5308 132 Gene3D G3DSA:3.40.50.2300 5 124 1.7E-26 T 11-10-2018 XFC3_11835 6c74ac9f7daab89474b143bee0dd5308 132 Pfam PF00072 Response regulator receiver domain 9 115 4.2E-7 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 SUPERFAMILY SSF50677 229 432 1.57E-49 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 7 878 23.302 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 434 590 2.6E-7 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 174 1.7E-26 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 636 674 3.0E-6 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 SUPERFAMILY SSF52374 7 684 1.17E-145 T 11-10-2018 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 Gene3D G3DSA:3.10.330.110 584 646 0.0 T 11-10-2018 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 Gene3D G3DSA:3.10.20.590 817 879 1.3E-20 T 11-10-2018 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 Gene3D G3DSA:3.40.50.620 36 583 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 Pfam PF08264 Anticodon-binding domain of tRNA 720 840 1.2E-14 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 Gene3D G3DSA:3.90.740.10 230 431 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 8 878 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 224 419 3.1E-68 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 SUPERFAMILY SSF47323 681 877 4.11E-31 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 Gene3D G3DSA:1.10.730.10 11 810 0.0 T 11-10-2018 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 541 563 6.6E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 156 172 6.6E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 188 201 6.6E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 130 147 6.6E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 504 522 6.6E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 574 584 6.6E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFC3_03955 a38fce53d3df116d2f4e5af95687205b 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 218 237 6.6E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 SUPERFAMILY SSF46955 403 474 7.87E-17 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 Gene3D G3DSA:2.40.50.140 39 153 4.0E-63 T 11-10-2018 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 SUPERFAMILY SSF55681 466 687 1.64E-47 T 11-10-2018 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 SUPERFAMILY SSF56037 196 391 1.62E-68 T 11-10-2018 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 SMART SM00874 402 470 6.8E-25 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 5.5E-226 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 Pfam PF03484 tRNA synthetase B5 domain 407 470 2.7E-16 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 Gene3D G3DSA:3.30.56.10 402 475 2.0E-22 T 11-10-2018 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 Pfam PF03483 B3/4 domain 212 384 4.1E-64 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 SMART SM00873 211 384 9.6E-84 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 SMART SM00896 698 791 2.5E-36 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 Gene3D G3DSA:3.50.40.10 197 393 2.9E-70 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 1.3E-25 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 SUPERFAMILY SSF50249 41 191 2.94E-41 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 Gene3D G3DSA:3.30.70.380 699 792 9.5E-25 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 45.274 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 Pfam PF01588 Putative tRNA binding domain 45 144 1.5E-22 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 Gene3D G3DSA:3.30.56.10 4 180 4.0E-63 T 11-10-2018 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 SUPERFAMILY SSF54991 693 791 1.96E-27 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 XFC3_11175 db409b498a4f0dec76e2a186239cce89 792 Gene3D G3DSA:3.30.930.10 488 688 2.9E-58 T 11-10-2018 XFC3_01800 2dd7a76d61bf6eeb139bae8ef8027bcf 148 Gene3D G3DSA:1.10.10.410 91 147 5.4E-19 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal XFC3_01800 2dd7a76d61bf6eeb139bae8ef8027bcf 148 SUPERFAMILY SSF89095 1 147 4.03E-43 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 XFC3_01800 2dd7a76d61bf6eeb139bae8ef8027bcf 148 Gene3D G3DSA:1.10.1510.10 1 90 5.5E-30 T 11-10-2018 XFC3_01800 2dd7a76d61bf6eeb139bae8ef8027bcf 148 Pfam PF09424 Yqey-like protein 4 146 1.7E-55 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 Gene3D G3DSA:1.10.601.10 119 452 4.3E-114 T 11-10-2018 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 Pfam PF04542 Sigma-70 region 2 383 452 1.4E-20 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 SUPERFAMILY SSF88659 513 615 7.2E-28 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 Gene3D G3DSA:1.10.10.10 533 616 2.1E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 SUPERFAMILY SSF88946 121 450 2.35E-96 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 Pfam PF04546 Sigma-70, non-essential region 145 352 1.3E-49 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 Gene3D G3DSA:1.10.10.10 456 532 3.9E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 Gene3D G3DSA:1.10.220.120 5 67 3.5E-27 T 11-10-2018 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 Pfam PF03979 Sigma-70 factor, region 1.1 7 87 1.9E-28 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 616 47.543 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 Pfam PF04545 Sigma-70, region 4 551 604 1.8E-19 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 SUPERFAMILY SSF88659 456 529 2.78E-21 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 407 420 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 PRINTS PR00046 Major sigma-70 factor signature 576 591 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 PRINTS PR00046 Major sigma-70 factor signature 591 602 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 PRINTS PR00046 Major sigma-70 factor signature 555 567 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 PRINTS PR00046 Major sigma-70 factor signature 407 420 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 PRINTS PR00046 Major sigma-70 factor signature 431 439 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 379 615 1.4E-120 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 Pfam PF04539 Sigma-70 region 3 462 537 1.3E-30 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 379 604 7.4E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 576 602 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFC3_08130 b365c3adedcf98be3a3e7c15d7f0a724 618 Pfam PF00140 Sigma-70 factor, region 1.2 104 135 5.1E-13 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XFC3_08000 989dd334fa2cd44b58465fcc54bc189b 180 PIRSF PIRSF005900 16 180 1.1E-46 T 11-10-2018 IPR002177 DNA-binding protein Dps XFC3_08000 989dd334fa2cd44b58465fcc54bc189b 180 Pfam PF00210 Ferritin-like domain 40 180 2.1E-28 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 XFC3_08000 989dd334fa2cd44b58465fcc54bc189b 180 ProSitePatterns PS00819 Dps protein family signature 2. 85 99 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 XFC3_08000 989dd334fa2cd44b58465fcc54bc189b 180 SUPERFAMILY SSF47240 22 180 1.45E-46 T 11-10-2018 IPR009078 Ferritin-like superfamily XFC3_08000 989dd334fa2cd44b58465fcc54bc189b 180 ProSitePatterns PS00818 Dps protein family signature 1. 59 75 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 XFC3_08000 989dd334fa2cd44b58465fcc54bc189b 180 Gene3D G3DSA:1.20.1260.10 2 180 8.0E-57 T 11-10-2018 IPR012347 Ferritin-like XFC3_08000 989dd334fa2cd44b58465fcc54bc189b 180 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 59 75 1.9E-12 T 11-10-2018 IPR002177 DNA-binding protein Dps XFC3_08000 989dd334fa2cd44b58465fcc54bc189b 180 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 83 99 1.9E-12 T 11-10-2018 IPR002177 DNA-binding protein Dps XFC3_08000 989dd334fa2cd44b58465fcc54bc189b 180 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 157 175 1.9E-12 T 11-10-2018 IPR002177 DNA-binding protein Dps XFC3_11530 ab76a67e0d0332dc40b9a4f640cfa2a1 155 SUPERFAMILY SSF54523 7 149 4.34E-28 T 11-10-2018 XFC3_11530 ab76a67e0d0332dc40b9a4f640cfa2a1 155 Pfam PF00114 Pilin (bacterial filament) 35 149 3.1E-23 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XFC3_11530 ab76a67e0d0332dc40b9a4f640cfa2a1 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.4E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_11530 ab76a67e0d0332dc40b9a4f640cfa2a1 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_11530 ab76a67e0d0332dc40b9a4f640cfa2a1 155 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 5.8E-12 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_11530 ab76a67e0d0332dc40b9a4f640cfa2a1 155 Gene3D G3DSA:3.30.700.10 7 150 2.0E-31 T 11-10-2018 XFC3_03530 7d25de34cf0b2ebdac52f4b008c5edb4 635 Gene3D G3DSA:3.40.50.920 497 621 3.0E-35 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XFC3_03530 7d25de34cf0b2ebdac52f4b008c5edb4 635 SUPERFAMILY SSF52518 319 505 1.03E-53 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFC3_03530 7d25de34cf0b2ebdac52f4b008c5edb4 635 SUPERFAMILY SSF52922 493 619 9.82E-26 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XFC3_03530 7d25de34cf0b2ebdac52f4b008c5edb4 635 ProSitePatterns PS00802 Transketolase signature 2. 427 443 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFC3_03530 7d25de34cf0b2ebdac52f4b008c5edb4 635 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 622 44.289 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFC3_03530 7d25de34cf0b2ebdac52f4b008c5edb4 635 SUPERFAMILY SSF52518 6 383 3.21E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFC3_03530 7d25de34cf0b2ebdac52f4b008c5edb4 635 SMART SM00861 321 485 3.5E-58 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XFC3_03530 7d25de34cf0b2ebdac52f4b008c5edb4 635 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 617 5.7E-247 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFC3_03530 7d25de34cf0b2ebdac52f4b008c5edb4 635 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFC3_03530 7d25de34cf0b2ebdac52f4b008c5edb4 635 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 285 5.6E-111 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFC3_03530 7d25de34cf0b2ebdac52f4b008c5edb4 635 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 1.9E-36 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XFC3_03530 7d25de34cf0b2ebdac52f4b008c5edb4 635 Gene3D G3DSA:3.40.50.970 318 492 1.8E-62 T 11-10-2018 XFC3_03530 7d25de34cf0b2ebdac52f4b008c5edb4 635 Pfam PF02780 Transketolase, C-terminal domain 498 613 4.1E-22 T 11-10-2018 IPR033248 Transketolase, C-terminal domain XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SUPERFAMILY SSF47807 166 280 2.09E-31 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 ProSitePatterns PS00447 DNA polymerase family A signature. 747 766 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Pfam PF00476 DNA polymerase family A 543 921 1.1E-142 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 TIGRFAM TIGR00593 pola: DNA polymerase I 4 923 2.8E-261 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SMART SM00482 679 887 1.1E-99 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:1.20.1060.10 536 651 3.9E-38 T 11-10-2018 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:1.10.150.20 702 845 1.2E-104 T 11-10-2018 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SMART SM00279 168 203 6.6E-13 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SUPERFAMILY SSF56672 518 923 5.89E-149 T 11-10-2018 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:3.30.420.10 321 534 1.1E-59 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:1.10.150.20 169 241 3.3E-85 T 11-10-2018 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SMART SM00474 323 510 1.1E-28 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:3.30.70.370 657 919 1.2E-104 T 11-10-2018 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 165 8.7E-44 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 648 670 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 838 854 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 716 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 747 772 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 723 736 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 671 686 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 784 795 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Pfam PF01612 3'-5' exonuclease 323 509 6.7E-31 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SUPERFAMILY SSF88723 1 165 1.79E-48 T 11-10-2018 IPR029060 PIN-like domain superfamily XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 260 1.1E-26 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SUPERFAMILY SSF53098 320 509 8.22E-47 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SMART SM00475 2 256 9.1E-103 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 XFC3_09170 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:3.40.50.1010 4 272 3.3E-85 T 11-10-2018 XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 247 5.4E-41 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 Pfam PF13662 Toprim domain 256 320 1.9E-14 T 11-10-2018 IPR006171 TOPRIM domain XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 SMART SM00766 443 570 1.9E-35 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:3.40.1360.10 237 363 1.2E-41 T 11-10-2018 XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 Pfam PF10410 DnaB-helicase binding domain of primase 365 418 2.2E-11 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 TIGRFAM TIGR01391 dnaG: DNA primase 3 413 5.5E-139 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:3.90.580.10 1 101 1.2E-36 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 Pfam PF01807 CHC2 zinc finger 5 100 1.2E-36 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 SUPERFAMILY SSF117023 440 573 1.11E-28 T 11-10-2018 XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 Hamap MF_00974 DNA primase [dnaG]. 3 571 28.081 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 SMART SM00493 255 326 2.0E-20 T 11-10-2018 IPR006171 TOPRIM domain XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:1.10.860.10 431 576 2.1E-30 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:1.20.50.20 364 419 2.7E-13 T 11-10-2018 XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 SUPERFAMILY SSF56731 113 417 6.8E-105 T 11-10-2018 XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:3.90.980.10 108 236 4.2E-39 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 SUPERFAMILY SSF57783 1 99 4.42E-35 T 11-10-2018 XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 Pfam PF08278 DNA primase DnaG DnaB-binding 446 569 3.1E-24 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 XFC3_01790 4e733205ec0475165c78beeab57ba83d 577 SMART SM00400 35 89 1.0E-29 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XFC3_06295 9676c3c56f2a8e6e5e2ac6016620598a 136 Gene3D G3DSA:2.60.120.10 1 130 1.0E-52 T 11-10-2018 IPR014710 RmlC-like jelly roll fold XFC3_06295 9676c3c56f2a8e6e5e2ac6016620598a 136 Pfam PF07883 Cupin domain 42 100 3.6E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel XFC3_06295 9676c3c56f2a8e6e5e2ac6016620598a 136 SUPERFAMILY SSF51182 7 129 2.96E-34 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily XFC3_11805 e79bebf2dd390d735f9c0436dfd116a3 116 SUPERFAMILY SSF55248 21 113 4.05E-31 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 XFC3_11805 e79bebf2dd390d735f9c0436dfd116a3 116 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 19 112 22.85 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 XFC3_11805 e79bebf2dd390d735f9c0436dfd116a3 116 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 21 110 2.1E-25 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 XFC3_11805 e79bebf2dd390d735f9c0436dfd116a3 116 Gene3D G3DSA:3.30.1360.20 20 115 5.2E-30 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 XFC3_02270 79cccec7e9c180cc176429d9af764f8c 346 SUPERFAMILY SSF51735 4 335 2.25E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_02270 79cccec7e9c180cc176429d9af764f8c 346 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 342 51.961 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 XFC3_02270 79cccec7e9c180cc176429d9af764f8c 346 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 332 1.3E-133 T 11-10-2018 IPR016040 NAD(P)-binding domain XFC3_02270 79cccec7e9c180cc176429d9af764f8c 346 Gene3D G3DSA:3.40.50.720 6 323 2.2E-143 T 11-10-2018 XFC3_02270 79cccec7e9c180cc176429d9af764f8c 346 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 338 5.4E-141 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 XFC3_02270 79cccec7e9c180cc176429d9af764f8c 346 Gene3D G3DSA:3.90.25.10 189 337 2.2E-143 T 11-10-2018 XFC3_12065 a98e872be7cc46bf2730cd4f74d2df6e 393 Gene3D G3DSA:3.30.1490.20 103 180 2.9E-26 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XFC3_12065 a98e872be7cc46bf2730cd4f74d2df6e 393 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 351 39.708 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 XFC3_12065 a98e872be7cc46bf2730cd4f74d2df6e 393 SUPERFAMILY SSF52440 3 95 1.18E-19 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XFC3_12065 a98e872be7cc46bf2730cd4f74d2df6e 393 SUPERFAMILY SSF51246 304 368 2.35E-15 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 XFC3_12065 a98e872be7cc46bf2730cd4f74d2df6e 393 Pfam PF02222 ATP-grasp domain 107 279 3.8E-53 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type XFC3_12065 a98e872be7cc46bf2730cd4f74d2df6e 393 Gene3D G3DSA:3.30.470.20 181 372 2.6E-66 T 11-10-2018 XFC3_12065 a98e872be7cc46bf2730cd4f74d2df6e 393 Gene3D G3DSA:3.40.50.20 1 102 3.1E-31 T 11-10-2018 XFC3_12065 a98e872be7cc46bf2730cd4f74d2df6e 393 SUPERFAMILY SSF56059 98 299 3.71E-59 T 11-10-2018 XFC3_12065 a98e872be7cc46bf2730cd4f74d2df6e 393 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 354 5.3E-109 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 ProSitePatterns PS00543 HlyD family secretion proteins signature. 437 459 - T 11-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 Pfam PF13437 HlyD family secretion protein 324 430 6.7E-19 T 11-10-2018 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 55 473 2.6E-121 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:2.40.50.100 94 128 1.6E-6 T 11-10-2018 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:2.40.50.100 325 361 2.4E-17 T 11-10-2018 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:1.10.287.470 259 324 2.4E-17 T 11-10-2018 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:1.10.287.470 129 221 1.6E-6 T 11-10-2018 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 437 452 5.4E-59 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 370 394 5.4E-59 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 337 358 5.4E-59 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 394 417 5.4E-59 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 452 472 5.4E-59 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 88 5.4E-59 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 107 127 5.4E-59 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:2.40.30.170 362 450 2.4E-17 T 11-10-2018 XFC3_02945 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:2.40.30.170 83 93 1.6E-6 T 11-10-2018 XFC3_01385 5b26237404d9d9b89ed029564a34f121 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 1.3E-8 T 11-10-2018 XFC3_01385 5b26237404d9d9b89ed029564a34f121 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 1.3E-8 T 11-10-2018 XFC3_01385 5b26237404d9d9b89ed029564a34f121 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 416 435 1.3E-8 T 11-10-2018 XFC3_01385 5b26237404d9d9b89ed029564a34f121 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 1.3E-8 T 11-10-2018 XFC3_01385 5b26237404d9d9b89ed029564a34f121 485 Pfam PF00361 Proton-conducting membrane transporter 129 422 2.7E-79 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01385 5b26237404d9d9b89ed029564a34f121 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 14 473 3.1E-141 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 XFC3_01385 5b26237404d9d9b89ed029564a34f121 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 11 474 18.086 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 XFC3_08275 10fedcdfb770e28c8b14fd9b39dcdfe1 346 SUPERFAMILY SSF111337 4 339 3.27E-130 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XFC3_08275 10fedcdfb770e28c8b14fd9b39dcdfe1 346 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 338 2.1E-126 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XFC3_08275 10fedcdfb770e28c8b14fd9b39dcdfe1 346 Pfam PF02547 Queuosine biosynthesis protein 4 338 2.6E-127 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XFC3_08275 10fedcdfb770e28c8b14fd9b39dcdfe1 346 Gene3D G3DSA:2.40.10.240 64 161 7.2E-113 T 11-10-2018 XFC3_08275 10fedcdfb770e28c8b14fd9b39dcdfe1 346 Gene3D G3DSA:3.40.1780.10 14 338 7.2E-113 T 11-10-2018 XFC3_08275 10fedcdfb770e28c8b14fd9b39dcdfe1 346 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 339 46.306 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XFC3_06685 5b7e4c1c513cd797c13ec3348e86651b 309 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 6.0E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFC3_06685 5b7e4c1c513cd797c13ec3348e86651b 309 Gene3D G3DSA:3.40.50.150 134 302 4.4E-33 T 11-10-2018 XFC3_06685 5b7e4c1c513cd797c13ec3348e86651b 309 Pfam PF08241 Methyltransferase domain 152 245 3.3E-22 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 XFC3_06685 5b7e4c1c513cd797c13ec3348e86651b 309 SMART SM00418 8 88 4.2E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFC3_06685 5b7e4c1c513cd797c13ec3348e86651b 309 Gene3D G3DSA:1.10.10.10 1 92 3.0E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_06685 5b7e4c1c513cd797c13ec3348e86651b 309 SUPERFAMILY SSF53335 127 293 1.11E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_06685 5b7e4c1c513cd797c13ec3348e86651b 309 SUPERFAMILY SSF46785 1 80 4.85E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_06685 5b7e4c1c513cd797c13ec3348e86651b 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.0E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFC3_06685 5b7e4c1c513cd797c13ec3348e86651b 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.0E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFC3_06685 5b7e4c1c513cd797c13ec3348e86651b 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.0E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFC3_08900 81b4cb3ecff5b39e1653e87305ea08e7 105 SUPERFAMILY SSF50104 4 102 1.81E-29 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily XFC3_08900 81b4cb3ecff5b39e1653e87305ea08e7 105 SMART SM00739 4 31 2.8E-7 T 11-10-2018 IPR005824 KOW XFC3_08900 81b4cb3ecff5b39e1653e87305ea08e7 105 Pfam PF00467 KOW motif 7 35 5.1E-8 T 11-10-2018 IPR005824 KOW XFC3_08900 81b4cb3ecff5b39e1653e87305ea08e7 105 Gene3D G3DSA:2.30.30.30 2 104 2.4E-34 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 XFC3_08900 81b4cb3ecff5b39e1653e87305ea08e7 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08900 81b4cb3ecff5b39e1653e87305ea08e7 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.273 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08900 81b4cb3ecff5b39e1653e87305ea08e7 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 103 4.1E-23 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08900 81b4cb3ecff5b39e1653e87305ea08e7 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.9E-34 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_02170 cd8389f4c6dd95df3d5cfeae3bdeba32 222 Pfam PF00551 Formyl transferase 9 185 3.5E-48 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFC3_02170 cd8389f4c6dd95df3d5cfeae3bdeba32 222 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 9 196 2.0E-59 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 XFC3_02170 cd8389f4c6dd95df3d5cfeae3bdeba32 222 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 9 192 26.099 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 XFC3_02170 cd8389f4c6dd95df3d5cfeae3bdeba32 222 Gene3D G3DSA:3.40.50.170 1 207 1.0E-67 T 11-10-2018 XFC3_02170 cd8389f4c6dd95df3d5cfeae3bdeba32 222 SUPERFAMILY SSF53328 8 199 2.62E-56 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFC3_01080 55b0b3758a4e5a68af5d63106120ef3d 608 SUPERFAMILY SSF52540 78 364 4.53E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01080 55b0b3758a4e5a68af5d63106120ef3d 608 Gene3D G3DSA:3.40.50.300 217 434 4.0E-53 T 11-10-2018 XFC3_01080 55b0b3758a4e5a68af5d63106120ef3d 608 Gene3D G3DSA:3.40.50.300 2 215 1.7E-75 T 11-10-2018 XFC3_01080 55b0b3758a4e5a68af5d63106120ef3d 608 SMART SM00487 28 226 2.0E-62 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_01080 55b0b3758a4e5a68af5d63106120ef3d 608 Gene3D G3DSA:3.30.70.330 497 569 2.1E-13 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily XFC3_01080 55b0b3758a4e5a68af5d63106120ef3d 608 Pfam PF00271 Helicase conserved C-terminal domain 235 343 1.1E-29 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_01080 55b0b3758a4e5a68af5d63106120ef3d 608 Pfam PF00270 DEAD/DEAH box helicase 34 198 6.9E-50 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFC3_01080 55b0b3758a4e5a68af5d63106120ef3d 608 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 4 568 46.703 T 11-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 XFC3_01080 55b0b3758a4e5a68af5d63106120ef3d 608 Pfam PF03880 DbpA RNA binding domain 497 566 7.9E-23 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain XFC3_01080 55b0b3758a4e5a68af5d63106120ef3d 608 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 157 165 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XFC3_01080 55b0b3758a4e5a68af5d63106120ef3d 608 SMART SM00490 262 343 2.3E-34 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_08195 0886756ef9fb44e6bfefb5a0676a5e75 394 SUPERFAMILY SSF56796 14 368 3.14E-109 T 11-10-2018 XFC3_08195 0886756ef9fb44e6bfefb5a0676a5e75 394 Gene3D G3DSA:1.20.1090.10 180 373 7.6E-62 T 11-10-2018 XFC3_08195 0886756ef9fb44e6bfefb5a0676a5e75 394 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 18 366 9.7E-110 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 XFC3_08195 0886756ef9fb44e6bfefb5a0676a5e75 394 Pfam PF01761 3-dehydroquinate synthase 74 337 2.2E-102 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 XFC3_08195 0886756ef9fb44e6bfefb5a0676a5e75 394 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 368 66.278 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 XFC3_08195 0886756ef9fb44e6bfefb5a0676a5e75 394 PIRSF PIRSF001455 24 376 2.1E-104 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 XFC3_08195 0886756ef9fb44e6bfefb5a0676a5e75 394 Gene3D G3DSA:3.40.50.1970 3 179 1.4E-60 T 11-10-2018 XFC3_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 4.7E-23 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 XFC3_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 SMART SM01232 131 223 2.6E-43 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 XFC3_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 Gene3D G3DSA:3.20.190.10 2 130 4.2E-36 T 11-10-2018 IPR035937 MutM-like, N-terminal XFC3_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF57716 219 270 4.56E-15 T 11-10-2018 XFC3_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 Gene3D G3DSA:1.10.8.50 141 270 6.2E-43 T 11-10-2018 XFC3_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF81624 2 136 6.67E-38 T 11-10-2018 IPR035937 MutM-like, N-terminal XFC3_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 1.2E-87 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 XFC3_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF46946 132 223 1.31E-28 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 XFC3_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 XFC3_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 SMART SM00898 2 117 5.1E-49 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 XFC3_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 41.633 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 XFC3_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 7.9E-31 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 XFC3_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 4.7E-23 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 XFC3_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 SMART SM01232 131 223 2.6E-43 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 XFC3_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 Gene3D G3DSA:3.20.190.10 2 130 4.2E-36 T 11-10-2018 IPR035937 MutM-like, N-terminal XFC3_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF57716 219 270 4.56E-15 T 11-10-2018 XFC3_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 Gene3D G3DSA:1.10.8.50 141 270 6.2E-43 T 11-10-2018 XFC3_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF81624 2 136 6.67E-38 T 11-10-2018 IPR035937 MutM-like, N-terminal XFC3_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 1.2E-87 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 XFC3_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF46946 132 223 1.31E-28 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 XFC3_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 XFC3_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 SMART SM00898 2 117 5.1E-49 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 XFC3_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 41.633 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 XFC3_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 7.9E-31 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 XFC3_09520 cc06fc0e5c7b436963f6c36701d5d70b 415 Gene3D G3DSA:3.40.309.10 224 372 9.1E-157 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XFC3_09520 cc06fc0e5c7b436963f6c36701d5d70b 415 PIRSF PIRSF000151 1 415 2.3E-170 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 XFC3_09520 cc06fc0e5c7b436963f6c36701d5d70b 415 Gene3D G3DSA:3.40.605.10 16 409 9.1E-157 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XFC3_09520 cc06fc0e5c7b436963f6c36701d5d70b 415 Pfam PF00171 Aldehyde dehydrogenase family 6 281 1.2E-12 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XFC3_09520 cc06fc0e5c7b436963f6c36701d5d70b 415 SUPERFAMILY SSF53720 2 414 4.71E-110 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XFC3_09520 cc06fc0e5c7b436963f6c36701d5d70b 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 40.486 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XFC3_09520 cc06fc0e5c7b436963f6c36701d5d70b 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 12 402 2.0E-137 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XFC3_09520 cc06fc0e5c7b436963f6c36701d5d70b 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XFC3_05065 413a7326a5aed014d189d771fa4f2ff8 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 416 3.4E-92 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 XFC3_05065 413a7326a5aed014d189d771fa4f2ff8 432 Gene3D G3DSA:3.40.1190.10 1 284 1.4E-83 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFC3_05065 413a7326a5aed014d189d771fa4f2ff8 432 Gene3D G3DSA:3.90.190.20 286 422 2.3E-23 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFC3_05065 413a7326a5aed014d189d771fa4f2ff8 432 Pfam PF08245 Mur ligase middle domain 48 191 6.7E-10 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XFC3_05065 413a7326a5aed014d189d771fa4f2ff8 432 SUPERFAMILY SSF53623 4 282 7.33E-84 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFC3_05065 413a7326a5aed014d189d771fa4f2ff8 432 SUPERFAMILY SSF53244 286 421 8.97E-25 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFC3_05065 413a7326a5aed014d189d771fa4f2ff8 432 PIRSF PIRSF001563 1 424 8.7E-99 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 XFC3_07805 897840002b91d54c9d7e85974263d941 297 PRINTS PR00169 Potassium channel signature 95 115 2.0E-28 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XFC3_07805 897840002b91d54c9d7e85974263d941 297 PRINTS PR00169 Potassium channel signature 27 55 2.0E-28 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XFC3_07805 897840002b91d54c9d7e85974263d941 297 PRINTS PR00169 Potassium channel signature 160 183 2.0E-28 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XFC3_07805 897840002b91d54c9d7e85974263d941 297 PRINTS PR00169 Potassium channel signature 218 244 2.0E-28 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XFC3_07805 897840002b91d54c9d7e85974263d941 297 PRINTS PR00169 Potassium channel signature 69 92 2.0E-28 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XFC3_07805 897840002b91d54c9d7e85974263d941 297 PRINTS PR00169 Potassium channel signature 189 211 2.0E-28 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XFC3_07805 897840002b91d54c9d7e85974263d941 297 PRINTS PR00169 Potassium channel signature 131 157 2.0E-28 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XFC3_07805 897840002b91d54c9d7e85974263d941 297 Pfam PF00520 Ion transport protein 34 235 5.3E-29 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 XFC3_07805 897840002b91d54c9d7e85974263d941 297 Gene3D G3DSA:1.10.287.70 34 246 3.8E-52 T 11-10-2018 XFC3_07805 897840002b91d54c9d7e85974263d941 297 SUPERFAMILY SSF81324 30 244 2.35E-52 T 11-10-2018 XFC3_03495 44880734a54e395a522f20a83cbb86fd 688 Gene3D G3DSA:2.120.10.30 180 420 1.2E-17 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XFC3_03495 44880734a54e395a522f20a83cbb86fd 688 Gene3D G3DSA:2.120.10.30 19 178 2.4E-20 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XFC3_03495 44880734a54e395a522f20a83cbb86fd 688 SUPERFAMILY SSF82171 33 416 1.96E-34 T 11-10-2018 XFC3_03495 44880734a54e395a522f20a83cbb86fd 688 Pfam PF00326 Prolyl oligopeptidase family 478 687 9.5E-60 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 XFC3_03495 44880734a54e395a522f20a83cbb86fd 688 Gene3D G3DSA:3.40.50.1820 421 688 2.3E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_03495 44880734a54e395a522f20a83cbb86fd 688 Pfam PF07676 WD40-like Beta Propeller Repeat 90 114 0.0053 T 11-10-2018 IPR011659 WD40-like Beta Propeller XFC3_03495 44880734a54e395a522f20a83cbb86fd 688 Pfam PF07676 WD40-like Beta Propeller Repeat 281 303 0.019 T 11-10-2018 IPR011659 WD40-like Beta Propeller XFC3_03495 44880734a54e395a522f20a83cbb86fd 688 SUPERFAMILY SSF53474 431 686 1.12E-68 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_03660 b3e3bf78b179408d1a83f31974685f0f 466 Gene3D G3DSA:3.40.50.800 365 460 2.8E-22 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily XFC3_03660 b3e3bf78b179408d1a83f31974685f0f 466 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 448 1.1E-114 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 XFC3_03660 b3e3bf78b179408d1a83f31974685f0f 466 Gene3D G3DSA:3.30.930.10 1 362 1.3E-100 T 11-10-2018 XFC3_03660 b3e3bf78b179408d1a83f31974685f0f 466 PIRSF PIRSF001549 1 460 5.2E-132 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 XFC3_03660 b3e3bf78b179408d1a83f31974685f0f 466 Pfam PF13393 Histidyl-tRNA synthetase 9 350 1.2E-29 T 11-10-2018 XFC3_03660 b3e3bf78b179408d1a83f31974685f0f 466 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 458 27.942 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 XFC3_03660 b3e3bf78b179408d1a83f31974685f0f 466 SUPERFAMILY SSF55681 4 358 4.78E-69 T 11-10-2018 XFC3_03660 b3e3bf78b179408d1a83f31974685f0f 466 Pfam PF03129 Anticodon binding domain 369 457 2.3E-12 T 11-10-2018 IPR004154 Anticodon-binding XFC3_03660 b3e3bf78b179408d1a83f31974685f0f 466 SUPERFAMILY SSF52954 366 457 1.06E-20 T 11-10-2018 XFC3_00395 82b7e4d0f5c58a3ffcaf239c925da0b8 126 SUPERFAMILY SSF64076 4 122 2.22E-27 T 11-10-2018 IPR036748 MTH938-like superfamily XFC3_00395 82b7e4d0f5c58a3ffcaf239c925da0b8 126 Gene3D G3DSA:3.40.1230.10 14 123 1.5E-28 T 11-10-2018 IPR036748 MTH938-like superfamily XFC3_00395 82b7e4d0f5c58a3ffcaf239c925da0b8 126 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 20 121 5.4E-22 T 11-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein XFC3_08140 9ebb2127152b3d5c7e29aa7ef447026a 348 SMART SM00382 27 214 7.2E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_08140 9ebb2127152b3d5c7e29aa7ef447026a 348 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_08140 9ebb2127152b3d5c7e29aa7ef447026a 348 SUPERFAMILY SSF52540 3 243 7.72E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08140 9ebb2127152b3d5c7e29aa7ef447026a 348 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 2.4E-111 T 11-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 XFC3_08140 9ebb2127152b3d5c7e29aa7ef447026a 348 Gene3D G3DSA:3.40.50.300 3 248 2.0E-77 T 11-10-2018 XFC3_08140 9ebb2127152b3d5c7e29aa7ef447026a 348 Pfam PF12857 TOBE-like domain 284 337 2.2E-6 T 11-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 XFC3_08140 9ebb2127152b3d5c7e29aa7ef447026a 348 SUPERFAMILY SSF50331 240 340 1.36E-7 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal XFC3_08140 9ebb2127152b3d5c7e29aa7ef447026a 348 Pfam PF00005 ABC transporter 19 164 7.3E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_07815 c01043d4dcfd60bb82c0e6a1d065daef 262 Pfam PF10411 Disulfide bond isomerase protein N-terminus 47 99 7.2E-16 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal XFC3_07815 c01043d4dcfd60bb82c0e6a1d065daef 262 Gene3D G3DSA:3.40.30.10 98 255 4.1E-46 T 11-10-2018 XFC3_07815 c01043d4dcfd60bb82c0e6a1d065daef 262 Pfam PF13098 Thioredoxin-like domain 129 251 1.9E-24 T 11-10-2018 IPR012336 Thioredoxin-like fold XFC3_07815 c01043d4dcfd60bb82c0e6a1d065daef 262 Gene3D G3DSA:3.10.450.70 40 97 2.0E-10 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 XFC3_07815 c01043d4dcfd60bb82c0e6a1d065daef 262 SUPERFAMILY SSF54423 53 100 1.41E-10 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 XFC3_07815 c01043d4dcfd60bb82c0e6a1d065daef 262 SUPERFAMILY SSF52833 112 253 7.04E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_09415 d90699a843223813c682aad756ad3d9b 234 Hamap MF_00052_B Ribonuclease HII [rnhB]. 17 198 35.945 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 XFC3_09415 d90699a843223813c682aad756ad3d9b 234 Pfam PF01351 Ribonuclease HII 19 197 3.1E-35 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain XFC3_09415 d90699a843223813c682aad756ad3d9b 234 SUPERFAMILY SSF53098 12 219 1.32E-65 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFC3_09415 d90699a843223813c682aad756ad3d9b 234 Gene3D G3DSA:3.30.420.10 2 230 4.3E-73 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFC3_12315 158c818fcaef7c786767f185b6b4d97b 464 Pfam PF13555 P-loop containing region of AAA domain 22 82 4.7E-24 T 11-10-2018 XFC3_12315 158c818fcaef7c786767f185b6b4d97b 464 Gene3D G3DSA:3.40.1140.10 18 206 7.6E-8 T 11-10-2018 XFC3_12315 158c818fcaef7c786767f185b6b4d97b 464 SUPERFAMILY SSF52540 21 391 1.29E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_05165 3ac16ff6b3340def7dbfe618241037c8 323 Pfam PF02445 Quinolinate synthetase A protein 32 322 6.8E-113 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 XFC3_05165 3ac16ff6b3340def7dbfe618241037c8 323 Gene3D G3DSA:3.40.50.10800 32 304 9.7E-112 T 11-10-2018 XFC3_05165 3ac16ff6b3340def7dbfe618241037c8 323 Hamap MF_00568 Quinolinate synthase A [nadA]. 27 323 43.677 T 11-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 XFC3_05165 3ac16ff6b3340def7dbfe618241037c8 323 Gene3D G3DSA:3.40.50.10800 112 321 9.7E-112 T 11-10-2018 XFC3_05165 3ac16ff6b3340def7dbfe618241037c8 323 Gene3D G3DSA:3.40.50.10800 195 279 9.7E-112 T 11-10-2018 XFC3_05165 3ac16ff6b3340def7dbfe618241037c8 323 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 30 323 2.2E-97 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 XFC3_05165 3ac16ff6b3340def7dbfe618241037c8 323 SUPERFAMILY SSF142754 30 322 3.66E-110 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 XFC3_10435 4dfbd9812d7dc780a365b5e122870a2c 420 PIRSF PIRSF038885 8 419 5.6E-140 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 XFC3_10435 4dfbd9812d7dc780a365b5e122870a2c 420 SUPERFAMILY SSF81648 294 409 5.76E-26 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 XFC3_10435 4dfbd9812d7dc780a365b5e122870a2c 420 Pfam PF00033 Cytochrome b/b6/petB 32 219 1.8E-66 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 XFC3_10435 4dfbd9812d7dc780a365b5e122870a2c 420 SUPERFAMILY SSF81342 24 293 6.44E-87 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 XFC3_10435 4dfbd9812d7dc780a365b5e122870a2c 420 Gene3D G3DSA:1.20.810.10 6 419 1.5E-133 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 XFC3_10435 4dfbd9812d7dc780a365b5e122870a2c 420 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 291 394 4.3E-33 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 XFC3_05860 955bdaf421cac725aa1b7ff7ef4f63d4 547 PIRSF PIRSF028503 1 547 0.0 T 11-10-2018 IPR016889 Uncharacterised conserved protein UCP028503 XFC3_05860 955bdaf421cac725aa1b7ff7ef4f63d4 547 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 6 153 4.1E-21 T 11-10-2018 IPR017482 Putative phage-type endonuclease XFC3_05860 955bdaf421cac725aa1b7ff7ef4f63d4 547 Gene3D G3DSA:3.90.320.10 6 195 6.4E-20 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal XFC3_05860 955bdaf421cac725aa1b7ff7ef4f63d4 547 SUPERFAMILY SSF52980 1 154 6.43E-21 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XFC3_05860 955bdaf421cac725aa1b7ff7ef4f63d4 547 Pfam PF09588 YqaJ-like viral recombinase domain 12 147 1.3E-9 T 11-10-2018 IPR019080 YqaJ viral recombinase XFC3_06470 0e1b91cb0d5029c2c1b4869286135118 348 SUPERFAMILY SSF51735 147 311 1.21E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_06470 0e1b91cb0d5029c2c1b4869286135118 348 SMART SM00829 10 341 7.0E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XFC3_06470 0e1b91cb0d5029c2c1b4869286135118 348 Gene3D G3DSA:3.90.180.10 12 341 3.8E-129 T 11-10-2018 XFC3_06470 0e1b91cb0d5029c2c1b4869286135118 348 SUPERFAMILY SSF50129 7 170 1.67E-50 T 11-10-2018 IPR011032 GroES-like superfamily XFC3_06470 0e1b91cb0d5029c2c1b4869286135118 348 Gene3D G3DSA:3.40.50.720 158 313 3.8E-129 T 11-10-2018 XFC3_06470 0e1b91cb0d5029c2c1b4869286135118 348 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 177 204 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XFC3_06470 0e1b91cb0d5029c2c1b4869286135118 348 Pfam PF00107 Zinc-binding dehydrogenase 184 305 4.0E-22 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XFC3_06470 0e1b91cb0d5029c2c1b4869286135118 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XFC3_06470 0e1b91cb0d5029c2c1b4869286135118 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 142 2.8E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XFC3_08365 d0e8dbd50222915c8fad7be0d20b22b4 547 Gene3D G3DSA:3.30.70.20 446 542 3.9E-34 T 11-10-2018 XFC3_08365 d0e8dbd50222915c8fad7be0d20b22b4 547 SUPERFAMILY SSF54373 215 309 1.88E-30 T 11-10-2018 XFC3_08365 d0e8dbd50222915c8fad7be0d20b22b4 547 Pfam PF01946 Thi4 family 15 62 1.2E-6 T 11-10-2018 XFC3_08365 d0e8dbd50222915c8fad7be0d20b22b4 547 SUPERFAMILY SSF54862 447 546 4.74E-24 T 11-10-2018 XFC3_08365 d0e8dbd50222915c8fad7be0d20b22b4 547 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 446 545 6.3E-43 T 11-10-2018 XFC3_08365 d0e8dbd50222915c8fad7be0d20b22b4 547 Gene3D G3DSA:3.30.9.90 86 433 9.7E-158 T 11-10-2018 XFC3_08365 d0e8dbd50222915c8fad7be0d20b22b4 547 Gene3D G3DSA:3.50.50.60 18 383 9.7E-158 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_08365 d0e8dbd50222915c8fad7be0d20b22b4 547 SUPERFAMILY SSF51905 12 388 7.21E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 SUPERFAMILY SSF52374 115 451 3.75E-89 T 11-10-2018 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 SUPERFAMILY SSF47323 436 562 1.37E-34 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 121 136 2.4E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 160 173 2.4E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 136 152 2.4E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 308 329 2.4E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 131 140 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 27 562 2.7E-126 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 Gene3D G3DSA:1.10.730.10 436 562 1.4E-152 T 11-10-2018 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 23 92 1.8E-22 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 Pfam PF00750 tRNA synthetases class I (R) 103 410 3.5E-27 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 Gene3D G3DSA:3.30.1360.70 4 112 4.2E-23 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 Gene3D G3DSA:3.40.50.620 122 435 1.4E-152 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 SUPERFAMILY SSF55190 5 112 2.22E-25 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 Pfam PF05746 DALR anticodon binding domain 441 562 1.0E-33 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 562 24.692 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 SMART SM01016 3 92 4.1E-34 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFC3_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 SMART SM00836 441 562 2.6E-44 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 XFC3_07015 0eaa274e79915a4699f8d3a1cb9bb11e 229 SMART SM00100 17 136 3.1E-20 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain XFC3_07015 0eaa274e79915a4699f8d3a1cb9bb11e 229 Pfam PF00325 Bacterial regulatory proteins, crp family 185 216 8.3E-14 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XFC3_07015 0eaa274e79915a4699f8d3a1cb9bb11e 229 ProSitePatterns PS00042 Crp-type HTH domain signature. 187 210 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 XFC3_07015 0eaa274e79915a4699f8d3a1cb9bb11e 229 SMART SM00419 179 227 2.5E-12 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XFC3_07015 0eaa274e79915a4699f8d3a1cb9bb11e 229 Gene3D G3DSA:1.10.10.10 158 226 2.0E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_07015 0eaa274e79915a4699f8d3a1cb9bb11e 229 SUPERFAMILY SSF46785 158 226 1.12E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_07015 0eaa274e79915a4699f8d3a1cb9bb11e 229 Pfam PF00027 Cyclic nucleotide-binding domain 35 122 4.3E-18 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain XFC3_07015 0eaa274e79915a4699f8d3a1cb9bb11e 229 Gene3D G3DSA:2.60.120.10 24 157 8.6E-49 T 11-10-2018 IPR014710 RmlC-like jelly roll fold XFC3_07015 0eaa274e79915a4699f8d3a1cb9bb11e 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 201 216 2.5E-6 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XFC3_07015 0eaa274e79915a4699f8d3a1cb9bb11e 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 185 201 2.5E-6 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XFC3_07015 0eaa274e79915a4699f8d3a1cb9bb11e 229 SUPERFAMILY SSF51206 23 154 3.27E-24 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like XFC3_11470 7b39ab98c0721accccd0a6a663a884c1 472 Gene3D G3DSA:3.40.50.300 243 469 8.8E-17 T 11-10-2018 XFC3_11470 7b39ab98c0721accccd0a6a663a884c1 472 SUPERFAMILY SSF52540 2 202 2.13E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11470 7b39ab98c0721accccd0a6a663a884c1 472 SUPERFAMILY SSF52540 117 454 4.06E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11470 7b39ab98c0721accccd0a6a663a884c1 472 Gene3D G3DSA:3.40.50.10810 4 225 3.2E-23 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily XFC3_11470 7b39ab98c0721accccd0a6a663a884c1 472 SMART SM00487 2 188 5.8E-7 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_11470 7b39ab98c0721accccd0a6a663a884c1 472 Pfam PF00176 SNF2 family N-terminal domain 25 265 4.7E-16 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 Gene3D G3DSA:3.30.360.10 151 316 1.6E-147 T 11-10-2018 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 SUPERFAMILY SSF55347 151 314 1.84E-73 T 11-10-2018 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 PIRSF PIRSF000149 1 334 4.5E-125 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 5.7E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 5.7E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 5.7E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 5.7E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 5.7E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 SMART SM00846 3 152 2.4E-93 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 2.3E-62 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 1.5E-128 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 2.5E-36 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 Gene3D G3DSA:3.40.50.720 4 327 1.6E-147 T 11-10-2018 XFC3_01895 64d2dc7b886a406a39170048043c58ed 334 SUPERFAMILY SSF51735 3 168 2.85E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_09865 30f9d8a1528458c3cde239c74a488035 528 SMART SM01040 288 376 5.6E-38 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_09865 30f9d8a1528458c3cde239c74a488035 528 SMART SM01040 42 130 2.4E-27 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_09865 30f9d8a1528458c3cde239c74a488035 528 SMART SM01040 172 258 2.2E-39 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_09865 30f9d8a1528458c3cde239c74a488035 528 Pfam PF02498 BRO family, N-terminal domain 289 376 5.1E-24 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_09865 30f9d8a1528458c3cde239c74a488035 528 Pfam PF02498 BRO family, N-terminal domain 43 130 9.0E-18 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_09865 30f9d8a1528458c3cde239c74a488035 528 Pfam PF02498 BRO family, N-terminal domain 173 258 6.8E-23 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_12105 454a9a99dc37f5419afb9f764df25ed6 633 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 19 578 2.5E-156 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 XFC3_12105 454a9a99dc37f5419afb9f764df25ed6 633 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 358 549 3.9E-52 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 XFC3_12105 454a9a99dc37f5419afb9f764df25ed6 633 SUPERFAMILY SSF52096 331 537 1.43E-38 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFC3_12105 454a9a99dc37f5419afb9f764df25ed6 633 SUPERFAMILY SSF52096 39 290 3.85E-18 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFC3_12105 454a9a99dc37f5419afb9f764df25ed6 633 Gene3D G3DSA:3.40.1750.10 189 507 1.8E-151 T 11-10-2018 XFC3_12105 454a9a99dc37f5419afb9f764df25ed6 633 Gene3D G3DSA:3.90.226.10 322 550 1.8E-151 T 11-10-2018 XFC3_12105 454a9a99dc37f5419afb9f764df25ed6 633 Pfam PF01343 Peptidase family S49 143 297 7.1E-23 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 XFC3_12105 454a9a99dc37f5419afb9f764df25ed6 633 Pfam PF01343 Peptidase family S49 400 551 1.8E-47 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 XFC3_12105 454a9a99dc37f5419afb9f764df25ed6 633 PIRSF PIRSF001217 10 633 8.1E-196 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 XFC3_12105 454a9a99dc37f5419afb9f764df25ed6 633 Gene3D G3DSA:3.90.226.10 98 321 1.8E-151 T 11-10-2018 XFC3_07225 2afbdfc8648737189e2cc3ec6e985002 683 SUPERFAMILY SSF56935 40 683 3.92E-90 T 11-10-2018 XFC3_07225 2afbdfc8648737189e2cc3ec6e985002 683 Gene3D G3DSA:2.40.170.20 188 683 4.9E-64 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XFC3_07225 2afbdfc8648737189e2cc3ec6e985002 683 Gene3D G3DSA:2.170.130.10 56 174 7.4E-15 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFC3_07225 2afbdfc8648737189e2cc3ec6e985002 683 Pfam PF00593 TonB dependent receptor 246 681 2.5E-36 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFC3_07225 2afbdfc8648737189e2cc3ec6e985002 683 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 165 1.6E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 Pfam PF00204 DNA gyrase B 218 384 3.4E-38 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 627 46.196 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 SMART SM00433 34 623 2.6E-201 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 Gene3D G3DSA:3.30.565.10 3 215 1.1E-73 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 413 427 1.6E-57 T 11-10-2018 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 516 528 1.6E-57 T 11-10-2018 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.6E-57 T 11-10-2018 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.6E-57 T 11-10-2018 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 265 278 1.6E-57 T 11-10-2018 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 496 513 1.6E-57 T 11-10-2018 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.6E-57 T 11-10-2018 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 478 494 1.6E-57 T 11-10-2018 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 561 577 1.6E-57 T 11-10-2018 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 SUPERFAMILY SSF54211 217 380 4.55E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 SMART SM00387 27 173 2.0E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 Pfam PF01751 Toprim domain 412 510 5.2E-12 T 11-10-2018 IPR006171 TOPRIM domain XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 619 4.9E-23 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 SUPERFAMILY SSF56719 387 620 9.42E-74 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 Gene3D G3DSA:3.40.50.670 389 622 5.1E-85 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 Gene3D G3DSA:3.30.230.10 218 388 9.8E-56 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 SUPERFAMILY SSF55874 4 215 3.8E-65 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 4 623 3.3E-285 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08415 4bfeb83773cc2ef20821a95f0bf7512c 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 2.2E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_01235 cc9d91eeb29b5433fdf3c5be0894c170 72 SUPERFAMILY SSF89447 3 43 5.41E-11 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily XFC3_01235 cc9d91eeb29b5433fdf3c5be0894c170 72 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 42 2.4E-9 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XFC3_01235 cc9d91eeb29b5433fdf3c5be0894c170 72 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 4 43 1.7E-12 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XFC3_01235 cc9d91eeb29b5433fdf3c5be0894c170 72 SMART SM00966 3 48 8.4E-11 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XFC3_01235 cc9d91eeb29b5433fdf3c5be0894c170 72 Gene3D G3DSA:2.10.260.10 2 41 1.7E-11 T 11-10-2018 XFC3_02485 a616de1145c9958c4df370f2caa8b12d 435 SUPERFAMILY SSF56037 315 429 3.92E-25 T 11-10-2018 XFC3_02485 a616de1145c9958c4df370f2caa8b12d 435 Gene3D G3DSA:1.20.59.20 228 310 7.4E-15 T 11-10-2018 XFC3_02485 a616de1145c9958c4df370f2caa8b12d 435 Pfam PF09179 TilS substrate binding domain 240 307 1.2E-13 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XFC3_02485 a616de1145c9958c4df370f2caa8b12d 435 SUPERFAMILY SSF82829 229 311 4.19E-18 T 11-10-2018 XFC3_02485 a616de1145c9958c4df370f2caa8b12d 435 SMART SM00977 354 427 2.1E-19 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XFC3_02485 a616de1145c9958c4df370f2caa8b12d 435 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 354 400 3.8E-17 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XFC3_02485 a616de1145c9958c4df370f2caa8b12d 435 SUPERFAMILY SSF52402 11 222 7.28E-53 T 11-10-2018 XFC3_02485 a616de1145c9958c4df370f2caa8b12d 435 Pfam PF01171 PP-loop family 15 190 2.1E-58 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 XFC3_02485 a616de1145c9958c4df370f2caa8b12d 435 Gene3D G3DSA:3.40.50.620 7 224 8.5E-63 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_02485 a616de1145c9958c4df370f2caa8b12d 435 Pfam PF11734 TilS substrate C-terminal domain 356 427 9.6E-20 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XFC3_02485 a616de1145c9958c4df370f2caa8b12d 435 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 299 20.967 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XFC3_02485 a616de1145c9958c4df370f2caa8b12d 435 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 15 195 8.7E-49 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XFC3_06935 6b070b189daa5e6a9a15c363fff8e5f9 295 Pfam PF07120 Protein of unknown function (DUF1376) 2 85 8.9E-32 T 11-10-2018 IPR010781 Protein of unknown function DUF1376 XFC3_12325 aa0014e9a70edc8e880f7dd1bd7eada2 364 Pfam PF13558 Putative exonuclease SbcCD, C subunit 212 302 3.1E-22 T 11-10-2018 XFC3_05760 4f746013fa116689323b0f86dc7d3161 370 Pfam PF02498 BRO family, N-terminal domain 14 100 5.8E-21 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_05760 4f746013fa116689323b0f86dc7d3161 370 Pfam PF02498 BRO family, N-terminal domain 131 218 6.0E-25 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_05760 4f746013fa116689323b0f86dc7d3161 370 SMART SM01040 13 100 1.4E-32 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_05760 4f746013fa116689323b0f86dc7d3161 370 SMART SM01040 130 218 1.8E-36 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_04965 22e6e2c108ec721c996693764d6fb90d 338 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 195 4.9E-9 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XFC3_04965 22e6e2c108ec721c996693764d6fb90d 338 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 253 333 1.0E-19 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XFC3_04965 22e6e2c108ec721c996693764d6fb90d 338 Gene3D G3DSA:3.40.47.10 1 198 2.2E-69 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_04965 22e6e2c108ec721c996693764d6fb90d 338 Gene3D G3DSA:3.40.47.10 199 338 1.4E-35 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_04965 22e6e2c108ec721c996693764d6fb90d 338 SUPERFAMILY SSF53901 41 338 6.47E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_05015 fa1f999fe536d3d7d35fd6ce3d064780 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 312 2.4E-145 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XFC3_05015 fa1f999fe536d3d7d35fd6ce3d064780 314 SUPERFAMILY SSF56059 124 311 6.06E-51 T 11-10-2018 XFC3_05015 fa1f999fe536d3d7d35fd6ce3d064780 314 Gene3D G3DSA:3.30.1490.20 138 202 7.1E-105 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XFC3_05015 fa1f999fe536d3d7d35fd6ce3d064780 314 Gene3D G3DSA:3.30.470.20 116 296 7.1E-105 T 11-10-2018 XFC3_05015 fa1f999fe536d3d7d35fd6ce3d064780 314 SUPERFAMILY SSF52440 3 122 2.65E-36 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XFC3_05015 fa1f999fe536d3d7d35fd6ce3d064780 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 145.837 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XFC3_05015 fa1f999fe536d3d7d35fd6ce3d064780 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 3.0E-37 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XFC3_05015 fa1f999fe536d3d7d35fd6ce3d064780 314 Gene3D G3DSA:3.40.50.20 8 115 7.1E-105 T 11-10-2018 XFC3_05015 fa1f999fe536d3d7d35fd6ce3d064780 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 7.8E-73 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XFC3_05480 b69bb85fa5d7d3afe92aa3e726b5311b 357 Pfam PF05707 Zonular occludens toxin (Zot) 1 187 1.4E-54 T 11-10-2018 IPR008900 Zona occludens toxin XFC3_05480 b69bb85fa5d7d3afe92aa3e726b5311b 357 Gene3D G3DSA:3.40.50.300 1 188 4.6E-45 T 11-10-2018 XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 Pfam PF00271 Helicase conserved C-terminal domain 856 955 5.6E-16 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 153 1129 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 SUPERFAMILY SSF52540 20 352 3.08E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 27 1159 27.88 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 Gene3D G3DSA:3.40.50.300 588 827 1.8E-231 T 11-10-2018 XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 SUPERFAMILY SSF52540 370 511 1.53E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 SMART SM00487 646 836 3.0E-34 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 SMART SM01058 525 622 4.2E-48 T 11-10-2018 IPR003711 CarD-like/TRCF domain XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 SUPERFAMILY SSF143517 1048 1192 6.41E-40 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 SUPERFAMILY SSF52540 828 1036 5.78E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 SUPERFAMILY SSF52540 569 829 7.53E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 SMART SM00982 1055 1155 9.7E-45 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 Gene3D G3DSA:3.40.50.300 525 1036 1.8E-231 T 11-10-2018 XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 Pfam PF00270 DEAD/DEAH box helicase 651 808 9.7E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 Pfam PF03461 TRCF domain 1056 1147 1.1E-24 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 Gene3D G3DSA:3.90.1150.50 1051 1193 4.8E-39 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 Gene3D G3DSA:3.40.50.11180 28 346 7.6E-107 T 11-10-2018 XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 SMART SM00490 872 956 5.0E-18 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 Pfam PF02559 CarD-like/TRCF domain 526 619 1.5E-24 T 11-10-2018 IPR003711 CarD-like/TRCF domain XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 Gene3D G3DSA:3.40.50.11140 369 434 1.7E-7 T 11-10-2018 XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 Gene3D G3DSA:2.30.30.840 529 587 1.8E-231 T 11-10-2018 XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 SUPERFAMILY SSF141259 517 594 2.48E-21 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily XFC3_00185 a31a8b92c392c22664b97bca3539f6bc 1194 Gene3D G3DSA:3.30.2060.10 135 220 7.6E-107 T 11-10-2018 XFC3_10390 fb13f2ed0c5d4b979c263d2968e69d18 214 Gene3D G3DSA:2.160.10.10 99 214 8.2E-19 T 11-10-2018 XFC3_10390 fb13f2ed0c5d4b979c263d2968e69d18 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 74 102 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XFC3_10390 fb13f2ed0c5d4b979c263d2968e69d18 214 SUPERFAMILY SSF51161 32 212 3.91E-29 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFC3_10390 fb13f2ed0c5d4b979c263d2968e69d18 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XFC3_10390 fb13f2ed0c5d4b979c263d2968e69d18 214 Gene3D G3DSA:2.160.10.10 27 98 1.6E-12 T 11-10-2018 XFC3_10390 fb13f2ed0c5d4b979c263d2968e69d18 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XFC3_10390 fb13f2ed0c5d4b979c263d2968e69d18 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 122 150 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XFC3_10390 fb13f2ed0c5d4b979c263d2968e69d18 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 85 117 4.6E-5 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_10390 fb13f2ed0c5d4b979c263d2968e69d18 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 49 81 1.1E-6 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_10390 fb13f2ed0c5d4b979c263d2968e69d18 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 155 189 3.0E-5 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_07955 53c81677378175ece1ad20627e40fdc0 332 Pfam PF00348 Polyprenyl synthetase 42 273 4.0E-74 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 XFC3_07955 53c81677378175ece1ad20627e40fdc0 332 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site XFC3_07955 53c81677378175ece1ad20627e40fdc0 332 Gene3D G3DSA:1.10.600.10 3 331 2.2E-103 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily XFC3_07955 53c81677378175ece1ad20627e40fdc0 332 SUPERFAMILY SSF48576 14 332 4.14E-92 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily XFC3_03600 992c4d8e98b481aeaf6ec92821ce7af2 794 Pfam PF00905 Penicillin binding protein transpeptidase domain 314 533 3.4E-12 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XFC3_03600 992c4d8e98b481aeaf6ec92821ce7af2 794 SUPERFAMILY SSF53955 50 268 5.06E-61 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_03600 992c4d8e98b481aeaf6ec92821ce7af2 794 SUPERFAMILY SSF56601 219 641 2.41E-94 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFC3_03600 992c4d8e98b481aeaf6ec92821ce7af2 794 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 706 790 2.2E-15 T 11-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_03600 992c4d8e98b481aeaf6ec92821ce7af2 794 Pfam PF00912 Transglycosylase 71 237 3.5E-44 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_03600 992c4d8e98b481aeaf6ec92821ce7af2 794 Gene3D G3DSA:3.40.710.10 264 618 2.0E-67 T 11-10-2018 XFC3_03600 992c4d8e98b481aeaf6ec92821ce7af2 794 Gene3D G3DSA:1.10.3810.10 66 260 2.4E-48 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_03600 992c4d8e98b481aeaf6ec92821ce7af2 794 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 50 792 2.8E-224 T 11-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 Gene3D G3DSA:1.10.1740.60 244 340 1.2E-43 T 11-10-2018 XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 227 242 1.0E-16 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 347 359 1.0E-16 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 311 1.0E-16 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 328 343 1.0E-16 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 1.0E-16 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 Pfam PF01433 Peptidase family M1 domain 253 465 6.9E-49 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 Gene3D G3DSA:1.10.390.10 341 495 3.0E-43 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 Gene3D G3DSA:1.25.40.320 497 637 1.2E-39 T 11-10-2018 IPR038502 Peptidase M1 LTA-4 hydrolase/aminopeptidase, C-terminal domain superfamily XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 Gene3D G3DSA:2.60.40.1730 57 243 1.5E-57 T 11-10-2018 XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 SUPERFAMILY SSF63737 45 244 2.35E-38 T 11-10-2018 XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 525 635 3.1E-27 T 11-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 SUPERFAMILY SSF48371 503 636 4.78E-39 T 11-10-2018 IPR016024 Armadillo-type fold XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 SMART SM01263 497 636 2.4E-49 T 11-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 XFC3_07260 1625c2f196ec79cb28a5951203e7580b 651 SUPERFAMILY SSF55486 249 491 6.89E-66 T 11-10-2018 XFC3_11185 ff70ff89d24723f68dffd1ef7bc883c1 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.4E-48 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11185 ff70ff89d24723f68dffd1ef7bc883c1 119 Gene3D G3DSA:1.10.720.90 2 55 2.9E-21 T 11-10-2018 XFC3_11185 ff70ff89d24723f68dffd1ef7bc883c1 119 Pfam PF00453 Ribosomal protein L20 3 109 3.1E-48 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11185 ff70ff89d24723f68dffd1ef7bc883c1 119 SUPERFAMILY SSF74731 3 117 3.56E-49 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11185 ff70ff89d24723f68dffd1ef7bc883c1 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11185 ff70ff89d24723f68dffd1ef7bc883c1 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.372 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11185 ff70ff89d24723f68dffd1ef7bc883c1 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.1E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11185 ff70ff89d24723f68dffd1ef7bc883c1 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.1E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11185 ff70ff89d24723f68dffd1ef7bc883c1 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.1E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11185 ff70ff89d24723f68dffd1ef7bc883c1 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 2.0E-21 T 11-10-2018 XFC3_11185 ff70ff89d24723f68dffd1ef7bc883c1 119 Gene3D G3DSA:1.10.1900.20 56 118 9.8E-28 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_06555 ab765d792bffb598b30ad808840b2d01 248 Pfam PF00912 Transglycosylase 74 231 6.9E-43 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_06555 ab765d792bffb598b30ad808840b2d01 248 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 21 242 40.66 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_06555 ab765d792bffb598b30ad808840b2d01 248 SUPERFAMILY SSF53955 67 240 8.15E-54 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_06555 ab765d792bffb598b30ad808840b2d01 248 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 23 239 1.4E-79 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_06555 ab765d792bffb598b30ad808840b2d01 248 Gene3D G3DSA:1.10.3810.10 67 240 3.3E-45 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_02525 681cc15536af261cba0d2b415d9c5ca3 317 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 12 311 5.9E-34 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain XFC3_02525 681cc15536af261cba0d2b415d9c5ca3 317 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 8 296 2.0E-93 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 XFC3_02525 681cc15536af261cba0d2b415d9c5ca3 317 Gene3D G3DSA:3.30.70.250 130 202 2.2E-93 T 11-10-2018 XFC3_02525 681cc15536af261cba0d2b415d9c5ca3 317 Gene3D G3DSA:3.40.366.10 11 291 2.2E-93 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 XFC3_02525 681cc15536af261cba0d2b415d9c5ca3 317 Pfam PF00698 Acyl transferase domain 11 282 9.2E-39 T 11-10-2018 IPR014043 Acyl transferase XFC3_02525 681cc15536af261cba0d2b415d9c5ca3 317 SUPERFAMILY SSF55048 135 202 1.7E-14 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding XFC3_02525 681cc15536af261cba0d2b415d9c5ca3 317 SUPERFAMILY SSF52151 9 312 1.67E-71 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XFC3_02525 681cc15536af261cba0d2b415d9c5ca3 317 PIRSF PIRSF000446 6 314 4.6E-96 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 Gene3D G3DSA:3.50.30.20 2 150 1.8E-57 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 Pfam PF00117 Glutamine amidotransferase class-I 193 368 8.5E-45 T 11-10-2018 IPR017926 Glutamine amidotransferase XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 Gene3D G3DSA:3.40.50.880 151 372 5.4E-73 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 SUPERFAMILY SSF52317 153 372 3.82E-61 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 SUPERFAMILY SSF52021 4 148 1.05E-55 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 260 271 3.3E-11 T 11-10-2018 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 232 241 3.3E-11 T 11-10-2018 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 345 358 3.3E-11 T 11-10-2018 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 371 8.5E-143 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 374 47.325 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 PRINTS PR00097 Anthranilate synthase component II signature 232 241 1.1E-5 T 11-10-2018 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 PRINTS PR00097 Anthranilate synthase component II signature 260 271 1.1E-5 T 11-10-2018 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 PRINTS PR00097 Anthranilate synthase component II signature 345 358 1.1E-5 T 11-10-2018 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 131 3.4E-51 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 SMART SM01097 3 133 1.0E-87 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 260 276 2.4E-37 T 11-10-2018 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 190 204 2.4E-37 T 11-10-2018 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 277 294 2.4E-37 T 11-10-2018 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 302 313 2.4E-37 T 11-10-2018 XFC3_09155 55ed0d84c841a00da7004e5f077433ab 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 229 243 2.4E-37 T 11-10-2018 XFC3_07040 f8a3083b265021704708f23ad2d82ae1 429 Gene3D G3DSA:1.10.230.10 269 379 1.2E-143 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain XFC3_07040 f8a3083b265021704708f23ad2d82ae1 429 PIRSF PIRSF001369 38 429 1.9E-159 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type XFC3_07040 f8a3083b265021704708f23ad2d82ae1 429 ProSitePatterns PS00480 Citrate synthase signature. 306 318 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 XFC3_07040 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 362 378 4.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 XFC3_07040 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 382 396 4.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 XFC3_07040 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 166 179 4.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 XFC3_07040 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 299 319 4.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 XFC3_07040 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 220 235 4.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 XFC3_07040 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 242 270 4.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 XFC3_07040 f8a3083b265021704708f23ad2d82ae1 429 Gene3D G3DSA:1.10.580.10 58 414 1.2E-143 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 XFC3_07040 f8a3083b265021704708f23ad2d82ae1 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 425 4.7E-201 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 XFC3_07040 f8a3083b265021704708f23ad2d82ae1 429 Gene3D G3DSA:2.20.28.60 5 51 1.4E-14 T 11-10-2018 XFC3_07040 f8a3083b265021704708f23ad2d82ae1 429 SUPERFAMILY SSF48256 9 427 1.96E-160 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 XFC3_07040 f8a3083b265021704708f23ad2d82ae1 429 Pfam PF00285 Citrate synthase, C-terminal domain 47 414 5.2E-134 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 XFC3_05970 ed9829387356fc9ee72481ace53b4c28 283 SUPERFAMILY SSF53328 88 283 2.49E-60 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFC3_05970 ed9829387356fc9ee72481ace53b4c28 283 Gene3D G3DSA:3.30.70.260 1 85 7.7E-26 T 11-10-2018 XFC3_05970 ed9829387356fc9ee72481ace53b4c28 283 Gene3D G3DSA:3.40.50.170 87 282 4.9E-69 T 11-10-2018 XFC3_05970 ed9829387356fc9ee72481ace53b4c28 283 SUPERFAMILY SSF55021 2 84 2.96E-18 T 11-10-2018 XFC3_05970 ed9829387356fc9ee72481ace53b4c28 283 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 282 1.4E-100 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFC3_05970 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 8.8E-52 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFC3_05970 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 8.8E-52 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFC3_05970 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 8.8E-52 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFC3_05970 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 8.8E-52 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFC3_05970 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 8.8E-52 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFC3_05970 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 8.8E-52 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFC3_05970 ed9829387356fc9ee72481ace53b4c28 283 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 282 46.85 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFC3_05970 ed9829387356fc9ee72481ace53b4c28 283 Pfam PF00551 Formyl transferase 88 264 5.0E-38 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFC3_05970 ed9829387356fc9ee72481ace53b4c28 283 PIRSF PIRSF036480 2 283 2.3E-107 T 11-10-2018 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1538 1576 1.9E-10 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF06594 Haemolysin-type calcium binding protein related domain 865 909 4.1E-12 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1372 1416 3.1E-11 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1206 1250 3.1E-11 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1040 1084 3.1E-11 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 SUPERFAMILY SSF51120 1259 1416 1.03E-25 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 SUPERFAMILY SSF51120 709 907 1.99E-31 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1432 1450 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 SUPERFAMILY SSF51120 1425 1574 7.72E-26 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Gene3D G3DSA:2.150.10.10 1310 1425 8.4E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Gene3D G3DSA:2.150.10.10 769 914 7.9E-29 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Gene3D G3DSA:2.150.10.10 1144 1254 1.5E-21 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Gene3D G3DSA:2.150.10.10 1475 1590 1.5E-28 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Gene3D G3DSA:2.150.10.10 709 768 7.6E-18 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Gene3D G3DSA:2.150.10.10 979 1087 1.9E-21 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 984 1000 0.1 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 753 770 0.0034 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1504 1519 66.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1095 1111 0.13 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 781 797 0.068 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1261 1277 0.13 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 956 972 0.19 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 920 936 0.13 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1482 1498 0.1 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1150 1166 0.1 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 717 734 0.13 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 831 846 66.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1279 1295 0.11 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1454 1470 0.46 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1316 1332 0.1 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 736 752 0.0092 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 809 825 0.1 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1427 1443 0.13 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1122 1138 0.21 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Gene3D G3DSA:2.150.10.10 1426 1474 8.4E-11 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 SUPERFAMILY SSF51120 1093 1250 4.19E-26 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 PRINTS PR00313 NodO calcium binding signature 760 771 9.7E-10 T 11-10-2018 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 PRINTS PR00313 NodO calcium binding signature 790 798 9.7E-10 T 11-10-2018 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 PRINTS PR00313 NodO calcium binding signature 772 780 9.7E-10 T 11-10-2018 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 PRINTS PR00313 NodO calcium binding signature 965 974 9.7E-10 T 11-10-2018 XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 SUPERFAMILY SSF51120 918 1084 2.75E-23 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1266 1284 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1100 1118 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 759 777 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Gene3D G3DSA:2.150.10.10 1088 1143 1.9E-12 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Gene3D G3DSA:2.150.10.10 1255 1309 7.8E-13 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02515 2ac18908473a7b5494285b5066ff6cd4 1613 Gene3D G3DSA:2.150.10.10 916 978 4.0E-12 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_07735 2f59ce3ed405aff5f2d3182dabea94d9 72 SMART SM00316 4 72 1.7E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFC3_07735 2f59ce3ed405aff5f2d3182dabea94d9 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.9E-26 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 XFC3_07735 2f59ce3ed405aff5f2d3182dabea94d9 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 9.9E-37 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 XFC3_07735 2f59ce3ed405aff5f2d3182dabea94d9 72 SUPERFAMILY SSF50249 1 70 1.01E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_07735 2f59ce3ed405aff5f2d3182dabea94d9 72 Gene3D G3DSA:2.40.50.140 1 72 2.1E-36 T 11-10-2018 XFC3_07735 2f59ce3ed405aff5f2d3182dabea94d9 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.187 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 XFC3_08890 25698774577e94c8918d1aa7d9cb6714 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08890 25698774577e94c8918d1aa7d9cb6714 132 SUPERFAMILY SSF56047 2 131 2.35E-40 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08890 25698774577e94c8918d1aa7d9cb6714 132 Gene3D G3DSA:3.30.1490.10 76 131 8.5E-21 T 11-10-2018 XFC3_08890 25698774577e94c8918d1aa7d9cb6714 132 Pfam PF00410 Ribosomal protein S8 5 131 6.0E-42 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08890 25698774577e94c8918d1aa7d9cb6714 132 Gene3D G3DSA:3.30.1370.30 2 74 9.3E-23 T 11-10-2018 XFC3_08890 25698774577e94c8918d1aa7d9cb6714 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 28.273 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_01770 1f29bd8a4df72e5a470f33d5c8657e92 1242 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 4 1238 17.937 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 XFC3_01770 1f29bd8a4df72e5a470f33d5c8657e92 1242 Gene3D G3DSA:3.40.50.300 497 887 1.2E-94 T 11-10-2018 XFC3_01770 1f29bd8a4df72e5a470f33d5c8657e92 1242 Pfam PF13361 UvrD-like helicase C-terminal domain 609 688 1.0E-6 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XFC3_01770 1f29bd8a4df72e5a470f33d5c8657e92 1242 Gene3D G3DSA:1.10.486.10 640 783 1.2E-94 T 11-10-2018 XFC3_01770 1f29bd8a4df72e5a470f33d5c8657e92 1242 Pfam PF00580 UvrD/REP helicase N-terminal domain 13 486 4.6E-53 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 XFC3_01770 1f29bd8a4df72e5a470f33d5c8657e92 1242 Gene3D G3DSA:3.90.320.10 932 1241 1.4E-65 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal XFC3_01770 1f29bd8a4df72e5a470f33d5c8657e92 1242 Pfam PF13361 UvrD-like helicase C-terminal domain 784 880 1.3E-15 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XFC3_01770 1f29bd8a4df72e5a470f33d5c8657e92 1242 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1128 1183 3.1E-5 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type XFC3_01770 1f29bd8a4df72e5a470f33d5c8657e92 1242 SUPERFAMILY SSF52540 11 882 9.12E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01770 1f29bd8a4df72e5a470f33d5c8657e92 1242 SUPERFAMILY SSF52980 943 1239 9.65E-55 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XFC3_01770 1f29bd8a4df72e5a470f33d5c8657e92 1242 Gene3D G3DSA:3.40.50.300 288 491 6.8E-28 T 11-10-2018 XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 Gene3D G3DSA:3.30.250.10 271 345 6.9E-25 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 326 5.1E-165 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 SUPERFAMILY SSF52540 6 269 2.27E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 SUPERFAMILY SSF54752 270 327 5.76E-20 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 Hamap MF_00268 Protein RecA [recA]. 5 331 50.397 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 Gene3D G3DSA:3.40.50.300 30 270 4.7E-78 T 11-10-2018 XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 127 156 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 212 240 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 165 194 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 299 316 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 93 122 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 245 274 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 SMART SM00382 57 230 1.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 ProSitePatterns PS00321 recA signature. 215 223 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 XFC3_00500 f90e6c4c541278d6a60fbfaf42573156 347 Pfam PF00154 recA bacterial DNA recombination protein 7 270 2.0E-139 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFC3_10410 33eeb5a91ebcce3f4cfa9ddf8e220847 126 SUPERFAMILY SSF47413 8 62 2.69E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_10410 33eeb5a91ebcce3f4cfa9ddf8e220847 126 Gene3D G3DSA:1.10.260.40 6 75 2.9E-12 T 11-10-2018 XFC3_10410 33eeb5a91ebcce3f4cfa9ddf8e220847 126 SMART SM00530 12 71 4.5E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_10410 33eeb5a91ebcce3f4cfa9ddf8e220847 126 Pfam PF01381 Helix-turn-helix 13 66 1.9E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_10255 91baebf0043e0100deb831224dd88df0 200 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 7.5E-57 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFC3_10255 91baebf0043e0100deb831224dd88df0 200 Gene3D G3DSA:2.40.30.20 1 89 2.3E-24 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFC3_10255 91baebf0043e0100deb831224dd88df0 200 SUPERFAMILY SSF63380 1 88 2.04E-22 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XFC3_10255 91baebf0043e0100deb831224dd88df0 200 Pfam PF00677 Lumazine binding domain 100 184 1.6E-23 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFC3_10255 91baebf0043e0100deb831224dd88df0 200 Pfam PF00677 Lumazine binding domain 3 87 1.1E-18 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFC3_10255 91baebf0043e0100deb831224dd88df0 200 SUPERFAMILY SSF63380 93 194 3.06E-31 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XFC3_10255 91baebf0043e0100deb831224dd88df0 200 Gene3D G3DSA:2.40.30.20 102 200 4.6E-33 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFC3_10255 91baebf0043e0100deb831224dd88df0 200 PIRSF PIRSF000498 1 200 3.1E-73 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:1.10.150.20 435 494 1.5E-15 T 11-10-2018 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:3.30.300.20 282 351 8.0E-25 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF50249 135 203 4.18E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:1.10.150.20 356 425 2.2E-27 T 11-10-2018 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 Pfam PF13184 NusA-like KH domain 234 301 1.1E-27 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 29.335 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:3.30.1480.10 1 133 3.4E-39 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 2.7E-124 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 SMART SM00322 305 368 0.025 T 11-10-2018 IPR004087 K Homology domain GO:0003676 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 SMART SM00322 234 297 18.0 T 11-10-2018 IPR004087 K Homology domain GO:0003676 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 Pfam PF08529 NusA N-terminal domain 4 128 3.6E-34 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 Pfam PF14520 Helix-hairpin-helix domain 437 492 1.7E-4 T 11-10-2018 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF47794 361 419 2.04E-15 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF47794 434 493 2.35E-7 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:3.30.300.20 203 281 7.5E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:2.40.50.140 139 202 1.8E-20 T 11-10-2018 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 5.5E-22 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF69705 1 130 1.09E-35 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF54814 205 282 1.63E-29 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 Pfam PF00575 S1 RNA binding domain 137 199 4.6E-9 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF54814 283 346 1.31E-14 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XFC3_01005 75d14377d20abddb16e08dd9005b6e59 503 SMART SM00316 137 204 1.6E-9 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFC3_00335 bd531ce47f729a502e8c85a139770605 266 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 109 126 - T 11-10-2018 IPR018046 Pili assembly chaperone, conserved site XFC3_00335 bd531ce47f729a502e8c85a139770605 266 SUPERFAMILY SSF49354 27 166 1.57E-43 T 11-10-2018 IPR008962 PapD-like superfamily XFC3_00335 bd531ce47f729a502e8c85a139770605 266 Gene3D G3DSA:2.60.40.10 33 167 2.1E-45 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFC3_00335 bd531ce47f729a502e8c85a139770605 266 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 31 167 5.4E-48 T 11-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 XFC3_00335 bd531ce47f729a502e8c85a139770605 266 PRINTS PR00969 Pili chaperone signature 184 199 9.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XFC3_00335 bd531ce47f729a502e8c85a139770605 266 PRINTS PR00969 Pili chaperone signature 110 127 9.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XFC3_00335 bd531ce47f729a502e8c85a139770605 266 PRINTS PR00969 Pili chaperone signature 81 102 9.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XFC3_00335 bd531ce47f729a502e8c85a139770605 266 PRINTS PR00969 Pili chaperone signature 148 163 9.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XFC3_00335 bd531ce47f729a502e8c85a139770605 266 PRINTS PR00969 Pili chaperone signature 32 41 9.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XFC3_00335 bd531ce47f729a502e8c85a139770605 266 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 189 256 1.0E-14 T 11-10-2018 IPR016148 Pili assembly chaperone, C-terminal XFC3_00335 bd531ce47f729a502e8c85a139770605 266 Gene3D G3DSA:2.60.40.10 169 265 3.5E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFC3_00335 bd531ce47f729a502e8c85a139770605 266 SUPERFAMILY SSF49584 160 258 7.98E-16 T 11-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XFC3_02110 b0c424e03aa019a951029076f1dd0d24 266 Gene3D G3DSA:3.30.2010.10 165 260 1.4E-15 T 11-10-2018 XFC3_02110 b0c424e03aa019a951029076f1dd0d24 266 Pfam PF01863 Protein of unknown function DUF45 45 248 2.9E-50 T 11-10-2018 IPR002725 Protein of unknown function DUF45 XFC3_11710 69cb8b6388e24d4b83315a33ddc75f5b 266 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 XFC3_11710 69cb8b6388e24d4b83315a33ddc75f5b 266 Gene3D G3DSA:1.10.287.610 103 150 3.5E-86 T 11-10-2018 XFC3_11710 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.8E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11710 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.8E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11710 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.8E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11710 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.8E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11710 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.8E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11710 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.8E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11710 69cb8b6388e24d4b83315a33ddc75f5b 266 Pfam PF00318 Ribosomal protein S2 9 224 1.9E-88 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11710 69cb8b6388e24d4b83315a33ddc75f5b 266 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 39.201 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11710 69cb8b6388e24d4b83315a33ddc75f5b 266 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 XFC3_11710 69cb8b6388e24d4b83315a33ddc75f5b 266 SUPERFAMILY SSF52313 6 231 6.67E-89 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily XFC3_11710 69cb8b6388e24d4b83315a33ddc75f5b 266 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 3.5E-96 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11710 69cb8b6388e24d4b83315a33ddc75f5b 266 Gene3D G3DSA:3.40.50.10490 8 219 3.5E-86 T 11-10-2018 XFC3_11115 8fd046639e5f9158be88feb9298250e0 162 SUPERFAMILY SSF52540 28 125 1.11E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11115 8fd046639e5f9158be88feb9298250e0 162 Gene3D G3DSA:3.40.50.300 1 150 1.5E-32 T 11-10-2018 XFC3_11115 8fd046639e5f9158be88feb9298250e0 162 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 7 136 1.6E-31 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 XFC3_11115 8fd046639e5f9158be88feb9298250e0 162 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 125 7.3E-29 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 XFC3_06025 67c0591984c2098ceac94bcc9d53fc95 519 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 206 219 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XFC3_06025 67c0591984c2098ceac94bcc9d53fc95 519 SUPERFAMILY SSF51569 8 298 3.91E-94 T 11-10-2018 XFC3_06025 67c0591984c2098ceac94bcc9d53fc95 519 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XFC3_06025 67c0591984c2098ceac94bcc9d53fc95 519 Pfam PF00682 HMGL-like 11 279 4.3E-89 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 XFC3_06025 67c0591984c2098ceac94bcc9d53fc95 519 SMART SM00917 376 504 2.0E-26 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XFC3_06025 67c0591984c2098ceac94bcc9d53fc95 519 SUPERFAMILY SSF110921 405 503 3.4E-21 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XFC3_06025 67c0591984c2098ceac94bcc9d53fc95 519 Pfam PF08502 LeuA allosteric (dimerisation) domain 377 504 5.5E-29 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XFC3_06025 67c0591984c2098ceac94bcc9d53fc95 519 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 9 513 39.643 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XFC3_06025 67c0591984c2098ceac94bcc9d53fc95 519 Gene3D G3DSA:3.30.160.270 400 505 1.6E-10 T 11-10-2018 XFC3_06025 67c0591984c2098ceac94bcc9d53fc95 519 Gene3D G3DSA:1.10.238.260 287 399 6.2E-35 T 11-10-2018 XFC3_06025 67c0591984c2098ceac94bcc9d53fc95 519 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 11 501 2.2E-193 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XFC3_06025 67c0591984c2098ceac94bcc9d53fc95 519 Gene3D G3DSA:3.20.20.70 9 283 1.5E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_07045 baa11d6f0af740a1134440847a5ad937 80 PRINTS PR01249 Ribosomal protein L31 signature 60 78 2.3E-18 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_07045 baa11d6f0af740a1134440847a5ad937 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.3E-18 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_07045 baa11d6f0af740a1134440847a5ad937 80 PRINTS PR01249 Ribosomal protein L31 signature 45 60 2.3E-18 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_07045 baa11d6f0af740a1134440847a5ad937 80 Gene3D G3DSA:2.30.170.50 1 80 1.3E-25 T 11-10-2018 XFC3_07045 baa11d6f0af740a1134440847a5ad937 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.3E-20 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_07045 baa11d6f0af740a1134440847a5ad937 80 Pfam PF01197 Ribosomal protein L31 1 79 1.1E-29 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_07045 baa11d6f0af740a1134440847a5ad937 80 SUPERFAMILY SSF143800 1 79 7.06E-23 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_07045 baa11d6f0af740a1134440847a5ad937 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_07045 baa11d6f0af740a1134440847a5ad937 80 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.973 T 11-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_00690 243894afd62ef5ef27f6aa50ebcbe6ee 471 SUPERFAMILY SSF51261 171 418 1.1E-69 T 11-10-2018 IPR011055 Duplicated hybrid motif XFC3_00690 243894afd62ef5ef27f6aa50ebcbe6ee 471 Pfam PF04225 Opacity-associated protein A LysM-like domain 97 164 8.0E-7 T 11-10-2018 IPR007340 Opacity-associated protein A XFC3_00690 243894afd62ef5ef27f6aa50ebcbe6ee 471 Pfam PF01551 Peptidase family M23 320 416 8.8E-33 T 11-10-2018 IPR016047 Peptidase M23 XFC3_00690 243894afd62ef5ef27f6aa50ebcbe6ee 471 Gene3D G3DSA:2.70.70.10 293 422 4.0E-86 T 11-10-2018 IPR011055 Duplicated hybrid motif XFC3_00690 243894afd62ef5ef27f6aa50ebcbe6ee 471 Gene3D G3DSA:3.10.450.350 89 178 1.6E-13 T 11-10-2018 XFC3_00690 243894afd62ef5ef27f6aa50ebcbe6ee 471 Gene3D G3DSA:3.10.450.350 196 437 4.0E-86 T 11-10-2018 XFC3_11840 46526996b00e083750a21f62e20ecdeb 203 SUPERFAMILY SSF54719 88 202 3.4E-43 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_11840 46526996b00e083750a21f62e20ecdeb 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 1.8E-37 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_11840 46526996b00e083750a21f62e20ecdeb 203 Gene3D G3DSA:2.40.500.20 90 203 8.6E-44 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_11840 46526996b00e083750a21f62e20ecdeb 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_11840 46526996b00e083750a21f62e20ecdeb 203 Gene3D G3DSA:1.10.287.990 20 89 6.7E-30 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_11840 46526996b00e083750a21f62e20ecdeb 203 PIRSF PIRSF000349 1 203 8.8E-78 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_11840 46526996b00e083750a21f62e20ecdeb 203 SUPERFAMILY SSF46609 1 89 1.44E-35 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_11840 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.3E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_11840 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 3.3E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_11840 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 3.3E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_11840 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.3E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_11840 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 3.3E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_11840 46526996b00e083750a21f62e20ecdeb 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 2.9E-32 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_00960 28007a32e809f27471a0942751b7d830 421 SUPERFAMILY SSF81301 7 159 8.07E-39 T 11-10-2018 XFC3_00960 28007a32e809f27471a0942751b7d830 421 Gene3D G3DSA:1.10.3090.10 160 406 2.3E-77 T 11-10-2018 XFC3_00960 28007a32e809f27471a0942751b7d830 421 Gene3D G3DSA:3.30.460.10 2 158 2.1E-57 T 11-10-2018 XFC3_00960 28007a32e809f27471a0942751b7d830 421 SUPERFAMILY SSF81891 161 371 3.27E-43 T 11-10-2018 XFC3_00960 28007a32e809f27471a0942751b7d830 421 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 4 394 8.5E-144 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 XFC3_00960 28007a32e809f27471a0942751b7d830 421 Pfam PF12626 Polymerase A arginine-rich C-terminus 305 407 2.6E-27 T 11-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain XFC3_00960 28007a32e809f27471a0942751b7d830 421 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 3 419 35.913 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 XFC3_00960 28007a32e809f27471a0942751b7d830 421 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 189 251 2.4E-21 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XFC3_00960 28007a32e809f27471a0942751b7d830 421 Pfam PF01743 Poly A polymerase head domain 35 162 1.1E-35 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XFC3_02360 c2da5bacf498d0f3a9f9f04fb94dfcad 413 Gene3D G3DSA:1.10.443.10 221 394 2.7E-19 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFC3_02360 c2da5bacf498d0f3a9f9f04fb94dfcad 413 Pfam PF13356 Arm DNA-binding domain 4 91 6.3E-15 T 11-10-2018 IPR025166 Integrase, DNA-binding domain XFC3_02360 c2da5bacf498d0f3a9f9f04fb94dfcad 413 Gene3D G3DSA:3.30.160.390 3 92 1.7E-7 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily XFC3_02360 c2da5bacf498d0f3a9f9f04fb94dfcad 413 Pfam PF00589 Phage integrase family 245 348 1.3E-9 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFC3_02360 c2da5bacf498d0f3a9f9f04fb94dfcad 413 Gene3D G3DSA:1.10.150.130 93 206 2.9E-10 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFC3_02360 c2da5bacf498d0f3a9f9f04fb94dfcad 413 SUPERFAMILY SSF56349 97 386 4.0E-40 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFC3_03150 a5e213058d3e92907cb5e21a6f37f269 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 507 1.9E-21 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal XFC3_03150 a5e213058d3e92907cb5e21a6f37f269 557 Gene3D G3DSA:3.40.50.300 323 553 2.7E-43 T 11-10-2018 XFC3_03150 a5e213058d3e92907cb5e21a6f37f269 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 2.7E-148 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 XFC3_03150 a5e213058d3e92907cb5e21a6f37f269 557 SUPERFAMILY SSF52540 1 507 7.02E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_03150 a5e213058d3e92907cb5e21a6f37f269 557 Gene3D G3DSA:3.40.50.300 1 265 3.0E-46 T 11-10-2018 XFC3_03150 a5e213058d3e92907cb5e21a6f37f269 557 PIRSF PIRSF003128 1 557 6.9E-149 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 XFC3_11780 d79b43173a84ddfdd14055c759b82c38 172 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 158 5.2E-33 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 XFC3_11780 d79b43173a84ddfdd14055c759b82c38 172 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 6 74 1.4E-4 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 XFC3_11780 d79b43173a84ddfdd14055c759b82c38 172 SUPERFAMILY SSF53155 4 82 2.16E-16 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 XFC3_11780 d79b43173a84ddfdd14055c759b82c38 172 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 8 159 44.065 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 XFC3_11780 d79b43173a84ddfdd14055c759b82c38 172 Gene3D G3DSA:3.30.160.70 4 74 2.0E-14 T 11-10-2018 XFC3_11780 d79b43173a84ddfdd14055c759b82c38 172 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 129 135 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 XFC3_11780 d79b43173a84ddfdd14055c759b82c38 172 SUPERFAMILY SSF46767 78 160 3.92E-30 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 XFC3_11780 d79b43173a84ddfdd14055c759b82c38 172 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 160 2.3E-30 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 XFC3_11780 d79b43173a84ddfdd14055c759b82c38 172 Gene3D G3DSA:1.10.10.10 77 160 2.6E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_01115 981f50134128565cc140e7199d8069d1 467 SUPERFAMILY SSF51182 183 466 3.34E-88 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily XFC3_01115 981f50134128565cc140e7199d8069d1 467 Pfam PF01050 Mannose-6-phosphate isomerase 312 462 1.0E-73 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 XFC3_01115 981f50134128565cc140e7199d8069d1 467 Gene3D G3DSA:3.90.550.10 3 345 4.3E-118 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_01115 981f50134128565cc140e7199d8069d1 467 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 466 2.6E-230 T 11-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 XFC3_01115 981f50134128565cc140e7199d8069d1 467 Gene3D G3DSA:2.60.120.10 346 451 1.0E-18 T 11-10-2018 IPR014710 RmlC-like jelly roll fold XFC3_01115 981f50134128565cc140e7199d8069d1 467 Pfam PF00483 Nucleotidyl transferase 6 284 4.0E-73 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XFC3_01115 981f50134128565cc140e7199d8069d1 467 SUPERFAMILY SSF53448 5 280 2.69E-72 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 SUPERFAMILY SSF160113 355 404 9.55E-9 T 11-10-2018 IPR036913 YegP-like superfamily XFC3_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 5.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XFC3_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 5.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XFC3_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 5.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XFC3_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 5.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XFC3_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 333 35.196 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 XFC3_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 SUPERFAMILY SSF52374 3 332 3.03E-75 T 11-10-2018 XFC3_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 Pfam PF00579 tRNA synthetases class I (W and Y) 3 279 1.4E-52 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 332 2.3E-81 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XFC3_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 Gene3D G3DSA:1.10.240.10 197 299 2.3E-106 T 11-10-2018 XFC3_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 Gene3D G3DSA:3.40.50.620 4 332 2.3E-106 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_10780 57267c913020051b404158bae3c131c6 792 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 7 750 19.112 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 XFC3_10780 57267c913020051b404158bae3c131c6 792 Pfam PF04453 Organic solvent tolerance protein 296 689 3.4E-93 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 XFC3_10210 41787fa2d99d9b4a37467f81f5c643b6 186 Pfam PF13740 ACT domain 14 87 1.7E-15 T 11-10-2018 XFC3_10210 41787fa2d99d9b4a37467f81f5c643b6 186 PIRSF PIRSF028103 11 186 3.8E-73 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 XFC3_10210 41787fa2d99d9b4a37467f81f5c643b6 186 Gene3D G3DSA:3.30.70.260 96 182 1.2E-15 T 11-10-2018 XFC3_10210 41787fa2d99d9b4a37467f81f5c643b6 186 SUPERFAMILY SSF55021 11 92 1.87E-8 T 11-10-2018 XFC3_10210 41787fa2d99d9b4a37467f81f5c643b6 186 Gene3D G3DSA:3.30.70.260 28 94 3.5E-8 T 11-10-2018 XFC3_10210 41787fa2d99d9b4a37467f81f5c643b6 186 SUPERFAMILY SSF55021 97 185 4.93E-18 T 11-10-2018 XFC3_11975 1f849b7e633c16e021c9876756fde82c 208 Gene3D G3DSA:2.170.120.20 99 195 4.6E-26 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal XFC3_11975 1f849b7e633c16e021c9876756fde82c 208 Pfam PF01386 Ribosomal L25p family 6 94 6.4E-27 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 XFC3_11975 1f849b7e633c16e021c9876756fde82c 208 Gene3D G3DSA:2.40.240.10 2 97 3.4E-32 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFC3_11975 1f849b7e633c16e021c9876756fde82c 208 SUPERFAMILY SSF50715 4 195 2.62E-54 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFC3_11975 1f849b7e633c16e021c9876756fde82c 208 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 178 4.2E-38 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 XFC3_11975 1f849b7e633c16e021c9876756fde82c 208 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 188 30.133 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 XFC3_11975 1f849b7e633c16e021c9876756fde82c 208 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 4 97 23.18 T 11-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 XFC3_11975 1f849b7e633c16e021c9876756fde82c 208 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 186 3.8E-25 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain XFC3_11975 1f849b7e633c16e021c9876756fde82c 208 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 97 9.0E-50 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 XFC3_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 Gene3D G3DSA:3.40.50.10490 90 267 2.3E-159 T 11-10-2018 XFC3_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 132 151 5.1E-45 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 237 255 5.1E-45 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 422 440 5.1E-45 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 440 454 5.1E-45 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 314 335 5.1E-45 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 454 467 5.1E-45 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 Pfam PF00342 Phosphoglucose isomerase 45 495 9.2E-140 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 Gene3D G3DSA:3.40.50.10490 6 463 2.3E-159 T 11-10-2018 XFC3_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 241 254 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 SUPERFAMILY SSF53697 5 486 2.14E-148 T 11-10-2018 XFC3_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 Gene3D G3DSA:1.10.1390.10 464 502 2.9E-11 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 38 481 36.509 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 454 471 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_12580 2f716d1a4b61a348f6203c35b44409fd 451 Gene3D G3DSA:3.30.1360.120 1 125 5.2E-40 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 XFC3_12580 2f716d1a4b61a348f6203c35b44409fd 451 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 451 4.7E-96 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 XFC3_12580 2f716d1a4b61a348f6203c35b44409fd 451 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 451 31.183 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 XFC3_12580 2f716d1a4b61a348f6203c35b44409fd 451 Gene3D G3DSA:3.40.50.300 221 380 2.6E-94 T 11-10-2018 XFC3_12580 2f716d1a4b61a348f6203c35b44409fd 451 SUPERFAMILY SSF116878 125 451 2.48E-43 T 11-10-2018 XFC3_12580 2f716d1a4b61a348f6203c35b44409fd 451 Pfam PF12631 MnmE helical domain 127 448 2.4E-51 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 XFC3_12580 2f716d1a4b61a348f6203c35b44409fd 451 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 124 4.4E-36 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 XFC3_12580 2f716d1a4b61a348f6203c35b44409fd 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 290 308 3.4E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_12580 2f716d1a4b61a348f6203c35b44409fd 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 223 243 3.4E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_12580 2f716d1a4b61a348f6203c35b44409fd 451 Gene3D G3DSA:1.20.120.430 126 451 2.6E-94 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 XFC3_12580 2f716d1a4b61a348f6203c35b44409fd 451 Pfam PF01926 50S ribosome-binding GTPase 224 312 1.2E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_12580 2f716d1a4b61a348f6203c35b44409fd 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 224 349 4.3E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFC3_12580 2f716d1a4b61a348f6203c35b44409fd 451 SUPERFAMILY SSF52540 76 367 4.94E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02800 8c30cea6e6d757e2c52defe9f5d1c17f 485 Gene3D G3DSA:3.20.20.70 1 484 6.5E-208 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_02800 8c30cea6e6d757e2c52defe9f5d1c17f 485 Pfam PF00571 CBS domain 148 202 1.0E-5 T 11-10-2018 IPR000644 CBS domain XFC3_02800 8c30cea6e6d757e2c52defe9f5d1c17f 485 Pfam PF00571 CBS domain 95 139 5.1E-11 T 11-10-2018 IPR000644 CBS domain XFC3_02800 8c30cea6e6d757e2c52defe9f5d1c17f 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 471 2.8E-156 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 XFC3_02800 8c30cea6e6d757e2c52defe9f5d1c17f 485 SMART SM00116 96 143 2.5E-11 T 11-10-2018 IPR000644 CBS domain XFC3_02800 8c30cea6e6d757e2c52defe9f5d1c17f 485 SMART SM00116 157 205 4.1E-7 T 11-10-2018 IPR000644 CBS domain XFC3_02800 8c30cea6e6d757e2c52defe9f5d1c17f 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 452 1.8E-186 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 XFC3_02800 8c30cea6e6d757e2c52defe9f5d1c17f 485 PIRSF PIRSF000130 1 485 7.0E-201 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 XFC3_02800 8c30cea6e6d757e2c52defe9f5d1c17f 485 SUPERFAMILY SSF51412 2 475 2.49E-125 T 11-10-2018 XFC3_02800 8c30cea6e6d757e2c52defe9f5d1c17f 485 SMART SM01240 7 471 0.0 T 11-10-2018 XFC3_02800 8c30cea6e6d757e2c52defe9f5d1c17f 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 XFC3_02800 8c30cea6e6d757e2c52defe9f5d1c17f 485 SUPERFAMILY SSF54631 94 202 1.89E-27 T 11-10-2018 XFC3_02800 8c30cea6e6d757e2c52defe9f5d1c17f 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 484 80.752 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 XFC3_05520 283061bfcc251307eac9ac02ad8f9dba 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 486 9.3E-49 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 XFC3_05520 283061bfcc251307eac9ac02ad8f9dba 505 Gene3D G3DSA:3.20.130.10 307 487 5.4E-60 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 XFC3_05520 283061bfcc251307eac9ac02ad8f9dba 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 2.5E-61 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 XFC3_05520 283061bfcc251307eac9ac02ad8f9dba 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 2.5E-98 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 XFC3_05520 283061bfcc251307eac9ac02ad8f9dba 505 SUPERFAMILY SSF117457 317 486 5.36E-62 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 XFC3_05520 283061bfcc251307eac9ac02ad8f9dba 505 Pfam PF05683 Fumarase C-terminus 289 488 2.0E-78 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 XFC3_05520 283061bfcc251307eac9ac02ad8f9dba 505 PIRSF PIRSF001394 1 505 5.6E-221 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 XFC3_08060 306083ff0531a9bca229a834ce422bce 308 PIRSF PIRSF037167 1 303 5.3E-122 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 XFC3_08060 306083ff0531a9bca229a834ce422bce 308 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 9 290 1.4E-113 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 XFC3_08060 306083ff0531a9bca229a834ce422bce 308 SUPERFAMILY SSF53335 12 289 2.22E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_08060 306083ff0531a9bca229a834ce422bce 308 Gene3D G3DSA:1.10.8.10 11 101 2.0E-7 T 11-10-2018 XFC3_08060 306083ff0531a9bca229a834ce422bce 308 Gene3D G3DSA:3.40.50.150 105 283 2.3E-38 T 11-10-2018 XFC3_08060 306083ff0531a9bca229a834ce422bce 308 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XFC3_08060 306083ff0531a9bca229a834ce422bce 308 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 291 1.3E-66 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 XFC3_08060 306083ff0531a9bca229a834ce422bce 308 Pfam PF05175 Methyltransferase small domain 130 213 2.4E-13 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 XFC3_08060 306083ff0531a9bca229a834ce422bce 308 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 2 296 47.997 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 XFC3_08610 8287635f6bf109cb333b336b19f64e8b 585 Pfam PF17243 POTRA domain TamA domain 1 20 100 5.3E-15 T 11-10-2018 IPR035243 TamA, POTRA domain 1 XFC3_08610 8287635f6bf109cb333b336b19f64e8b 585 Pfam PF07244 Surface antigen variable number repeat 112 172 4.0E-6 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XFC3_08610 8287635f6bf109cb333b336b19f64e8b 585 Gene3D G3DSA:3.10.20.310 18 102 6.0E-6 T 11-10-2018 XFC3_08610 8287635f6bf109cb333b336b19f64e8b 585 Gene3D G3DSA:3.10.20.310 191 267 1.1E-14 T 11-10-2018 XFC3_08610 8287635f6bf109cb333b336b19f64e8b 585 Gene3D G3DSA:2.40.160.50 268 585 1.8E-77 T 11-10-2018 XFC3_08610 8287635f6bf109cb333b336b19f64e8b 585 Gene3D G3DSA:3.10.20.310 103 190 3.5E-19 T 11-10-2018 XFC3_08610 8287635f6bf109cb333b336b19f64e8b 585 Pfam PF01103 Surface antigen 296 573 5.5E-31 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 XFC3_04880 e27d1a531952d9898f3261c0e8eb351a 183 ProSitePatterns PS00194 Thioredoxin family active site. 73 91 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XFC3_04880 e27d1a531952d9898f3261c0e8eb351a 183 SUPERFAMILY SSF52833 50 178 2.53E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_04880 e27d1a531952d9898f3261c0e8eb351a 183 Gene3D G3DSA:3.40.30.10 20 177 7.5E-31 T 11-10-2018 XFC3_04880 e27d1a531952d9898f3261c0e8eb351a 183 Pfam PF00578 AhpC/TSA family 50 161 7.7E-14 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XFC3_02645 02830e1d695ccc9b5b04339cbf9c8f7a 197 SUPERFAMILY SSF52833 50 182 2.61E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_02645 02830e1d695ccc9b5b04339cbf9c8f7a 197 Pfam PF08534 Redoxin 46 169 9.9E-15 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 XFC3_02645 02830e1d695ccc9b5b04339cbf9c8f7a 197 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 36 180 3.4E-43 T 11-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 XFC3_02645 02830e1d695ccc9b5b04339cbf9c8f7a 197 ProSitePatterns PS00194 Thioredoxin family active site. 75 93 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XFC3_02645 02830e1d695ccc9b5b04339cbf9c8f7a 197 Gene3D G3DSA:3.40.30.10 32 189 7.4E-36 T 11-10-2018 XFC3_10305 f8d52906975a73a34bfa3acecf8e9d31 327 Pfam PF01479 S4 domain 21 67 1.7E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_10305 f8d52906975a73a34bfa3acecf8e9d31 327 Gene3D G3DSA:3.10.290.10 8 73 9.3E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XFC3_10305 f8d52906975a73a34bfa3acecf8e9d31 327 SUPERFAMILY SSF55120 79 316 5.76E-76 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_10305 f8d52906975a73a34bfa3acecf8e9d31 327 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_10305 f8d52906975a73a34bfa3acecf8e9d31 327 SMART SM00363 21 85 0.0014 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_10305 f8d52906975a73a34bfa3acecf8e9d31 327 Pfam PF00849 RNA pseudouridylate synthase 94 244 6.3E-33 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_10305 f8d52906975a73a34bfa3acecf8e9d31 327 Gene3D G3DSA:3.30.2350.10 87 318 1.7E-70 T 11-10-2018 XFC3_10305 f8d52906975a73a34bfa3acecf8e9d31 327 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 315 3.7E-90 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_10305 f8d52906975a73a34bfa3acecf8e9d31 327 SUPERFAMILY SSF55174 20 107 1.63E-8 T 11-10-2018 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:3.30.420.40 181 367 3.3E-164 T 11-10-2018 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:3.30.420.40 5 380 3.3E-164 T 11-10-2018 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 SUPERFAMILY SSF100920 385 541 1.44E-57 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:2.60.34.10 384 524 2.8E-61 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 Pfam PF00012 Hsp70 protein 4 600 1.1E-257 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:3.90.640.10 230 317 3.3E-164 T 11-10-2018 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 SUPERFAMILY SSF53067 188 383 9.26E-67 T 11-10-2018 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 SUPERFAMILY SSF53067 1 184 1.62E-64 T 11-10-2018 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 36.056 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 9.8E-283 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:1.20.1270.10 525 603 4.2E-21 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 366 386 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 199 209 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 139 159 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 335 351 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 389 408 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFC3_03165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 470 486 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFC3_03100 0fc9b85d04c16a5dd472e99e7f068619 335 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 332 44.481 T 11-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 XFC3_03100 0fc9b85d04c16a5dd472e99e7f068619 335 SUPERFAMILY SSF51445 1 290 4.32E-79 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFC3_03100 0fc9b85d04c16a5dd472e99e7f068619 335 Gene3D G3DSA:3.20.20.300 1 327 1.2E-105 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 XFC3_03100 0fc9b85d04c16a5dd472e99e7f068619 335 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 233 250 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 XFC3_03100 0fc9b85d04c16a5dd472e99e7f068619 335 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 3 287 1.1E-75 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFC3_09970 588ff745cb94c79242e40eca733a4f32 99 Gene3D G3DSA:1.10.260.40 2 97 1.8E-32 T 11-10-2018 XFC3_09970 588ff745cb94c79242e40eca733a4f32 99 SMART SM00530 15 71 3.8E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_09970 588ff745cb94c79242e40eca733a4f32 99 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 7 85 1.2E-31 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 XFC3_09970 588ff745cb94c79242e40eca733a4f32 99 Pfam PF01381 Helix-turn-helix 21 69 7.2E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_09970 588ff745cb94c79242e40eca733a4f32 99 SUPERFAMILY SSF47413 11 95 7.6E-26 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_07480 588ff745cb94c79242e40eca733a4f32 99 Gene3D G3DSA:1.10.260.40 2 97 1.8E-32 T 11-10-2018 XFC3_07480 588ff745cb94c79242e40eca733a4f32 99 SMART SM00530 15 71 3.8E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_07480 588ff745cb94c79242e40eca733a4f32 99 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 7 85 1.2E-31 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 XFC3_07480 588ff745cb94c79242e40eca733a4f32 99 Pfam PF01381 Helix-turn-helix 21 69 7.2E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_07480 588ff745cb94c79242e40eca733a4f32 99 SUPERFAMILY SSF47413 11 95 7.6E-26 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_10580 86c04328aec071f23b5301bdd747eedb 860 Gene3D G3DSA:3.40.50.2000 12 395 9.1E-55 T 11-10-2018 XFC3_10580 86c04328aec071f23b5301bdd747eedb 860 Gene3D G3DSA:3.40.50.2000 655 823 2.8E-22 T 11-10-2018 XFC3_10580 86c04328aec071f23b5301bdd747eedb 860 Gene3D G3DSA:3.40.50.2000 200 383 9.1E-55 T 11-10-2018 XFC3_10580 86c04328aec071f23b5301bdd747eedb 860 Pfam PF00534 Glycosyl transferases group 1 676 819 3.1E-17 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 XFC3_10580 86c04328aec071f23b5301bdd747eedb 860 Pfam PF00534 Glycosyl transferases group 1 224 379 2.9E-28 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 XFC3_10580 86c04328aec071f23b5301bdd747eedb 860 SUPERFAMILY SSF53756 16 401 2.51E-64 T 11-10-2018 XFC3_10580 86c04328aec071f23b5301bdd747eedb 860 SUPERFAMILY SSF53756 538 842 1.15E-34 T 11-10-2018 XFC3_10580 86c04328aec071f23b5301bdd747eedb 860 Pfam PF13439 Glycosyltransferase Family 4 18 202 1.2E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 SUPERFAMILY SSF50249 69 128 1.76E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 SMART SM01185 69 123 4.3E-21 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 SUPERFAMILY SSF50249 130 187 2.57E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 SMART SM00841 131 186 6.7E-34 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 PIRSF PIRSF005901 2 188 7.2E-63 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 2.9E-21 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 Gene3D G3DSA:2.40.50.140 66 127 3.9E-29 T 11-10-2018 XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 Gene3D G3DSA:2.30.30.30 1 65 3.1E-19 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 62 5.1E-19 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 SUPERFAMILY SSF50104 5 64 2.11E-15 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 47.709 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 Gene3D G3DSA:2.40.50.140 130 188 2.3E-28 T 11-10-2018 XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 3.3E-26 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XFC3_02595 9366f662a6470e7066c8abc51182f3da 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 4.2E-73 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 XFC3_05255 c5d4a74dbcee7ede203b306bb82b4b42 194 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 193 8.3E-49 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 XFC3_05255 c5d4a74dbcee7ede203b306bb82b4b42 194 SUPERFAMILY SSF50249 1 63 1.43E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_05255 c5d4a74dbcee7ede203b306bb82b4b42 194 Gene3D G3DSA:1.10.8.10 147 193 6.8E-9 T 11-10-2018 XFC3_05255 c5d4a74dbcee7ede203b306bb82b4b42 194 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 193 30.781 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 XFC3_05255 c5d4a74dbcee7ede203b306bb82b4b42 194 SUPERFAMILY SSF46929 148 191 2.22E-7 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily XFC3_05255 c5d4a74dbcee7ede203b306bb82b4b42 194 Gene3D G3DSA:1.10.150.20 67 141 1.7E-24 T 11-10-2018 XFC3_05255 c5d4a74dbcee7ede203b306bb82b4b42 194 Pfam PF07499 RuvA, C-terminal domain 150 191 4.3E-7 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 XFC3_05255 c5d4a74dbcee7ede203b306bb82b4b42 194 SUPERFAMILY SSF47781 67 136 2.0E-20 T 11-10-2018 IPR010994 RuvA domain 2-like XFC3_05255 c5d4a74dbcee7ede203b306bb82b4b42 194 Pfam PF01330 RuvA N terminal domain 1 62 4.4E-18 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 XFC3_05255 c5d4a74dbcee7ede203b306bb82b4b42 194 Pfam PF14520 Helix-hairpin-helix domain 72 130 5.8E-17 T 11-10-2018 XFC3_05255 c5d4a74dbcee7ede203b306bb82b4b42 194 SMART SM00278 73 92 19.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XFC3_05255 c5d4a74dbcee7ede203b306bb82b4b42 194 SMART SM00278 108 127 0.31 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XFC3_05255 c5d4a74dbcee7ede203b306bb82b4b42 194 Gene3D G3DSA:2.40.50.140 1 66 6.9E-23 T 11-10-2018 XFC3_12345 d4c0bca70a3e9c70cc8e4e51910e11c7 1044 Gene3D G3DSA:3.40.50.300 266 464 3.1E-48 T 11-10-2018 XFC3_12345 d4c0bca70a3e9c70cc8e4e51910e11c7 1044 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 211 2.1E-45 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 XFC3_12345 d4c0bca70a3e9c70cc8e4e51910e11c7 1044 SUPERFAMILY SSF52540 397 683 8.58E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_12345 d4c0bca70a3e9c70cc8e4e51910e11c7 1044 Pfam PF11867 Domain of unknown function (DUF3387) 698 1037 1.1E-120 T 11-10-2018 IPR021810 Protein of unknown function DUF3387 XFC3_12345 d4c0bca70a3e9c70cc8e4e51910e11c7 1044 Gene3D G3DSA:3.90.1570.50 97 260 4.3E-29 T 11-10-2018 XFC3_12345 d4c0bca70a3e9c70cc8e4e51910e11c7 1044 SMART SM00487 268 479 8.9E-11 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_12345 d4c0bca70a3e9c70cc8e4e51910e11c7 1044 Pfam PF04851 Type III restriction enzyme, res subunit 270 446 4.1E-16 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XFC3_12345 d4c0bca70a3e9c70cc8e4e51910e11c7 1044 Gene3D G3DSA:3.40.50.300 465 710 7.5E-43 T 11-10-2018 XFC3_12345 d4c0bca70a3e9c70cc8e4e51910e11c7 1044 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 7 700 3.3E-182 T 11-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 XFC3_12345 d4c0bca70a3e9c70cc8e4e51910e11c7 1044 SUPERFAMILY SSF52540 225 489 7.69E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFC3_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 Gene3D G3DSA:3.30.300.10 11 272 2.3E-167 T 11-10-2018 XFC3_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 101 1.9E-41 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFC3_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFC3_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 SUPERFAMILY SSF55973 235 400 2.47E-65 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFC3_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 SUPERFAMILY SSF55973 110 234 5.49E-46 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFC3_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 400 55.602 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFC3_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 367 5.4E-178 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFC3_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 PIRSF PIRSF000497 1 401 1.2E-166 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFC3_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 Gene3D G3DSA:3.30.300.10 102 391 2.3E-167 T 11-10-2018 XFC3_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 366 7.2E-66 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFC3_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 Gene3D G3DSA:3.30.300.10 5 235 2.3E-167 T 11-10-2018 XFC3_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 233 1.1E-41 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFC3_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 SUPERFAMILY SSF55973 3 109 7.46E-46 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFC3_08930 d90a9b70ecb39375d2d7370c08e44d2c 111 Pfam PF00237 Ribosomal protein L22p/L17e 6 107 8.2E-32 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 XFC3_08930 d90a9b70ecb39375d2d7370c08e44d2c 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 26.243 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08930 d90a9b70ecb39375d2d7370c08e44d2c 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.5E-39 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08930 d90a9b70ecb39375d2d7370c08e44d2c 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08930 d90a9b70ecb39375d2d7370c08e44d2c 111 SUPERFAMILY SSF54843 1 108 1.05E-38 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 XFC3_08930 d90a9b70ecb39375d2d7370c08e44d2c 111 Gene3D G3DSA:3.90.470.10 1 111 6.1E-41 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 XFC3_10470 e4b8926ce3032c5b529a807a44d4171d 293 Pfam PF03471 Transporter associated domain 210 284 1.5E-22 T 11-10-2018 IPR005170 Transporter-associated domain XFC3_10470 e4b8926ce3032c5b529a807a44d4171d 293 SUPERFAMILY SSF56176 206 291 2.64E-25 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XFC3_10470 e4b8926ce3032c5b529a807a44d4171d 293 SMART SM01091 208 286 4.1E-29 T 11-10-2018 IPR005170 Transporter-associated domain XFC3_10470 e4b8926ce3032c5b529a807a44d4171d 293 Gene3D G3DSA:3.90.1280.20 139 196 4.9E-29 T 11-10-2018 XFC3_10470 e4b8926ce3032c5b529a807a44d4171d 293 Gene3D G3DSA:3.30.465.10 197 285 5.2E-28 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XFC3_10470 e4b8926ce3032c5b529a807a44d4171d 293 SUPERFAMILY SSF54631 67 204 2.2E-30 T 11-10-2018 XFC3_10470 e4b8926ce3032c5b529a807a44d4171d 293 Pfam PF00571 CBS domain 70 125 6.7E-7 T 11-10-2018 IPR000644 CBS domain XFC3_10470 e4b8926ce3032c5b529a807a44d4171d 293 Pfam PF00571 CBS domain 141 190 3.1E-5 T 11-10-2018 IPR000644 CBS domain XFC3_10470 e4b8926ce3032c5b529a807a44d4171d 293 Gene3D G3DSA:3.90.1280.20 79 138 1.2E-20 T 11-10-2018 XFC3_10470 e4b8926ce3032c5b529a807a44d4171d 293 SMART SM00116 79 128 0.17 T 11-10-2018 IPR000644 CBS domain XFC3_10470 e4b8926ce3032c5b529a807a44d4171d 293 SMART SM00116 142 190 6.4 T 11-10-2018 IPR000644 CBS domain XFC3_02320 e1bb4ad2d0486eb0fd78718c2f5650c4 758 ProSitePatterns PS00194 Thioredoxin family active site. 666 684 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XFC3_02320 e1bb4ad2d0486eb0fd78718c2f5650c4 758 Pfam PF13899 Thioredoxin-like 656 733 2.9E-13 T 11-10-2018 XFC3_02320 e1bb4ad2d0486eb0fd78718c2f5650c4 758 SUPERFAMILY SSF74863 184 301 1.83E-29 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XFC3_02320 e1bb4ad2d0486eb0fd78718c2f5650c4 758 Pfam PF11412 Disulphide bond corrector protein DsbC 184 300 8.0E-28 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain XFC3_02320 e1bb4ad2d0486eb0fd78718c2f5650c4 758 Pfam PF11412 Disulphide bond corrector protein DsbC 26 143 4.2E-29 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain XFC3_02320 e1bb4ad2d0486eb0fd78718c2f5650c4 758 SUPERFAMILY SSF74863 24 143 1.57E-30 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XFC3_02320 e1bb4ad2d0486eb0fd78718c2f5650c4 758 Gene3D G3DSA:3.40.30.10 648 753 2.3E-10 T 11-10-2018 XFC3_02320 e1bb4ad2d0486eb0fd78718c2f5650c4 758 SUPERFAMILY SSF52833 654 753 1.85E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_02320 e1bb4ad2d0486eb0fd78718c2f5650c4 758 Gene3D G3DSA:2.60.40.1250 20 155 8.1E-35 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XFC3_02320 e1bb4ad2d0486eb0fd78718c2f5650c4 758 Gene3D G3DSA:2.60.40.1250 179 318 5.2E-33 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XFC3_02885 f9b9663695d07337e1ecb41d9efb5419 777 SUPERFAMILY SSF52540 26 619 1.29E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02885 f9b9663695d07337e1ecb41d9efb5419 777 Pfam PF13166 AAA domain 202 695 1.5E-33 T 11-10-2018 IPR026866 Protein CR006, P-loop domain XFC3_02885 f9b9663695d07337e1ecb41d9efb5419 777 Pfam PF13166 AAA domain 24 169 1.4E-11 T 11-10-2018 IPR026866 Protein CR006, P-loop domain XFC3_02885 f9b9663695d07337e1ecb41d9efb5419 777 Gene3D G3DSA:3.40.50.300 14 258 2.1E-5 T 11-10-2018 XFC3_02885 f9b9663695d07337e1ecb41d9efb5419 777 Gene3D G3DSA:3.40.50.300 356 628 1.4E-13 T 11-10-2018 XFC3_02150 eb74f9b2ed9dd8af063fb85acff03d51 700 Pfam PF01431 Peptidase family M13 496 697 1.9E-69 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XFC3_02150 eb74f9b2ed9dd8af063fb85acff03d51 700 Gene3D G3DSA:3.40.390.10 62 700 3.7E-224 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 XFC3_02150 eb74f9b2ed9dd8af063fb85acff03d51 700 SUPERFAMILY SSF55486 55 700 3.66E-204 T 11-10-2018 XFC3_02150 eb74f9b2ed9dd8af063fb85acff03d51 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 527 543 8.8E-22 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XFC3_02150 eb74f9b2ed9dd8af063fb85acff03d51 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 488 500 8.8E-22 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XFC3_02150 eb74f9b2ed9dd8af063fb85acff03d51 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 506 518 8.8E-22 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XFC3_02150 eb74f9b2ed9dd8af063fb85acff03d51 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 598 609 8.8E-22 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XFC3_02150 eb74f9b2ed9dd8af063fb85acff03d51 700 Pfam PF05649 Peptidase family M13 67 444 1.0E-93 T 11-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 XFC3_02150 eb74f9b2ed9dd8af063fb85acff03d51 700 Gene3D G3DSA:1.10.1380.10 93 483 3.7E-224 T 11-10-2018 XFC3_06545 48ccd038e81bb5d1114d790618f96826 261 Gene3D G3DSA:3.20.20.10 11 260 2.1E-82 T 11-10-2018 IPR029066 PLP-binding barrel XFC3_06545 48ccd038e81bb5d1114d790618f96826 261 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 26 249 27.916 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 XFC3_06545 48ccd038e81bb5d1114d790618f96826 261 Pfam PF01168 Alanine racemase, N-terminal domain 39 250 3.1E-22 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_06545 48ccd038e81bb5d1114d790618f96826 261 PIRSF PIRSF004848 16 255 6.6E-68 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 XFC3_06545 48ccd038e81bb5d1114d790618f96826 261 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 23 250 1.4E-57 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 XFC3_06545 48ccd038e81bb5d1114d790618f96826 261 SUPERFAMILY SSF51419 18 248 4.84E-72 T 11-10-2018 IPR029066 PLP-binding barrel XFC3_07775 8594b89aa56bbb86a53914e02f5bf75f 215 SUPERFAMILY SSF52833 28 198 3.94E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_07775 8594b89aa56bbb86a53914e02f5bf75f 215 Gene3D G3DSA:3.40.30.10 23 215 6.0E-50 T 11-10-2018 XFC3_07775 8594b89aa56bbb86a53914e02f5bf75f 215 ProSitePatterns PS00194 Thioredoxin family active site. 51 69 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XFC3_07775 8594b89aa56bbb86a53914e02f5bf75f 215 PIRSF PIRSF001488 6 212 2.6E-28 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL XFC3_07775 8594b89aa56bbb86a53914e02f5bf75f 215 Pfam PF13462 Thioredoxin 48 197 8.7E-8 T 11-10-2018 IPR012336 Thioredoxin-like fold XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 13 314 2.5E-82 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 12 316 38.145 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 SUPERFAMILY SSF53671 11 315 2.62E-87 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 Gene3D G3DSA:3.40.50.1370 145 301 1.3E-83 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 166 312 1.0E-23 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 Gene3D G3DSA:3.40.50.1370 13 312 1.3E-83 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 156 9.2E-35 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 49 71 3.5E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 144 161 3.5E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 295 309 3.5E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 271 276 3.5E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 230 239 3.5E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 87 96 3.5E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 145 156 2.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 2.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 279 302 2.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFC3_03640 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 2.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFC3_05160 793e41d64db04ad8ee90cf7e1a5c96d8 512 Gene3D G3DSA:3.90.700.10 237 344 1.3E-127 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_05160 793e41d64db04ad8ee90cf7e1a5c96d8 512 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 13 480 7.6E-137 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 XFC3_05160 793e41d64db04ad8ee90cf7e1a5c96d8 512 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 341 363 6.2E-6 T 11-10-2018 XFC3_05160 793e41d64db04ad8ee90cf7e1a5c96d8 512 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 6.2E-6 T 11-10-2018 XFC3_05160 793e41d64db04ad8ee90cf7e1a5c96d8 512 Pfam PF02910 Fumarate reductase flavoprotein C-term 455 493 3.2E-6 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_05160 793e41d64db04ad8ee90cf7e1a5c96d8 512 Gene3D G3DSA:3.50.50.60 13 390 1.3E-127 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_05160 793e41d64db04ad8ee90cf7e1a5c96d8 512 Gene3D G3DSA:1.20.58.100 405 497 2.9E-12 T 11-10-2018 XFC3_05160 793e41d64db04ad8ee90cf7e1a5c96d8 512 Pfam PF00890 FAD binding domain 13 378 1.7E-77 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_05160 793e41d64db04ad8ee90cf7e1a5c96d8 512 SUPERFAMILY SSF56425 227 338 4.19E-35 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_05160 793e41d64db04ad8ee90cf7e1a5c96d8 512 SUPERFAMILY SSF51905 13 405 3.62E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_05160 793e41d64db04ad8ee90cf7e1a5c96d8 512 SUPERFAMILY SSF46977 416 493 1.31E-13 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_00040 a513cd2b2680144a33f675fb451f1638 397 Gene3D G3DSA:1.25.40.10 108 222 2.9E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_00040 a513cd2b2680144a33f675fb451f1638 397 SUPERFAMILY SSF48452 320 382 2.72E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_00040 a513cd2b2680144a33f675fb451f1638 397 SUPERFAMILY SSF48452 113 274 3.03E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_00040 a513cd2b2680144a33f675fb451f1638 397 Pfam PF13181 Tetratricopeptide repeat 183 208 0.19 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_00040 a513cd2b2680144a33f675fb451f1638 397 Pfam PF13181 Tetratricopeptide repeat 354 381 0.056 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_00040 a513cd2b2680144a33f675fb451f1638 397 Gene3D G3DSA:1.25.40.10 314 396 2.4E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_00040 a513cd2b2680144a33f675fb451f1638 397 Pfam PF13432 Tetratricopeptide repeat 113 173 4.1E-4 T 11-10-2018 XFC3_00040 a513cd2b2680144a33f675fb451f1638 397 SMART SM00028 320 352 160.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_00040 a513cd2b2680144a33f675fb451f1638 397 SMART SM00028 353 386 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_00040 a513cd2b2680144a33f675fb451f1638 397 SMART SM00028 144 177 350.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_00040 a513cd2b2680144a33f675fb451f1638 397 SMART SM00028 179 212 1.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_00040 a513cd2b2680144a33f675fb451f1638 397 Gene3D G3DSA:1.25.40.10 223 302 1.1E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_10925 7c7956c735804c71f1e6c6adf7486a59 367 SUPERFAMILY SSF53756 14 364 2.77E-108 T 11-10-2018 XFC3_10925 7c7956c735804c71f1e6c6adf7486a59 367 Gene3D G3DSA:3.40.50.2000 16 168 2.4E-107 T 11-10-2018 XFC3_10925 7c7956c735804c71f1e6c6adf7486a59 367 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 15 152 8.7E-39 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_10925 7c7956c735804c71f1e6c6adf7486a59 367 Gene3D G3DSA:3.40.50.2000 169 318 2.4E-107 T 11-10-2018 XFC3_10925 7c7956c735804c71f1e6c6adf7486a59 367 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 15 366 35.615 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_10925 7c7956c735804c71f1e6c6adf7486a59 367 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 12 362 2.1E-112 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_10925 7c7956c735804c71f1e6c6adf7486a59 367 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 192 356 9.9E-36 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 XFC3_08970 6182076c72b75ad6db53cf442b4908ea 101 SUPERFAMILY SSF81333 11 86 1.7E-17 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily XFC3_08970 6182076c72b75ad6db53cf442b4908ea 101 Hamap MF_01396 ATP synthase subunit c [atpH]. 17 82 13.656 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08970 6182076c72b75ad6db53cf442b4908ea 101 Pfam PF00137 ATP synthase subunit C 18 81 3.7E-8 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 XFC3_08970 6182076c72b75ad6db53cf442b4908ea 101 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 27 84 8.3E-23 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 XFC3_08970 6182076c72b75ad6db53cf442b4908ea 101 PRINTS PR00124 ATP synthase C subunit signature 57 82 5.1E-5 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08970 6182076c72b75ad6db53cf442b4908ea 101 PRINTS PR00124 ATP synthase C subunit signature 19 38 5.1E-5 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08970 6182076c72b75ad6db53cf442b4908ea 101 PRINTS PR00124 ATP synthase C subunit signature 40 55 5.1E-5 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08970 6182076c72b75ad6db53cf442b4908ea 101 Gene3D G3DSA:1.20.20.10 10 85 4.0E-24 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08970 6182076c72b75ad6db53cf442b4908ea 101 ProSitePatterns PS00605 ATP synthase c subunit signature. 47 68 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_07075 f73da2475097c500aac0e524755d1cee 775 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 108 756 4.2E-173 T 11-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 XFC3_07075 f73da2475097c500aac0e524755d1cee 775 Gene3D G3DSA:3.30.1370.120 105 260 6.6E-26 T 11-10-2018 IPR038591 NolW-like superfamily XFC3_07075 f73da2475097c500aac0e524755d1cee 775 Pfam PF00263 Bacterial type II and III secretion system protein 571 747 4.3E-43 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 XFC3_07075 f73da2475097c500aac0e524755d1cee 775 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 692 725 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 XFC3_07075 f73da2475097c500aac0e524755d1cee 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 567 591 1.3E-14 T 11-10-2018 IPR001775 GspD/PilQ family XFC3_07075 f73da2475097c500aac0e524755d1cee 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 711 729 1.3E-14 T 11-10-2018 IPR001775 GspD/PilQ family XFC3_07075 f73da2475097c500aac0e524755d1cee 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 484 494 1.3E-14 T 11-10-2018 IPR001775 GspD/PilQ family XFC3_07075 f73da2475097c500aac0e524755d1cee 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 734 748 1.3E-14 T 11-10-2018 IPR001775 GspD/PilQ family XFC3_07075 f73da2475097c500aac0e524755d1cee 775 Pfam PF03958 Bacterial type II/III secretion system short domain 344 484 1.8E-16 T 11-10-2018 IPR005644 NolW-like XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.1E-21 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 SMART SM00490 460 546 3.1E-20 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 Gene3D G3DSA:3.40.50.300 1 238 6.6E-70 T 11-10-2018 XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 Pfam PF02151 UvrB/uvrC motif 635 665 1.3E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 SUPERFAMILY SSF52540 36 583 8.43E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 42.296 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 SUPERFAMILY SSF46600 620 665 5.1E-12 T 11-10-2018 IPR036876 UVR domain superfamily XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 Gene3D G3DSA:3.40.50.300 269 414 2.8E-49 T 11-10-2018 XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 SMART SM00487 9 426 1.3E-25 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 Gene3D G3DSA:3.40.50.300 415 596 6.5E-50 T 11-10-2018 XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 Gene3D G3DSA:4.10.860.10 613 668 5.0E-15 T 11-10-2018 XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 Pfam PF04851 Type III restriction enzyme, res subunit 16 92 1.1E-8 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 Pfam PF00271 Helicase conserved C-terminal domain 444 544 1.6E-18 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_10190 ba902319fa13b9455684b1fab62e6a55 669 SUPERFAMILY SSF52540 4 415 5.27E-127 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_10235 74dcfc779777b482c3ba7a62733f9eb8 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 201 301 1.6E-5 T 11-10-2018 IPR010918 PurM-like, C-terminal domain XFC3_10235 74dcfc779777b482c3ba7a62733f9eb8 324 SUPERFAMILY SSF56042 141 305 2.69E-32 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFC3_10235 74dcfc779777b482c3ba7a62733f9eb8 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 135 1.1E-20 T 11-10-2018 IPR016188 PurM-like, N-terminal domain XFC3_10235 74dcfc779777b482c3ba7a62733f9eb8 324 Gene3D G3DSA:3.30.1330.10 1 141 2.4E-42 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFC3_10235 74dcfc779777b482c3ba7a62733f9eb8 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 322 2.0E-114 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 XFC3_10235 74dcfc779777b482c3ba7a62733f9eb8 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 322 26.198 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 XFC3_10235 74dcfc779777b482c3ba7a62733f9eb8 324 Gene3D G3DSA:3.90.650.10 143 323 1.6E-47 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFC3_10235 74dcfc779777b482c3ba7a62733f9eb8 324 SUPERFAMILY SSF55326 2 135 1.92E-33 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFC3_10235 74dcfc779777b482c3ba7a62733f9eb8 324 PIRSF PIRSF005303 1 322 1.2E-79 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 XFC3_10440 cb334ca3b5deba6e73151b7589be4687 210 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 9 44 1.4E-8 T 11-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 XFC3_10440 cb334ca3b5deba6e73151b7589be4687 210 SUPERFAMILY SSF50022 35 199 2.81E-37 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 XFC3_10440 cb334ca3b5deba6e73151b7589be4687 210 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 13 198 7.9E-66 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 XFC3_10440 cb334ca3b5deba6e73151b7589be4687 210 Pfam PF00355 Rieske [2Fe-2S] domain 105 182 4.7E-10 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 XFC3_10440 cb334ca3b5deba6e73151b7589be4687 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 157 169 2.4E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 XFC3_10440 cb334ca3b5deba6e73151b7589be4687 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 126 137 2.4E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 XFC3_10440 cb334ca3b5deba6e73151b7589be4687 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 170 182 2.4E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 XFC3_10440 cb334ca3b5deba6e73151b7589be4687 210 Gene3D G3DSA:2.102.10.10 47 198 5.9E-39 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 XFC3_01020 314afec4fef1203c3896ccab446db125 300 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 243 298 4.7E-12 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_01020 314afec4fef1203c3896ccab446db125 300 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 1.7E-65 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_01020 314afec4fef1203c3896ccab446db125 300 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 235 8.2E-16 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 XFC3_01020 314afec4fef1203c3896ccab446db125 300 Gene3D G3DSA:3.30.2350.10 2 237 5.3E-79 T 11-10-2018 XFC3_01020 314afec4fef1203c3896ccab446db125 300 SUPERFAMILY SSF55120 9 221 6.62E-71 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_01020 314afec4fef1203c3896ccab446db125 300 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 31 179 8.7E-48 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 XFC3_01020 314afec4fef1203c3896ccab446db125 300 SUPERFAMILY SSF88697 242 299 3.63E-8 T 11-10-2018 IPR015947 PUA-like superfamily XFC3_01020 314afec4fef1203c3896ccab446db125 300 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 9 298 17.288 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 417 431 6.9E-9 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 490 509 6.9E-9 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 553 568 6.9E-9 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Gene3D G3DSA:3.30.310.50 698 785 6.4E-15 T 11-10-2018 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Gene3D G3DSA:3.40.120.10 492 569 5.7E-18 T 11-10-2018 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 476 573 1.5E-16 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 731 775 3.4E-6 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 SUPERFAMILY SSF53738 473 575 3.1E-21 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 SUPERFAMILY SSF53738 324 459 3.3E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 SUPERFAMILY SSF55957 689 782 1.02E-13 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Gene3D G3DSA:3.40.120.10 570 688 1.2E-35 T 11-10-2018 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 578 689 6.1E-19 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 SUPERFAMILY SSF53738 579 684 1.37E-27 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 329 458 1.9E-32 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Gene3D G3DSA:3.40.120.10 319 470 3.3E-40 T 11-10-2018 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 342 3.6E-83 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 SUPERFAMILY SSF64484 16 1363 0.0 T 11-10-2018 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 SMART SM00663 235 514 5.9E-180 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.3E-18 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1380 18.722 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 1.0E-77 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:1.10.150.390 1316 1374 1.1E-27 T 11-10-2018 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:1.10.274.100 490 640 1.6E-40 T 11-10-2018 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:2.40.50.100 949 1023 4.9E-27 T 11-10-2018 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:1.10.132.30 641 790 4.5E-62 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:1.10.40.90 374 416 5.5E-22 T 11-10-2018 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:2.40.50.100 1024 1127 8.4E-27 T 11-10-2018 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 3.5E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 3.9E-27 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 5.1E-28 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:1.10.1790.20 1136 1314 1.5E-62 T 11-10-2018 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:2.40.50.100 1152 1215 1.5E-62 T 11-10-2018 XFC3_11900 8718ef1cd180408b0895833aa37423aa 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_00535 811c1e88daab113a449890d8fd2f71e2 604 ProSitePatterns PS00080 Multicopper oxidases signature 2. 585 596 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 XFC3_00535 811c1e88daab113a449890d8fd2f71e2 604 SUPERFAMILY SSF49503 454 602 3.74E-37 T 11-10-2018 IPR008972 Cupredoxin XFC3_00535 811c1e88daab113a449890d8fd2f71e2 604 Pfam PF07731 Multicopper oxidase 490 603 2.4E-26 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 XFC3_00535 811c1e88daab113a449890d8fd2f71e2 604 Pfam PF00394 Multicopper oxidase 181 357 6.3E-31 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 XFC3_00535 811c1e88daab113a449890d8fd2f71e2 604 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 9 603 0.0 T 11-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 XFC3_00535 811c1e88daab113a449890d8fd2f71e2 604 Gene3D G3DSA:2.60.40.420 175 384 1.7E-37 T 11-10-2018 IPR008972 Cupredoxin XFC3_00535 811c1e88daab113a449890d8fd2f71e2 604 SUPERFAMILY SSF49503 45 201 2.99E-42 T 11-10-2018 IPR008972 Cupredoxin XFC3_00535 811c1e88daab113a449890d8fd2f71e2 604 Gene3D G3DSA:2.60.40.420 483 603 2.7E-31 T 11-10-2018 IPR008972 Cupredoxin XFC3_00535 811c1e88daab113a449890d8fd2f71e2 604 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 39 8.9E-6 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal XFC3_00535 811c1e88daab113a449890d8fd2f71e2 604 ProSitePatterns PS00079 Multicopper oxidases signature 1. 145 165 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site XFC3_00535 811c1e88daab113a449890d8fd2f71e2 604 ProSitePatterns PS00079 Multicopper oxidases signature 1. 580 600 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site XFC3_00535 811c1e88daab113a449890d8fd2f71e2 604 SUPERFAMILY SSF49503 174 384 1.08E-53 T 11-10-2018 IPR008972 Cupredoxin XFC3_00535 811c1e88daab113a449890d8fd2f71e2 604 Gene3D G3DSA:2.60.40.420 35 169 4.2E-41 T 11-10-2018 IPR008972 Cupredoxin XFC3_00535 811c1e88daab113a449890d8fd2f71e2 604 Pfam PF07732 Multicopper oxidase 59 169 5.9E-40 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 XFC3_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 83 96 - T 11-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XFC3_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 Pfam PF17284 Spermidine synthase tetramerisation domain 7 58 1.2E-10 T 11-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XFC3_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 Gene3D G3DSA:3.40.50.150 59 285 1.5E-60 T 11-10-2018 XFC3_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 36.493 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XFC3_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 SUPERFAMILY SSF53335 7 284 3.67E-74 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 Pfam PF01564 Spermine/spermidine synthase domain 63 246 8.7E-52 T 11-10-2018 XFC3_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 Gene3D G3DSA:2.30.140.10 3 58 8.0E-19 T 11-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XFC3_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 1.3E-79 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XFC3_01905 4ce2b69fcc37391c0f95880ea59e9adb 406 Gene3D G3DSA:3.20.20.70 90 369 6.9E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_01905 4ce2b69fcc37391c0f95880ea59e9adb 406 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 27 384 72.69 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 XFC3_01905 4ce2b69fcc37391c0f95880ea59e9adb 406 Pfam PF04055 Radical SAM superfamily 134 303 4.2E-19 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XFC3_01905 4ce2b69fcc37391c0f95880ea59e9adb 406 Gene3D G3DSA:1.10.150.530 27 89 7.2E-24 T 11-10-2018 XFC3_01905 4ce2b69fcc37391c0f95880ea59e9adb 406 SUPERFAMILY SSF102114 130 368 4.58E-17 T 11-10-2018 XFC3_01905 4ce2b69fcc37391c0f95880ea59e9adb 406 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 26 388 8.9E-134 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 XFC3_01905 4ce2b69fcc37391c0f95880ea59e9adb 406 PIRSF PIRSF006004 20 397 1.7E-150 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 XFC3_05980 19246a0416ba173e66c4c65191c54b60 220 Gene3D G3DSA:3.40.50.1820 1 220 4.2E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_05980 19246a0416ba173e66c4c65191c54b60 220 SUPERFAMILY SSF53474 12 216 2.54E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_05980 19246a0416ba173e66c4c65191c54b60 220 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 65 142 2.6E-5 T 11-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 XFC3_11820 0116a24ca284c5b8283f6620ee51065b 1132 Gene3D G3DSA:2.40.50.140 31 124 1.5E-31 T 11-10-2018 XFC3_11820 0116a24ca284c5b8283f6620ee51065b 1132 Pfam PF10150 Ribonuclease E/G family 120 389 3.3E-96 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 XFC3_11820 0116a24ca284c5b8283f6620ee51065b 1132 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 1.7E-163 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 XFC3_11820 0116a24ca284c5b8283f6620ee51065b 1132 Pfam PF00575 S1 RNA binding domain 36 117 1.8E-11 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFC3_11820 0116a24ca284c5b8283f6620ee51065b 1132 SUPERFAMILY SSF50249 40 124 3.77E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_11820 0116a24ca284c5b8283f6620ee51065b 1132 Hamap MF_00970 Ribonuclease E [rne]. 1 1054 31.841 T 11-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 XFC3_11820 0116a24ca284c5b8283f6620ee51065b 1132 Gene3D G3DSA:3.40.1260.20 399 507 3.6E-35 T 11-10-2018 XFC3_11820 0116a24ca284c5b8283f6620ee51065b 1132 SMART SM00316 37 118 8.2E-9 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFC3_09540 f0911c404a26997c2033741d346a163d 438 SUPERFAMILY SSF55729 301 417 7.68E-10 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFC3_09540 f0911c404a26997c2033741d346a163d 438 Gene3D G3DSA:3.40.630.30 293 438 2.6E-57 T 11-10-2018 XFC3_09540 f0911c404a26997c2033741d346a163d 438 SUPERFAMILY SSF53633 12 290 5.59E-51 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFC3_09540 f0911c404a26997c2033741d346a163d 438 PIRSF PIRSF036441 18 438 1.1E-279 T 11-10-2018 IPR011242 Acetylglutamate kinase ArgB, GNAT domain-containing GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XFC3_09540 f0911c404a26997c2033741d346a163d 438 Pfam PF00696 Amino acid kinase family 40 252 3.4E-27 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XFC3_09540 f0911c404a26997c2033741d346a163d 438 Gene3D G3DSA:3.40.1160.10 1 292 5.5E-89 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFC3_09540 f0911c404a26997c2033741d346a163d 438 Pfam PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase 272 431 2.8E-52 T 11-10-2018 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|Reactome: R-HSA-70635 XFC3_09540 f0911c404a26997c2033741d346a163d 438 TIGRFAM TIGR00761 argB: acetylglutamate kinase 39 260 9.1E-60 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XFC3_10870 c7a53b9c3ef77447b88e633c37162fdb 282 Gene3D G3DSA:3.40.50.150 121 276 2.9E-14 T 11-10-2018 XFC3_10870 c7a53b9c3ef77447b88e633c37162fdb 282 SUPERFAMILY SSF53335 69 269 2.33E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_03355 6e54db4bdbfca7774ccdd10bbb14d802 233 Gene3D G3DSA:3.40.50.150 9 232 2.3E-43 T 11-10-2018 XFC3_03355 6e54db4bdbfca7774ccdd10bbb14d802 233 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 31 37 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XFC3_03355 6e54db4bdbfca7774ccdd10bbb14d802 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 220 233 1.3E-22 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_03355 6e54db4bdbfca7774ccdd10bbb14d802 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 179 196 1.3E-22 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_03355 6e54db4bdbfca7774ccdd10bbb14d802 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 84 104 1.3E-22 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_03355 6e54db4bdbfca7774ccdd10bbb14d802 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 197 215 1.3E-22 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_03355 6e54db4bdbfca7774ccdd10bbb14d802 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 27 41 1.3E-22 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_03355 6e54db4bdbfca7774ccdd10bbb14d802 233 Pfam PF01555 DNA methylase 28 151 2.3E-11 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XFC3_03355 6e54db4bdbfca7774ccdd10bbb14d802 233 Pfam PF01555 DNA methylase 176 229 1.6E-14 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XFC3_03355 6e54db4bdbfca7774ccdd10bbb14d802 233 SUPERFAMILY SSF53335 9 229 2.43E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_09040 2e737d6fe015bc69b51747243f45760b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.9E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_09040 2e737d6fe015bc69b51747243f45760b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.9E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_09040 2e737d6fe015bc69b51747243f45760b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.9E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_09040 2e737d6fe015bc69b51747243f45760b 301 Gene3D G3DSA:3.40.190.10 165 266 2.5E-55 T 11-10-2018 XFC3_09040 2e737d6fe015bc69b51747243f45760b 301 Pfam PF03466 LysR substrate binding domain 89 295 2.6E-41 T 11-10-2018 IPR005119 LysR, substrate-binding XFC3_09040 2e737d6fe015bc69b51747243f45760b 301 SUPERFAMILY SSF46785 7 86 8.04E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_09040 2e737d6fe015bc69b51747243f45760b 301 SUPERFAMILY SSF53850 90 298 1.09E-40 T 11-10-2018 XFC3_09040 2e737d6fe015bc69b51747243f45760b 301 Gene3D G3DSA:3.40.190.10 93 291 2.5E-55 T 11-10-2018 XFC3_09040 2e737d6fe015bc69b51747243f45760b 301 Gene3D G3DSA:1.10.10.10 4 91 3.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_09040 2e737d6fe015bc69b51747243f45760b 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 6.1E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_04180 e2cadcbf3ad9caf013b46d9f9b87e5e5 230 SMART SM00331 8 229 3.3E-15 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 XFC3_04180 e2cadcbf3ad9caf013b46d9f9b87e5e5 230 SMART SM00332 3 227 1.9E-13 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 XFC3_04180 e2cadcbf3ad9caf013b46d9f9b87e5e5 230 Gene3D G3DSA:3.60.40.10 1 230 8.4E-54 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 XFC3_04180 e2cadcbf3ad9caf013b46d9f9b87e5e5 230 SUPERFAMILY SSF81606 2 229 5.89E-52 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 XFC3_04180 e2cadcbf3ad9caf013b46d9f9b87e5e5 230 Pfam PF13672 Protein phosphatase 2C 17 192 4.1E-14 T 11-10-2018 XFC3_06075 1404b195e2d708f05e50884739515724 198 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 XFC3_06075 1404b195e2d708f05e50884739515724 198 SUPERFAMILY SSF111304 3 197 5.1E-70 T 11-10-2018 IPR023627 Recombination protein RecR XFC3_06075 1404b195e2d708f05e50884739515724 198 Gene3D G3DSA:1.10.8.420 2 51 1.6E-16 T 11-10-2018 XFC3_06075 1404b195e2d708f05e50884739515724 198 Gene3D G3DSA:3.40.1360.10 76 197 2.6E-39 T 11-10-2018 XFC3_06075 1404b195e2d708f05e50884739515724 198 SMART SM00493 79 164 8.0E-9 T 11-10-2018 IPR006171 TOPRIM domain XFC3_06075 1404b195e2d708f05e50884739515724 198 TIGRFAM TIGR00615 recR: recombination protein RecR 3 194 4.8E-69 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 XFC3_06075 1404b195e2d708f05e50884739515724 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 94.352 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 XFC3_06075 1404b195e2d708f05e50884739515724 198 Pfam PF02132 RecR protein 39 77 3.5E-12 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger XFC3_06075 1404b195e2d708f05e50884739515724 198 Pfam PF13662 Toprim domain 80 170 4.1E-21 T 11-10-2018 IPR006171 TOPRIM domain XFC3_07790 fb6cae70e8bdf43bf26cbec2e345a990 203 SUPERFAMILY SSF52540 20 197 4.31E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07790 fb6cae70e8bdf43bf26cbec2e345a990 203 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 193 1.6E-72 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 XFC3_07790 fb6cae70e8bdf43bf26cbec2e345a990 203 Pfam PF01926 50S ribosome-binding GTPase 27 145 1.6E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_07790 fb6cae70e8bdf43bf26cbec2e345a990 203 Gene3D G3DSA:3.40.50.300 4 199 1.4E-52 T 11-10-2018 XFC3_07790 fb6cae70e8bdf43bf26cbec2e345a990 203 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 197 28.011 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 XFC3_08430 aac0644d50d2fd7c8801f26e021ffa3b 503 Pfam PF00450 Serine carboxypeptidase 91 463 9.6E-21 T 11-10-2018 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 XFC3_08430 aac0644d50d2fd7c8801f26e021ffa3b 503 SUPERFAMILY SSF53474 52 480 1.45E-70 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_08430 aac0644d50d2fd7c8801f26e021ffa3b 503 ProSitePatterns PS00131 Serine carboxypeptidases, serine active site. 204 211 - T 11-10-2018 IPR018202 Serine carboxypeptidase, serine active site XFC3_11450 d74da5b55fd95e23ac1d16c1bcd10388 528 SMART SM01040 288 376 5.6E-38 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_11450 d74da5b55fd95e23ac1d16c1bcd10388 528 SMART SM01040 172 258 2.2E-39 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_11450 d74da5b55fd95e23ac1d16c1bcd10388 528 SMART SM01040 42 130 9.1E-30 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_11450 d74da5b55fd95e23ac1d16c1bcd10388 528 Pfam PF02498 BRO family, N-terminal domain 289 376 5.1E-24 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_11450 d74da5b55fd95e23ac1d16c1bcd10388 528 Pfam PF02498 BRO family, N-terminal domain 173 258 6.8E-23 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_11450 d74da5b55fd95e23ac1d16c1bcd10388 528 Pfam PF02498 BRO family, N-terminal domain 43 130 3.0E-19 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_07300 d74da5b55fd95e23ac1d16c1bcd10388 528 SMART SM01040 288 376 5.6E-38 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_07300 d74da5b55fd95e23ac1d16c1bcd10388 528 SMART SM01040 172 258 2.2E-39 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_07300 d74da5b55fd95e23ac1d16c1bcd10388 528 SMART SM01040 42 130 9.1E-30 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_07300 d74da5b55fd95e23ac1d16c1bcd10388 528 Pfam PF02498 BRO family, N-terminal domain 289 376 5.1E-24 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_07300 d74da5b55fd95e23ac1d16c1bcd10388 528 Pfam PF02498 BRO family, N-terminal domain 173 258 6.8E-23 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_07300 d74da5b55fd95e23ac1d16c1bcd10388 528 Pfam PF02498 BRO family, N-terminal domain 43 130 3.0E-19 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_02820 90f9a0a748f777c39f3afd0ee5057fdf 965 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 925 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 XFC3_02820 90f9a0a748f777c39f3afd0ee5057fdf 965 SUPERFAMILY SSF52540 5 570 5.76E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02820 90f9a0a748f777c39f3afd0ee5057fdf 965 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_02820 90f9a0a748f777c39f3afd0ee5057fdf 965 Gene3D G3DSA:1.20.1580.10 91 493 1.9E-242 T 11-10-2018 XFC3_02820 90f9a0a748f777c39f3afd0ee5057fdf 965 Gene3D G3DSA:3.40.50.300 617 936 6.1E-138 T 11-10-2018 XFC3_02820 90f9a0a748f777c39f3afd0ee5057fdf 965 Gene3D G3DSA:1.20.1580.10 692 830 6.1E-138 T 11-10-2018 XFC3_02820 90f9a0a748f777c39f3afd0ee5057fdf 965 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_02820 90f9a0a748f777c39f3afd0ee5057fdf 965 SUPERFAMILY SSF52540 622 908 3.33E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02820 90f9a0a748f777c39f3afd0ee5057fdf 965 Gene3D G3DSA:1.10.8.280 288 404 1.9E-242 T 11-10-2018 XFC3_02820 90f9a0a748f777c39f3afd0ee5057fdf 965 Gene3D G3DSA:3.40.50.300 7 596 1.9E-242 T 11-10-2018 XFC3_02820 90f9a0a748f777c39f3afd0ee5057fdf 965 Pfam PF00005 ABC transporter 624 860 1.2E-9 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_02820 90f9a0a748f777c39f3afd0ee5057fdf 965 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 940 22.439 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 XFC3_02820 90f9a0a748f777c39f3afd0ee5057fdf 965 Gene3D G3DSA:3.30.190.20 131 240 1.9E-242 T 11-10-2018 XFC3_03145 a009a8f606a115299faefd1738d78976 136 Pfam PF01475 Ferric uptake regulator family 9 129 1.2E-41 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 XFC3_03145 a009a8f606a115299faefd1738d78976 136 SUPERFAMILY SSF46785 4 131 2.25E-37 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_03145 a009a8f606a115299faefd1738d78976 136 Gene3D G3DSA:1.10.10.10 1 82 4.5E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_03145 a009a8f606a115299faefd1738d78976 136 Gene3D G3DSA:3.30.1490.190 85 136 9.2E-16 T 11-10-2018 XFC3_05220 515e2b41cceb49c58aca1423e9120998 186 Gene3D G3DSA:3.30.40.60 75 163 4.2E-22 T 11-10-2018 XFC3_05220 515e2b41cceb49c58aca1423e9120998 186 SMART SM00507 78 131 6.8E-13 T 11-10-2018 IPR003615 HNH nuclease XFC3_05220 515e2b41cceb49c58aca1423e9120998 186 Pfam PF14279 HNH endonuclease 91 145 1.9E-15 T 11-10-2018 IPR029471 HNH endonuclease 5 XFC3_10915 81b050d3149eb7fff158075ac1aa5b0e 318 Pfam PF07478 D-ala D-ala ligase C-terminus 120 315 2.2E-53 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_10915 81b050d3149eb7fff158075ac1aa5b0e 318 Gene3D G3DSA:3.30.470.20 101 314 1.8E-69 T 11-10-2018 XFC3_10915 81b050d3149eb7fff158075ac1aa5b0e 318 Gene3D G3DSA:3.40.50.20 6 100 3.1E-25 T 11-10-2018 XFC3_10915 81b050d3149eb7fff158075ac1aa5b0e 318 Gene3D G3DSA:3.30.1490.20 127 195 1.8E-69 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XFC3_10915 81b050d3149eb7fff158075ac1aa5b0e 318 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 17 318 34.199 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_10915 81b050d3149eb7fff158075ac1aa5b0e 318 PIRSF PIRSF039102 16 57 7.5E-7 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_10915 81b050d3149eb7fff158075ac1aa5b0e 318 PIRSF PIRSF039102 55 318 5.1E-79 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_10915 81b050d3149eb7fff158075ac1aa5b0e 318 SUPERFAMILY SSF56059 112 316 9.86E-48 T 11-10-2018 XFC3_10915 81b050d3149eb7fff158075ac1aa5b0e 318 Pfam PF01820 D-ala D-ala ligase N-terminus 18 102 5.6E-14 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_10915 81b050d3149eb7fff158075ac1aa5b0e 318 SUPERFAMILY SSF52440 18 112 2.21E-24 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XFC3_10915 81b050d3149eb7fff158075ac1aa5b0e 318 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 259 288 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_10915 81b050d3149eb7fff158075ac1aa5b0e 318 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 18 317 1.5E-105 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_10915 81b050d3149eb7fff158075ac1aa5b0e 318 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 79 90 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 Gene3D G3DSA:1.10.1440.20 568 623 2.0E-7 T 11-10-2018 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 Pfam PF00694 Aconitase C-terminal domain 662 793 8.5E-29 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 Gene3D G3DSA:3.30.499.10 362 566 2.2E-75 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 Gene3D G3DSA:3.30.499.20 11 359 1.3E-124 T 11-10-2018 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 SUPERFAMILY SSF53732 7 595 2.88E-180 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 SUPERFAMILY SSF52016 604 864 2.35E-65 T 11-10-2018 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 3 864 0.0 T 11-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 Gene3D G3DSA:3.20.19.10 624 865 1.8E-79 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 Pfam PF00330 Aconitase family (aconitate hydratase) 70 538 4.5E-144 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 PRINTS PR00415 Aconitase family signature 162 170 5.0E-28 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 PRINTS PR00415 Aconitase family signature 407 418 5.0E-28 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 PRINTS PR00415 Aconitase family signature 191 204 5.0E-28 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 PRINTS PR00415 Aconitase family signature 267 280 5.0E-28 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 PRINTS PR00415 Aconitase family signature 469 482 5.0E-28 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 PRINTS PR00415 Aconitase family signature 138 151 5.0E-28 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 PRINTS PR00415 Aconitase family signature 360 374 5.0E-28 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 PRINTS PR00415 Aconitase family signature 205 220 5.0E-28 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_08565 5bbbd82c739773994d66a83c876e731c 874 PRINTS PR00415 Aconitase family signature 281 294 5.0E-28 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_12155 b457be071f363237895dcf23de7c19bc 543 Pfam PF00271 Helicase conserved C-terminal domain 244 352 4.3E-27 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_12155 b457be071f363237895dcf23de7c19bc 543 Gene3D G3DSA:3.40.50.300 226 389 1.8E-43 T 11-10-2018 XFC3_12155 b457be071f363237895dcf23de7c19bc 543 SMART SM00487 28 235 3.2E-56 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_12155 b457be071f363237895dcf23de7c19bc 543 Pfam PF12300 ATP-dependent RNA helicase RhlB 377 516 1.2E-6 T 11-10-2018 IPR022077 ATP-dependent RNA helicase RhlB GO:0016817 XFC3_12155 b457be071f363237895dcf23de7c19bc 543 Gene3D G3DSA:3.40.50.300 2 222 1.1E-74 T 11-10-2018 XFC3_12155 b457be071f363237895dcf23de7c19bc 543 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XFC3_12155 b457be071f363237895dcf23de7c19bc 543 SMART SM00490 271 352 4.0E-30 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_12155 b457be071f363237895dcf23de7c19bc 543 SUPERFAMILY SSF52540 84 363 1.29E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_12155 b457be071f363237895dcf23de7c19bc 543 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 390 49.9 T 11-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 XFC3_12155 b457be071f363237895dcf23de7c19bc 543 Pfam PF00270 DEAD/DEAH box helicase 33 206 1.1E-46 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFC3_05910 4d9183f5fdddb2b5f3af03da5df36366 484 SUPERFAMILY SSF111352 76 463 1.11E-123 T 11-10-2018 XFC3_05910 4d9183f5fdddb2b5f3af03da5df36366 484 Pfam PF00909 Ammonium Transporter Family 82 482 6.3E-117 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 XFC3_05910 4d9183f5fdddb2b5f3af03da5df36366 484 TIGRFAM TIGR00836 amt: ammonium transporter 80 482 3.2E-129 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 XFC3_05910 4d9183f5fdddb2b5f3af03da5df36366 484 Gene3D G3DSA:1.10.3430.10 57 484 2.5E-136 T 11-10-2018 IPR029020 Ammonium/urea transporter XFC3_05910 4d9183f5fdddb2b5f3af03da5df36366 484 ProSitePatterns PS01219 Ammonium transporters signature. 238 263 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 XFC3_00140 0c628d59433ccb3514fed09c9e7947ce 243 SMART SM00934 13 230 1.6E-66 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_00140 0c628d59433ccb3514fed09c9e7947ce 243 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 11 235 32.688 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_00140 0c628d59433ccb3514fed09c9e7947ce 243 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 66 79 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_00140 0c628d59433ccb3514fed09c9e7947ce 243 Gene3D G3DSA:3.20.20.70 10 236 1.1E-64 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_00140 0c628d59433ccb3514fed09c9e7947ce 243 SUPERFAMILY SSF51366 11 234 1.7E-56 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XFC3_00140 0c628d59433ccb3514fed09c9e7947ce 243 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 13 229 5.7E-39 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_00140 0c628d59433ccb3514fed09c9e7947ce 243 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 14 231 8.3E-61 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_00305 d3294f9c8ecf8dd26366025eed15097d 455 Gene3D G3DSA:1.10.260.30 328 451 1.5E-40 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 XFC3_00305 d3294f9c8ecf8dd26366025eed15097d 455 SMART SM00963 1 86 1.5E-32 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFC3_00305 d3294f9c8ecf8dd26366025eed15097d 455 SMART SM00382 99 277 1.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_00305 d3294f9c8ecf8dd26366025eed15097d 455 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.0E-170 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 XFC3_00305 d3294f9c8ecf8dd26366025eed15097d 455 Gene3D G3DSA:3.40.50.300 90 285 1.4E-116 T 11-10-2018 XFC3_00305 d3294f9c8ecf8dd26366025eed15097d 455 SUPERFAMILY SSF52540 42 353 1.12E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_00305 d3294f9c8ecf8dd26366025eed15097d 455 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.9E-18 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFC3_00305 d3294f9c8ecf8dd26366025eed15097d 455 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFC3_00305 d3294f9c8ecf8dd26366025eed15097d 455 Gene3D G3DSA:1.20.120.140 5 306 1.4E-116 T 11-10-2018 XFC3_00305 d3294f9c8ecf8dd26366025eed15097d 455 SMART SM00962 100 296 1.3E-109 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFC3_00305 d3294f9c8ecf8dd26366025eed15097d 455 Pfam PF00448 SRP54-type protein, GTPase domain 100 295 2.2E-72 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFC3_00305 d3294f9c8ecf8dd26366025eed15097d 455 Pfam PF02978 Signal peptide binding domain 328 427 1.0E-32 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 XFC3_00305 d3294f9c8ecf8dd26366025eed15097d 455 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 33.433 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 XFC3_00305 d3294f9c8ecf8dd26366025eed15097d 455 SUPERFAMILY SSF47446 328 430 4.25E-37 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 XFC3_11170 ed7166dce18f2319209eea5dc6c01e0e 99 SMART SM00411 3 92 1.3E-40 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_11170 ed7166dce18f2319209eea5dc6c01e0e 99 SUPERFAMILY SSF47729 3 92 1.44E-31 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFC3_11170 ed7166dce18f2319209eea5dc6c01e0e 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 29.342 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 XFC3_11170 ed7166dce18f2319209eea5dc6c01e0e 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.1E-15 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_11170 ed7166dce18f2319209eea5dc6c01e0e 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.1E-15 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_11170 ed7166dce18f2319209eea5dc6c01e0e 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.1E-15 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_11170 ed7166dce18f2319209eea5dc6c01e0e 99 Gene3D G3DSA:4.10.520.10 1 96 2.1E-35 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFC3_11170 ed7166dce18f2319209eea5dc6c01e0e 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 XFC3_11170 ed7166dce18f2319209eea5dc6c01e0e 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.8E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_11170 ed7166dce18f2319209eea5dc6c01e0e 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 6.8E-45 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 XFC3_00780 60b54a132b3c739ce2156509557292c1 368 Gene3D G3DSA:3.30.70.1400 51 138 3.8E-84 T 11-10-2018 XFC3_00780 60b54a132b3c739ce2156509557292c1 368 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 44.759 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 XFC3_00780 60b54a132b3c739ce2156509557292c1 368 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 4.8E-132 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 XFC3_00780 60b54a132b3c739ce2156509557292c1 368 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 259 4.9E-88 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain XFC3_00780 60b54a132b3c739ce2156509557292c1 368 Gene3D G3DSA:2.40.30.110 282 367 8.3E-28 T 11-10-2018 XFC3_00780 60b54a132b3c739ce2156509557292c1 368 SUPERFAMILY SSF101790 274 362 3.11E-23 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal XFC3_00780 60b54a132b3c739ce2156509557292c1 368 Gene3D G3DSA:4.10.1250.10 237 279 8.2E-21 T 11-10-2018 XFC3_00780 60b54a132b3c739ce2156509557292c1 368 Gene3D G3DSA:3.30.1360.120 7 236 3.8E-84 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 XFC3_00780 60b54a132b3c739ce2156509557292c1 368 SUPERFAMILY SSF103025 2 282 4.49E-92 T 11-10-2018 XFC3_00780 60b54a132b3c739ce2156509557292c1 368 PIRSF PIRSF006487 1 366 2.3E-87 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 XFC3_00780 60b54a132b3c739ce2156509557292c1 368 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 267 352 1.7E-18 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 XFC3_11705 dd6b534845a04bc81c399614000375fe 292 Gene3D G3DSA:3.30.479.20 56 147 3.4E-25 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XFC3_11705 dd6b534845a04bc81c399614000375fe 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 289 3.4E-98 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFC3_11705 dd6b534845a04bc81c399614000375fe 292 SUPERFAMILY SSF46934 1 55 4.38E-19 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 XFC3_11705 dd6b534845a04bc81c399614000375fe 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 72.924 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFC3_11705 dd6b534845a04bc81c399614000375fe 292 Pfam PF00889 Elongation factor TS 70 272 2.2E-64 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 XFC3_11705 dd6b534845a04bc81c399614000375fe 292 SUPERFAMILY SSF54713 55 144 2.18E-20 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XFC3_11705 dd6b534845a04bc81c399614000375fe 292 Gene3D G3DSA:1.10.8.10 1 55 1.6E-26 T 11-10-2018 XFC3_11705 dd6b534845a04bc81c399614000375fe 292 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFC3_11705 dd6b534845a04bc81c399614000375fe 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFC3_11705 dd6b534845a04bc81c399614000375fe 292 Gene3D G3DSA:3.30.479.20 153 271 4.0E-39 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XFC3_11705 dd6b534845a04bc81c399614000375fe 292 SUPERFAMILY SSF54713 149 289 5.89E-46 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XFC3_11705 dd6b534845a04bc81c399614000375fe 292 Gene3D G3DSA:1.10.286.20 189 237 4.0E-39 T 11-10-2018 XFC3_01275 d50737961dbf4b092dd610b8ff7c8f1f 432 Gene3D G3DSA:3.90.220.20 30 410 8.5E-62 T 11-10-2018 XFC3_01275 d50737961dbf4b092dd610b8ff7c8f1f 432 Gene3D G3DSA:1.10.287.1120 155 407 8.5E-62 T 11-10-2018 XFC3_01275 d50737961dbf4b092dd610b8ff7c8f1f 432 SUPERFAMILY SSF116734 30 202 1.96E-14 T 11-10-2018 XFC3_01275 d50737961dbf4b092dd610b8ff7c8f1f 432 Gene3D G3DSA:3.90.220.20 219 363 8.5E-62 T 11-10-2018 XFC3_01275 d50737961dbf4b092dd610b8ff7c8f1f 432 SUPERFAMILY SSF116734 207 414 4.09E-48 T 11-10-2018 XFC3_01275 d50737961dbf4b092dd610b8ff7c8f1f 432 Pfam PF01420 Type I restriction modification DNA specificity domain 229 395 3.8E-20 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XFC3_02835 1834854118c026864d79d014949d1e54 357 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 XFC3_02835 1834854118c026864d79d014949d1e54 357 PIRSF PIRSF002401 1 357 2.7E-134 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type XFC3_02835 1834854118c026864d79d014949d1e54 357 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 341 3.8E-136 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 XFC3_02835 1834854118c026864d79d014949d1e54 357 Pfam PF01926 50S ribosome-binding GTPase 162 294 1.6E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_02835 1834854118c026864d79d014949d1e54 357 Pfam PF01018 GTP1/OBG 4 158 1.3E-60 T 11-10-2018 IPR006169 GTP1/OBG domain XFC3_02835 1834854118c026864d79d014949d1e54 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_02835 1834854118c026864d79d014949d1e54 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_02835 1834854118c026864d79d014949d1e54 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_02835 1834854118c026864d79d014949d1e54 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_02835 1834854118c026864d79d014949d1e54 357 Gene3D G3DSA:3.40.50.300 159 349 1.9E-46 T 11-10-2018 XFC3_02835 1834854118c026864d79d014949d1e54 357 Gene3D G3DSA:2.70.210.12 1 158 9.9E-63 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily XFC3_02835 1834854118c026864d79d014949d1e54 357 Hamap MF_01454 GTPase Obg [obg]. 2 343 47.353 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 XFC3_02835 1834854118c026864d79d014949d1e54 357 SUPERFAMILY SSF52540 151 346 3.79E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02835 1834854118c026864d79d014949d1e54 357 SUPERFAMILY SSF82051 2 158 2.75E-59 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily XFC3_10920 4383ee3b78fa57b99b9474e249753b15 477 Gene3D G3DSA:3.90.190.20 317 472 2.6E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFC3_10920 4383ee3b78fa57b99b9474e249753b15 477 SUPERFAMILY SSF51984 17 102 6.54E-26 T 11-10-2018 XFC3_10920 4383ee3b78fa57b99b9474e249753b15 477 SUPERFAMILY SSF53623 101 317 1.3E-70 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFC3_10920 4383ee3b78fa57b99b9474e249753b15 477 SUPERFAMILY SSF53244 319 467 2.56E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFC3_10920 4383ee3b78fa57b99b9474e249753b15 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 335 410 9.8E-18 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XFC3_10920 4383ee3b78fa57b99b9474e249753b15 477 Pfam PF01225 Mur ligase family, catalytic domain 18 114 3.5E-25 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XFC3_10920 4383ee3b78fa57b99b9474e249753b15 477 Pfam PF08245 Mur ligase middle domain 120 299 3.9E-29 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XFC3_10920 4383ee3b78fa57b99b9474e249753b15 477 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 473 42.678 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_10920 4383ee3b78fa57b99b9474e249753b15 477 Gene3D G3DSA:3.40.50.720 17 102 2.6E-30 T 11-10-2018 XFC3_10920 4383ee3b78fa57b99b9474e249753b15 477 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 18 466 9.0E-160 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_10920 4383ee3b78fa57b99b9474e249753b15 477 Gene3D G3DSA:3.40.1190.10 104 316 1.6E-81 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 4.6E-72 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 Gene3D G3DSA:3.40.190.10 101 200 2.1E-77 T 11-10-2018 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 PIRSF PIRSF001438 1 305 5.0E-107 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 SUPERFAMILY SSF54782 218 303 8.76E-20 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 36.2 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 Gene3D G3DSA:3.30.160.40 220 303 1.3E-19 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 Gene3D G3DSA:3.40.190.10 4 208 2.1E-77 T 11-10-2018 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 SUPERFAMILY SSF53850 3 215 8.9E-78 T 11-10-2018 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 4.6E-11 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 2.0E-40 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 2.0E-40 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 2.0E-40 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 2.0E-40 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 2.0E-40 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_06650 fe8bb88144d350a6dc1de9860d021712 305 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 7.1E-99 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_11625 410ddb3339cf8f160ba17ae4239a8547 149 Gene3D G3DSA:3.10.430.100 61 147 3.5E-23 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily XFC3_11625 410ddb3339cf8f160ba17ae4239a8547 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 6.7E-42 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11625 410ddb3339cf8f160ba17ae4239a8547 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11625 410ddb3339cf8f160ba17ae4239a8547 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.143 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11625 410ddb3339cf8f160ba17ae4239a8547 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 7.2E-21 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal XFC3_11625 410ddb3339cf8f160ba17ae4239a8547 149 Gene3D G3DSA:3.40.5.10 1 50 5.2E-22 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11625 410ddb3339cf8f160ba17ae4239a8547 149 SUPERFAMILY SSF55653 61 146 1.44E-21 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily XFC3_11625 410ddb3339cf8f160ba17ae4239a8547 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 9.0E-21 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11625 410ddb3339cf8f160ba17ae4239a8547 149 SUPERFAMILY SSF55658 1 57 1.45E-17 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal XFC3_02540 76789c88ec01150b13da4b1d4f2b5c93 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 245 3.1E-58 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XFC3_02540 76789c88ec01150b13da4b1d4f2b5c93 411 Gene3D G3DSA:3.40.47.10 256 400 1.5E-55 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_02540 76789c88ec01150b13da4b1d4f2b5c93 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 409 3.5E-196 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 XFC3_02540 76789c88ec01150b13da4b1d4f2b5c93 411 SUPERFAMILY SSF53901 213 410 1.92E-74 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_02540 76789c88ec01150b13da4b1d4f2b5c93 411 SMART SM00825 Beta-ketoacyl synthase 5 411 2.6E-16 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XFC3_02540 76789c88ec01150b13da4b1d4f2b5c93 411 Gene3D G3DSA:3.40.47.10 1 254 1.1E-86 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_02540 76789c88ec01150b13da4b1d4f2b5c93 411 PIRSF PIRSF000447 1 411 6.0E-185 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 XFC3_02540 76789c88ec01150b13da4b1d4f2b5c93 411 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site XFC3_02540 76789c88ec01150b13da4b1d4f2b5c93 411 SUPERFAMILY SSF53901 2 251 1.07E-76 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_02540 76789c88ec01150b13da4b1d4f2b5c93 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 2.2E-40 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XFC3_08845 e1705667dc5d42bb1449ee39f0f87ca6 332 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 325 2.0E-34 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_08845 e1705667dc5d42bb1449ee39f0f87ca6 332 SUPERFAMILY SSF56553 53 177 4.19E-41 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_08845 e1705667dc5d42bb1449ee39f0f87ca6 332 Gene3D G3DSA:1.10.150.20 245 327 6.4E-34 T 11-10-2018 XFC3_08845 e1705667dc5d42bb1449ee39f0f87ca6 332 Gene3D G3DSA:2.170.120.12 53 176 1.0E-78 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_08845 e1705667dc5d42bb1449ee39f0f87ca6 332 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 314 2.8E-104 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_08845 e1705667dc5d42bb1449ee39f0f87ca6 332 SMART SM00662 23 233 1.2E-103 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_08845 e1705667dc5d42bb1449ee39f0f87ca6 332 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 33.482 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_08845 e1705667dc5d42bb1449ee39f0f87ca6 332 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 307 2.0E-23 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_08845 e1705667dc5d42bb1449ee39f0f87ca6 332 SUPERFAMILY SSF55257 10 232 9.81E-31 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_08845 e1705667dc5d42bb1449ee39f0f87ca6 332 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 154 5.0E-23 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_08845 e1705667dc5d42bb1449ee39f0f87ca6 332 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 3.0E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_08845 e1705667dc5d42bb1449ee39f0f87ca6 332 SUPERFAMILY SSF47789 250 323 1.18E-24 T 11-10-2018 XFC3_08845 e1705667dc5d42bb1449ee39f0f87ca6 332 Gene3D G3DSA:3.30.1360.10 17 227 1.0E-78 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_07745 3663110b506ea34a8e48ba3143c041b7 106 SUPERFAMILY SSF54736 21 105 6.28E-31 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XFC3_07745 3663110b506ea34a8e48ba3143c041b7 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 16 101 27.365 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS XFC3_07745 3663110b506ea34a8e48ba3143c041b7 106 Gene3D G3DSA:3.30.1390.10 1 106 3.4E-40 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XFC3_07745 3663110b506ea34a8e48ba3143c041b7 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 5.2E-32 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 XFC3_07220 cdd441f8932ee071016234bf9214dc83 237 Gene3D G3DSA:3.40.50.620 9 237 3.6E-67 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_07220 cdd441f8932ee071016234bf9214dc83 237 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 25 235 2.1E-81 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 XFC3_07220 cdd441f8932ee071016234bf9214dc83 237 PIRSF PIRSF000857 8 237 3.0E-60 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 XFC3_07220 cdd441f8932ee071016234bf9214dc83 237 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 13 234 2.1E-84 T 11-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 XFC3_07220 cdd441f8932ee071016234bf9214dc83 237 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 40 212 6.3E-53 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 XFC3_07220 cdd441f8932ee071016234bf9214dc83 237 SUPERFAMILY SSF52402 13 200 1.06E-57 T 11-10-2018 XFC3_07220 cdd441f8932ee071016234bf9214dc83 237 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 1 235 39.931 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 XFC3_04900 05a19f46646a06cc1f685f9c8168f758 249 SMART SM00967 7 83 1.1E-12 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 XFC3_04900 05a19f46646a06cc1f685f9c8168f758 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 6 246 1.3E-70 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 XFC3_04900 05a19f46646a06cc1f685f9c8168f758 249 Gene3D G3DSA:3.40.1280.10 81 247 3.6E-58 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XFC3_04900 05a19f46646a06cc1f685f9c8168f758 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 5 247 39.451 T 11-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB XFC3_04900 05a19f46646a06cc1f685f9c8168f758 249 Pfam PF00588 SpoU rRNA Methylase family 100 239 6.8E-39 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 XFC3_04900 05a19f46646a06cc1f685f9c8168f758 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 81 1.4E-11 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 XFC3_04900 05a19f46646a06cc1f685f9c8168f758 249 Gene3D G3DSA:3.30.1330.30 1 78 3.0E-15 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like XFC3_04900 05a19f46646a06cc1f685f9c8168f758 249 SUPERFAMILY SSF55315 1 76 1.07E-14 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like XFC3_04900 05a19f46646a06cc1f685f9c8168f758 249 SUPERFAMILY SSF75217 75 247 1.44E-48 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases XFC3_10245 3e100f529004bc88e8f5995900000104 154 SUPERFAMILY SSF52121 4 153 9.16E-53 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFC3_10245 3e100f529004bc88e8f5995900000104 154 Gene3D G3DSA:3.40.50.960 1 154 4.0E-55 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFC3_10245 3e100f529004bc88e8f5995900000104 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 27.506 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFC3_10245 3e100f529004bc88e8f5995900000104 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 149 2.6E-40 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFC3_10245 3e100f529004bc88e8f5995900000104 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 1.5E-49 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFC3_07935 6e3c14a8cdaa6807113b6d39032c86ab 163 ProSitePatterns PS00935 Glyoxalase I signature 2. 100 116 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 XFC3_07935 6e3c14a8cdaa6807113b6d39032c86ab 163 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 156 4.4E-21 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain XFC3_07935 6e3c14a8cdaa6807113b6d39032c86ab 163 Gene3D G3DSA:3.10.180.10 1 160 1.9E-57 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XFC3_07935 6e3c14a8cdaa6807113b6d39032c86ab 163 SUPERFAMILY SSF54593 10 161 1.88E-32 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XFC3_07935 6e3c14a8cdaa6807113b6d39032c86ab 163 ProSitePatterns PS00934 Glyoxalase I signature 1. 15 36 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 XFC3_07935 6e3c14a8cdaa6807113b6d39032c86ab 163 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 7 160 6.2E-45 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 XFC3_07585 49c975223868e4eb8837b0d9c065c44c 155 SUPERFAMILY SSF82199 4 150 5.36E-40 T 11-10-2018 XFC3_07585 49c975223868e4eb8837b0d9c065c44c 155 SMART SM00317 3 128 2.9E-30 T 11-10-2018 IPR001214 SET domain GO:0005515 XFC3_07585 49c975223868e4eb8837b0d9c065c44c 155 Pfam PF00856 SET domain 14 122 1.2E-17 T 11-10-2018 IPR001214 SET domain GO:0005515 XFC3_07585 49c975223868e4eb8837b0d9c065c44c 155 Gene3D G3DSA:2.170.270.10 1 155 2.7E-41 T 11-10-2018 XFC3_02590 51c6d25aa2adf658e7ce059e768bd332 342 Pfam PF13394 4Fe-4S single cluster domain 122 193 3.2E-5 T 11-10-2018 XFC3_02590 51c6d25aa2adf658e7ce059e768bd332 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 22 335 1.8E-86 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase XFC3_02590 51c6d25aa2adf658e7ce059e768bd332 342 Gene3D G3DSA:3.20.20.70 57 341 8.9E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_02590 51c6d25aa2adf658e7ce059e768bd332 342 PIRSF PIRSF004911 12 342 1.1E-102 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase XFC3_02590 51c6d25aa2adf658e7ce059e768bd332 342 SUPERFAMILY SSF102114 112 331 8.63E-21 T 11-10-2018 XFC3_02590 51c6d25aa2adf658e7ce059e768bd332 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 22 341 3.6E-134 T 11-10-2018 IPR022462 Lysine-2,3-aminomutase-like XFC3_04230 432c0e6e89bb04ea5bb75bd946209491 236 Gene3D G3DSA:1.20.58.220 115 226 2.2E-31 T 11-10-2018 IPR038078 PhoU-like domain superfamily XFC3_04230 432c0e6e89bb04ea5bb75bd946209491 236 Gene3D G3DSA:1.20.58.220 1 114 1.9E-30 T 11-10-2018 IPR038078 PhoU-like domain superfamily XFC3_04230 432c0e6e89bb04ea5bb75bd946209491 236 PIRSF PIRSF003107 7 222 2.3E-55 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 XFC3_04230 432c0e6e89bb04ea5bb75bd946209491 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 11 220 5.5E-59 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 XFC3_04230 432c0e6e89bb04ea5bb75bd946209491 236 SUPERFAMILY SSF109755 11 221 2.3E-62 T 11-10-2018 XFC3_04230 432c0e6e89bb04ea5bb75bd946209491 236 Pfam PF01895 PhoU domain 127 210 1.6E-16 T 11-10-2018 IPR026022 PhoU domain XFC3_04230 432c0e6e89bb04ea5bb75bd946209491 236 Pfam PF01895 PhoU domain 24 110 8.7E-19 T 11-10-2018 IPR026022 PhoU domain XFC3_12095 e139c129364b4a75f70f88b402dad8bb 658 Gene3D G3DSA:3.40.50.300 272 622 5.2E-105 T 11-10-2018 XFC3_12095 e139c129364b4a75f70f88b402dad8bb 658 SUPERFAMILY SSF52540 2 628 6.35E-157 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_12095 e139c129364b4a75f70f88b402dad8bb 658 Gene3D G3DSA:3.40.50.300 4 265 3.6E-84 T 11-10-2018 XFC3_12095 e139c129364b4a75f70f88b402dad8bb 658 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 4 657 0.0 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 XFC3_12095 e139c129364b4a75f70f88b402dad8bb 658 Gene3D G3DSA:1.10.486.10 375 534 5.2E-105 T 11-10-2018 XFC3_12095 e139c129364b4a75f70f88b402dad8bb 658 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 263 2.1E-66 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 XFC3_12095 e139c129364b4a75f70f88b402dad8bb 658 Pfam PF13361 UvrD-like helicase C-terminal domain 269 603 6.9E-63 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XFC3_12095 e139c129364b4a75f70f88b402dad8bb 658 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 658 35.918 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 XFC3_12095 e139c129364b4a75f70f88b402dad8bb 658 Gene3D G3DSA:1.10.10.160 106 181 3.6E-84 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily XFC3_06525 2e988d09c2bddf8a5aee52df16b8f212 96 Pfam PF13560 Helix-turn-helix domain 24 83 5.3E-12 T 11-10-2018 XFC3_06525 2e988d09c2bddf8a5aee52df16b8f212 96 SUPERFAMILY SSF47413 23 88 2.17E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_06525 2e988d09c2bddf8a5aee52df16b8f212 96 SMART SM00530 28 83 4.8E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_06525 2e988d09c2bddf8a5aee52df16b8f212 96 Gene3D G3DSA:1.10.260.40 23 95 4.6E-16 T 11-10-2018 XFC3_06060 037e50bf1872dd8e4649624f4945e975 683 SUPERFAMILY SSF54001 275 582 4.03E-61 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XFC3_06060 037e50bf1872dd8e4649624f4945e975 683 Gene3D G3DSA:3.10.620.30 340 506 2.1E-24 T 11-10-2018 XFC3_06060 037e50bf1872dd8e4649624f4945e975 683 Pfam PF01841 Transglutaminase-like superfamily 365 471 5.6E-27 T 11-10-2018 IPR002931 Transglutaminase-like XFC3_06060 037e50bf1872dd8e4649624f4945e975 683 SMART SM00460 402 473 3.4E-19 T 11-10-2018 IPR002931 Transglutaminase-like XFC3_06060 037e50bf1872dd8e4649624f4945e975 683 Pfam PF11992 Domain of unknown function (DUF3488) 14 325 2.9E-73 T 11-10-2018 IPR021878 Protein of unknown function DUF3488 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 SUPERFAMILY SSF46589 930 994 3.77E-16 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 994 15.391 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 930 994 6.6E-19 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 Gene3D G3DSA:1.10.730.10 612 863 1.9E-65 T 11-10-2018 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 Gene3D G3DSA:3.90.740.10 200 391 3.6E-45 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 Pfam PF08264 Anticodon-binding domain of tRNA 718 869 2.2E-39 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 SUPERFAMILY SSF47323 673 945 6.73E-58 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 4.7E-30 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 PRINTS PR00986 Valyl-tRNA synthetase signature 251 268 4.7E-30 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 PRINTS PR00986 Valyl-tRNA synthetase signature 502 523 4.7E-30 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 PRINTS PR00986 Valyl-tRNA synthetase signature 537 555 4.7E-30 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 662 3.5E-190 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 976 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 SUPERFAMILY SSF52374 2 672 1.52E-124 T 11-10-2018 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 Gene3D G3DSA:3.40.50.620 392 611 1.5E-57 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 SUPERFAMILY SSF50677 195 398 1.83E-50 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 Gene3D G3DSA:3.40.50.620 5 199 1.9E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_00545 8c30b826fccd319bc8d4f23406d5179b 994 Gene3D G3DSA:1.10.287.380 923 994 3.0E-21 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 XFC3_08745 18c36eddb0ab08657ed351bad92f97a3 830 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 212 817 1.2E-166 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFC3_08745 18c36eddb0ab08657ed351bad92f97a3 830 SUPERFAMILY SSF48168 72 293 7.46E-51 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFC3_08745 18c36eddb0ab08657ed351bad92f97a3 830 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 687 709 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFC3_08745 18c36eddb0ab08657ed351bad92f97a3 830 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 208 289 3.3E-14 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFC3_08745 18c36eddb0ab08657ed351bad92f97a3 830 Gene3D G3DSA:3.20.70.20 139 823 5.4E-195 T 11-10-2018 XFC3_08745 18c36eddb0ab08657ed351bad92f97a3 830 SUPERFAMILY SSF51998 294 819 9.16E-165 T 11-10-2018 XFC3_08745 18c36eddb0ab08657ed351bad92f97a3 830 Pfam PF02867 Ribonucleotide reductase, barrel domain 295 814 1.8E-143 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFC3_08745 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 698 725 1.1E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFC3_08745 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 571 594 1.1E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFC3_08745 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 370 389 1.1E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFC3_08745 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 637 660 1.1E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFC3_08745 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 609 631 1.1E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFC3_08745 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 513 524 1.1E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFC3_09070 176a94c5774c5f2d24a984a257b92b06 189 PIRSF PIRSF006305 1 189 7.4E-46 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 XFC3_09070 176a94c5774c5f2d24a984a257b92b06 189 SUPERFAMILY SSF52972 1 184 2.03E-53 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XFC3_09070 176a94c5774c5f2d24a984a257b92b06 189 Pfam PF02545 Maf-like protein 2 185 2.8E-49 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 XFC3_09070 176a94c5774c5f2d24a984a257b92b06 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 183 1.4E-47 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 XFC3_09070 176a94c5774c5f2d24a984a257b92b06 189 Gene3D G3DSA:3.90.950.10 1 189 9.9E-59 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XFC3_09070 176a94c5774c5f2d24a984a257b92b06 189 Hamap MF_00528 Septum formation protein Maf [maf]. 1 189 29.105 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 XFC3_02225 1cde89a53ee95013a1387f947938bf7f 216 Pfam PF16357 Putative PepSY_TM-like 22 216 1.2E-81 T 11-10-2018 IPR032307 Putative PepSY TM-like protein XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 Pfam PF00549 CoA-ligase 152 270 9.8E-19 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 2.3E-138 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 Pfam PF02629 CoA binding domain 6 99 3.2E-31 T 11-10-2018 IPR003781 CoA-binding GO:0048037 XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 PIRSF PIRSF001553 1 290 3.2E-130 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 SUPERFAMILY SSF51735 1 123 2.25E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 289 43.35 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 Gene3D G3DSA:3.40.50.720 2 124 3.7E-52 T 11-10-2018 XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 SUPERFAMILY SSF52210 124 289 4.19E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 Gene3D G3DSA:3.40.50.261 125 290 6.7E-72 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 153 182 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 SMART SM00881 4 100 1.3E-35 T 11-10-2018 IPR003781 CoA-binding GO:0048037 XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 PRINTS PR01798 Succinyl-CoA synthase signature 178 196 3.1E-35 T 11-10-2018 XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 3.1E-35 T 11-10-2018 XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 3.1E-35 T 11-10-2018 XFC3_11565 ffd0a9448a48a6333a3be9426cef1e8d 290 PRINTS PR01798 Succinyl-CoA synthase signature 209 222 3.1E-35 T 11-10-2018 XFC3_01025 d9ef1d97d6eed058874d4ac93d0be155 86 Gene3D G3DSA:1.10.287.10 2 86 2.3E-33 T 11-10-2018 XFC3_01025 d9ef1d97d6eed058874d4ac93d0be155 86 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 86 21.234 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_01025 d9ef1d97d6eed058874d4ac93d0be155 86 Pfam PF00312 Ribosomal protein S15 6 85 6.2E-36 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_01025 d9ef1d97d6eed058874d4ac93d0be155 86 SMART SM01387 5 85 5.1E-47 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_01025 d9ef1d97d6eed058874d4ac93d0be155 86 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 3 86 1.8E-36 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_01025 d9ef1d97d6eed058874d4ac93d0be155 86 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 8 85 1.0E-38 T 11-10-2018 XFC3_01025 d9ef1d97d6eed058874d4ac93d0be155 86 SUPERFAMILY SSF47060 4 86 1.18E-33 T 11-10-2018 IPR009068 S15/NS1, RNA-binding XFC3_01025 d9ef1d97d6eed058874d4ac93d0be155 86 ProSitePatterns PS00362 Ribosomal protein S15 signature. 36 66 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_02230 a0128506c49407ccc608e0da86bf8335 230 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 180 6.3E-14 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 XFC3_02230 a0128506c49407ccc608e0da86bf8335 230 SMART SM00702 1 181 3.4E-32 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 XFC3_02230 a0128506c49407ccc608e0da86bf8335 230 Gene3D G3DSA:2.60.120.620 1 182 2.9E-43 T 11-10-2018 XFC3_02230 a0128506c49407ccc608e0da86bf8335 230 Gene3D G3DSA:4.10.860.20 184 230 1.1E-17 T 11-10-2018 XFC3_02230 a0128506c49407ccc608e0da86bf8335 230 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 230 44.618 T 11-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 XFC3_09450 bcb245ea766b520bc104ee4b0f0fe8f7 979 SUPERFAMILY SSF52743 84 416 1.28E-61 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XFC3_09450 bcb245ea766b520bc104ee4b0f0fe8f7 979 Gene3D G3DSA:2.40.128.130 668 977 1.1E-36 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFC3_09450 bcb245ea766b520bc104ee4b0f0fe8f7 979 PRINTS PR00723 Subtilisin serine protease family (S8) signature 355 371 2.5E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFC3_09450 bcb245ea766b520bc104ee4b0f0fe8f7 979 PRINTS PR00723 Subtilisin serine protease family (S8) signature 141 154 2.5E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFC3_09450 bcb245ea766b520bc104ee4b0f0fe8f7 979 PRINTS PR00723 Subtilisin serine protease family (S8) signature 101 120 2.5E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFC3_09450 bcb245ea766b520bc104ee4b0f0fe8f7 979 Pfam PF00082 Subtilase family 101 406 5.5E-37 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 XFC3_09450 bcb245ea766b520bc104ee4b0f0fe8f7 979 Pfam PF12951 Passenger-associated-transport-repeat 446 475 1.7E-8 T 11-10-2018 IPR013425 Autotransporter-associated beta strand repeat XFC3_09450 bcb245ea766b520bc104ee4b0f0fe8f7 979 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 445 476 1.0E-10 T 11-10-2018 IPR013425 Autotransporter-associated beta strand repeat XFC3_09450 bcb245ea766b520bc104ee4b0f0fe8f7 979 SUPERFAMILY SSF103515 677 975 3.66E-37 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFC3_09450 bcb245ea766b520bc104ee4b0f0fe8f7 979 SMART SM00869 711 971 8.7E-24 T 11-10-2018 IPR005546 Autotransporter beta-domain XFC3_09450 bcb245ea766b520bc104ee4b0f0fe8f7 979 Pfam PF03797 Autotransporter beta-domain 715 950 2.0E-30 T 11-10-2018 IPR005546 Autotransporter beta-domain XFC3_09450 bcb245ea766b520bc104ee4b0f0fe8f7 979 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 106 117 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site XFC3_09450 bcb245ea766b520bc104ee4b0f0fe8f7 979 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 356 366 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site XFC3_09450 bcb245ea766b520bc104ee4b0f0fe8f7 979 Gene3D G3DSA:3.40.50.200 38 415 3.3E-62 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XFC3_11790 3f5b17d3687f91bf1d31a601df5cd2c1 107 Gene3D G3DSA:3.30.70.20 2 98 1.2E-30 T 11-10-2018 XFC3_11790 3f5b17d3687f91bf1d31a601df5cd2c1 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XFC3_11790 3f5b17d3687f91bf1d31a601df5cd2c1 107 Pfam PF00037 4Fe-4S binding domain 34 56 3.5E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XFC3_11790 3f5b17d3687f91bf1d31a601df5cd2c1 107 SUPERFAMILY SSF54862 2 85 1.03E-23 T 11-10-2018 XFC3_11790 3f5b17d3687f91bf1d31a601df5cd2c1 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 3.3E-17 T 11-10-2018 IPR022569 Ferredoxin, C-terminal XFC3_11790 3f5b17d3687f91bf1d31a601df5cd2c1 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.4E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 XFC3_11790 3f5b17d3687f91bf1d31a601df5cd2c1 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.4E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 XFC3_11790 3f5b17d3687f91bf1d31a601df5cd2c1 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.4E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 XFC3_09730 b2554b7ad416e0a2a90674465cc7b787 642 Gene3D G3DSA:2.60.40.10 412 505 6.6E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFC3_09730 b2554b7ad416e0a2a90674465cc7b787 642 Pfam PF11134 Phage stabilisation protein 73 277 6.3E-9 T 11-10-2018 IPR021098 Bacteriophage P22, Gp10, DNA-stabilising XFC3_09425 699c982d3d08dd13cf65a1c09ec416d7 480 Gene3D G3DSA:3.40.50.1480 15 480 2.1E-231 T 11-10-2018 XFC3_09425 699c982d3d08dd13cf65a1c09ec416d7 480 Gene3D G3DSA:3.40.50.720 241 401 2.1E-231 T 11-10-2018 XFC3_09425 699c982d3d08dd13cf65a1c09ec416d7 480 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 472 3.1E-189 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFC3_09425 699c982d3d08dd13cf65a1c09ec416d7 480 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 238 400 3.1E-80 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFC3_09425 699c982d3d08dd13cf65a1c09ec416d7 480 PIRSF PIRSF001109 1 480 1.1E-192 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFC3_09425 699c982d3d08dd13cf65a1c09ec416d7 480 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 260 276 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFC3_09425 699c982d3d08dd13cf65a1c09ec416d7 480 SMART SM00996 12 479 0.0 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFC3_09425 699c982d3d08dd13cf65a1c09ec416d7 480 SMART SM00997 238 400 2.4E-109 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFC3_09425 699c982d3d08dd13cf65a1c09ec416d7 480 SUPERFAMILY SSF51735 238 400 4.79E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_09425 699c982d3d08dd13cf65a1c09ec416d7 480 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 13 479 2.6E-146 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFC3_09425 699c982d3d08dd13cf65a1c09ec416d7 480 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFC3_09425 699c982d3d08dd13cf65a1c09ec416d7 480 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 472 48.235 T 11-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 XFC3_09425 699c982d3d08dd13cf65a1c09ec416d7 480 SUPERFAMILY SSF52283 11 480 2.72E-113 T 11-10-2018 XFC3_09315 62221b92e9dbc6bcb0290d9e9a1baea4 630 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 602 1.5E-272 T 11-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 XFC3_09315 62221b92e9dbc6bcb0290d9e9a1baea4 630 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFC3_09315 62221b92e9dbc6bcb0290d9e9a1baea4 630 SUPERFAMILY SSF143975 4 420 2.22E-135 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFC3_09315 62221b92e9dbc6bcb0290d9e9a1baea4 630 Pfam PF00920 Dehydratase family 68 598 1.5E-148 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFC3_09315 62221b92e9dbc6bcb0290d9e9a1baea4 630 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFC3_09315 62221b92e9dbc6bcb0290d9e9a1baea4 630 Gene3D G3DSA:3.50.30.80 421 570 6.6E-46 T 11-10-2018 XFC3_09315 62221b92e9dbc6bcb0290d9e9a1baea4 630 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 3 603 55.324 T 11-10-2018 XFC3_09315 62221b92e9dbc6bcb0290d9e9a1baea4 630 SUPERFAMILY SSF52016 421 600 3.22E-50 T 11-10-2018 XFC3_06735 c7fbe8aeeaebb816a8a4b881b4da8895 318 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 226 314 8.3E-26 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XFC3_06735 c7fbe8aeeaebb816a8a4b881b4da8895 318 SUPERFAMILY SSF54534 133 317 1.2E-49 T 11-10-2018 XFC3_06735 c7fbe8aeeaebb816a8a4b881b4da8895 318 Gene3D G3DSA:1.10.287.460 126 206 8.6E-13 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 XFC3_06735 c7fbe8aeeaebb816a8a4b881b4da8895 318 Gene3D G3DSA:1.10.287.460 34 125 6.0E-11 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 XFC3_06735 c7fbe8aeeaebb816a8a4b881b4da8895 318 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 126 218 1.2E-22 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 XFC3_06735 c7fbe8aeeaebb816a8a4b881b4da8895 318 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 34 112 1.6E-8 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 XFC3_06735 c7fbe8aeeaebb816a8a4b881b4da8895 318 Gene3D G3DSA:3.10.50.40 207 315 4.2E-39 T 11-10-2018 XFC3_00475 5479a388c929594585c93048251951d9 377 Gene3D G3DSA:3.30.70.360 179 292 1.1E-123 T 11-10-2018 XFC3_00475 5479a388c929594585c93048251951d9 377 SUPERFAMILY SSF55031 179 286 6.28E-27 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain XFC3_00475 5479a388c929594585c93048251951d9 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 1.0E-174 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 XFC3_00475 5479a388c929594585c93048251951d9 377 Gene3D G3DSA:3.40.630.10 7 362 1.1E-123 T 11-10-2018 XFC3_00475 5479a388c929594585c93048251951d9 377 Pfam PF07687 Peptidase dimerisation domain 175 282 8.9E-24 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain XFC3_00475 5479a388c929594585c93048251951d9 377 SUPERFAMILY SSF53187 2 374 4.98E-64 T 11-10-2018 XFC3_00475 5479a388c929594585c93048251951d9 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 49.778 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 XFC3_00475 5479a388c929594585c93048251951d9 377 Pfam PF01546 Peptidase family M20/M25/M40 63 371 6.5E-41 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 XFC3_00475 5479a388c929594585c93048251951d9 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 135 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 XFC3_11885 d83f873113b525682848c58f216ded07 705 Pfam PF00679 Elongation factor G C-terminus 614 700 1.8E-28 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like XFC3_11885 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11885 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11885 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11885 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11885 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11885 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF54211 487 613 2.38E-39 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_11885 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF54980 409 486 5.76E-26 T 11-10-2018 IPR035647 EF-G domain III/V-like XFC3_11885 d83f873113b525682848c58f216ded07 705 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 704 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFC3_11885 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:3.40.50.300 1 298 3.8E-114 T 11-10-2018 XFC3_11885 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:3.30.70.870 410 485 2.4E-34 T 11-10-2018 XFC3_11885 d83f873113b525682848c58f216ded07 705 SMART SM00838 614 701 7.5E-54 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like XFC3_11885 d83f873113b525682848c58f216ded07 705 Pfam PF03764 Elongation factor G, domain IV 484 612 4.2E-43 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 XFC3_11885 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF54980 617 704 2.45E-28 T 11-10-2018 IPR035647 EF-G domain III/V-like XFC3_11885 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:3.30.70.240 618 688 6.0E-83 T 11-10-2018 XFC3_11885 d83f873113b525682848c58f216ded07 705 Pfam PF03144 Elongation factor Tu domain 2 329 396 2.0E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XFC3_11885 d83f873113b525682848c58f216ded07 705 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 5.7E-32 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFC3_11885 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF52540 6 288 3.56E-105 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11885 d83f873113b525682848c58f216ded07 705 SMART SM00889 485 612 1.1E-68 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 XFC3_11885 d83f873113b525682848c58f216ded07 705 Pfam PF14492 Elongation Factor G, domain II 409 483 3.2E-35 T 11-10-2018 XFC3_11885 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF50447 255 407 7.73E-35 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFC3_11885 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:3.30.230.10 489 700 6.0E-83 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFC3_11885 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:2.40.30.10 299 405 1.3E-44 T 11-10-2018 XFC3_11885 d83f873113b525682848c58f216ded07 705 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site XFC3_11885 d83f873113b525682848c58f216ded07 705 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 7.5E-65 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_11885 d83f873113b525682848c58f216ded07 705 Hamap MF_00054_B Elongation factor G [fusA]. 6 705 109.297 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFC3_07245 1350e2d4852db8d9ede3af96b84e3f75 159 Gene3D G3DSA:1.10.10.10 1 159 4.8E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_07245 1350e2d4852db8d9ede3af96b84e3f75 159 Pfam PF01047 MarR family 46 101 7.4E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_07245 1350e2d4852db8d9ede3af96b84e3f75 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 3.4E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_07245 1350e2d4852db8d9ede3af96b84e3f75 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 3.4E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_07245 1350e2d4852db8d9ede3af96b84e3f75 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 3.4E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_07245 1350e2d4852db8d9ede3af96b84e3f75 159 SMART SM00347 37 137 1.0E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_07245 1350e2d4852db8d9ede3af96b84e3f75 159 SUPERFAMILY SSF46785 10 149 2.65E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_07980 4422892d0e42064d0b3b624b2f171293 980 Gene3D G3DSA:3.90.1150.10 769 908 1.3E-39 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFC3_07980 4422892d0e42064d0b3b624b2f171293 980 Pfam PF02347 Glycine cleavage system P-protein 445 800 2.6E-11 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XFC3_07980 4422892d0e42064d0b3b624b2f171293 980 Pfam PF02347 Glycine cleavage system P-protein 19 440 1.2E-174 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XFC3_07980 4422892d0e42064d0b3b624b2f171293 980 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 11 961 25.414 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XFC3_07980 4422892d0e42064d0b3b624b2f171293 980 SUPERFAMILY SSF53383 20 436 3.71E-100 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFC3_07980 4422892d0e42064d0b3b624b2f171293 980 Gene3D G3DSA:3.40.640.10 519 744 6.0E-59 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFC3_07980 4422892d0e42064d0b3b624b2f171293 980 Gene3D G3DSA:3.40.640.10 98 356 3.1E-107 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFC3_07980 4422892d0e42064d0b3b624b2f171293 980 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 20 955 0.0 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XFC3_07980 4422892d0e42064d0b3b624b2f171293 980 SUPERFAMILY SSF53383 470 956 3.88E-97 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 476 2.9E-152 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 PRINTS PR01050 Pyruvate kinase family signature 220 246 5.3E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 PRINTS PR01050 Pyruvate kinase family signature 190 204 5.3E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 PRINTS PR01050 Pyruvate kinase family signature 316 332 5.3E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 PRINTS PR01050 Pyruvate kinase family signature 297 315 5.3E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 PRINTS PR01050 Pyruvate kinase family signature 272 296 5.3E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 PRINTS PR01050 Pyruvate kinase family signature 63 79 5.3E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 PRINTS PR01050 Pyruvate kinase family signature 247 271 5.3E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 SUPERFAMILY SSF52935 326 476 8.5E-37 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 SUPERFAMILY SSF51621 4 342 4.54E-87 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 Gene3D G3DSA:3.40.1380.20 339 472 2.0E-153 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 Pfam PF00224 Pyruvate kinase, barrel domain 6 342 4.4E-115 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 473 4.1E-25 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 SUPERFAMILY SSF50800 74 171 1.29E-22 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 Gene3D G3DSA:2.40.33.10 74 172 2.0E-153 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFC3_10830 a232c91f5d6654271b82e3d86dd76d17 488 Gene3D G3DSA:3.20.20.60 6 338 2.0E-153 T 11-10-2018 XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 PRINTS PR00625 DnaJ domain signature 25 40 8.6E-29 T 11-10-2018 IPR001623 DnaJ domain XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 PRINTS PR00625 DnaJ domain signature 7 25 8.6E-29 T 11-10-2018 IPR001623 DnaJ domain XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 PRINTS PR00625 DnaJ domain signature 42 62 8.6E-29 T 11-10-2018 IPR001623 DnaJ domain XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 PRINTS PR00625 DnaJ domain signature 62 81 8.6E-29 T 11-10-2018 IPR001623 DnaJ domain XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 SMART SM00271 4 62 7.4E-30 T 11-10-2018 IPR001623 DnaJ domain XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 362 39.183 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 SUPERFAMILY SSF49493 104 246 5.1E-19 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Pfam PF00226 DnaJ domain 5 67 6.1E-26 T 11-10-2018 IPR001623 DnaJ domain XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Gene3D G3DSA:1.10.287.110 1 107 8.3E-33 T 11-10-2018 IPR036869 Chaperone J-domain superfamily XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Pfam PF01556 DnaJ C terminal domain 112 322 1.1E-41 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 337 3.8E-126 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Gene3D G3DSA:2.60.260.20 108 238 2.5E-38 T 11-10-2018 XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 SUPERFAMILY SSF57938 124 199 1.44E-20 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 SUPERFAMILY SSF49493 248 333 3.66E-20 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 SUPERFAMILY SSF46565 1 100 3.66E-33 T 11-10-2018 IPR036869 Chaperone J-domain superfamily XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Gene3D G3DSA:2.10.230.10 137 196 2.5E-38 T 11-10-2018 XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Pfam PF00684 DnaJ central domain 137 196 1.7E-13 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 XFC3_03170 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Gene3D G3DSA:2.60.260.20 243 351 4.6E-28 T 11-10-2018 XFC3_07645 e2f851f9d098f902971258fab1a1ea24 346 Pfam PF01380 SIS domain 208 288 1.3E-14 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XFC3_07645 e2f851f9d098f902971258fab1a1ea24 346 Pfam PF01380 SIS domain 53 174 3.9E-17 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XFC3_07645 e2f851f9d098f902971258fab1a1ea24 346 Gene3D G3DSA:3.40.50.10490 204 331 9.1E-41 T 11-10-2018 XFC3_07645 e2f851f9d098f902971258fab1a1ea24 346 SUPERFAMILY SSF53697 15 344 1.8E-69 T 11-10-2018 XFC3_07645 e2f851f9d098f902971258fab1a1ea24 346 Gene3D G3DSA:3.40.50.10490 10 199 4.7E-43 T 11-10-2018 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 Gene3D G3DSA:3.40.120.10 170 247 7.7E-30 T 11-10-2018 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 366 2.3E-22 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 SUPERFAMILY SSF55957 366 449 1.01E-18 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 Gene3D G3DSA:3.40.120.10 248 366 3.1E-34 T 11-10-2018 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 SUPERFAMILY SSF53738 4 175 6.47E-35 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 2.8E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 2.8E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 231 246 2.8E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 202 215 2.8E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 SUPERFAMILY SSF53738 256 360 1.88E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 371 447 1.0E-11 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 251 7.1E-23 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 Gene3D G3DSA:3.30.310.50 367 449 2.8E-27 T 11-10-2018 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 Gene3D G3DSA:3.40.120.10 1 147 3.4E-53 T 11-10-2018 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 129 4.8E-34 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_01120 5a08db3b6284d9ea66d4a93b0ee75892 449 SUPERFAMILY SSF53738 151 254 3.85E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFC3_07590 5c429f92629b598ec1a8cb36e4e16d05 153 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 1.0E-30 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type XFC3_07590 5c429f92629b598ec1a8cb36e4e16d05 153 Gene3D G3DSA:1.10.10.10 1 141 3.3E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_07590 5c429f92629b598ec1a8cb36e4e16d05 153 Pfam PF02082 Transcriptional regulator 3 83 2.4E-23 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type XFC3_07590 5c429f92629b598ec1a8cb36e4e16d05 153 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 3.3E-53 T 11-10-2018 IPR014290 SUF system FeS cluster assembly regulator XFC3_07590 5c429f92629b598ec1a8cb36e4e16d05 153 SUPERFAMILY SSF46785 3 134 1.09E-34 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_01625 350fa848db5ca90b60c218cc810c9dad 340 Gene3D G3DSA:1.20.120.1460 262 335 3.5E-16 T 11-10-2018 XFC3_01625 350fa848db5ca90b60c218cc810c9dad 340 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 12 332 47.216 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 XFC3_01625 350fa848db5ca90b60c218cc810c9dad 340 Pfam PF01207 Dihydrouridine synthase (Dus) 20 323 5.4E-71 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 XFC3_01625 350fa848db5ca90b60c218cc810c9dad 340 PIRSF PIRSF006621 5 340 2.1E-78 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 XFC3_01625 350fa848db5ca90b60c218cc810c9dad 340 SUPERFAMILY SSF51395 17 311 4.58E-63 T 11-10-2018 XFC3_01625 350fa848db5ca90b60c218cc810c9dad 340 Gene3D G3DSA:3.20.20.70 15 255 2.4E-67 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_01625 350fa848db5ca90b60c218cc810c9dad 340 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 99 117 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 XFC3_03120 26d34be70db4c6b91b1717e0fc3c059c 732 SUPERFAMILY SSF103515 485 732 5.1E-26 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFC3_03120 26d34be70db4c6b91b1717e0fc3c059c 732 SMART SM00869 474 721 1.1E-5 T 11-10-2018 IPR005546 Autotransporter beta-domain XFC3_03120 26d34be70db4c6b91b1717e0fc3c059c 732 Gene3D G3DSA:2.40.128.130 456 732 7.1E-15 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFC3_11735 452c7a8b1d40ec437403eb07fa7b3b31 250 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 249 109.403 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 XFC3_11735 452c7a8b1d40ec437403eb07fa7b3b31 250 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 212 3.1E-8 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 XFC3_11735 452c7a8b1d40ec437403eb07fa7b3b31 250 SUPERFAMILY SSF56300 1 240 1.57E-30 T 11-10-2018 XFC3_11735 452c7a8b1d40ec437403eb07fa7b3b31 250 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 240 6.2E-95 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 XFC3_11735 452c7a8b1d40ec437403eb07fa7b3b31 250 Gene3D G3DSA:3.60.21.10 1 241 4.5E-14 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like XFC3_08955 5759893db43fe3d7ac28c55c28a01380 215 ProSitePatterns PS00474 Ribosomal protein L3 signature. 107 130 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site XFC3_08955 5759893db43fe3d7ac28c55c28a01380 215 Gene3D G3DSA:2.40.30.10 135 215 2.4E-14 T 11-10-2018 XFC3_08955 5759893db43fe3d7ac28c55c28a01380 215 Gene3D G3DSA:2.40.50.620 36 100 2.6E-15 T 11-10-2018 XFC3_08955 5759893db43fe3d7ac28c55c28a01380 215 SUPERFAMILY SSF50447 4 214 1.94E-75 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFC3_08955 5759893db43fe3d7ac28c55c28a01380 215 Pfam PF00297 Ribosomal protein L3 105 188 2.1E-13 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08955 5759893db43fe3d7ac28c55c28a01380 215 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 5 213 38.7 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08955 5759893db43fe3d7ac28c55c28a01380 215 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 7 210 4.9E-84 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 SUPERFAMILY SSF48113 449 753 1.62E-108 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 SUPERFAMILY SSF48113 20 447 1.29E-151 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 Gene3D G3DSA:1.10.420.10 606 729 3.2E-145 T 11-10-2018 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 Gene3D G3DSA:1.10.420.20 191 416 3.3E-225 T 11-10-2018 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 278 288 - T 11-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 Hamap MF_01961 Catalase-peroxidase [katG]. 9 754 41.765 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 13 754 0.0 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 11-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 6.7E-13 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00458 Haem peroxidase superfamily signature 337 352 6.7E-13 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 6.7E-13 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 6.7E-13 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 Gene3D G3DSA:1.10.520.10 452 753 3.2E-145 T 11-10-2018 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 499 525 4.5E-56 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 4.5E-56 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 286 309 4.5E-56 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 4.5E-56 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 4.5E-56 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 Pfam PF00141 Peroxidase 423 727 2.1E-34 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 Pfam PF00141 Peroxidase 77 413 1.8E-48 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFC3_03615 6546295a699fc6a2708e3b6615645eb4 754 Gene3D G3DSA:1.10.520.10 20 449 3.3E-225 T 11-10-2018 XFC3_01565 6f15ec86c7da225f179f1f35939822be 222 Pfam PF04350 Pilus assembly protein, PilO 54 201 1.6E-50 T 11-10-2018 IPR007445 Pilus assembly protein, PilO XFC3_01565 6f15ec86c7da225f179f1f35939822be 222 PIRSF PIRSF016482 1 219 1.0E-103 T 11-10-2018 IPR007445 Pilus assembly protein, PilO XFC3_01565 6f15ec86c7da225f179f1f35939822be 222 Gene3D G3DSA:3.30.70.60 96 211 5.8E-34 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 SUPERFAMILY SSF47819 527 596 2.03E-21 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 Pfam PF00570 HRDC domain 529 596 1.3E-22 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 SUPERFAMILY SSF52540 202 454 1.35E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 8 598 2.5E-281 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 Pfam PF09382 RQC domain 403 509 2.3E-43 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 SMART SM00487 16 212 2.2E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 Gene3D G3DSA:1.10.10.10 336 521 1.0E-53 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 SMART SM00956 406 509 2.7E-59 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 Pfam PF16124 RecQ zinc-binding 337 399 1.2E-19 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 Gene3D G3DSA:1.10.150.80 526 599 1.7E-21 T 11-10-2018 XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 SMART SM00341 526 599 5.8E-11 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 SUPERFAMILY SSF52540 4 191 1.36E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 10 458 3.5E-155 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 Pfam PF00271 Helicase conserved C-terminal domain 221 324 8.5E-13 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 Gene3D G3DSA:3.40.50.300 1 202 9.8E-81 T 11-10-2018 XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 Pfam PF00270 DEAD/DEAH box helicase 24 179 3.4E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 Gene3D G3DSA:3.40.50.300 203 334 1.1E-35 T 11-10-2018 XFC3_08005 74e57ef5cfb8fc8139426d0b53c861e6 600 SMART SM00490 244 325 5.5E-23 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_08435 cea2a9e8fe81e659b3804344114bd0f3 438 Pfam PF00571 CBS domain 215 269 0.0028 T 11-10-2018 IPR000644 CBS domain XFC3_08435 cea2a9e8fe81e659b3804344114bd0f3 438 Pfam PF00571 CBS domain 283 330 6.7E-8 T 11-10-2018 IPR000644 CBS domain XFC3_08435 cea2a9e8fe81e659b3804344114bd0f3 438 Gene3D G3DSA:3.10.580.10 191 339 1.5E-39 T 11-10-2018 XFC3_08435 cea2a9e8fe81e659b3804344114bd0f3 438 Pfam PF01595 Domain of unknown function DUF21 6 197 4.3E-45 T 11-10-2018 IPR002550 CNNM, transmembrane domain XFC3_08435 cea2a9e8fe81e659b3804344114bd0f3 438 SMART SM00116 283 331 0.0052 T 11-10-2018 IPR000644 CBS domain XFC3_08435 cea2a9e8fe81e659b3804344114bd0f3 438 SMART SM00116 221 270 0.66 T 11-10-2018 IPR000644 CBS domain XFC3_08435 cea2a9e8fe81e659b3804344114bd0f3 438 Gene3D G3DSA:3.30.465.10 340 428 6.9E-36 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XFC3_08435 cea2a9e8fe81e659b3804344114bd0f3 438 Pfam PF03471 Transporter associated domain 349 427 3.6E-21 T 11-10-2018 IPR005170 Transporter-associated domain XFC3_08435 cea2a9e8fe81e659b3804344114bd0f3 438 SUPERFAMILY SSF54631 199 332 5.43E-27 T 11-10-2018 XFC3_08435 cea2a9e8fe81e659b3804344114bd0f3 438 SMART SM01091 347 428 8.4E-32 T 11-10-2018 IPR005170 Transporter-associated domain XFC3_08435 cea2a9e8fe81e659b3804344114bd0f3 438 SUPERFAMILY SSF56176 342 427 4.09E-24 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XFC3_03685 dd59de563eeab12486c3b6a9901897cb 375 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 1 375 48.402 T 11-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 XFC3_03685 dd59de563eeab12486c3b6a9901897cb 375 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 146 4.0E-18 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 XFC3_03685 dd59de563eeab12486c3b6a9901897cb 375 Gene3D G3DSA:3.30.230.40 275 375 4.1E-36 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 XFC3_03685 dd59de563eeab12486c3b6a9901897cb 375 SUPERFAMILY SSF54211 276 361 2.91E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_03685 dd59de563eeab12486c3b6a9901897cb 375 SUPERFAMILY SSF54211 169 253 8.35E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_03685 dd59de563eeab12486c3b6a9901897cb 375 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 357 2.2E-63 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XFC3_03685 dd59de563eeab12486c3b6a9901897cb 375 Gene3D G3DSA:3.40.50.1000 1 152 2.0E-34 T 11-10-2018 IPR023214 HAD superfamily XFC3_03685 dd59de563eeab12486c3b6a9901897cb 375 SUPERFAMILY SSF56784 1 149 8.95E-34 T 11-10-2018 IPR036412 HAD-like superfamily XFC3_03685 dd59de563eeab12486c3b6a9901897cb 375 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 375 36.289 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XFC3_03685 dd59de563eeab12486c3b6a9901897cb 375 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XFC3_03685 dd59de563eeab12486c3b6a9901897cb 375 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 143 5.2E-34 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 XFC3_03685 dd59de563eeab12486c3b6a9901897cb 375 Gene3D G3DSA:3.30.230.40 156 256 5.9E-38 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 XFC3_03685 dd59de563eeab12486c3b6a9901897cb 375 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 339 351 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XFC3_03685 dd59de563eeab12486c3b6a9901897cb 375 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 164 1.2E-73 T 11-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 XFC3_00350 8d07614eec451dab480c5e84d923f4ac 435 SUPERFAMILY SSF103473 17 427 6.41E-62 T 11-10-2018 IPR036259 MFS transporter superfamily XFC3_00350 8d07614eec451dab480c5e84d923f4ac 435 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 XFC3_00350 8d07614eec451dab480c5e84d923f4ac 435 Gene3D G3DSA:1.20.1250.20 20 430 2.5E-61 T 11-10-2018 XFC3_00350 8d07614eec451dab480c5e84d923f4ac 435 Pfam PF00083 Sugar (and other) transporter 23 221 6.7E-24 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 XFC3_00350 8d07614eec451dab480c5e84d923f4ac 435 Pfam PF00083 Sugar (and other) transporter 228 420 6.5E-8 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 XFC3_09395 3b4dd3472fe473c77a2f829ef1d9a999 338 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 89 1.3E-20 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 XFC3_09395 3b4dd3472fe473c77a2f829ef1d9a999 338 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 35.035 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 XFC3_09395 3b4dd3472fe473c77a2f829ef1d9a999 338 SUPERFAMILY SSF51161 33 318 9.43E-76 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFC3_09395 3b4dd3472fe473c77a2f829ef1d9a999 338 Gene3D G3DSA:2.160.10.10 98 309 3.4E-60 T 11-10-2018 XFC3_09395 3b4dd3472fe473c77a2f829ef1d9a999 338 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 260 285 0.089 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_09395 3b4dd3472fe473c77a2f829ef1d9a999 338 Gene3D G3DSA:3.40.1390.10 3 97 3.4E-28 T 11-10-2018 XFC3_09395 3b4dd3472fe473c77a2f829ef1d9a999 338 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 140 180 2.3E-5 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_09395 3b4dd3472fe473c77a2f829ef1d9a999 338 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 199 215 0.0026 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_09395 3b4dd3472fe473c77a2f829ef1d9a999 338 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 257 1.9E-6 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_09395 3b4dd3472fe473c77a2f829ef1d9a999 338 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 1.9E-132 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 XFC3_07115 7b6229acedd73e717ff42785cf684994 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_07115 7b6229acedd73e717ff42785cf684994 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 8.0E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_07115 7b6229acedd73e717ff42785cf684994 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 18 142 9.6E-29 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 XFC3_07115 7b6229acedd73e717ff42785cf684994 144 Gene3D G3DSA:3.30.700.10 44 143 1.8E-23 T 11-10-2018 XFC3_07115 7b6229acedd73e717ff42785cf684994 144 SUPERFAMILY SSF54523 46 142 5.23E-26 T 11-10-2018 XFC3_07115 7b6229acedd73e717ff42785cf684994 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 18 43 8.5E-10 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 XFC3_07115 7b6229acedd73e717ff42785cf684994 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 54 72 8.5E-10 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 XFC3_07115 7b6229acedd73e717ff42785cf684994 144 Pfam PF08334 Type II secretion system (T2SS), protein G 41 142 1.2E-29 T 11-10-2018 IPR013545 Type II secretion system protein G XFC3_01090 3b00ebc3b24466137d3665dc0ce9d7e1 249 SMART SM00893 23 211 7.8E-53 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 XFC3_01090 3b00ebc3b24466137d3665dc0ce9d7e1 249 SUPERFAMILY SSF52402 1 242 1.12E-74 T 11-10-2018 XFC3_01090 3b00ebc3b24466137d3665dc0ce9d7e1 249 Pfam PF01012 Electron transfer flavoprotein domain 26 206 4.1E-38 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 XFC3_01090 3b00ebc3b24466137d3665dc0ce9d7e1 249 PIRSF PIRSF000090 1 249 8.7E-80 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 XFC3_01090 3b00ebc3b24466137d3665dc0ce9d7e1 249 Gene3D G3DSA:3.40.50.620 1 248 7.8E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_04235 ec13b5865489b2c9bf1518b878285e6e 276 SUPERFAMILY SSF52540 30 263 2.61E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_04235 ec13b5865489b2c9bf1518b878285e6e 276 SMART SM00382 54 257 6.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_04235 ec13b5865489b2c9bf1518b878285e6e 276 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 30 276 1.3E-118 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 XFC3_04235 ec13b5865489b2c9bf1518b878285e6e 276 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_04235 ec13b5865489b2c9bf1518b878285e6e 276 Pfam PF00005 ABC transporter 45 201 8.1E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_04235 ec13b5865489b2c9bf1518b878285e6e 276 Gene3D G3DSA:3.40.50.300 29 274 1.0E-67 T 11-10-2018 XFC3_11720 6038523dcd171a2afb4bfe04246bc989 586 SUPERFAMILY SSF52540 337 584 4.66E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11720 6038523dcd171a2afb4bfe04246bc989 586 Pfam PF00664 ABC transporter transmembrane region 34 292 4.4E-51 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XFC3_11720 6038523dcd171a2afb4bfe04246bc989 586 Pfam PF00005 ABC transporter 364 513 1.8E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_11720 6038523dcd171a2afb4bfe04246bc989 586 Gene3D G3DSA:1.20.1560.10 9 327 1.2E-75 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XFC3_11720 6038523dcd171a2afb4bfe04246bc989 586 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_11720 6038523dcd171a2afb4bfe04246bc989 586 SMART SM00382 373 559 4.5E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_11720 6038523dcd171a2afb4bfe04246bc989 586 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 12 584 6.2E-276 T 11-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein XFC3_11720 6038523dcd171a2afb4bfe04246bc989 586 Gene3D G3DSA:3.40.50.300 338 585 7.8E-92 T 11-10-2018 XFC3_11720 6038523dcd171a2afb4bfe04246bc989 586 SUPERFAMILY SSF90123 17 326 7.98E-69 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XFC3_01760 9be31739a7c6f2bbb8d587cc6ad22ae1 264 Pfam PF00005 ABC transporter 23 170 2.5E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_01760 9be31739a7c6f2bbb8d587cc6ad22ae1 264 SUPERFAMILY SSF52540 6 234 7.82E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01760 9be31739a7c6f2bbb8d587cc6ad22ae1 264 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_01760 9be31739a7c6f2bbb8d587cc6ad22ae1 264 Gene3D G3DSA:3.40.50.300 2 244 1.6E-58 T 11-10-2018 XFC3_01760 9be31739a7c6f2bbb8d587cc6ad22ae1 264 SMART SM00382 32 247 1.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_00695 0e9ed280d50a302395f8da83947d6678 418 Pfam PF01479 S4 domain 339 377 8.4E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_00695 0e9ed280d50a302395f8da83947d6678 418 SUPERFAMILY SSF55174 333 400 1.09E-14 T 11-10-2018 XFC3_00695 0e9ed280d50a302395f8da83947d6678 418 Gene3D G3DSA:1.10.240.10 218 329 4.7E-24 T 11-10-2018 XFC3_00695 0e9ed280d50a302395f8da83947d6678 418 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 400 44.783 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 XFC3_00695 0e9ed280d50a302395f8da83947d6678 418 Gene3D G3DSA:3.40.50.620 5 217 3.5E-73 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_00695 0e9ed280d50a302395f8da83947d6678 418 Pfam PF00579 tRNA synthetases class I (W and Y) 31 315 3.2E-69 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_00695 0e9ed280d50a302395f8da83947d6678 418 SUPERFAMILY SSF52374 8 316 8.67E-88 T 11-10-2018 XFC3_00695 0e9ed280d50a302395f8da83947d6678 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 9 399 7.0E-109 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XFC3_00695 0e9ed280d50a302395f8da83947d6678 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 6.0E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XFC3_00695 0e9ed280d50a302395f8da83947d6678 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 6.0E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XFC3_00695 0e9ed280d50a302395f8da83947d6678 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 6.0E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XFC3_00695 0e9ed280d50a302395f8da83947d6678 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 6.0E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XFC3_00695 0e9ed280d50a302395f8da83947d6678 418 Gene3D G3DSA:3.10.290.10 330 400 6.5E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XFC3_00695 0e9ed280d50a302395f8da83947d6678 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_03575 f47ff01d453fc69e7f26c381019f005a 206 SUPERFAMILY SSF88946 11 110 9.73E-27 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XFC3_03575 f47ff01d453fc69e7f26c381019f005a 206 Gene3D G3DSA:1.10.10.10 126 194 9.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_03575 f47ff01d453fc69e7f26c381019f005a 206 Gene3D G3DSA:1.10.1740.10 3 125 5.5E-35 T 11-10-2018 XFC3_03575 f47ff01d453fc69e7f26c381019f005a 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 186 8.1E-30 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XFC3_03575 f47ff01d453fc69e7f26c381019f005a 206 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 6 194 2.0E-91 T 11-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XFC3_03575 f47ff01d453fc69e7f26c381019f005a 206 SUPERFAMILY SSF88659 127 186 8.29E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XFC3_03575 f47ff01d453fc69e7f26c381019f005a 206 Pfam PF08281 Sigma-70, region 4 134 185 1.5E-17 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XFC3_03575 f47ff01d453fc69e7f26c381019f005a 206 Pfam PF04542 Sigma-70 region 2 29 96 2.3E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XFC3_00675 d21dc6e7b15db1e61166a26adc8f96e3 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 263 7.1E-69 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 XFC3_00675 d21dc6e7b15db1e61166a26adc8f96e3 266 SUPERFAMILY SSF56219 1 264 9.16E-72 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XFC3_00675 d21dc6e7b15db1e61166a26adc8f96e3 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 257 1.9E-14 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase XFC3_00675 d21dc6e7b15db1e61166a26adc8f96e3 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 263 3.9E-62 T 11-10-2018 XFC3_00675 d21dc6e7b15db1e61166a26adc8f96e3 266 Gene3D G3DSA:3.60.10.10 1 265 3.6E-77 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XFC3_08985 114c3cafce5c686aeecba8df93166db8 515 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 384 509 8.9E-46 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08985 114c3cafce5c686aeecba8df93166db8 515 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 512 1.1E-246 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08985 114c3cafce5c686aeecba8df93166db8 515 SUPERFAMILY SSF50615 12 96 4.12E-26 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFC3_08985 114c3cafce5c686aeecba8df93166db8 515 Gene3D G3DSA:3.40.50.300 96 384 2.6E-129 T 11-10-2018 XFC3_08985 114c3cafce5c686aeecba8df93166db8 515 Gene3D G3DSA:1.20.150.20 385 515 1.4E-47 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08985 114c3cafce5c686aeecba8df93166db8 515 SUPERFAMILY SSF52540 98 383 2.92E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08985 114c3cafce5c686aeecba8df93166db8 515 SUPERFAMILY SSF47917 385 512 1.83E-46 T 11-10-2018 XFC3_08985 114c3cafce5c686aeecba8df93166db8 515 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 377 6.4E-73 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFC3_08985 114c3cafce5c686aeecba8df93166db8 515 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 94 1.0E-12 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFC3_08985 114c3cafce5c686aeecba8df93166db8 515 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFC3_08985 114c3cafce5c686aeecba8df93166db8 515 Gene3D G3DSA:2.40.30.20 3 95 1.9E-30 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFC3_08985 114c3cafce5c686aeecba8df93166db8 515 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 514 49.393 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_00450 993749132fb0993d36db869ecfc8fa12 261 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 261 102.929 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XFC3_00450 993749132fb0993d36db869ecfc8fa12 261 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 229 2.3E-82 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XFC3_00450 993749132fb0993d36db869ecfc8fa12 261 Gene3D G3DSA:3.40.1280.10 1 165 3.8E-60 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XFC3_00450 993749132fb0993d36db869ecfc8fa12 261 Gene3D G3DSA:1.10.1270.20 166 257 1.5E-27 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XFC3_00450 993749132fb0993d36db869ecfc8fa12 261 SUPERFAMILY SSF75217 1 249 2.81E-93 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases XFC3_00450 993749132fb0993d36db869ecfc8fa12 261 PIRSF PIRSF000386 1 256 8.1E-89 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XFC3_00450 993749132fb0993d36db869ecfc8fa12 261 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 4.9E-53 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XFC3_12515 1c4e342625540637f26f43ebef21474f 130 SUPERFAMILY SSF160472 10 122 2.09E-35 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_12515 1c4e342625540637f26f43ebef21474f 130 Gene3D G3DSA:1.10.3510.10 2 127 9.7E-14 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_12515 1c4e342625540637f26f43ebef21474f 130 Pfam PF04591 Protein of unknown function, DUF596 58 129 7.9E-24 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFC3_03845 1c4e342625540637f26f43ebef21474f 130 SUPERFAMILY SSF160472 10 122 2.09E-35 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_03845 1c4e342625540637f26f43ebef21474f 130 Gene3D G3DSA:1.10.3510.10 2 127 9.7E-14 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_03845 1c4e342625540637f26f43ebef21474f 130 Pfam PF04591 Protein of unknown function, DUF596 58 129 7.9E-24 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 SUPERFAMILY SSF109604 25 211 3.45E-69 T 11-10-2018 XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 Gene3D G3DSA:3.10.20.30 401 474 8.2E-28 T 11-10-2018 IPR012675 Beta-grasp domain superfamily XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 Gene3D G3DSA:1.10.3210.10 25 210 5.9E-73 T 11-10-2018 XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 SMART SM00471 61 173 4.1E-11 T 11-10-2018 IPR003607 HD/PDEase domain XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 SMART SM00954 255 365 3.2E-56 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 SUPERFAMILY SSF81301 201 412 1.32E-57 T 11-10-2018 XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 Pfam PF04607 Region found in RelA / SpoT proteins 255 364 2.1E-33 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 Gene3D G3DSA:3.30.70.260 646 723 8.1E-14 T 11-10-2018 XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 Pfam PF13328 HD domain 47 195 2.2E-49 T 11-10-2018 IPR003607 HD/PDEase domain XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 Pfam PF13291 ACT domain 646 722 1.7E-18 T 11-10-2018 IPR002912 ACT domain XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 48 721 1.6E-224 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 Gene3D G3DSA:3.30.460.10 214 345 1.7E-41 T 11-10-2018 XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 SUPERFAMILY SSF81271 395 467 8.67E-20 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 Pfam PF02824 TGS domain 408 467 7.0E-17 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 XFC3_01495 617aed489d69e03fd7c0d21db688e652 723 SUPERFAMILY SSF55021 651 722 1.22E-8 T 11-10-2018 XFC3_07105 5da75da0be8d6583576f71cee00ca517 132 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.0E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_07105 5da75da0be8d6583576f71cee00ca517 132 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_07105 5da75da0be8d6583576f71cee00ca517 132 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 6.7E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_03690 4694bb54c2481ab9e0fbf1026b436eb5 200 PIRSF PIRSF000495 2 200 2.8E-62 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 XFC3_03690 4694bb54c2481ab9e0fbf1026b436eb5 200 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 197 32.815 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 XFC3_03690 4694bb54c2481ab9e0fbf1026b436eb5 200 PRINTS PR00097 Anthranilate synthase component II signature 73 84 6.3E-5 T 11-10-2018 XFC3_03690 4694bb54c2481ab9e0fbf1026b436eb5 200 PRINTS PR00097 Anthranilate synthase component II signature 42 51 6.3E-5 T 11-10-2018 XFC3_03690 4694bb54c2481ab9e0fbf1026b436eb5 200 PRINTS PR00097 Anthranilate synthase component II signature 175 188 6.3E-5 T 11-10-2018 XFC3_03690 4694bb54c2481ab9e0fbf1026b436eb5 200 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 197 3.1E-68 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 XFC3_03690 4694bb54c2481ab9e0fbf1026b436eb5 200 Pfam PF00117 Glutamine amidotransferase class-I 6 195 2.0E-17 T 11-10-2018 IPR017926 Glutamine amidotransferase XFC3_03690 4694bb54c2481ab9e0fbf1026b436eb5 200 Gene3D G3DSA:3.40.50.880 1 200 2.3E-62 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_03690 4694bb54c2481ab9e0fbf1026b436eb5 200 SUPERFAMILY SSF52317 4 197 2.37E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_10160 f097839995f542223e2b73e10634c9f4 92 Pfam PF08774 VRR-NUC domain 31 82 1.0E-7 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFC3_10160 f097839995f542223e2b73e10634c9f4 92 SMART SM00990 5 85 2.8E-18 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFC3_10160 f097839995f542223e2b73e10634c9f4 92 Gene3D G3DSA:3.40.1350.10 5 92 1.1E-30 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XFC3_09875 f097839995f542223e2b73e10634c9f4 92 Pfam PF08774 VRR-NUC domain 31 82 1.0E-7 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFC3_09875 f097839995f542223e2b73e10634c9f4 92 SMART SM00990 5 85 2.8E-18 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFC3_09875 f097839995f542223e2b73e10634c9f4 92 Gene3D G3DSA:3.40.1350.10 5 92 1.1E-30 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XFC3_05120 00aba33338d6f8f6f0b746ef9686ff64 262 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 211 222 - T 11-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 XFC3_05120 00aba33338d6f8f6f0b746ef9686ff64 262 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 254 8.1E-79 T 11-10-2018 XFC3_05120 00aba33338d6f8f6f0b746ef9686ff64 262 Gene3D G3DSA:3.60.10.10 1 255 4.3E-69 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XFC3_05120 00aba33338d6f8f6f0b746ef9686ff64 262 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 XFC3_05120 00aba33338d6f8f6f0b746ef9686ff64 262 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 254 8.5E-76 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 XFC3_05120 00aba33338d6f8f6f0b746ef9686ff64 262 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 247 1.8E-21 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase XFC3_05120 00aba33338d6f8f6f0b746ef9686ff64 262 SUPERFAMILY SSF56219 1 255 2.49E-77 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XFC3_01550 31e4c84bfef930c6d67b70276f7c1c3d 809 Pfam PF00912 Transglycosylase 67 235 1.8E-57 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_01550 31e4c84bfef930c6d67b70276f7c1c3d 809 Pfam PF17092 Penicillin-binding protein OB-like domain 322 419 2.4E-14 T 11-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_01550 31e4c84bfef930c6d67b70276f7c1c3d 809 Pfam PF00905 Penicillin binding protein transpeptidase domain 424 604 5.7E-25 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XFC3_01550 31e4c84bfef930c6d67b70276f7c1c3d 809 SUPERFAMILY SSF56601 216 788 5.98E-118 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFC3_01550 31e4c84bfef930c6d67b70276f7c1c3d 809 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 69 756 9.2E-176 T 11-10-2018 XFC3_01550 31e4c84bfef930c6d67b70276f7c1c3d 809 Gene3D G3DSA:1.10.3810.10 52 249 5.8E-69 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_01550 31e4c84bfef930c6d67b70276f7c1c3d 809 SUPERFAMILY SSF53955 47 263 5.34E-70 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 184 1.5E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 16 814 95.153 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 16 814 2.2E-292 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR00418 DNA topoisomerase II family signature 431 445 1.6E-70 T 11-10-2018 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR00418 DNA topoisomerase II family signature 46 61 1.6E-70 T 11-10-2018 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR00418 DNA topoisomerase II family signature 279 292 1.6E-70 T 11-10-2018 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR00418 DNA topoisomerase II family signature 498 514 1.6E-70 T 11-10-2018 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR00418 DNA topoisomerase II family signature 81 94 1.6E-70 T 11-10-2018 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR00418 DNA topoisomerase II family signature 536 548 1.6E-70 T 11-10-2018 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR00418 DNA topoisomerase II family signature 516 533 1.6E-70 T 11-10-2018 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR00418 DNA topoisomerase II family signature 124 138 1.6E-70 T 11-10-2018 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR00418 DNA topoisomerase II family signature 746 762 1.6E-70 T 11-10-2018 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 Gene3D G3DSA:3.30.230.10 232 403 1.7E-69 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 SMART SM00387 42 186 4.0E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 Gene3D G3DSA:3.40.50.670 409 578 5.0E-71 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 SUPERFAMILY SSF55874 16 221 1.24E-68 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 SMART SM00433 46 807 3.6E-254 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 Pfam PF01751 Toprim domain 430 539 5.9E-18 T 11-10-2018 IPR006171 TOPRIM domain XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 Pfam PF00204 DNA gyrase B 232 401 2.3E-57 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR01159 DNA gyrase subunit B signature 191 206 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR01159 DNA gyrase subunit B signature 16 26 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR01159 DNA gyrase subunit B signature 231 253 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR01159 DNA gyrase subunit B signature 371 385 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR01159 DNA gyrase subunit B signature 323 339 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR01159 DNA gyrase subunit B signature 206 219 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR01159 DNA gyrase subunit B signature 385 405 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR01159 DNA gyrase subunit B signature 767 779 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR01159 DNA gyrase subunit B signature 481 490 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 PRINTS PR01159 DNA gyrase subunit B signature 783 799 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 ProSitePatterns PS00177 DNA topoisomerase II signature. 433 441 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 Gene3D G3DSA:3.30.565.10 14 231 6.0E-87 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 SUPERFAMILY SSF56719 405 806 4.18E-83 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 SUPERFAMILY SSF54211 232 402 1.84E-54 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 Gene3D G3DSA:3.40.50.670 694 812 8.0E-24 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFC3_00025 ea5a892d37695d1807b720e20f8c4d5c 814 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 742 803 3.6E-28 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFC3_07650 6c7b10b0b5e5d091c56f645e1a302ffb 356 SUPERFAMILY SSF53822 64 341 4.52E-62 T 11-10-2018 IPR028082 Periplasmic binding protein-like I XFC3_07650 6c7b10b0b5e5d091c56f645e1a302ffb 356 Gene3D G3DSA:3.40.50.2300 165 294 2.5E-64 T 11-10-2018 XFC3_07650 6c7b10b0b5e5d091c56f645e1a302ffb 356 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 4.9E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XFC3_07650 6c7b10b0b5e5d091c56f645e1a302ffb 356 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 4.9E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XFC3_07650 6c7b10b0b5e5d091c56f645e1a302ffb 356 Gene3D G3DSA:3.40.50.2300 57 311 2.5E-64 T 11-10-2018 XFC3_07650 6c7b10b0b5e5d091c56f645e1a302ffb 356 SMART SM00354 3 73 1.7E-22 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XFC3_07650 6c7b10b0b5e5d091c56f645e1a302ffb 356 Pfam PF13377 Periplasmic binding protein-like domain 173 339 1.1E-35 T 11-10-2018 XFC3_07650 6c7b10b0b5e5d091c56f645e1a302ffb 356 SUPERFAMILY SSF47413 2 58 2.25E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_07650 6c7b10b0b5e5d091c56f645e1a302ffb 356 Gene3D G3DSA:1.10.260.40 1 56 4.5E-22 T 11-10-2018 XFC3_07650 6c7b10b0b5e5d091c56f645e1a302ffb 356 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 11-10-2018 XFC3_07650 6c7b10b0b5e5d091c56f645e1a302ffb 356 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 2.0E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XFC3_08270 452766c2d8a291643c0ec5d0e2918e9a 718 Gene3D G3DSA:1.10.3210.10 50 197 9.1E-21 T 11-10-2018 XFC3_08270 452766c2d8a291643c0ec5d0e2918e9a 718 SMART SM00954 241 351 2.1E-66 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 XFC3_08270 452766c2d8a291643c0ec5d0e2918e9a 718 Gene3D G3DSA:3.30.460.10 199 331 5.6E-48 T 11-10-2018 XFC3_08270 452766c2d8a291643c0ec5d0e2918e9a 718 Pfam PF13328 HD domain 49 182 4.8E-16 T 11-10-2018 IPR003607 HD/PDEase domain XFC3_08270 452766c2d8a291643c0ec5d0e2918e9a 718 Pfam PF13291 ACT domain 639 716 2.8E-14 T 11-10-2018 IPR002912 ACT domain XFC3_08270 452766c2d8a291643c0ec5d0e2918e9a 718 Pfam PF04607 Region found in RelA / SpoT proteins 241 351 3.6E-37 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 XFC3_08270 452766c2d8a291643c0ec5d0e2918e9a 718 SUPERFAMILY SSF81301 199 370 4.9E-62 T 11-10-2018 XFC3_08270 452766c2d8a291643c0ec5d0e2918e9a 718 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 120 715 3.7E-158 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 XFC3_08270 452766c2d8a291643c0ec5d0e2918e9a 718 SUPERFAMILY SSF109604 23 197 6.28E-24 T 11-10-2018 XFC3_08270 452766c2d8a291643c0ec5d0e2918e9a 718 SUPERFAMILY SSF55021 641 716 2.75E-7 T 11-10-2018 XFC3_08270 452766c2d8a291643c0ec5d0e2918e9a 718 Gene3D G3DSA:3.30.70.260 639 718 5.9E-10 T 11-10-2018 XFC3_08270 452766c2d8a291643c0ec5d0e2918e9a 718 Gene3D G3DSA:3.10.20.30 386 462 2.8E-30 T 11-10-2018 IPR012675 Beta-grasp domain superfamily XFC3_08270 452766c2d8a291643c0ec5d0e2918e9a 718 SUPERFAMILY SSF81271 387 452 2.03E-19 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XFC3_08270 452766c2d8a291643c0ec5d0e2918e9a 718 Pfam PF02824 TGS domain 394 452 5.0E-20 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 XFC3_03500 49529ba358db9107d2dc4e9f0e4bed95 525 SUPERFAMILY SSF50998 271 384 1.79E-16 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XFC3_03500 49529ba358db9107d2dc4e9f0e4bed95 525 Gene3D G3DSA:2.40.128.630 287 394 1.3E-15 T 11-10-2018 XFC3_03500 49529ba358db9107d2dc4e9f0e4bed95 525 Gene3D G3DSA:2.130.10.10 1 286 1.5E-37 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 XFC3_03500 49529ba358db9107d2dc4e9f0e4bed95 525 SMART SM00564 62 94 0.13 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFC3_03500 49529ba358db9107d2dc4e9f0e4bed95 525 SMART SM00564 223 254 600.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFC3_03500 49529ba358db9107d2dc4e9f0e4bed95 525 SMART SM00564 256 307 0.6 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFC3_03500 49529ba358db9107d2dc4e9f0e4bed95 525 SMART SM00564 155 198 760.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFC3_03500 49529ba358db9107d2dc4e9f0e4bed95 525 SMART SM00564 107 142 12.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFC3_03500 49529ba358db9107d2dc4e9f0e4bed95 525 SMART SM00564 15 46 0.032 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFC3_03500 49529ba358db9107d2dc4e9f0e4bed95 525 SMART SM00564 324 355 0.094 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFC3_03500 49529ba358db9107d2dc4e9f0e4bed95 525 SUPERFAMILY SSF50998 2 281 7.74E-38 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XFC3_03500 49529ba358db9107d2dc4e9f0e4bed95 525 Pfam PF13360 PQQ-like domain 291 386 8.0E-11 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat XFC3_03500 49529ba358db9107d2dc4e9f0e4bed95 525 Pfam PF13360 PQQ-like domain 3 157 3.7E-17 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat XFC3_08980 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.6E-18 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08980 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 133 148 1.6E-18 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08980 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 72 83 1.6E-18 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08980 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 148 166 1.6E-18 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08980 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 83 97 1.6E-18 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08980 c7c0ad048e3edd0a70bd98e7ef724338 175 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 173 2.4E-43 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08980 c7c0ad048e3edd0a70bd98e7ef724338 175 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 173 3.7E-34 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08980 c7c0ad048e3edd0a70bd98e7ef724338 175 Gene3D G3DSA:1.10.520.20 2 104 3.3E-21 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08980 c7c0ad048e3edd0a70bd98e7ef724338 175 SUPERFAMILY SSF47928 3 103 2.35E-19 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08980 c7c0ad048e3edd0a70bd98e7ef724338 175 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 175 17.241 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08300 65b0e40db64fed91fa8a0755163ea79e 347 Pfam PF06723 MreB/Mbl protein 11 339 2.0E-150 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XFC3_08300 65b0e40db64fed91fa8a0755163ea79e 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 8.7E-160 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XFC3_08300 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 4.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XFC3_08300 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 4.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XFC3_08300 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 4.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XFC3_08300 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 4.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XFC3_08300 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 4.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XFC3_08300 65b0e40db64fed91fa8a0755163ea79e 347 SUPERFAMILY SSF53067 9 153 2.07E-38 T 11-10-2018 XFC3_08300 65b0e40db64fed91fa8a0755163ea79e 347 Gene3D G3DSA:3.90.640.10 191 264 8.7E-130 T 11-10-2018 XFC3_08300 65b0e40db64fed91fa8a0755163ea79e 347 SUPERFAMILY SSF53067 155 340 5.81E-48 T 11-10-2018 XFC3_08300 65b0e40db64fed91fa8a0755163ea79e 347 Gene3D G3DSA:3.30.420.40 14 332 8.7E-130 T 11-10-2018 XFC3_08300 65b0e40db64fed91fa8a0755163ea79e 347 Gene3D G3DSA:3.30.420.40 159 322 8.7E-130 T 11-10-2018 XFC3_08300 65b0e40db64fed91fa8a0755163ea79e 347 SMART SM00268 10 345 0.0086 T 11-10-2018 IPR004000 Actin family XFC3_07990 2899869c51ce8610383c4d1d910f47bd 491 Gene3D G3DSA:3.40.50.1820 153 368 4.7E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_07990 2899869c51ce8610383c4d1d910f47bd 491 Pfam PF10142 PhoPQ-activated pathogenicity-related protein 42 415 1.3E-138 T 11-10-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type XFC3_07990 2899869c51ce8610383c4d1d910f47bd 491 PIRSF PIRSF014728 1 491 3.6E-254 T 11-10-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type XFC3_07990 2899869c51ce8610383c4d1d910f47bd 491 SUPERFAMILY SSF53474 203 367 2.94E-10 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 203 219 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 45 60 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 148 172 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 242 263 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 133 145 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 12 34 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 111 119 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 12 317 1.1E-118 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 1.3E-39 T 11-10-2018 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 1.3E-39 T 11-10-2018 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.3E-39 T 11-10-2018 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 1.3E-39 T 11-10-2018 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 256 1.3E-39 T 11-10-2018 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 301 3.0E-45 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 140 160 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 SUPERFAMILY SSF51905 5 317 6.29E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 Gene3D G3DSA:3.50.50.60 14 316 7.0E-121 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_07720 5b393aeaf178653b3bd7c1d545c5990b 321 Gene3D G3DSA:3.50.50.60 122 248 7.0E-121 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_12270 91290da1395a6a9e9f9581be5d8c3c99 1007 Gene3D G3DSA:3.40.50.300 488 754 4.9E-93 T 11-10-2018 XFC3_12270 91290da1395a6a9e9f9581be5d8c3c99 1007 Gene3D G3DSA:3.90.640.50 63 135 1.5E-98 T 11-10-2018 XFC3_12270 91290da1395a6a9e9f9581be5d8c3c99 1007 Gene3D G3DSA:1.20.58.2040 755 858 2.5E-28 T 11-10-2018 XFC3_12270 91290da1395a6a9e9f9581be5d8c3c99 1007 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 751 1003 6.4E-71 T 11-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal XFC3_12270 91290da1395a6a9e9f9581be5d8c3c99 1007 SUPERFAMILY SSF52540 425 714 5.05E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_12270 91290da1395a6a9e9f9581be5d8c3c99 1007 SMART SM00487 289 490 3.7E-20 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_12270 91290da1395a6a9e9f9581be5d8c3c99 1007 Gene3D G3DSA:3.40.50.300 292 487 4.4E-66 T 11-10-2018 XFC3_12270 91290da1395a6a9e9f9581be5d8c3c99 1007 Gene3D G3DSA:3.90.1570.50 37 285 1.5E-98 T 11-10-2018 XFC3_12270 91290da1395a6a9e9f9581be5d8c3c99 1007 SUPERFAMILY SSF52540 249 460 1.38E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_12270 91290da1395a6a9e9f9581be5d8c3c99 1007 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 38 224 1.7E-45 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 XFC3_12270 91290da1395a6a9e9f9581be5d8c3c99 1007 Pfam PF04851 Type III restriction enzyme, res subunit 292 460 9.5E-33 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XFC3_12270 91290da1395a6a9e9f9581be5d8c3c99 1007 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 45 748 2.6E-169 T 11-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 XFC3_10460 3d58f82eb16b90a8859cff49dd55038a 161 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 152 7.3E-36 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 XFC3_10460 3d58f82eb16b90a8859cff49dd55038a 161 SUPERFAMILY SSF55486 23 157 3.66E-43 T 11-10-2018 XFC3_10460 3d58f82eb16b90a8859cff49dd55038a 161 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 7 155 23.316 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 XFC3_10460 3d58f82eb16b90a8859cff49dd55038a 161 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site XFC3_10460 3d58f82eb16b90a8859cff49dd55038a 161 Gene3D G3DSA:3.40.390.30 6 161 3.2E-48 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 XFC3_10460 3d58f82eb16b90a8859cff49dd55038a 161 Pfam PF02130 Uncharacterized protein family UPF0054 27 151 1.7E-34 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 XFC3_12085 72a33d858858a018cc8bc7ac4cb1d347 721 SUPERFAMILY SSF49503 574 710 1.26E-14 T 11-10-2018 IPR008972 Cupredoxin XFC3_12085 72a33d858858a018cc8bc7ac4cb1d347 721 Gene3D G3DSA:2.60.40.420 559 720 4.6E-29 T 11-10-2018 IPR008972 Cupredoxin XFC3_12085 72a33d858858a018cc8bc7ac4cb1d347 721 Pfam PF07732 Multicopper oxidase 114 162 1.0E-4 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 XFC3_12085 72a33d858858a018cc8bc7ac4cb1d347 721 Pfam PF07732 Multicopper oxidase 174 246 9.9E-11 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 XFC3_12085 72a33d858858a018cc8bc7ac4cb1d347 721 SUPERFAMILY SSF49503 312 445 3.23E-9 T 11-10-2018 IPR008972 Cupredoxin XFC3_12085 72a33d858858a018cc8bc7ac4cb1d347 721 ProSitePatterns PS00079 Multicopper oxidases signature 1. 690 710 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site XFC3_12085 72a33d858858a018cc8bc7ac4cb1d347 721 SUPERFAMILY SSF49503 73 247 1.9E-21 T 11-10-2018 IPR008972 Cupredoxin XFC3_12085 72a33d858858a018cc8bc7ac4cb1d347 721 Gene3D G3DSA:2.60.40.420 95 243 1.4E-30 T 11-10-2018 IPR008972 Cupredoxin XFC3_12085 72a33d858858a018cc8bc7ac4cb1d347 721 Gene3D G3DSA:2.60.40.420 264 473 2.1E-14 T 11-10-2018 IPR008972 Cupredoxin XFC3_12085 72a33d858858a018cc8bc7ac4cb1d347 721 Pfam PF07731 Multicopper oxidase 581 712 2.2E-13 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 XFC3_12085 72a33d858858a018cc8bc7ac4cb1d347 721 ProSitePatterns PS00080 Multicopper oxidases signature 2. 695 706 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 XFC3_02745 b4d1fd927bded3f6340a977cd594be2c 346 Gene3D G3DSA:3.75.10.10 5 346 3.0E-113 T 11-10-2018 XFC3_02745 b4d1fd927bded3f6340a977cd594be2c 346 SUPERFAMILY SSF55909 4 341 1.41E-112 T 11-10-2018 XFC3_02745 b4d1fd927bded3f6340a977cd594be2c 346 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 7 340 1.8E-107 T 11-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 XFC3_06920 7821bec7e84272c4501f24b475325f9b 232 SUPERFAMILY SSF57938 147 186 9.68E-5 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily XFC3_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 310 1.5E-111 T 11-10-2018 IPR017861 Kae1/TsaD family XFC3_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 Pfam PF00814 Glycoprotease family 29 311 2.1E-99 T 11-10-2018 IPR000905 Gcp-like domain XFC3_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 6.3E-129 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 XFC3_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 Gene3D G3DSA:3.30.420.40 133 297 1.0E-122 T 11-10-2018 XFC3_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 Gene3D G3DSA:3.30.420.40 3 319 1.0E-122 T 11-10-2018 XFC3_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 SUPERFAMILY SSF53067 3 127 1.75E-29 T 11-10-2018 XFC3_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 62.553 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 XFC3_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 SUPERFAMILY SSF53067 105 313 7.77E-38 T 11-10-2018 XFC3_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 4.5E-52 T 11-10-2018 IPR017861 Kae1/TsaD family XFC3_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 4.5E-52 T 11-10-2018 IPR017861 Kae1/TsaD family XFC3_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 4.5E-52 T 11-10-2018 IPR017861 Kae1/TsaD family XFC3_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 179 4.5E-52 T 11-10-2018 IPR017861 Kae1/TsaD family XFC3_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 135 147 4.5E-52 T 11-10-2018 IPR017861 Kae1/TsaD family XFC3_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 4.5E-52 T 11-10-2018 IPR017861 Kae1/TsaD family XFC3_12110 98fe3f5286f7cb62578e87edfaaf5188 453 Pfam PF01554 MatE 23 181 1.1E-20 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XFC3_12110 98fe3f5286f7cb62578e87edfaaf5188 453 Pfam PF01554 MatE 249 408 2.6E-28 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XFC3_12110 98fe3f5286f7cb62578e87edfaaf5188 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 423 3.0E-77 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XFC3_06905 2971e0897e54b1d5adb251879fe09d4d 165 SUPERFAMILY SSF53955 5 149 1.02E-48 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_06905 2971e0897e54b1d5adb251879fe09d4d 165 Gene3D G3DSA:1.10.530.40 3 151 2.3E-52 T 11-10-2018 XFC3_06905 2971e0897e54b1d5adb251879fe09d4d 165 Pfam PF00959 Phage lysozyme 30 137 7.3E-22 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XFC3_05720 2971e0897e54b1d5adb251879fe09d4d 165 SUPERFAMILY SSF53955 5 149 1.02E-48 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_05720 2971e0897e54b1d5adb251879fe09d4d 165 Gene3D G3DSA:1.10.530.40 3 151 2.3E-52 T 11-10-2018 XFC3_05720 2971e0897e54b1d5adb251879fe09d4d 165 Pfam PF00959 Phage lysozyme 30 137 7.3E-22 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XFC3_07580 3f8411ae6b84fdd8d48abcfafb176c1c 717 SUPERFAMILY SSF50993 24 446 1.65E-75 T 11-10-2018 XFC3_07580 3f8411ae6b84fdd8d48abcfafb176c1c 717 Gene3D G3DSA:2.130.10.120 96 443 2.4E-249 T 11-10-2018 XFC3_07580 3f8411ae6b84fdd8d48abcfafb176c1c 717 Gene3D G3DSA:3.40.50.1820 45 710 2.4E-249 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_07580 3f8411ae6b84fdd8d48abcfafb176c1c 717 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 26 442 5.8E-105 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 XFC3_07580 3f8411ae6b84fdd8d48abcfafb176c1c 717 Pfam PF00326 Prolyl oligopeptidase family 501 715 1.4E-66 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 XFC3_07580 3f8411ae6b84fdd8d48abcfafb176c1c 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 568 588 2.5E-45 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XFC3_07580 3f8411ae6b84fdd8d48abcfafb176c1c 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 510 534 2.5E-45 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XFC3_07580 3f8411ae6b84fdd8d48abcfafb176c1c 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 626 641 2.5E-45 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XFC3_07580 3f8411ae6b84fdd8d48abcfafb176c1c 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 644 666 2.5E-45 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XFC3_07580 3f8411ae6b84fdd8d48abcfafb176c1c 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 484 502 2.5E-45 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XFC3_07580 3f8411ae6b84fdd8d48abcfafb176c1c 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 557 2.5E-45 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XFC3_07580 3f8411ae6b84fdd8d48abcfafb176c1c 717 SUPERFAMILY SSF53474 452 714 1.06E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_09410 b4c7561f2d08948457721daed09030d0 385 SUPERFAMILY SSF53756 6 382 1.96E-31 T 11-10-2018 XFC3_09410 b4c7561f2d08948457721daed09030d0 385 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 383 42.793 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XFC3_09410 b4c7561f2d08948457721daed09030d0 385 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 2 381 4.7E-112 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XFC3_09410 b4c7561f2d08948457721daed09030d0 385 Pfam PF02684 Lipid-A-disaccharide synthetase 7 378 5.9E-111 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 11 468 5.9E-205 T 11-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 Pfam PF00072 Response regulator receiver domain 11 118 1.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 453 473 5.3E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 453 5.3E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 SMART SM00448 9 124 7.5E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 SMART SM00382 167 310 1.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 Pfam PF02954 Bacterial regulatory protein, Fis family 434 467 1.8E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 Gene3D G3DSA:3.40.50.2300 6 132 4.4E-32 T 11-10-2018 XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 SUPERFAMILY SSF52172 8 191 6.97E-38 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 Pfam PF00158 Sigma-54 interaction domain 147 313 4.1E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 Gene3D G3DSA:3.40.50.300 140 317 1.2E-62 T 11-10-2018 XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 Gene3D G3DSA:1.10.8.60 318 391 1.7E-21 T 11-10-2018 XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 SUPERFAMILY SSF52540 147 391 2.88E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 Gene3D G3DSA:1.10.10.60 392 470 9.5E-16 T 11-10-2018 XFC3_05900 cd3696e20bcd8d6b82233e42e2c0dacc 475 SUPERFAMILY SSF46689 402 467 7.17E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFC3_08090 84fa955aa89484f0e5d476256d69dc4d 278 SUPERFAMILY SSF56281 3 268 1.57E-33 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFC3_08090 84fa955aa89484f0e5d476256d69dc4d 278 Pfam PF00753 Metallo-beta-lactamase superfamily 42 263 1.9E-42 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFC3_08090 84fa955aa89484f0e5d476256d69dc4d 278 SMART SM00849 44 263 7.3E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFC3_08090 84fa955aa89484f0e5d476256d69dc4d 278 Gene3D G3DSA:3.60.15.10 2 275 5.7E-51 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 Pfam PF08676 MutL C terminal dimerisation domain 428 575 6.2E-48 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 615 28.833 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 307 2.7E-95 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 SUPERFAMILY SSF54211 190 327 1.78E-36 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 SUPERFAMILY SSF55874 1 204 2.23E-52 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 SMART SM00853 432 575 3.9E-54 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 210 326 2.1E-40 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 Gene3D G3DSA:2.30.42.20 434 612 4.2E-56 T 11-10-2018 XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 SMART SM01340 209 327 6.5E-57 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 Gene3D G3DSA:3.30.565.10 1 202 7.0E-65 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 Gene3D G3DSA:3.30.1370.100 475 570 4.2E-56 T 11-10-2018 XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 Gene3D G3DSA:3.30.230.10 214 326 4.1E-39 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 SUPERFAMILY SSF118116 428 617 8.5E-58 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily XFC3_11105 31d49568360ecbd1c4c4bdc6d4bd4b93 619 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 115 7.1E-11 T 11-10-2018 XFC3_06635 892871cae9a9aa1ce7f2aa92add0f3fa 376 Gene3D G3DSA:3.40.50.300 105 359 3.3E-86 T 11-10-2018 XFC3_06635 892871cae9a9aa1ce7f2aa92add0f3fa 376 Gene3D G3DSA:3.30.450.90 2 102 1.7E-31 T 11-10-2018 XFC3_06635 892871cae9a9aa1ce7f2aa92add0f3fa 376 Pfam PF00437 Type II/IV secretion system protein 38 271 7.3E-35 T 11-10-2018 IPR001482 Type II/IV secretion system protein XFC3_06635 892871cae9a9aa1ce7f2aa92add0f3fa 376 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 347 1.8E-133 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 XFC3_06635 892871cae9a9aa1ce7f2aa92add0f3fa 376 SUPERFAMILY SSF52540 8 341 7.72E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_04690 5cd6dd38b068d10eb1ab0c891500cb56 458 Gene3D G3DSA:3.30.559.10 238 448 3.5E-11 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XFC3_04690 5cd6dd38b068d10eb1ab0c891500cb56 458 Gene3D G3DSA:3.30.559.10 5 196 1.5E-13 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XFC3_04690 5cd6dd38b068d10eb1ab0c891500cb56 458 SUPERFAMILY SSF52777 11 177 2.78E-6 T 11-10-2018 XFC3_03345 7943b9f14042f390f2d10ca3f575e60f 257 Pfam PF02348 Cytidylyltransferase 10 228 1.9E-44 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 XFC3_03345 7943b9f14042f390f2d10ca3f575e60f 257 SUPERFAMILY SSF53448 8 253 1.67E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_03345 7943b9f14042f390f2d10ca3f575e60f 257 Gene3D G3DSA:3.90.550.10 6 255 2.2E-81 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_03345 7943b9f14042f390f2d10ca3f575e60f 257 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 8 247 1.7E-75 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 XFC3_03345 7943b9f14042f390f2d10ca3f575e60f 257 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 6 255 37.864 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 TIGRFAM TIGR00838 argH: argininosuccinate lyase 24 398 1.8E-86 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 6.5E-14 T 11-10-2018 IPR000362 Fumarate lyase family XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00149 Fumarate lyase superfamily signature 150 168 6.5E-14 T 11-10-2018 IPR000362 Fumarate lyase family XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00149 Fumarate lyase superfamily signature 105 123 6.5E-14 T 11-10-2018 IPR000362 Fumarate lyase family XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 Gene3D G3DSA:1.10.275.10 34 232 1.3E-103 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 Gene3D G3DSA:1.20.200.10 122 362 1.3E-103 T 11-10-2018 XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 Gene3D G3DSA:1.10.40.30 363 401 1.3E-103 T 11-10-2018 XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 Pfam PF00206 Lyase 34 302 6.9E-47 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 SUPERFAMILY SSF48557 23 409 3.3E-87 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00145 Argininosuccinate lyase family signature 196 212 2.6E-30 T 11-10-2018 XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 2.6E-30 T 11-10-2018 XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00145 Argininosuccinate lyase family signature 145 165 2.6E-30 T 11-10-2018 XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00145 Argininosuccinate lyase family signature 104 126 2.6E-30 T 11-10-2018 XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00145 Argininosuccinate lyase family signature 313 332 2.6E-30 T 11-10-2018 XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 429 30.091 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFC3_09530 1dd038b1bd7566735fd6c3c9b4ce2322 440 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PIRSF PIRSF002111 1 535 2.8E-210 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 362 435 2.1E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 18 87 1.7E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 189 261 2.5E-22 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 449 521 1.5E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 280 348 2.9E-22 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 104 172 3.0E-10 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 104 186 4.39E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 191 261 5.4E-28 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 450 521 1.6E-16 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 20 88 8.3E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 363 435 1.4E-20 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 276 348 6.4E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 104 172 7.7E-9 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 521 6.4E-208 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 188 269 8.5E-28 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 270 358 6.3E-29 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 99 184 1.3E-7 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 359 445 1.4E-23 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 1 113 1.57E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 85 104 6.2E-85 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 156 176 6.2E-85 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 109 125 6.2E-85 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 213 234 6.2E-85 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 40 54 6.2E-85 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 331 349 6.2E-85 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 291 310 6.2E-85 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 22 40 6.2E-85 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 127 144 6.2E-85 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 430 537 3.02E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 256 357 3.06E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 191 276 7.26E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 446 527 2.1E-18 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 7 98 3.4E-15 T 11-10-2018 XFC3_02760 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 348 440 1.22E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_00965 167f3ba4688118e8531511465c361643 165 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 9 138 1.7E-33 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFC3_00965 167f3ba4688118e8531511465c361643 165 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 94 105 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFC3_00965 167f3ba4688118e8531511465c361643 165 Gene3D G3DSA:3.30.70.560 6 162 3.3E-50 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFC3_00965 167f3ba4688118e8531511465c361643 165 SUPERFAMILY SSF55083 7 153 6.67E-49 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFC3_00965 167f3ba4688118e8531511465c361643 165 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 8 138 2.3E-45 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFC3_03545 2359c8b18f8e57a827cefbbf91826b52 226 Pfam PF00035 Double-stranded RNA binding motif 155 222 2.8E-13 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain XFC3_03545 2359c8b18f8e57a827cefbbf91826b52 226 Gene3D G3DSA:3.30.160.20 153 225 1.8E-22 T 11-10-2018 XFC3_03545 2359c8b18f8e57a827cefbbf91826b52 226 SUPERFAMILY SSF54768 108 222 1.23E-29 T 11-10-2018 XFC3_03545 2359c8b18f8e57a827cefbbf91826b52 226 SMART SM00358 155 223 1.5E-18 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain XFC3_03545 2359c8b18f8e57a827cefbbf91826b52 226 SUPERFAMILY SSF69065 5 157 4.19E-45 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 XFC3_03545 2359c8b18f8e57a827cefbbf91826b52 226 Gene3D G3DSA:1.10.1520.10 1 146 1.6E-40 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 XFC3_03545 2359c8b18f8e57a827cefbbf91826b52 226 SMART SM00535 20 148 1.2E-49 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 XFC3_03545 2359c8b18f8e57a827cefbbf91826b52 226 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 XFC3_03545 2359c8b18f8e57a827cefbbf91826b52 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 28.274 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 XFC3_03545 2359c8b18f8e57a827cefbbf91826b52 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 222 4.5E-73 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 XFC3_03545 2359c8b18f8e57a827cefbbf91826b52 226 Pfam PF14622 Ribonuclease-III-like 18 137 1.6E-31 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 XFC3_10905 b6620d073732127311c5fc2d5692959a 411 SUPERFAMILY SSF53067 200 378 3.04E-44 T 11-10-2018 XFC3_10905 b6620d073732127311c5fc2d5692959a 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 411 30.25 T 11-10-2018 IPR020823 Cell division protein FtsA XFC3_10905 b6620d073732127311c5fc2d5692959a 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 1.4E-158 T 11-10-2018 IPR020823 Cell division protein FtsA XFC3_10905 b6620d073732127311c5fc2d5692959a 411 Gene3D G3DSA:3.30.1490.110 87 170 7.2E-119 T 11-10-2018 XFC3_10905 b6620d073732127311c5fc2d5692959a 411 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.6E-28 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 XFC3_10905 b6620d073732127311c5fc2d5692959a 411 SMART SM00842 10 197 1.1E-97 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 XFC3_10905 b6620d073732127311c5fc2d5692959a 411 Gene3D G3DSA:3.90.640.10 236 301 7.2E-119 T 11-10-2018 XFC3_10905 b6620d073732127311c5fc2d5692959a 411 PIRSF PIRSF003101 1 411 4.2E-147 T 11-10-2018 IPR020823 Cell division protein FtsA XFC3_10905 b6620d073732127311c5fc2d5692959a 411 Gene3D G3DSA:3.30.420.40 13 360 7.2E-119 T 11-10-2018 XFC3_10905 b6620d073732127311c5fc2d5692959a 411 Pfam PF14450 Cell division protein FtsA 11 181 1.6E-11 T 11-10-2018 XFC3_10905 b6620d073732127311c5fc2d5692959a 411 SUPERFAMILY SSF53067 9 198 1.25E-58 T 11-10-2018 XFC3_10905 b6620d073732127311c5fc2d5692959a 411 Gene3D G3DSA:3.30.420.40 198 353 7.2E-119 T 11-10-2018 XFC3_10905 b6620d073732127311c5fc2d5692959a 411 Pfam PF14450 Cell division protein FtsA 208 361 1.5E-23 T 11-10-2018 XFC3_12070 c2f13b0ee30a2bf5989260e2f1f40ccf 167 SMART SM01001 8 159 1.0E-91 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 XFC3_12070 c2f13b0ee30a2bf5989260e2f1f40ccf 167 Gene3D G3DSA:3.40.50.7700 2 166 1.6E-68 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 XFC3_12070 c2f13b0ee30a2bf5989260e2f1f40ccf 167 PIRSF PIRSF001338 5 167 8.1E-65 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 XFC3_12070 c2f13b0ee30a2bf5989260e2f1f40ccf 167 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 164 3.1E-62 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 XFC3_12070 c2f13b0ee30a2bf5989260e2f1f40ccf 167 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 31.908 T 11-10-2018 IPR033747 Class I PurE XFC3_12070 c2f13b0ee30a2bf5989260e2f1f40ccf 167 SUPERFAMILY SSF52255 7 165 3.4E-64 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 XFC3_12070 c2f13b0ee30a2bf5989260e2f1f40ccf 167 Pfam PF00731 AIR carboxylase 10 157 1.4E-60 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 XFC3_08725 bd6418adb5ca6485d750469acf01f367 236 Gene3D G3DSA:3.10.290.10 1 54 1.5E-7 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XFC3_08725 bd6418adb5ca6485d750469acf01f367 236 Gene3D G3DSA:3.30.70.1560 128 210 7.0E-47 T 11-10-2018 XFC3_08725 bd6418adb5ca6485d750469acf01f367 236 SUPERFAMILY SSF55120 60 227 3.52E-37 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_08725 bd6418adb5ca6485d750469acf01f367 236 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 64 223 1.5E-39 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 XFC3_08725 bd6418adb5ca6485d750469acf01f367 236 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 XFC3_08725 bd6418adb5ca6485d750469acf01f367 236 Pfam PF00849 RNA pseudouridylate synthase 61 191 1.8E-12 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_08725 bd6418adb5ca6485d750469acf01f367 236 Gene3D G3DSA:3.30.70.580 61 226 7.0E-47 T 11-10-2018 XFC3_09385 f68b44a539facb604720c13cf760b90b 444 SMART SM00228 209 279 5.7E-4 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFC3_09385 f68b44a539facb604720c13cf760b90b 444 SMART SM00228 116 185 0.21 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFC3_09385 f68b44a539facb604720c13cf760b90b 444 SUPERFAMILY SSF50156 88 183 4.47E-11 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFC3_09385 f68b44a539facb604720c13cf760b90b 444 Pfam PF02163 Peptidase family M50 11 432 1.0E-76 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 XFC3_09385 f68b44a539facb604720c13cf760b90b 444 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 10 443 1.6E-101 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 XFC3_09385 f68b44a539facb604720c13cf760b90b 444 Gene3D G3DSA:2.30.42.10 133 216 2.4E-8 T 11-10-2018 XFC3_09385 f68b44a539facb604720c13cf760b90b 444 Gene3D G3DSA:2.30.42.10 221 303 1.3E-12 T 11-10-2018 XFC3_09385 f68b44a539facb604720c13cf760b90b 444 SUPERFAMILY SSF50156 210 288 3.94E-11 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFC3_04315 3246bd1b4ef85a808bc219828ea4838b 351 Gene3D G3DSA:3.90.580.10 2 95 4.1E-31 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 XFC3_04315 3246bd1b4ef85a808bc219828ea4838b 351 SUPERFAMILY SSF57783 6 86 2.38E-29 T 11-10-2018 XFC3_04315 3246bd1b4ef85a808bc219828ea4838b 351 SMART SM00400 32 86 7.3E-27 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XFC3_04315 3246bd1b4ef85a808bc219828ea4838b 351 Pfam PF01807 CHC2 zinc finger 6 86 1.4E-30 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XFC3_00820 137da040da8ab015b2c1ab375fc956d0 446 Gene3D G3DSA:3.40.50.300 1 208 1.9E-76 T 11-10-2018 XFC3_00820 137da040da8ab015b2c1ab375fc956d0 446 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XFC3_00820 137da040da8ab015b2c1ab375fc956d0 446 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.7E-29 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_00820 137da040da8ab015b2c1ab375fc956d0 446 SUPERFAMILY SSF52540 74 360 1.25E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_00820 137da040da8ab015b2c1ab375fc956d0 446 Pfam PF00270 DEAD/DEAH box helicase 25 196 2.1E-50 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFC3_00820 137da040da8ab015b2c1ab375fc956d0 446 SMART SM00490 259 340 2.4E-31 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_00820 137da040da8ab015b2c1ab375fc956d0 446 SMART SM00487 20 223 1.1E-58 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_00820 137da040da8ab015b2c1ab375fc956d0 446 Gene3D G3DSA:3.40.50.300 209 374 5.7E-48 T 11-10-2018 XFC3_03990 05d6ce155097894616775642047147c1 258 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 2.2E-95 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XFC3_03990 05d6ce155097894616775642047147c1 258 Gene3D G3DSA:3.60.15.10 1 252 1.7E-85 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFC3_03990 05d6ce155097894616775642047147c1 258 SUPERFAMILY SSF56281 1 253 3.68E-67 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFC3_03990 05d6ce155097894616775642047147c1 258 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 165 252 6.6E-26 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XFC3_03990 05d6ce155097894616775642047147c1 258 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 252 40.363 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XFC3_03990 05d6ce155097894616775642047147c1 258 PIRSF PIRSF005457 1 252 1.2E-85 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XFC3_03990 05d6ce155097894616775642047147c1 258 SMART SM00849 12 164 1.7E-34 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFC3_03990 05d6ce155097894616775642047147c1 258 Pfam PF00753 Metallo-beta-lactamase superfamily 15 164 1.0E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFC3_09545 21e4a961b11dfaaeddd51bd34336f0d6 364 Gene3D G3DSA:3.30.70.360 166 279 7.2E-107 T 11-10-2018 XFC3_09545 21e4a961b11dfaaeddd51bd34336f0d6 364 Pfam PF07687 Peptidase dimerisation domain 163 265 6.7E-15 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain XFC3_09545 21e4a961b11dfaaeddd51bd34336f0d6 364 Pfam PF01546 Peptidase family M20/M25/M40 67 362 7.8E-21 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 XFC3_09545 21e4a961b11dfaaeddd51bd34336f0d6 364 SUPERFAMILY SSF53187 3 362 5.39E-35 T 11-10-2018 XFC3_09545 21e4a961b11dfaaeddd51bd34336f0d6 364 Gene3D G3DSA:3.40.630.10 15 350 7.2E-107 T 11-10-2018 XFC3_09545 21e4a961b11dfaaeddd51bd34336f0d6 364 SUPERFAMILY SSF55031 165 265 3.84E-13 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 SUPERFAMILY SSF50249 130 187 9.25E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 8.5E-19 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 2 61 3.9E-11 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 Gene3D G3DSA:2.40.50.140 130 187 2.9E-19 T 11-10-2018 XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 SMART SM01185 68 123 2.1E-13 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 SUPERFAMILY SSF50249 68 128 2.06E-9 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 2 187 1.8E-97 T 11-10-2018 IPR011897 Translation elongation factor P-like, YeiP XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 PIRSF PIRSF005901 1 188 6.4E-62 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 1 187 36.271 T 11-10-2018 IPR011897 Translation elongation factor P-like, YeiP XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 SUPERFAMILY SSF50104 2 62 1.2E-8 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 1.6E-12 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 Gene3D G3DSA:2.30.30.30 1 62 1.8E-7 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 SMART SM00841 131 186 1.0E-20 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XFC3_03745 3ca69b4fc73ba2187bd348975b72caed 188 Gene3D G3DSA:2.40.50.140 66 128 8.5E-14 T 11-10-2018 XFC3_05725 26a6cac64d17acaee27dfee0046fa82a 93 SUPERFAMILY SSF143011 5 93 2.09E-12 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XFC3_05725 26a6cac64d17acaee27dfee0046fa82a 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 25 93 1.2E-16 T 11-10-2018 IPR007711 Toxin HigB-1 XFC3_05725 26a6cac64d17acaee27dfee0046fa82a 93 Gene3D G3DSA:3.30.2310.20 1 93 3.0E-18 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 316 366 1.3E-13 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 Gene3D G3DSA:3.30.56.50 3 52 2.2E-10 T 11-10-2018 XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 SUPERFAMILY SSF46955 4 52 4.21E-9 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 310 893 1.2E-240 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 Gene3D G3DSA:3.40.50.10050 687 793 9.2E-33 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 69 105 6.3E-9 T 11-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 SUPERFAMILY SSF52156 677 800 3.79E-33 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 Pfam PF00009 Elongation factor Tu GTP binding domain 397 552 1.8E-32 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 395 550 6.3E-30 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 Gene3D G3DSA:3.40.50.300 390 562 2.8E-67 T 11-10-2018 XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 891 16.588 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 Gene3D G3DSA:2.40.30.10 563 680 7.3E-39 T 11-10-2018 XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 SUPERFAMILY SSF52540 384 557 1.23E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 SUPERFAMILY SSF50447 795 891 3.53E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 Pfam PF11987 Translation-initiation factor 2 679 783 3.8E-33 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 ProSitePatterns PS01176 Initiation factor 2 signature. 844 866 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 Gene3D G3DSA:2.40.30.10 794 892 1.7E-30 T 11-10-2018 XFC3_01010 d9c1170cab6f2a80057fb57cdf36cfb2 893 SUPERFAMILY SSF50447 565 648 1.85E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 PIRSF PIRSF036459 1 868 0.0 T 11-10-2018 IPR011246 Bifunctional diaminopimelate decarboxylase/aspartate kinase XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:2.40.37.10 510 867 6.9E-95 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 537 555 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 ProSitePatterns PS00324 Aspartokinase signature. 12 20 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 641 650 1.7E-13 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 772 790 1.7E-13 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 855 868 1.7E-13 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 555 572 1.7E-13 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF53633 9 305 2.09E-57 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 697 713 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 Pfam PF00696 Amino acid kinase family 10 291 1.5E-41 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF55021 313 405 2.59E-11 T 11-10-2018 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 9 460 7.4E-82 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:3.20.20.10 516 758 6.9E-95 T 11-10-2018 IPR029066 PLP-binding barrel XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 515 845 1.1E-20 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF51419 510 756 8.58E-56 T 11-10-2018 IPR029066 PLP-binding barrel XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:3.30.70.260 317 456 1.4E-34 T 11-10-2018 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF55021 388 462 2.21E-9 T 11-10-2018 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF50621 734 866 1.34E-41 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 519 754 6.6E-41 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 509 867 5.3E-90 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 744 763 4.9E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 537 555 4.9E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 666 679 4.9E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 845 858 4.9E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 557 569 4.9E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:3.30.70.260 323 395 1.4E-34 T 11-10-2018 XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:3.40.1160.10 12 303 2.8E-70 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFC3_09105 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:1.20.120.1320 52 141 2.8E-70 T 11-10-2018 XFC3_00555 9b5dafde68039a19e6df0035ce10116d 141 SUPERFAMILY SSF102400 1 140 2.09E-37 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily XFC3_00555 9b5dafde68039a19e6df0035ce10116d 141 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 136 1.0E-33 T 11-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 XFC3_00555 9b5dafde68039a19e6df0035ce10116d 141 Gene3D G3DSA:3.40.50.10110 1 140 9.7E-38 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily XFC3_09145 6308cee9b7cff38ed4deae8e6b2281d5 154 PIRSF PIRSF006092 1 154 4.4E-50 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 XFC3_09145 6308cee9b7cff38ed4deae8e6b2281d5 154 Gene3D G3DSA:1.10.287.180 1 70 2.8E-30 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 XFC3_09145 6308cee9b7cff38ed4deae8e6b2281d5 154 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 12 43 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 XFC3_09145 6308cee9b7cff38ed4deae8e6b2281d5 154 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 151 31.768 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 XFC3_09145 6308cee9b7cff38ed4deae8e6b2281d5 154 SUPERFAMILY SSF46557 1 72 3.4E-28 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 XFC3_09145 6308cee9b7cff38ed4deae8e6b2281d5 154 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 79 152 2.7E-26 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 XFC3_09145 6308cee9b7cff38ed4deae8e6b2281d5 154 Gene3D G3DSA:3.10.50.30 71 153 1.9E-28 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 XFC3_09145 6308cee9b7cff38ed4deae8e6b2281d5 154 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 1 151 1.8E-56 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 XFC3_09145 6308cee9b7cff38ed4deae8e6b2281d5 154 SUPERFAMILY SSF54534 78 152 2.09E-22 T 11-10-2018 XFC3_09145 6308cee9b7cff38ed4deae8e6b2281d5 154 Pfam PF03449 Transcription elongation factor, N-terminal 1 69 5.8E-31 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 SUPERFAMILY SSF50715 364 575 1.78E-68 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 35 578 2.0E-198 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:2.40.240.10 364 574 2.6E-70 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 364 556 4.8E-53 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 SUPERFAMILY SSF52374 19 362 4.74E-89 T 11-10-2018 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:3.90.800.10 107 215 2.7E-95 T 11-10-2018 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:1.10.1160.10 285 363 9.0E-34 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 277 361 2.7E-16 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 35 261 1.6E-77 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 6 577 52.1 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 226 5.8E-9 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 50 5.8E-9 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 PRINTS PR00987 Glutamyl-tRNA synthetase signature 67 80 5.8E-9 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:2.40.240.10 372 490 2.6E-70 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFC3_08175 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:3.40.50.620 36 253 2.7E-95 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_11195 0611e38bb0b3fc182f0b27e2f53d4435 159 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 3 158 3.5E-61 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XFC3_11195 0611e38bb0b3fc182f0b27e2f53d4435 159 SUPERFAMILY SSF55200 71 158 4.97E-30 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 XFC3_11195 0611e38bb0b3fc182f0b27e2f53d4435 159 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 71 155 2.8E-35 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 XFC3_11195 0611e38bb0b3fc182f0b27e2f53d4435 159 Gene3D G3DSA:3.10.20.80 1 63 2.9E-28 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XFC3_11195 0611e38bb0b3fc182f0b27e2f53d4435 159 Gene3D G3DSA:3.30.110.10 64 159 3.4E-36 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 XFC3_11195 0611e38bb0b3fc182f0b27e2f53d4435 159 SUPERFAMILY SSF54364 2 66 1.02E-25 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XFC3_11195 0611e38bb0b3fc182f0b27e2f53d4435 159 ProSitePatterns PS00938 Initiation factor 3 signature. 46 59 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 XFC3_11195 0611e38bb0b3fc182f0b27e2f53d4435 159 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 64 4.4E-26 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XFC3_11195 0611e38bb0b3fc182f0b27e2f53d4435 159 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 158 27.826 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XFC3_03720 9548b9fe2c8a30734e985d478f35da1e 218 SUPERFAMILY SSF53639 17 215 8.04E-43 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily XFC3_03720 9548b9fe2c8a30734e985d478f35da1e 218 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 208 1.8E-37 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal XFC3_03720 9548b9fe2c8a30734e985d478f35da1e 218 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 217 101.553 T 11-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 XFC3_03720 9548b9fe2c8a30734e985d478f35da1e 218 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 25 213 5.6E-69 T 11-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 XFC3_03720 9548b9fe2c8a30734e985d478f35da1e 218 Gene3D G3DSA:3.40.225.10 13 215 6.0E-44 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily XFC3_03720 9548b9fe2c8a30734e985d478f35da1e 218 SMART SM01007 21 209 5.6E-45 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 503 2.2E-136 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 646 0.0 T 11-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 Gene3D G3DSA:1.20.210.10 30 564 4.2E-189 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 382 400 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 215 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 460 481 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 165 177 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 368 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 119 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 410 429 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 338 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 123 147 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 226 245 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 277 298 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 SUPERFAMILY SSF81442 42 557 6.28E-177 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07965 68422c911dd8dbe94664bfde7202900a 665 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 279 333 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_03210 5309501cb1ed1118873d3197e8ab8629 248 SMART SM00382 30 213 1.3E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_03210 5309501cb1ed1118873d3197e8ab8629 248 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_03210 5309501cb1ed1118873d3197e8ab8629 248 Gene3D G3DSA:3.40.50.300 1 245 4.4E-66 T 11-10-2018 XFC3_03210 5309501cb1ed1118873d3197e8ab8629 248 Pfam PF00005 ABC transporter 22 165 6.1E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_03210 5309501cb1ed1118873d3197e8ab8629 248 SUPERFAMILY SSF52540 2 226 9.85E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11560 f05fb559ea48664e70e3d26894e5d5ab 387 Gene3D G3DSA:3.40.50.261 240 386 6.6E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XFC3_11560 f05fb559ea48664e70e3d26894e5d5ab 387 Gene3D G3DSA:3.30.1490.20 21 104 2.6E-90 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XFC3_11560 f05fb559ea48664e70e3d26894e5d5ab 387 PIRSF PIRSF001554 1 387 7.3E-152 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFC3_11560 f05fb559ea48664e70e3d26894e5d5ab 387 Gene3D G3DSA:3.30.470.20 1 234 2.6E-90 T 11-10-2018 XFC3_11560 f05fb559ea48664e70e3d26894e5d5ab 387 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.939 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFC3_11560 f05fb559ea48664e70e3d26894e5d5ab 387 SUPERFAMILY SSF52210 239 384 4.84E-52 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XFC3_11560 f05fb559ea48664e70e3d26894e5d5ab 387 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XFC3_11560 f05fb559ea48664e70e3d26894e5d5ab 387 Pfam PF08442 ATP-grasp domain 2 202 1.7E-73 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFC3_11560 f05fb559ea48664e70e3d26894e5d5ab 387 Pfam PF00549 CoA-ligase 262 381 1.4E-25 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XFC3_11560 f05fb559ea48664e70e3d26894e5d5ab 387 SUPERFAMILY SSF56059 1 238 9.02E-79 T 11-10-2018 XFC3_11560 f05fb559ea48664e70e3d26894e5d5ab 387 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.7E-160 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFC3_01980 0f13d4a89ec79d8878ac09bd68d6d2b3 151 Pfam PF07963 Prokaryotic N-terminal methylation motif 27 45 1.5E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_01980 0f13d4a89ec79d8878ac09bd68d6d2b3 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 60 78 4.0E-7 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 XFC3_01980 0f13d4a89ec79d8878ac09bd68d6d2b3 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 24 49 4.0E-7 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 XFC3_01980 0f13d4a89ec79d8878ac09bd68d6d2b3 151 SUPERFAMILY SSF54523 27 140 1.52E-22 T 11-10-2018 XFC3_01980 0f13d4a89ec79d8878ac09bd68d6d2b3 151 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 27 45 3.0E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_01980 0f13d4a89ec79d8878ac09bd68d6d2b3 151 Gene3D G3DSA:3.30.700.10 26 150 3.1E-20 T 11-10-2018 XFC3_01980 0f13d4a89ec79d8878ac09bd68d6d2b3 151 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 46 132 6.1E-24 T 11-10-2018 IPR031982 Type IV minor pilin ComP XFC3_05095 3cef6f7f19e7384c069ade1c6622d66c 216 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 47 201 4.8E-60 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XFC3_05095 3cef6f7f19e7384c069ade1c6622d66c 216 Gene3D G3DSA:3.30.1060.10 7 216 2.4E-81 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XFC3_05095 3cef6f7f19e7384c069ade1c6622d66c 216 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 45 207 36.658 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XFC3_05095 3cef6f7f19e7384c069ade1c6622d66c 216 Pfam PF01625 Peptide methionine sulfoxide reductase 48 201 1.2E-61 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XFC3_05095 3cef6f7f19e7384c069ade1c6622d66c 216 SUPERFAMILY SSF55068 13 212 6.28E-74 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XFC3_10215 44b2bae693a20ebd8e2502464e7bcdc5 159 Gene3D G3DSA:3.40.30.10 1 159 2.5E-47 T 11-10-2018 XFC3_10215 44b2bae693a20ebd8e2502464e7bcdc5 159 SUPERFAMILY SSF52833 23 156 2.85E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_10215 44b2bae693a20ebd8e2502464e7bcdc5 159 Pfam PF00578 AhpC/TSA family 24 135 1.1E-27 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XFC3_10215 44b2bae693a20ebd8e2502464e7bcdc5 159 PIRSF PIRSF000239 5 159 9.0E-25 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 SUPERFAMILY SSF52540 546 858 1.3E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:3.40.50.300 550 767 1.9E-86 T 11-10-2018 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 763 1.8E-55 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:1.10.8.60 769 861 4.1E-27 T 11-10-2018 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:1.10.1780.10 1 147 1.0E-30 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 2.0E-9 T 11-10-2018 IPR004176 Clp, N-terminal XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.6E-11 T 11-10-2018 IPR004176 Clp, N-terminal XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:3.40.50.300 148 342 6.6E-74 T 11-10-2018 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 5.6E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 SMART SM01086 769 858 8.0E-36 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 SUPERFAMILY SSF52540 159 545 3.28E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.2E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.2E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.2E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.2E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:3.40.50.300 343 544 1.4E-69 T 11-10-2018 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 849 5.8E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 SUPERFAMILY SSF81923 4 156 5.3E-37 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 SMART SM00382 198 344 2.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_01605 4a609b79c32900205e848cad2b7228d1 861 SMART SM00382 597 770 1.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 PIRSF PIRSF000099 1 430 1.1E-157 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 SUPERFAMILY SSF53720 3 427 1.49E-78 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 Gene3D G3DSA:3.40.50.1980 234 349 3.0E-117 T 11-10-2018 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 427 40.899 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 Pfam PF00815 Histidinol dehydrogenase 26 427 2.6E-160 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.3E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 1.3E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 1.3E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 PRINTS PR00083 Histidinol dehydrogenase signature 199 224 1.3E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.3E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 PRINTS PR00083 Histidinol dehydrogenase signature 169 195 1.3E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.3E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.3E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 Gene3D G3DSA:3.40.50.1980 31 232 3.0E-117 T 11-10-2018 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 XFC3_03675 0699ef05bbf0171f15df2e1eb7d3f144 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 426 3.8E-158 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 SUPERFAMILY SSF47384 172 255 3.92E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 Gene3D G3DSA:1.10.287.130 169 252 4.0E-25 T 11-10-2018 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 SUPERFAMILY SSF47226 595 708 1.57E-13 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 Pfam PF00512 His Kinase A (phospho-acceptor) domain 189 254 8.7E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 SMART SM00448 457 572 3.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 Pfam PF00072 Response regulator receiver domain 459 571 5.2E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 Gene3D G3DSA:3.40.50.2300 443 578 2.1E-34 T 11-10-2018 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 SUPERFAMILY SSF55874 244 416 7.99E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 396 5.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 415 5.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 371 5.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 5.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 SMART SM00388 189 254 8.8E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 SMART SM00073 612 707 0.0019 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 Pfam PF01627 Hpt domain 625 698 4.2E-7 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 SUPERFAMILY SSF52172 455 577 1.35E-31 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 301 417 1.1E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 Gene3D G3DSA:1.20.120.160 590 709 1.5E-9 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 SMART SM00387 301 418 5.4E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_09115 56e01f30c3b80d384a836a37e64fc635 717 Gene3D G3DSA:3.30.565.10 253 421 5.9E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_05535 631d256c54d53bf8b7347ef7c5dd01d6 910 SUPERFAMILY SSF103515 608 910 4.58E-31 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFC3_05535 631d256c54d53bf8b7347ef7c5dd01d6 910 Gene3D G3DSA:2.40.128.130 600 910 1.1E-31 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFC3_05535 631d256c54d53bf8b7347ef7c5dd01d6 910 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 376 408 1.0E-11 T 11-10-2018 IPR013425 Autotransporter-associated beta strand repeat XFC3_05535 631d256c54d53bf8b7347ef7c5dd01d6 910 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 287 297 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site XFC3_05535 631d256c54d53bf8b7347ef7c5dd01d6 910 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 36 47 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site XFC3_05535 631d256c54d53bf8b7347ef7c5dd01d6 910 Pfam PF12951 Passenger-associated-transport-repeat 377 407 1.2E-9 T 11-10-2018 IPR013425 Autotransporter-associated beta strand repeat XFC3_05535 631d256c54d53bf8b7347ef7c5dd01d6 910 PRINTS PR00723 Subtilisin serine protease family (S8) signature 74 87 8.4E-11 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFC3_05535 631d256c54d53bf8b7347ef7c5dd01d6 910 PRINTS PR00723 Subtilisin serine protease family (S8) signature 31 50 8.4E-11 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFC3_05535 631d256c54d53bf8b7347ef7c5dd01d6 910 PRINTS PR00723 Subtilisin serine protease family (S8) signature 286 302 8.4E-11 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFC3_05535 631d256c54d53bf8b7347ef7c5dd01d6 910 SUPERFAMILY SSF52743 12 348 4.71E-55 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XFC3_05535 631d256c54d53bf8b7347ef7c5dd01d6 910 Gene3D G3DSA:3.40.50.200 9 348 2.0E-55 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XFC3_05535 631d256c54d53bf8b7347ef7c5dd01d6 910 Pfam PF03797 Autotransporter beta-domain 649 879 1.5E-28 T 11-10-2018 IPR005546 Autotransporter beta-domain XFC3_05535 631d256c54d53bf8b7347ef7c5dd01d6 910 SMART SM00869 642 900 4.1E-19 T 11-10-2018 IPR005546 Autotransporter beta-domain XFC3_05535 631d256c54d53bf8b7347ef7c5dd01d6 910 Pfam PF00082 Subtilase family 31 337 3.5E-36 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 XFC3_00510 fde048a9b8c9e0004e3f6f3d5db551b2 71 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 1.1E-26 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XFC3_00510 fde048a9b8c9e0004e3f6f3d5db551b2 71 Gene3D G3DSA:3.30.70.1680 1 58 5.1E-28 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 XFC3_00510 fde048a9b8c9e0004e3f6f3d5db551b2 71 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 7.0E-21 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XFC3_00510 fde048a9b8c9e0004e3f6f3d5db551b2 71 SUPERFAMILY SSF117130 1 53 3.01E-20 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 XFC3_00510 fde048a9b8c9e0004e3f6f3d5db551b2 71 Pfam PF02599 Global regulator protein family 1 52 2.7E-26 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XFC3_00510 fde048a9b8c9e0004e3f6f3d5db551b2 71 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 71 16.759 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XFC3_03915 575fe63e0518301323a411fa33f7c5a9 370 SUPERFAMILY SSF53955 60 365 6.65E-81 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_03915 575fe63e0518301323a411fa33f7c5a9 370 Pfam PF13406 Transglycosylase SLT domain 59 360 1.0E-88 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 XFC3_03915 575fe63e0518301323a411fa33f7c5a9 370 Gene3D G3DSA:1.10.8.350 64 244 3.5E-98 T 11-10-2018 XFC3_03915 575fe63e0518301323a411fa33f7c5a9 370 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 362 3.3E-113 T 11-10-2018 IPR011757 Lytic transglycosylase MltB XFC3_03915 575fe63e0518301323a411fa33f7c5a9 370 Gene3D G3DSA:1.10.530.10 98 359 3.5E-98 T 11-10-2018 XFC3_04720 afbde4434aaca7d9f00ef0d168670141 185 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 XFC3_04720 afbde4434aaca7d9f00ef0d168670141 185 SUPERFAMILY SSF46689 138 181 1.03E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFC3_04720 afbde4434aaca7d9f00ef0d168670141 185 SMART SM00857 2 136 1.6E-57 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 XFC3_04720 afbde4434aaca7d9f00ef0d168670141 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 XFC3_04720 afbde4434aaca7d9f00ef0d168670141 185 SUPERFAMILY SSF53041 1 135 1.06E-44 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 XFC3_04720 afbde4434aaca7d9f00ef0d168670141 185 Pfam PF02796 Helix-turn-helix domain of resolvase 138 179 7.2E-7 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 XFC3_04720 afbde4434aaca7d9f00ef0d168670141 185 Gene3D G3DSA:1.10.10.60 138 184 2.9E-7 T 11-10-2018 XFC3_04720 afbde4434aaca7d9f00ef0d168670141 185 Pfam PF00239 Resolvase, N terminal domain 3 135 6.5E-46 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 XFC3_04720 afbde4434aaca7d9f00ef0d168670141 185 Gene3D G3DSA:3.40.50.1390 1 125 4.7E-52 T 11-10-2018 XFC3_07640 1849fe54627eb7be184ee12cd3a5c219 385 Gene3D G3DSA:2.30.40.10 13 382 3.2E-126 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XFC3_07640 1849fe54627eb7be184ee12cd3a5c219 385 Pfam PF01979 Amidohydrolase family 59 382 2.0E-28 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 XFC3_07640 1849fe54627eb7be184ee12cd3a5c219 385 SUPERFAMILY SSF51338 10 375 1.9E-12 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XFC3_07640 1849fe54627eb7be184ee12cd3a5c219 385 Gene3D G3DSA:3.20.20.140 63 350 3.2E-126 T 11-10-2018 XFC3_07640 1849fe54627eb7be184ee12cd3a5c219 385 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 10 382 4.2E-100 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 XFC3_07640 1849fe54627eb7be184ee12cd3a5c219 385 SUPERFAMILY SSF51556 62 356 9.07E-99 T 11-10-2018 IPR032466 Metal-dependent hydrolase XFC3_07640 1849fe54627eb7be184ee12cd3a5c219 385 PIRSF PIRSF038994 8 384 3.4E-113 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 XFC3_07265 ec036d7e360a0e5d32a9207767593748 253 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 18 252 36.88 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 XFC3_07265 ec036d7e360a0e5d32a9207767593748 253 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 27 252 6.1E-81 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 XFC3_07265 ec036d7e360a0e5d32a9207767593748 253 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 38 53 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 XFC3_07265 ec036d7e360a0e5d32a9207767593748 253 Pfam PF01209 ubiE/COQ5 methyltransferase family 21 252 1.6E-89 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 XFC3_07265 ec036d7e360a0e5d32a9207767593748 253 SUPERFAMILY SSF53335 22 249 1.13E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_07265 ec036d7e360a0e5d32a9207767593748 253 Gene3D G3DSA:3.40.50.150 33 253 9.6E-70 T 11-10-2018 XFC3_07265 ec036d7e360a0e5d32a9207767593748 253 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 160 174 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 XFC3_06675 29b25cda1f0a67fdb63834b0195f79da 455 Pfam PF00144 Beta-lactamase 68 395 2.4E-64 T 11-10-2018 IPR001466 Beta-lactamase-related XFC3_06675 29b25cda1f0a67fdb63834b0195f79da 455 SUPERFAMILY SSF56601 62 402 2.47E-74 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFC3_06675 29b25cda1f0a67fdb63834b0195f79da 455 Gene3D G3DSA:3.40.710.10 57 396 3.4E-77 T 11-10-2018 XFC3_03110 33b112ceb193f7c4e65ecd61f907d454 248 Pfam PF01048 Phosphorylase superfamily 6 222 7.1E-38 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 XFC3_03110 33b112ceb193f7c4e65ecd61f907d454 248 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 52 92 - T 11-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 XFC3_03110 33b112ceb193f7c4e65ecd61f907d454 248 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 4 248 33.324 T 11-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 XFC3_03110 33b112ceb193f7c4e65ecd61f907d454 248 SUPERFAMILY SSF53167 5 247 4.45E-74 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 XFC3_03110 33b112ceb193f7c4e65ecd61f907d454 248 Gene3D G3DSA:3.40.50.1580 1 248 4.2E-75 T 11-10-2018 XFC3_00920 cd967606d8426421e32438dde0862ae2 400 Gene3D G3DSA:3.40.350.10 1 165 1.3E-44 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XFC3_00920 cd967606d8426421e32438dde0862ae2 400 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 166 2.2E-15 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 XFC3_00920 cd967606d8426421e32438dde0862ae2 400 SUPERFAMILY SSF53092 18 165 3.84E-21 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XFC3_00920 cd967606d8426421e32438dde0862ae2 400 SUPERFAMILY SSF55920 166 392 5.23E-65 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like XFC3_00920 cd967606d8426421e32438dde0862ae2 400 Pfam PF00557 Metallopeptidase family M24 175 382 2.5E-47 T 11-10-2018 IPR000994 Peptidase M24 XFC3_00920 cd967606d8426421e32438dde0862ae2 400 Gene3D G3DSA:3.90.230.10 166 399 2.7E-71 T 11-10-2018 XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 Hamap MF_01498 DNA repair protein RadA [radA]. 26 463 42.711 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 SMART SM00382 99 252 8.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 330 353 3.3E-91 T 11-10-2018 XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 132 149 3.3E-91 T 11-10-2018 XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 182 206 3.3E-91 T 11-10-2018 XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 221 249 3.3E-91 T 11-10-2018 XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 15 39 3.3E-91 T 11-10-2018 XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 91 119 3.3E-91 T 11-10-2018 XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 256 282 3.3E-91 T 11-10-2018 XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 SUPERFAMILY SSF52540 77 299 3.04E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 TIGRFAM TIGR00416 sms: DNA repair protein RadA 7 459 8.9E-186 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 Pfam PF13481 AAA domain 92 230 6.1E-12 T 11-10-2018 XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 Gene3D G3DSA:3.40.50.300 70 294 9.8E-40 T 11-10-2018 XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 SUPERFAMILY SSF54211 263 461 4.17E-39 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 Gene3D G3DSA:3.30.230.10 305 463 1.1E-16 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFC3_08020 d69d321618fbca747471e71e9d91f4d0 463 Pfam PF13541 Subunit ChlI of Mg-chelatase 359 438 1.5E-8 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 SUPERFAMILY SSF51905 119 458 1.49E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 SUPERFAMILY SSF55424 471 592 3.09E-38 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 157 167 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 Pfam PF00364 Biotin-requiring enzyme 5 75 1.8E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PIRSF PIRSF000350 76 594 4.6E-86 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 123 449 7.0E-69 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 123 585 1.5E-153 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 311 6.1E-39 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 124 143 6.1E-39 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 272 6.1E-39 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 414 436 6.1E-39 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 385 401 6.1E-39 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 Gene3D G3DSA:2.40.50.100 2 81 4.3E-18 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 293 318 1.0E-70 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 266 1.0E-70 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 534 549 1.0E-70 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 556 576 1.0E-70 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 123 145 1.0E-70 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 469 490 1.0E-70 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 171 1.0E-70 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 386 400 1.0E-70 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 436 1.0E-70 T 11-10-2018 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 Gene3D G3DSA:3.50.50.60 124 454 3.7E-119 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 473 580 1.9E-34 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 Gene3D G3DSA:3.50.50.60 269 395 3.7E-119 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 SUPERFAMILY SSF51230 2 92 6.28E-21 T 11-10-2018 IPR011053 Single hybrid motif XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XFC3_10655 78f59e7e1db1f5d02388552347d30f82 603 Gene3D G3DSA:3.30.390.30 472 593 2.0E-42 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XFC3_01680 6cab8c98c1a6b20b75be703b7903de7c 566 SMART SM00052 314 557 2.6E-11 T 11-10-2018 IPR001633 EAL domain XFC3_01680 6cab8c98c1a6b20b75be703b7903de7c 566 SUPERFAMILY SSF52172 19 161 6.12E-35 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_01680 6cab8c98c1a6b20b75be703b7903de7c 566 SMART SM00448 20 133 3.5E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_01680 6cab8c98c1a6b20b75be703b7903de7c 566 Pfam PF00072 Response regulator receiver domain 22 133 2.0E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_01680 6cab8c98c1a6b20b75be703b7903de7c 566 Pfam PF00990 Diguanylate cyclase, GGDEF domain 161 306 4.5E-7 T 11-10-2018 IPR000160 GGDEF domain XFC3_01680 6cab8c98c1a6b20b75be703b7903de7c 566 Gene3D G3DSA:3.20.20.450 319 560 2.2E-40 T 11-10-2018 IPR035919 EAL domain superfamily XFC3_01680 6cab8c98c1a6b20b75be703b7903de7c 566 Gene3D G3DSA:3.30.70.270 163 313 7.0E-13 T 11-10-2018 XFC3_01680 6cab8c98c1a6b20b75be703b7903de7c 566 Pfam PF00563 EAL domain 325 551 4.4E-35 T 11-10-2018 IPR001633 EAL domain XFC3_01680 6cab8c98c1a6b20b75be703b7903de7c 566 Gene3D G3DSA:3.40.50.2300 14 162 6.0E-34 T 11-10-2018 XFC3_01680 6cab8c98c1a6b20b75be703b7903de7c 566 SUPERFAMILY SSF55073 162 312 3.84E-13 T 11-10-2018 IPR029787 Nucleotide cyclase XFC3_01680 6cab8c98c1a6b20b75be703b7903de7c 566 SUPERFAMILY SSF141868 325 551 3.14E-37 T 11-10-2018 IPR035919 EAL domain superfamily XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 PRINTS PR00775 90kDa heat shock protein signature 78 95 3.8E-58 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 PRINTS PR00775 90kDa heat shock protein signature 123 145 3.8E-58 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 PRINTS PR00775 90kDa heat shock protein signature 193 211 3.8E-58 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 PRINTS PR00775 90kDa heat shock protein signature 8 28 3.8E-58 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 PRINTS PR00775 90kDa heat shock protein signature 96 113 3.8E-58 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 PRINTS PR00775 90kDa heat shock protein signature 175 192 3.8E-58 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 PRINTS PR00775 90kDa heat shock protein signature 29 51 3.8E-58 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 Pfam PF00183 Hsp90 protein 221 631 3.5E-130 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 632 31.77 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 185 5.0E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 Gene3D G3DSA:3.30.230.80 237 404 3.2E-68 T 11-10-2018 XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 SUPERFAMILY SSF54211 238 493 1.82E-95 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 SMART SM00387 30 187 2.1E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 Gene3D G3DSA:3.40.50.11260 405 491 4.2E-32 T 11-10-2018 XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 PIRSF PIRSF002583 2 636 9.4E-211 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 Gene3D G3DSA:1.20.120.790 500 633 1.9E-40 T 11-10-2018 IPR037196 HSP90, C-terminal domain XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 SUPERFAMILY SSF55874 8 217 1.17E-64 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 Gene3D G3DSA:3.30.565.10 1 231 3.8E-76 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_09635 9882266d273afffffc55b6bd03e3a9cb 636 SUPERFAMILY SSF110942 520 632 3.53E-33 T 11-10-2018 IPR037196 HSP90, C-terminal domain XFC3_09600 b2217260ca2949ce44e64982337fbeb3 285 Gene3D G3DSA:2.70.70.10 127 284 8.1E-46 T 11-10-2018 IPR011055 Duplicated hybrid motif XFC3_09600 b2217260ca2949ce44e64982337fbeb3 285 SUPERFAMILY SSF51261 43 281 3.4E-51 T 11-10-2018 IPR011055 Duplicated hybrid motif XFC3_09600 b2217260ca2949ce44e64982337fbeb3 285 Pfam PF01551 Peptidase family M23 182 277 5.6E-29 T 11-10-2018 IPR016047 Peptidase M23 XFC3_04655 7e98d9eb1aaf4e0dfb7bdbf24c7d58ba 240 Gene3D G3DSA:3.40.630.30 59 189 2.4E-8 T 11-10-2018 XFC3_04655 7e98d9eb1aaf4e0dfb7bdbf24c7d58ba 240 SUPERFAMILY SSF55729 89 190 1.9E-11 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFC3_03680 65809369e70c623fd6c7abcaa82c46c1 365 Pfam PF00155 Aminotransferase class I and II 49 356 4.0E-51 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XFC3_03680 65809369e70c623fd6c7abcaa82c46c1 365 SUPERFAMILY SSF53383 27 360 8.6E-70 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFC3_03680 65809369e70c623fd6c7abcaa82c46c1 365 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 361 53.72 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 XFC3_03680 65809369e70c623fd6c7abcaa82c46c1 365 Gene3D G3DSA:3.90.1150.10 11 353 4.0E-117 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFC3_03680 65809369e70c623fd6c7abcaa82c46c1 365 Gene3D G3DSA:3.40.640.10 55 264 4.0E-117 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFC3_03680 65809369e70c623fd6c7abcaa82c46c1 365 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 13 360 1.0E-111 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 Pfam PF06594 Haemolysin-type calcium binding protein related domain 970 1008 5.0E-10 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 837 855 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 914 930 0.16 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 936 951 1.7 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 832 848 0.074 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 849 866 0.0025 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 814 830 9.3 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 886 902 0.15 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 867 884 0.12 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 SUPERFAMILY SSF103647 355 451 2.88E-6 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 855 873 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 SUPERFAMILY SSF51120 813 1006 2.02E-32 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 PRINTS PR00313 NodO calcium binding signature 877 885 8.2E-10 T 11-10-2018 XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 PRINTS PR00313 NodO calcium binding signature 895 903 8.2E-10 T 11-10-2018 XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 PRINTS PR00313 NodO calcium binding signature 847 858 8.2E-10 T 11-10-2018 XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 PRINTS PR00313 NodO calcium binding signature 915 924 8.2E-10 T 11-10-2018 XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 864 882 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 Gene3D G3DSA:2.150.10.10 876 1022 2.5E-36 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_02905 45847de1c7e84ebe42e4fd7e3f8e65c5 1045 Gene3D G3DSA:2.150.10.10 814 875 4.6E-17 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_03625 1a326991a6e9175a9202dd3300d823ea 396 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 40 267 6.1E-77 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 XFC3_03625 1a326991a6e9175a9202dd3300d823ea 396 SUPERFAMILY SSF69189 288 380 6.67E-25 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFC3_03625 1a326991a6e9175a9202dd3300d823ea 396 Gene3D G3DSA:2.60.410.10 288 378 7.8E-30 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFC3_03625 1a326991a6e9175a9202dd3300d823ea 396 Gene3D G3DSA:3.40.710.10 27 286 2.2E-84 T 11-10-2018 XFC3_03625 1a326991a6e9175a9202dd3300d823ea 396 SUPERFAMILY SSF56601 5 288 5.52E-79 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFC3_03625 1a326991a6e9175a9202dd3300d823ea 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 128 145 6.1E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XFC3_03625 1a326991a6e9175a9202dd3300d823ea 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 6.1E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XFC3_03625 1a326991a6e9175a9202dd3300d823ea 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 155 168 6.1E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XFC3_03625 1a326991a6e9175a9202dd3300d823ea 396 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 288 378 1.4E-24 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFC3_03625 1a326991a6e9175a9202dd3300d823ea 396 SMART SM00936 288 378 1.7E-31 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFC3_01175 d8971716fef7d5db107f52fa30ec0ece 471 SUPERFAMILY SSF51984 2 91 1.02E-16 T 11-10-2018 XFC3_01175 d8971716fef7d5db107f52fa30ec0ece 471 Pfam PF08245 Mur ligase middle domain 109 313 6.3E-24 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XFC3_01175 d8971716fef7d5db107f52fa30ec0ece 471 SUPERFAMILY SSF53623 96 330 6.8E-51 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFC3_01175 d8971716fef7d5db107f52fa30ec0ece 471 SUPERFAMILY SSF53244 333 469 2.09E-32 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFC3_01175 d8971716fef7d5db107f52fa30ec0ece 471 Pfam PF01225 Mur ligase family, catalytic domain 4 98 2.5E-13 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XFC3_01175 d8971716fef7d5db107f52fa30ec0ece 471 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 2 471 54.555 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 XFC3_01175 d8971716fef7d5db107f52fa30ec0ece 471 Gene3D G3DSA:3.90.190.20 336 471 2.0E-25 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFC3_01175 d8971716fef7d5db107f52fa30ec0ece 471 Gene3D G3DSA:3.40.50.720 1 91 9.2E-29 T 11-10-2018 XFC3_01175 d8971716fef7d5db107f52fa30ec0ece 471 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 402 3.9E-9 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XFC3_01175 d8971716fef7d5db107f52fa30ec0ece 471 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 3 471 1.1E-180 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 XFC3_01175 d8971716fef7d5db107f52fa30ec0ece 471 Gene3D G3DSA:3.40.1190.10 92 335 1.5E-59 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFC3_06985 f3ca66dd4b920d5ac0bef0ae79373ed1 391 SUPERFAMILY SSF52777 162 389 1.2E-86 T 11-10-2018 XFC3_06985 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 162 388 6.0E-83 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 XFC3_06985 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Gene3D G3DSA:4.10.320.10 112 152 3.2E-9 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XFC3_06985 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Gene3D G3DSA:2.40.50.100 1 94 1.9E-21 T 11-10-2018 XFC3_06985 f3ca66dd4b920d5ac0bef0ae79373ed1 391 SUPERFAMILY SSF51230 1 85 8.38E-25 T 11-10-2018 IPR011053 Single hybrid motif XFC3_06985 f3ca66dd4b920d5ac0bef0ae79373ed1 391 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XFC3_06985 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Pfam PF00364 Biotin-requiring enzyme 4 76 6.8E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment XFC3_06985 f3ca66dd4b920d5ac0bef0ae79373ed1 391 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 390 1.1E-181 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 XFC3_06985 f3ca66dd4b920d5ac0bef0ae79373ed1 391 SUPERFAMILY SSF47005 106 149 5.1E-8 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XFC3_06985 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Gene3D G3DSA:3.30.559.10 159 390 9.9E-95 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XFC3_06985 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Pfam PF02817 e3 binding domain 114 144 1.4E-6 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 XFC3_07410 05099fb20ddbf9fb8ee6d01e17fdc3a5 164 Pfam PF00959 Phage lysozyme 30 137 9.3E-20 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XFC3_07410 05099fb20ddbf9fb8ee6d01e17fdc3a5 164 Gene3D G3DSA:1.10.530.40 3 157 3.2E-50 T 11-10-2018 XFC3_07410 05099fb20ddbf9fb8ee6d01e17fdc3a5 164 SUPERFAMILY SSF53955 5 148 6.14E-48 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_10040 05099fb20ddbf9fb8ee6d01e17fdc3a5 164 Pfam PF00959 Phage lysozyme 30 137 9.3E-20 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XFC3_10040 05099fb20ddbf9fb8ee6d01e17fdc3a5 164 Gene3D G3DSA:1.10.530.40 3 157 3.2E-50 T 11-10-2018 XFC3_10040 05099fb20ddbf9fb8ee6d01e17fdc3a5 164 SUPERFAMILY SSF53955 5 148 6.14E-48 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_11345 05099fb20ddbf9fb8ee6d01e17fdc3a5 164 Pfam PF00959 Phage lysozyme 30 137 9.3E-20 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XFC3_11345 05099fb20ddbf9fb8ee6d01e17fdc3a5 164 Gene3D G3DSA:1.10.530.40 3 157 3.2E-50 T 11-10-2018 XFC3_11345 05099fb20ddbf9fb8ee6d01e17fdc3a5 164 SUPERFAMILY SSF53955 5 148 6.14E-48 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_01170 a9b9a226910be94b57c728fea22098f0 187 SUPERFAMILY SSF52540 1 183 5.82E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01170 a9b9a226910be94b57c728fea22098f0 187 TIGRFAM TIGR01351 adk: adenylate kinase 2 128 3.1E-50 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 XFC3_01170 a9b9a226910be94b57c728fea22098f0 187 Gene3D G3DSA:3.40.50.300 1 185 9.7E-62 T 11-10-2018 XFC3_01170 a9b9a226910be94b57c728fea22098f0 187 PRINTS PR00094 Adenylate kinase signature 32 46 1.6E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XFC3_01170 a9b9a226910be94b57c728fea22098f0 187 PRINTS PR00094 Adenylate kinase signature 81 97 1.6E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XFC3_01170 a9b9a226910be94b57c728fea22098f0 187 PRINTS PR00094 Adenylate kinase signature 4 17 1.6E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XFC3_01170 a9b9a226910be94b57c728fea22098f0 187 PRINTS PR00094 Adenylate kinase signature 133 148 1.6E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XFC3_01170 a9b9a226910be94b57c728fea22098f0 187 PRINTS PR00094 Adenylate kinase signature 150 164 1.6E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XFC3_01170 a9b9a226910be94b57c728fea22098f0 187 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XFC3_01170 a9b9a226910be94b57c728fea22098f0 187 Hamap MF_00235 Adenylate kinase [adk]. 1 186 44.606 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XFC3_01170 a9b9a226910be94b57c728fea22098f0 187 Pfam PF00406 Adenylate kinase 5 163 1.4E-53 T 11-10-2018 XFC3_07080 6bc376d0477acdc1c4103fbe362db3e6 255 ProDom PD046566 PATHWAY N GENERAL SECRETION PRECURSOR SIGNAL MEMBRANE XPSN TRANSMEMBRANE INNER 1 230 4.0E-123 T 11-10-2018 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 158 168 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 Gene3D G3DSA:3.40.50.740 226 420 1.0E-8 T 11-10-2018 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 111 123 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 SUPERFAMILY SSF50692 678 735 4.75E-10 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 SMART SM00929 96 136 3.4E-20 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 Gene3D G3DSA:2.40.40.20 654 741 2.5E-8 T 11-10-2018 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 Gene3D G3DSA:3.10.20.740 14 136 5.4E-41 T 11-10-2018 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 Gene3D G3DSA:3.40.50.740 424 653 3.5E-12 T 11-10-2018 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 Gene3D G3DSA:3.30.70.20 138 217 1.9E-7 T 11-10-2018 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 Pfam PF01568 Molydopterin dinucleotide binding domain 676 730 4.8E-9 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 Pfam PF00384 Molybdopterin oxidoreductase 285 414 2.2E-12 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 Pfam PF00384 Molybdopterin oxidoreductase 445 608 5.6E-9 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 44 61 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 SUPERFAMILY SSF54862 89 223 1.34E-36 T 11-10-2018 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 SUPERFAMILY SSF54292 15 87 8.28E-19 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 SUPERFAMILY SSF53706 226 630 2.75E-73 T 11-10-2018 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 17 607 9.4E-210 T 11-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 96 133 1.4E-16 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01350 577a820286d47e7d3453a6d2a28ecaf8 744 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 89 5.7E-19 T 11-10-2018 XFC3_05000 42691fb1d2ac0af65ca225b18ff261da 722 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 582 1.6E-187 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_05000 42691fb1d2ac0af65ca225b18ff261da 722 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 720 25.114 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_05000 42691fb1d2ac0af65ca225b18ff261da 722 SUPERFAMILY SSF109604 345 492 6.51E-14 T 11-10-2018 XFC3_05000 42691fb1d2ac0af65ca225b18ff261da 722 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 5 720 1.4E-200 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_05000 42691fb1d2ac0af65ca225b18ff261da 722 Pfam PF05746 DALR anticodon binding domain 614 709 1.0E-6 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 XFC3_05000 42691fb1d2ac0af65ca225b18ff261da 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 53 65 6.3E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_05000 42691fb1d2ac0af65ca225b18ff261da 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 320 336 6.3E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_05000 42691fb1d2ac0af65ca225b18ff261da 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 6.3E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_05000 42691fb1d2ac0af65ca225b18ff261da 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 6.3E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_05000 42691fb1d2ac0af65ca225b18ff261da 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 396 415 6.3E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_08905 3247f3e10436b8b7a5b86ae239826e77 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08905 3247f3e10436b8b7a5b86ae239826e77 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.6E-57 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 XFC3_08905 3247f3e10436b8b7a5b86ae239826e77 122 SUPERFAMILY SSF50193 1 122 1.1E-51 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 XFC3_08905 3247f3e10436b8b7a5b86ae239826e77 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.541 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 XFC3_08905 3247f3e10436b8b7a5b86ae239826e77 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 5.1E-55 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 XFC3_08905 3247f3e10436b8b7a5b86ae239826e77 122 Gene3D G3DSA:2.40.150.20 1 122 1.1E-54 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 XFC3_08905 3247f3e10436b8b7a5b86ae239826e77 122 SMART SM01374 1 122 1.4E-84 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 XFC3_09870 e09bdb673de94b4683d2723ee381473b 726 SUPERFAMILY SSF56672 186 724 4.67E-67 T 11-10-2018 XFC3_09870 e09bdb673de94b4683d2723ee381473b 726 SMART SM00482 372 690 3.3E-6 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_09870 e09bdb673de94b4683d2723ee381473b 726 Pfam PF00476 DNA polymerase family A 248 498 8.6E-11 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_09870 e09bdb673de94b4683d2723ee381473b 726 Gene3D G3DSA:3.30.70.370 373 394 2.1E-5 T 11-10-2018 XFC3_09870 e09bdb673de94b4683d2723ee381473b 726 Gene3D G3DSA:1.10.150.20 395 415 2.1E-5 T 11-10-2018 XFC3_09870 e09bdb673de94b4683d2723ee381473b 726 Gene3D G3DSA:3.30.420.10 6 193 3.9E-6 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFC3_09870 e09bdb673de94b4683d2723ee381473b 726 SUPERFAMILY SSF53098 27 182 2.87E-10 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFC3_00065 80e6fdcf35ec3a7b552ead56992b9b07 795 SUPERFAMILY SSF82171 224 538 4.84E-33 T 11-10-2018 XFC3_00065 80e6fdcf35ec3a7b552ead56992b9b07 795 Gene3D G3DSA:2.140.10.30 236 533 2.4E-29 T 11-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily XFC3_00065 80e6fdcf35ec3a7b552ead56992b9b07 795 SUPERFAMILY SSF53474 537 794 9.46E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_00065 80e6fdcf35ec3a7b552ead56992b9b07 795 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 337 507 1.1E-17 T 11-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 XFC3_00065 80e6fdcf35ec3a7b552ead56992b9b07 795 Gene3D G3DSA:3.40.50.1820 534 791 8.6E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_00065 80e6fdcf35ec3a7b552ead56992b9b07 795 Pfam PF00326 Prolyl oligopeptidase family 599 794 2.3E-42 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 XFC3_11870 9dff8cc284ddde098e80db965be55204 690 Gene3D G3DSA:3.30.70.270 259 431 1.4E-25 T 11-10-2018 XFC3_11870 9dff8cc284ddde098e80db965be55204 690 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 426 1.2E-13 T 11-10-2018 IPR000160 GGDEF domain XFC3_11870 9dff8cc284ddde098e80db965be55204 690 SUPERFAMILY SSF55073 275 433 6.12E-19 T 11-10-2018 IPR029787 Nucleotide cyclase XFC3_11870 9dff8cc284ddde098e80db965be55204 690 SMART SM00052 443 690 1.3E-27 T 11-10-2018 IPR001633 EAL domain XFC3_11870 9dff8cc284ddde098e80db965be55204 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 250 1.2E-8 T 11-10-2018 IPR000014 PAS domain XFC3_11870 9dff8cc284ddde098e80db965be55204 690 SUPERFAMILY SSF141868 449 680 1.7E-46 T 11-10-2018 IPR035919 EAL domain superfamily XFC3_11870 9dff8cc284ddde098e80db965be55204 690 SUPERFAMILY SSF52172 8 164 2.69E-7 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_11870 9dff8cc284ddde098e80db965be55204 690 Pfam PF00989 PAS fold 147 251 9.3E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 XFC3_11870 9dff8cc284ddde098e80db965be55204 690 SMART SM00267 258 431 2.0E-7 T 11-10-2018 IPR000160 GGDEF domain XFC3_11870 9dff8cc284ddde098e80db965be55204 690 Pfam PF00563 EAL domain 449 681 2.4E-51 T 11-10-2018 IPR001633 EAL domain XFC3_11870 9dff8cc284ddde098e80db965be55204 690 SMART SM00091 144 210 0.0099 T 11-10-2018 IPR000014 PAS domain XFC3_11870 9dff8cc284ddde098e80db965be55204 690 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 428 5.7E-13 T 11-10-2018 IPR000160 GGDEF domain XFC3_11870 9dff8cc284ddde098e80db965be55204 690 Gene3D G3DSA:3.20.20.450 432 690 1.0E-64 T 11-10-2018 IPR035919 EAL domain superfamily XFC3_11870 9dff8cc284ddde098e80db965be55204 690 SUPERFAMILY SSF55785 132 251 3.24E-13 T 11-10-2018 IPR035965 PAS domain superfamily XFC3_11870 9dff8cc284ddde098e80db965be55204 690 Gene3D G3DSA:3.30.450.20 131 253 2.0E-13 T 11-10-2018 XFC3_04500 70b6332b69ba095ea88dfb8d84891248 86 Pfam PF04221 RelB antitoxin 4 83 2.0E-29 T 11-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ XFC3_04500 70b6332b69ba095ea88dfb8d84891248 86 PIRSF PIRSF003108 1 86 4.5E-29 T 11-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 XFC3_04500 70b6332b69ba095ea88dfb8d84891248 86 Gene3D G3DSA:1.10.1220.10 5 78 7.2E-15 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XFC3_04500 70b6332b69ba095ea88dfb8d84891248 86 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 68 2.4E-20 T 11-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ XFC3_00180 065b1679b2064998d8e8fbecc828e287 179 Pfam PF13302 Acetyltransferase (GNAT) domain 22 160 4.5E-9 T 11-10-2018 IPR000182 GNAT domain XFC3_00180 065b1679b2064998d8e8fbecc828e287 179 SUPERFAMILY SSF55729 22 165 1.77E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFC3_00180 065b1679b2064998d8e8fbecc828e287 179 Gene3D G3DSA:3.40.630.30 13 178 3.9E-29 T 11-10-2018 XFC3_11800 62e784fc2ae8cb71aed9c1b6045eeb31 199 Pfam PF01106 NifU-like domain 116 179 1.3E-19 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 XFC3_11800 62e784fc2ae8cb71aed9c1b6045eeb31 199 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 193 35.982 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 XFC3_11800 62e784fc2ae8cb71aed9c1b6045eeb31 199 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 120 179 6.0E-28 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 XFC3_11800 62e784fc2ae8cb71aed9c1b6045eeb31 199 Gene3D G3DSA:3.30.300.130 104 188 5.3E-21 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XFC3_11800 62e784fc2ae8cb71aed9c1b6045eeb31 199 SUPERFAMILY SSF89360 1 89 1.1E-14 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFC3_11800 62e784fc2ae8cb71aed9c1b6045eeb31 199 Gene3D G3DSA:2.60.300.12 1 100 6.1E-7 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFC3_11800 62e784fc2ae8cb71aed9c1b6045eeb31 199 SUPERFAMILY SSF117916 105 186 6.54E-22 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XFC3_07555 9fa63bf630a64b004732b1b8289807d5 459 SUPERFAMILY SSF52540 11 457 2.67E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07555 9fa63bf630a64b004732b1b8289807d5 459 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 351 420 2.3E-8 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFC3_07555 9fa63bf630a64b004732b1b8289807d5 459 SMART SM01086 351 450 2.8E-27 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFC3_07555 9fa63bf630a64b004732b1b8289807d5 459 Gene3D G3DSA:1.10.8.60 351 456 5.8E-40 T 11-10-2018 XFC3_07555 9fa63bf630a64b004732b1b8289807d5 459 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 61 107 3.6E-6 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFC3_07555 9fa63bf630a64b004732b1b8289807d5 459 Pfam PF07724 AAA domain (Cdc48 subfamily) 199 345 3.8E-40 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFC3_07555 9fa63bf630a64b004732b1b8289807d5 459 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 9 459 44.062 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 XFC3_07555 9fa63bf630a64b004732b1b8289807d5 459 SMART SM00382 57 348 7.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_07555 9fa63bf630a64b004732b1b8289807d5 459 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 12 459 9.3E-202 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 XFC3_08445 18ddd1ae39eae9288ff54f90718ecbb0 168 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 23 146 2.6E-39 T 11-10-2018 IPR008769 Poly granule associated XFC3_08445 18ddd1ae39eae9288ff54f90718ecbb0 168 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 31 148 8.7E-50 T 11-10-2018 IPR008769 Poly granule associated XFC3_10860 c1618137f8cffa6a7514a9c5ee30c7a8 960 Gene3D G3DSA:3.30.830.10 741 936 1.2E-38 T 11-10-2018 XFC3_10860 c1618137f8cffa6a7514a9c5ee30c7a8 960 Gene3D G3DSA:3.30.830.10 519 731 3.9E-41 T 11-10-2018 XFC3_10860 c1618137f8cffa6a7514a9c5ee30c7a8 960 Pfam PF05193 Peptidase M16 inactive domain 684 864 3.9E-29 T 11-10-2018 IPR007863 Peptidase M16, C-terminal XFC3_10860 c1618137f8cffa6a7514a9c5ee30c7a8 960 Pfam PF05193 Peptidase M16 inactive domain 216 391 1.9E-30 T 11-10-2018 IPR007863 Peptidase M16, C-terminal XFC3_10860 c1618137f8cffa6a7514a9c5ee30c7a8 960 SUPERFAMILY SSF63411 513 731 1.31E-40 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XFC3_10860 c1618137f8cffa6a7514a9c5ee30c7a8 960 SUPERFAMILY SSF63411 745 951 2.67E-33 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XFC3_10860 c1618137f8cffa6a7514a9c5ee30c7a8 960 Gene3D G3DSA:3.30.830.10 45 267 2.2E-65 T 11-10-2018 XFC3_10860 c1618137f8cffa6a7514a9c5ee30c7a8 960 Pfam PF00675 Insulinase (Peptidase family M16) 529 649 8.1E-8 T 11-10-2018 IPR011765 Peptidase M16, N-terminal XFC3_10860 c1618137f8cffa6a7514a9c5ee30c7a8 960 Pfam PF00675 Insulinase (Peptidase family M16) 59 196 5.7E-15 T 11-10-2018 IPR011765 Peptidase M16, N-terminal XFC3_10860 c1618137f8cffa6a7514a9c5ee30c7a8 960 SUPERFAMILY SSF63411 274 457 2.83E-31 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XFC3_10860 c1618137f8cffa6a7514a9c5ee30c7a8 960 SUPERFAMILY SSF63411 44 254 3.12E-53 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XFC3_10860 c1618137f8cffa6a7514a9c5ee30c7a8 960 Gene3D G3DSA:3.30.830.10 271 468 8.2E-37 T 11-10-2018 XFC3_04770 4e8eade3139bd6cc5e072717adcdd861 215 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 5 210 3.5E-66 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 XFC3_04770 4e8eade3139bd6cc5e072717adcdd861 215 SUPERFAMILY SSF100950 2 144 2.09E-43 T 11-10-2018 IPR037171 NagB/RpiA transferase-like XFC3_04770 4e8eade3139bd6cc5e072717adcdd861 215 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 47 210 1.7E-56 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 XFC3_04770 4e8eade3139bd6cc5e072717adcdd861 215 Gene3D G3DSA:3.30.70.260 123 195 1.5E-75 T 11-10-2018 XFC3_04770 4e8eade3139bd6cc5e072717adcdd861 215 Gene3D G3DSA:3.40.50.1360 5 206 1.5E-75 T 11-10-2018 XFC3_04770 4e8eade3139bd6cc5e072717adcdd861 215 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 215 32.255 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 XFC3_04770 4e8eade3139bd6cc5e072717adcdd861 215 SUPERFAMILY SSF75445 125 197 2.49E-22 T 11-10-2018 XFC3_11275 c4645744c0d623e50745139e42ca6d50 134 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 3 131 5.5E-42 T 11-10-2018 IPR022452 Antitoxin MqsA XFC3_11275 c4645744c0d623e50745139e42ca6d50 134 SUPERFAMILY SSF47413 71 128 2.56E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_11275 c4645744c0d623e50745139e42ca6d50 134 Gene3D G3DSA:1.10.260.40 65 132 5.4E-21 T 11-10-2018 XFC3_11275 c4645744c0d623e50745139e42ca6d50 134 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 1 132 3.2E-62 T 11-10-2018 IPR032758 Antitoxin MqsA/HigA-2 XFC3_11275 c4645744c0d623e50745139e42ca6d50 134 Gene3D G3DSA:1.20.58.720 1 64 3.9E-27 T 11-10-2018 XFC3_11275 c4645744c0d623e50745139e42ca6d50 134 SMART SM00530 74 128 2.0E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_11275 c4645744c0d623e50745139e42ca6d50 134 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 48 3.6E-13 T 11-10-2018 IPR022453 Zinc finger, MqsA-type XFC3_10740 f1216a2f94f5087a89eaa0450f564f5a 891 SUPERFAMILY SSF49303 237 344 1.4E-18 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily XFC3_10740 f1216a2f94f5087a89eaa0450f564f5a 891 Gene3D G3DSA:3.20.20.80 344 697 1.2E-120 T 11-10-2018 XFC3_10740 f1216a2f94f5087a89eaa0450f564f5a 891 Gene3D G3DSA:2.60.40.10 796 882 2.3E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFC3_10740 f1216a2f94f5087a89eaa0450f564f5a 891 Pfam PF00703 Glycosyl hydrolases family 2 236 345 3.6E-9 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 XFC3_10740 f1216a2f94f5087a89eaa0450f564f5a 891 SUPERFAMILY SSF51445 343 699 4.86E-105 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFC3_10740 f1216a2f94f5087a89eaa0450f564f5a 891 SUPERFAMILY SSF49303 701 799 3.45E-10 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily XFC3_10740 f1216a2f94f5087a89eaa0450f564f5a 891 Gene3D G3DSA:2.60.120.260 35 234 2.5E-59 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFC3_10740 f1216a2f94f5087a89eaa0450f564f5a 891 SUPERFAMILY SSF49785 37 233 3.74E-47 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFC3_10740 f1216a2f94f5087a89eaa0450f564f5a 891 Gene3D G3DSA:2.60.40.10 235 343 7.4E-20 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFC3_10740 f1216a2f94f5087a89eaa0450f564f5a 891 SUPERFAMILY SSF49303 801 877 1.87E-15 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily XFC3_08560 52fca1471586ede9d14a9783498c7bde 398 Gene3D G3DSA:3.10.310.10 11 387 4.0E-141 T 11-10-2018 XFC3_08560 52fca1471586ede9d14a9783498c7bde 398 SUPERFAMILY SSF54506 4 182 8.63E-67 T 11-10-2018 XFC3_08560 52fca1471586ede9d14a9783498c7bde 398 SUPERFAMILY SSF54506 189 391 2.04E-70 T 11-10-2018 XFC3_08560 52fca1471586ede9d14a9783498c7bde 398 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 393 6.0E-230 T 11-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 XFC3_08560 52fca1471586ede9d14a9783498c7bde 398 Pfam PF04303 PrpF protein 6 390 3.8E-184 T 11-10-2018 IPR007400 PrpF protein XFC3_08560 52fca1471586ede9d14a9783498c7bde 398 Gene3D G3DSA:3.10.310.10 181 373 4.0E-141 T 11-10-2018 XFC3_12160 671fbef60b1014c8e6aec6d1a03dcc1e 113 PIRSF PIRSF000077 2 108 2.9E-36 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 XFC3_12160 671fbef60b1014c8e6aec6d1a03dcc1e 113 PRINTS PR00421 Thioredoxin family signature 72 83 3.2E-5 T 11-10-2018 XFC3_12160 671fbef60b1014c8e6aec6d1a03dcc1e 113 PRINTS PR00421 Thioredoxin family signature 32 41 3.2E-5 T 11-10-2018 XFC3_12160 671fbef60b1014c8e6aec6d1a03dcc1e 113 PRINTS PR00421 Thioredoxin family signature 24 32 3.2E-5 T 11-10-2018 XFC3_12160 671fbef60b1014c8e6aec6d1a03dcc1e 113 SUPERFAMILY SSF52833 3 109 1.3E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_12160 671fbef60b1014c8e6aec6d1a03dcc1e 113 Pfam PF00085 Thioredoxin 5 106 3.7E-28 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 XFC3_12160 671fbef60b1014c8e6aec6d1a03dcc1e 113 Gene3D G3DSA:3.40.30.10 4 112 1.0E-30 T 11-10-2018 XFC3_12160 671fbef60b1014c8e6aec6d1a03dcc1e 113 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.7E-33 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 XFC3_11580 d8b7bd498f42f9a1a158848b4393be95 833 Pfam PF00326 Prolyl oligopeptidase family 661 818 1.1E-21 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 XFC3_11580 d8b7bd498f42f9a1a158848b4393be95 833 SUPERFAMILY SSF82171 107 492 6.67E-10 T 11-10-2018 XFC3_11580 d8b7bd498f42f9a1a158848b4393be95 833 Gene3D G3DSA:3.40.50.1820 559 825 8.4E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_11580 d8b7bd498f42f9a1a158848b4393be95 833 SUPERFAMILY SSF53474 564 818 7.16E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_07655 96fcc0eed8d5941544b4af08df2db541 429 Gene3D G3DSA:1.20.1250.20 8 224 5.2E-43 T 11-10-2018 XFC3_07655 96fcc0eed8d5941544b4af08df2db541 429 Gene3D G3DSA:1.20.1250.20 231 416 4.2E-38 T 11-10-2018 XFC3_07655 96fcc0eed8d5941544b4af08df2db541 429 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 93 410 1.4E-152 T 11-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 XFC3_07655 96fcc0eed8d5941544b4af08df2db541 429 SUPERFAMILY SSF103473 10 423 1.96E-29 T 11-10-2018 IPR036259 MFS transporter superfamily XFC3_07655 96fcc0eed8d5941544b4af08df2db541 429 Pfam PF07690 Major Facilitator Superfamily 18 376 6.0E-14 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 Gene3D G3DSA:3.30.1490.20 121 190 1.2E-24 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 9.6E-165 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 SUPERFAMILY SSF52440 1 103 4.46E-35 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 41.364 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 SUPERFAMILY SSF51246 329 424 5.57E-28 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 SMART SM01210 330 423 2.9E-46 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.6E-77 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 Gene3D G3DSA:3.90.600.10 331 434 8.2E-29 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 SUPERFAMILY SSF56059 104 323 1.63E-64 T 11-10-2018 XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 Gene3D G3DSA:3.30.470.20 191 329 4.4E-57 T 11-10-2018 XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 Gene3D G3DSA:3.40.50.20 2 95 2.4E-36 T 11-10-2018 XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 8.0E-34 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 SMART SM01209 103 296 2.4E-132 T 11-10-2018 XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFC3_04940 dcef217dc25be9b1e01fdad95ef11c1e 437 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 3.1E-25 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFC3_05030 412145fc4476d0d73d1b0d60b09ef95a 680 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 461 644 9.9E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 XFC3_05030 412145fc4476d0d73d1b0d60b09ef95a 680 Gene3D G3DSA:1.10.287.950 352 679 5.9E-59 T 11-10-2018 XFC3_05030 412145fc4476d0d73d1b0d60b09ef95a 680 SMART SM00283 416 677 1.1E-82 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 XFC3_05030 412145fc4476d0d73d1b0d60b09ef95a 680 SUPERFAMILY SSF58104 379 678 1.05E-64 T 11-10-2018 XFC3_05030 412145fc4476d0d73d1b0d60b09ef95a 680 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 543 572 1.2E-18 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XFC3_05030 412145fc4476d0d73d1b0d60b09ef95a 680 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 514 541 1.2E-18 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XFC3_05030 412145fc4476d0d73d1b0d60b09ef95a 680 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 437 466 1.2E-18 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XFC3_03200 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 Gene3D G3DSA:3.40.430.10 1 166 4.7E-49 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XFC3_03200 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 PRINTS PR00070 Dihydrofolate reductase signature 14 24 2.1E-11 T 11-10-2018 XFC3_03200 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 PRINTS PR00070 Dihydrofolate reductase signature 41 52 2.1E-11 T 11-10-2018 XFC3_03200 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 PRINTS PR00070 Dihydrofolate reductase signature 28 36 2.1E-11 T 11-10-2018 XFC3_03200 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 PRINTS PR00070 Dihydrofolate reductase signature 94 108 2.1E-11 T 11-10-2018 XFC3_03200 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 Pfam PF00186 Dihydrofolate reductase 3 163 3.5E-50 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 XFC3_03200 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 PIRSF PIRSF000194 1 166 1.6E-52 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 XFC3_03200 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 11-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 XFC3_03200 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 SUPERFAMILY SSF53597 1 164 1.37E-47 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 145 2.1E-15 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 TIGRFAM TIGR01393 lepA: elongation factor 4 3 595 2.1E-293 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 Gene3D G3DSA:3.30.70.2570 480 553 2.9E-32 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 SMART SM00838 398 486 6.7E-4 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 Pfam PF00679 Elongation factor G C-terminus 399 479 8.6E-20 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.3E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 SUPERFAMILY SSF52540 2 202 1.97E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 Gene3D G3DSA:3.30.70.3380 368 478 3.1E-38 T 11-10-2018 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 1.0E-51 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 296.077 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 1.3E-51 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 SUPERFAMILY SSF50447 166 288 4.95E-27 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 Gene3D G3DSA:3.30.70.870 286 367 1.9E-36 T 11-10-2018 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 Gene3D G3DSA:3.40.50.300 1 185 3.1E-70 T 11-10-2018 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 Gene3D G3DSA:2.40.30.10 187 285 7.9E-31 T 11-10-2018 XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 SUPERFAMILY SSF54980 399 493 2.16E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like XFC3_03560 f91e89450610d2fbedc4a36b2ec3caf9 597 SUPERFAMILY SSF54980 292 370 6.83E-19 T 11-10-2018 IPR035647 EF-G domain III/V-like XFC3_03405 cbaeba04f2ae14ab80b4975ef59f4b04 426 SUPERFAMILY SSF55681 117 420 5.69E-97 T 11-10-2018 XFC3_03405 cbaeba04f2ae14ab80b4975ef59f4b04 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 38.396 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFC3_03405 cbaeba04f2ae14ab80b4975ef59f4b04 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 225 402 3.3E-33 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_03405 cbaeba04f2ae14ab80b4975ef59f4b04 426 Gene3D G3DSA:1.10.287.40 1 105 6.6E-15 T 11-10-2018 XFC3_03405 cbaeba04f2ae14ab80b4975ef59f4b04 426 PIRSF PIRSF001529 1 426 3.8E-164 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFC3_03405 cbaeba04f2ae14ab80b4975ef59f4b04 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 5.9E-28 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 XFC3_03405 cbaeba04f2ae14ab80b4975ef59f4b04 426 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 3.7E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFC3_03405 cbaeba04f2ae14ab80b4975ef59f4b04 426 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 3.7E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFC3_03405 cbaeba04f2ae14ab80b4975ef59f4b04 426 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 3.7E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFC3_03405 cbaeba04f2ae14ab80b4975ef59f4b04 426 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 3.7E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFC3_03405 cbaeba04f2ae14ab80b4975ef59f4b04 426 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 3.7E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFC3_03405 cbaeba04f2ae14ab80b4975ef59f4b04 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 1.9E-159 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFC3_03405 cbaeba04f2ae14ab80b4975ef59f4b04 426 Gene3D G3DSA:3.30.930.10 106 425 1.1E-114 T 11-10-2018 XFC3_03405 cbaeba04f2ae14ab80b4975ef59f4b04 426 SUPERFAMILY SSF46589 1 113 1.26E-23 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 SUPERFAMILY SSF51120 1434 1616 1.83E-26 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1520 1535 0.32 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1175 1191 1.3 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1031 1046 31.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1325 1340 0.92 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 962 979 5.1E-4 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1197 1212 58.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1295 1311 3.5 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1672 1684 26.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 981 997 0.12 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1630 1646 5.6 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 945 961 0.061 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1009 1025 0.11 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1471 1488 0.13 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1138 1154 9.8 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1120 1136 0.15 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1690 1705 26.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1490 1506 0.46 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1435 1452 0.36 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1454 1470 0.25 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 927 943 33.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 SUPERFAMILY SSF51120 1285 1423 3.14E-18 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1724 1763 3.6E-10 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1231 1276 3.6E-13 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1065 1109 7.4E-11 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1575 1619 6.0E-11 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1381 1425 2.4E-8 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 SUPERFAMILY SSF103647 452 550 4.32E-6 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 PRINTS PR00313 NodO calcium binding signature 972 980 1.0E-9 T 11-10-2018 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 PRINTS PR00313 NodO calcium binding signature 1156 1165 1.0E-9 T 11-10-2018 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 PRINTS PR00313 NodO calcium binding signature 990 998 1.0E-9 T 11-10-2018 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 PRINTS PR00313 NodO calcium binding signature 960 971 1.0E-9 T 11-10-2018 XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 SUPERFAMILY SSF51120 927 1109 2.39E-28 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Gene3D G3DSA:2.150.10.10 901 979 9.5E-16 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Gene3D G3DSA:2.150.10.10 1627 1776 2.4E-35 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Gene3D G3DSA:2.150.10.10 1169 1280 1.5E-20 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Gene3D G3DSA:2.150.10.10 1283 1423 6.4E-27 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Gene3D G3DSA:2.150.10.10 980 1111 3.1E-26 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Gene3D G3DSA:2.150.10.10 1476 1624 5.8E-29 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 SUPERFAMILY SSF51120 1118 1274 1.09E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1125 1143 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Gene3D G3DSA:2.150.10.10 1112 1168 8.1E-10 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 959 977 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 Gene3D G3DSA:2.150.10.10 1424 1475 1.6E-8 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_09490 3241d4fc2074397607ffa7ba42151608 1799 SUPERFAMILY SSF51120 1629 1759 6.28E-18 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_11770 99c542f6c70ff8a2f9a04947caacb3cb 335 SUPERFAMILY SSF53659 1 335 5.95E-124 T 11-10-2018 XFC3_11770 99c542f6c70ff8a2f9a04947caacb3cb 335 SMART SM01329 4 331 1.3E-180 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XFC3_11770 99c542f6c70ff8a2f9a04947caacb3cb 335 Gene3D G3DSA:3.40.718.10 1 335 2.5E-141 T 11-10-2018 XFC3_11770 99c542f6c70ff8a2f9a04947caacb3cb 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 XFC3_11770 99c542f6c70ff8a2f9a04947caacb3cb 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 331 8.5E-107 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XFC3_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 300 9.5E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFC3_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 5.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 5.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 415 5.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 Pfam PF08521 Two-component sensor kinase N-terminal 26 166 5.7E-37 T 11-10-2018 IPR013727 Two-component sensor kinase, N-terminal XFC3_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 456 1.1E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 Gene3D G3DSA:1.10.287.130 194 308 5.2E-15 T 11-10-2018 XFC3_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 SMART SM00387 352 459 4.3E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 SMART SM00388 242 307 9.5E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFC3_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 Gene3D G3DSA:3.30.565.10 311 459 2.9E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 SUPERFAMILY SSF47384 225 300 5.89E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFC3_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 SUPERFAMILY SSF55874 312 458 7.33E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_09000 e4a57c3d2adef3a4bec4f135f466dfc1 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 1.0E-39 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_09000 e4a57c3d2adef3a4bec4f135f466dfc1 140 SUPERFAMILY SSF46604 88 135 5.49E-10 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_09000 e4a57c3d2adef3a4bec4f135f466dfc1 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 87 131 3.2E-8 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain XFC3_09000 e4a57c3d2adef3a4bec4f135f466dfc1 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 132 1.1E-42 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_09000 e4a57c3d2adef3a4bec4f135f466dfc1 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 3.1E-28 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_09000 e4a57c3d2adef3a4bec4f135f466dfc1 140 SUPERFAMILY SSF51344 3 85 3.66E-23 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_09000 e4a57c3d2adef3a4bec4f135f466dfc1 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 19.72 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_09000 e4a57c3d2adef3a4bec4f135f466dfc1 140 Gene3D G3DSA:2.60.15.10 1 138 8.6E-37 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 2.0E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 778 822 1.2E-15 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 2.4E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 827 873 1.1E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 584 9.6E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 3.3E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 873 0.0 T 11-10-2018 XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 SMART SM00434 11 498 1.8E-275 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 Gene3D G3DSA:3.90.199.10 33 520 2.6E-223 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 875 23.991 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 SUPERFAMILY SSF56719 30 520 2.75E-178 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 SUPERFAMILY SSF101904 532 881 3.66E-103 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 8.8E-154 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 Gene3D G3DSA:1.10.268.10 369 492 2.6E-223 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XFC3_11585 04308cb7c7ed0b5f805c5fefa02777eb 893 Gene3D G3DSA:3.30.1360.40 236 332 2.6E-223 T 11-10-2018 XFC3_11575 b4328b7dcae3fd8a78a7c21829badbf1 581 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 233 545 6.6E-103 T 11-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal XFC3_11575 b4328b7dcae3fd8a78a7c21829badbf1 581 Gene3D G3DSA:2.40.160.50 202 581 7.2E-93 T 11-10-2018 XFC3_11575 b4328b7dcae3fd8a78a7c21829badbf1 581 Pfam PF08479 POTRA domain, ShlB-type 90 169 6.1E-23 T 11-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type XFC3_11575 b4328b7dcae3fd8a78a7c21829badbf1 581 PIRSF PIRSF029745 11 581 7.1E-146 T 11-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 XFC3_11575 b4328b7dcae3fd8a78a7c21829badbf1 581 Pfam PF17287 POTRA domain 171 224 2.0E-20 T 11-10-2018 IPR035251 ShlB, POTRA domain XFC3_12210 d7788bc14c6d9088441ec120a33e3b87 284 PIRSF PIRSF000193 10 278 1.1E-72 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XFC3_12210 d7788bc14c6d9088441ec120a33e3b87 284 SUPERFAMILY SSF51735 13 168 2.45E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_12210 d7788bc14c6d9088441ec120a33e3b87 284 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 11 275 25.938 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XFC3_12210 d7788bc14c6d9088441ec120a33e3b87 284 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 13 107 1.9E-15 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal XFC3_12210 d7788bc14c6d9088441ec120a33e3b87 284 Gene3D G3DSA:3.40.50.720 11 172 6.9E-46 T 11-10-2018 XFC3_12210 d7788bc14c6d9088441ec120a33e3b87 284 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 171 275 1.4E-33 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XFC3_12210 d7788bc14c6d9088441ec120a33e3b87 284 Gene3D G3DSA:1.10.3730.10 173 279 1.8E-37 T 11-10-2018 XFC3_12210 d7788bc14c6d9088441ec120a33e3b87 284 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 13 275 9.7E-88 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XFC3_12210 d7788bc14c6d9088441ec120a33e3b87 284 SUPERFAMILY SSF48179 170 277 7.31E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1295 1333 3.6E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 626 664 3.6E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1687 1726 8.6E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1169 1209 4.1E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 403 441 3.2E-9 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 278 318 7.5E-6 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 723 763 4.1E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1561 1601 1.5E-13 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 500 540 4.1E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 849 887 3.6E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1072 1110 3.6E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 946 986 4.1E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1829 1864 8.7E-7 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1943 1975 1.1E-9 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1392 1432 4.1E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:1.20.5.170 631 674 1.8E-8 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:1.20.5.170 1077 1120 1.8E-8 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:1.20.5.170 408 451 1.5E-7 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:1.20.5.170 1300 1343 1.8E-8 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:1.20.5.170 854 897 1.8E-8 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 SUPERFAMILY SSF101967 1206 1319 6.41E-9 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 SUPERFAMILY SSF101967 1734 1852 3.53E-15 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:3.30.1300.30 1981 2058 3.0E-28 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 SUPERFAMILY SSF101967 1597 1708 9.29E-11 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 SUPERFAMILY SSF101967 1885 1964 6.54E-23 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 SUPERFAMILY SSF101967 537 650 5.49E-9 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:2.150.10.10 1874 1973 1.2E-26 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 SUPERFAMILY SSF101967 1470 1584 4.97E-10 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1765 1791 8.8E-7 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05658 Head domain of trimeric autotransporter adhesin 161 187 4.1E-5 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1887 1911 2.1E-5 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 SUPERFAMILY SSF101967 109 299 5.49E-14 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Pfam PF03895 YadA-like membrane anchor domain 1998 2058 1.9E-16 T 11-10-2018 IPR005594 YadA-like, C-terminal XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:2.150.10.10 1728 1873 1.6E-24 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:3.30.390.90 368 407 1.2E-10 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:3.30.390.90 1036 1076 1.2E-11 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:3.30.390.90 1654 1691 8.4E-12 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:3.30.390.90 1522 1566 1.3E-7 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:3.30.390.90 590 630 1.2E-11 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:3.30.390.90 813 853 1.2E-11 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:3.30.390.90 1259 1299 1.2E-11 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:2.150.10.10 106 298 1.2E-21 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 SUPERFAMILY SSF54523 1954 2058 1.18E-22 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 SUPERFAMILY SSF101967 983 1096 6.41E-9 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 SUPERFAMILY SSF101967 306 427 6.54E-11 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:2.20.25.490 964 1023 4.4E-16 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:2.20.25.490 518 577 4.4E-16 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:2.20.25.490 741 800 4.4E-16 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:2.20.25.490 299 354 2.6E-16 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:2.20.25.490 1410 1469 7.3E-17 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:2.20.25.490 1187 1246 4.4E-16 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 Gene3D G3DSA:2.20.25.490 1579 1638 5.2E-16 T 11-10-2018 XFC3_07070 dd04f2dbacd27bf67cc1940a67f9563f 2058 SUPERFAMILY SSF101967 760 873 6.41E-9 T 11-10-2018 XFC3_02035 da7b87131828d10b54384de4cb533495 690 Gene3D G3DSA:1.10.730.10 378 536 1.0E-30 T 11-10-2018 XFC3_02035 da7b87131828d10b54384de4cb533495 690 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_02035 da7b87131828d10b54384de4cb533495 690 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 566 689 1.5E-37 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFC3_02035 da7b87131828d10b54384de4cb533495 690 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 545 38.46 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFC3_02035 da7b87131828d10b54384de4cb533495 690 Pfam PF09334 tRNA synthetases class I (M) 5 394 1.5E-148 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_02035 da7b87131828d10b54384de4cb533495 690 SUPERFAMILY SSF50249 583 689 1.22E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_02035 da7b87131828d10b54384de4cb533495 690 Gene3D G3DSA:2.40.50.140 577 689 5.5E-29 T 11-10-2018 XFC3_02035 da7b87131828d10b54384de4cb533495 690 SUPERFAMILY SSF52374 4 382 8.21E-88 T 11-10-2018 XFC3_02035 da7b87131828d10b54384de4cb533495 690 Gene3D G3DSA:3.40.50.620 5 377 2.9E-142 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_02035 da7b87131828d10b54384de4cb533495 690 SUPERFAMILY SSF57770 138 172 1.83E-12 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFC3_02035 da7b87131828d10b54384de4cb533495 690 Pfam PF01588 Putative tRNA binding domain 593 687 3.5E-20 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 XFC3_02035 da7b87131828d10b54384de4cb533495 690 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 535 6.9E-160 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFC3_02035 da7b87131828d10b54384de4cb533495 690 SUPERFAMILY SSF47323 387 547 1.66E-38 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_02035 da7b87131828d10b54384de4cb533495 690 Gene3D G3DSA:2.20.28.20 138 172 2.9E-142 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFC3_02035 da7b87131828d10b54384de4cb533495 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 2.7E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFC3_02035 da7b87131828d10b54384de4cb533495 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 2.7E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFC3_02035 da7b87131828d10b54384de4cb533495 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 86 97 2.7E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFC3_02035 da7b87131828d10b54384de4cb533495 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 249 260 2.7E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFC3_02035 da7b87131828d10b54384de4cb533495 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 38 52 2.7E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFC3_02035 da7b87131828d10b54384de4cb533495 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 288 303 2.7E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFC3_03450 fe3e4d84a22bf0d4d9608af96dee8434 236 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 19 195 33.557 T 11-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 XFC3_03450 fe3e4d84a22bf0d4d9608af96dee8434 236 Pfam PF02677 Uncharacterized BCR, COG1636 19 193 3.9E-64 T 11-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 XFC3_01415 67c262cd6439754da0ae5dab7297e07b 346 Pfam PF13531 Bacterial extracellular solute-binding protein 51 294 1.1E-16 T 11-10-2018 XFC3_01415 67c262cd6439754da0ae5dab7297e07b 346 SUPERFAMILY SSF53850 37 306 3.65E-41 T 11-10-2018 XFC3_01415 67c262cd6439754da0ae5dab7297e07b 346 Gene3D G3DSA:3.40.190.10 36 326 3.0E-113 T 11-10-2018 XFC3_01415 67c262cd6439754da0ae5dab7297e07b 346 Gene3D G3DSA:3.40.190.10 134 339 3.0E-113 T 11-10-2018 XFC3_06085 125b2a35c64a74934240b0043c42d2b7 608 Gene3D G3DSA:3.30.300.150 475 588 5.4E-15 T 11-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_06085 125b2a35c64a74934240b0043c42d2b7 608 SUPERFAMILY SSF52540 34 223 2.17E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_06085 125b2a35c64a74934240b0043c42d2b7 608 Gene3D G3DSA:1.20.272.10 242 359 2.5E-35 T 11-10-2018 XFC3_06085 125b2a35c64a74934240b0043c42d2b7 608 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 361 4.0E-25 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 XFC3_06085 125b2a35c64a74934240b0043c42d2b7 608 SMART SM00382 37 188 1.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_06085 125b2a35c64a74934240b0043c42d2b7 608 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 484 603 1.3E-11 T 11-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_06085 125b2a35c64a74934240b0043c42d2b7 608 Gene3D G3DSA:1.10.8.60 8 239 1.5E-101 T 11-10-2018 XFC3_06085 125b2a35c64a74934240b0043c42d2b7 608 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.5E-5 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFC3_06085 125b2a35c64a74934240b0043c42d2b7 608 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.5E-5 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFC3_06085 125b2a35c64a74934240b0043c42d2b7 608 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 353 1.2E-126 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 XFC3_06085 125b2a35c64a74934240b0043c42d2b7 608 Pfam PF13177 DNA polymerase III, delta subunit 20 178 3.6E-45 T 11-10-2018 XFC3_06085 125b2a35c64a74934240b0043c42d2b7 608 SUPERFAMILY SSF48019 243 363 6.46E-29 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 XFC3_06085 125b2a35c64a74934240b0043c42d2b7 608 Gene3D G3DSA:3.40.50.300 13 177 1.5E-101 T 11-10-2018 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 Gene3D G3DSA:1.10.1440.20 600 660 1.2E-21 T 11-10-2018 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 Pfam PF00694 Aconitase C-terminal domain 700 830 1.3E-43 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 277 290 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 168 176 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 291 304 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 144 157 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 439 450 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 215 230 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 371 385 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 201 214 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 501 514 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 17 902 0.0 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 Gene3D G3DSA:3.20.19.10 661 903 3.7E-100 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 Pfam PF00330 Aconitase family (aconitate hydratase) 67 570 6.4E-178 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 SUPERFAMILY SSF52016 639 901 4.91E-85 T 11-10-2018 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 ProSitePatterns PS01244 Aconitase family signature 2. 501 514 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 Gene3D G3DSA:3.30.499.10 372 598 8.3E-99 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 SUPERFAMILY SSF53732 3 633 2.22E-222 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 ProSitePatterns PS00450 Aconitase family signature 1. 435 451 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XFC3_01230 e7c3c96ffbecccce8e510feeb1bc215c 908 Gene3D G3DSA:3.30.499.20 4 371 3.7E-158 T 11-10-2018 XFC3_10855 7e5e4ef7c31e5493d1697d62628d30dd 524 Gene3D G3DSA:2.60.40.290 439 524 2.0E-16 T 11-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 XFC3_10855 7e5e4ef7c31e5493d1697d62628d30dd 524 SUPERFAMILY SSF51445 24 372 3.74E-75 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFC3_10855 7e5e4ef7c31e5493d1697d62628d30dd 524 Gene3D G3DSA:3.20.20.80 22 370 7.4E-116 T 11-10-2018 XFC3_10855 7e5e4ef7c31e5493d1697d62628d30dd 524 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 174 183 - T 11-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 XFC3_10855 7e5e4ef7c31e5493d1697d62628d30dd 524 Pfam PF00553 Cellulose binding domain 447 523 1.3E-14 T 11-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 XFC3_10855 7e5e4ef7c31e5493d1697d62628d30dd 524 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 36 343 1.3E-53 T 11-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 XFC3_10855 7e5e4ef7c31e5493d1697d62628d30dd 524 SUPERFAMILY SSF49384 440 523 9.77E-20 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 XFC3_10855 7e5e4ef7c31e5493d1697d62628d30dd 524 SMART SM00637 444 523 3.6E-16 T 11-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 XFC3_07530 3fb5a401680a5988dee22276b2d8953b 739 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 117 479 4.2E-64 T 11-10-2018 IPR010090 Phage tail tape measure protein XFC3_07530 3fb5a401680a5988dee22276b2d8953b 739 Pfam PF10145 Phage-related minor tail protein 162 373 2.4E-31 T 11-10-2018 IPR010090 Phage tail tape measure protein XFC3_09920 3fb5a401680a5988dee22276b2d8953b 739 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 117 479 4.2E-64 T 11-10-2018 IPR010090 Phage tail tape measure protein XFC3_09920 3fb5a401680a5988dee22276b2d8953b 739 Pfam PF10145 Phage-related minor tail protein 162 373 2.4E-31 T 11-10-2018 IPR010090 Phage tail tape measure protein XFC3_11230 3fb5a401680a5988dee22276b2d8953b 739 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 117 479 4.2E-64 T 11-10-2018 IPR010090 Phage tail tape measure protein XFC3_11230 3fb5a401680a5988dee22276b2d8953b 739 Pfam PF10145 Phage-related minor tail protein 162 373 2.4E-31 T 11-10-2018 IPR010090 Phage tail tape measure protein XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 Gene3D G3DSA:1.10.8.60 270 341 4.9E-20 T 11-10-2018 XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 SUPERFAMILY SSF48295 336 438 2.88E-34 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 436 3.3E-162 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 Pfam PF00308 Bacterial dnaA protein 103 321 2.4E-85 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 Gene3D G3DSA:1.10.1750.10 346 439 2.3E-33 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 350 416 1.6E-29 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 SMART SM00760 347 416 1.3E-39 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 ProSitePatterns PS01008 DnaA protein signature. 397 416 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 SMART SM00382 136 267 6.8E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 Gene3D G3DSA:3.40.50.300 94 268 6.5E-45 T 11-10-2018 XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 397 416 1.1E-46 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 235 262 1.1E-46 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 169 183 1.1E-46 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 201 215 1.1E-46 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 137 157 1.1E-46 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 Gene3D G3DSA:3.30.300.180 1 93 8.4E-20 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 438 32.07 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 Pfam PF11638 DnaA N-terminal domain 1 62 6.7E-14 T 11-10-2018 IPR024633 DnaA N-terminal domain XFC3_00005 6853aafa11c9c34fe0ff32b22a471166 439 SUPERFAMILY SSF52540 104 315 1.24E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 Gene3D G3DSA:3.30.2090.10 178 269 6.9E-267 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 Gene3D G3DSA:3.30.70.1440 657 853 6.9E-267 T 11-10-2018 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 SUPERFAMILY SSF82866 795 1014 5.1E-40 T 11-10-2018 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 Gene3D G3DSA:3.30.2090.10 708 796 6.9E-267 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 Gene3D G3DSA:3.30.70.1430 559 656 6.9E-267 T 11-10-2018 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 SUPERFAMILY SSF82693 135 324 2.62E-21 T 11-10-2018 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 SUPERFAMILY SSF82714 182 265 1.57E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 Pfam PF00873 AcrB/AcrD/AcrF family 6 1014 4.0E-279 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 Gene3D G3DSA:1.20.1640.10 10 504 6.9E-267 T 11-10-2018 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 Gene3D G3DSA:3.30.70.1320 134 326 6.9E-267 T 11-10-2018 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 SUPERFAMILY SSF82714 712 791 2.22E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 Gene3D G3DSA:1.20.1640.10 505 1011 6.9E-267 T 11-10-2018 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 Gene3D G3DSA:3.30.70.1430 40 804 6.9E-267 T 11-10-2018 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 SUPERFAMILY SSF82693 40 134 4.19E-22 T 11-10-2018 XFC3_02990 f66cda80cdbe5bcbe7372723c5e86412 1034 SUPERFAMILY SSF82866 290 489 3.01E-44 T 11-10-2018 XFC3_07120 9cb1c1b2e725c3ec4143f06f75daaa54 405 Gene3D G3DSA:1.20.81.30 260 366 1.0E-25 T 11-10-2018 XFC3_07120 9cb1c1b2e725c3ec4143f06f75daaa54 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 XFC3_07120 9cb1c1b2e725c3ec4143f06f75daaa54 405 Gene3D G3DSA:1.20.81.30 58 173 1.5E-24 T 11-10-2018 XFC3_07120 9cb1c1b2e725c3ec4143f06f75daaa54 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 9.7E-21 T 11-10-2018 IPR003004 GspF/PilC family XFC3_07120 9cb1c1b2e725c3ec4143f06f75daaa54 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 9.7E-21 T 11-10-2018 IPR003004 GspF/PilC family XFC3_07120 9cb1c1b2e725c3ec4143f06f75daaa54 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 9.7E-21 T 11-10-2018 IPR003004 GspF/PilC family XFC3_07120 9cb1c1b2e725c3ec4143f06f75daaa54 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 9.7E-21 T 11-10-2018 IPR003004 GspF/PilC family XFC3_07120 9cb1c1b2e725c3ec4143f06f75daaa54 405 Pfam PF00482 Type II secretion system (T2SS), protein F 275 396 1.1E-25 T 11-10-2018 IPR018076 Type II secretion system F domain XFC3_07120 9cb1c1b2e725c3ec4143f06f75daaa54 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.1E-29 T 11-10-2018 IPR018076 Type II secretion system F domain XFC3_09595 79ca9740c8f7873b0aa87ebb5e3967c9 449 SUPERFAMILY SSF51556 55 377 1.54E-88 T 11-10-2018 IPR032466 Metal-dependent hydrolase XFC3_09595 79ca9740c8f7873b0aa87ebb5e3967c9 449 ProSitePatterns PS00483 Dihydroorotase signature 2. 313 324 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09595 79ca9740c8f7873b0aa87ebb5e3967c9 449 Gene3D G3DSA:2.30.40.10 6 431 3.4E-132 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XFC3_09595 79ca9740c8f7873b0aa87ebb5e3967c9 449 Pfam PF01979 Amidohydrolase family 52 429 2.9E-17 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 XFC3_09595 79ca9740c8f7873b0aa87ebb5e3967c9 449 SUPERFAMILY SSF51338 1 440 9.73E-29 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XFC3_09595 79ca9740c8f7873b0aa87ebb5e3967c9 449 Gene3D G3DSA:3.20.20.140 56 416 3.4E-132 T 11-10-2018 XFC3_09860 3a99c7e763c0ec9cb81a2c19b563f76a 188 SUPERFAMILY SSF50249 6 169 3.94E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_09860 3a99c7e763c0ec9cb81a2c19b563f76a 188 Gene3D G3DSA:2.40.50.140 1 172 1.0E-48 T 11-10-2018 XFC3_09860 3a99c7e763c0ec9cb81a2c19b563f76a 188 Pfam PF10991 Protein of unknown function (DUF2815) 2 173 2.5E-48 T 11-10-2018 IPR022595 Protein of unknown function DUF2815 XFC3_12230 2743b3618df8b897ea0034b399952f40 296 SUPERFAMILY SSF51735 1 248 2.1E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_12230 2743b3618df8b897ea0034b399952f40 296 Gene3D G3DSA:3.40.50.720 1 287 1.8E-67 T 11-10-2018 XFC3_12230 2743b3618df8b897ea0034b399952f40 296 Pfam PF00106 short chain dehydrogenase 7 213 2.8E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_12230 2743b3618df8b897ea0034b399952f40 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.2E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_12230 2743b3618df8b897ea0034b399952f40 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.2E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_12230 2743b3618df8b897ea0034b399952f40 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 5.2E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_12230 2743b3618df8b897ea0034b399952f40 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 5.2E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00605 82474f7150e99e3f9c543ac9e2fdfb4b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00605 82474f7150e99e3f9c543ac9e2fdfb4b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00605 82474f7150e99e3f9c543ac9e2fdfb4b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00605 82474f7150e99e3f9c543ac9e2fdfb4b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00605 82474f7150e99e3f9c543ac9e2fdfb4b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00605 82474f7150e99e3f9c543ac9e2fdfb4b 253 Gene3D G3DSA:3.40.50.720 2 236 1.5E-59 T 11-10-2018 XFC3_00605 82474f7150e99e3f9c543ac9e2fdfb4b 253 Pfam PF00106 short chain dehydrogenase 3 187 6.9E-51 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00605 82474f7150e99e3f9c543ac9e2fdfb4b 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 0.0063 T 11-10-2018 XFC3_00605 82474f7150e99e3f9c543ac9e2fdfb4b 253 SUPERFAMILY SSF51735 3 225 6.52E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_00605 82474f7150e99e3f9c543ac9e2fdfb4b 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XFC3_00605 82474f7150e99e3f9c543ac9e2fdfb4b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 2.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00605 82474f7150e99e3f9c543ac9e2fdfb4b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 2.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00605 82474f7150e99e3f9c543ac9e2fdfb4b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 2.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_10395 50e4f7a320d4382ab3b65af770369c1b 103 Gene3D G3DSA:2.160.10.10 2 100 2.8E-10 T 11-10-2018 XFC3_10395 50e4f7a320d4382ab3b65af770369c1b 103 SUPERFAMILY SSF51161 19 87 4.71E-11 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFC3_11980 671fd682251bdb778bce0ecb87c126d4 319 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 7 318 47.857 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 XFC3_11980 671fd682251bdb778bce0ecb87c126d4 319 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 7 124 1.5E-44 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 XFC3_11980 671fd682251bdb778bce0ecb87c126d4 319 Gene3D G3DSA:3.40.50.2020 151 294 5.6E-126 T 11-10-2018 XFC3_11980 671fd682251bdb778bce0ecb87c126d4 319 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 XFC3_11980 671fd682251bdb778bce0ecb87c126d4 319 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 317 7.1E-29 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 XFC3_11980 671fd682251bdb778bce0ecb87c126d4 319 Gene3D G3DSA:3.40.50.2020 10 306 5.6E-126 T 11-10-2018 XFC3_11980 671fd682251bdb778bce0ecb87c126d4 319 SMART SM01400 7 124 6.3E-66 T 11-10-2018 XFC3_11980 671fd682251bdb778bce0ecb87c126d4 319 SUPERFAMILY SSF53271 72 307 5.35E-60 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like XFC3_11980 671fd682251bdb778bce0ecb87c126d4 319 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 8 317 4.7E-116 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 XFC3_11830 f933b35cc707c646ad9df731d6fadaf1 257 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 256 31.839 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 XFC3_11830 f933b35cc707c646ad9df731d6fadaf1 257 Gene3D G3DSA:3.30.70.100 1 95 2.0E-28 T 11-10-2018 XFC3_11830 f933b35cc707c646ad9df731d6fadaf1 257 SUPERFAMILY SSF52821 102 234 3.02E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFC3_11830 f933b35cc707c646ad9df731d6fadaf1 257 Gene3D G3DSA:3.40.250.10 100 251 2.5E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFC3_11830 f933b35cc707c646ad9df731d6fadaf1 257 SMART SM00450 118 219 6.6E-9 T 11-10-2018 IPR001763 Rhodanese-like domain XFC3_01470 c09967578f73f4f6dacbaea355d09ba6 173 Pfam PF02600 Disulfide bond formation protein DsbB 9 160 2.6E-37 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 XFC3_01470 c09967578f73f4f6dacbaea355d09ba6 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 4 168 21.101 T 11-10-2018 IPR022920 Disulphide bond formation protein DsbB XFC3_01470 c09967578f73f4f6dacbaea355d09ba6 173 SUPERFAMILY SSF158442 13 160 3.01E-38 T 11-10-2018 IPR023380 DsbB-like superfamily XFC3_01470 c09967578f73f4f6dacbaea355d09ba6 173 Gene3D G3DSA:1.20.1550.10 4 173 9.4E-45 T 11-10-2018 IPR023380 DsbB-like superfamily XFC3_09110 3832b229c90ce6c4c4fe66a2b2c71000 290 Gene3D G3DSA:3.90.226.10 11 229 6.6E-77 T 11-10-2018 XFC3_09110 3832b229c90ce6c4c4fe66a2b2c71000 290 SUPERFAMILY SSF52096 66 257 1.19E-35 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFC3_09110 3832b229c90ce6c4c4fe66a2b2c71000 290 Pfam PF00378 Enoyl-CoA hydratase/isomerase 69 214 3.0E-20 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 XFC3_09220 7414c6ba988250b4d06088241ad3a03f 339 SUPERFAMILY SSF52540 54 198 5.42E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_09220 7414c6ba988250b4d06088241ad3a03f 339 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 34 319 9.6E-65 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 XFC3_09220 7414c6ba988250b4d06088241ad3a03f 339 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 8 338 36.009 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 XFC3_09220 7414c6ba988250b4d06088241ad3a03f 339 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 22 333 1.4E-99 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 XFC3_10805 048f013f30ff1dc46c677f4fd3dbcd12 319 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 XFC3_10805 048f013f30ff1dc46c677f4fd3dbcd12 319 Gene3D G3DSA:3.40.50.1100 37 155 2.5E-112 T 11-10-2018 XFC3_10805 048f013f30ff1dc46c677f4fd3dbcd12 319 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 303 2.1E-136 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 XFC3_10805 048f013f30ff1dc46c677f4fd3dbcd12 319 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 303 3.7E-127 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 XFC3_10805 048f013f30ff1dc46c677f4fd3dbcd12 319 SUPERFAMILY SSF53686 1 305 1.83E-92 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XFC3_10805 048f013f30ff1dc46c677f4fd3dbcd12 319 Gene3D G3DSA:3.40.50.1100 7 300 2.5E-112 T 11-10-2018 XFC3_10805 048f013f30ff1dc46c677f4fd3dbcd12 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 291 3.5E-62 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XFC3_12255 62c0a3ace8927af3e617e1a8eccc95c7 1023 Pfam PF04851 Type III restriction enzyme, res subunit 295 493 4.7E-12 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XFC3_12255 62c0a3ace8927af3e617e1a8eccc95c7 1023 SUPERFAMILY SSF52540 277 499 2.2E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_12255 62c0a3ace8927af3e617e1a8eccc95c7 1023 SMART SM00487 290 517 1.0E-11 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_12255 62c0a3ace8927af3e617e1a8eccc95c7 1023 Gene3D G3DSA:3.40.50.300 293 453 4.7E-24 T 11-10-2018 XFC3_12255 62c0a3ace8927af3e617e1a8eccc95c7 1023 Gene3D G3DSA:3.90.1570.50 119 278 3.9E-8 T 11-10-2018 XFC3_12255 62c0a3ace8927af3e617e1a8eccc95c7 1023 Gene3D G3DSA:3.40.50.300 633 746 2.3E-20 T 11-10-2018 XFC3_12255 62c0a3ace8927af3e617e1a8eccc95c7 1023 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 135 223 3.3E-15 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 XFC3_12255 62c0a3ace8927af3e617e1a8eccc95c7 1023 SUPERFAMILY SSF52540 315 748 7.77E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 SUPERFAMILY SSF50621 228 357 3.49E-42 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 SMART SM01005 233 356 2.6E-57 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 Hamap MF_01201 Alanine racemase. 1 356 33.524 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 191 218 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 60 78 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 120 132 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 287 304 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 25 41 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 249 264 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 154 165 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 266 281 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 1.6E-69 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 Pfam PF00842 Alanine racemase, C-terminal domain 233 355 1.6E-36 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 Gene3D G3DSA:2.40.37.10 8 353 1.6E-123 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 SUPERFAMILY SSF51419 8 234 1.44E-70 T 11-10-2018 IPR029066 PLP-binding barrel XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 Gene3D G3DSA:3.20.20.10 10 216 1.6E-123 T 11-10-2018 IPR029066 PLP-binding barrel XFC3_10715 12a7c3a04e4365a3349e73d067a16585 362 TIGRFAM TIGR00492 alr: alanine racemase 3 356 1.2E-102 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFC3_08190 57e83c759f84f990edae38d999f94876 180 SUPERFAMILY SSF52540 5 165 8.6E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08190 57e83c759f84f990edae38d999f94876 180 Gene3D G3DSA:3.40.50.300 4 179 5.1E-52 T 11-10-2018 XFC3_08190 57e83c759f84f990edae38d999f94876 180 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XFC3_08190 57e83c759f84f990edae38d999f94876 180 Pfam PF01202 Shikimate kinase 13 166 1.2E-48 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XFC3_08190 57e83c759f84f990edae38d999f94876 180 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 27.958 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XFC3_08190 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 98 115 1.7E-21 T 11-10-2018 XFC3_08190 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 77 86 1.7E-21 T 11-10-2018 XFC3_08190 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 7 22 1.7E-21 T 11-10-2018 XFC3_08190 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 59 67 1.7E-21 T 11-10-2018 XFC3_08190 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 31 44 1.7E-21 T 11-10-2018 XFC3_08925 f1b15ac38333c5fd2e0171e07e57b291 239 Pfam PF07650 KH domain 38 111 4.8E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08925 f1b15ac38333c5fd2e0171e07e57b291 239 Gene3D G3DSA:3.30.300.20 17 107 2.3E-26 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta XFC3_08925 f1b15ac38333c5fd2e0171e07e57b291 239 SUPERFAMILY SSF54814 2 106 5.23E-34 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XFC3_08925 f1b15ac38333c5fd2e0171e07e57b291 239 SMART SM00322 60 125 4.6E-6 T 11-10-2018 IPR004087 K Homology domain GO:0003676 XFC3_08925 f1b15ac38333c5fd2e0171e07e57b291 239 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 8.0E-87 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 XFC3_08925 f1b15ac38333c5fd2e0171e07e57b291 239 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 36.137 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 XFC3_08925 f1b15ac38333c5fd2e0171e07e57b291 239 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 5.4E-36 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08925 f1b15ac38333c5fd2e0171e07e57b291 239 Gene3D G3DSA:3.30.1140.32 108 208 1.2E-39 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08925 f1b15ac38333c5fd2e0171e07e57b291 239 SUPERFAMILY SSF54821 108 206 6.02E-37 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_00235 8dea310cc01a0fac3fd54d145eae9f7f 260 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 250 3.4E-62 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XFC3_00235 8dea310cc01a0fac3fd54d145eae9f7f 260 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 256 77.857 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XFC3_00235 8dea310cc01a0fac3fd54d145eae9f7f 260 SUPERFAMILY SSF63892 4 251 1.31E-76 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XFC3_00235 8dea310cc01a0fac3fd54d145eae9f7f 260 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 249 4.7E-79 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XFC3_00235 8dea310cc01a0fac3fd54d145eae9f7f 260 Gene3D G3DSA:3.20.20.70 1 258 1.2E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_08965 fe086dde420220edd17f8e89b0ac6913 265 PRINTS PR00123 ATP synthase A subunit signature 245 260 1.1E-12 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08965 fe086dde420220edd17f8e89b0ac6913 265 PRINTS PR00123 ATP synthase A subunit signature 95 111 1.1E-12 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08965 fe086dde420220edd17f8e89b0ac6913 265 PRINTS PR00123 ATP synthase A subunit signature 192 214 1.1E-12 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08965 fe086dde420220edd17f8e89b0ac6913 265 Pfam PF00119 ATP synthase A chain 38 259 2.6E-54 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08965 fe086dde420220edd17f8e89b0ac6913 265 SUPERFAMILY SSF81336 88 259 3.79E-39 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08965 fe086dde420220edd17f8e89b0ac6913 265 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 26 259 6.8E-43 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08965 fe086dde420220edd17f8e89b0ac6913 265 ProSitePatterns PS00449 ATP synthase a subunit signature. 195 204 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08965 fe086dde420220edd17f8e89b0ac6913 265 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 265 14.966 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08965 fe086dde420220edd17f8e89b0ac6913 265 Gene3D G3DSA:1.20.120.220 86 265 3.5E-51 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_03230 26c93f3cac629419c00c49a0fe070ba5 374 SUPERFAMILY SSF48600 18 107 3.51E-20 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFC3_03230 26c93f3cac629419c00c49a0fe070ba5 374 SMART SM00830 23 104 2.0E-29 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFC3_03230 26c93f3cac629419c00c49a0fe070ba5 374 Pfam PF01842 ACT domain 292 357 1.4E-10 T 11-10-2018 IPR002912 ACT domain XFC3_03230 26c93f3cac629419c00c49a0fe070ba5 374 TIGRFAM TIGR01807 CM_P2: chorismate mutase 19 94 6.3E-24 T 11-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 XFC3_03230 26c93f3cac629419c00c49a0fe070ba5 374 Pfam PF01817 Chorismate mutase type II 23 102 4.9E-21 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFC3_03230 26c93f3cac629419c00c49a0fe070ba5 374 PIRSF PIRSF001500 12 374 5.1E-145 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 XFC3_03230 26c93f3cac629419c00c49a0fe070ba5 374 SUPERFAMILY SSF53850 105 288 7.49E-51 T 11-10-2018 XFC3_03230 26c93f3cac629419c00c49a0fe070ba5 374 Gene3D G3DSA:3.30.70.260 283 373 1.1E-29 T 11-10-2018 XFC3_03230 26c93f3cac629419c00c49a0fe070ba5 374 SUPERFAMILY SSF55021 276 370 3.05E-28 T 11-10-2018 XFC3_03230 26c93f3cac629419c00c49a0fe070ba5 374 Gene3D G3DSA:1.20.59.10 21 105 3.8E-27 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFC3_03230 26c93f3cac629419c00c49a0fe070ba5 374 Gene3D G3DSA:3.40.190.10 108 279 2.1E-52 T 11-10-2018 XFC3_03230 26c93f3cac629419c00c49a0fe070ba5 374 Gene3D G3DSA:3.40.190.10 186 271 2.1E-52 T 11-10-2018 XFC3_03230 26c93f3cac629419c00c49a0fe070ba5 374 Pfam PF00800 Prephenate dehydratase 106 282 9.5E-59 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 XFC3_03480 15de9bacc440fb45d21bea9581a1e11d 507 Gene3D G3DSA:1.10.8.870 393 464 9.9E-23 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFC3_03480 15de9bacc440fb45d21bea9581a1e11d 507 Gene3D G3DSA:3.30.9.10 84 325 6.7E-132 T 11-10-2018 XFC3_03480 15de9bacc440fb45d21bea9581a1e11d 507 Gene3D G3DSA:3.50.50.60 7 369 6.7E-132 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_03480 15de9bacc440fb45d21bea9581a1e11d 507 Pfam PF01266 FAD dependent oxidoreductase 7 329 3.5E-47 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 XFC3_03480 15de9bacc440fb45d21bea9581a1e11d 507 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 389 479 1.3E-12 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFC3_03480 15de9bacc440fb45d21bea9581a1e11d 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 318 324 7.1E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFC3_03480 15de9bacc440fb45d21bea9581a1e11d 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 29 7.1E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFC3_03480 15de9bacc440fb45d21bea9581a1e11d 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 6 18 7.1E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFC3_03480 15de9bacc440fb45d21bea9581a1e11d 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 47 7.1E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFC3_03480 15de9bacc440fb45d21bea9581a1e11d 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 80 92 7.1E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFC3_03480 15de9bacc440fb45d21bea9581a1e11d 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 350 362 7.1E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFC3_03480 15de9bacc440fb45d21bea9581a1e11d 507 SUPERFAMILY SSF51905 1 370 7.99E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_07915 81e2fd489677578c60d493053f34f1e8 89 SUPERFAMILY SSF55594 1 88 3.01E-28 T 11-10-2018 IPR035895 HPr-like superfamily XFC3_07915 81e2fd489677578c60d493053f34f1e8 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site XFC3_07915 81e2fd489677578c60d493053f34f1e8 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.7E-33 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like XFC3_07915 81e2fd489677578c60d493053f34f1e8 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site XFC3_07915 81e2fd489677578c60d493053f34f1e8 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 7.7E-28 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like XFC3_07915 81e2fd489677578c60d493053f34f1e8 89 Gene3D G3DSA:3.30.1340.10 1 88 8.6E-31 T 11-10-2018 IPR035895 HPr-like superfamily XFC3_07915 81e2fd489677578c60d493053f34f1e8 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.4E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like XFC3_07915 81e2fd489677578c60d493053f34f1e8 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.4E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like XFC3_07915 81e2fd489677578c60d493053f34f1e8 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.4E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like XFC3_04980 8818211f92ddef78e0fef9b407f8e4fd 301 Pfam PF00561 alpha/beta hydrolase fold 33 285 3.2E-24 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFC3_04980 8818211f92ddef78e0fef9b407f8e4fd 301 Gene3D G3DSA:3.40.50.1820 2 299 1.4E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_04980 8818211f92ddef78e0fef9b407f8e4fd 301 PRINTS PR00412 Epoxide hydrolase signature 38 56 7.6E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 XFC3_04980 8818211f92ddef78e0fef9b407f8e4fd 301 PRINTS PR00412 Epoxide hydrolase signature 274 296 7.6E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 XFC3_04980 8818211f92ddef78e0fef9b407f8e4fd 301 PRINTS PR00412 Epoxide hydrolase signature 112 125 7.6E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 XFC3_04980 8818211f92ddef78e0fef9b407f8e4fd 301 SUPERFAMILY SSF53474 5 299 1.41E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_10335 1e51371ced2faa70bc3762a181bbadab 83 Gene3D G3DSA:2.30.30.90 1 81 9.4E-23 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain XFC3_10335 1e51371ced2faa70bc3762a181bbadab 83 SMART SM00899 1 77 2.6E-17 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 XFC3_10335 1e51371ced2faa70bc3762a181bbadab 83 SUPERFAMILY SSF50037 11 77 7.1E-13 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal XFC3_10335 1e51371ced2faa70bc3762a181bbadab 83 Pfam PF04023 FeoA domain 1 75 1.9E-16 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 XFC3_01325 6c5e00e9ef223e59ca34659cdc0d2210 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 63 172 5.9E-23 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01325 6c5e00e9ef223e59ca34659cdc0d2210 184 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 41.238 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01325 6c5e00e9ef223e59ca34659cdc0d2210 184 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01325 6c5e00e9ef223e59ca34659cdc0d2210 184 Gene3D G3DSA:3.40.50.12280 22 183 2.5E-78 T 11-10-2018 XFC3_01325 6c5e00e9ef223e59ca34659cdc0d2210 184 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 38 177 3.2E-76 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01325 6c5e00e9ef223e59ca34659cdc0d2210 184 SUPERFAMILY SSF56770 35 179 3.66E-66 T 11-10-2018 XFC3_05250 162b7eeb2c34ce4c7650d04666d578c0 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 152 2.4E-47 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFC3_05250 162b7eeb2c34ce4c7650d04666d578c0 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 85 101 1.7E-37 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFC3_05250 162b7eeb2c34ce4c7650d04666d578c0 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 1.7E-37 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFC3_05250 162b7eeb2c34ce4c7650d04666d578c0 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 63 79 1.7E-37 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFC3_05250 162b7eeb2c34ce4c7650d04666d578c0 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.7E-37 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFC3_05250 162b7eeb2c34ce4c7650d04666d578c0 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 109 128 1.7E-37 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFC3_05250 162b7eeb2c34ce4c7650d04666d578c0 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 157 5.0E-51 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFC3_05250 162b7eeb2c34ce4c7650d04666d578c0 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 155 42.632 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFC3_05250 162b7eeb2c34ce4c7650d04666d578c0 173 Gene3D G3DSA:3.30.420.10 4 160 4.0E-42 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFC3_05250 162b7eeb2c34ce4c7650d04666d578c0 173 SUPERFAMILY SSF53098 3 156 4.86E-47 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFC3_05250 162b7eeb2c34ce4c7650d04666d578c0 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 115 149 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 XFC3_01075 11296da1ec4012d1d42568a776b40a92 304 SUPERFAMILY SSF103481 46 140 3.27E-7 T 11-10-2018 XFC3_01075 11296da1ec4012d1d42568a776b40a92 304 Pfam PF00892 EamA-like transporter family 148 290 1.5E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XFC3_01075 11296da1ec4012d1d42568a776b40a92 304 Pfam PF00892 EamA-like transporter family 16 139 2.6E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XFC3_01075 11296da1ec4012d1d42568a776b40a92 304 SUPERFAMILY SSF103481 195 290 8.24E-9 T 11-10-2018 XFC3_08850 407a1a6ca808ab1fa6c42775cbd6e279 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 34.828 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 XFC3_08850 407a1a6ca808ab1fa6c42775cbd6e279 208 Gene3D G3DSA:1.10.1050.10 6 208 8.3E-77 T 11-10-2018 XFC3_08850 407a1a6ca808ab1fa6c42775cbd6e279 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 7.2E-76 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 XFC3_08850 407a1a6ca808ab1fa6c42775cbd6e279 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 7.3E-31 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 XFC3_08850 407a1a6ca808ab1fa6c42775cbd6e279 208 SMART SM00363 97 155 1.5E-19 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08850 407a1a6ca808ab1fa6c42775cbd6e279 208 SMART SM01390 3 96 7.0E-46 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 XFC3_08850 407a1a6ca808ab1fa6c42775cbd6e279 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08850 407a1a6ca808ab1fa6c42775cbd6e279 208 SUPERFAMILY SSF55174 2 208 6.54E-66 T 11-10-2018 XFC3_08850 407a1a6ca808ab1fa6c42775cbd6e279 208 Gene3D G3DSA:3.10.290.10 96 193 8.3E-77 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XFC3_08850 407a1a6ca808ab1fa6c42775cbd6e279 208 Pfam PF01479 S4 domain 98 144 7.3E-21 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_10420 ba68e3ddcea54d1dad67a7857e368240 144 SUPERFAMILY SSF101738 5 120 4.58E-46 T 11-10-2018 IPR036760 SspB-like superfamily XFC3_10420 ba68e3ddcea54d1dad67a7857e368240 144 Pfam PF04386 Stringent starvation protein B 10 144 1.5E-32 T 11-10-2018 IPR007481 Stringent starvation protein B XFC3_10420 ba68e3ddcea54d1dad67a7857e368240 144 PIRSF PIRSF005276 4 144 3.8E-54 T 11-10-2018 IPR007481 Stringent starvation protein B XFC3_10420 ba68e3ddcea54d1dad67a7857e368240 144 Gene3D G3DSA:2.30.30.220 4 129 7.1E-44 T 11-10-2018 IPR036760 SspB-like superfamily XFC3_07890 9bfd6ea676d4157c2ab00334678d79c0 460 PIRSF PIRSF000774 1 460 1.4E-131 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFC3_07890 9bfd6ea676d4157c2ab00334678d79c0 460 Gene3D G3DSA:1.10.10.60 399 457 9.8E-22 T 11-10-2018 XFC3_07890 9bfd6ea676d4157c2ab00334678d79c0 460 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 456 2.6E-137 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFC3_07890 9bfd6ea676d4157c2ab00334678d79c0 460 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 438 445 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFC3_07890 9bfd6ea676d4157c2ab00334678d79c0 460 Gene3D G3DSA:1.10.10.1330 99 209 1.0E-17 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily XFC3_07890 9bfd6ea676d4157c2ab00334678d79c0 460 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 347 366 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFC3_07890 9bfd6ea676d4157c2ab00334678d79c0 460 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 2.2E-15 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFC3_07890 9bfd6ea676d4157c2ab00334678d79c0 460 PRINTS PR00045 Sigma-54 factor signature 375 386 1.9E-25 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFC3_07890 9bfd6ea676d4157c2ab00334678d79c0 460 PRINTS PR00045 Sigma-54 factor signature 433 451 1.9E-25 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFC3_07890 9bfd6ea676d4157c2ab00334678d79c0 460 PRINTS PR00045 Sigma-54 factor signature 359 371 1.9E-25 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFC3_07890 9bfd6ea676d4157c2ab00334678d79c0 460 PRINTS PR00045 Sigma-54 factor signature 168 185 1.9E-25 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFC3_07890 9bfd6ea676d4157c2ab00334678d79c0 460 Pfam PF04552 Sigma-54, DNA binding domain 300 458 6.3E-64 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding XFC3_07890 9bfd6ea676d4157c2ab00334678d79c0 460 Pfam PF04963 Sigma-54 factor, core binding domain 94 287 4.6E-46 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 XFC3_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 Pfam PF13245 AAA domain 157 313 4.6E-30 T 11-10-2018 XFC3_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 Gene3D G3DSA:3.40.50.300 111 353 9.1E-58 T 11-10-2018 XFC3_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 SUPERFAMILY SSF52540 5 323 2.39E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 Gene3D G3DSA:1.10.10.1020 1 110 1.4E-5 T 11-10-2018 XFC3_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 Gene3D G3DSA:3.40.50.300 380 480 2.8E-6 T 11-10-2018 XFC3_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 Gene3D G3DSA:3.40.50.300 487 599 1.3E-23 T 11-10-2018 XFC3_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 13 608 45.017 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 XFC3_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 SUPERFAMILY SSF52540 290 609 3.36E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 Pfam PF13538 UvrD-like helicase C-terminal domain 539 585 2.7E-14 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain XFC3_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 4 610 6.2E-200 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 XFC3_00645 e463638adb26f4014e3cc8e062ac0425 219 SUPERFAMILY SSF53271 2 202 1.85E-43 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like XFC3_00645 e463638adb26f4014e3cc8e062ac0425 219 Gene3D G3DSA:3.40.50.2020 1 219 1.0E-66 T 11-10-2018 XFC3_00645 e463638adb26f4014e3cc8e062ac0425 219 Pfam PF00156 Phosphoribosyl transferase domain 46 158 5.1E-15 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XFC3_00645 e463638adb26f4014e3cc8e062ac0425 219 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 219 29.4 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_00645 e463638adb26f4014e3cc8e062ac0425 219 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 189 1.8E-53 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_10205 4da2841fa9753dc07f39ac54ad7fb02e 302 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFC3_10205 4da2841fa9753dc07f39ac54ad7fb02e 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 XFC3_10205 4da2841fa9753dc07f39ac54ad7fb02e 302 Pfam PF00701 Dihydrodipicolinate synthetase family 3 277 1.9E-75 T 11-10-2018 IPR002220 DapA-like GO:0016829 XFC3_10205 4da2841fa9753dc07f39ac54ad7fb02e 302 SUPERFAMILY SSF51569 3 281 1.15E-81 T 11-10-2018 XFC3_10205 4da2841fa9753dc07f39ac54ad7fb02e 302 Gene3D G3DSA:3.20.20.70 2 289 4.8E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_10205 4da2841fa9753dc07f39ac54ad7fb02e 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 1.8E-25 T 11-10-2018 IPR002220 DapA-like GO:0016829 XFC3_10205 4da2841fa9753dc07f39ac54ad7fb02e 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 1.8E-25 T 11-10-2018 IPR002220 DapA-like GO:0016829 XFC3_10205 4da2841fa9753dc07f39ac54ad7fb02e 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.8E-25 T 11-10-2018 IPR002220 DapA-like GO:0016829 XFC3_10205 4da2841fa9753dc07f39ac54ad7fb02e 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.8E-25 T 11-10-2018 IPR002220 DapA-like GO:0016829 XFC3_10205 4da2841fa9753dc07f39ac54ad7fb02e 302 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 278 2.2E-77 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFC3_10205 4da2841fa9753dc07f39ac54ad7fb02e 302 PIRSF PIRSF001365 2 296 7.2E-77 T 11-10-2018 IPR002220 DapA-like GO:0016829 XFC3_10205 4da2841fa9753dc07f39ac54ad7fb02e 302 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 287 50.273 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFC3_10205 4da2841fa9753dc07f39ac54ad7fb02e 302 SMART SM01130 2 289 9.3E-105 T 11-10-2018 IPR002220 DapA-like GO:0016829 XFC3_01660 e7779b3f90ad33afb972c8b02c01f109 190 SUPERFAMILY SSF55811 6 151 6.63E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XFC3_01660 e7779b3f90ad33afb972c8b02c01f109 190 Pfam PF00293 NUDIX domain 7 130 4.8E-22 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XFC3_01660 e7779b3f90ad33afb972c8b02c01f109 190 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XFC3_01660 e7779b3f90ad33afb972c8b02c01f109 190 Gene3D G3DSA:3.90.79.10 1 159 6.3E-41 T 11-10-2018 XFC3_01660 e7779b3f90ad33afb972c8b02c01f109 190 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 35.321 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH XFC3_03315 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 301 320 5.5E-54 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFC3_03315 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 153 172 5.5E-54 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFC3_03315 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 271 286 5.5E-54 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFC3_03315 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 192 211 5.5E-54 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFC3_03315 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 5.5E-54 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFC3_03315 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 246 262 5.5E-54 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFC3_03315 1a466fea7b330498c0445896fc4cb9fb 334 SUPERFAMILY SSF51569 2 329 3.37E-138 T 11-10-2018 XFC3_03315 1a466fea7b330498c0445896fc4cb9fb 334 Gene3D G3DSA:3.20.20.70 1 331 3.2E-139 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_03315 1a466fea7b330498c0445896fc4cb9fb 334 PIRSF PIRSF001415 1 330 1.5E-150 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFC3_03315 1a466fea7b330498c0445896fc4cb9fb 334 SMART SM01004 3 327 1.5E-231 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFC3_03315 1a466fea7b330498c0445896fc4cb9fb 334 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 326 3.3E-134 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFC3_07685 988489dd573290e1bbbd310bacda78fb 171 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 131 1.9E-30 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFC3_07685 988489dd573290e1bbbd310bacda78fb 171 SUPERFAMILY SSF55083 1 151 4.05E-37 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFC3_07685 988489dd573290e1bbbd310bacda78fb 171 Gene3D G3DSA:3.30.70.560 1 155 4.8E-33 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFC3_07685 988489dd573290e1bbbd310bacda78fb 171 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 131 1.7E-21 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFC3_12195 d90031bac19fa99be7f4bed8f818d303 356 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 162 171 - T 11-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 XFC3_12195 d90031bac19fa99be7f4bed8f818d303 356 Gene3D G3DSA:3.20.20.80 37 353 8.3E-93 T 11-10-2018 XFC3_12195 d90031bac19fa99be7f4bed8f818d303 356 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 58 316 3.1E-48 T 11-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 XFC3_12195 d90031bac19fa99be7f4bed8f818d303 356 SUPERFAMILY SSF51445 37 341 1.04E-74 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFC3_05215 93d4a201a55836fc57b03e0464cf8b04 268 Gene3D G3DSA:3.20.20.140 1 265 1.9E-93 T 11-10-2018 XFC3_05215 93d4a201a55836fc57b03e0464cf8b04 268 PIRSF PIRSF005902 1 264 2.1E-71 T 11-10-2018 IPR001130 TatD family GO:0016788 XFC3_05215 93d4a201a55836fc57b03e0464cf8b04 268 SUPERFAMILY SSF51556 3 261 3.53E-80 T 11-10-2018 IPR032466 Metal-dependent hydrolase XFC3_05215 93d4a201a55836fc57b03e0464cf8b04 268 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XFC3_05215 93d4a201a55836fc57b03e0464cf8b04 268 Pfam PF01026 TatD related DNase 4 260 1.0E-67 T 11-10-2018 IPR001130 TatD family GO:0016788 XFC3_04600 1d84ee7a1b6305a89e4e7a8853b68bf2 178 SUPERFAMILY SSF51306 31 176 1.36E-17 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XFC3_04600 1d84ee7a1b6305a89e4e7a8853b68bf2 178 TIGRFAM TIGR02771 TraF_Ti: conjugative transfer signal peptidase TraF 11 178 4.6E-70 T 11-10-2018 IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF GO:0000746|GO:0042597 XFC3_04600 1d84ee7a1b6305a89e4e7a8853b68bf2 178 Pfam PF10502 Signal peptidase, peptidase S26 32 177 4.4E-42 T 11-10-2018 IPR019533 Peptidase S26 XFC3_04600 1d84ee7a1b6305a89e4e7a8853b68bf2 178 Gene3D G3DSA:2.10.109.10 80 177 3.0E-10 T 11-10-2018 XFC3_05230 290a003a2a2870f9ba75ddea88a01a7e 397 Pfam PF00448 SRP54-type protein, GTPase domain 189 390 1.3E-71 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFC3_05230 290a003a2a2870f9ba75ddea88a01a7e 397 SMART SM00962 189 391 2.1E-109 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFC3_05230 290a003a2a2870f9ba75ddea88a01a7e 397 SMART SM00963 95 174 2.0E-16 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFC3_05230 290a003a2a2870f9ba75ddea88a01a7e 397 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 118 390 8.4E-99 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 XFC3_05230 290a003a2a2870f9ba75ddea88a01a7e 397 Gene3D G3DSA:3.40.50.300 178 379 5.3E-102 T 11-10-2018 XFC3_05230 290a003a2a2870f9ba75ddea88a01a7e 397 SMART SM00382 188 367 1.3E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_05230 290a003a2a2870f9ba75ddea88a01a7e 397 SUPERFAMILY SSF52540 140 389 9.15E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_05230 290a003a2a2870f9ba75ddea88a01a7e 397 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 117 391 59.839 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 XFC3_05230 290a003a2a2870f9ba75ddea88a01a7e 397 Pfam PF02881 SRP54-type protein, helical bundle domain 105 170 2.6E-12 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFC3_05230 290a003a2a2870f9ba75ddea88a01a7e 397 Gene3D G3DSA:1.20.120.140 112 389 5.3E-102 T 11-10-2018 XFC3_05230 290a003a2a2870f9ba75ddea88a01a7e 397 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 364 377 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFC3_08910 f842ec5448b27dbd98f3f443b1af4c54 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 85 22.488 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08910 f842ec5448b27dbd98f3f443b1af4c54 88 Pfam PF00366 Ribosomal protein S17 15 82 2.0E-30 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08910 f842ec5448b27dbd98f3f443b1af4c54 88 Gene3D G3DSA:2.40.50.140 7 87 4.9E-33 T 11-10-2018 XFC3_08910 f842ec5448b27dbd98f3f443b1af4c54 88 SUPERFAMILY SSF50249 10 86 3.73E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_08910 f842ec5448b27dbd98f3f443b1af4c54 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 11 81 1.0E-35 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08910 f842ec5448b27dbd98f3f443b1af4c54 88 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 1.6E-10 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08910 f842ec5448b27dbd98f3f443b1af4c54 88 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 1.6E-10 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08910 f842ec5448b27dbd98f3f443b1af4c54 88 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 1.6E-10 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08910 f842ec5448b27dbd98f3f443b1af4c54 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 11 81 1.7E-32 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_02740 424d2a7f65cc75fbf6a70535315b22bf 295 Pfam PF00795 Carbon-nitrogen hydrolase 8 272 1.8E-54 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 XFC3_02740 424d2a7f65cc75fbf6a70535315b22bf 295 SUPERFAMILY SSF56317 6 292 3.66E-85 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XFC3_02740 424d2a7f65cc75fbf6a70535315b22bf 295 Gene3D G3DSA:3.60.110.10 3 293 2.1E-95 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XFC3_07125 f8a03031672c7aee727a6108c8254391 566 Pfam PF00437 Type II/IV secretion system protein 191 455 1.2E-84 T 11-10-2018 IPR001482 Type II/IV secretion system protein XFC3_07125 f8a03031672c7aee727a6108c8254391 566 Gene3D G3DSA:3.30.450.90 158 288 1.4E-49 T 11-10-2018 XFC3_07125 f8a03031672c7aee727a6108c8254391 566 Gene3D G3DSA:1.10.40.70 2 62 2.3E-26 T 11-10-2018 XFC3_07125 f8a03031672c7aee727a6108c8254391 566 SUPERFAMILY SSF160246 3 148 4.71E-30 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily XFC3_07125 f8a03031672c7aee727a6108c8254391 566 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 11-10-2018 IPR001482 Type II/IV secretion system protein XFC3_07125 f8a03031672c7aee727a6108c8254391 566 SUPERFAMILY SSF52540 173 563 2.24E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07125 f8a03031672c7aee727a6108c8254391 566 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 83 563 2.4E-216 T 11-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 XFC3_07125 f8a03031672c7aee727a6108c8254391 566 SMART SM00382 316 437 1.9E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_07125 f8a03031672c7aee727a6108c8254391 566 Gene3D G3DSA:3.30.300.160 63 148 7.1E-30 T 11-10-2018 XFC3_07125 f8a03031672c7aee727a6108c8254391 566 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 44 151 1.8E-14 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal XFC3_07125 f8a03031672c7aee727a6108c8254391 566 Gene3D G3DSA:3.40.50.300 291 565 1.3E-102 T 11-10-2018 XFC3_11340 bf2a61d8d55072931f3622b9ebe629c0 103 Pfam PF16083 LydA holin phage, holin superfamily III 9 83 7.9E-20 T 11-10-2018 IPR032126 LydA-like holin XFC3_07415 bf2a61d8d55072931f3622b9ebe629c0 103 Pfam PF16083 LydA holin phage, holin superfamily III 9 83 7.9E-20 T 11-10-2018 IPR032126 LydA-like holin XFC3_10035 bf2a61d8d55072931f3622b9ebe629c0 103 Pfam PF16083 LydA holin phage, holin superfamily III 9 83 7.9E-20 T 11-10-2018 IPR032126 LydA-like holin XFC3_03225 e070ea90620b441d179c2a768d564812 362 SUPERFAMILY SSF53383 3 360 2.81E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFC3_03225 e070ea90620b441d179c2a768d564812 362 Gene3D G3DSA:3.90.1150.10 258 362 8.8E-38 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFC3_03225 e070ea90620b441d179c2a768d564812 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 361 7.1E-156 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 XFC3_03225 e070ea90620b441d179c2a768d564812 362 Pfam PF00266 Aminotransferase class-V 5 350 1.1E-50 T 11-10-2018 IPR000192 Aminotransferase class V domain XFC3_03225 e070ea90620b441d179c2a768d564812 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 3 361 46.744 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 XFC3_03225 e070ea90620b441d179c2a768d564812 362 PIRSF PIRSF000525 1 362 1.2E-144 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 XFC3_03225 e070ea90620b441d179c2a768d564812 362 Gene3D G3DSA:3.40.640.10 18 256 1.1E-80 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFC3_08920 3bf35135801b59290d58ce6a98b7840d 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.7E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08920 3bf35135801b59290d58ce6a98b7840d 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.7E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08920 3bf35135801b59290d58ce6a98b7840d 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.7E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08920 3bf35135801b59290d58ce6a98b7840d 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.7E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08920 3bf35135801b59290d58ce6a98b7840d 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08920 3bf35135801b59290d58ce6a98b7840d 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 35.985 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08920 3bf35135801b59290d58ce6a98b7840d 137 Gene3D G3DSA:3.90.1170.10 1 137 3.4E-55 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 XFC3_08920 3bf35135801b59290d58ce6a98b7840d 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.8E-47 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 XFC3_08920 3bf35135801b59290d58ce6a98b7840d 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 6.3E-55 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08920 3bf35135801b59290d58ce6a98b7840d 137 SUPERFAMILY SSF54686 1 134 3.92E-53 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 XFC3_01360 405e40a207f12ae2f2d3e79e11474e64 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XFC3_01360 405e40a207f12ae2f2d3e79e11474e64 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XFC3_01360 405e40a207f12ae2f2d3e79e11474e64 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 137 1.2E-43 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01360 405e40a207f12ae2f2d3e79e11474e64 162 SUPERFAMILY SSF54862 36 144 7.95E-25 T 11-10-2018 XFC3_01360 405e40a207f12ae2f2d3e79e11474e64 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 4.5E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XFC3_01360 405e40a207f12ae2f2d3e79e11474e64 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 26.544 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01360 405e40a207f12ae2f2d3e79e11474e64 162 Gene3D G3DSA:3.30.70.3270 36 161 1.0E-34 T 11-10-2018 XFC3_00970 654d094274918b1b491585337cb6c1b4 272 Gene3D G3DSA:3.20.20.60 9 272 5.4E-100 T 11-10-2018 XFC3_00970 654d094274918b1b491585337cb6c1b4 272 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 16 270 8.4E-97 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XFC3_00970 654d094274918b1b491585337cb6c1b4 272 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 270 40.815 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XFC3_00970 654d094274918b1b491585337cb6c1b4 272 SUPERFAMILY SSF51621 10 270 3.57E-98 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XFC3_00970 654d094274918b1b491585337cb6c1b4 272 Pfam PF02548 Ketopantoate hydroxymethyltransferase 11 265 5.8E-102 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XFC3_00970 654d094274918b1b491585337cb6c1b4 272 PIRSF PIRSF000388 1 272 1.5E-94 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XFC3_09580 1107e5b56048c42352999dc343c24fd0 348 Pfam PF12146 Serine aminopeptidase, S33 84 212 5.2E-9 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 XFC3_09580 1107e5b56048c42352999dc343c24fd0 348 SUPERFAMILY SSF53474 80 330 1.91E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_09580 1107e5b56048c42352999dc343c24fd0 348 Gene3D G3DSA:3.40.50.1820 65 332 1.6E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_07575 7822053d0d683508a40f2523cab9bd5a 284 Gene3D G3DSA:3.10.310.10 124 271 3.3E-88 T 11-10-2018 XFC3_07575 7822053d0d683508a40f2523cab9bd5a 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 73 87 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XFC3_07575 7822053d0d683508a40f2523cab9bd5a 284 Pfam PF01678 Diaminopimelate epimerase 162 273 5.5E-23 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XFC3_07575 7822053d0d683508a40f2523cab9bd5a 284 Pfam PF01678 Diaminopimelate epimerase 12 131 2.3E-21 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XFC3_07575 7822053d0d683508a40f2523cab9bd5a 284 SUPERFAMILY SSF54506 149 282 1.73E-46 T 11-10-2018 XFC3_07575 7822053d0d683508a40f2523cab9bd5a 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 10 284 35.414 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XFC3_07575 7822053d0d683508a40f2523cab9bd5a 284 SUPERFAMILY SSF54506 10 139 1.57E-39 T 11-10-2018 XFC3_07575 7822053d0d683508a40f2523cab9bd5a 284 Gene3D G3DSA:3.10.310.10 12 280 3.3E-88 T 11-10-2018 XFC3_07575 7822053d0d683508a40f2523cab9bd5a 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 11 281 4.5E-74 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XFC3_06000 06be063121102c096bfc2f9dc7818237 727 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 555 702 6.3E-32 T 11-10-2018 IPR020992 Tail specific protease, C-terminal XFC3_06000 06be063121102c096bfc2f9dc7818237 727 Gene3D G3DSA:2.30.42.10 238 322 5.0E-12 T 11-10-2018 XFC3_06000 06be063121102c096bfc2f9dc7818237 727 SUPERFAMILY SSF52096 171 554 2.32E-67 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFC3_06000 06be063121102c096bfc2f9dc7818237 727 Pfam PF03572 Peptidase family S41 366 548 2.5E-53 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XFC3_06000 06be063121102c096bfc2f9dc7818237 727 Gene3D G3DSA:3.90.226.10 328 569 2.0E-59 T 11-10-2018 XFC3_06000 06be063121102c096bfc2f9dc7818237 727 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 242 320 1.2E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFC3_06000 06be063121102c096bfc2f9dc7818237 727 SUPERFAMILY SSF50156 247 319 2.51E-10 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFC3_06000 06be063121102c096bfc2f9dc7818237 727 SMART SM00245 330 550 4.8E-48 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XFC3_06000 06be063121102c096bfc2f9dc7818237 727 SMART SM00228 247 325 6.4E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFC3_06000 06be063121102c096bfc2f9dc7818237 727 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 204 569 6.0E-88 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 XFC3_02785 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 Gene3D G3DSA:3.40.50.720 282 617 9.2E-106 T 11-10-2018 XFC3_02785 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 Gene3D G3DSA:3.40.50.720 144 268 5.5E-30 T 11-10-2018 XFC3_02785 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 Pfam PF13727 CoA-binding domain 68 242 4.0E-12 T 11-10-2018 XFC3_02785 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 SUPERFAMILY SSF51735 285 553 2.13E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_02785 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 Pfam PF02719 Polysaccharide biosynthesis protein 287 570 3.5E-112 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain XFC3_02785 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 SUPERFAMILY SSF53335 129 322 2.99E-12 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_07150 d3d14ad0ecea70628cc62592b3cde94a 275 Pfam PF05175 Methyltransferase small domain 99 186 1.6E-18 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 XFC3_07150 d3d14ad0ecea70628cc62592b3cde94a 275 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 272 43.01 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 XFC3_07150 d3d14ad0ecea70628cc62592b3cde94a 275 SUPERFAMILY SSF53335 14 270 2.74E-55 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_07150 d3d14ad0ecea70628cc62592b3cde94a 275 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 19 268 1.9E-88 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 XFC3_07150 d3d14ad0ecea70628cc62592b3cde94a 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 177 183 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XFC3_07150 d3d14ad0ecea70628cc62592b3cde94a 275 Gene3D G3DSA:1.10.8.10 5 80 5.6E-19 T 11-10-2018 XFC3_07150 d3d14ad0ecea70628cc62592b3cde94a 275 Gene3D G3DSA:3.40.50.150 83 272 6.8E-60 T 11-10-2018 XFC3_07150 d3d14ad0ecea70628cc62592b3cde94a 275 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 10 271 7.1E-73 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 XFC3_08880 1f5e04831da1c10dd7bdd58d782eaac4 119 Gene3D G3DSA:3.30.420.100 3 119 1.2E-36 T 11-10-2018 XFC3_08880 1f5e04831da1c10dd7bdd58d782eaac4 119 SUPERFAMILY SSF53137 5 117 1.81E-44 T 11-10-2018 XFC3_08880 1f5e04831da1c10dd7bdd58d782eaac4 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 5 119 9.5E-35 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08880 1f5e04831da1c10dd7bdd58d782eaac4 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 4 119 24.957 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08880 1f5e04831da1c10dd7bdd58d782eaac4 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 119 2.6E-33 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_02585 27476b8bd3d997a003a7b1896f7a0c7e 252 SUPERFAMILY SSF75217 5 164 2.94E-36 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases XFC3_02585 27476b8bd3d997a003a7b1896f7a0c7e 252 Gene3D G3DSA:1.10.8.590 180 242 3.8E-19 T 11-10-2018 XFC3_02585 27476b8bd3d997a003a7b1896f7a0c7e 252 Pfam PF00588 SpoU rRNA Methylase family 7 157 1.3E-35 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 XFC3_02585 27476b8bd3d997a003a7b1896f7a0c7e 252 PIRSF PIRSF004808 3 249 1.6E-71 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 XFC3_02585 27476b8bd3d997a003a7b1896f7a0c7e 252 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 6 242 2.6E-65 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 XFC3_02585 27476b8bd3d997a003a7b1896f7a0c7e 252 Gene3D G3DSA:3.40.1280.10 3 168 2.6E-61 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XFC3_09005 04033bf4fd517362a70d6402d11813a4 191 PIRSF PIRSF026640 4 191 1.1E-69 T 11-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFC3_09005 04033bf4fd517362a70d6402d11813a4 191 SMART SM00830 30 109 2.1E-12 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFC3_09005 04033bf4fd517362a70d6402d11813a4 191 SUPERFAMILY SSF48600 37 190 1.5E-40 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFC3_09005 04033bf4fd517362a70d6402d11813a4 191 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 34 145 1.3E-33 T 11-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFC3_09005 04033bf4fd517362a70d6402d11813a4 191 Pfam PF01817 Chorismate mutase type II 39 107 3.2E-7 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFC3_09005 04033bf4fd517362a70d6402d11813a4 191 Gene3D G3DSA:1.20.1250.110 24 191 1.7E-52 T 11-10-2018 XFC3_10275 8e7ccc44bbb455677a67691bb9eedbe4 417 PIRSF PIRSF000412 3 416 3.2E-164 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XFC3_10275 8e7ccc44bbb455677a67691bb9eedbe4 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XFC3_10275 8e7ccc44bbb455677a67691bb9eedbe4 417 SUPERFAMILY SSF53383 7 416 2.61E-174 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFC3_10275 8e7ccc44bbb455677a67691bb9eedbe4 417 Gene3D G3DSA:3.90.1150.10 11 393 8.8E-183 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFC3_10275 8e7ccc44bbb455677a67691bb9eedbe4 417 Gene3D G3DSA:3.40.640.10 37 289 8.8E-183 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFC3_10275 8e7ccc44bbb455677a67691bb9eedbe4 417 Pfam PF00464 Serine hydroxymethyltransferase 9 386 1.4E-177 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XFC3_10275 8e7ccc44bbb455677a67691bb9eedbe4 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 51.664 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XFC3_02655 13af9c768a3508867cf6fcb27c7edcaa 153 Pfam PF03100 CcmE 4 127 6.4E-38 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 XFC3_02655 13af9c768a3508867cf6fcb27c7edcaa 153 Gene3D G3DSA:2.40.50.140 28 134 7.2E-33 T 11-10-2018 XFC3_02655 13af9c768a3508867cf6fcb27c7edcaa 153 SUPERFAMILY SSF82093 28 133 9.68E-34 T 11-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 XFC3_02655 13af9c768a3508867cf6fcb27c7edcaa 153 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 138 27.679 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 XFC3_09185 1682f560e8c0f5e9d4323bb540bcdd71 394 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 4 389 5.3E-135 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XFC3_09185 1682f560e8c0f5e9d4323bb540bcdd71 394 Gene3D G3DSA:3.20.140.10 1 394 8.3E-147 T 11-10-2018 XFC3_09185 1682f560e8c0f5e9d4323bb540bcdd71 394 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 165 391 1.7E-79 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 XFC3_09185 1682f560e8c0f5e9d4323bb540bcdd71 394 SUPERFAMILY SSF51690 120 390 9.42E-84 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XFC3_09185 1682f560e8c0f5e9d4323bb540bcdd71 394 PIRSF PIRSF000484 1 378 1.5E-65 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 XFC3_09185 1682f560e8c0f5e9d4323bb540bcdd71 394 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 392 50.133 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XFC3_09185 1682f560e8c0f5e9d4323bb540bcdd71 394 SUPERFAMILY SSF54675 2 137 1.27E-43 T 11-10-2018 XFC3_03160 58e56ee28c57499167c26984415059b8 172 Gene3D G3DSA:2.30.22.10 114 170 2.6E-22 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 XFC3_03160 58e56ee28c57499167c26984415059b8 172 SUPERFAMILY SSF51064 117 171 2.88E-18 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 XFC3_03160 58e56ee28c57499167c26984415059b8 172 ProSitePatterns PS01071 grpE protein signature. 125 168 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XFC3_03160 58e56ee28c57499167c26984415059b8 172 SUPERFAMILY SSF58014 20 114 1.96E-21 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 XFC3_03160 58e56ee28c57499167c26984415059b8 172 PRINTS PR00773 GrpE protein signature 122 137 2.9E-23 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XFC3_03160 58e56ee28c57499167c26984415059b8 172 PRINTS PR00773 GrpE protein signature 149 168 2.9E-23 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XFC3_03160 58e56ee28c57499167c26984415059b8 172 PRINTS PR00773 GrpE protein signature 42 58 2.9E-23 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XFC3_03160 58e56ee28c57499167c26984415059b8 172 PRINTS PR00773 GrpE protein signature 70 85 2.9E-23 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XFC3_03160 58e56ee28c57499167c26984415059b8 172 Hamap MF_01151 Protein GrpE [grpE]. 3 170 19.169 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XFC3_03160 58e56ee28c57499167c26984415059b8 172 Pfam PF01025 GrpE 11 170 1.4E-45 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XFC3_03160 58e56ee28c57499167c26984415059b8 172 Gene3D G3DSA:3.90.20.20 2 111 1.5E-22 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 XFC3_02550 a983b6d15d103c4564ef0ae3ced10609 367 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 42 358 3.0E-71 T 11-10-2018 IPR003770 Endolytic murein transglycosylase XFC3_02550 a983b6d15d103c4564ef0ae3ced10609 367 Gene3D G3DSA:3.30.160.60 324 362 3.8E-13 T 11-10-2018 XFC3_02550 a983b6d15d103c4564ef0ae3ced10609 367 Pfam PF02618 YceG-like family 62 350 1.4E-72 T 11-10-2018 IPR003770 Endolytic murein transglycosylase XFC3_02550 a983b6d15d103c4564ef0ae3ced10609 367 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 18 355 31.227 T 11-10-2018 IPR003770 Endolytic murein transglycosylase XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF50249 642 730 1.34E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:2.40.50.140 635 727 1.9E-27 T 11-10-2018 XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:1.10.150.310 503 634 4.5E-50 T 11-10-2018 XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 SMART SM00732 329 428 4.0E-37 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 Pfam PF09371 Tex-like protein N-terminal domain 14 196 1.0E-64 T 11-10-2018 IPR018974 Tex-like protein, N-terminal XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF158832 5 324 5.75E-112 T 11-10-2018 XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF47781 565 636 4.89E-20 T 11-10-2018 IPR010994 RuvA domain 2-like XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF53098 325 473 5.54E-51 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:3.30.420.140 328 455 2.2E-150 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 SMART SM00316 653 724 2.3E-24 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 Pfam PF12836 Helix-hairpin-helix motif 495 559 7.7E-27 T 11-10-2018 XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:1.10.3500.10 117 500 2.2E-150 T 11-10-2018 IPR023323 Tex-like domain superfamily XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:1.10.10.650 3 114 9.2E-38 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF47781 474 561 8.45E-26 T 11-10-2018 IPR010994 RuvA domain 2-like XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 Pfam PF16921 Tex protein YqgF-like domain 330 455 2.3E-54 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain XFC3_03985 cf642a99e7065fb2b29ca3094d1dc5a9 772 Pfam PF00575 S1 RNA binding domain 653 724 5.9E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFC3_08105 cf8be024be226ba05d6c1bfb2b9625dc 401 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 XFC3_08105 cf8be024be226ba05d6c1bfb2b9625dc 401 Pfam PF00155 Aminotransferase class I and II 45 385 1.3E-58 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XFC3_08105 cf8be024be226ba05d6c1bfb2b9625dc 401 SUPERFAMILY SSF53383 9 389 7.51E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFC3_08105 cf8be024be226ba05d6c1bfb2b9625dc 401 Gene3D G3DSA:3.90.1150.10 44 382 6.0E-122 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFC3_08105 cf8be024be226ba05d6c1bfb2b9625dc 401 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 385 2.0E-142 T 11-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 XFC3_08105 cf8be024be226ba05d6c1bfb2b9625dc 401 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 6 389 43.881 T 11-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 XFC3_08105 cf8be024be226ba05d6c1bfb2b9625dc 401 Gene3D G3DSA:3.40.640.10 60 291 6.0E-122 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFC3_02610 8c53edfbec652813f0b425300381aea4 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 63 188 1.7E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFC3_02610 8c53edfbec652813f0b425300381aea4 229 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 15 220 9.2E-94 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 XFC3_02610 8c53edfbec652813f0b425300381aea4 229 Gene3D G3DSA:3.40.50.1000 15 213 3.0E-52 T 11-10-2018 IPR023214 HAD superfamily XFC3_02610 8c53edfbec652813f0b425300381aea4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 154 8.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFC3_02610 8c53edfbec652813f0b425300381aea4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 107 120 8.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFC3_02610 8c53edfbec652813f0b425300381aea4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 12 23 8.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFC3_02610 8c53edfbec652813f0b425300381aea4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 156 176 8.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFC3_02610 8c53edfbec652813f0b425300381aea4 229 SUPERFAMILY SSF56784 13 220 2.36E-52 T 11-10-2018 IPR036412 HAD-like superfamily XFC3_02610 8c53edfbec652813f0b425300381aea4 229 Gene3D G3DSA:1.10.150.240 27 93 3.0E-52 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XFC3_02610 8c53edfbec652813f0b425300381aea4 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 192 4.9E-31 T 11-10-2018 XFC3_02610 8c53edfbec652813f0b425300381aea4 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 192 2.5E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFC3_02610 8c53edfbec652813f0b425300381aea4 229 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 12 221 30.984 T 11-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 XFC3_03460 eefe6a22330996ac42812070060fd4e3 288 PIRSF PIRSF016020 15 287 3.7E-36 T 11-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 XFC3_03460 eefe6a22330996ac42812070060fd4e3 288 SUPERFAMILY SSF74650 7 283 4.9E-61 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 XFC3_03460 eefe6a22330996ac42812070060fd4e3 288 Pfam PF01263 Aldose 1-epimerase 20 283 2.7E-44 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 XFC3_03460 eefe6a22330996ac42812070060fd4e3 288 Gene3D G3DSA:2.70.98.10 4 287 6.9E-67 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 XFC3_00415 fe4854fe80b0c79f75e2eed56ecf1eac 376 Gene3D G3DSA:3.40.50.2000 188 353 5.0E-24 T 11-10-2018 XFC3_00415 fe4854fe80b0c79f75e2eed56ecf1eac 376 Gene3D G3DSA:3.40.50.2000 13 187 7.9E-23 T 11-10-2018 XFC3_00415 fe4854fe80b0c79f75e2eed56ecf1eac 376 SUPERFAMILY SSF53756 11 375 5.1E-56 T 11-10-2018 XFC3_00415 fe4854fe80b0c79f75e2eed56ecf1eac 376 Pfam PF00534 Glycosyl transferases group 1 198 346 1.2E-16 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 XFC3_00415 fe4854fe80b0c79f75e2eed56ecf1eac 376 Pfam PF13439 Glycosyltransferase Family 4 21 175 1.4E-22 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XFC3_10680 30488d22357dd7410731ea557238985e 290 Pfam PF01551 Peptidase family M23 167 265 1.5E-24 T 11-10-2018 IPR016047 Peptidase M23 XFC3_10680 30488d22357dd7410731ea557238985e 290 SUPERFAMILY SSF51261 142 266 1.41E-28 T 11-10-2018 IPR011055 Duplicated hybrid motif XFC3_10680 30488d22357dd7410731ea557238985e 290 Gene3D G3DSA:2.70.70.10 140 275 5.6E-34 T 11-10-2018 IPR011055 Duplicated hybrid motif XFC3_04140 261c340e6785e40eee172e4ee1ac7dd0 259 Pfam PF10991 Protein of unknown function (DUF2815) 17 197 8.0E-20 T 11-10-2018 IPR022595 Protein of unknown function DUF2815 XFC3_04140 261c340e6785e40eee172e4ee1ac7dd0 259 Gene3D G3DSA:2.40.50.140 15 199 4.1E-27 T 11-10-2018 XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:1.10.8.60 353 439 2.0E-31 T 11-10-2018 XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:1.10.8.60 654 751 5.1E-26 T 11-10-2018 XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 SUPERFAMILY SSF81923 1 141 1.96E-54 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 732 2.8E-20 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 310 1.2E-10 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 SUPERFAMILY SSF52540 169 431 2.68E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:3.40.50.300 441 652 9.6E-75 T 11-10-2018 XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 SMART SM00382 207 352 8.9E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 SMART SM00382 488 655 8.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:3.40.50.300 157 351 2.8E-63 T 11-10-2018 XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 SMART SM01086 654 743 9.3E-29 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 SUPERFAMILY SSF52540 438 746 6.7E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 735 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 492 510 3.2E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 3.2E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 534 552 3.2E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 596 610 3.2E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 62 1.1E-10 T 11-10-2018 IPR004176 Clp, N-terminal XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 487 648 6.3E-45 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFC3_07740 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:1.10.1780.10 1 142 2.0E-36 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XFC3_04535 54d38bcbebd224d3eb09b89319a520bf 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 73 3.6E-29 T 11-10-2018 IPR022789 Antitoxin ParD XFC3_04535 54d38bcbebd224d3eb09b89319a520bf 80 SUPERFAMILY SSF47598 5 45 2.33E-8 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XFC3_04535 54d38bcbebd224d3eb09b89319a520bf 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 78 1.6E-41 T 11-10-2018 IPR022789 Antitoxin ParD XFC3_04535 54d38bcbebd224d3eb09b89319a520bf 80 Gene3D G3DSA:1.10.8.1250 10 80 7.8E-24 T 11-10-2018 IPR038296 Antitoxin ParD superfamily XFC3_08500 d1e246d700f32568cfa7b7892e19d27e 791 SUPERFAMILY SSF51621 461 788 1.02E-93 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XFC3_08500 d1e246d700f32568cfa7b7892e19d27e 791 Gene3D G3DSA:3.50.30.10 358 476 9.5E-40 T 11-10-2018 XFC3_08500 d1e246d700f32568cfa7b7892e19d27e 791 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 788 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 XFC3_08500 d1e246d700f32568cfa7b7892e19d27e 791 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 XFC3_08500 d1e246d700f32568cfa7b7892e19d27e 791 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 787 4.2E-59 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 XFC3_08500 d1e246d700f32568cfa7b7892e19d27e 791 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 4.5E-25 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 XFC3_08500 d1e246d700f32568cfa7b7892e19d27e 791 PIRSF PIRSF000854 1 791 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 XFC3_08500 d1e246d700f32568cfa7b7892e19d27e 791 Gene3D G3DSA:3.30.1490.20 2 194 8.4E-70 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XFC3_08500 d1e246d700f32568cfa7b7892e19d27e 791 Gene3D G3DSA:3.30.470.20 195 356 1.7E-55 T 11-10-2018 XFC3_08500 d1e246d700f32568cfa7b7892e19d27e 791 SUPERFAMILY SSF56059 3 384 4.24E-104 T 11-10-2018 XFC3_08500 d1e246d700f32568cfa7b7892e19d27e 791 SUPERFAMILY SSF52009 347 465 1.57E-34 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 XFC3_08500 d1e246d700f32568cfa7b7892e19d27e 791 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 344 1.6E-113 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 XFC3_08500 d1e246d700f32568cfa7b7892e19d27e 791 Gene3D G3DSA:3.20.20.60 477 789 6.8E-98 T 11-10-2018 XFC3_08500 d1e246d700f32568cfa7b7892e19d27e 791 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 XFC3_10425 0ac8c513b07c38128103ea9cc6edd991 211 Gene3D G3DSA:3.40.30.10 11 200 1.7E-67 T 11-10-2018 XFC3_10425 0ac8c513b07c38128103ea9cc6edd991 211 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 4.9E-12 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 XFC3_10425 0ac8c513b07c38128103ea9cc6edd991 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 193 1.7E-7 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal XFC3_10425 0ac8c513b07c38128103ea9cc6edd991 211 Gene3D G3DSA:1.20.1050.10 89 192 1.7E-67 T 11-10-2018 XFC3_10425 0ac8c513b07c38128103ea9cc6edd991 211 SUPERFAMILY SSF52833 10 111 1.1E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_10425 0ac8c513b07c38128103ea9cc6edd991 211 SUPERFAMILY SSF47616 82 206 9.81E-24 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XFC3_00790 b7d40a9d41c88b786a0269300a319066 318 Pfam PF16200 C-terminal region of band_7 241 297 2.7E-9 T 11-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 XFC3_00790 b7d40a9d41c88b786a0269300a319066 318 SMART SM00244 21 179 8.6E-46 T 11-10-2018 IPR001107 Band 7 domain XFC3_00790 b7d40a9d41c88b786a0269300a319066 318 Gene3D G3DSA:3.30.479.30 50 181 2.7E-39 T 11-10-2018 XFC3_00790 b7d40a9d41c88b786a0269300a319066 318 SUPERFAMILY SSF117892 52 186 1.83E-35 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily XFC3_00790 b7d40a9d41c88b786a0269300a319066 318 Pfam PF01145 SPFH domain / Band 7 family 25 194 5.4E-31 T 11-10-2018 IPR001107 Band 7 domain XFC3_00790 b7d40a9d41c88b786a0269300a319066 318 PRINTS PR00721 Stomatin signature 155 173 1.3E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFC3_00790 b7d40a9d41c88b786a0269300a319066 318 PRINTS PR00721 Stomatin signature 174 195 1.3E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFC3_00790 b7d40a9d41c88b786a0269300a319066 318 PRINTS PR00721 Stomatin signature 111 128 1.3E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFC3_00790 b7d40a9d41c88b786a0269300a319066 318 PRINTS PR00721 Stomatin signature 131 154 1.3E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFC3_00790 b7d40a9d41c88b786a0269300a319066 318 PRINTS PR00721 Stomatin signature 76 97 1.3E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 256 282 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 8 288 50.888 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 SUPERFAMILY SSF88946 22 129 2.22E-38 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 84 97 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 Pfam PF04545 Sigma-70, region 4 233 283 2.1E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 21 286 1.9E-120 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 Gene3D G3DSA:1.10.10.10 212 286 2.1E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 55 283 6.1E-31 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 SUPERFAMILY SSF88659 214 286 7.29E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 Gene3D G3DSA:1.10.601.10 16 132 1.2E-29 T 11-10-2018 XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 Pfam PF04542 Sigma-70 region 2 60 129 6.4E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 PIRSF PIRSF000770 20 288 1.3E-33 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 PRINTS PR00046 Major sigma-70 factor signature 256 271 1.6E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 PRINTS PR00046 Major sigma-70 factor signature 84 97 1.6E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 PRINTS PR00046 Major sigma-70 factor signature 271 282 1.6E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFC3_12130 194f23966cd7fec9e9a61f6e797070f0 288 PRINTS PR00046 Major sigma-70 factor signature 236 248 1.6E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFC3_00495 c959c89c83e3eff29be2707629b22df8 211 Pfam PF00717 Peptidase S24-like 126 191 1.4E-14 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XFC3_00495 c959c89c83e3eff29be2707629b22df8 211 Gene3D G3DSA:1.10.10.10 1 68 1.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_00495 c959c89c83e3eff29be2707629b22df8 211 Pfam PF01726 LexA DNA binding domain 2 64 1.4E-16 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 XFC3_00495 c959c89c83e3eff29be2707629b22df8 211 TIGRFAM TIGR00498 lexA: repressor LexA 2 209 8.3E-54 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 XFC3_00495 c959c89c83e3eff29be2707629b22df8 211 SUPERFAMILY SSF51306 86 208 8.37E-33 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XFC3_00495 c959c89c83e3eff29be2707629b22df8 211 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 162 174 3.7E-10 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 XFC3_00495 c959c89c83e3eff29be2707629b22df8 211 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 123 133 3.7E-10 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 XFC3_00495 c959c89c83e3eff29be2707629b22df8 211 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 134 145 3.7E-10 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 XFC3_00495 c959c89c83e3eff29be2707629b22df8 211 SUPERFAMILY SSF46785 1 69 1.82E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_00495 c959c89c83e3eff29be2707629b22df8 211 Hamap MF_00015 LexA repressor [lexA]. 2 210 30.083 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 XFC3_00495 c959c89c83e3eff29be2707629b22df8 211 Gene3D G3DSA:2.10.109.10 92 210 4.3E-35 T 11-10-2018 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 153 225 3.6E-15 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 448 463 2.7E-26 T 11-10-2018 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 465 480 2.7E-26 T 11-10-2018 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 501 513 2.7E-26 T 11-10-2018 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.7E-26 T 11-10-2018 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 PIRSF PIRSF000732 1 575 8.1E-196 T 11-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 Gene3D G3DSA:3.20.20.60 234 573 2.5E-108 T 11-10-2018 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 563 1.9E-141 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 541 5.9E-96 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 Gene3D G3DSA:1.10.274.10 24 147 5.6E-55 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 SUPERFAMILY SSF47831 28 142 2.09E-25 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 127 1.6E-21 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 SUPERFAMILY SSF52009 114 233 7.59E-25 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 SUPERFAMILY SSF51621 249 548 2.62E-92 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 448 466 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 XFC3_07920 59cfb0e0e24dbea31b74d12d2e5761f0 575 Gene3D G3DSA:3.50.30.10 7 233 5.6E-55 T 11-10-2018 XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 PRINTS PR00315 GTP-binding elongation factor signature 63 71 2.2E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 PRINTS PR00315 GTP-binding elongation factor signature 83 93 2.2E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 PRINTS PR00315 GTP-binding elongation factor signature 13 26 2.2E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 PRINTS PR00315 GTP-binding elongation factor signature 135 144 2.2E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 PRINTS PR00315 GTP-binding elongation factor signature 99 110 2.2E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 512 8.6E-46 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 Pfam PF00009 Elongation factor Tu GTP binding domain 11 276 4.1E-48 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 525 51.892 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 Gene3D G3DSA:3.40.50.300 70 377 4.9E-108 T 11-10-2018 XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 SUPERFAMILY SSF52540 8 276 1.37E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 SUPERFAMILY SSF50447 259 391 2.83E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 151 1.2E-20 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 Gene3D G3DSA:3.30.70.3280 388 527 6.8E-50 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 Gene3D G3DSA:3.40.50.300 108 273 4.9E-108 T 11-10-2018 XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 SUPERFAMILY SSF54980 391 466 3.96E-16 T 11-10-2018 IPR035647 EF-G domain III/V-like XFC3_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 1 527 1.2E-246 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1403 1421 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1347 1361 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1427 1440 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Pfam PF01627 Hpt domain 535 623 2.4E-14 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Pfam PF01627 Hpt domain 693 782 1.8E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Pfam PF01627 Hpt domain 12 111 6.8E-7 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Pfam PF01627 Hpt domain 935 1035 4.9E-14 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Gene3D G3DSA:2.30.30.40 1443 1567 5.8E-29 T 11-10-2018 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 SUPERFAMILY SSF55874 1259 1440 7.73E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Gene3D G3DSA:1.20.120.160 934 1060 1.1E-23 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 SMART SM00387 1302 1443 5.2E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Pfam PF00072 Response regulator receiver domain 1597 1708 1.0E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 SUPERFAMILY SSF47226 290 408 4.41E-7 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 SMART SM00448 1595 1708 9.1E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 SUPERFAMILY SSF50341 1442 1571 6.15E-24 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 SMART SM00073 933 1030 2.7E-13 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 SMART SM00073 532 630 3.0E-4 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Pfam PF01584 CheW-like domain 1447 1574 4.3E-19 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 SUPERFAMILY SSF47226 690 805 2.36E-13 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Gene3D G3DSA:1.20.120.160 529 659 4.3E-19 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 SUPERFAMILY SSF47226 12 133 2.49E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Gene3D G3DSA:3.40.50.12740 1596 1719 8.1E-36 T 11-10-2018 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 SMART SM00260 1435 1572 2.7E-21 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 SUPERFAMILY SSF47226 935 1054 1.7E-24 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Gene3D G3DSA:2.40.50.180 1466 1527 5.8E-29 T 11-10-2018 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 SUPERFAMILY SSF52172 1594 1716 2.42E-34 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Gene3D G3DSA:1.20.120.160 690 831 6.2E-7 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1121 1256 6.5E-6 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Gene3D G3DSA:3.30.565.10 1256 1442 1.1E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 SUPERFAMILY SSF47226 531 635 6.67E-22 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1306 1442 4.0E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_05035 4a12a88ffb5737f998d6010acba0bcda 1719 SMART SM01231 1119 1257 1.5E-10 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 XFC3_03125 d6f64eb5a6c3b9dc20aed8e5f479a922 167 ProSitePatterns PS01317 SsrA-binding protein. 37 49 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site XFC3_03125 d6f64eb5a6c3b9dc20aed8e5f479a922 167 Gene3D G3DSA:2.40.280.10 11 140 7.0E-44 T 11-10-2018 IPR023620 Small protein B XFC3_03125 d6f64eb5a6c3b9dc20aed8e5f479a922 167 TIGRFAM TIGR00086 smpB: SsrA-binding protein 19 160 8.7E-51 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 XFC3_03125 d6f64eb5a6c3b9dc20aed8e5f479a922 167 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 19 143 3.0E-68 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 XFC3_03125 d6f64eb5a6c3b9dc20aed8e5f479a922 167 SUPERFAMILY SSF74982 13 143 1.44E-48 T 11-10-2018 IPR023620 Small protein B XFC3_03125 d6f64eb5a6c3b9dc20aed8e5f479a922 167 Pfam PF01668 SmpB protein 19 161 6.7E-56 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 XFC3_03125 d6f64eb5a6c3b9dc20aed8e5f479a922 167 Hamap MF_00023 SsrA-binding protein [smpB]. 1 166 68.864 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 XFC3_11600 70db5176ada1e351a45db8ac6f09bd07 316 SUPERFAMILY SSF55681 4 311 3.11E-68 T 11-10-2018 XFC3_11600 70db5176ada1e351a45db8ac6f09bd07 316 Gene3D G3DSA:3.30.930.10 1 315 2.8E-92 T 11-10-2018 XFC3_11600 70db5176ada1e351a45db8ac6f09bd07 316 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 7 311 2.8E-112 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 XFC3_11600 70db5176ada1e351a45db8ac6f09bd07 316 Pfam PF00152 tRNA synthetases class II (D, K and N) 5 312 5.2E-34 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_11600 70db5176ada1e351a45db8ac6f09bd07 316 PRINTS PR00982 Lysyl-tRNA synthetase signature 90 107 9.0E-7 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFC3_11600 70db5176ada1e351a45db8ac6f09bd07 316 PRINTS PR00982 Lysyl-tRNA synthetase signature 200 216 9.0E-7 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFC3_11600 70db5176ada1e351a45db8ac6f09bd07 316 PRINTS PR00982 Lysyl-tRNA synthetase signature 22 32 9.0E-7 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFC3_03465 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_03465 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_03465 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_03465 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 104 120 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_03465 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_03465 44732b4b0cd1a8c83a8847619fe13b47 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 153 250 3.6E-15 T 11-10-2018 XFC3_03465 44732b4b0cd1a8c83a8847619fe13b47 255 Pfam PF00106 short chain dehydrogenase 6 121 2.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_03465 44732b4b0cd1a8c83a8847619fe13b47 255 Gene3D G3DSA:3.40.50.720 1 252 3.5E-45 T 11-10-2018 XFC3_03465 44732b4b0cd1a8c83a8847619fe13b47 255 SUPERFAMILY SSF51735 5 253 8.61E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_07690 4055635de17c95347e628efd71776fa4 498 SUPERFAMILY SSF52172 379 497 4.27E-14 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_07690 4055635de17c95347e628efd71776fa4 498 Gene3D G3DSA:3.30.565.10 216 369 2.6E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_07690 4055635de17c95347e628efd71776fa4 498 Gene3D G3DSA:3.40.50.2300 10 138 8.4E-18 T 11-10-2018 XFC3_07690 4055635de17c95347e628efd71776fa4 498 Gene3D G3DSA:3.40.50.2300 379 498 7.1E-11 T 11-10-2018 XFC3_07690 4055635de17c95347e628efd71776fa4 498 Pfam PF00072 Response regulator receiver domain 383 492 1.2E-6 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_07690 4055635de17c95347e628efd71776fa4 498 Pfam PF00072 Response regulator receiver domain 14 116 5.7E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_07690 4055635de17c95347e628efd71776fa4 498 SMART SM00387 256 363 1.4E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_07690 4055635de17c95347e628efd71776fa4 498 SUPERFAMILY SSF52172 11 143 4.13E-21 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_07690 4055635de17c95347e628efd71776fa4 498 SUPERFAMILY SSF55874 207 361 1.57E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_07690 4055635de17c95347e628efd71776fa4 498 SUPERFAMILY SSF47384 145 213 7.85E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFC3_07690 4055635de17c95347e628efd71776fa4 498 SMART SM00388 150 215 0.0057 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFC3_07690 4055635de17c95347e628efd71776fa4 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 259 361 2.4E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_07690 4055635de17c95347e628efd71776fa4 498 SMART SM00448 11 122 1.6E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_07690 4055635de17c95347e628efd71776fa4 498 SMART SM00448 381 493 0.0057 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_07690 4055635de17c95347e628efd71776fa4 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 341 3.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_07690 4055635de17c95347e628efd71776fa4 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 308 3.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_07690 4055635de17c95347e628efd71776fa4 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 360 3.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_07690 4055635de17c95347e628efd71776fa4 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 322 3.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_07690 4055635de17c95347e628efd71776fa4 498 Gene3D G3DSA:1.10.287.130 139 212 4.5E-9 T 11-10-2018 XFC3_09460 7ab4bdcbcd43292d0513e05deae5493a 298 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 17 288 5.1E-89 T 11-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 XFC3_09460 7ab4bdcbcd43292d0513e05deae5493a 298 Pfam PF13622 Thioesterase-like superfamily 32 287 7.3E-59 T 11-10-2018 XFC3_09460 7ab4bdcbcd43292d0513e05deae5493a 298 Gene3D G3DSA:3.10.129.90 7 291 2.3E-96 T 11-10-2018 XFC3_09460 7ab4bdcbcd43292d0513e05deae5493a 298 SUPERFAMILY SSF54637 14 119 2.75E-37 T 11-10-2018 IPR029069 HotDog domain superfamily XFC3_09460 7ab4bdcbcd43292d0513e05deae5493a 298 SUPERFAMILY SSF54637 121 288 8.95E-49 T 11-10-2018 IPR029069 HotDog domain superfamily XFC3_08785 44530429dec77dac2ddf6cf3e56012a2 426 Pfam PF06689 ClpX C4-type zinc finger 16 53 3.4E-20 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 XFC3_08785 44530429dec77dac2ddf6cf3e56012a2 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 7 417 53.164 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 XFC3_08785 44530429dec77dac2ddf6cf3e56012a2 426 SMART SM00382 113 265 1.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_08785 44530429dec77dac2ddf6cf3e56012a2 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 1.3E-15 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFC3_08785 44530429dec77dac2ddf6cf3e56012a2 426 Gene3D G3DSA:3.30.50.30 6 55 1.6E-24 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily XFC3_08785 44530429dec77dac2ddf6cf3e56012a2 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 14 414 7.6E-204 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 XFC3_08785 44530429dec77dac2ddf6cf3e56012a2 426 Gene3D G3DSA:3.40.50.300 59 317 8.3E-109 T 11-10-2018 XFC3_08785 44530429dec77dac2ddf6cf3e56012a2 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 3.3E-49 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFC3_08785 44530429dec77dac2ddf6cf3e56012a2 426 SMART SM01086 319 414 8.0E-31 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFC3_08785 44530429dec77dac2ddf6cf3e56012a2 426 SUPERFAMILY SSF52540 64 406 2.2E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08785 44530429dec77dac2ddf6cf3e56012a2 426 Gene3D G3DSA:1.10.8.60 318 426 4.2E-40 T 11-10-2018 XFC3_08785 44530429dec77dac2ddf6cf3e56012a2 426 SUPERFAMILY SSF57716 16 51 1.28E-11 T 11-10-2018 XFC3_08785 44530429dec77dac2ddf6cf3e56012a2 426 SMART SM00994 15 54 9.8E-24 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 XFC3_08135 d338088f5b174057ffba742c66a1bf84 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 285 5.3E-35 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XFC3_08135 d338088f5b174057ffba742c66a1bf84 316 PIRSF PIRSF026649 1 296 1.1E-67 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XFC3_08535 66be2dbd128f53ab902a18c24c3d2277 1641 Pfam PF01835 MG2 domain 386 473 6.4E-20 T 11-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 XFC3_08535 66be2dbd128f53ab902a18c24c3d2277 1641 SUPERFAMILY SSF48239 1156 1413 1.1E-25 T 11-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid XFC3_08535 66be2dbd128f53ab902a18c24c3d2277 1641 SMART SM01359 747 890 2.4E-33 T 11-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 XFC3_08535 66be2dbd128f53ab902a18c24c3d2277 1641 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 748 890 3.1E-14 T 11-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 XFC3_08535 66be2dbd128f53ab902a18c24c3d2277 1641 Pfam PF00207 Alpha-2-macroglobulin family 957 1042 2.0E-8 T 11-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 XFC3_08535 66be2dbd128f53ab902a18c24c3d2277 1641 Gene3D G3DSA:1.50.10.20 1151 1417 1.8E-14 T 11-10-2018 XFC3_08535 66be2dbd128f53ab902a18c24c3d2277 1641 SMART SM01360 954 1043 6.9E-23 T 11-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 XFC3_08535 66be2dbd128f53ab902a18c24c3d2277 1641 Gene3D G3DSA:2.60.40.1930 386 485 7.9E-7 T 11-10-2018 XFC3_08535 66be2dbd128f53ab902a18c24c3d2277 1641 PIRSF PIRSF038980 33 1640 0.0 T 11-10-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria XFC3_08535 66be2dbd128f53ab902a18c24c3d2277 1641 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 286 380 1.5E-21 T 11-10-2018 XFC3_01480 be1012041d9788a78325edee00375c99 375 Gene3D G3DSA:3.30.1330.60 261 375 1.2E-39 T 11-10-2018 IPR036737 OmpA-like domain superfamily XFC3_01480 be1012041d9788a78325edee00375c99 375 SUPERFAMILY SSF103647 227 266 8.63E-6 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 XFC3_01480 be1012041d9788a78325edee00375c99 375 Pfam PF13505 Outer membrane protein beta-barrel domain 8 178 1.1E-16 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel XFC3_01480 be1012041d9788a78325edee00375c99 375 Gene3D G3DSA:2.40.160.20 19 201 3.0E-23 T 11-10-2018 XFC3_01480 be1012041d9788a78325edee00375c99 375 PRINTS PR01021 OMPA domain signature 272 294 6.3E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFC3_01480 be1012041d9788a78325edee00375c99 375 PRINTS PR01021 OMPA domain signature 302 317 6.3E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFC3_01480 be1012041d9788a78325edee00375c99 375 PRINTS PR01021 OMPA domain signature 317 333 6.3E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFC3_01480 be1012041d9788a78325edee00375c99 375 Pfam PF00691 OmpA family 271 367 4.6E-23 T 11-10-2018 IPR006665 OmpA-like domain XFC3_01480 be1012041d9788a78325edee00375c99 375 SUPERFAMILY SSF103088 266 372 1.06E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily XFC3_01480 be1012041d9788a78325edee00375c99 375 SUPERFAMILY SSF56925 27 171 3.14E-18 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XFC3_00910 7689c6430ad776b60a9871babe15415d 168 SUPERFAMILY SSF46785 26 162 6.73E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_00910 7689c6430ad776b60a9871babe15415d 168 Gene3D G3DSA:1.10.10.10 15 162 1.2E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_00910 7689c6430ad776b60a9871babe15415d 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 9.5E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_00910 7689c6430ad776b60a9871babe15415d 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 9.5E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_00910 7689c6430ad776b60a9871babe15415d 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 9.5E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_00910 7689c6430ad776b60a9871babe15415d 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 9.5E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_00910 7689c6430ad776b60a9871babe15415d 168 SMART SM00347 45 147 1.3E-19 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_00910 7689c6430ad776b60a9871babe15415d 168 Pfam PF01047 MarR family 52 112 2.3E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_00145 ccf09f6b138067e563163a9037c68431 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 XFC3_00145 ccf09f6b138067e563163a9037c68431 400 SUPERFAMILY SSF53383 3 397 1.05E-109 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFC3_00145 ccf09f6b138067e563163a9037c68431 400 PRINTS PR00799 Aspartate aminotransferase signature 208 220 1.2E-33 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XFC3_00145 ccf09f6b138067e563163a9037c68431 400 PRINTS PR00799 Aspartate aminotransferase signature 276 301 1.2E-33 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XFC3_00145 ccf09f6b138067e563163a9037c68431 400 PRINTS PR00799 Aspartate aminotransferase signature 343 361 1.2E-33 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XFC3_00145 ccf09f6b138067e563163a9037c68431 400 PRINTS PR00799 Aspartate aminotransferase signature 177 196 1.2E-33 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XFC3_00145 ccf09f6b138067e563163a9037c68431 400 Pfam PF00155 Aminotransferase class I and II 28 394 1.5E-75 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XFC3_00145 ccf09f6b138067e563163a9037c68431 400 Gene3D G3DSA:3.90.1150.10 7 394 5.9E-150 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFC3_00145 ccf09f6b138067e563163a9037c68431 400 Gene3D G3DSA:3.40.640.10 62 303 5.9E-150 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFC3_11965 935b7ce79c60d986c1680a35687e4f51 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 3.2E-152 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 XFC3_11965 935b7ce79c60d986c1680a35687e4f51 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 6.7E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_11965 935b7ce79c60d986c1680a35687e4f51 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.1E-37 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 XFC3_11965 935b7ce79c60d986c1680a35687e4f51 363 PIRSF PIRSF006641 1 363 3.2E-150 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 XFC3_11965 935b7ce79c60d986c1680a35687e4f51 363 Gene3D G3DSA:3.10.20.30 48 360 2.2E-146 T 11-10-2018 IPR012675 Beta-grasp domain superfamily XFC3_11965 935b7ce79c60d986c1680a35687e4f51 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_11965 935b7ce79c60d986c1680a35687e4f51 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_11965 935b7ce79c60d986c1680a35687e4f51 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_11965 935b7ce79c60d986c1680a35687e4f51 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_11965 935b7ce79c60d986c1680a35687e4f51 363 SUPERFAMILY SSF52540 3 301 5.64E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11965 935b7ce79c60d986c1680a35687e4f51 363 Gene3D G3DSA:1.10.150.300 113 200 2.2E-146 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 XFC3_11965 935b7ce79c60d986c1680a35687e4f51 363 SUPERFAMILY SSF81271 279 360 7.19E-35 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XFC3_11965 935b7ce79c60d986c1680a35687e4f51 363 Gene3D G3DSA:3.40.50.300 4 278 2.2E-146 T 11-10-2018 XFC3_11965 935b7ce79c60d986c1680a35687e4f51 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 43.486 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 XFC3_09295 dab594aa3d6855598f4d380389b14c08 364 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_09295 dab594aa3d6855598f4d380389b14c08 364 SUPERFAMILY SSF50331 238 361 8.02E-27 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal XFC3_09295 dab594aa3d6855598f4d380389b14c08 364 Gene3D G3DSA:3.40.50.300 3 222 2.8E-61 T 11-10-2018 XFC3_09295 dab594aa3d6855598f4d380389b14c08 364 Gene3D G3DSA:2.40.50.140 289 345 5.6E-30 T 11-10-2018 XFC3_09295 dab594aa3d6855598f4d380389b14c08 364 Gene3D G3DSA:2.40.50.940 223 354 5.6E-30 T 11-10-2018 XFC3_09295 dab594aa3d6855598f4d380389b14c08 364 SUPERFAMILY SSF52540 4 242 5.46E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_09295 dab594aa3d6855598f4d380389b14c08 364 SMART SM00382 29 211 1.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_09295 dab594aa3d6855598f4d380389b14c08 364 Pfam PF00005 ABC transporter 22 162 1.3E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_09295 dab594aa3d6855598f4d380389b14c08 364 Pfam PF08402 TOBE domain 282 353 8.9E-10 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 XFC3_10260 ab327cbf9d3e23974c12963d6de2453a 364 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 XFC3_10260 ab327cbf9d3e23974c12963d6de2453a 364 SUPERFAMILY SSF53597 150 360 1.7E-55 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XFC3_10260 ab327cbf9d3e23974c12963d6de2453a 364 Pfam PF01872 RibD C-terminal domain 152 356 1.0E-45 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 XFC3_10260 ab327cbf9d3e23974c12963d6de2453a 364 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 357 1.3E-112 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 XFC3_10260 ab327cbf9d3e23974c12963d6de2453a 364 SUPERFAMILY SSF53927 8 149 1.52E-46 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XFC3_10260 ab327cbf9d3e23974c12963d6de2453a 364 Gene3D G3DSA:3.40.430.10 146 362 1.6E-64 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XFC3_10260 ab327cbf9d3e23974c12963d6de2453a 364 PIRSF PIRSF006769 4 361 7.1E-122 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 XFC3_10260 ab327cbf9d3e23974c12963d6de2453a 364 Gene3D G3DSA:3.40.140.10 3 145 1.5E-44 T 11-10-2018 XFC3_10260 ab327cbf9d3e23974c12963d6de2453a 364 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 360 4.0E-53 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 XFC3_10260 ab327cbf9d3e23974c12963d6de2453a 364 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 104 2.3E-19 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain XFC3_01105 c2bb3552a10bf0553a6abff51bbd2db8 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 176 3.0E-99 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 XFC3_01105 c2bb3552a10bf0553a6abff51bbd2db8 185 SUPERFAMILY SSF51182 2 175 6.16E-71 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily XFC3_01105 c2bb3552a10bf0553a6abff51bbd2db8 185 Gene3D G3DSA:2.60.120.10 1 184 1.4E-67 T 11-10-2018 IPR014710 RmlC-like jelly roll fold XFC3_01105 c2bb3552a10bf0553a6abff51bbd2db8 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 173 4.3E-69 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 XFC3_01105 c2bb3552a10bf0553a6abff51bbd2db8 185 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 175 8.5E-86 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 Gene3D G3DSA:3.30.260.10 136 410 1.2E-236 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 Gene3D G3DSA:1.10.560.10 8 521 1.2E-236 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 Hamap MF_00600 60 kDa chaperonin [groL]. 2 548 40.967 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.8E-253 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 SUPERFAMILY SSF52029 184 376 5.41E-83 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 PRINTS PR00298 60kDa chaperonin signature 27 53 1.3E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 PRINTS PR00298 60kDa chaperonin signature 83 110 1.3E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 PRINTS PR00298 60kDa chaperonin signature 350 375 1.3E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 PRINTS PR00298 60kDa chaperonin signature 268 291 1.3E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 PRINTS PR00298 60kDa chaperonin signature 398 419 1.3E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 SUPERFAMILY SSF48592 7 521 2.5E-77 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 Gene3D G3DSA:3.50.7.10 192 372 1.2E-236 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 4.6E-96 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 XFC3_02305 ed708ff72e80cda27787e56d90becbc4 550 SUPERFAMILY SSF54849 137 204 1.79E-25 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily XFC3_12215 c43eb28db37adc085a7fd0c42dad01cd 868 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 165 2.3E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFC3_12215 c43eb28db37adc085a7fd0c42dad01cd 868 Pfam PF00593 TonB dependent receptor 403 867 2.2E-42 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFC3_12215 c43eb28db37adc085a7fd0c42dad01cd 868 Gene3D G3DSA:2.170.130.10 26 170 1.0E-15 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFC3_12215 c43eb28db37adc085a7fd0c42dad01cd 868 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 34 868 2.3E-233 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor XFC3_12215 c43eb28db37adc085a7fd0c42dad01cd 868 Gene3D G3DSA:2.40.170.20 262 868 9.7E-51 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XFC3_12215 c43eb28db37adc085a7fd0c42dad01cd 868 SUPERFAMILY SSF56935 25 868 8.96E-95 T 11-10-2018 XFC3_04280 dfd187089a15a051c9fe2d4498405668 645 SUPERFAMILY SSF52540 2 238 3.58E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_04280 dfd187089a15a051c9fe2d4498405668 645 Pfam PF00005 ABC transporter 17 178 2.6E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_04280 dfd187089a15a051c9fe2d4498405668 645 Pfam PF12848 ABC transporter 217 293 5.7E-24 T 11-10-2018 IPR032781 ABC-transporter extension domain XFC3_04280 dfd187089a15a051c9fe2d4498405668 645 Pfam PF00005 ABC transporter 350 481 1.5E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_04280 dfd187089a15a051c9fe2d4498405668 645 Gene3D G3DSA:3.40.50.300 275 561 2.4E-46 T 11-10-2018 XFC3_04280 dfd187089a15a051c9fe2d4498405668 645 Gene3D G3DSA:3.40.50.300 1 259 5.1E-60 T 11-10-2018 XFC3_04280 dfd187089a15a051c9fe2d4498405668 645 SMART SM00382 26 223 7.9E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_04280 dfd187089a15a051c9fe2d4498405668 645 SMART SM00382 359 524 2.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_04280 dfd187089a15a051c9fe2d4498405668 645 SUPERFAMILY SSF52540 347 530 3.93E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_04280 dfd187089a15a051c9fe2d4498405668 645 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_04280 dfd187089a15a051c9fe2d4498405668 645 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_08470 e87a55f96300ec57090b0b2afe24df26 373 SMART SM00729 97 305 7.7E-17 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XFC3_08470 e87a55f96300ec57090b0b2afe24df26 373 SUPERFAMILY SSF102114 68 332 4.05E-67 T 11-10-2018 XFC3_08470 e87a55f96300ec57090b0b2afe24df26 373 Pfam PF04055 Radical SAM superfamily 103 267 1.3E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XFC3_08470 e87a55f96300ec57090b0b2afe24df26 373 TIGRFAM TIGR00510 lipA: lipoyl synthase 48 330 1.2E-131 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XFC3_08470 e87a55f96300ec57090b0b2afe24df26 373 Gene3D G3DSA:3.20.20.70 94 290 6.0E-23 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_08470 e87a55f96300ec57090b0b2afe24df26 373 PIRSF PIRSF005963 1 352 1.1E-140 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XFC3_08470 e87a55f96300ec57090b0b2afe24df26 373 Hamap MF_00206 Lipoyl synthase [lipA]. 50 339 148.988 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XFC3_08470 e87a55f96300ec57090b0b2afe24df26 373 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 49 86 2.6E-8 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XFC3_01100 750938a14191237d1ba81130fea57d54 295 Gene3D G3DSA:3.90.550.10 1 294 1.7E-77 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_01100 750938a14191237d1ba81130fea57d54 295 Pfam PF00483 Nucleotidyl transferase 5 240 7.1E-65 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XFC3_01100 750938a14191237d1ba81130fea57d54 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 289 1.8E-155 T 11-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 XFC3_01100 750938a14191237d1ba81130fea57d54 295 SUPERFAMILY SSF53448 4 289 7.43E-85 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_08255 1ab4b9dfc24776d0c12e0dfca29aa08b 85 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 81 1.3E-25 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 XFC3_08255 1ab4b9dfc24776d0c12e0dfca29aa08b 85 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 17.049 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 XFC3_08255 1ab4b9dfc24776d0c12e0dfca29aa08b 85 Pfam PF03776 Septum formation topological specificity factor MinE 13 80 3.0E-21 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 XFC3_08255 1ab4b9dfc24776d0c12e0dfca29aa08b 85 Gene3D G3DSA:3.30.1070.10 19 78 2.8E-24 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 XFC3_08255 1ab4b9dfc24776d0c12e0dfca29aa08b 85 SUPERFAMILY SSF55229 32 82 9.15E-13 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 XFC3_07830 2f9eae5de17c7e35ee6f2327c60bc148 123 Pfam PF13986 Domain of unknown function (DUF4224) 30 72 3.4E-16 T 11-10-2018 IPR025319 Domain of unknown function DUF4224 XFC3_10430 35610dce9e3f5acd22184924e221070c 253 PRINTS PR00603 Cytochrome C1 signature 199 218 3.0E-10 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 XFC3_10430 35610dce9e3f5acd22184924e221070c 253 PRINTS PR00603 Cytochrome C1 signature 52 71 3.0E-10 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 XFC3_10430 35610dce9e3f5acd22184924e221070c 253 PRINTS PR00603 Cytochrome C1 signature 114 138 3.0E-10 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 XFC3_10430 35610dce9e3f5acd22184924e221070c 253 Pfam PF02167 Cytochrome C1 family 44 251 6.0E-24 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 XFC3_10430 35610dce9e3f5acd22184924e221070c 253 Gene3D G3DSA:1.10.760.10 36 218 6.4E-24 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 XFC3_10430 35610dce9e3f5acd22184924e221070c 253 SUPERFAMILY SSF46626 27 217 2.06E-46 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 XFC3_12225 21ae2aaa18b478c4c14376b1fee9d37e 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 8.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XFC3_12225 21ae2aaa18b478c4c14376b1fee9d37e 189 SUPERFAMILY SSF46689 3 76 3.29E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFC3_12225 21ae2aaa18b478c4c14376b1fee9d37e 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.9E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XFC3_12225 21ae2aaa18b478c4c14376b1fee9d37e 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.9E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XFC3_12225 21ae2aaa18b478c4c14376b1fee9d37e 189 Gene3D G3DSA:1.10.357.10 1 189 9.2E-53 T 11-10-2018 XFC3_05920 2fd257833da64cabe27fb6ab3fa0425c 469 SUPERFAMILY SSF55931 103 467 5.59E-130 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 XFC3_05920 2fd257833da64cabe27fb6ab3fa0425c 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.1E-131 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XFC3_05920 2fd257833da64cabe27fb6ab3fa0425c 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 XFC3_05920 2fd257833da64cabe27fb6ab3fa0425c 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 467 7.0E-193 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XFC3_05920 2fd257833da64cabe27fb6ab3fa0425c 469 SUPERFAMILY SSF54368 3 100 4.58E-36 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XFC3_05920 2fd257833da64cabe27fb6ab3fa0425c 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.8E-29 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 XFC3_05920 2fd257833da64cabe27fb6ab3fa0425c 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 XFC3_05920 2fd257833da64cabe27fb6ab3fa0425c 469 Gene3D G3DSA:3.30.590.10 105 457 1.0E-138 T 11-10-2018 XFC3_05920 2fd257833da64cabe27fb6ab3fa0425c 469 Gene3D G3DSA:3.10.20.70 2 104 1.1E-37 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XFC3_05920 2fd257833da64cabe27fb6ab3fa0425c 469 SMART SM01230 102 379 2.3E-136 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XFC3_00565 2455efe7cc1f7dfcd49b1509dfc5c7ce 491 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 21 144 1.0E-30 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XFC3_00565 2455efe7cc1f7dfcd49b1509dfc5c7ce 491 Gene3D G3DSA:3.40.220.10 3 163 4.7E-43 T 11-10-2018 XFC3_00565 2455efe7cc1f7dfcd49b1509dfc5c7ce 491 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 344 351 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XFC3_00565 2455efe7cc1f7dfcd49b1509dfc5c7ce 491 SUPERFAMILY SSF52949 3 181 1.29E-40 T 11-10-2018 XFC3_00565 2455efe7cc1f7dfcd49b1509dfc5c7ce 491 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 183 483 6.0E-118 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XFC3_00565 2455efe7cc1f7dfcd49b1509dfc5c7ce 491 PRINTS PR00481 Cytosol aminopeptidase signature 259 276 3.0E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFC3_00565 2455efe7cc1f7dfcd49b1509dfc5c7ce 491 PRINTS PR00481 Cytosol aminopeptidase signature 368 383 3.0E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFC3_00565 2455efe7cc1f7dfcd49b1509dfc5c7ce 491 PRINTS PR00481 Cytosol aminopeptidase signature 318 339 3.0E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFC3_00565 2455efe7cc1f7dfcd49b1509dfc5c7ce 491 PRINTS PR00481 Cytosol aminopeptidase signature 340 360 3.0E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFC3_00565 2455efe7cc1f7dfcd49b1509dfc5c7ce 491 PRINTS PR00481 Cytosol aminopeptidase signature 281 302 3.0E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFC3_00565 2455efe7cc1f7dfcd49b1509dfc5c7ce 491 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 5 490 34.748 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 XFC3_00565 2455efe7cc1f7dfcd49b1509dfc5c7ce 491 SUPERFAMILY SSF53187 176 489 2.92E-119 T 11-10-2018 XFC3_00565 2455efe7cc1f7dfcd49b1509dfc5c7ce 491 Gene3D G3DSA:3.40.630.10 176 491 1.3E-138 T 11-10-2018 XFC3_02710 e75303646e646f483e5050d626a03ec7 533 Pfam PF10091 Putative glucoamylase 225 471 1.2E-86 T 11-10-2018 IPR019282 Domain of unknown function DUF2329 XFC3_02710 e75303646e646f483e5050d626a03ec7 533 Gene3D G3DSA:1.50.10.140 52 492 2.2E-159 T 11-10-2018 XFC3_02710 e75303646e646f483e5050d626a03ec7 533 PIRSF PIRSF028431 12 498 5.6E-196 T 11-10-2018 IPR016883 Uncharacterised conserved protein UCP028431 XFC3_06655 6bd61d8279ac258029fb96e1097ed72c 251 Gene3D G3DSA:2.40.50.40 136 202 1.9E-9 T 11-10-2018 XFC3_06655 6bd61d8279ac258029fb96e1097ed72c 251 SMART SM00850 145 242 9.7E-24 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 XFC3_06655 6bd61d8279ac258029fb96e1097ed72c 251 Pfam PF04397 LytTr DNA-binding domain 147 241 5.9E-22 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 XFC3_06655 6bd61d8279ac258029fb96e1097ed72c 251 SUPERFAMILY SSF52172 1 119 6.55E-33 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_06655 6bd61d8279ac258029fb96e1097ed72c 251 SMART SM00448 1 113 7.1E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_06655 6bd61d8279ac258029fb96e1097ed72c 251 Pfam PF00072 Response regulator receiver domain 3 113 1.3E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_06655 6bd61d8279ac258029fb96e1097ed72c 251 Gene3D G3DSA:3.40.50.2300 1 123 3.9E-34 T 11-10-2018 XFC3_09480 4233665bba8aff808841597d132658ae 164 SMART SM00529 64 163 2.3E-29 T 11-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 XFC3_09480 4233665bba8aff808841597d132658ae 164 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 103 159 3.4E-11 T 11-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 XFC3_09480 4233665bba8aff808841597d132658ae 164 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 46 99 6.4E-11 T 11-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 XFC3_09480 4233665bba8aff808841597d132658ae 164 Gene3D G3DSA:1.10.60.10 103 162 7.1E-22 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 XFC3_09480 4233665bba8aff808841597d132658ae 164 SUPERFAMILY SSF46785 45 102 3.09E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_09480 4233665bba8aff808841597d132658ae 164 SUPERFAMILY SSF47979 103 158 2.35E-12 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 XFC3_09480 4233665bba8aff808841597d132658ae 164 Gene3D G3DSA:1.10.10.10 32 102 9.5E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_08220 22e4f8586b03adcc130a6452348e1724 189 Pfam PF04264 YceI-like domain 47 181 1.9E-24 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XFC3_08220 22e4f8586b03adcc130a6452348e1724 189 SMART SM00867 29 187 7.9E-32 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XFC3_08220 22e4f8586b03adcc130a6452348e1724 189 Gene3D G3DSA:2.40.128.110 48 189 1.2E-29 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XFC3_08220 22e4f8586b03adcc130a6452348e1724 189 SUPERFAMILY SSF101874 31 187 2.49E-33 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XFC3_08620 7637ee69fe6203723e1ece29e0fee838 833 SMART SM00847 385 481 4.4E-11 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 XFC3_08620 7637ee69fe6203723e1ece29e0fee838 833 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 6 830 0.0 T 11-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 XFC3_08620 7637ee69fe6203723e1ece29e0fee838 833 Pfam PF08482 ATP-dependent helicase C-terminal 682 819 4.2E-50 T 11-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal XFC3_08620 7637ee69fe6203723e1ece29e0fee838 833 Pfam PF04408 Helicase associated domain (HA2) 386 450 9.7E-16 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 XFC3_08620 7637ee69fe6203723e1ece29e0fee838 833 SMART SM00487 4 190 4.4E-13 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_08620 7637ee69fe6203723e1ece29e0fee838 833 PIRSF PIRSF005496 1 833 0.0 T 11-10-2018 XFC3_08620 7637ee69fe6203723e1ece29e0fee838 833 SMART SM00490 232 330 5.3E-16 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_08620 7637ee69fe6203723e1ece29e0fee838 833 Gene3D G3DSA:1.20.120.1080 369 457 1.8E-9 T 11-10-2018 XFC3_08620 7637ee69fe6203723e1ece29e0fee838 833 Gene3D G3DSA:3.40.50.300 1 181 5.8E-52 T 11-10-2018 XFC3_08620 7637ee69fe6203723e1ece29e0fee838 833 SUPERFAMILY SSF52540 18 341 2.79E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08620 7637ee69fe6203723e1ece29e0fee838 833 Pfam PF00271 Helicase conserved C-terminal domain 210 329 2.8E-16 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_08620 7637ee69fe6203723e1ece29e0fee838 833 Gene3D G3DSA:3.40.50.300 182 347 1.9E-51 T 11-10-2018 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 Gene3D G3DSA:3.40.50.20 1 116 1.2E-48 T 11-10-2018 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1074 13.45 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 SMART SM00851 962 1048 1.0E-28 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 428 548 2.1E-37 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 Gene3D G3DSA:3.40.50.20 555 663 4.8E-49 T 11-10-2018 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 Gene3D G3DSA:3.40.50.1380 945 1079 6.3E-37 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.304 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1059 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 SUPERFAMILY SSF56059 128 401 4.42E-108 T 11-10-2018 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 Gene3D G3DSA:3.30.470.20 119 403 9.9E-128 T 11-10-2018 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.2E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.2E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.2E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.2E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.2E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.2E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.2E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 882 1.4E-38 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 7.8E-71 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 SUPERFAMILY SSF52440 558 676 2.01E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 SUPERFAMILY SSF52440 1 127 2.73E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 SUPERFAMILY SSF56059 674 939 6.72E-101 T 11-10-2018 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 SUPERFAMILY SSF48108 396 555 1.28E-48 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 Pfam PF02142 MGS-like domain 963 1047 1.2E-16 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 SUPERFAMILY SSF52335 944 1077 5.36E-38 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 Gene3D G3DSA:3.30.470.20 666 942 3.2E-113 T 11-10-2018 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 Gene3D G3DSA:1.10.1030.10 404 554 4.1E-45 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_09150 c59dfa69550d0d9d794147a6aac44f6a 1080 SMART SM01096 425 548 6.0E-69 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFC3_08180 a0f3034934cffb38bd5e7fb3f830bf91 199 SUPERFAMILY SSF50475 4 199 5.3E-55 T 11-10-2018 XFC3_08180 a0f3034934cffb38bd5e7fb3f830bf91 199 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 158 199 4.5E-10 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XFC3_08180 a0f3034934cffb38bd5e7fb3f830bf91 199 Gene3D G3DSA:2.30.110.10 3 199 6.3E-66 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 XFC3_08180 a0f3034934cffb38bd5e7fb3f830bf91 199 PIRSF PIRSF000190 3 199 1.2E-61 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XFC3_08180 a0f3034934cffb38bd5e7fb3f830bf91 199 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 4 199 33.733 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XFC3_08180 a0f3034934cffb38bd5e7fb3f830bf91 199 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 168 181 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XFC3_08180 a0f3034934cffb38bd5e7fb3f830bf91 199 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 5 193 9.6E-58 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XFC3_08180 a0f3034934cffb38bd5e7fb3f830bf91 199 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 26 104 9.1E-25 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XFC3_04485 b68ee94a835e6cf406c788a4eb612379 368 Gene3D G3DSA:2.40.420.20 38 351 1.2E-58 T 11-10-2018 XFC3_04485 b68ee94a835e6cf406c788a4eb612379 368 SUPERFAMILY SSF111369 49 260 2.35E-20 T 11-10-2018 XFC3_04485 b68ee94a835e6cf406c788a4eb612379 368 Gene3D G3DSA:2.40.30.170 45 279 1.2E-58 T 11-10-2018 XFC3_04485 b68ee94a835e6cf406c788a4eb612379 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 355 6.7E-61 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XFC3_04485 b68ee94a835e6cf406c788a4eb612379 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 260 4.3E-14 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XFC3_04485 b68ee94a835e6cf406c788a4eb612379 368 Gene3D G3DSA:2.40.50.100 59 205 1.2E-58 T 11-10-2018 XFC3_04485 b68ee94a835e6cf406c788a4eb612379 368 Gene3D G3DSA:1.10.287.470 93 165 1.2E-58 T 11-10-2018 XFC3_11890 7ce614eae2ae07315e0a49615d491959 155 SUPERFAMILY SSF47973 3 148 3.92E-58 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily XFC3_11890 7ce614eae2ae07315e0a49615d491959 155 Pfam PF00177 Ribosomal protein S7p/S5e 1 148 4.7E-65 T 11-10-2018 IPR023798 Ribosomal protein S7 domain XFC3_11890 7ce614eae2ae07315e0a49615d491959 155 PIRSF PIRSF002122 2 155 1.6E-62 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 XFC3_11890 7ce614eae2ae07315e0a49615d491959 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 35.697 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 XFC3_11890 7ce614eae2ae07315e0a49615d491959 155 Gene3D G3DSA:1.10.455.10 2 154 6.9E-59 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily XFC3_11890 7ce614eae2ae07315e0a49615d491959 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 5.9E-66 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 XFC3_11890 7ce614eae2ae07315e0a49615d491959 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_05110 731912ad369fdf77ac4a5b86db4877ec 212 SUPERFAMILY SSF53335 31 211 1.16E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_05110 731912ad369fdf77ac4a5b86db4877ec 212 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 20 208 26.129 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XFC3_05110 731912ad369fdf77ac4a5b86db4877ec 212 Pfam PF02527 rRNA small subunit methyltransferase G 31 207 2.6E-52 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XFC3_05110 731912ad369fdf77ac4a5b86db4877ec 212 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 211 7.7E-59 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XFC3_05110 731912ad369fdf77ac4a5b86db4877ec 212 PIRSF PIRSF003078 1 212 1.0E-63 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XFC3_05110 731912ad369fdf77ac4a5b86db4877ec 212 Gene3D G3DSA:3.40.50.150 10 212 3.8E-60 T 11-10-2018 XFC3_02095 6a4ab50faedd8a7c53a80d2ec6e8979d 71 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 67 20.13 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 XFC3_02095 6a4ab50faedd8a7c53a80d2ec6e8979d 71 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 9.9E-22 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 XFC3_02095 6a4ab50faedd8a7c53a80d2ec6e8979d 71 Pfam PF02416 mttA/Hcf106 family 5 48 4.0E-15 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 XFC3_00470 f7e65b6bce1e20e0a506624178298acb 118 SUPERFAMILY SSF52833 1 114 4.48E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_00470 f7e65b6bce1e20e0a506624178298acb 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 111 1.4E-25 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR XFC3_00470 f7e65b6bce1e20e0a506624178298acb 118 Pfam PF03960 ArsC family 7 113 1.6E-13 T 11-10-2018 IPR006660 Arsenate reductase-like XFC3_00470 f7e65b6bce1e20e0a506624178298acb 118 Gene3D G3DSA:3.40.30.10 1 115 1.3E-32 T 11-10-2018 XFC3_09485 818d2f2ba6197e8ccd8aa07b9dec7e6f 167 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 17 160 43.618 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 XFC3_09485 818d2f2ba6197e8ccd8aa07b9dec7e6f 167 SUPERFAMILY SSF53927 8 161 1.51E-53 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XFC3_09485 818d2f2ba6197e8ccd8aa07b9dec7e6f 167 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 13 112 2.8E-24 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain XFC3_09485 818d2f2ba6197e8ccd8aa07b9dec7e6f 167 Gene3D G3DSA:3.40.140.10 10 165 6.6E-54 T 11-10-2018 XFC3_09485 818d2f2ba6197e8ccd8aa07b9dec7e6f 167 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 64 101 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 XFC3_02330 ad2c73bc804dd661a09b3414404dd6af 282 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 3 274 31.945 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 XFC3_02330 ad2c73bc804dd661a09b3414404dd6af 282 SUPERFAMILY SSF51735 103 273 2.02E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_02330 ad2c73bc804dd661a09b3414404dd6af 282 Gene3D G3DSA:3.40.50.10860 6 263 1.8E-74 T 11-10-2018 XFC3_02330 ad2c73bc804dd661a09b3414404dd6af 282 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 192 7.3E-10 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase XFC3_02330 ad2c73bc804dd661a09b3414404dd6af 282 SUPERFAMILY SSF53223 4 102 2.59E-30 T 11-10-2018 XFC3_02330 ad2c73bc804dd661a09b3414404dd6af 282 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 6 274 2.0E-71 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 XFC3_02330 ad2c73bc804dd661a09b3414404dd6af 282 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 8 90 8.6E-27 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 XFC3_02330 ad2c73bc804dd661a09b3414404dd6af 282 Gene3D G3DSA:3.40.50.720 102 242 1.8E-74 T 11-10-2018 XFC3_01765 94d62700e2d96f37495aa441cff50a4d 1121 Gene3D G3DSA:1.10.10.160 88 182 2.8E-55 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily XFC3_01765 94d62700e2d96f37495aa441cff50a4d 1121 PIRSF PIRSF000980 9 1112 0.0 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 XFC3_01765 94d62700e2d96f37495aa441cff50a4d 1121 Gene3D G3DSA:3.40.50.300 319 789 4.2E-126 T 11-10-2018 XFC3_01765 94d62700e2d96f37495aa441cff50a4d 1121 Gene3D G3DSA:3.40.50.10930 12 284 2.8E-55 T 11-10-2018 XFC3_01765 94d62700e2d96f37495aa441cff50a4d 1121 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 10 789 1.4E-219 T 11-10-2018 XFC3_01765 94d62700e2d96f37495aa441cff50a4d 1121 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 9 1111 15.967 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 XFC3_01765 94d62700e2d96f37495aa441cff50a4d 1121 SUPERFAMILY SSF52980 805 1103 1.66E-52 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XFC3_01765 94d62700e2d96f37495aa441cff50a4d 1121 Gene3D G3DSA:1.10.486.10 439 650 4.2E-126 T 11-10-2018 XFC3_01765 94d62700e2d96f37495aa441cff50a4d 1121 SUPERFAMILY SSF52540 10 331 2.55E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01765 94d62700e2d96f37495aa441cff50a4d 1121 SUPERFAMILY SSF52540 345 795 4.25E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01765 94d62700e2d96f37495aa441cff50a4d 1121 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 10 1071 0.0 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 XFC3_00370 c771c8d1f194a93094ee4e8072a6a42a 298 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 56 69 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XFC3_00370 c771c8d1f194a93094ee4e8072a6a42a 298 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 22 276 1.1E-94 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 XFC3_00370 c771c8d1f194a93094ee4e8072a6a42a 298 Gene3D G3DSA:3.20.20.20 1 284 1.1E-107 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XFC3_00370 c771c8d1f194a93094ee4e8072a6a42a 298 SUPERFAMILY SSF51717 10 278 3.53E-98 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XFC3_00370 c771c8d1f194a93094ee4e8072a6a42a 298 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XFC3_00370 c771c8d1f194a93094ee4e8072a6a42a 298 Pfam PF00809 Pterin binding enzyme 23 262 6.1E-79 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XFC3_10385 d22c79dad3d0980598128a148d7e0541 187 Pfam PF01300 Telomere recombination 13 185 1.1E-39 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 XFC3_10385 d22c79dad3d0980598128a148d7e0541 187 SUPERFAMILY SSF55821 7 185 4.58E-49 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XFC3_10385 d22c79dad3d0980598128a148d7e0541 187 Gene3D G3DSA:3.90.870.10 2 186 8.9E-52 T 11-10-2018 XFC3_10385 d22c79dad3d0980598128a148d7e0541 187 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 186 38.056 T 11-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 XFC3_01535 5f0c724fe9cfb8c8c7507278294b825d 240 Gene3D G3DSA:3.30.1330.60 89 234 5.4E-47 T 11-10-2018 IPR036737 OmpA-like domain superfamily XFC3_01535 5f0c724fe9cfb8c8c7507278294b825d 240 Pfam PF13488 Glycine zipper 50 95 1.5E-11 T 11-10-2018 IPR039567 Glycine zipper domain XFC3_01535 5f0c724fe9cfb8c8c7507278294b825d 240 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 189 208 1.6E-9 T 11-10-2018 XFC3_01535 5f0c724fe9cfb8c8c7507278294b825d 240 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 209 229 1.6E-9 T 11-10-2018 XFC3_01535 5f0c724fe9cfb8c8c7507278294b825d 240 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 171 188 1.6E-9 T 11-10-2018 XFC3_01535 5f0c724fe9cfb8c8c7507278294b825d 240 ProSitePatterns PS01068 OmpA-like domain. 158 202 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 XFC3_01535 5f0c724fe9cfb8c8c7507278294b825d 240 Pfam PF00691 OmpA family 125 220 2.4E-22 T 11-10-2018 IPR006665 OmpA-like domain XFC3_01535 5f0c724fe9cfb8c8c7507278294b825d 240 PRINTS PR01021 OMPA domain signature 171 187 1.1E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFC3_01535 5f0c724fe9cfb8c8c7507278294b825d 240 PRINTS PR01021 OMPA domain signature 126 148 1.1E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFC3_01535 5f0c724fe9cfb8c8c7507278294b825d 240 PRINTS PR01021 OMPA domain signature 156 171 1.1E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFC3_01535 5f0c724fe9cfb8c8c7507278294b825d 240 SUPERFAMILY SSF103088 113 228 1.44E-39 T 11-10-2018 IPR036737 OmpA-like domain superfamily XFC3_03005 bde6dc87022a8c4c71676c84f383c707 275 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 15 123 1.4E-42 T 11-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XFC3_03005 bde6dc87022a8c4c71676c84f383c707 275 Pfam PF14489 QueF-like protein 187 263 1.3E-27 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XFC3_03005 bde6dc87022a8c4c71676c84f383c707 275 Gene3D G3DSA:3.30.1130.10 15 127 2.3E-39 T 11-10-2018 XFC3_03005 bde6dc87022a8c4c71676c84f383c707 275 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 275 128.003 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XFC3_03005 bde6dc87022a8c4c71676c84f383c707 275 PIRSF PIRSF004750 1 275 9.7E-103 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XFC3_03005 bde6dc87022a8c4c71676c84f383c707 275 SUPERFAMILY SSF55620 174 263 9.64E-11 T 11-10-2018 XFC3_03005 bde6dc87022a8c4c71676c84f383c707 275 TIGRFAM TIGR03138 QueF: queuine synthase 4 275 3.5E-103 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XFC3_03005 bde6dc87022a8c4c71676c84f383c707 275 Gene3D G3DSA:3.30.1130.10 133 275 5.3E-48 T 11-10-2018 XFC3_09245 6ad9a856165247dd8c47e7e03946b2ed 240 SMART SM00382 43 231 8.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_09245 6ad9a856165247dd8c47e7e03946b2ed 240 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 14 233 1.7E-104 T 11-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 XFC3_09245 6ad9a856165247dd8c47e7e03946b2ed 240 Pfam PF00005 ABC transporter 35 182 1.4E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_09245 6ad9a856165247dd8c47e7e03946b2ed 240 Gene3D G3DSA:3.40.50.300 12 240 9.9E-59 T 11-10-2018 XFC3_09245 6ad9a856165247dd8c47e7e03946b2ed 240 SUPERFAMILY SSF52540 14 236 2.34E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_09245 6ad9a856165247dd8c47e7e03946b2ed 240 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_02790 a6d54e37e8fdf6c23abf242e032865aa 296 Gene3D G3DSA:3.90.550.10 1 292 2.4E-82 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_02790 a6d54e37e8fdf6c23abf242e032865aa 296 SUPERFAMILY SSF53448 5 280 3.6E-62 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_02790 a6d54e37e8fdf6c23abf242e032865aa 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 267 5.8E-107 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 XFC3_02790 a6d54e37e8fdf6c23abf242e032865aa 296 Pfam PF00483 Nucleotidyl transferase 12 271 8.7E-30 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XFC3_04195 46311424260c09d38912380e4cb40a5a 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 82 314 3.3E-43 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 XFC3_04195 46311424260c09d38912380e4cb40a5a 350 SUPERFAMILY SSF53756 8 343 2.2E-73 T 11-10-2018 XFC3_04195 46311424260c09d38912380e4cb40a5a 350 Gene3D G3DSA:3.40.50.2000 3 154 9.5E-20 T 11-10-2018 XFC3_04195 46311424260c09d38912380e4cb40a5a 350 Gene3D G3DSA:3.40.50.2000 160 342 1.8E-35 T 11-10-2018 XFC3_11630 5dde0ee8def9ea9424ff6b1de4bd9566 76 SUPERFAMILY SSF46911 3 74 1.05E-28 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11630 5dde0ee8def9ea9424ff6b1de4bd9566 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 9.2E-36 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11630 5dde0ee8def9ea9424ff6b1de4bd9566 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11630 5dde0ee8def9ea9424ff6b1de4bd9566 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 5.0E-23 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11630 5dde0ee8def9ea9424ff6b1de4bd9566 76 Gene3D G3DSA:4.10.640.10 20 75 1.3E-26 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11630 5dde0ee8def9ea9424ff6b1de4bd9566 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.951 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11630 5dde0ee8def9ea9424ff6b1de4bd9566 76 Pfam PF01084 Ribosomal protein S18 18 68 1.5E-24 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11630 5dde0ee8def9ea9424ff6b1de4bd9566 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11630 5dde0ee8def9ea9424ff6b1de4bd9566 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11630 5dde0ee8def9ea9424ff6b1de4bd9566 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11630 5dde0ee8def9ea9424ff6b1de4bd9566 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_07960 85daa8092ac0d2412a029070d4345998 319 Gene3D G3DSA:1.10.287.90 28 113 9.2E-33 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07960 85daa8092ac0d2412a029070d4345998 319 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 16 240 7.9E-112 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 XFC3_07960 85daa8092ac0d2412a029070d4345998 319 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 224 4.1E-8 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07960 85daa8092ac0d2412a029070d4345998 319 PIRSF PIRSF000292 2 315 2.6E-133 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 XFC3_07960 85daa8092ac0d2412a029070d4345998 319 Pfam PF06481 COX Aromatic Rich Motif 240 288 1.2E-15 T 11-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 XFC3_07960 85daa8092ac0d2412a029070d4345998 319 SUPERFAMILY SSF81464 30 117 3.92E-22 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07960 85daa8092ac0d2412a029070d4345998 319 SUPERFAMILY SSF49503 122 285 1.22E-48 T 11-10-2018 IPR008972 Cupredoxin XFC3_07960 85daa8092ac0d2412a029070d4345998 319 Gene3D G3DSA:2.60.40.420 114 285 5.3E-57 T 11-10-2018 IPR008972 Cupredoxin XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 Gene3D G3DSA:1.20.200.10 136 402 4.0E-100 T 11-10-2018 XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 Gene3D G3DSA:1.10.275.10 8 135 4.0E-50 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 PRINTS PR00145 Argininosuccinate lyase family signature 314 330 1.2E-6 T 11-10-2018 XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 PRINTS PR00145 Argininosuccinate lyase family signature 130 152 1.2E-6 T 11-10-2018 XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 PRINTS PR00145 Argininosuccinate lyase family signature 172 192 1.2E-6 T 11-10-2018 XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 SUPERFAMILY SSF48557 8 457 2.51E-140 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 PRINTS PR00149 Fumarate lyase superfamily signature 177 195 3.6E-32 T 11-10-2018 IPR000362 Fumarate lyase family XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 PRINTS PR00149 Fumarate lyase superfamily signature 131 149 3.6E-32 T 11-10-2018 IPR000362 Fumarate lyase family XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 PRINTS PR00149 Fumarate lyase superfamily signature 268 295 3.6E-32 T 11-10-2018 IPR000362 Fumarate lyase family XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 PRINTS PR00149 Fumarate lyase superfamily signature 314 330 3.6E-32 T 11-10-2018 IPR000362 Fumarate lyase family XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 Gene3D G3DSA:1.10.40.30 405 456 3.3E-17 T 11-10-2018 XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 Pfam PF00206 Lyase 16 339 4.3E-95 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 Pfam PF10415 Fumarase C C-terminus 405 457 2.7E-17 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 ProSitePatterns PS00163 Fumarate lyases signature. 314 323 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 XFC3_06960 fcc7ed069a653f50db2a0e9e46f0b618 469 Hamap MF_00743 Fumarate hydratase class II [fumC]. 7 459 81.287 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFC3_08855 a9e994091f0238af32f3ddc0cfe30862 130 Gene3D G3DSA:3.30.420.80 2 130 2.5E-51 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 XFC3_08855 a9e994091f0238af32f3ddc0cfe30862 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site XFC3_08855 a9e994091f0238af32f3ddc0cfe30862 130 SUPERFAMILY SSF53137 17 130 2.55E-45 T 11-10-2018 XFC3_08855 a9e994091f0238af32f3ddc0cfe30862 130 PIRSF PIRSF002131 1 130 4.6E-51 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 XFC3_08855 a9e994091f0238af32f3ddc0cfe30862 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 31.734 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 XFC3_08855 a9e994091f0238af32f3ddc0cfe30862 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 1.7E-52 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08855 a9e994091f0238af32f3ddc0cfe30862 130 Pfam PF00411 Ribosomal protein S11 20 129 1.0E-48 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 Pfam PF03129 Anticodon binding domain 471 561 2.5E-12 T 11-10-2018 IPR004154 Anticodon-binding XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 SUPERFAMILY SSF52954 460 562 3.44E-23 T 11-10-2018 XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 Pfam PF04073 Aminoacyl-tRNA editing domain 256 375 1.3E-24 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 Gene3D G3DSA:3.40.50.800 4 548 2.4E-222 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 Gene3D G3DSA:3.30.930.10 11 461 2.4E-222 T 11-10-2018 XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 SUPERFAMILY SSF55826 218 386 3.79E-29 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 563 38.889 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 559 4.3E-209 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 Gene3D G3DSA:3.90.960.10 240 386 2.4E-222 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 SUPERFAMILY SSF55681 10 474 3.02E-101 T 11-10-2018 XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 2.1E-44 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.9E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.9E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.9E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XFC3_01850 89834f88b580a6cf3dfb9b772af6cb35 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.9E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XFC3_03290 a0f9538b0b7e15018b22d7ddff3809b2 621 Gene3D G3DSA:3.40.1440.10 10 106 7.6E-29 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 XFC3_03290 a0f9538b0b7e15018b22d7ddff3809b2 621 Pfam PF01541 GIY-YIG catalytic domain 23 97 2.9E-7 T 11-10-2018 IPR000305 GIY-YIG endonuclease XFC3_03290 a0f9538b0b7e15018b22d7ddff3809b2 621 Gene3D G3DSA:1.10.150.20 553 607 1.0E-20 T 11-10-2018 XFC3_03290 a0f9538b0b7e15018b22d7ddff3809b2 621 SUPERFAMILY SSF82771 20 104 1.57E-19 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 XFC3_03290 a0f9538b0b7e15018b22d7ddff3809b2 621 Gene3D G3DSA:3.30.420.340 375 550 6.3E-47 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily XFC3_03290 a0f9538b0b7e15018b22d7ddff3809b2 621 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 384 540 1.6E-47 T 11-10-2018 IPR001162 UvrC family homology region XFC3_03290 a0f9538b0b7e15018b22d7ddff3809b2 621 SMART SM00465 21 102 1.1E-16 T 11-10-2018 IPR000305 GIY-YIG endonuclease XFC3_03290 a0f9538b0b7e15018b22d7ddff3809b2 621 SUPERFAMILY SSF46600 193 246 1.14E-11 T 11-10-2018 IPR036876 UVR domain superfamily XFC3_03290 a0f9538b0b7e15018b22d7ddff3809b2 621 SUPERFAMILY SSF47781 521 607 6.35E-20 T 11-10-2018 IPR010994 RuvA domain 2-like XFC3_03290 a0f9538b0b7e15018b22d7ddff3809b2 621 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 605 26.68 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 XFC3_03290 a0f9538b0b7e15018b22d7ddff3809b2 621 Pfam PF02151 UvrB/uvrC motif 210 240 5.7E-7 T 11-10-2018 IPR001943 UVR domain GO:0005515 XFC3_03290 a0f9538b0b7e15018b22d7ddff3809b2 621 SMART SM00278 586 605 88.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XFC3_03290 a0f9538b0b7e15018b22d7ddff3809b2 621 SMART SM00278 554 573 7.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XFC3_03290 a0f9538b0b7e15018b22d7ddff3809b2 621 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 16 585 1.1E-176 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 XFC3_04240 676b87883b7b312a8d53ad372ea64abb 287 SUPERFAMILY SSF161098 25 273 3.27E-30 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_04240 676b87883b7b312a8d53ad372ea64abb 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 17 282 3.2E-89 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 XFC3_04240 676b87883b7b312a8d53ad372ea64abb 287 Gene3D G3DSA:1.10.3720.10 63 283 2.7E-24 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_04240 676b87883b7b312a8d53ad372ea64abb 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 276 1.1E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFC3_04225 43bea81d98ff06a0eca1cd5c31216f8b 210 Hamap MF_00157 Ribonuclease T [rnt]. 1 210 86.241 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 XFC3_04225 43bea81d98ff06a0eca1cd5c31216f8b 210 Gene3D G3DSA:3.30.420.10 12 208 7.7E-47 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFC3_04225 43bea81d98ff06a0eca1cd5c31216f8b 210 SMART SM00479 21 206 3.5E-19 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFC3_04225 43bea81d98ff06a0eca1cd5c31216f8b 210 TIGRFAM TIGR01298 RNaseT: ribonuclease T 13 209 1.0E-111 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 XFC3_04225 43bea81d98ff06a0eca1cd5c31216f8b 210 SUPERFAMILY SSF53098 11 204 5.22E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFC3_04225 43bea81d98ff06a0eca1cd5c31216f8b 210 Pfam PF00929 Exonuclease 23 197 5.1E-24 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFC3_05010 a184d8b5da8a3203eb7d22d9e8416a77 291 SUPERFAMILY SSF74653 173 286 1.07E-21 T 11-10-2018 XFC3_05010 a184d8b5da8a3203eb7d22d9e8416a77 291 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 206 282 8.4E-20 T 11-10-2018 IPR006260 TonB/TolA, C-terminal XFC3_05010 a184d8b5da8a3203eb7d22d9e8416a77 291 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 204 273 2.2E-17 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 XFC3_05010 a184d8b5da8a3203eb7d22d9e8416a77 291 Gene3D G3DSA:3.30.1150.10 125 281 3.1E-22 T 11-10-2018 XFC3_00210 c23bdbb13b4b54a3aa9b6c4fc121d063 728 Gene3D G3DSA:1.10.10.160 114 188 2.3E-92 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily XFC3_00210 c23bdbb13b4b54a3aa9b6c4fc121d063 728 Gene3D G3DSA:3.40.50.300 10 274 2.3E-92 T 11-10-2018 XFC3_00210 c23bdbb13b4b54a3aa9b6c4fc121d063 728 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 726 0.0 T 11-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 XFC3_00210 c23bdbb13b4b54a3aa9b6c4fc121d063 728 SUPERFAMILY SSF52540 7 648 3.47E-173 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_00210 c23bdbb13b4b54a3aa9b6c4fc121d063 728 Pfam PF13361 UvrD-like helicase C-terminal domain 278 622 2.5E-75 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XFC3_00210 c23bdbb13b4b54a3aa9b6c4fc121d063 728 Gene3D G3DSA:1.10.486.10 383 544 1.7E-121 T 11-10-2018 XFC3_00210 c23bdbb13b4b54a3aa9b6c4fc121d063 728 Gene3D G3DSA:3.40.50.300 282 642 1.7E-121 T 11-10-2018 XFC3_00210 c23bdbb13b4b54a3aa9b6c4fc121d063 728 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 1.7E-65 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 XFC3_12480 c6adcaf15d8e15e517239bbaa96e4501 102 Gene3D G3DSA:1.10.260.40 23 98 3.4E-5 T 11-10-2018 XFC3_12480 c6adcaf15d8e15e517239bbaa96e4501 102 SUPERFAMILY SSF47413 34 96 2.3E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_12480 c6adcaf15d8e15e517239bbaa96e4501 102 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 11 98 3.2E-37 T 11-10-2018 IPR014057 Uncharacterized protein HI1420 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 SUPERFAMILY SSF82866 298 493 3.53E-35 T 11-10-2018 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 4.9E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 4.9E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 4.9E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 4.9E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 4.9E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 SUPERFAMILY SSF82693 144 328 1.31E-15 T 11-10-2018 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 Gene3D G3DSA:3.30.70.1440 658 857 6.6E-231 T 11-10-2018 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 SUPERFAMILY SSF82866 793 1016 1.83E-41 T 11-10-2018 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 SUPERFAMILY SSF82714 190 271 7.72E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 Gene3D G3DSA:1.20.1640.10 18 506 6.6E-231 T 11-10-2018 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 Gene3D G3DSA:3.30.70.1430 45 805 6.6E-231 T 11-10-2018 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 SUPERFAMILY SSF82693 45 138 5.06E-14 T 11-10-2018 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 Gene3D G3DSA:3.30.2090.10 184 273 6.6E-231 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 Gene3D G3DSA:3.30.70.1320 142 331 6.6E-231 T 11-10-2018 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 Gene3D G3DSA:1.20.1640.10 507 1009 6.6E-231 T 11-10-2018 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 SUPERFAMILY SSF82693 557 606 8.11E-5 T 11-10-2018 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 Pfam PF00873 AcrB/AcrD/AcrF family 9 1010 1.2E-149 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 Gene3D G3DSA:3.30.2090.10 709 797 6.6E-231 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 Gene3D G3DSA:3.30.70.1430 558 657 6.6E-231 T 11-10-2018 XFC3_04490 5df070eb3f8e9b6bb64e0abe2c2e34ac 1020 SUPERFAMILY SSF82714 710 795 6.93E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_04095 063c3acbe812e1a077cb0329d55383ad 104 Pfam PF16083 LydA holin phage, holin superfamily III 15 90 1.9E-16 T 11-10-2018 IPR032126 LydA-like holin XFC3_05295 fe3142b722205612d1ee01f00640b87d 178 Gene3D G3DSA:3.30.1330.60 60 177 8.9E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily XFC3_05295 fe3142b722205612d1ee01f00640b87d 178 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 3 175 28.562 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 XFC3_05295 fe3142b722205612d1ee01f00640b87d 178 SUPERFAMILY SSF103088 56 174 1.57E-32 T 11-10-2018 IPR036737 OmpA-like domain superfamily XFC3_05295 fe3142b722205612d1ee01f00640b87d 178 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 73 175 1.9E-42 T 11-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 XFC3_05295 fe3142b722205612d1ee01f00640b87d 178 Pfam PF00691 OmpA family 74 169 1.3E-16 T 11-10-2018 IPR006665 OmpA-like domain XFC3_05295 fe3142b722205612d1ee01f00640b87d 178 PRINTS PR01021 OMPA domain signature 105 120 8.7E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFC3_05295 fe3142b722205612d1ee01f00640b87d 178 PRINTS PR01021 OMPA domain signature 75 97 8.7E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFC3_05295 fe3142b722205612d1ee01f00640b87d 178 PRINTS PR01021 OMPA domain signature 120 136 8.7E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFC3_06005 421367cca27a8a12a0cd3ffabdfbcd49 335 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 8 317 1.5E-124 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XFC3_06005 421367cca27a8a12a0cd3ffabdfbcd49 335 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 8 167 5.2E-68 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XFC3_06005 421367cca27a8a12a0cd3ffabdfbcd49 335 SUPERFAMILY SSF51735 6 173 5.86E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_06005 421367cca27a8a12a0cd3ffabdfbcd49 335 Gene3D G3DSA:3.40.50.720 3 172 5.1E-67 T 11-10-2018 XFC3_06005 421367cca27a8a12a0cd3ffabdfbcd49 335 SUPERFAMILY SSF48179 174 327 1.87E-68 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XFC3_06005 421367cca27a8a12a0cd3ffabdfbcd49 335 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 319 42.467 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XFC3_06005 421367cca27a8a12a0cd3ffabdfbcd49 335 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 174 317 3.7E-63 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XFC3_06005 421367cca27a8a12a0cd3ffabdfbcd49 335 PIRSF PIRSF000116 2 198 2.1E-40 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XFC3_06005 421367cca27a8a12a0cd3ffabdfbcd49 335 PIRSF PIRSF000116 192 323 5.2E-13 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XFC3_06005 421367cca27a8a12a0cd3ffabdfbcd49 335 Gene3D G3DSA:1.10.3730.40 173 328 2.7E-70 T 11-10-2018 XFC3_10415 0a06cb9cd50eabc68edfbf8021c19ac4 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XFC3_10415 0a06cb9cd50eabc68edfbf8021c19ac4 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 1.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_10415 0a06cb9cd50eabc68edfbf8021c19ac4 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 1.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_10415 0a06cb9cd50eabc68edfbf8021c19ac4 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 1.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_10415 0a06cb9cd50eabc68edfbf8021c19ac4 260 Gene3D G3DSA:3.40.50.720 1 258 1.3E-79 T 11-10-2018 XFC3_10415 0a06cb9cd50eabc68edfbf8021c19ac4 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_10415 0a06cb9cd50eabc68edfbf8021c19ac4 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_10415 0a06cb9cd50eabc68edfbf8021c19ac4 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_10415 0a06cb9cd50eabc68edfbf8021c19ac4 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 2.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_10415 0a06cb9cd50eabc68edfbf8021c19ac4 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 2.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_10415 0a06cb9cd50eabc68edfbf8021c19ac4 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 2.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_10415 0a06cb9cd50eabc68edfbf8021c19ac4 260 SUPERFAMILY SSF51735 11 257 9.56E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_10415 0a06cb9cd50eabc68edfbf8021c19ac4 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 255 3.3E-60 T 11-10-2018 XFC3_06955 0b3c4e92e93aa398c8c207a82f7d1bc6 339 Gene3D G3DSA:1.10.150.130 63 168 1.5E-5 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFC3_06955 0b3c4e92e93aa398c8c207a82f7d1bc6 339 Pfam PF00589 Phage integrase family 176 331 2.8E-17 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFC3_06955 0b3c4e92e93aa398c8c207a82f7d1bc6 339 Gene3D G3DSA:1.10.443.10 169 335 1.8E-29 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFC3_06955 0b3c4e92e93aa398c8c207a82f7d1bc6 339 SUPERFAMILY SSF56349 65 329 1.06E-46 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFC3_12330 645ced18c92dbbd7fb2f2125627fcfe3 405 PIRSF PIRSF028408 1 399 1.8E-137 T 11-10-2018 IPR014544 Uncharacterised conserved protein UCP028408 XFC3_12330 645ced18c92dbbd7fb2f2125627fcfe3 405 Pfam PF11795 Uncharacterized protein conserved in bacteria N-term (DUF3322) 6 188 5.6E-58 T 11-10-2018 IPR024537 Domain of unknown function DUF3322 XFC3_12330 645ced18c92dbbd7fb2f2125627fcfe3 405 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 211 389 1.8E-62 T 11-10-2018 IPR024534 Domain of unknown function DUF2220 XFC3_05685 d8acb8499ff41244712e39686bb6877c 93 Gene3D G3DSA:1.10.260.40 11 93 4.5E-25 T 11-10-2018 XFC3_05685 d8acb8499ff41244712e39686bb6877c 93 Pfam PF13744 Helix-turn-helix domain 14 89 1.6E-23 T 11-10-2018 IPR039554 HigA2-like, helix-turn-helix domain XFC3_05685 d8acb8499ff41244712e39686bb6877c 93 SUPERFAMILY SSF47413 19 89 1.33E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_06415 11240be6034a1cbe0f9a61666e05ca9a 338 Pfam PF01738 Dienelactone hydrolase family 65 169 4.9E-9 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 XFC3_06415 11240be6034a1cbe0f9a61666e05ca9a 338 SUPERFAMILY SSF53474 28 337 6.55E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_06415 11240be6034a1cbe0f9a61666e05ca9a 338 Gene3D G3DSA:1.10.10.800 176 266 6.4E-107 T 11-10-2018 XFC3_06415 11240be6034a1cbe0f9a61666e05ca9a 338 Gene3D G3DSA:3.40.50.1820 41 321 6.4E-107 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_06015 eac98691ed9e95f96692c83b0d3bde00 81 SUPERFAMILY SSF55021 1 75 1.49E-5 T 11-10-2018 XFC3_06015 eac98691ed9e95f96692c83b0d3bde00 81 Pfam PF13710 ACT domain 12 73 2.9E-20 T 11-10-2018 XFC3_08675 6655147af065cee56005bc0212fe34dd 164 PIRSF PIRSF001467 2 154 2.7E-54 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 XFC3_08675 6655147af065cee56005bc0212fe34dd 164 SUPERFAMILY SSF50891 4 136 1.13E-56 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily XFC3_08675 6655147af065cee56005bc0212fe34dd 164 Gene3D G3DSA:2.40.100.10 3 144 9.1E-60 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily XFC3_08675 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 1.2E-35 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XFC3_08675 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 98 1.2E-35 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XFC3_08675 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 111 126 1.2E-35 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XFC3_08675 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 56 1.2E-35 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XFC3_08675 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 110 1.2E-35 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XFC3_08675 6655147af065cee56005bc0212fe34dd 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 7 134 3.1E-49 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XFC3_08675 6655147af065cee56005bc0212fe34dd 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 39 56 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 XFC3_03235 a8e8655e611ea6dbaf3b64539ea5ecc8 442 SUPERFAMILY SSF55205 9 432 2.45E-123 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 XFC3_03235 a8e8655e611ea6dbaf3b64539ea5ecc8 442 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 15 434 31.578 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XFC3_03235 a8e8655e611ea6dbaf3b64539ea5ecc8 442 PIRSF PIRSF000505 8 438 1.8E-116 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XFC3_03235 a8e8655e611ea6dbaf3b64539ea5ecc8 442 Gene3D G3DSA:3.65.10.10 19 424 3.6E-146 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XFC3_03235 a8e8655e611ea6dbaf3b64539ea5ecc8 442 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 13 425 9.9E-113 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 XFC3_03235 a8e8655e611ea6dbaf3b64539ea5ecc8 442 ProSitePatterns PS00104 EPSP synthase signature 1. 94 108 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XFC3_03235 a8e8655e611ea6dbaf3b64539ea5ecc8 442 Gene3D G3DSA:3.65.10.10 27 236 3.6E-146 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XFC3_03235 a8e8655e611ea6dbaf3b64539ea5ecc8 442 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 19 429 3.7E-118 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XFC3_03235 a8e8655e611ea6dbaf3b64539ea5ecc8 442 ProSitePatterns PS00885 EPSP synthase signature 2. 346 364 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XFC3_01580 7baf71cfa1193c9d1c053097e4cca5e2 252 Pfam PF01569 PAP2 superfamily 109 235 2.9E-8 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XFC3_01580 7baf71cfa1193c9d1c053097e4cca5e2 252 SUPERFAMILY SSF48317 19 239 2.48E-14 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XFC3_05290 c743545acadabeacba14b14d1b970fed 439 Pfam PF07676 WD40-like Beta Propeller Repeat 286 319 5.5E-15 T 11-10-2018 IPR011659 WD40-like Beta Propeller XFC3_05290 c743545acadabeacba14b14d1b970fed 439 Pfam PF07676 WD40-like Beta Propeller Repeat 208 232 1.2E-6 T 11-10-2018 IPR011659 WD40-like Beta Propeller XFC3_05290 c743545acadabeacba14b14d1b970fed 439 Pfam PF07676 WD40-like Beta Propeller Repeat 243 276 9.8E-6 T 11-10-2018 IPR011659 WD40-like Beta Propeller XFC3_05290 c743545acadabeacba14b14d1b970fed 439 Gene3D G3DSA:3.40.50.10070 24 167 5.4E-40 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 XFC3_05290 c743545acadabeacba14b14d1b970fed 439 Gene3D G3DSA:2.120.10.30 168 439 8.5E-85 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XFC3_05290 c743545acadabeacba14b14d1b970fed 439 SUPERFAMILY SSF69304 159 434 9.55E-50 T 11-10-2018 XFC3_05290 c743545acadabeacba14b14d1b970fed 439 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 21 433 1.2E-157 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 XFC3_05290 c743545acadabeacba14b14d1b970fed 439 Pfam PF04052 TolB amino-terminal domain 27 132 1.3E-29 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 XFC3_05290 c743545acadabeacba14b14d1b970fed 439 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 8 432 47.367 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 XFC3_05290 c743545acadabeacba14b14d1b970fed 439 SUPERFAMILY SSF52964 33 164 7.72E-36 T 11-10-2018 XFC3_07240 e31bb49726a91f6b4a9291ef8370ff12 138 Gene3D G3DSA:3.30.160.510 62 129 1.0E-23 T 11-10-2018 XFC3_07240 e31bb49726a91f6b4a9291ef8370ff12 138 SUPERFAMILY SSF81273 87 116 1.73E-5 T 11-10-2018 XFC3_07240 e31bb49726a91f6b4a9291ef8370ff12 138 Pfam PF00816 H-NS histone family 18 116 9.0E-17 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 XFC3_07240 e31bb49726a91f6b4a9291ef8370ff12 138 SMART SM00528 83 126 3.2E-8 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 XFC3_07055 386e9ef8ff8e5b797bce7735a4a2dffc 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_07055 386e9ef8ff8e5b797bce7735a4a2dffc 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_07055 386e9ef8ff8e5b797bce7735a4a2dffc 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_07055 386e9ef8ff8e5b797bce7735a4a2dffc 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_07055 386e9ef8ff8e5b797bce7735a4a2dffc 311 Pfam PF03466 LysR substrate binding domain 87 293 2.5E-49 T 11-10-2018 IPR005119 LysR, substrate-binding XFC3_07055 386e9ef8ff8e5b797bce7735a4a2dffc 311 Gene3D G3DSA:3.40.190.10 161 263 1.0E-67 T 11-10-2018 XFC3_07055 386e9ef8ff8e5b797bce7735a4a2dffc 311 SUPERFAMILY SSF46785 1 110 3.24E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_07055 386e9ef8ff8e5b797bce7735a4a2dffc 311 Gene3D G3DSA:3.40.190.10 91 290 1.0E-67 T 11-10-2018 XFC3_07055 386e9ef8ff8e5b797bce7735a4a2dffc 311 Gene3D G3DSA:1.10.10.10 1 85 4.8E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_07055 386e9ef8ff8e5b797bce7735a4a2dffc 311 SUPERFAMILY SSF53850 88 296 4.5E-44 T 11-10-2018 XFC3_05810 c3c6b91d5837d851045f330d822d1fa3 170 Gene3D G3DSA:3.90.20.10 31 92 1.2E-5 T 11-10-2018 XFC3_05810 c3c6b91d5837d851045f330d822d1fa3 170 Pfam PF07798 Protein of unknown function (DUF1640) 6 166 1.8E-8 T 11-10-2018 IPR024461 Coiled-coil domain-containing protein 90-like XFC3_05810 c3c6b91d5837d851045f330d822d1fa3 170 Gene3D G3DSA:3.90.20.10 93 154 5.1E-9 T 11-10-2018 XFC3_05810 c3c6b91d5837d851045f330d822d1fa3 170 SUPERFAMILY SSF58113 29 133 8.89E-6 T 11-10-2018 XFC3_00075 e7aabb2a249361700b9250368f56490e 305 SUPERFAMILY SSF102886 5 297 2.22E-127 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFC3_00075 e7aabb2a249361700b9250368f56490e 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 274 58.192 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFC3_00075 e7aabb2a249361700b9250368f56490e 305 PRINTS PR00073 Coprogen oxidase signature 160 189 1.6E-81 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFC3_00075 e7aabb2a249361700b9250368f56490e 305 PRINTS PR00073 Coprogen oxidase signature 231 258 1.6E-81 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFC3_00075 e7aabb2a249361700b9250368f56490e 305 PRINTS PR00073 Coprogen oxidase signature 259 285 1.6E-81 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFC3_00075 e7aabb2a249361700b9250368f56490e 305 PRINTS PR00073 Coprogen oxidase signature 88 112 1.6E-81 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFC3_00075 e7aabb2a249361700b9250368f56490e 305 PRINTS PR00073 Coprogen oxidase signature 46 67 1.6E-81 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFC3_00075 e7aabb2a249361700b9250368f56490e 305 PRINTS PR00073 Coprogen oxidase signature 29 45 1.6E-81 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFC3_00075 e7aabb2a249361700b9250368f56490e 305 PRINTS PR00073 Coprogen oxidase signature 123 145 1.6E-81 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFC3_00075 e7aabb2a249361700b9250368f56490e 305 Gene3D G3DSA:3.40.1500.10 1 298 6.1E-126 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFC3_00075 e7aabb2a249361700b9250368f56490e 305 Pfam PF01218 Coproporphyrinogen III oxidase 6 298 1.0E-125 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFC3_00075 e7aabb2a249361700b9250368f56490e 305 PIRSF PIRSF000166 2 299 3.5E-119 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFC3_00075 e7aabb2a249361700b9250368f56490e 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFC3_08640 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 Gene3D G3DSA:3.40.50.300 2 238 5.4E-61 T 11-10-2018 XFC3_08640 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 Pfam PF00005 ABC transporter 27 171 1.6E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_08640 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 SMART SM00382 36 218 9.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_08640 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_08640 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 SUPERFAMILY SSF52540 6 238 3.59E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_03875 8bee44b37fa2920d8904d4255dce42b3 127 Pfam PF04591 Protein of unknown function, DUF596 56 118 3.2E-21 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFC3_03875 8bee44b37fa2920d8904d4255dce42b3 127 Gene3D G3DSA:1.10.3510.10 3 126 3.7E-13 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_03875 8bee44b37fa2920d8904d4255dce42b3 127 SUPERFAMILY SSF160472 1 119 7.32E-37 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_02765 67cd9000452b2cc2b03a39d5260fcde9 104 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 7.8E-42 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 XFC3_02765 67cd9000452b2cc2b03a39d5260fcde9 104 Pfam PF00216 Bacterial DNA-binding protein 1 90 5.4E-28 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_02765 67cd9000452b2cc2b03a39d5260fcde9 104 SUPERFAMILY SSF47729 1 91 3.39E-29 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFC3_02765 67cd9000452b2cc2b03a39d5260fcde9 104 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 XFC3_02765 67cd9000452b2cc2b03a39d5260fcde9 104 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.501 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 XFC3_02765 67cd9000452b2cc2b03a39d5260fcde9 104 Gene3D G3DSA:4.10.520.10 1 92 1.9E-31 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFC3_02765 67cd9000452b2cc2b03a39d5260fcde9 104 SMART SM00411 1 91 3.1E-39 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_02765 67cd9000452b2cc2b03a39d5260fcde9 104 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.0E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_02765 67cd9000452b2cc2b03a39d5260fcde9 104 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.0E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_02765 67cd9000452b2cc2b03a39d5260fcde9 104 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.0E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_00015 863dd12bdde465029251562484acf40d 364 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 364 79.606 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 XFC3_00015 863dd12bdde465029251562484acf40d 364 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 336 4.5E-17 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal XFC3_00015 863dd12bdde465029251562484acf40d 364 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 338 1.7E-76 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 XFC3_00015 863dd12bdde465029251562484acf40d 364 Gene3D G3DSA:1.20.1050.90 123 302 3.4E-73 T 11-10-2018 XFC3_00015 863dd12bdde465029251562484acf40d 364 Gene3D G3DSA:3.40.50.300 7 338 3.4E-73 T 11-10-2018 XFC3_00015 863dd12bdde465029251562484acf40d 364 ProSitePatterns PS00617 RecF protein signature 1. 120 140 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 XFC3_00015 863dd12bdde465029251562484acf40d 364 ProSitePatterns PS00618 RecF protein signature 2. 303 321 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 XFC3_00015 863dd12bdde465029251562484acf40d 364 SUPERFAMILY SSF52540 1 335 2.55E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_04985 9f0c09e5a56c5a867403873e0738c350 127 Pfam PF03692 Putative zinc- or iron-chelating domain 4 97 4.9E-14 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein XFC3_03510 8f9f0be07249c8f5ebf0ce4728556079 194 Pfam PF02659 Putative manganese efflux pump 32 186 2.6E-49 T 11-10-2018 IPR003810 Putative manganese efflux pump XFC3_03510 8f9f0be07249c8f5ebf0ce4728556079 194 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 189 24.58 T 11-10-2018 IPR022929 Putative manganese efflux pump MntP XFC3_03605 60f23dfbb8d8ab233317da2c2287740b 160 Gene3D G3DSA:2.60.40.790 11 147 1.1E-37 T 11-10-2018 IPR008978 HSP20-like chaperone XFC3_03605 60f23dfbb8d8ab233317da2c2287740b 160 SUPERFAMILY SSF49764 24 147 9.77E-38 T 11-10-2018 IPR008978 HSP20-like chaperone XFC3_03605 60f23dfbb8d8ab233317da2c2287740b 160 Pfam PF00011 Hsp20/alpha crystallin family 48 147 3.4E-24 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain XFC3_12055 6f78528a79def11c3e3905094ceec36c 198 Pfam PF01914 MarC family integral membrane protein 3 192 3.3E-49 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 XFC3_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 Gene3D G3DSA:1.10.630.10 1 400 2.3E-113 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 XFC3_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 Pfam PF00067 Cytochrome P450 79 368 6.0E-32 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 XFC3_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 SUPERFAMILY SSF48264 9 396 9.82E-89 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 XFC3_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 339 348 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 348 359 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 318 333 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 131 147 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 192 214 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 273 284 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 85 96 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 290 317 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 341 350 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 XFC3_11865 7a36eb46b27251d6afb146268af19d79 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 22 40 - T 11-10-2018 IPR019844 Cold-shock conserved site XFC3_11865 7a36eb46b27251d6afb146268af19d79 73 PIRSF PIRSF002599 4 73 1.8E-21 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 XFC3_11865 7a36eb46b27251d6afb146268af19d79 73 SMART SM00357 10 73 1.1E-25 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 XFC3_11865 7a36eb46b27251d6afb146268af19d79 73 Pfam PF00313 'Cold-shock' DNA-binding domain 11 72 2.0E-27 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFC3_11865 7a36eb46b27251d6afb146268af19d79 73 PRINTS PR00050 Cold shock protein signature 11 26 1.2E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFC3_11865 7a36eb46b27251d6afb146268af19d79 73 PRINTS PR00050 Cold shock protein signature 46 64 1.2E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFC3_11865 7a36eb46b27251d6afb146268af19d79 73 PRINTS PR00050 Cold shock protein signature 31 40 1.2E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFC3_11865 7a36eb46b27251d6afb146268af19d79 73 Gene3D G3DSA:2.40.50.140 8 72 1.0E-26 T 11-10-2018 XFC3_11865 7a36eb46b27251d6afb146268af19d79 73 SUPERFAMILY SSF50249 8 72 1.64E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_12135 2cb67605ee2f6526deadd25198417bd1 253 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 72 81 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XFC3_12135 2cb67605ee2f6526deadd25198417bd1 253 SUPERFAMILY SSF52141 17 236 3.05E-88 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XFC3_12135 2cb67605ee2f6526deadd25198417bd1 253 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 19 235 37.871 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XFC3_12135 2cb67605ee2f6526deadd25198417bd1 253 SMART SM00986 64 224 7.8E-36 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XFC3_12135 2cb67605ee2f6526deadd25198417bd1 253 Pfam PF03167 Uracil DNA glycosylase superfamily 69 223 3.5E-21 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XFC3_12135 2cb67605ee2f6526deadd25198417bd1 253 Gene3D G3DSA:3.40.470.10 2 242 4.4E-92 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XFC3_12135 2cb67605ee2f6526deadd25198417bd1 253 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 20 228 3.5E-78 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XFC3_12135 2cb67605ee2f6526deadd25198417bd1 253 SMART SM00987 64 224 7.8E-36 T 11-10-2018 XFC3_01185 2e060dc77a242d6d9fec3d73a08a39d4 219 Gene3D G3DSA:1.10.510.10 48 187 4.4E-7 T 11-10-2018 XFC3_01185 2e060dc77a242d6d9fec3d73a08a39d4 219 SUPERFAMILY SSF56112 31 149 1.9E-16 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily XFC3_01185 2e060dc77a242d6d9fec3d73a08a39d4 219 Pfam PF01636 Phosphotransferase enzyme family 100 155 2.8E-5 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Pfam PF02824 TGS domain 2 62 3.5E-9 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.30.54.20 131 188 3.9E-59 T 11-10-2018 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SUPERFAMILY SSF55681 244 527 1.57E-93 T 11-10-2018 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SUPERFAMILY SSF55186 65 242 9.16E-62 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.40.50.800 533 634 1.2E-32 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SMART SM00863 171 220 1.9E-20 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 2.0E-217 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 1.4E-14 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.30.930.10 224 532 3.0E-123 T 11-10-2018 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 7.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 7.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 7.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 7.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 7.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.30.980.10 70 223 3.9E-59 T 11-10-2018 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 530 1.6E-40 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.10.20.30 1 64 3.4E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 33.582 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Pfam PF03129 Anticodon binding domain 542 631 6.1E-22 T 11-10-2018 IPR004154 Anticodon-binding XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SUPERFAMILY SSF81271 2 62 8.17E-12 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XFC3_11200 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SUPERFAMILY SSF52954 530 632 1.31E-32 T 11-10-2018 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 Gene3D G3DSA:3.30.540.10 1 139 6.3E-46 T 11-10-2018 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 Gene3D G3DSA:3.40.190.80 140 267 4.1E-34 T 11-10-2018 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 SUPERFAMILY SSF56655 4 262 4.84E-78 T 11-10-2018 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 2.6E-17 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 2.6E-17 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 2.6E-17 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 2.6E-17 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 3.5E-55 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 3.5E-55 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 3.5E-55 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 3.5E-55 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 3.5E-55 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 3.5E-55 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 Pfam PF00459 Inositol monophosphatase family 4 251 4.5E-62 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site XFC3_02580 e43801e4a88f55af21378405e671ecfe 275 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 XFC3_10330 0bfced99ad6d1ab33a36cf4735c2fa53 617 Pfam PF07670 Nucleoside recognition 284 378 1.6E-11 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 XFC3_10330 0bfced99ad6d1ab33a36cf4735c2fa53 617 Pfam PF07670 Nucleoside recognition 453 586 1.4E-24 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 XFC3_10330 0bfced99ad6d1ab33a36cf4735c2fa53 617 Gene3D G3DSA:3.40.50.300 6 205 6.9E-43 T 11-10-2018 XFC3_10330 0bfced99ad6d1ab33a36cf4735c2fa53 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 29 47 2.4E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_10330 0bfced99ad6d1ab33a36cf4735c2fa53 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 8 28 2.4E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_10330 0bfced99ad6d1ab33a36cf4735c2fa53 617 SUPERFAMILY SSF52540 3 168 7.38E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_10330 0bfced99ad6d1ab33a36cf4735c2fa53 617 Pfam PF02421 Ferrous iron transport protein B 7 166 1.5E-53 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 XFC3_10330 0bfced99ad6d1ab33a36cf4735c2fa53 617 Pfam PF07664 Ferrous iron transport protein B C terminus 396 448 1.6E-15 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 XFC3_01755 3ef80fc46b4ecdbdb938e6a8a45c807d 249 Pfam PF02405 Permease MlaE 35 245 3.1E-65 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 XFC3_01755 3ef80fc46b4ecdbdb938e6a8a45c807d 249 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 6 249 4.7E-69 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria XFC3_01425 c0e93153fe4f89237838eb153d01dbfb 291 Pfam PF07282 Putative transposase DNA-binding domain 248 288 7.8E-9 T 11-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal XFC3_01425 c0e93153fe4f89237838eb153d01dbfb 291 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 205 273 6.1E-7 T 11-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal XFC3_01425 c0e93153fe4f89237838eb153d01dbfb 291 Pfam PF01385 Probable transposase 120 234 3.7E-24 T 11-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 XFC3_04870 42fd1ff630444d8d86c925a62dab4cba 344 PIRSF PIRSF028458 1 344 1.1E-187 T 11-10-2018 IPR016886 Predicted glycerophosphotransferase UCP028458 XFC3_04870 42fd1ff630444d8d86c925a62dab4cba 344 Gene3D G3DSA:3.40.50.12580 139 251 6.3E-6 T 11-10-2018 XFC3_04870 42fd1ff630444d8d86c925a62dab4cba 344 SUPERFAMILY SSF53756 13 310 7.53E-29 T 11-10-2018 XFC3_06865 7072e7b0ff98afbfb8afd39a45a512c7 396 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 11 175 9.4E-61 T 11-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 XFC3_06865 7072e7b0ff98afbfb8afd39a45a512c7 396 PIRSF PIRSF029215 1 396 1.6E-136 T 11-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 XFC3_08480 e120f34aa863af8e71421db3738fabf0 732 SMART SM00869 474 698 2.4E-8 T 11-10-2018 IPR005546 Autotransporter beta-domain XFC3_08480 e120f34aa863af8e71421db3738fabf0 732 Pfam PF03797 Autotransporter beta-domain 528 709 3.8E-14 T 11-10-2018 IPR005546 Autotransporter beta-domain XFC3_08480 e120f34aa863af8e71421db3738fabf0 732 SUPERFAMILY SSF103515 456 714 9.42E-25 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFC3_08480 e120f34aa863af8e71421db3738fabf0 732 Gene3D G3DSA:2.40.128.130 429 732 4.7E-16 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFC3_00880 bb2354af8e7a990bd2601b0f8334f2fc 223 PIRSF PIRSF001461 1 223 9.3E-101 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XFC3_00880 bb2354af8e7a990bd2601b0f8334f2fc 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 2.4E-96 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XFC3_00880 bb2354af8e7a990bd2601b0f8334f2fc 223 SUPERFAMILY SSF51366 1 216 6.73E-73 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XFC3_00880 bb2354af8e7a990bd2601b0f8334f2fc 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XFC3_00880 bb2354af8e7a990bd2601b0f8334f2fc 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 8.1E-88 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XFC3_00880 bb2354af8e7a990bd2601b0f8334f2fc 223 Gene3D G3DSA:3.20.20.70 4 222 4.0E-81 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_00880 bb2354af8e7a990bd2601b0f8334f2fc 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XFC3_03540 970f2e9ba4cfe6270506222acfa3ae78 298 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 61 76 8.2E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_03540 970f2e9ba4cfe6270506222acfa3ae78 298 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 8.2E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_03540 970f2e9ba4cfe6270506222acfa3ae78 298 Hamap MF_00367 GTPase Era [era]. 7 297 35.206 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_03540 970f2e9ba4cfe6270506222acfa3ae78 298 Gene3D G3DSA:3.40.50.300 6 185 5.9E-48 T 11-10-2018 XFC3_03540 970f2e9ba4cfe6270506222acfa3ae78 298 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 167 1.3E-29 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFC3_03540 970f2e9ba4cfe6270506222acfa3ae78 298 Pfam PF01926 50S ribosome-binding GTPase 11 126 1.7E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_03540 970f2e9ba4cfe6270506222acfa3ae78 298 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 280 3.6E-85 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_03540 970f2e9ba4cfe6270506222acfa3ae78 298 Pfam PF07650 KH domain 210 285 4.0E-20 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_03540 970f2e9ba4cfe6270506222acfa3ae78 298 SUPERFAMILY SSF52540 11 206 6.83E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_03540 970f2e9ba4cfe6270506222acfa3ae78 298 SUPERFAMILY SSF54814 183 298 3.14E-40 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XFC3_03540 970f2e9ba4cfe6270506222acfa3ae78 298 Gene3D G3DSA:3.30.300.20 187 298 3.9E-41 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta XFC3_07635 91a091bb6e16ebf3844c5909e465d57e 298 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 286 4.4E-127 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_07635 91a091bb6e16ebf3844c5909e465d57e 298 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 284 37.841 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_07635 91a091bb6e16ebf3844c5909e465d57e 298 SUPERFAMILY SSF52096 28 287 2.98E-84 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFC3_07635 91a091bb6e16ebf3844c5909e465d57e 298 Gene3D G3DSA:3.90.226.10 28 289 2.2E-83 T 11-10-2018 XFC3_07635 91a091bb6e16ebf3844c5909e465d57e 298 Pfam PF01039 Carboxyl transferase domain 126 243 5.9E-15 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 XFC3_07635 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 254 263 3.8E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_07635 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 132 146 3.8E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_07635 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 166 184 3.8E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_07635 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 203 220 3.8E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_07635 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 232 243 3.8E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_03030 e6efe687b509358ea7f473bc71dc1bba 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 50.854 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 XFC3_03030 e6efe687b509358ea7f473bc71dc1bba 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 XFC3_03030 e6efe687b509358ea7f473bc71dc1bba 357 Gene3D G3DSA:3.40.718.10 1 357 5.8E-145 T 11-10-2018 XFC3_03030 e6efe687b509358ea7f473bc71dc1bba 357 SUPERFAMILY SSF53659 1 357 1.28E-119 T 11-10-2018 XFC3_03030 e6efe687b509358ea7f473bc71dc1bba 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 8.8E-152 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 XFC3_03030 e6efe687b509358ea7f473bc71dc1bba 357 SMART SM01329 4 353 1.8E-197 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XFC3_03030 e6efe687b509358ea7f473bc71dc1bba 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 353 1.9E-130 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XFC3_02560 2aef52f457138ca48a71af8e0e4caf24 117 Pfam PF07238 PilZ domain 13 103 8.3E-7 T 11-10-2018 IPR009875 PilZ domain GO:0035438 XFC3_02560 2aef52f457138ca48a71af8e0e4caf24 117 Gene3D G3DSA:2.40.10.220 1 117 1.4E-42 T 11-10-2018 XFC3_10690 dbae30dca1dfa7dda66aa1a42497c071 225 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 23 219 1.4E-52 T 11-10-2018 XFC3_10690 dbae30dca1dfa7dda66aa1a42497c071 225 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 18 220 3.9E-57 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 XFC3_10690 dbae30dca1dfa7dda66aa1a42497c071 225 SUPERFAMILY SSF53335 19 219 2.41E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_10690 dbae30dca1dfa7dda66aa1a42497c071 225 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 17 225 34.219 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 XFC3_10690 dbae30dca1dfa7dda66aa1a42497c071 225 Gene3D G3DSA:3.40.50.150 9 223 8.2E-68 T 11-10-2018 XFC3_10690 dbae30dca1dfa7dda66aa1a42497c071 225 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 145 160 - T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 XFC3_10980 cb73c6ee2b142dcb69d839fc482cfdd2 244 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 30 244 28.137 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 XFC3_10980 cb73c6ee2b142dcb69d839fc482cfdd2 244 Pfam PF02390 Putative methyltransferase 70 239 3.7E-46 T 11-10-2018 XFC3_10980 cb73c6ee2b142dcb69d839fc482cfdd2 244 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 59 243 8.8E-42 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 XFC3_10980 cb73c6ee2b142dcb69d839fc482cfdd2 244 SUPERFAMILY SSF53335 21 241 1.95E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_10980 cb73c6ee2b142dcb69d839fc482cfdd2 244 Gene3D G3DSA:3.40.50.150 37 244 1.3E-57 T 11-10-2018 XFC3_05305 6d9702f2744150f910e71536b8a8170d 217 Gene3D G3DSA:3.20.20.70 7 211 2.5E-36 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_05305 6d9702f2744150f910e71536b8a8170d 217 SUPERFAMILY SSF102114 31 108 1.44E-15 T 11-10-2018 XFC3_05305 6d9702f2744150f910e71536b8a8170d 217 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 217 2.5E-110 T 11-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE XFC3_05305 6d9702f2744150f910e71536b8a8170d 217 PIRSF PIRSF000370 6 217 2.0E-66 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 XFC3_05305 6d9702f2744150f910e71536b8a8170d 217 Pfam PF13394 4Fe-4S single cluster domain 29 110 3.1E-10 T 11-10-2018 XFC3_05305 6d9702f2744150f910e71536b8a8170d 217 Pfam PF04055 Radical SAM superfamily 31 108 9.3E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XFC3_05305 6d9702f2744150f910e71536b8a8170d 217 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 8 214 36.532 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 XFC3_05525 628f2c9a84bd8aae0b721662b04522e6 533 SMART SM00245 318 506 1.7E-8 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XFC3_05525 628f2c9a84bd8aae0b721662b04522e6 533 Pfam PF14684 Tricorn protease C1 domain 44 102 8.0E-9 T 11-10-2018 IPR028204 Tricorn protease C1 domain XFC3_05525 628f2c9a84bd8aae0b721662b04522e6 533 Gene3D G3DSA:3.90.226.10 330 503 2.9E-30 T 11-10-2018 XFC3_05525 628f2c9a84bd8aae0b721662b04522e6 533 Pfam PF03572 Peptidase family S41 351 504 2.9E-20 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XFC3_05525 628f2c9a84bd8aae0b721662b04522e6 533 Gene3D G3DSA:2.30.42.10 127 166 1.6E-6 T 11-10-2018 XFC3_05525 628f2c9a84bd8aae0b721662b04522e6 533 Gene3D G3DSA:2.30.42.10 262 329 2.9E-30 T 11-10-2018 XFC3_05525 628f2c9a84bd8aae0b721662b04522e6 533 SUPERFAMILY SSF52096 269 524 7.79E-48 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFC3_05525 628f2c9a84bd8aae0b721662b04522e6 533 Gene3D G3DSA:3.30.750.44 467 481 2.9E-30 T 11-10-2018 XFC3_05525 628f2c9a84bd8aae0b721662b04522e6 533 Gene3D G3DSA:3.30.750.44 46 126 1.6E-6 T 11-10-2018 XFC3_00860 7e7a263587dd4c893ecae0acb37b547d 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 48.86 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_00860 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 3.0E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_00860 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 3.0E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_00860 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 3.0E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_00860 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 3.0E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_00860 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 3.0E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_00860 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 3.0E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_00860 7e7a263587dd4c893ecae0acb37b547d 319 Gene3D G3DSA:3.90.226.10 1 318 1.0E-112 T 11-10-2018 XFC3_00860 7e7a263587dd4c893ecae0acb37b547d 319 SUPERFAMILY SSF52096 5 316 5.17E-95 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFC3_00860 7e7a263587dd4c893ecae0acb37b547d 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 1.2E-60 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_00860 7e7a263587dd4c893ecae0acb37b547d 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 316 8.7E-148 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFC3_09630 bc81c765f0b94097cabd2ef8d9a9bb67 208 Gene3D G3DSA:3.40.50.150 12 195 2.7E-53 T 11-10-2018 XFC3_09630 bc81c765f0b94097cabd2ef8d9a9bb67 208 Pfam PF03602 Conserved hypothetical protein 95 17 192 1.5E-54 T 11-10-2018 XFC3_09630 bc81c765f0b94097cabd2ef8d9a9bb67 208 SUPERFAMILY SSF53335 17 192 1.78E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_09630 bc81c765f0b94097cabd2ef8d9a9bb67 208 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 14 192 3.4E-42 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 XFC3_09630 bc81c765f0b94097cabd2ef8d9a9bb67 208 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XFC3_09630 bc81c765f0b94097cabd2ef8d9a9bb67 208 PIRSF PIRSF004553 16 194 1.2E-42 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 XFC3_02775 e9508039b03a5815a0bf8a5a33bf4bae 392 Gene3D G3DSA:1.25.40.10 38 174 4.4E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_02775 e9508039b03a5815a0bf8a5a33bf4bae 392 SMART SM00028 219 252 76.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_02775 e9508039b03a5815a0bf8a5a33bf4bae 392 SMART SM00028 112 145 86.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_02775 e9508039b03a5815a0bf8a5a33bf4bae 392 SMART SM00028 40 73 37.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_02775 e9508039b03a5815a0bf8a5a33bf4bae 392 SMART SM00028 185 218 170.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_02775 e9508039b03a5815a0bf8a5a33bf4bae 392 SUPERFAMILY SSF81901 44 252 2.41E-17 T 11-10-2018 XFC3_02775 e9508039b03a5815a0bf8a5a33bf4bae 392 Gene3D G3DSA:1.25.40.10 175 333 7.6E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_02775 e9508039b03a5815a0bf8a5a33bf4bae 392 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 9 390 34.646 T 11-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 XFC3_02775 e9508039b03a5815a0bf8a5a33bf4bae 392 Pfam PF13432 Tetratricopeptide repeat 190 250 0.011 T 11-10-2018 XFC3_02775 e9508039b03a5815a0bf8a5a33bf4bae 392 Pfam PF13432 Tetratricopeptide repeat 116 171 0.004 T 11-10-2018 XFC3_09260 0566e881149ee7b07c4fb99efe851187 82 SUPERFAMILY SSF109910 3 79 5.36E-21 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily XFC3_09260 0566e881149ee7b07c4fb99efe851187 82 Gene3D G3DSA:1.10.150.250 1 81 8.2E-25 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily XFC3_09260 0566e881149ee7b07c4fb99efe851187 82 Pfam PF03937 Flavinator of succinate dehydrogenase 8 75 1.4E-20 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase XFC3_00315 81b144d0f20c2f337b954b0517b6efa5 265 Pfam PF01063 Amino-transferase class IV 25 238 1.0E-33 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 XFC3_00315 81b144d0f20c2f337b954b0517b6efa5 265 SUPERFAMILY SSF56752 11 246 5.62E-37 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 XFC3_00315 81b144d0f20c2f337b954b0517b6efa5 265 Gene3D G3DSA:3.20.10.10 116 262 4.4E-20 T 11-10-2018 XFC3_00315 81b144d0f20c2f337b954b0517b6efa5 265 Gene3D G3DSA:3.30.470.10 7 112 8.9E-7 T 11-10-2018 XFC3_02215 ed8572ae149ad1405ea68ce357becd7c 267 Pfam PF10670 Domain of unknown function (DUF4198) 18 242 3.0E-64 T 11-10-2018 IPR019613 Protein of unknown function DUF4198 XFC3_02065 1c3b9da9e80134c1de638f2dfc827c97 151 SUPERFAMILY SSF49503 24 147 1.69E-41 T 11-10-2018 IPR008972 Cupredoxin XFC3_02065 1c3b9da9e80134c1de638f2dfc827c97 151 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 150 5.0E-69 T 11-10-2018 XFC3_02065 1c3b9da9e80134c1de638f2dfc827c97 151 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 24 148 8.9E-21 T 11-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 XFC3_02065 1c3b9da9e80134c1de638f2dfc827c97 151 TIGRFAM TIGR02695 azurin: azurin 25 148 4.4E-56 T 11-10-2018 IPR014068 Azurin XFC3_02065 1c3b9da9e80134c1de638f2dfc827c97 151 Gene3D G3DSA:2.60.40.420 23 149 7.3E-42 T 11-10-2018 IPR008972 Cupredoxin XFC3_00260 0184d15b9bcfc91ee644a4cedcffd335 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 77 99 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site XFC3_00260 0184d15b9bcfc91ee644a4cedcffd335 299 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 20 297 7.8E-116 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 XFC3_00260 0184d15b9bcfc91ee644a4cedcffd335 299 Gene3D G3DSA:1.20.120.1780 180 299 5.5E-8 T 11-10-2018 XFC3_00260 0184d15b9bcfc91ee644a4cedcffd335 299 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 15 298 28.633 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 XFC3_00260 0184d15b9bcfc91ee644a4cedcffd335 299 Gene3D G3DSA:1.10.357.140 35 179 8.0E-39 T 11-10-2018 XFC3_00260 0184d15b9bcfc91ee644a4cedcffd335 299 Pfam PF01040 UbiA prenyltransferase family 38 280 2.2E-58 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 XFC3_02160 0d0feb871c0525c494c310c9a9c5b839 227 Pfam PF11306 Protein of unknown function (DUF3108) 22 221 6.3E-14 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 XFC3_03425 95bdfa20df0bc24bab7d46925c21a034 323 Gene3D G3DSA:3.90.25.10 178 312 3.2E-94 T 11-10-2018 XFC3_03425 95bdfa20df0bc24bab7d46925c21a034 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 246 4.4E-60 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 XFC3_03425 95bdfa20df0bc24bab7d46925c21a034 323 Gene3D G3DSA:3.40.50.720 4 300 3.2E-94 T 11-10-2018 XFC3_03425 95bdfa20df0bc24bab7d46925c21a034 323 PRINTS PR01713 Nucleotide sugar epimerase signature 214 229 2.6E-23 T 11-10-2018 XFC3_03425 95bdfa20df0bc24bab7d46925c21a034 323 PRINTS PR01713 Nucleotide sugar epimerase signature 240 255 2.6E-23 T 11-10-2018 XFC3_03425 95bdfa20df0bc24bab7d46925c21a034 323 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 2.6E-23 T 11-10-2018 XFC3_03425 95bdfa20df0bc24bab7d46925c21a034 323 PRINTS PR01713 Nucleotide sugar epimerase signature 279 296 2.6E-23 T 11-10-2018 XFC3_03425 95bdfa20df0bc24bab7d46925c21a034 323 SUPERFAMILY SSF51735 1 317 9.75E-91 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_10785 c359778e8832b4abd41c66c8c68c13b0 402 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 6 389 2.9E-125 T 11-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 XFC3_10785 c359778e8832b4abd41c66c8c68c13b0 402 Pfam PF01494 FAD binding domain 6 347 2.1E-33 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 XFC3_10785 c359778e8832b4abd41c66c8c68c13b0 402 Gene3D G3DSA:3.50.50.60 6 337 3.1E-82 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_10785 c359778e8832b4abd41c66c8c68c13b0 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 389 1.7E-104 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 XFC3_10785 c359778e8832b4abd41c66c8c68c13b0 402 Gene3D G3DSA:3.30.9.50 78 271 3.1E-82 T 11-10-2018 XFC3_10785 c359778e8832b4abd41c66c8c68c13b0 402 SUPERFAMILY SSF51905 6 378 9.15E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_10785 c359778e8832b4abd41c66c8c68c13b0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 4.2E-20 T 11-10-2018 XFC3_10785 c359778e8832b4abd41c66c8c68c13b0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.2E-20 T 11-10-2018 XFC3_10785 c359778e8832b4abd41c66c8c68c13b0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 4.2E-20 T 11-10-2018 XFC3_10785 c359778e8832b4abd41c66c8c68c13b0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 4.2E-20 T 11-10-2018 XFC3_06020 be53aa577fe005fa8566f27b82dcda84 350 SUPERFAMILY SSF53686 23 315 1.14E-78 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XFC3_06020 be53aa577fe005fa8566f27b82dcda84 350 Gene3D G3DSA:3.40.50.1100 27 313 4.0E-88 T 11-10-2018 XFC3_06020 be53aa577fe005fa8566f27b82dcda84 350 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 39 300 8.8E-70 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XFC3_06020 be53aa577fe005fa8566f27b82dcda84 350 Gene3D G3DSA:3.40.50.1100 64 160 4.0E-88 T 11-10-2018 XFC3_04210 e7d974607f578dc6e4d90cb7aa564940 292 Pfam PF00149 Calcineurin-like phosphoesterase 1 142 8.9E-14 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 XFC3_04210 e7d974607f578dc6e4d90cb7aa564940 292 Gene3D G3DSA:3.60.21.10 1 270 5.7E-67 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like XFC3_04210 e7d974607f578dc6e4d90cb7aa564940 292 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 43.343 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 XFC3_04210 e7d974607f578dc6e4d90cb7aa564940 292 SUPERFAMILY SSF56300 1 272 1.98E-48 T 11-10-2018 XFC3_04210 e7d974607f578dc6e4d90cb7aa564940 292 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 259 2.4E-78 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 XFC3_04210 e7d974607f578dc6e4d90cb7aa564940 292 PIRSF PIRSF000903 1 275 6.0E-114 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 XFC3_00655 9fbca8908e1af78a82632d5c5f955717 271 SMART SM00645 37 267 0.0013 T 11-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 XFC3_00655 9fbca8908e1af78a82632d5c5f955717 271 Pfam PF00112 Papain family cysteine protease 48 254 1.5E-13 T 11-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 XFC3_00655 9fbca8908e1af78a82632d5c5f955717 271 Gene3D G3DSA:3.90.70.10 4 271 7.2E-129 T 11-10-2018 XFC3_00655 9fbca8908e1af78a82632d5c5f955717 271 SUPERFAMILY SSF54001 30 256 1.97E-38 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XFC3_07290 3ba86fd3b11d1fff1ad5092fe87f98cd 92 SMART SM00990 5 85 8.8E-18 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFC3_07290 3ba86fd3b11d1fff1ad5092fe87f98cd 92 Gene3D G3DSA:3.40.1350.10 5 92 1.2E-29 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XFC3_07290 3ba86fd3b11d1fff1ad5092fe87f98cd 92 Pfam PF08774 VRR-NUC domain 31 82 1.8E-6 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFC3_11460 3ba86fd3b11d1fff1ad5092fe87f98cd 92 SMART SM00990 5 85 8.8E-18 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFC3_11460 3ba86fd3b11d1fff1ad5092fe87f98cd 92 Gene3D G3DSA:3.40.1350.10 5 92 1.2E-29 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XFC3_11460 3ba86fd3b11d1fff1ad5092fe87f98cd 92 Pfam PF08774 VRR-NUC domain 31 82 1.8E-6 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFC3_09270 d30d6e8ef17634ae9c92dec25e743170 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 46 55 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09270 d30d6e8ef17634ae9c92dec25e743170 596 Gene3D G3DSA:3.90.700.10 250 353 2.3E-167 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09270 d30d6e8ef17634ae9c92dec25e743170 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 596 1.5E-43 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09270 d30d6e8ef17634ae9c92dec25e743170 596 Gene3D G3DSA:4.10.80.40 548 596 1.5E-10 T 11-10-2018 XFC3_09270 d30d6e8ef17634ae9c92dec25e743170 596 SUPERFAMILY SSF56425 240 358 3.59E-43 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09270 d30d6e8ef17634ae9c92dec25e743170 596 SUPERFAMILY SSF46977 454 596 2.75E-50 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09270 d30d6e8ef17634ae9c92dec25e743170 596 PIRSF PIRSF000171 1 585 4.4E-38 T 11-10-2018 XFC3_09270 d30d6e8ef17634ae9c92dec25e743170 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 12 596 2.7E-241 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09270 d30d6e8ef17634ae9c92dec25e743170 596 Gene3D G3DSA:3.50.50.60 12 419 2.3E-167 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_09270 d30d6e8ef17634ae9c92dec25e743170 596 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 9 596 4.8E-287 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09270 d30d6e8ef17634ae9c92dec25e743170 596 SUPERFAMILY SSF51905 4 440 4.99E-77 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_09270 d30d6e8ef17634ae9c92dec25e743170 596 Gene3D G3DSA:1.20.58.100 437 547 3.3E-37 T 11-10-2018 XFC3_09270 d30d6e8ef17634ae9c92dec25e743170 596 Pfam PF00890 FAD binding domain 12 408 9.4E-122 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_08860 b1da1399302f9ec94ae3784ddc8ce0e7 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08860 b1da1399302f9ec94ae3784ddc8ce0e7 118 PIRSF PIRSF002134 1 118 4.7E-40 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08860 b1da1399302f9ec94ae3784ddc8ce0e7 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 8.3E-49 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08860 b1da1399302f9ec94ae3784ddc8ce0e7 118 Pfam PF00416 Ribosomal protein S13/S18 62 108 1.8E-17 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08860 b1da1399302f9ec94ae3784ddc8ce0e7 118 Gene3D G3DSA:4.10.910.10 72 118 2.6E-25 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08860 b1da1399302f9ec94ae3784ddc8ce0e7 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.852 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08860 b1da1399302f9ec94ae3784ddc8ce0e7 118 Gene3D G3DSA:1.10.8.50 1 71 4.8E-25 T 11-10-2018 XFC3_08860 b1da1399302f9ec94ae3784ddc8ce0e7 118 SUPERFAMILY SSF46946 2 114 7.06E-42 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 XFC3_09735 abe9c3eaef9c5121717a31b50010c816 135 ProDom PD097046 DNA STABILIZATION GP4 PACKAGED LATE HEAD GENE SEQUENCING DIRECT COMPLETION 39 126 5.0E-4 T 11-10-2018 IPR020362 Tail accessory factor GP4 XFC3_09735 abe9c3eaef9c5121717a31b50010c816 135 Pfam PF11650 P22 tail accessory factor 22 114 6.2E-4 T 11-10-2018 IPR020362 Tail accessory factor GP4 XFC3_09735 abe9c3eaef9c5121717a31b50010c816 135 Gene3D G3DSA:1.10.3230.20 1 131 2.6E-10 T 11-10-2018 IPR038258 Peptidoglycan hydrolase Gp4 superfamily XFC3_01365 bd688a123249826254390920bed4e7bc 222 Gene3D G3DSA:1.20.120.1200 5 170 1.5E-40 T 11-10-2018 XFC3_01365 bd688a123249826254390920bed4e7bc 222 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 22 168 1.4E-35 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01375 7f8d087290d61c0802debe0d628ada07 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 88 113 2.0E-45 T 11-10-2018 XFC3_01375 7f8d087290d61c0802debe0d628ada07 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 253 274 2.0E-45 T 11-10-2018 XFC3_01375 7f8d087290d61c0802debe0d628ada07 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 452 471 2.0E-45 T 11-10-2018 XFC3_01375 7f8d087290d61c0802debe0d628ada07 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 275 301 2.0E-45 T 11-10-2018 XFC3_01375 7f8d087290d61c0802debe0d628ada07 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 343 355 2.0E-45 T 11-10-2018 XFC3_01375 7f8d087290d61c0802debe0d628ada07 713 Pfam PF00361 Proton-conducting membrane transporter 139 434 7.9E-86 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01375 7f8d087290d61c0802debe0d628ada07 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 511 532 1.7E-10 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XFC3_01375 7f8d087290d61c0802debe0d628ada07 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 386 408 1.7E-10 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XFC3_01375 7f8d087290d61c0802debe0d628ada07 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 90 110 1.7E-10 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XFC3_01375 7f8d087290d61c0802debe0d628ada07 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 64 88 1.7E-10 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XFC3_01375 7f8d087290d61c0802debe0d628ada07 713 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 708 1.1E-230 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01375 7f8d087290d61c0802debe0d628ada07 713 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 127 4.7E-25 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_09535 d66d2e08ea9d56f84669f4538c87fe29 333 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 124 7.8E-28 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XFC3_09535 d66d2e08ea9d56f84669f4538c87fe29 333 Gene3D G3DSA:3.30.360.10 134 290 2.1E-86 T 11-10-2018 XFC3_09535 d66d2e08ea9d56f84669f4538c87fe29 333 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 131 147 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XFC3_09535 d66d2e08ea9d56f84669f4538c87fe29 333 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 7 321 9.8E-97 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XFC3_09535 d66d2e08ea9d56f84669f4538c87fe29 333 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 6 316 31.926 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XFC3_09535 d66d2e08ea9d56f84669f4538c87fe29 333 SMART SM00859 7 128 1.5E-29 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XFC3_09535 d66d2e08ea9d56f84669f4538c87fe29 333 Gene3D G3DSA:3.40.50.720 8 308 2.1E-86 T 11-10-2018 XFC3_09535 d66d2e08ea9d56f84669f4538c87fe29 333 SUPERFAMILY SSF55347 136 290 8.72E-33 T 11-10-2018 XFC3_09535 d66d2e08ea9d56f84669f4538c87fe29 333 SUPERFAMILY SSF51735 6 151 1.03E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_04865 4b867b2d45c4eeba0ec22fb05161e9f3 291 Gene3D G3DSA:3.90.550.10 3 183 8.6E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_04865 4b867b2d45c4eeba0ec22fb05161e9f3 291 SUPERFAMILY SSF53448 20 164 3.94E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_04865 4b867b2d45c4eeba0ec22fb05161e9f3 291 Pfam PF00535 Glycosyl transferase family 2 21 103 1.9E-14 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XFC3_00815 524e00660c1453e210790658f4420798 244 Pfam PF04452 RNA methyltransferase 21 239 7.0E-72 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 XFC3_00815 524e00660c1453e210790658f4420798 244 Gene3D G3DSA:3.40.1280.10 74 244 5.4E-58 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XFC3_00815 524e00660c1453e210790658f4420798 244 SUPERFAMILY SSF75217 74 244 1.99E-51 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases XFC3_00815 524e00660c1453e210790658f4420798 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 244 1.5E-53 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 XFC3_00815 524e00660c1453e210790658f4420798 244 Gene3D G3DSA:2.40.240.20 1 68 9.5E-16 T 11-10-2018 XFC3_00815 524e00660c1453e210790658f4420798 244 SUPERFAMILY SSF88697 3 69 3.73E-14 T 11-10-2018 IPR015947 PUA-like superfamily XFC3_00815 524e00660c1453e210790658f4420798 244 PIRSF PIRSF015601 5 244 1.0E-55 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 XFC3_05245 e6caa10c01862e987ea9db4b4f23776f 244 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 6 236 1.2E-87 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_05245 e6caa10c01862e987ea9db4b4f23776f 244 Pfam PF01709 Transcriptional regulator 7 236 3.0E-85 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_05245 e6caa10c01862e987ea9db4b4f23776f 244 SUPERFAMILY SSF75625 7 237 4.45E-83 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_05245 e6caa10c01862e987ea9db4b4f23776f 244 Gene3D G3DSA:3.30.70.980 127 204 3.3E-50 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_05245 e6caa10c01862e987ea9db4b4f23776f 244 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 2 238 31.998 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_05245 e6caa10c01862e987ea9db4b4f23776f 244 Gene3D G3DSA:1.10.10.200 15 78 4.1E-26 T 11-10-2018 IPR017856 Integrase-like, N-terminal XFC3_05245 e6caa10c01862e987ea9db4b4f23776f 244 Gene3D G3DSA:3.30.70.980 82 235 3.3E-50 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_03755 e7d0a9855e7f778cc555f9ed259c1e35 306 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 304 29.192 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 XFC3_03755 e7d0a9855e7f778cc555f9ed259c1e35 306 Gene3D G3DSA:3.40.50.150 106 305 1.5E-45 T 11-10-2018 XFC3_03755 e7d0a9855e7f778cc555f9ed259c1e35 306 PIRSF PIRSF000401 1 306 1.5E-75 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 XFC3_03755 e7d0a9855e7f778cc555f9ed259c1e35 306 SUPERFAMILY SSF53335 83 282 6.6E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_03755 e7d0a9855e7f778cc555f9ed259c1e35 306 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 304 9.5E-89 T 11-10-2018 XFC3_03755 e7d0a9855e7f778cc555f9ed259c1e35 306 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 4 297 3.3E-61 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 XFC3_02115 44de27d1abf7b7486d4ba463d45d528c 302 Pfam PF04381 Putative exonuclease, RdgC 1 289 3.5E-95 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 XFC3_02115 44de27d1abf7b7486d4ba463d45d528c 302 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 300 41.54 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 XFC3_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 Pfam PF00294 pfkB family carbohydrate kinase 1 310 9.2E-46 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB XFC3_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 Gene3D G3DSA:3.40.1190.20 1 315 4.1E-73 T 11-10-2018 IPR029056 Ribokinase-like XFC3_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 PRINTS PR00990 Ribokinase signature 224 235 1.2E-18 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XFC3_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 PRINTS PR00990 Ribokinase signature 171 186 1.2E-18 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XFC3_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 PRINTS PR00990 Ribokinase signature 102 115 1.2E-18 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XFC3_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 PRINTS PR00990 Ribokinase signature 6 27 1.2E-18 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XFC3_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 Hamap MF_01987 Ribokinase [rbsK]. 2 317 20.513 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 XFC3_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 SUPERFAMILY SSF53613 1 311 1.14E-56 T 11-10-2018 IPR029056 Ribokinase-like XFC3_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 261 274 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XFC3_01720 a67752826a01363b3ab6a3b9f9978644 433 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_01720 a67752826a01363b3ab6a3b9f9978644 433 Pfam PF00005 ABC transporter 33 168 3.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_01720 a67752826a01363b3ab6a3b9f9978644 433 SUPERFAMILY SSF52540 12 243 2.9E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01720 a67752826a01363b3ab6a3b9f9978644 433 Pfam PF09821 C-terminal AAA-associated domain 304 421 8.7E-42 T 11-10-2018 IPR018632 C-terminal AAA-associated domain XFC3_01720 a67752826a01363b3ab6a3b9f9978644 433 SMART SM00382 42 220 7.9E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_01720 a67752826a01363b3ab6a3b9f9978644 433 Gene3D G3DSA:3.40.50.300 10 245 2.5E-57 T 11-10-2018 XFC3_02205 6473cd921007656a3b0b1497d01f5409 109 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 25 86 5.8E-25 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain XFC3_02205 6473cd921007656a3b0b1497d01f5409 109 SUPERFAMILY SSF47781 24 89 2.33E-25 T 11-10-2018 IPR010994 RuvA domain 2-like XFC3_02205 6473cd921007656a3b0b1497d01f5409 109 Pfam PF12836 Helix-hairpin-helix motif 23 86 5.8E-23 T 11-10-2018 XFC3_02205 6473cd921007656a3b0b1497d01f5409 109 Gene3D G3DSA:1.10.150.280 18 91 1.3E-20 T 11-10-2018 XFC3_01700 d836050acbd8d9f36adc152b08297681 319 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 312 2.0E-118 T 11-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 XFC3_01700 d836050acbd8d9f36adc152b08297681 319 Pfam PF03741 Integral membrane protein TerC family 80 282 1.7E-54 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 XFC3_09475 02f1fa5d85759294ddace232a928f671 452 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 24 443 37.805 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFC3_09475 02f1fa5d85759294ddace232a928f671 452 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 39 411 3.1E-112 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFC3_09475 02f1fa5d85759294ddace232a928f671 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 223 246 2.6E-58 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFC3_09475 02f1fa5d85759294ddace232a928f671 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 355 372 2.6E-58 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFC3_09475 02f1fa5d85759294ddace232a928f671 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 387 406 2.6E-58 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFC3_09475 02f1fa5d85759294ddace232a928f671 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 171 192 2.6E-58 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFC3_09475 02f1fa5d85759294ddace232a928f671 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 327 346 2.6E-58 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFC3_09475 02f1fa5d85759294ddace232a928f671 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 118 144 2.6E-58 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFC3_09475 02f1fa5d85759294ddace232a928f671 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 146 165 2.6E-58 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFC3_09475 02f1fa5d85759294ddace232a928f671 452 Pfam PF01566 Natural resistance-associated macrophage protein 59 415 2.9E-125 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFC3_03735 275373838e51b8ceabdedb89b7a78fb1 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 328 5.7E-35 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 XFC3_03735 275373838e51b8ceabdedb89b7a78fb1 413 SUPERFAMILY SSF51735 110 297 8.2E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_03735 275373838e51b8ceabdedb89b7a78fb1 413 SUPERFAMILY SSF52283 10 137 6.59E-44 T 11-10-2018 XFC3_03735 275373838e51b8ceabdedb89b7a78fb1 413 Gene3D G3DSA:3.40.50.720 16 314 3.9E-104 T 11-10-2018 XFC3_03735 275373838e51b8ceabdedb89b7a78fb1 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 296 2.9E-51 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 XFC3_03735 275373838e51b8ceabdedb89b7a78fb1 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 156 183 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XFC3_03735 275373838e51b8ceabdedb89b7a78fb1 413 Gene3D G3DSA:3.30.70.260 330 412 5.7E-28 T 11-10-2018 XFC3_03735 275373838e51b8ceabdedb89b7a78fb1 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 202 224 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site XFC3_03735 275373838e51b8ceabdedb89b7a78fb1 413 SUPERFAMILY SSF55021 335 412 8.4E-15 T 11-10-2018 XFC3_03735 275373838e51b8ceabdedb89b7a78fb1 413 Gene3D G3DSA:3.40.50.720 111 299 3.9E-104 T 11-10-2018 XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 10 126 8.7E-35 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 267 275 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 Gene3D G3DSA:3.40.50.10860 13 283 9.6E-100 T 11-10-2018 XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 SUPERFAMILY SSF51735 128 287 2.36E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 Gene3D G3DSA:3.40.50.720 11 266 9.6E-100 T 11-10-2018 XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 129 288 3.5E-64 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 263 281 1.1E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 80 107 1.1E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 211 240 1.1E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 246 262 1.1E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 160 180 1.1E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 115 136 1.1E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 39 61 1.1E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 SUPERFAMILY SSF53223 8 127 1.63E-36 T 11-10-2018 XFC3_02795 8c1c8e99aa85e3d26d467c24b460b818 291 Hamap MF_01576 Bifunctional protein FolD [folD]. 8 290 36.736 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFC3_02555 68db31944403343c1d1d190135539f56 319 Pfam PF13177 DNA polymerase III, delta subunit 9 170 2.1E-33 T 11-10-2018 XFC3_02555 68db31944403343c1d1d190135539f56 319 SUPERFAMILY SSF52540 7 208 1.26E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02555 68db31944403343c1d1d190135539f56 319 Gene3D G3DSA:3.40.50.300 4 171 1.0E-41 T 11-10-2018 XFC3_08225 6ae5c1788f08a2957497d0e603f7179e 226 Gene3D G3DSA:1.10.1670.40 16 207 4.7E-55 T 11-10-2018 XFC3_08225 6ae5c1788f08a2957497d0e603f7179e 226 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 52 196 1.2E-16 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XFC3_08225 6ae5c1788f08a2957497d0e603f7179e 226 Gene3D G3DSA:1.10.340.30 43 157 4.7E-55 T 11-10-2018 XFC3_08225 6ae5c1788f08a2957497d0e603f7179e 226 SMART SM00478 55 210 5.0E-10 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XFC3_08225 6ae5c1788f08a2957497d0e603f7179e 226 SUPERFAMILY SSF48150 40 208 2.62E-36 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 XFC3_08760 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 SUPERFAMILY SSF109998 70 311 8.63E-15 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily XFC3_08760 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 Pfam PF13616 PPIC-type PPIASE domain 279 387 5.0E-28 T 11-10-2018 XFC3_08760 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 Pfam PF13623 SurA N-terminal domain 2 157 1.1E-19 T 11-10-2018 XFC3_08760 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 Gene3D G3DSA:3.10.50.40 278 410 9.4E-35 T 11-10-2018 XFC3_08760 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 325 346 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 XFC3_08760 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 SUPERFAMILY SSF54534 284 388 1.11E-29 T 11-10-2018 XFC3_11070 b132452141dc5303432040f084ce6c71 431 Gene3D G3DSA:3.60.15.10 143 426 1.0E-103 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFC3_11070 b132452141dc5303432040f084ce6c71 431 SMART SM00849 156 345 4.9E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFC3_11070 b132452141dc5303432040f084ce6c71 431 Pfam PF04273 Putative phosphatase (DUF442) 3 111 7.8E-50 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 XFC3_11070 b132452141dc5303432040f084ce6c71 431 SUPERFAMILY SSF56281 151 426 1.16E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFC3_11070 b132452141dc5303432040f084ce6c71 431 Gene3D G3DSA:3.90.190.10 1 142 5.5E-37 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like XFC3_11070 b132452141dc5303432040f084ce6c71 431 SUPERFAMILY SSF52799 5 98 2.02E-8 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like XFC3_11070 b132452141dc5303432040f084ce6c71 431 Pfam PF00753 Metallo-beta-lactamase superfamily 158 345 1.1E-23 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFC3_11070 b132452141dc5303432040f084ce6c71 431 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 4 132 3.0E-28 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 XFC3_07025 fc0ad968df5f009c83f1fa03ef114152 217 Gene3D G3DSA:1.20.1260.10 62 199 1.6E-5 T 11-10-2018 IPR012347 Ferritin-like XFC3_07025 fc0ad968df5f009c83f1fa03ef114152 217 SUPERFAMILY SSF47240 55 190 5.42E-17 T 11-10-2018 IPR009078 Ferritin-like superfamily XFC3_07025 fc0ad968df5f009c83f1fa03ef114152 217 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 17 217 29.036 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 XFC3_07025 fc0ad968df5f009c83f1fa03ef114152 217 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 57 214 6.7E-37 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 SUPERFAMILY SSF50447 269 356 9.15E-22 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 Gene3D G3DSA:2.40.30.10 356 459 4.8E-33 T 11-10-2018 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 476 654 2.4E-71 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 Gene3D G3DSA:2.40.30.10 268 354 5.0E-23 T 11-10-2018 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 487 659 36.542 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 109 124 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 PRINTS PR00315 GTP-binding elongation factor signature 55 68 1.0E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 PRINTS PR00315 GTP-binding elongation factor signature 152 163 1.0E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 PRINTS PR00315 GTP-binding elongation factor signature 116 124 1.0E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 PRINTS PR00315 GTP-binding elongation factor signature 136 146 1.0E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 PRINTS PR00315 GTP-binding elongation factor signature 189 198 1.0E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 SUPERFAMILY SSF52540 485 655 1.38E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 SUPERFAMILY SSF52540 45 260 2.18E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 Gene3D G3DSA:3.40.50.300 31 264 4.3E-69 T 11-10-2018 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 45 488 52.338 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 Gene3D G3DSA:3.40.50.300 465 658 9.3E-72 T 11-10-2018 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 Pfam PF01583 Adenylylsulphate kinase 489 641 6.3E-67 T 11-10-2018 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 54 458 5.9E-195 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 Pfam PF00009 Elongation factor Tu GTP binding domain 53 252 8.1E-41 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_07200 680eab0f8d95fd2bda363687bad76e4d 660 SUPERFAMILY SSF50465 357 458 3.6E-31 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XFC3_09060 32e4f9392e73bb714ef20a68fe91753e 1279 Pfam PF13502 AsmA-like C-terminal region 1011 1253 1.2E-58 T 11-10-2018 IPR032712 AsmA-like, C-terminal XFC3_09060 32e4f9392e73bb714ef20a68fe91753e 1279 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 12 1263 1.9E-284 T 11-10-2018 IPR011836 Conserved hypothetical protein CHP02099 XFC3_09060 32e4f9392e73bb714ef20a68fe91753e 1279 Pfam PF13116 Protein of unknown function 507 782 1.2E-36 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 XFC3_11860 930147f7baa602acb8831193fcd3e97d 519 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 31 485 2.8E-130 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 XFC3_11860 930147f7baa602acb8831193fcd3e97d 519 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 2 501 43.002 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 XFC3_10280 1fc7671d1a4c245d623712aa5d26837d 554 SUPERFAMILY SSF52540 302 523 6.69E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_10280 1fc7671d1a4c245d623712aa5d26837d 554 SUPERFAMILY SSF52540 10 244 8.67E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_10280 1fc7671d1a4c245d623712aa5d26837d 554 Pfam PF12848 ABC transporter 231 307 2.2E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain XFC3_10280 1fc7671d1a4c245d623712aa5d26837d 554 Gene3D G3DSA:3.40.50.300 2 286 1.4E-82 T 11-10-2018 XFC3_10280 1fc7671d1a4c245d623712aa5d26837d 554 Pfam PF00005 ABC transporter 341 474 2.0E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_10280 1fc7671d1a4c245d623712aa5d26837d 554 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_10280 1fc7671d1a4c245d623712aa5d26837d 554 SMART SM00382 32 237 4.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_10280 1fc7671d1a4c245d623712aa5d26837d 554 SMART SM00382 349 527 6.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_10280 1fc7671d1a4c245d623712aa5d26837d 554 Gene3D G3DSA:3.40.50.300 287 548 3.9E-73 T 11-10-2018 XFC3_10280 1fc7671d1a4c245d623712aa5d26837d 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 7.6E-288 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 XFC3_10280 1fc7671d1a4c245d623712aa5d26837d 554 Pfam PF00005 ABC transporter 24 192 3.2E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_04790 8b6226c33c5941a8ba10303da9eb42a6 73 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 9 73 2.4E-32 T 11-10-2018 IPR012662 Conserved hypothetical protein CHP02449 XFC3_06670 737d33f50c89c08532ebfb3ca30c38ef 634 Pfam PF13632 Glycosyl transferase family group 2 236 476 6.8E-16 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XFC3_06670 737d33f50c89c08532ebfb3ca30c38ef 634 SUPERFAMILY SSF53448 137 423 1.69E-27 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_06670 737d33f50c89c08532ebfb3ca30c38ef 634 Gene3D G3DSA:3.90.550.10 132 364 9.1E-17 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_06670 737d33f50c89c08532ebfb3ca30c38ef 634 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 1 634 46.168 T 11-10-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 XFC3_00380 4b4f07fd9e54f220e38898ccddc91fde 643 SMART SM00382 195 334 6.4E-26 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_00380 4b4f07fd9e54f220e38898ccddc91fde 643 Gene3D G3DSA:1.20.58.760 413 610 7.7E-74 T 11-10-2018 XFC3_00380 4b4f07fd9e54f220e38898ccddc91fde 643 SUPERFAMILY SSF140990 414 612 1.44E-75 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 XFC3_00380 4b4f07fd9e54f220e38898ccddc91fde 643 ProSitePatterns PS00674 AAA-protein family signature. 302 320 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 XFC3_00380 4b4f07fd9e54f220e38898ccddc91fde 643 SUPERFAMILY SSF52540 158 402 2.49E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_00380 4b4f07fd9e54f220e38898ccddc91fde 643 Gene3D G3DSA:3.40.50.300 150 331 7.9E-70 T 11-10-2018 XFC3_00380 4b4f07fd9e54f220e38898ccddc91fde 643 Pfam PF01434 Peptidase family M41 393 603 8.1E-83 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 XFC3_00380 4b4f07fd9e54f220e38898ccddc91fde 643 Gene3D G3DSA:1.10.8.60 333 410 3.8E-28 T 11-10-2018 XFC3_00380 4b4f07fd9e54f220e38898ccddc91fde 643 Pfam PF06480 FtsH Extracellular 9 99 1.6E-8 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 XFC3_00380 4b4f07fd9e54f220e38898ccddc91fde 643 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 199 330 5.9E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFC3_00380 4b4f07fd9e54f220e38898ccddc91fde 643 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 112 604 1.3E-241 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 XFC3_00380 4b4f07fd9e54f220e38898ccddc91fde 643 Gene3D G3DSA:2.40.50.920 34 107 2.1E-5 T 11-10-2018 XFC3_00380 4b4f07fd9e54f220e38898ccddc91fde 643 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 631 37.232 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 XFC3_06360 f6bac9fa2253cbbcfae61db2cddde782 72 Pfam PF12553 Protein of unknown function (DUF3742) 1 45 1.3E-16 T 11-10-2018 IPR022213 Protein of unknown function DUF3742 XFC3_08775 0ae240216ae7286ba02d60c612d59ad2 94 Gene3D G3DSA:4.10.520.10 1 93 8.1E-35 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFC3_08775 0ae240216ae7286ba02d60c612d59ad2 94 SUPERFAMILY SSF47729 1 90 6.92E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFC3_08775 0ae240216ae7286ba02d60c612d59ad2 94 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_08775 0ae240216ae7286ba02d60c612d59ad2 94 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_08775 0ae240216ae7286ba02d60c612d59ad2 94 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_08775 0ae240216ae7286ba02d60c612d59ad2 94 SMART SM00411 1 90 4.5E-41 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_08775 0ae240216ae7286ba02d60c612d59ad2 94 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.5E-33 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 Pfam PF02096 60Kd inner membrane protein 370 549 4.7E-56 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 552 21.218 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 Gene3D G3DSA:2.70.98.90 73 347 2.4E-69 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 Pfam PF14849 YidC periplasmic domain 77 358 1.2E-64 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 367 2.6E-60 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR01900 YidC translocation/secretion protein signature 505 529 9.7E-15 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR01900 YidC translocation/secretion protein signature 484 499 9.7E-15 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR01900 YidC translocation/secretion protein signature 355 371 9.7E-15 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 369 549 1.6E-65 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR00701 60kDa inner membrane protein signature 2 23 9.6E-48 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR00701 60kDa inner membrane protein signature 431 454 9.6E-48 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR00701 60kDa inner membrane protein signature 516 539 9.6E-48 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR00701 60kDa inner membrane protein signature 172 192 9.6E-48 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR00701 60kDa inner membrane protein signature 230 248 9.6E-48 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR00701 60kDa inner membrane protein signature 478 500 9.6E-48 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XFC3_12590 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR00701 60kDa inner membrane protein signature 264 279 9.6E-48 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 SUPERFAMILY SSF53748 3 387 6.24E-142 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 388 38.196 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 Gene3D G3DSA:3.40.50.1260 165 378 2.8E-143 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 Gene3D G3DSA:3.40.50.1260 8 386 2.8E-143 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 PIRSF PIRSF000724 1 390 1.9E-130 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 Pfam PF00162 Phosphoglycerate kinase 6 378 1.3E-137 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10835 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_03705 62a113c849c8972d220932ee38859f60 206 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 206 35.04 T 11-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 XFC3_03705 62a113c849c8972d220932ee38859f60 206 Gene3D G3DSA:1.10.287.1080 115 206 1.2E-24 T 11-10-2018 XFC3_03705 62a113c849c8972d220932ee38859f60 206 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 124 202 4.2E-11 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 XFC3_03705 62a113c849c8972d220932ee38859f60 206 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 2.0E-29 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 XFC3_03705 62a113c849c8972d220932ee38859f60 206 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 1.0E-23 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 XFC3_03705 62a113c849c8972d220932ee38859f60 206 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 119 200 1.0E-25 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 XFC3_03705 62a113c849c8972d220932ee38859f60 206 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 115 201 17.216 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 XFC3_03705 62a113c849c8972d220932ee38859f60 206 SUPERFAMILY SSF101386 119 205 2.03E-19 T 11-10-2018 XFC3_03705 62a113c849c8972d220932ee38859f60 206 Gene3D G3DSA:3.10.20.400 9 102 4.5E-33 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 XFC3_03705 62a113c849c8972d220932ee38859f60 206 SUPERFAMILY SSF141734 12 113 7.45E-42 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 XFC3_03430 625832884d13ee89e89360383afe2805 240 SUPERFAMILY SSF53448 5 228 3.17E-38 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_03430 625832884d13ee89e89360383afe2805 240 Pfam PF00535 Glycosyl transferase family 2 7 168 6.9E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XFC3_03430 625832884d13ee89e89360383afe2805 240 Gene3D G3DSA:3.90.550.10 2 232 2.0E-30 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_01585 9d3d479fc5808333b8eaa1948b8cca73 552 Pfam PF08019 Domain of unknown function (DUF1705) 69 217 5.2E-45 T 11-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 XFC3_01585 9d3d479fc5808333b8eaa1948b8cca73 552 SUPERFAMILY SSF53649 244 536 1.74E-15 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 XFC3_01585 9d3d479fc5808333b8eaa1948b8cca73 552 Pfam PF00884 Sulfatase 247 534 3.1E-52 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 XFC3_01585 9d3d479fc5808333b8eaa1948b8cca73 552 Gene3D G3DSA:3.40.720.10 231 552 1.1E-80 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XFC3_12585 5fe52d0a24d15f587e5a0b16f03b71ea 903 SUPERFAMILY SSF52129 471 700 3.98E-17 T 11-10-2018 IPR029030 Caspase-like domain superfamily XFC3_12585 5fe52d0a24d15f587e5a0b16f03b71ea 903 SUPERFAMILY SSF48452 770 892 6.75E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_12585 5fe52d0a24d15f587e5a0b16f03b71ea 903 Gene3D G3DSA:3.20.20.370 221 450 6.4E-51 T 11-10-2018 XFC3_12585 5fe52d0a24d15f587e5a0b16f03b71ea 903 Pfam PF01522 Polysaccharide deacetylase 250 382 4.7E-27 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XFC3_12585 5fe52d0a24d15f587e5a0b16f03b71ea 903 SUPERFAMILY SSF88713 236 447 5.68E-47 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XFC3_12585 5fe52d0a24d15f587e5a0b16f03b71ea 903 Gene3D G3DSA:3.40.50.1460 474 707 5.9E-32 T 11-10-2018 XFC3_12585 5fe52d0a24d15f587e5a0b16f03b71ea 903 Pfam PF00656 Caspase domain 477 670 7.5E-23 T 11-10-2018 XFC3_12585 5fe52d0a24d15f587e5a0b16f03b71ea 903 Gene3D G3DSA:1.25.40.10 785 899 8.9E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_12585 5fe52d0a24d15f587e5a0b16f03b71ea 903 ProSitePatterns PS00018 EF-hand calcium-binding domain. 671 683 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site XFC3_04250 a6ee0b6579ae5152c2b5e44000b03fbd 364 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 53 361 1.3E-122 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 XFC3_04250 a6ee0b6579ae5152c2b5e44000b03fbd 364 Gene3D G3DSA:3.40.190.10 127 303 3.8E-125 T 11-10-2018 XFC3_04250 a6ee0b6579ae5152c2b5e44000b03fbd 364 SUPERFAMILY SSF53850 53 360 1.51E-96 T 11-10-2018 XFC3_04250 a6ee0b6579ae5152c2b5e44000b03fbd 364 Pfam PF12849 PBP superfamily domain 45 332 6.4E-59 T 11-10-2018 IPR024370 PBP domain XFC3_04250 a6ee0b6579ae5152c2b5e44000b03fbd 364 PIRSF PIRSF002756 4 362 7.2E-106 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 XFC3_04250 a6ee0b6579ae5152c2b5e44000b03fbd 364 Gene3D G3DSA:3.40.190.10 54 350 3.8E-125 T 11-10-2018 XFC3_01855 a9866cfb8be0f65744a5faf0e621ae3d 124 SUPERFAMILY SSF81273 80 122 5.89E-12 T 11-10-2018 XFC3_01855 a9866cfb8be0f65744a5faf0e621ae3d 124 Gene3D G3DSA:4.10.430.10 70 124 1.8E-16 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 XFC3_01855 a9866cfb8be0f65744a5faf0e621ae3d 124 Pfam PF00816 H-NS histone family 13 115 1.4E-20 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 XFC3_01855 a9866cfb8be0f65744a5faf0e621ae3d 124 SMART SM00528 74 121 7.5E-12 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 XFC3_05155 af96c18a4be1657b45881e837eea91ab 289 Gene3D G3DSA:3.20.20.70 129 271 1.1E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_05155 af96c18a4be1657b45881e837eea91ab 289 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 26 113 8.7E-27 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 XFC3_05155 af96c18a4be1657b45881e837eea91ab 289 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 15 281 2.8E-96 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 XFC3_05155 af96c18a4be1657b45881e837eea91ab 289 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 115 280 8.0E-59 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 XFC3_05155 af96c18a4be1657b45881e837eea91ab 289 SUPERFAMILY SSF51690 115 281 2.63E-58 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XFC3_05155 af96c18a4be1657b45881e837eea91ab 289 Gene3D G3DSA:3.90.1170.20 18 279 1.1E-100 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 XFC3_05155 af96c18a4be1657b45881e837eea91ab 289 PIRSF PIRSF006250 8 284 2.6E-94 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 XFC3_05155 af96c18a4be1657b45881e837eea91ab 289 SUPERFAMILY SSF54675 2 114 9.81E-32 T 11-10-2018 XFC3_03270 4ea474be9803d39c8ff729c8f2384cf2 144 Pfam PF04865 Baseplate J-like protein 17 104 2.2E-11 T 11-10-2018 IPR006949 Baseplate protein J-like XFC3_08695 aa3d8eae98ca9e13e49b18694af72d0a 54 Pfam PF00471 Ribosomal protein L33 7 52 5.8E-18 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08695 aa3d8eae98ca9e13e49b18694af72d0a 54 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 54 2.3E-24 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08695 aa3d8eae98ca9e13e49b18694af72d0a 54 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 4 52 14.671 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08695 aa3d8eae98ca9e13e49b18694af72d0a 54 Gene3D G3DSA:2.20.28.120 1 54 6.8E-27 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08695 aa3d8eae98ca9e13e49b18694af72d0a 54 ProSitePatterns PS00582 Ribosomal protein L33 signature. 20 39 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08695 aa3d8eae98ca9e13e49b18694af72d0a 54 SUPERFAMILY SSF57829 3 52 1.71E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 XFC3_01015 313a3f61999b2d03dadc9c5eb3020c24 125 SUPERFAMILY SSF89919 4 112 6.41E-27 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily XFC3_01015 313a3f61999b2d03dadc9c5eb3020c24 125 Gene3D G3DSA:3.30.300.20 3 105 8.9E-28 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta XFC3_01015 313a3f61999b2d03dadc9c5eb3020c24 125 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 7 110 25.894 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XFC3_01015 313a3f61999b2d03dadc9c5eb3020c24 125 Pfam PF02033 Ribosome-binding factor A 8 110 7.8E-27 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XFC3_01015 313a3f61999b2d03dadc9c5eb3020c24 125 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 XFC3_01015 313a3f61999b2d03dadc9c5eb3020c24 125 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 7 113 3.1E-25 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XFC3_01015 313a3f61999b2d03dadc9c5eb3020c24 125 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 97 1.0E-44 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XFC3_05915 ff81d7d2f900f04de8f46b519ea94428 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.6E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XFC3_05915 ff81d7d2f900f04de8f46b519ea94428 112 PRINTS PR00340 P-II protein signature 83 103 7.5E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XFC3_05915 ff81d7d2f900f04de8f46b519ea94428 112 PRINTS PR00340 P-II protein signature 2 17 7.5E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XFC3_05915 ff81d7d2f900f04de8f46b519ea94428 112 PRINTS PR00340 P-II protein signature 52 75 7.5E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XFC3_05915 ff81d7d2f900f04de8f46b519ea94428 112 PRINTS PR00340 P-II protein signature 23 41 7.5E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XFC3_05915 ff81d7d2f900f04de8f46b519ea94428 112 PIRSF PIRSF039144 1 112 2.8E-52 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XFC3_05915 ff81d7d2f900f04de8f46b519ea94428 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 XFC3_05915 ff81d7d2f900f04de8f46b519ea94428 112 SMART SM00938 4 105 2.0E-61 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XFC3_05915 ff81d7d2f900f04de8f46b519ea94428 112 SUPERFAMILY SSF54913 1 112 2.39E-44 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta XFC3_05915 ff81d7d2f900f04de8f46b519ea94428 112 Gene3D G3DSA:3.30.70.120 1 112 2.7E-44 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XFC3_01340 458ee582098d6b3926b91b1e0fb4cab3 175 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 174 9.1E-62 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01340 458ee582098d6b3926b91b1e0fb4cab3 175 PIRSF PIRSF000216 8 175 4.5E-51 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01340 458ee582098d6b3926b91b1e0fb4cab3 175 Gene3D G3DSA:1.10.10.1590 18 90 5.5E-21 T 11-10-2018 XFC3_01340 458ee582098d6b3926b91b1e0fb4cab3 175 SUPERFAMILY SSF52833 20 174 5.37E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_01340 458ee582098d6b3926b91b1e0fb4cab3 175 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 27 174 2.3E-46 T 11-10-2018 XFC3_01340 458ee582098d6b3926b91b1e0fb4cab3 175 Gene3D G3DSA:3.40.30.10 92 175 1.9E-22 T 11-10-2018 XFC3_01225 7a8473188f83cdff38ce70e75750ac22 569 SUPERFAMILY SSF56801 23 558 3.14E-147 T 11-10-2018 XFC3_01225 7a8473188f83cdff38ce70e75750ac22 569 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 548 1.1E-16 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XFC3_01225 7a8473188f83cdff38ce70e75750ac22 569 Gene3D G3DSA:3.30.300.310 461 562 3.6E-29 T 11-10-2018 XFC3_01225 7a8473188f83cdff38ce70e75750ac22 569 ProSitePatterns PS00455 Putative AMP-binding domain signature. 213 224 - T 11-10-2018 IPR020845 AMP-binding, conserved site XFC3_01225 7a8473188f83cdff38ce70e75750ac22 569 Gene3D G3DSA:3.40.50.12780 16 456 3.6E-118 T 11-10-2018 XFC3_01225 7a8473188f83cdff38ce70e75750ac22 569 Pfam PF00501 AMP-binding enzyme 39 465 9.6E-109 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XFC3_06780 942fddabbaef642b688f914adaa18595 117 SUPERFAMILY SSF160719 24 106 2.62E-6 T 11-10-2018 XFC3_02220 0eaaf4fcad725d86e4a557e493e4f9bf 173 Pfam PF10029 Predicted periplasmic protein (DUF2271) 22 162 7.8E-50 T 11-10-2018 IPR014469 Protein of unknown function DUF2271 XFC3_02220 0eaaf4fcad725d86e4a557e493e4f9bf 173 PIRSF PIRSF014995 1 171 2.6E-73 T 11-10-2018 IPR014469 Protein of unknown function DUF2271 XFC3_07710 f0716069095903df59f007f8f701528c 636 Gene3D G3DSA:3.10.620.30 247 386 2.4E-30 T 11-10-2018 XFC3_07710 f0716069095903df59f007f8f701528c 636 SUPERFAMILY SSF54001 256 365 2.78E-10 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XFC3_07710 f0716069095903df59f007f8f701528c 636 Pfam PF01841 Transglutaminase-like superfamily 261 335 1.8E-8 T 11-10-2018 IPR002931 Transglutaminase-like XFC3_07710 f0716069095903df59f007f8f701528c 636 Gene3D G3DSA:2.60.40.3140 30 237 2.2E-37 T 11-10-2018 XFC3_07710 f0716069095903df59f007f8f701528c 636 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 47 214 3.1E-36 T 11-10-2018 IPR024618 Domain of unknown function DUF3857 XFC3_06390 390fa3d516affab08c3f810427a2e6e9 372 SUPERFAMILY SSF53474 47 368 1.09E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_06390 390fa3d516affab08c3f810427a2e6e9 372 Pfam PF05448 Acetyl xylan esterase (AXE1) 155 206 1.7E-6 T 11-10-2018 IPR008391 Acetyl xylan esterase XFC3_06390 390fa3d516affab08c3f810427a2e6e9 372 Gene3D G3DSA:3.40.50.1820 74 352 3.6E-123 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_06390 390fa3d516affab08c3f810427a2e6e9 372 Gene3D G3DSA:1.10.10.800 207 297 3.6E-123 T 11-10-2018 XFC3_11745 2fafdb0eaecd92f6694abc9cde84bb1e 698 SUPERFAMILY SSF140356 21 123 2.35E-34 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 XFC3_11745 2fafdb0eaecd92f6694abc9cde84bb1e 698 Gene3D G3DSA:3.30.870.10 334 517 3.1E-73 T 11-10-2018 XFC3_11745 2fafdb0eaecd92f6694abc9cde84bb1e 698 Gene3D G3DSA:3.30.870.10 521 698 4.2E-63 T 11-10-2018 XFC3_11745 2fafdb0eaecd92f6694abc9cde84bb1e 698 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 25 696 2.6E-275 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 XFC3_11745 2fafdb0eaecd92f6694abc9cde84bb1e 698 Pfam PF13089 Polyphosphate kinase N-terminal domain 25 128 2.1E-30 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 XFC3_11745 2fafdb0eaecd92f6694abc9cde84bb1e 698 Gene3D G3DSA:3.30.1840.10 20 332 1.4E-91 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 XFC3_11745 2fafdb0eaecd92f6694abc9cde84bb1e 698 Pfam PF02503 Polyphosphate kinase middle domain 139 340 1.3E-57 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 XFC3_11745 2fafdb0eaecd92f6694abc9cde84bb1e 698 SUPERFAMILY SSF56024 518 696 9.87E-67 T 11-10-2018 XFC3_11745 2fafdb0eaecd92f6694abc9cde84bb1e 698 PIRSF PIRSF015589 6 698 2.0E-261 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 XFC3_11745 2fafdb0eaecd92f6694abc9cde84bb1e 698 Hamap MF_00347 Polyphosphate kinase [ppk]. 22 691 27.527 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 XFC3_11745 2fafdb0eaecd92f6694abc9cde84bb1e 698 Pfam PF13090 Polyphosphate kinase C-terminal domain 347 694 2.4E-149 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 XFC3_11745 2fafdb0eaecd92f6694abc9cde84bb1e 698 SUPERFAMILY SSF143724 129 333 6.67E-58 T 11-10-2018 XFC3_11745 2fafdb0eaecd92f6694abc9cde84bb1e 698 SUPERFAMILY SSF56024 333 512 3.77E-58 T 11-10-2018 XFC3_08995 367d20165a29fe82b6aac6c79cc30886 466 Gene3D G3DSA:1.10.1140.10 349 466 1.2E-59 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFC3_08995 367d20165a29fe82b6aac6c79cc30886 466 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 9.1E-250 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 XFC3_08995 367d20165a29fe82b6aac6c79cc30886 466 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 4.6E-18 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFC3_08995 367d20165a29fe82b6aac6c79cc30886 466 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.353 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 XFC3_08995 367d20165a29fe82b6aac6c79cc30886 466 SUPERFAMILY SSF47917 349 464 1.18E-54 T 11-10-2018 XFC3_08995 367d20165a29fe82b6aac6c79cc30886 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFC3_08995 367d20165a29fe82b6aac6c79cc30886 466 Gene3D G3DSA:3.40.50.300 74 348 4.2E-110 T 11-10-2018 XFC3_08995 367d20165a29fe82b6aac6c79cc30886 466 SUPERFAMILY SSF52540 75 352 1.81E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08995 367d20165a29fe82b6aac6c79cc30886 466 SMART SM00382 140 409 9.1E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_08995 367d20165a29fe82b6aac6c79cc30886 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.3E-61 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFC3_08995 367d20165a29fe82b6aac6c79cc30886 466 SUPERFAMILY SSF50615 1 72 2.04E-24 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFC3_08995 367d20165a29fe82b6aac6c79cc30886 466 Gene3D G3DSA:2.40.10.170 1 73 3.1E-28 T 11-10-2018 XFC3_08250 e22b6ecafa40231af7cd0fea6870fc2e 269 PIRSF PIRSF003092 1 269 1.6E-91 T 11-10-2018 IPR025501 ATP binding protein MinD XFC3_08250 e22b6ecafa40231af7cd0fea6870fc2e 269 SUPERFAMILY SSF52540 4 267 2.23E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08250 e22b6ecafa40231af7cd0fea6870fc2e 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 266 6.1E-113 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 XFC3_08250 e22b6ecafa40231af7cd0fea6870fc2e 269 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 226 1.8E-22 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain XFC3_08250 e22b6ecafa40231af7cd0fea6870fc2e 269 Gene3D G3DSA:3.40.50.300 1 259 1.3E-66 T 11-10-2018 XFC3_06385 8f6485a85baef2c974c41c15a5e22cd4 167 Gene3D G3DSA:2.40.100.20 51 165 8.5E-12 T 11-10-2018 XFC3_06385 8f6485a85baef2c974c41c15a5e22cd4 167 SUPERFAMILY SSF50891 51 166 3.79E-22 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily XFC3_07280 289ead18f2c116828777efb86fe99d28 473 Pfam PF00176 SNF2 family N-terminal domain 25 265 9.0E-15 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 XFC3_07280 289ead18f2c116828777efb86fe99d28 473 SUPERFAMILY SSF52540 117 457 3.19E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07280 289ead18f2c116828777efb86fe99d28 473 SMART SM00487 2 189 1.3E-4 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_07280 289ead18f2c116828777efb86fe99d28 473 Gene3D G3DSA:3.40.50.300 244 471 8.4E-17 T 11-10-2018 XFC3_07280 289ead18f2c116828777efb86fe99d28 473 SUPERFAMILY SSF52540 2 203 2.28E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07280 289ead18f2c116828777efb86fe99d28 473 Gene3D G3DSA:3.40.50.10810 4 229 1.3E-21 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily XFC3_04455 08facca263f0a884d7e3b86c08e5e2a8 1663 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 99 1656 0.0 T 11-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 XFC3_04455 08facca263f0a884d7e3b86c08e5e2a8 1663 SUPERFAMILY SSF51735 1001 1339 2.1E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_04455 08facca263f0a884d7e3b86c08e5e2a8 1663 Pfam PF12466 Glutamate dehydrogenase N terminal 1 95 2.4E-47 T 11-10-2018 IPR024727 Bacterial NAD-glutamate dehydrogenase, N-terminal XFC3_04455 08facca263f0a884d7e3b86c08e5e2a8 1663 SUPERFAMILY SSF53223 811 997 3.45E-20 T 11-10-2018 XFC3_04455 08facca263f0a884d7e3b86c08e5e2a8 1663 PIRSF PIRSF036761 1 1663 0.0 T 11-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 XFC3_05205 6e6aac05634db143be3b4f893267b969 224 Pfam PF00425 chorismate binding enzyme 1 203 1.3E-65 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal XFC3_05205 6e6aac05634db143be3b4f893267b969 224 Gene3D G3DSA:3.60.120.10 1 217 8.3E-83 T 11-10-2018 IPR005801 ADC synthase GO:0009058 XFC3_05205 6e6aac05634db143be3b4f893267b969 224 PRINTS PR00095 Anthranilate synthase component I signature 64 77 4.6E-15 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_05205 6e6aac05634db143be3b4f893267b969 224 PRINTS PR00095 Anthranilate synthase component I signature 144 158 4.6E-15 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_05205 6e6aac05634db143be3b4f893267b969 224 PRINTS PR00095 Anthranilate synthase component I signature 160 174 4.6E-15 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_05205 6e6aac05634db143be3b4f893267b969 224 PRINTS PR00095 Anthranilate synthase component I signature 50 63 4.6E-15 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_05205 6e6aac05634db143be3b4f893267b969 224 SUPERFAMILY SSF56322 1 211 6.02E-78 T 11-10-2018 IPR005801 ADC synthase GO:0009058 XFC3_07095 3f044f69723f05957a7a974ba5cd70ce 281 SUPERFAMILY SSF158544 96 192 3.92E-25 T 11-10-2018 IPR038072 GspK, central domain superfamily XFC3_07095 3f044f69723f05957a7a974ba5cd70ce 281 Pfam PF03934 Type II secretion system (T2SS), protein K 31 262 5.9E-46 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 XFC3_07095 3f044f69723f05957a7a974ba5cd70ce 281 PIRSF PIRSF002786 2 277 5.2E-40 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 XFC3_07095 3f044f69723f05957a7a974ba5cd70ce 281 Gene3D G3DSA:1.10.40.60 90 193 5.2E-19 T 11-10-2018 IPR038072 GspK, central domain superfamily XFC3_09125 8bb245d5bd1a5138d8c35d0109739047 506 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 505 43.066 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFC3_09125 8bb245d5bd1a5138d8c35d0109739047 506 Gene3D G3DSA:3.30.930.10 156 500 5.0E-128 T 11-10-2018 XFC3_09125 8bb245d5bd1a5138d8c35d0109739047 506 SUPERFAMILY SSF55681 163 503 6.58E-115 T 11-10-2018 XFC3_09125 8bb245d5bd1a5138d8c35d0109739047 506 SUPERFAMILY SSF50249 12 156 4.97E-38 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_09125 8bb245d5bd1a5138d8c35d0109739047 506 Pfam PF01336 OB-fold nucleic acid binding domain 70 147 6.8E-15 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XFC3_09125 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 200 210 9.9E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFC3_09125 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 263 280 9.9E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFC3_09125 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 387 403 9.9E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFC3_09125 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 216 232 9.9E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFC3_09125 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 245 258 9.9E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFC3_09125 8bb245d5bd1a5138d8c35d0109739047 506 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 505 1.2E-199 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFC3_09125 8bb245d5bd1a5138d8c35d0109739047 506 Pfam PF00152 tRNA synthetases class II (D, K and N) 164 502 8.1E-79 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_09125 8bb245d5bd1a5138d8c35d0109739047 506 Gene3D G3DSA:2.40.50.140 14 155 2.6E-39 T 11-10-2018 XFC3_09445 2de7009ab830f37ce4ec158354147468 663 SMART SM00939 365 629 1.5E-83 T 11-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 XFC3_09445 2de7009ab830f37ce4ec158354147468 663 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 52 338 1.5E-71 T 11-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 XFC3_09445 2de7009ab830f37ce4ec158354147468 663 SUPERFAMILY SSF49785 407 633 3.61E-73 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFC3_09445 2de7009ab830f37ce4ec158354147468 663 Gene3D G3DSA:1.10.3020.10 208 283 2.5E-125 T 11-10-2018 XFC3_09445 2de7009ab830f37ce4ec158354147468 663 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 49 634 1.3E-71 T 11-10-2018 IPR005674 CocE/Serine esterase GO:0016787 XFC3_09445 2de7009ab830f37ce4ec158354147468 663 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 379 628 8.7E-37 T 11-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 XFC3_09445 2de7009ab830f37ce4ec158354147468 663 Gene3D G3DSA:2.60.120.260 394 632 5.1E-76 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFC3_09445 2de7009ab830f37ce4ec158354147468 663 SUPERFAMILY SSF53474 37 400 7.13E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_09445 2de7009ab830f37ce4ec158354147468 663 Gene3D G3DSA:3.40.50.1820 42 393 2.5E-125 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_08055 d51dbf89efd7db06d444d041e4d82d50 372 PIRSF PIRSF001456 3 361 5.4E-131 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFC3_08055 d51dbf89efd7db06d444d041e4d82d50 372 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFC3_08055 d51dbf89efd7db06d444d041e4d82d50 372 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 35.248 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFC3_08055 d51dbf89efd7db06d444d041e4d82d50 372 SUPERFAMILY SSF103263 4 351 1.22E-140 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFC3_08055 d51dbf89efd7db06d444d041e4d82d50 372 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFC3_08055 d51dbf89efd7db06d444d041e4d82d50 372 Gene3D G3DSA:3.60.150.10 1 362 2.5E-145 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFC3_08055 d51dbf89efd7db06d444d041e4d82d50 372 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFC3_08055 d51dbf89efd7db06d444d041e4d82d50 372 Pfam PF01264 Chorismate synthase 11 345 2.7E-130 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFC3_08055 d51dbf89efd7db06d444d041e4d82d50 372 TIGRFAM TIGR00033 aroC: chorismate synthase 11 350 2.5E-134 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFC3_01925 c50aad42cf17c53252c7278e72b6f976 411 SMART SM00564 131 163 7.2E-6 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFC3_01925 c50aad42cf17c53252c7278e72b6f976 411 SMART SM00564 268 299 0.66 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFC3_01925 c50aad42cf17c53252c7278e72b6f976 411 SMART SM00564 216 248 0.54 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFC3_01925 c50aad42cf17c53252c7278e72b6f976 411 SMART SM00564 305 337 52.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFC3_01925 c50aad42cf17c53252c7278e72b6f976 411 SMART SM00564 172 203 2.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFC3_01925 c50aad42cf17c53252c7278e72b6f976 411 SMART SM00564 76 107 0.0039 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFC3_01925 c50aad42cf17c53252c7278e72b6f976 411 SUPERFAMILY SSF50998 42 399 1.2E-75 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XFC3_01925 c50aad42cf17c53252c7278e72b6f976 411 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 10 408 3.9E-118 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB XFC3_01925 c50aad42cf17c53252c7278e72b6f976 411 Gene3D G3DSA:2.130.10.10 34 410 2.3E-92 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 XFC3_01925 c50aad42cf17c53252c7278e72b6f976 411 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 5 409 36.162 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB XFC3_01925 c50aad42cf17c53252c7278e72b6f976 411 Pfam PF13360 PQQ-like domain 127 336 1.1E-42 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat XFC3_01925 c50aad42cf17c53252c7278e72b6f976 411 Pfam PF01011 PQQ enzyme repeat 81 107 2.1E-4 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat XFC3_10020 1d168d8f02863252b7ead1525effac99 197 SUPERFAMILY SSF46955 26 77 9.77E-9 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFC3_10020 1d168d8f02863252b7ead1525effac99 197 Gene3D G3DSA:1.10.10.10 23 90 2.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_10020 1d168d8f02863252b7ead1525effac99 197 Pfam PF07471 Phage DNA packaging protein Nu1 23 172 7.1E-53 T 11-10-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit XFC3_11325 1d168d8f02863252b7ead1525effac99 197 SUPERFAMILY SSF46955 26 77 9.77E-9 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFC3_11325 1d168d8f02863252b7ead1525effac99 197 Gene3D G3DSA:1.10.10.10 23 90 2.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_11325 1d168d8f02863252b7ead1525effac99 197 Pfam PF07471 Phage DNA packaging protein Nu1 23 172 7.1E-53 T 11-10-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit XFC3_07430 1d168d8f02863252b7ead1525effac99 197 SUPERFAMILY SSF46955 26 77 9.77E-9 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFC3_07430 1d168d8f02863252b7ead1525effac99 197 Gene3D G3DSA:1.10.10.10 23 90 2.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_07430 1d168d8f02863252b7ead1525effac99 197 Pfam PF07471 Phage DNA packaging protein Nu1 23 172 7.1E-53 T 11-10-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit XFC3_09190 95dee6ba8be98403f57d9dbecf9787e1 199 SUPERFAMILY SSF52218 1 195 7.24E-55 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFC3_09190 95dee6ba8be98403f57d9dbecf9787e1 199 Gene3D G3DSA:3.40.50.360 1 196 5.7E-60 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFC3_09190 95dee6ba8be98403f57d9dbecf9787e1 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 195 6.6E-44 T 11-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 XFC3_09190 95dee6ba8be98403f57d9dbecf9787e1 199 Pfam PF03358 NADPH-dependent FMN reductase 66 130 9.7E-9 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 XFC3_10615 463b7b48e2e415d4d8d282eca5d5d421 220 Pfam PF00484 Carbonic anhydrase 37 188 2.1E-49 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XFC3_10615 463b7b48e2e415d4d8d282eca5d5d421 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XFC3_10615 463b7b48e2e415d4d8d282eca5d5d421 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XFC3_10615 463b7b48e2e415d4d8d282eca5d5d421 220 SMART SM00947 30 193 1.6E-66 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XFC3_10615 463b7b48e2e415d4d8d282eca5d5d421 220 SUPERFAMILY SSF53056 2 212 6.41E-77 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 XFC3_10615 463b7b48e2e415d4d8d282eca5d5d421 220 Gene3D G3DSA:3.40.1050.10 1 209 1.6E-80 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 XFC3_03060 88ab9a940f5b5845edaae897a970f1e0 380 SUPERFAMILY SSF53756 2 370 3.24E-58 T 11-10-2018 XFC3_03060 88ab9a940f5b5845edaae897a970f1e0 380 Pfam PF00534 Glycosyl transferases group 1 188 328 6.2E-21 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 XFC3_03060 88ab9a940f5b5845edaae897a970f1e0 380 Gene3D G3DSA:3.40.50.2000 189 338 3.6E-24 T 11-10-2018 XFC3_03060 88ab9a940f5b5845edaae897a970f1e0 380 Gene3D G3DSA:3.40.50.2000 1 188 5.6E-26 T 11-10-2018 XFC3_03060 88ab9a940f5b5845edaae897a970f1e0 380 Pfam PF13439 Glycosyltransferase Family 4 14 179 2.4E-18 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XFC3_09320 ed970fbb85f2b5e5a2882dd11630a576 219 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 11 212 2.5E-83 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 XFC3_09320 ed970fbb85f2b5e5a2882dd11630a576 219 Gene3D G3DSA:3.20.20.70 1 216 3.3E-69 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_09320 ed970fbb85f2b5e5a2882dd11630a576 219 SUPERFAMILY SSF51569 7 213 4.21E-61 T 11-10-2018 XFC3_09320 ed970fbb85f2b5e5a2882dd11630a576 219 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 42 51 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 XFC3_09320 ed970fbb85f2b5e5a2882dd11630a576 219 Pfam PF01081 KDPG and KHG aldolase 12 203 6.4E-63 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 XFC3_02575 ddedbad9276754f8f8868e9eda4e3b26 226 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 213 26.49 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XFC3_02575 ddedbad9276754f8f8868e9eda4e3b26 226 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 177 5.1E-44 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XFC3_02575 ddedbad9276754f8f8868e9eda4e3b26 226 SUPERFAMILY SSF52540 1 213 5.32E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02575 ddedbad9276754f8f8868e9eda4e3b26 226 Pfam PF13500 AAA domain 5 210 4.6E-36 T 11-10-2018 XFC3_02575 ddedbad9276754f8f8868e9eda4e3b26 226 PIRSF PIRSF006755 2 224 7.6E-79 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XFC3_02575 ddedbad9276754f8f8868e9eda4e3b26 226 Gene3D G3DSA:3.40.50.300 4 216 2.3E-62 T 11-10-2018 XFC3_00460 07bdc4ab2ed61ed0551945ec48999959 259 Pfam PF00557 Metallopeptidase family M24 13 243 1.9E-54 T 11-10-2018 IPR000994 Peptidase M24 XFC3_00460 07bdc4ab2ed61ed0551945ec48999959 259 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 5 251 2.2E-99 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFC3_00460 07bdc4ab2ed61ed0551945ec48999959 259 Hamap MF_01974 Methionine aminopeptidase [map]. 4 252 42.612 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFC3_00460 07bdc4ab2ed61ed0551945ec48999959 259 Gene3D G3DSA:3.90.230.10 3 257 1.2E-111 T 11-10-2018 XFC3_00460 07bdc4ab2ed61ed0551945ec48999959 259 SUPERFAMILY SSF55920 6 255 2.88E-93 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like XFC3_00460 07bdc4ab2ed61ed0551945ec48999959 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 3.2E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFC3_00460 07bdc4ab2ed61ed0551945ec48999959 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 3.2E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFC3_00460 07bdc4ab2ed61ed0551945ec48999959 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 3.2E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFC3_00460 07bdc4ab2ed61ed0551945ec48999959 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 3.2E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFC3_00460 07bdc4ab2ed61ed0551945ec48999959 259 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFC3_00345 42e002d04c3f50a86d8b0fd2f8a357d5 162 Gene3D G3DSA:3.90.950.20 1 162 4.7E-58 T 11-10-2018 IPR036653 CinA-like, C-terminal XFC3_00345 42e002d04c3f50a86d8b0fd2f8a357d5 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 159 4.2E-47 T 11-10-2018 IPR008136 CinA, C-terminal XFC3_00345 42e002d04c3f50a86d8b0fd2f8a357d5 162 SUPERFAMILY SSF142433 5 160 5.23E-52 T 11-10-2018 IPR036653 CinA-like, C-terminal XFC3_00345 42e002d04c3f50a86d8b0fd2f8a357d5 162 Pfam PF02464 Competence-damaged protein 9 160 8.0E-54 T 11-10-2018 IPR008136 CinA, C-terminal XFC3_07870 e3d64d33550abfb0225b68578f00f075 182 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 152 1.2E-5 T 11-10-2018 XFC3_07870 e3d64d33550abfb0225b68578f00f075 182 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 20 171 5.1E-34 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XFC3_07870 e3d64d33550abfb0225b68578f00f075 182 Gene3D G3DSA:3.40.50.1000 1 182 2.0E-47 T 11-10-2018 IPR023214 HAD superfamily XFC3_07870 e3d64d33550abfb0225b68578f00f075 182 PIRSF PIRSF006118 7 181 2.4E-65 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XFC3_07870 e3d64d33550abfb0225b68578f00f075 182 SUPERFAMILY SSF56784 17 176 2.85E-33 T 11-10-2018 IPR036412 HAD-like superfamily XFC3_05105 b589757f74a6132e96fb7e18824817b6 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 336 1.1E-153 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFC3_05105 b589757f74a6132e96fb7e18824817b6 666 Pfam PF02780 Transketolase, C-terminal domain 554 659 1.4E-13 T 11-10-2018 IPR033248 Transketolase, C-terminal domain XFC3_05105 b589757f74a6132e96fb7e18824817b6 666 SMART SM00861 357 528 5.0E-67 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XFC3_05105 b589757f74a6132e96fb7e18824817b6 666 SUPERFAMILY SSF52518 7 321 6.29E-118 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFC3_05105 b589757f74a6132e96fb7e18824817b6 666 Gene3D G3DSA:3.40.50.970 5 328 5.7E-130 T 11-10-2018 XFC3_05105 b589757f74a6132e96fb7e18824817b6 666 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFC3_05105 b589757f74a6132e96fb7e18824817b6 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 665 1.5E-287 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 XFC3_05105 b589757f74a6132e96fb7e18824817b6 666 Gene3D G3DSA:3.40.50.920 542 666 9.0E-41 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XFC3_05105 b589757f74a6132e96fb7e18824817b6 666 ProSitePatterns PS00802 Transketolase signature 2. 470 486 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFC3_05105 b589757f74a6132e96fb7e18824817b6 666 SUPERFAMILY SSF52518 343 528 9.03E-66 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFC3_05105 b589757f74a6132e96fb7e18824817b6 666 Pfam PF02779 Transketolase, pyrimidine binding domain 357 528 8.9E-45 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XFC3_05105 b589757f74a6132e96fb7e18824817b6 666 Gene3D G3DSA:3.40.50.970 329 540 1.5E-74 T 11-10-2018 XFC3_05105 b589757f74a6132e96fb7e18824817b6 666 SUPERFAMILY SSF52922 535 666 3.85E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XFC3_09350 ea910e686ace23fbcc3f1ff4e303a5f7 106 PIRSF PIRSF028538 1 106 1.1E-45 T 11-10-2018 IPR014949 Protein of unknown function DUF1820 XFC3_09350 ea910e686ace23fbcc3f1ff4e303a5f7 106 Pfam PF08850 Domain of unknown function (DUF1820) 5 99 6.6E-38 T 11-10-2018 IPR014949 Protein of unknown function DUF1820 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 1.4E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.4E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 488 502 1.4E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 1.4E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 381 397 1.4E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 SMART SM00437 252 525 2.3E-115 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 Gene3D G3DSA:1.10.290.10 260 396 3.1E-170 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF01131 DNA topoisomerase 133 562 2.3E-130 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 618 5.3E-227 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 Gene3D G3DSA:1.10.460.10 139 565 3.1E-170 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 674 55.583 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 312 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 Gene3D G3DSA:3.40.50.140 1 138 7.5E-50 T 11-10-2018 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF01751 Toprim domain 5 117 5.2E-26 T 11-10-2018 IPR006171 TOPRIM domain XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF13368 Topoisomerase C-terminal repeat 715 757 1.4E-13 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF13368 Topoisomerase C-terminal repeat 658 703 8.1E-11 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF13368 Topoisomerase C-terminal repeat 594 653 8.9E-12 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 SMART SM00436 108 196 1.5E-46 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 SMART SM00493 3 103 7.8E-32 T 11-10-2018 IPR006171 TOPRIM domain XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 Gene3D G3DSA:2.70.20.10 188 472 3.1E-170 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XFC3_10380 a2bb845f82c3c320e6427e10fe3010b5 815 SUPERFAMILY SSF56712 3 576 3.53E-186 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XFC3_07495 a89f519d8e0ed79c67d8f31f9eddda12 112 Gene3D G3DSA:3.10.450.40 4 103 9.6E-20 T 11-10-2018 XFC3_07495 a89f519d8e0ed79c67d8f31f9eddda12 112 SUPERFAMILY SSF160719 9 103 1.57E-25 T 11-10-2018 XFC3_07495 a89f519d8e0ed79c67d8f31f9eddda12 112 Pfam PF04965 Gene 25-like lysozyme 16 85 4.0E-14 T 11-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 6.6E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 6.6E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 6.6E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.6E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 6.6E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.6E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 6.6E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 SUPERFAMILY SSF82714 710 796 2.49E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 Gene3D G3DSA:3.30.70.1430 556 657 1.0E-234 T 11-10-2018 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 Gene3D G3DSA:1.20.1640.10 505 1009 1.0E-234 T 11-10-2018 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 SUPERFAMILY SSF82714 182 264 1.57E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 SUPERFAMILY SSF82693 136 322 5.44E-15 T 11-10-2018 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 Gene3D G3DSA:3.30.2090.10 709 798 1.0E-234 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 Gene3D G3DSA:3.30.70.1440 658 855 1.0E-234 T 11-10-2018 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 SUPERFAMILY SSF82866 796 1016 1.31E-47 T 11-10-2018 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 Pfam PF00873 AcrB/AcrD/AcrF family 12 1011 2.3E-158 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 Gene3D G3DSA:3.30.70.1430 40 806 1.0E-234 T 11-10-2018 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 Gene3D G3DSA:1.20.1640.10 13 504 1.0E-234 T 11-10-2018 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 Gene3D G3DSA:3.30.70.1320 134 328 1.0E-234 T 11-10-2018 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 SUPERFAMILY SSF82866 292 491 4.19E-39 T 11-10-2018 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 SUPERFAMILY SSF82693 42 132 3.4E-14 T 11-10-2018 XFC3_01055 cba6d7ad9e427684c07c155decb93b00 1027 Gene3D G3DSA:3.30.2090.10 177 270 1.0E-234 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_07995 9fdb058454d555ed4b5c96e5dc61a3d9 1468 Pfam PF00271 Helicase conserved C-terminal domain 324 445 6.0E-10 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_07995 9fdb058454d555ed4b5c96e5dc61a3d9 1468 Pfam PF04408 Helicase associated domain (HA2) 532 605 1.5E-17 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 XFC3_07995 9fdb058454d555ed4b5c96e5dc61a3d9 1468 Gene3D G3DSA:1.20.120.1080 512 611 8.6E-20 T 11-10-2018 XFC3_07995 9fdb058454d555ed4b5c96e5dc61a3d9 1468 Gene3D G3DSA:3.40.50.300 33 252 5.4E-77 T 11-10-2018 XFC3_07995 9fdb058454d555ed4b5c96e5dc61a3d9 1468 SMART SM00847 529 619 2.4E-32 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 XFC3_07995 9fdb058454d555ed4b5c96e5dc61a3d9 1468 Pfam PF00270 DEAD/DEAH box helicase 92 233 1.0E-6 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFC3_07995 9fdb058454d555ed4b5c96e5dc61a3d9 1468 SUPERFAMILY SSF52540 77 646 4.6E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07995 9fdb058454d555ed4b5c96e5dc61a3d9 1468 Pfam PF11898 Domain of unknown function (DUF3418) 889 1464 7.9E-169 T 11-10-2018 IPR024590 RNA helicase HrpA, C-terminal XFC3_07995 9fdb058454d555ed4b5c96e5dc61a3d9 1468 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 799 873 2.8E-13 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 XFC3_07995 9fdb058454d555ed4b5c96e5dc61a3d9 1468 Gene3D G3DSA:3.40.50.300 301 463 3.3E-52 T 11-10-2018 XFC3_07995 9fdb058454d555ed4b5c96e5dc61a3d9 1468 SMART SM00490 346 446 2.2E-13 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_07995 9fdb058454d555ed4b5c96e5dc61a3d9 1468 SMART SM00382 92 412 8.8E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_07995 9fdb058454d555ed4b5c96e5dc61a3d9 1468 SMART SM00487 72 259 5.4E-27 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_04855 99d37d681ed691bd62afd0405b88f6d2 124 Gene3D G3DSA:1.10.260.40 2 66 3.8E-16 T 11-10-2018 XFC3_04855 99d37d681ed691bd62afd0405b88f6d2 124 Pfam PF01381 Helix-turn-helix 8 63 1.3E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_04855 99d37d681ed691bd62afd0405b88f6d2 124 SUPERFAMILY SSF47413 3 66 1.08E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_04855 99d37d681ed691bd62afd0405b88f6d2 124 SMART SM00530 7 63 4.8E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_06530 3f6cca59ecf654bf99b537de12e9c052 217 Gene3D G3DSA:3.40.190.10 12 200 5.4E-23 T 11-10-2018 XFC3_06530 3f6cca59ecf654bf99b537de12e9c052 217 SUPERFAMILY SSF53850 8 209 7.78E-26 T 11-10-2018 XFC3_06530 3f6cca59ecf654bf99b537de12e9c052 217 Gene3D G3DSA:3.40.190.10 81 183 5.4E-23 T 11-10-2018 XFC3_06530 3f6cca59ecf654bf99b537de12e9c052 217 Pfam PF03466 LysR substrate binding domain 6 202 6.5E-27 T 11-10-2018 IPR005119 LysR, substrate-binding XFC3_01930 b444404221928035e1716ea32690dc61 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 3.3E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_01930 b444404221928035e1716ea32690dc61 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.3E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_01930 b444404221928035e1716ea32690dc61 465 PIRSF PIRSF006485 1 442 2.6E-167 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 XFC3_01930 b444404221928035e1716ea32690dc61 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 159 3.0E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFC3_01930 b444404221928035e1716ea32690dc61 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 178 344 5.0E-26 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFC3_01930 b444404221928035e1716ea32690dc61 465 SUPERFAMILY SSF52540 1 166 1.48E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01930 b444404221928035e1716ea32690dc61 465 Hamap MF_00195 GTPase Der [der]. 2 437 36.059 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 XFC3_01930 b444404221928035e1716ea32690dc61 465 SMART SM00382 177 328 0.28 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_01930 b444404221928035e1716ea32690dc61 465 SMART SM00382 1 166 1.8 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_01930 b444404221928035e1716ea32690dc61 465 Gene3D G3DSA:3.40.50.300 5 167 1.1E-41 T 11-10-2018 XFC3_01930 b444404221928035e1716ea32690dc61 465 Gene3D G3DSA:3.40.50.300 173 349 1.1E-47 T 11-10-2018 XFC3_01930 b444404221928035e1716ea32690dc61 465 SUPERFAMILY SSF52540 139 440 2.1E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01930 b444404221928035e1716ea32690dc61 465 Gene3D G3DSA:3.30.300.20 354 436 5.1E-20 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta XFC3_01930 b444404221928035e1716ea32690dc61 465 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.2E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_01930 b444404221928035e1716ea32690dc61 465 Pfam PF01926 50S ribosome-binding GTPase 180 298 7.8E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_01930 b444404221928035e1716ea32690dc61 465 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 355 434 2.3E-22 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like XFC3_01930 b444404221928035e1716ea32690dc61 465 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 434 8.0E-160 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 XFC3_10370 0b734a92eb8fe589f72e3024a9e1b0f7 381 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 78 292 1.5E-70 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 XFC3_10370 0b734a92eb8fe589f72e3024a9e1b0f7 381 Pfam PF02481 DNA recombination-mediator protein A 83 284 3.2E-72 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 XFC3_10370 0b734a92eb8fe589f72e3024a9e1b0f7 381 SUPERFAMILY SSF102405 87 291 1.72E-39 T 11-10-2018 XFC3_10370 0b734a92eb8fe589f72e3024a9e1b0f7 381 Gene3D G3DSA:3.40.50.450 3 297 5.7E-94 T 11-10-2018 XFC3_10370 0b734a92eb8fe589f72e3024a9e1b0f7 381 Gene3D G3DSA:1.10.10.10 307 377 9.6E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_12285 ddb7cd304fc47a9c29f87b91218c3b8f 525 SUPERFAMILY SSF53335 11 523 1.76E-121 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_12285 ddb7cd304fc47a9c29f87b91218c3b8f 525 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 511 8.5E-221 T 11-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 XFC3_12285 ddb7cd304fc47a9c29f87b91218c3b8f 525 Gene3D G3DSA:3.40.50.150 203 483 2.8E-76 T 11-10-2018 XFC3_12285 ddb7cd304fc47a9c29f87b91218c3b8f 525 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 307 313 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XFC3_12285 ddb7cd304fc47a9c29f87b91218c3b8f 525 Pfam PF12161 HsdM N-terminal domain 12 165 1.1E-19 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain XFC3_12285 ddb7cd304fc47a9c29f87b91218c3b8f 525 Pfam PF02384 N-6 DNA Methylase 181 489 8.9E-107 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 XFC3_12285 ddb7cd304fc47a9c29f87b91218c3b8f 525 Gene3D G3DSA:1.20.1260.30 2 199 1.4E-50 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily XFC3_12285 ddb7cd304fc47a9c29f87b91218c3b8f 525 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 342 366 2.4E-17 T 11-10-2018 XFC3_12285 ddb7cd304fc47a9c29f87b91218c3b8f 525 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 205 221 2.4E-17 T 11-10-2018 XFC3_12285 ddb7cd304fc47a9c29f87b91218c3b8f 525 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 231 245 2.4E-17 T 11-10-2018 XFC3_12285 ddb7cd304fc47a9c29f87b91218c3b8f 525 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 304 316 2.4E-17 T 11-10-2018 XFC3_07475 6dff9436f1075424d198708d7529c35a 195 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 118 5.3E-34 T 11-10-2018 IPR006531 Gp5 N-terminal XFC3_07475 6dff9436f1075424d198708d7529c35a 195 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 193 1.2E-60 T 11-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 XFC3_07475 6dff9436f1075424d198708d7529c35a 195 Gene3D G3DSA:2.40.50.230 1 87 1.8E-26 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XFC3_07475 6dff9436f1075424d198708d7529c35a 195 Gene3D G3DSA:2.60.220.40 90 157 4.2E-12 T 11-10-2018 XFC3_09975 6dff9436f1075424d198708d7529c35a 195 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 118 5.3E-34 T 11-10-2018 IPR006531 Gp5 N-terminal XFC3_09975 6dff9436f1075424d198708d7529c35a 195 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 193 1.2E-60 T 11-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 XFC3_09975 6dff9436f1075424d198708d7529c35a 195 Gene3D G3DSA:2.40.50.230 1 87 1.8E-26 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XFC3_09975 6dff9436f1075424d198708d7529c35a 195 Gene3D G3DSA:2.60.220.40 90 157 4.2E-12 T 11-10-2018 XFC3_11280 6dff9436f1075424d198708d7529c35a 195 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 118 5.3E-34 T 11-10-2018 IPR006531 Gp5 N-terminal XFC3_11280 6dff9436f1075424d198708d7529c35a 195 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 193 1.2E-60 T 11-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 XFC3_11280 6dff9436f1075424d198708d7529c35a 195 Gene3D G3DSA:2.40.50.230 1 87 1.8E-26 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XFC3_11280 6dff9436f1075424d198708d7529c35a 195 Gene3D G3DSA:2.60.220.40 90 157 4.2E-12 T 11-10-2018 XFC3_09585 fe3d25c54bdb77cf4a341be05f5e561b 314 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 273 304 4.7E-7 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 XFC3_09585 fe3d25c54bdb77cf4a341be05f5e561b 314 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 195 304 3.4E-41 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 XFC3_09585 fe3d25c54bdb77cf4a341be05f5e561b 314 SUPERFAMILY SSF109635 183 270 3.66E-26 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily XFC3_09585 fe3d25c54bdb77cf4a341be05f5e561b 314 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 191 313 27.627 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 XFC3_09585 fe3d25c54bdb77cf4a341be05f5e561b 314 Gene3D G3DSA:1.20.120.910 185 313 3.4E-29 T 11-10-2018 XFC3_09585 fe3d25c54bdb77cf4a341be05f5e561b 314 SUPERFAMILY SSF57716 274 312 5.42E-6 T 11-10-2018 XFC3_04100 268b91f0cce2661a74230d7165f645d4 176 SUPERFAMILY SSF53955 4 152 1.59E-43 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_04100 268b91f0cce2661a74230d7165f645d4 176 Pfam PF00959 Phage lysozyme 29 122 7.2E-19 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XFC3_04100 268b91f0cce2661a74230d7165f645d4 176 Gene3D G3DSA:1.10.530.40 3 162 8.8E-49 T 11-10-2018 XFC3_00810 55dcfef69da2c663c41b92945f2dc25b 485 Gene3D G3DSA:3.90.1150.10 27 468 1.2E-149 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFC3_00810 55dcfef69da2c663c41b92945f2dc25b 485 SUPERFAMILY SSF53383 26 479 5.29E-121 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFC3_00810 55dcfef69da2c663c41b92945f2dc25b 485 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 31 478 1.3E-159 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 XFC3_00810 55dcfef69da2c663c41b92945f2dc25b 485 Pfam PF00202 Aminotransferase class-III 46 476 6.6E-113 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFC3_00810 55dcfef69da2c663c41b92945f2dc25b 485 Gene3D G3DSA:3.40.640.10 82 376 1.2E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFC3_00810 55dcfef69da2c663c41b92945f2dc25b 485 PIRSF PIRSF000521 47 453 3.1E-24 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFC3_09645 7ae5504ea29652568287c0949949bd7f 449 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 50 65 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site XFC3_09645 7ae5504ea29652568287c0949949bd7f 449 Gene3D G3DSA:1.10.3860.10 14 429 2.8E-113 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XFC3_09645 7ae5504ea29652568287c0949949bd7f 449 Pfam PF00375 Sodium:dicarboxylate symporter family 23 415 3.9E-100 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 XFC3_09645 7ae5504ea29652568287c0949949bd7f 449 SUPERFAMILY SSF118215 23 416 2.22E-111 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XFC3_09645 7ae5504ea29652568287c0949949bd7f 449 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 16 442 37.679 T 11-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 XFC3_09645 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 341 360 2.0E-35 T 11-10-2018 XFC3_09645 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 2.0E-35 T 11-10-2018 XFC3_09645 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 88 113 2.0E-35 T 11-10-2018 XFC3_09645 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 2.0E-35 T 11-10-2018 XFC3_09645 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 17 37 2.0E-35 T 11-10-2018 XFC3_09645 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 232 251 2.0E-35 T 11-10-2018 XFC3_09645 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 306 332 2.0E-35 T 11-10-2018 XFC3_09645 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 58 78 2.0E-35 T 11-10-2018 XFC3_09645 7ae5504ea29652568287c0949949bd7f 449 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 309 332 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site XFC3_11590 18fcaf79b4effe21142f5f13f2e35c43 354 Gene3D G3DSA:3.40.50.10470 159 351 1.2E-64 T 11-10-2018 XFC3_11590 18fcaf79b4effe21142f5f13f2e35c43 354 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 42 341 3.4E-112 T 11-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XFC3_11590 18fcaf79b4effe21142f5f13f2e35c43 354 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 352 38.535 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XFC3_11590 18fcaf79b4effe21142f5f13f2e35c43 354 Pfam PF01008 Initiation factor 2 subunit family 57 341 5.9E-76 T 11-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 XFC3_11590 18fcaf79b4effe21142f5f13f2e35c43 354 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 17 341 2.2E-139 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XFC3_11590 18fcaf79b4effe21142f5f13f2e35c43 354 Gene3D G3DSA:1.20.120.420 14 153 3.5E-40 T 11-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XFC3_11590 18fcaf79b4effe21142f5f13f2e35c43 354 SUPERFAMILY SSF100950 11 345 1.17E-111 T 11-10-2018 IPR037171 NagB/RpiA transferase-like XFC3_08050 68b063acc8d074f56f836090bd77c68c 344 PIRSF PIRSF000148 9 344 9.8E-130 T 11-10-2018 XFC3_08050 68b063acc8d074f56f836090bd77c68c 344 SUPERFAMILY SSF51735 10 163 1.63E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_08050 68b063acc8d074f56f836090bd77c68c 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 326 2.3E-57 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XFC3_08050 68b063acc8d074f56f836090bd77c68c 344 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 11 340 2.7E-139 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XFC3_08050 68b063acc8d074f56f836090bd77c68c 344 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 9 340 37.003 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XFC3_08050 68b063acc8d074f56f836090bd77c68c 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 11 125 1.4E-32 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XFC3_08050 68b063acc8d074f56f836090bd77c68c 344 Gene3D G3DSA:3.40.50.720 12 338 4.6E-146 T 11-10-2018 XFC3_08050 68b063acc8d074f56f836090bd77c68c 344 Gene3D G3DSA:3.30.360.10 136 322 4.6E-146 T 11-10-2018 XFC3_08050 68b063acc8d074f56f836090bd77c68c 344 SUPERFAMILY SSF55347 135 327 2.38E-73 T 11-10-2018 XFC3_08050 68b063acc8d074f56f836090bd77c68c 344 SMART SM00859 11 126 2.8E-45 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XFC3_06910 b160644a71e393dfcb3bdf6afcd7ab8a 112 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 28 105 1.2E-22 T 11-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system XFC3_06195 d97bf67bbf612713f73bbfd04948b280 291 SUPERFAMILY SSF52540 1 266 1.15E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_06195 d97bf67bbf612713f73bbfd04948b280 291 Pfam PF13614 AAA domain 1 168 9.4E-26 T 11-10-2018 IPR025669 AAA domain XFC3_06195 d97bf67bbf612713f73bbfd04948b280 291 Gene3D G3DSA:3.40.50.300 1 269 1.2E-47 T 11-10-2018 XFC3_08840 86614b0c318f6e0591fec61b1b690797 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08840 86614b0c318f6e0591fec61b1b690797 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.144 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08840 86614b0c318f6e0591fec61b1b690797 126 Gene3D G3DSA:3.90.1030.10 1 116 3.8E-41 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08840 86614b0c318f6e0591fec61b1b690797 126 SUPERFAMILY SSF64263 1 119 5.36E-46 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08840 86614b0c318f6e0591fec61b1b690797 126 Pfam PF01196 Ribosomal protein L17 20 115 2.6E-29 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08840 86614b0c318f6e0591fec61b1b690797 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 116 5.0E-42 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_05855 1af135986c03c0d621d01557ed252dba 308 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 6 203 7.5E-70 T 11-10-2018 IPR010183 Bacteriophage lambda, Bet XFC3_05855 1af135986c03c0d621d01557ed252dba 308 Pfam PF03837 RecT family 19 206 1.5E-23 T 11-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 XFC3_02155 f95930bb85724438135295ce2d991ceb 217 Hamap MF_00165 Thymidylate kinase [tmk]. 10 200 20.851 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 XFC3_02155 f95930bb85724438135295ce2d991ceb 217 Gene3D G3DSA:3.40.50.300 8 202 3.9E-45 T 11-10-2018 XFC3_02155 f95930bb85724438135295ce2d991ceb 217 Pfam PF02223 Thymidylate kinase 14 189 8.8E-36 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 XFC3_02155 f95930bb85724438135295ce2d991ceb 217 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 9 188 8.3E-37 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 XFC3_02155 f95930bb85724438135295ce2d991ceb 217 SUPERFAMILY SSF52540 9 200 2.97E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_03350 3dab682e445d92b7895877d4e151608d 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 145 1.1E-34 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I XFC3_03350 3dab682e445d92b7895877d4e151608d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 4.9E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 XFC3_03350 3dab682e445d92b7895877d4e151608d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 122 137 4.9E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 XFC3_03350 3dab682e445d92b7895877d4e151608d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 4.9E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 XFC3_03350 3dab682e445d92b7895877d4e151608d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 4.9E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 XFC3_03350 3dab682e445d92b7895877d4e151608d 154 SMART SM00226 1 150 4.2E-40 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I XFC3_03350 3dab682e445d92b7895877d4e151608d 154 Gene3D G3DSA:3.40.50.2300 1 154 6.4E-49 T 11-10-2018 XFC3_03350 3dab682e445d92b7895877d4e151608d 154 SUPERFAMILY SSF52788 1 151 2.09E-46 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily XFC3_05485 3adda92b6a6e123c1287c42ce098b6ac 94 Pfam PF10734 Protein of unknown function (DUF2523) 5 83 3.5E-18 T 11-10-2018 IPR019670 Protein of unkown function DUF2523 XFC3_07035 8243a3ae678f12098be88c4fff49bc92 130 Gene3D G3DSA:3.30.230.10 2 130 2.2E-50 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFC3_07035 8243a3ae678f12098be88c4fff49bc92 130 SUPERFAMILY SSF54211 6 130 2.16E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_07035 8243a3ae678f12098be88c4fff49bc92 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 XFC3_07035 8243a3ae678f12098be88c4fff49bc92 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.27 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid XFC3_07035 8243a3ae678f12098be88c4fff49bc92 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.8E-44 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 XFC3_03710 7b980e0d464c65766e4a02da6107505d 232 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 3 227 40.51 T 11-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 XFC3_03710 7b980e0d464c65766e4a02da6107505d 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 117 197 2.2E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFC3_03710 7b980e0d464c65766e4a02da6107505d 232 Gene3D G3DSA:1.10.720.60 18 99 3.7E-70 T 11-10-2018 XFC3_03710 7b980e0d464c65766e4a02da6107505d 232 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 6 213 7.3E-76 T 11-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 XFC3_03710 7b980e0d464c65766e4a02da6107505d 232 SUPERFAMILY SSF56784 1 230 2.16E-57 T 11-10-2018 IPR036412 HAD-like superfamily XFC3_03710 7b980e0d464c65766e4a02da6107505d 232 Gene3D G3DSA:3.40.50.1000 6 213 3.7E-70 T 11-10-2018 IPR023214 HAD superfamily XFC3_00360 2befb4597ed22ab182d9b09736203d9d 92 SUPERFAMILY SSF50182 7 68 4.62E-24 T 11-10-2018 IPR010920 LSM domain superfamily XFC3_00360 2befb4597ed22ab182d9b09736203d9d 92 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.485 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 XFC3_00360 2befb4597ed22ab182d9b09736203d9d 92 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 9.6E-30 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 XFC3_00360 2befb4597ed22ab182d9b09736203d9d 92 Pfam PF17209 Hfq protein 7 68 6.9E-31 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 XFC3_00360 2befb4597ed22ab182d9b09736203d9d 92 Gene3D G3DSA:2.30.30.100 1 70 7.4E-33 T 11-10-2018 XFC3_02060 eac8a6f27802385f8968d3409a311c35 341 Pfam PF03193 RsgA GTPase 96 270 1.4E-44 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 XFC3_02060 eac8a6f27802385f8968d3409a311c35 341 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 81 325 1.2E-42 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 XFC3_02060 eac8a6f27802385f8968d3409a311c35 341 SUPERFAMILY SSF52540 113 328 5.33E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02060 eac8a6f27802385f8968d3409a311c35 341 Gene3D G3DSA:3.40.50.300 99 270 8.3E-44 T 11-10-2018 XFC3_02060 eac8a6f27802385f8968d3409a311c35 341 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 38 333 30.619 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 XFC3_02060 eac8a6f27802385f8968d3409a311c35 341 Gene3D G3DSA:1.10.40.50 271 339 2.3E-18 T 11-10-2018 XFC3_07680 1a97cb7e74ae53d8687fd8dfe22d6f15 245 Gene3D G3DSA:3.40.50.720 3 245 5.6E-69 T 11-10-2018 XFC3_07680 1a97cb7e74ae53d8687fd8dfe22d6f15 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 1.3E-49 T 11-10-2018 XFC3_07680 1a97cb7e74ae53d8687fd8dfe22d6f15 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_07680 1a97cb7e74ae53d8687fd8dfe22d6f15 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_07680 1a97cb7e74ae53d8687fd8dfe22d6f15 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_07680 1a97cb7e74ae53d8687fd8dfe22d6f15 245 SUPERFAMILY SSF51735 6 244 7.58E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_07680 1a97cb7e74ae53d8687fd8dfe22d6f15 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_07680 1a97cb7e74ae53d8687fd8dfe22d6f15 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_07680 1a97cb7e74ae53d8687fd8dfe22d6f15 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_07680 1a97cb7e74ae53d8687fd8dfe22d6f15 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_07680 1a97cb7e74ae53d8687fd8dfe22d6f15 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_07680 1a97cb7e74ae53d8687fd8dfe22d6f15 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_07680 1a97cb7e74ae53d8687fd8dfe22d6f15 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XFC3_12150 37169fc187fec375144f373c6d31f1f3 228 SMART SM00382 29 216 1.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_12150 37169fc187fec375144f373c6d31f1f3 228 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_12150 37169fc187fec375144f373c6d31f1f3 228 SUPERFAMILY SSF52540 3 225 1.62E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_12150 37169fc187fec375144f373c6d31f1f3 228 Pfam PF00005 ABC transporter 20 167 4.6E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_12150 37169fc187fec375144f373c6d31f1f3 228 Gene3D G3DSA:3.40.50.300 2 228 4.5E-64 T 11-10-2018 XFC3_01735 fe2ec5c1d755f7041a8dbc9c6235da82 351 Pfam PF04333 MlaA lipoprotein 116 307 7.1E-67 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XFC3_01735 fe2ec5c1d755f7041a8dbc9c6235da82 351 PRINTS PR01805 VacJ lipoprotein signature 117 130 1.3E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XFC3_01735 fe2ec5c1d755f7041a8dbc9c6235da82 351 PRINTS PR01805 VacJ lipoprotein signature 185 202 1.3E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XFC3_01735 fe2ec5c1d755f7041a8dbc9c6235da82 351 PRINTS PR01805 VacJ lipoprotein signature 134 150 1.3E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XFC3_01735 fe2ec5c1d755f7041a8dbc9c6235da82 351 PRINTS PR01805 VacJ lipoprotein signature 221 238 1.3E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XFC3_01995 0026ad69e9fce2c19bc3a5ccce29e35f 347 Pfam PF01385 Probable transposase 120 234 5.4E-24 T 11-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 XFC3_01995 0026ad69e9fce2c19bc3a5ccce29e35f 347 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 205 273 8.2E-7 T 11-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal XFC3_01995 0026ad69e9fce2c19bc3a5ccce29e35f 347 Pfam PF07282 Putative transposase DNA-binding domain 248 317 9.7E-23 T 11-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal XFC3_03975 ab561f63dc1d50c7bd4960a71f8de393 204 Pfam PF01161 Phosphatidylethanolamine-binding protein 27 196 3.3E-34 T 11-10-2018 IPR008914 Phosphatidylethanolamine-binding protein XFC3_03975 ab561f63dc1d50c7bd4960a71f8de393 204 SUPERFAMILY SSF49777 1 199 3.92E-39 T 11-10-2018 IPR036610 PEBP-like superfamily XFC3_03975 ab561f63dc1d50c7bd4960a71f8de393 204 Gene3D G3DSA:3.90.280.10 1 198 3.1E-44 T 11-10-2018 IPR036610 PEBP-like superfamily XFC3_03975 ab561f63dc1d50c7bd4960a71f8de393 204 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 28 196 7.5E-23 T 11-10-2018 IPR005247 YbhB/YbcL XFC3_06770 1786449dde41682b71f9cd5f01ae803f 98 PIRSF PIRSF028744 1 98 4.9E-41 T 11-10-2018 IPR014056 Addiction module killer protein, predicted XFC3_06770 1786449dde41682b71f9cd5f01ae803f 98 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 96 3.1E-40 T 11-10-2018 IPR014056 Addiction module killer protein, predicted XFC3_08690 93298e1136b1032ac6f7a596868f550b 467 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 464 4.0E-101 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 XFC3_08690 93298e1136b1032ac6f7a596868f550b 467 SUPERFAMILY SSF56024 100 296 6.28E-45 T 11-10-2018 XFC3_08690 93298e1136b1032ac6f7a596868f550b 467 Gene3D G3DSA:3.30.870.10 298 439 1.2E-21 T 11-10-2018 XFC3_08690 93298e1136b1032ac6f7a596868f550b 467 SMART SM00155 209 236 0.0042 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XFC3_08690 93298e1136b1032ac6f7a596868f550b 467 SMART SM00155 380 407 0.47 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XFC3_08690 93298e1136b1032ac6f7a596868f550b 467 SUPERFAMILY SSF56024 258 454 1.48E-43 T 11-10-2018 XFC3_08690 93298e1136b1032ac6f7a596868f550b 467 Pfam PF13091 PLD-like domain 125 266 5.0E-17 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XFC3_08690 93298e1136b1032ac6f7a596868f550b 467 Pfam PF13091 PLD-like domain 310 429 7.8E-24 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XFC3_08690 93298e1136b1032ac6f7a596868f550b 467 Gene3D G3DSA:3.30.870.10 107 297 4.4E-32 T 11-10-2018 XFC3_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 SUPERFAMILY SSF56655 7 257 1.96E-73 T 11-10-2018 XFC3_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 XFC3_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 6.1E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFC3_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 6.1E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFC3_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 6.1E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFC3_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 Gene3D G3DSA:3.40.190.80 155 258 2.9E-30 T 11-10-2018 XFC3_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 Pfam PF00459 Inositol monophosphatase family 13 249 2.2E-45 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFC3_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 8 256 40.198 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 XFC3_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 254 2.9E-86 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 XFC3_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 Gene3D G3DSA:3.30.540.10 6 154 2.7E-43 T 11-10-2018 XFC3_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site XFC3_06485 662fe0aadd647410c4cb7dae5deaa531 305 Gene3D G3DSA:1.10.10.10 1 88 1.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_06485 662fe0aadd647410c4cb7dae5deaa531 305 Gene3D G3DSA:3.40.190.10 90 295 5.3E-59 T 11-10-2018 XFC3_06485 662fe0aadd647410c4cb7dae5deaa531 305 Gene3D G3DSA:3.40.190.10 162 269 5.3E-59 T 11-10-2018 XFC3_06485 662fe0aadd647410c4cb7dae5deaa531 305 SUPERFAMILY SSF46785 1 110 1.32E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_06485 662fe0aadd647410c4cb7dae5deaa531 305 SUPERFAMILY SSF53850 86 300 4.89E-39 T 11-10-2018 XFC3_06485 662fe0aadd647410c4cb7dae5deaa531 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.1E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_06485 662fe0aadd647410c4cb7dae5deaa531 305 Pfam PF03466 LysR substrate binding domain 87 298 1.1E-41 T 11-10-2018 IPR005119 LysR, substrate-binding XFC3_11665 116488669b6270226d775bc43e8d2c8b 351 SUPERFAMILY SSF51395 1 338 3.05E-101 T 11-10-2018 XFC3_11665 116488669b6270226d775bc43e8d2c8b 351 Pfam PF01180 Dihydroorotate dehydrogenase 45 336 1.8E-89 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 XFC3_11665 116488669b6270226d775bc43e8d2c8b 351 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 XFC3_11665 116488669b6270226d775bc43e8d2c8b 351 Gene3D G3DSA:3.20.20.70 1 336 6.7E-128 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_11665 116488669b6270226d775bc43e8d2c8b 351 PIRSF PIRSF000164 15 346 1.2E-96 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 XFC3_11665 116488669b6270226d775bc43e8d2c8b 351 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 340 1.0E-124 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 XFC3_11665 116488669b6270226d775bc43e8d2c8b 351 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 336 48.715 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 SUPERFAMILY SSF82866 296 497 3.4E-47 T 11-10-2018 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 SUPERFAMILY SSF82714 182 272 3.27E-23 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 Gene3D G3DSA:3.30.70.1430 38 820 0.0 T 11-10-2018 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 11-10-2018 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 Gene3D G3DSA:1.20.1640.10 513 1025 0.0 T 11-10-2018 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 SUPERFAMILY SSF82693 135 330 4.39E-22 T 11-10-2018 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 SUPERFAMILY SSF82693 563 664 1.41E-28 T 11-10-2018 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 11-10-2018 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 SUPERFAMILY SSF82866 832 1028 8.89E-42 T 11-10-2018 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1040 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 Gene3D G3DSA:3.30.2090.10 717 812 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 Gene3D G3DSA:3.30.70.1440 667 865 0.0 T 11-10-2018 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 SUPERFAMILY SSF82714 716 808 3.14E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 SUPERFAMILY SSF82693 665 858 2.2E-23 T 11-10-2018 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 Gene3D G3DSA:3.30.70.1430 567 666 0.0 T 11-10-2018 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.2E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.2E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 PRINTS PR00702 Acriflavin resistance protein family signature 617 631 1.2E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.2E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.2E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.2E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.2E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 1.2E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.2E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_04440 1e0c94102f52f8b7edf452bace205e6b 1055 SUPERFAMILY SSF82693 38 132 1.15E-27 T 11-10-2018 XFC3_08025 f21797e1f32c9f18813a9e8dfa45592c 268 Pfam PF00290 Tryptophan synthase alpha chain 8 246 3.4E-81 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFC3_08025 f21797e1f32c9f18813a9e8dfa45592c 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 245 1.2E-69 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFC3_08025 f21797e1f32c9f18813a9e8dfa45592c 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 263 33.631 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFC3_08025 f21797e1f32c9f18813a9e8dfa45592c 268 SUPERFAMILY SSF51366 1 243 1.41E-83 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XFC3_08025 f21797e1f32c9f18813a9e8dfa45592c 268 Gene3D G3DSA:3.20.20.70 1 268 1.8E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_08025 f21797e1f32c9f18813a9e8dfa45592c 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFC3_10760 9068bf5b55df1f002ed8a60eae13eb53 790 SUPERFAMILY SSF48208 299 760 5.78E-25 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 XFC3_10760 9068bf5b55df1f002ed8a60eae13eb53 790 Gene3D G3DSA:1.20.1610.10 476 638 4.0E-238 T 11-10-2018 XFC3_10760 9068bf5b55df1f002ed8a60eae13eb53 790 Gene3D G3DSA:2.70.98.10 49 385 4.0E-238 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 XFC3_10760 9068bf5b55df1f002ed8a60eae13eb53 790 Gene3D G3DSA:3.30.2080.10 332 766 4.0E-238 T 11-10-2018 XFC3_10760 9068bf5b55df1f002ed8a60eae13eb53 790 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 42 766 3.1E-195 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative XFC3_10760 9068bf5b55df1f002ed8a60eae13eb53 790 Gene3D G3DSA:1.20.1050.60 386 475 4.0E-238 T 11-10-2018 XFC3_10760 9068bf5b55df1f002ed8a60eae13eb53 790 Pfam PF07971 Glycosyl hydrolase family 92 274 762 9.7E-163 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 XFC3_10360 8cd707868e19d15e8bb19e7bed470a3f 170 Pfam PF01327 Polypeptide deformylase 5 155 1.2E-50 T 11-10-2018 IPR023635 Peptide deformylase XFC3_10360 8cd707868e19d15e8bb19e7bed470a3f 170 Hamap MF_00163 Peptide deformylase [def]. 2 165 31.011 T 11-10-2018 IPR023635 Peptide deformylase XFC3_10360 8cd707868e19d15e8bb19e7bed470a3f 170 PRINTS PR01576 Peptide deformylase signature 36 65 3.6E-37 T 11-10-2018 IPR023635 Peptide deformylase XFC3_10360 8cd707868e19d15e8bb19e7bed470a3f 170 PRINTS PR01576 Peptide deformylase signature 92 103 3.6E-37 T 11-10-2018 IPR023635 Peptide deformylase XFC3_10360 8cd707868e19d15e8bb19e7bed470a3f 170 PRINTS PR01576 Peptide deformylase signature 104 122 3.6E-37 T 11-10-2018 IPR023635 Peptide deformylase XFC3_10360 8cd707868e19d15e8bb19e7bed470a3f 170 PRINTS PR01576 Peptide deformylase signature 123 152 3.6E-37 T 11-10-2018 IPR023635 Peptide deformylase XFC3_10360 8cd707868e19d15e8bb19e7bed470a3f 170 PIRSF PIRSF004749 1 170 3.9E-56 T 11-10-2018 IPR023635 Peptide deformylase XFC3_10360 8cd707868e19d15e8bb19e7bed470a3f 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 162 1.9E-51 T 11-10-2018 IPR023635 Peptide deformylase XFC3_10360 8cd707868e19d15e8bb19e7bed470a3f 170 SUPERFAMILY SSF56420 2 167 3.93E-62 T 11-10-2018 IPR036821 Peptide deformylase superfamily XFC3_10360 8cd707868e19d15e8bb19e7bed470a3f 170 Gene3D G3DSA:3.90.45.10 1 170 3.9E-61 T 11-10-2018 IPR036821 Peptide deformylase superfamily XFC3_05930 99c4b6d7d33f1ed9b3ca30da25ace8f8 194 Gene3D G3DSA:2.40.128.110 18 185 2.4E-51 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XFC3_05930 99c4b6d7d33f1ed9b3ca30da25ace8f8 194 SMART SM00867 20 184 2.6E-66 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XFC3_05930 99c4b6d7d33f1ed9b3ca30da25ace8f8 194 SUPERFAMILY SSF101874 18 183 8.24E-52 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XFC3_05930 99c4b6d7d33f1ed9b3ca30da25ace8f8 194 Pfam PF04264 YceI-like domain 21 183 4.5E-41 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XFC3_07205 e25147ad1aa1c94b6715595df0454048 304 SUPERFAMILY SSF52402 6 212 1.35E-69 T 11-10-2018 XFC3_07205 e25147ad1aa1c94b6715595df0454048 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 259 3.2E-59 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 XFC3_07205 e25147ad1aa1c94b6715595df0454048 304 Gene3D G3DSA:3.40.50.620 9 214 1.8E-60 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_07205 e25147ad1aa1c94b6715595df0454048 304 PIRSF PIRSF002936 2 304 5.5E-147 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XFC3_07205 e25147ad1aa1c94b6715595df0454048 304 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 6 304 55.226 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XFC3_07205 e25147ad1aa1c94b6715595df0454048 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 11 304 1.7E-149 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XFC3_02470 a089284b025002405a898d7caaeb0cd3 437 Pfam PF00375 Sodium:dicarboxylate symporter family 13 415 6.4E-112 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 XFC3_02470 a089284b025002405a898d7caaeb0cd3 437 SUPERFAMILY SSF118215 12 415 1.26E-100 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XFC3_02470 a089284b025002405a898d7caaeb0cd3 437 Gene3D G3DSA:1.10.3860.10 1 431 5.4E-116 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XFC3_02470 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 1.1E-25 T 11-10-2018 XFC3_02470 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.1E-25 T 11-10-2018 XFC3_02470 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 1.1E-25 T 11-10-2018 XFC3_02470 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 1.1E-25 T 11-10-2018 XFC3_02470 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 1.1E-25 T 11-10-2018 XFC3_02470 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 1.1E-25 T 11-10-2018 XFC3_02470 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 1.1E-25 T 11-10-2018 XFC3_02470 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 1.1E-25 T 11-10-2018 XFC3_08730 cba1fca540f64f165905fb9f0f3e94c5 108 SUPERFAMILY SSF52833 3 107 1.32E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_08730 cba1fca540f64f165905fb9f0f3e94c5 108 Pfam PF00085 Thioredoxin 6 105 3.2E-12 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 XFC3_08730 cba1fca540f64f165905fb9f0f3e94c5 108 Gene3D G3DSA:3.40.30.10 1 108 4.7E-16 T 11-10-2018 XFC3_07180 a30c1db99bf0a6aca523b24a6001a77f 241 SUPERFAMILY SSF54211 5 184 8.6E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_07180 a30c1db99bf0a6aca523b24a6001a77f 241 ProSitePatterns PS01277 Ribonuclease PH signature. 119 132 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site XFC3_07180 a30c1db99bf0a6aca523b24a6001a77f 241 Gene3D G3DSA:3.30.230.70 13 241 4.2E-57 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFC3_07180 a30c1db99bf0a6aca523b24a6001a77f 241 Pfam PF01138 3' exoribonuclease family, domain 1 14 143 7.0E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFC3_07180 a30c1db99bf0a6aca523b24a6001a77f 241 SUPERFAMILY SSF55666 156 240 1.96E-23 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFC3_07180 a30c1db99bf0a6aca523b24a6001a77f 241 Pfam PF03725 3' exoribonuclease family, domain 2 161 226 1.9E-6 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFC3_07180 a30c1db99bf0a6aca523b24a6001a77f 241 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 5 239 6.9E-112 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 XFC3_07180 a30c1db99bf0a6aca523b24a6001a77f 241 Hamap MF_00564 Ribonuclease PH [rph]. 14 240 44.131 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 XFC3_01935 289f7773a1df53d853cf411b15c33f55 379 SUPERFAMILY SSF52821 2 105 9.3E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFC3_01935 289f7773a1df53d853cf411b15c33f55 379 Gene3D G3DSA:3.40.250.10 4 105 1.6E-21 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFC3_01935 289f7773a1df53d853cf411b15c33f55 379 Pfam PF00899 ThiF family 119 356 6.2E-66 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 XFC3_01935 289f7773a1df53d853cf411b15c33f55 379 SMART SM00450 6 102 3.4E-8 T 11-10-2018 IPR001763 Rhodanese-like domain XFC3_01935 289f7773a1df53d853cf411b15c33f55 379 Gene3D G3DSA:3.40.50.720 112 363 2.7E-89 T 11-10-2018 XFC3_01935 289f7773a1df53d853cf411b15c33f55 379 Pfam PF00581 Rhodanese-like domain 7 98 1.9E-7 T 11-10-2018 IPR001763 Rhodanese-like domain XFC3_01935 289f7773a1df53d853cf411b15c33f55 379 SUPERFAMILY SSF69572 107 361 4.32E-89 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 XFC3_00465 718dd7deba04e45324535b0cf6e5ba0c 299 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 199 233 6.5E-11 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_00465 718dd7deba04e45324535b0cf6e5ba0c 299 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 28 296 2.4E-122 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 XFC3_00465 718dd7deba04e45324535b0cf6e5ba0c 299 Gene3D G3DSA:1.10.166.10 25 94 7.5E-21 T 11-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 XFC3_00465 718dd7deba04e45324535b0cf6e5ba0c 299 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 30 93 4.8E-21 T 11-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 XFC3_00465 718dd7deba04e45324535b0cf6e5ba0c 299 SUPERFAMILY SSF51161 27 280 6.79E-65 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFC3_00465 718dd7deba04e45324535b0cf6e5ba0c 299 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 24 296 53.656 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 XFC3_00465 718dd7deba04e45324535b0cf6e5ba0c 299 Gene3D G3DSA:2.160.10.10 111 281 2.1E-53 T 11-10-2018 XFC3_06595 a957c5a98e56a5c2c9e5f52d0255ea7b 399 SMART SM00825 Beta-ketoacyl synthase 4 399 6.2E-9 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XFC3_06595 a957c5a98e56a5c2c9e5f52d0255ea7b 399 Gene3D G3DSA:3.40.47.10 2 244 7.5E-31 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_06595 a957c5a98e56a5c2c9e5f52d0255ea7b 399 Gene3D G3DSA:3.40.47.10 250 393 3.4E-41 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_06595 a957c5a98e56a5c2c9e5f52d0255ea7b 399 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site XFC3_06595 a957c5a98e56a5c2c9e5f52d0255ea7b 399 SUPERFAMILY SSF53901 211 397 4.78E-49 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_06595 a957c5a98e56a5c2c9e5f52d0255ea7b 399 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 248 355 1.4E-26 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XFC3_06595 a957c5a98e56a5c2c9e5f52d0255ea7b 399 SUPERFAMILY SSF53901 1 241 5.17E-35 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_06595 a957c5a98e56a5c2c9e5f52d0255ea7b 399 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 72 239 3.2E-23 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XFC3_05235 8b991b7db0c55bcd0874796d2086894b 349 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 280 4.2E-103 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 XFC3_05235 8b991b7db0c55bcd0874796d2086894b 349 SMART SM00478 38 192 8.7E-42 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XFC3_05235 8b991b7db0c55bcd0874796d2086894b 349 Pfam PF14815 NUDIX domain 236 347 1.2E-20 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 XFC3_05235 8b991b7db0c55bcd0874796d2086894b 349 Gene3D G3DSA:1.10.340.30 20 131 1.7E-79 T 11-10-2018 XFC3_05235 8b991b7db0c55bcd0874796d2086894b 349 Gene3D G3DSA:3.90.79.10 234 349 2.4E-15 T 11-10-2018 XFC3_05235 8b991b7db0c55bcd0874796d2086894b 349 SUPERFAMILY SSF55811 222 348 1.89E-23 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XFC3_05235 8b991b7db0c55bcd0874796d2086894b 349 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 2.0E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XFC3_05235 8b991b7db0c55bcd0874796d2086894b 349 SMART SM00525 193 213 0.0044 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 XFC3_05235 8b991b7db0c55bcd0874796d2086894b 349 Gene3D G3DSA:1.10.1670.10 8 212 1.7E-79 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 XFC3_05235 8b991b7db0c55bcd0874796d2086894b 349 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 194 210 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 XFC3_05235 8b991b7db0c55bcd0874796d2086894b 349 SUPERFAMILY SSF48150 2 226 1.73E-71 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 XFC3_00850 2d70452182e6024548cb0cffaece69d5 199 Pfam PF13489 Methyltransferase domain 30 164 3.1E-8 T 11-10-2018 XFC3_00850 2d70452182e6024548cb0cffaece69d5 199 SUPERFAMILY SSF53335 12 182 3.19E-18 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_00850 2d70452182e6024548cb0cffaece69d5 199 Gene3D G3DSA:3.40.50.150 1 182 5.1E-17 T 11-10-2018 XFC3_09925 02e7e2083fd4e23148cdc164ab4ba580 95 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 19 93 4.4E-14 T 11-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative XFC3_11235 02e7e2083fd4e23148cdc164ab4ba580 95 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 19 93 4.4E-14 T 11-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative XFC3_07525 02e7e2083fd4e23148cdc164ab4ba580 95 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 19 93 4.4E-14 T 11-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative XFC3_01750 4abdb3cd0997ff9c730dcaef5dfbc0e9 181 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 8 151 4.2E-50 T 11-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 XFC3_01750 4abdb3cd0997ff9c730dcaef5dfbc0e9 181 Pfam PF02470 MlaD protein 42 120 7.0E-21 T 11-10-2018 IPR003399 Mce/MlaD XFC3_12010 eaceb479df3fe3cb0aea807d416615ee 361 Gene3D G3DSA:3.30.70.1660 112 343 2.5E-94 T 11-10-2018 XFC3_12010 eaceb479df3fe3cb0aea807d416615ee 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 4.7E-155 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 XFC3_12010 eaceb479df3fe3cb0aea807d416615ee 361 Gene3D G3DSA:3.30.160.20 210 297 2.5E-94 T 11-10-2018 XFC3_12010 eaceb479df3fe3cb0aea807d416615ee 361 Pfam PF00472 RF-1 domain 213 321 1.3E-41 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XFC3_12010 eaceb479df3fe3cb0aea807d416615ee 361 SMART SM00937 63 178 1.7E-63 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 XFC3_12010 eaceb479df3fe3cb0aea807d416615ee 361 Pfam PF03462 PCRF domain 13 203 3.1E-70 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 XFC3_12010 eaceb479df3fe3cb0aea807d416615ee 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 358 39.818 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 XFC3_12010 eaceb479df3fe3cb0aea807d416615ee 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XFC3_12010 eaceb479df3fe3cb0aea807d416615ee 361 SUPERFAMILY SSF75620 12 354 3.14E-129 T 11-10-2018 XFC3_04445 f147f6b128147db53e18ebffebf965b9 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 368 3.1E-78 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XFC3_04445 f147f6b128147db53e18ebffebf965b9 396 Gene3D G3DSA:1.10.287.470 93 166 4.4E-101 T 11-10-2018 XFC3_04445 f147f6b128147db53e18ebffebf965b9 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 288 1.6E-15 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XFC3_04445 f147f6b128147db53e18ebffebf965b9 396 Gene3D G3DSA:2.40.30.170 45 298 4.4E-101 T 11-10-2018 XFC3_04445 f147f6b128147db53e18ebffebf965b9 396 Gene3D G3DSA:2.40.50.100 58 202 4.4E-101 T 11-10-2018 XFC3_04445 f147f6b128147db53e18ebffebf965b9 396 Gene3D G3DSA:2.40.420.20 299 365 4.4E-101 T 11-10-2018 XFC3_04445 f147f6b128147db53e18ebffebf965b9 396 SUPERFAMILY SSF111369 47 292 5.75E-75 T 11-10-2018 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 Gene3D G3DSA:2.30.42.10 294 400 6.7E-25 T 11-10-2018 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 SMART SM00228 299 381 3.5E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 SMART SM00228 418 503 9.9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 SUPERFAMILY SSF50156 257 382 5.39E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 Pfam PF13180 PDZ domain 301 390 8.2E-15 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 55 509 2.6E-157 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 SUPERFAMILY SSF50156 444 510 1.13E-5 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 SUPERFAMILY SSF50494 53 291 6.57E-67 T 11-10-2018 IPR009003 Peptidase S1, PA clan XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 Gene3D G3DSA:2.40.10.120 54 292 7.3E-82 T 11-10-2018 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 Gene3D G3DSA:2.30.42.10 422 513 1.1E-7 T 11-10-2018 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 Pfam PF13365 Trypsin-like peptidase domain 126 260 1.8E-35 T 11-10-2018 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 PRINTS PR00834 HtrA/DegQ protease family signature 196 220 1.1E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 PRINTS PR00834 HtrA/DegQ protease family signature 156 176 1.1E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 PRINTS PR00834 HtrA/DegQ protease family signature 231 248 1.1E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 PRINTS PR00834 HtrA/DegQ protease family signature 135 147 1.1E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 PRINTS PR00834 HtrA/DegQ protease family signature 253 270 1.1E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFC3_03565 d06453fab2e34e93b60d40f35550df56 514 PRINTS PR00834 HtrA/DegQ protease family signature 339 351 1.1E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFC3_08030 88485174d2bb83f26f3faccb35626d19 405 PIRSF PIRSF001413 1 405 4.6E-155 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFC3_08030 88485174d2bb83f26f3faccb35626d19 405 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 12 401 50.149 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFC3_08030 88485174d2bb83f26f3faccb35626d19 405 SUPERFAMILY SSF53686 13 398 2.36E-141 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XFC3_08030 88485174d2bb83f26f3faccb35626d19 405 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 91 105 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFC3_08030 88485174d2bb83f26f3faccb35626d19 405 Gene3D G3DSA:3.40.50.1100 20 216 1.6E-177 T 11-10-2018 XFC3_08030 88485174d2bb83f26f3faccb35626d19 405 Gene3D G3DSA:3.40.50.1100 64 394 1.6E-177 T 11-10-2018 XFC3_08030 88485174d2bb83f26f3faccb35626d19 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 63 388 1.2E-46 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XFC3_08030 88485174d2bb83f26f3faccb35626d19 405 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 17 399 1.5E-182 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFC3_04700 eb49add53b774b6be6f2997b4fb7aa5c 83 SUPERFAMILY SSF47598 2 30 6.52E-5 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XFC3_04700 eb49add53b774b6be6f2997b4fb7aa5c 83 Pfam PF09386 Antitoxin ParD 1 78 4.6E-39 T 11-10-2018 IPR022789 Antitoxin ParD XFC3_04700 eb49add53b774b6be6f2997b4fb7aa5c 83 Gene3D G3DSA:1.10.1220.50 1 83 2.6E-37 T 11-10-2018 XFC3_03440 d2399b1a748930ba9f007e6051caef41 548 Gene3D G3DSA:3.40.50.12780 2 439 2.6E-73 T 11-10-2018 XFC3_03440 d2399b1a748930ba9f007e6051caef41 548 SUPERFAMILY SSF56801 5 507 4.06E-76 T 11-10-2018 XFC3_03440 d2399b1a748930ba9f007e6051caef41 548 Pfam PF00501 AMP-binding enzyme 18 444 1.3E-57 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XFC3_03440 d2399b1a748930ba9f007e6051caef41 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 11-10-2018 IPR020845 AMP-binding, conserved site XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 160 9.2E-49 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 1.8E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 1.8E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 1.8E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 1.8E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 1.8E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 1.8E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 Gene3D G3DSA:1.10.1040.10 192 340 1.7E-46 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 Gene3D G3DSA:3.40.50.720 1 190 1.5E-52 T 11-10-2018 XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 320 1.5E-46 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 SUPERFAMILY SSF48179 182 337 5.1E-51 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 325 38.364 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 SUPERFAMILY SSF51735 7 181 5.35E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFC3_06110 b853a0efba2c461102804cbf4bcbb3f1 346 PIRSF PIRSF000114 1 335 3.6E-94 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFC3_00750 54c312042d1349efe8950513a71a08e5 214 Pfam PF03006 Haemolysin-III related 13 206 3.4E-37 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 XFC3_00750 54c312042d1349efe8950513a71a08e5 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 211 3.2E-61 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 XFC3_02090 eb00d40f3a942897c6f19b67ee60771d 140 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 79 3.0E-30 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 XFC3_02090 eb00d40f3a942897c6f19b67ee60771d 140 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 9.2E-21 T 11-10-2018 XFC3_02090 eb00d40f3a942897c6f19b67ee60771d 140 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 9.2E-21 T 11-10-2018 XFC3_02090 eb00d40f3a942897c6f19b67ee60771d 140 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 9.2E-21 T 11-10-2018 XFC3_02090 eb00d40f3a942897c6f19b67ee60771d 140 Pfam PF02416 mttA/Hcf106 family 4 37 8.0E-7 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 XFC3_02090 eb00d40f3a942897c6f19b67ee60771d 140 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 137 18.06 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 XFC3_01715 5a26d429c91016b2f88aabcad01d728e 584 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 262 4.6E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFC3_01715 5a26d429c91016b2f88aabcad01d728e 584 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 398 566 1.8E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFC3_01715 5a26d429c91016b2f88aabcad01d728e 584 SUPERFAMILY SSF161098 376 569 7.46E-20 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_01715 5a26d429c91016b2f88aabcad01d728e 584 Gene3D G3DSA:1.10.3720.10 368 573 2.6E-18 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_01715 5a26d429c91016b2f88aabcad01d728e 584 Gene3D G3DSA:1.10.3720.10 69 269 6.0E-24 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_01715 5a26d429c91016b2f88aabcad01d728e 584 SUPERFAMILY SSF161098 71 264 2.22E-20 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_02005 2b198b5166bbb959f8811e401ab547a2 186 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 9.4E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_02005 2b198b5166bbb959f8811e401ab547a2 186 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.8E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_02005 2b198b5166bbb959f8811e401ab547a2 186 Pfam PF00114 Pilin (bacterial filament) 35 175 9.0E-22 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XFC3_02005 2b198b5166bbb959f8811e401ab547a2 186 SUPERFAMILY SSF54523 7 178 5.23E-23 T 11-10-2018 XFC3_02005 2b198b5166bbb959f8811e401ab547a2 186 Gene3D G3DSA:3.30.700.10 7 176 1.4E-21 T 11-10-2018 XFC3_04255 3992e134b0f520e96a31221728698f00 572 Pfam PF00999 Sodium/hydrogen exchanger family 12 395 6.2E-83 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 XFC3_04255 3992e134b0f520e96a31221728698f00 572 SUPERFAMILY SSF51735 426 557 4.04E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_04255 3992e134b0f520e96a31221728698f00 572 Gene3D G3DSA:1.20.1530.20 5 409 3.7E-80 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily XFC3_04255 3992e134b0f520e96a31221728698f00 572 Gene3D G3DSA:3.40.50.720 425 568 5.0E-30 T 11-10-2018 XFC3_04255 3992e134b0f520e96a31221728698f00 572 Pfam PF02254 TrkA-N domain 429 542 6.4E-22 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 XFC3_10640 60c4bf80a44718c3d026b4201573a8a1 261 Pfam PF03180 NLPA lipoprotein 26 261 3.1E-99 T 11-10-2018 IPR004872 Lipoprotein NlpA family XFC3_10640 60c4bf80a44718c3d026b4201573a8a1 261 PIRSF PIRSF002854 2 261 7.8E-102 T 11-10-2018 IPR004872 Lipoprotein NlpA family XFC3_10640 60c4bf80a44718c3d026b4201573a8a1 261 Gene3D G3DSA:3.40.190.10 26 257 3.8E-97 T 11-10-2018 XFC3_10640 60c4bf80a44718c3d026b4201573a8a1 261 SUPERFAMILY SSF53850 26 261 4.56E-81 T 11-10-2018 XFC3_10640 60c4bf80a44718c3d026b4201573a8a1 261 Gene3D G3DSA:3.40.190.10 107 211 3.8E-97 T 11-10-2018 XFC3_10450 e5e3a64ab996eb527c410a2f74d77dca 497 Pfam PF04055 Radical SAM superfamily 196 380 5.0E-26 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XFC3_10450 e5e3a64ab996eb527c410a2f74d77dca 497 SUPERFAMILY SSF102114 167 425 1.31E-58 T 11-10-2018 XFC3_10450 e5e3a64ab996eb527c410a2f74d77dca 497 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 49 494 2.8E-177 T 11-10-2018 XFC3_10450 e5e3a64ab996eb527c410a2f74d77dca 497 Gene3D G3DSA:3.40.50.12160 49 183 1.4E-32 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily XFC3_10450 e5e3a64ab996eb527c410a2f74d77dca 497 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 49 492 7.5E-144 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 XFC3_10450 e5e3a64ab996eb527c410a2f74d77dca 497 Pfam PF00919 Uncharacterized protein family UPF0004 49 149 2.6E-28 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 XFC3_10450 e5e3a64ab996eb527c410a2f74d77dca 497 SMART SM00729 192 418 5.4E-54 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XFC3_10450 e5e3a64ab996eb527c410a2f74d77dca 497 Gene3D G3DSA:3.80.30.20 190 436 6.4E-79 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe XFC3_10450 e5e3a64ab996eb527c410a2f74d77dca 497 Pfam PF01938 TRAM domain 433 494 1.2E-18 T 11-10-2018 IPR002792 TRAM domain XFC3_10450 e5e3a64ab996eb527c410a2f74d77dca 497 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 48 495 71.054 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 XFC3_10450 e5e3a64ab996eb527c410a2f74d77dca 497 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 196 216 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 XFC3_10700 e9fe3cde9cd1cabb944a652784022556 242 SUPERFAMILY SSF51261 47 239 1.99E-40 T 11-10-2018 IPR011055 Duplicated hybrid motif XFC3_10700 e9fe3cde9cd1cabb944a652784022556 242 Gene3D G3DSA:3.10.350.10 31 102 1.2E-15 T 11-10-2018 IPR036779 LysM domain superfamily XFC3_10700 e9fe3cde9cd1cabb944a652784022556 242 Pfam PF01476 LysM domain 48 88 2.8E-13 T 11-10-2018 IPR018392 LysM domain XFC3_10700 e9fe3cde9cd1cabb944a652784022556 242 Pfam PF01551 Peptidase family M23 148 235 6.2E-23 T 11-10-2018 IPR016047 Peptidase M23 XFC3_10700 e9fe3cde9cd1cabb944a652784022556 242 Gene3D G3DSA:2.70.70.10 115 240 5.6E-28 T 11-10-2018 IPR011055 Duplicated hybrid motif XFC3_10700 e9fe3cde9cd1cabb944a652784022556 242 SMART SM00257 46 90 6.9E-12 T 11-10-2018 IPR018392 LysM domain XFC3_03835 520f20d7ecf91cbb619a25c480cd0c49 131 SUPERFAMILY SSF160472 1 123 1.06E-34 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_03835 520f20d7ecf91cbb619a25c480cd0c49 131 Pfam PF04591 Protein of unknown function, DUF596 56 130 1.5E-23 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFC3_03835 520f20d7ecf91cbb619a25c480cd0c49 131 Gene3D G3DSA:1.10.3510.10 3 128 5.9E-14 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_11390 48ef8516949a82a8eda9563684090da3 66 SUPERFAMILY SSF47413 1 59 9.0E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_11390 48ef8516949a82a8eda9563684090da3 66 Gene3D G3DSA:1.10.260.40 2 66 1.6E-10 T 11-10-2018 XFC3_00525 95457c19f0a96c81c1be45831f4ddb61 368 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 35 321 1.0E-44 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XFC3_00525 95457c19f0a96c81c1be45831f4ddb61 368 Gene3D G3DSA:3.40.50.1100 36 327 3.7E-65 T 11-10-2018 XFC3_00525 95457c19f0a96c81c1be45831f4ddb61 368 Gene3D G3DSA:3.40.50.1100 50 156 3.7E-65 T 11-10-2018 XFC3_00525 95457c19f0a96c81c1be45831f4ddb61 368 SUPERFAMILY SSF53686 3 340 1.83E-65 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XFC3_01725 14c748ced2201f40185e200b0fdec180 456 SUPERFAMILY SSF58113 36 186 1.83E-5 T 11-10-2018 XFC3_01725 14c748ced2201f40185e200b0fdec180 456 Gene3D G3DSA:1.20.120.20 44 201 2.3E-6 T 11-10-2018 XFC3_01725 14c748ced2201f40185e200b0fdec180 456 Pfam PF02646 RmuC family 144 434 1.2E-74 T 11-10-2018 IPR003798 DNA recombination RmuC XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 Gene3D G3DSA:2.40.37.10 12 559 1.3E-212 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 Gene3D G3DSA:3.20.20.10 65 344 1.3E-212 T 11-10-2018 IPR029066 PLP-binding barrel XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 SUPERFAMILY SSF51419 64 341 1.5E-61 T 11-10-2018 IPR029066 PLP-binding barrel XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PRINTS PR01180 Arginine decarboxylase signature 534 555 1.7E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PRINTS PR01180 Arginine decarboxylase signature 88 102 1.7E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PRINTS PR01180 Arginine decarboxylase signature 481 506 1.7E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PRINTS PR01180 Arginine decarboxylase signature 192 214 1.7E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PRINTS PR01180 Arginine decarboxylase signature 319 336 1.7E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PRINTS PR01180 Arginine decarboxylase signature 456 477 1.7E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PRINTS PR01180 Arginine decarboxylase signature 64 79 1.7E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PRINTS PR01180 Arginine decarboxylase signature 142 157 1.7E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PRINTS PR01180 Arginine decarboxylase signature 168 189 1.7E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 270 286 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 1 624 40.896 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PIRSF PIRSF001336 1 625 4.8E-239 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 Gene3D G3DSA:1.20.58.930 361 452 1.3E-212 T 11-10-2018 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 74 339 1.2E-44 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 SUPERFAMILY SSF50621 449 560 3.77E-6 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 329 348 5.3E-15 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 96 114 5.3E-15 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 235 248 5.3E-15 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 534 547 5.3E-15 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 119 131 5.3E-15 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFC3_00600 bd9d3dc1787d7a0f91211102fabdc1c8 628 TIGRFAM TIGR01273 speA: arginine decarboxylase 3 623 1.9E-268 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFC3_08285 bbb11d15ea6495ca578328add2037ec5 687 Gene3D G3DSA:3.90.1310.10 67 245 3.0E-43 T 11-10-2018 XFC3_08285 bbb11d15ea6495ca578328add2037ec5 687 Gene3D G3DSA:3.30.1390.30 86 161 3.0E-43 T 11-10-2018 XFC3_08285 bbb11d15ea6495ca578328add2037ec5 687 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 612 46.192 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFC3_08285 bbb11d15ea6495ca578328add2037ec5 687 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 234 9.5E-42 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 XFC3_08285 bbb11d15ea6495ca578328add2037ec5 687 SUPERFAMILY SSF56519 58 249 1.26E-46 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 XFC3_08285 bbb11d15ea6495ca578328add2037ec5 687 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 608 5.6E-211 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFC3_08285 bbb11d15ea6495ca578328add2037ec5 687 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 605 3.1E-67 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XFC3_08285 bbb11d15ea6495ca578328add2037ec5 687 SUPERFAMILY SSF56601 250 608 3.42E-94 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFC3_08285 bbb11d15ea6495ca578328add2037ec5 687 Gene3D G3DSA:3.40.710.10 249 610 3.8E-92 T 11-10-2018 XFC3_08540 288f0168801ffd2bd3072f63115fedac 293 Pfam PF00491 Arginase family 67 223 1.2E-13 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 XFC3_08540 288f0168801ffd2bd3072f63115fedac 293 Gene3D G3DSA:3.40.800.10 28 286 3.3E-28 T 11-10-2018 XFC3_08540 288f0168801ffd2bd3072f63115fedac 293 SUPERFAMILY SSF52768 8 284 1.46E-39 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily XFC3_11165 e6053cb30386909aa345a2496dccf05e 118 SMART SM00422 19 89 2.3E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XFC3_11165 e6053cb30386909aa345a2496dccf05e 118 SUPERFAMILY SSF46955 17 114 5.04E-17 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFC3_11165 e6053cb30386909aa345a2496dccf05e 118 Pfam PF13411 MerR HTH family regulatory protein 19 87 1.0E-21 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XFC3_11165 e6053cb30386909aa345a2496dccf05e 118 Gene3D G3DSA:1.10.1660.10 13 88 9.8E-21 T 11-10-2018 XFC3_07855 7cfd9071227e2f7b7ac8e8384d0e0936 425 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 424 44.832 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_07855 7cfd9071227e2f7b7ac8e8384d0e0936 425 SUPERFAMILY SSF55205 1 424 7.85E-139 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 XFC3_07855 7cfd9071227e2f7b7ac8e8384d0e0936 425 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 423 1.3E-173 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_07855 7cfd9071227e2f7b7ac8e8384d0e0936 425 Gene3D G3DSA:3.65.10.10 21 236 3.7E-166 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XFC3_07855 7cfd9071227e2f7b7ac8e8384d0e0936 425 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 414 1.9E-108 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 XFC3_07855 7cfd9071227e2f7b7ac8e8384d0e0936 425 Gene3D G3DSA:3.65.10.10 6 421 3.7E-166 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XFC3_01590 06152c2e9ac27398873c66b325d99125 402 Pfam PF00067 Cytochrome P450 82 368 6.0E-31 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 XFC3_01590 06152c2e9ac27398873c66b325d99125 402 Gene3D G3DSA:1.10.630.10 1 402 2.2E-116 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 XFC3_01590 06152c2e9ac27398873c66b325d99125 402 SUPERFAMILY SSF48264 9 399 3.14E-90 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 XFC3_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 290 317 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 273 284 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 348 359 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 85 96 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 131 147 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 318 333 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 339 348 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 192 214 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFC3_01590 06152c2e9ac27398873c66b325d99125 402 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 341 350 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 XFC3_00620 e92ac4ce5bcb5ca0fd371e10f64091e4 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site XFC3_00620 e92ac4ce5bcb5ca0fd371e10f64091e4 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 5.5E-66 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 XFC3_00620 e92ac4ce5bcb5ca0fd371e10f64091e4 224 SUPERFAMILY SSF47781 16 89 1.11E-8 T 11-10-2018 IPR010994 RuvA domain 2-like XFC3_00620 e92ac4ce5bcb5ca0fd371e10f64091e4 224 Gene3D G3DSA:3.40.140.10 101 224 3.1E-40 T 11-10-2018 XFC3_00620 e92ac4ce5bcb5ca0fd371e10f64091e4 224 Pfam PF04002 RadC-like JAB domain 104 222 1.6E-41 T 11-10-2018 IPR025657 RadC-like JAB domain XFC3_11925 067c106d05ceb1dd022fa88bb4f6c678 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 9.0E-65 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11925 067c106d05ceb1dd022fa88bb4f6c678 142 SUPERFAMILY SSF54747 3 73 1.01E-29 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily XFC3_11925 067c106d05ceb1dd022fa88bb4f6c678 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.1E-22 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 XFC3_11925 067c106d05ceb1dd022fa88bb4f6c678 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_11925 067c106d05ceb1dd022fa88bb4f6c678 142 SMART SM00649 9 141 7.5E-83 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 XFC3_11925 067c106d05ceb1dd022fa88bb4f6c678 142 Gene3D G3DSA:3.30.1550.10 2 72 1.4E-34 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily XFC3_11925 067c106d05ceb1dd022fa88bb4f6c678 142 SUPERFAMILY SSF46906 68 141 2.75E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily XFC3_11925 067c106d05ceb1dd022fa88bb4f6c678 142 Gene3D G3DSA:1.10.10.250 73 141 1.2E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily XFC3_11925 067c106d05ceb1dd022fa88bb4f6c678 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 7.0E-17 T 11-10-2018 XFC3_11925 067c106d05ceb1dd022fa88bb4f6c678 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.032 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 XFC3_11925 067c106d05ceb1dd022fa88bb4f6c678 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 2.2E-29 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal XFC3_01000 5573ec305253c0a8ac8e8f0a0f964b99 199 SUPERFAMILY SSF75420 7 89 1.44E-19 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily XFC3_01000 5573ec305253c0a8ac8e8f0a0f964b99 199 Pfam PF17384 RimP C-terminal SH3 domain 92 159 3.5E-19 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal XFC3_01000 5573ec305253c0a8ac8e8f0a0f964b99 199 SUPERFAMILY SSF74942 90 159 4.58E-11 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily XFC3_01000 5573ec305253c0a8ac8e8f0a0f964b99 199 Pfam PF02576 RimP N-terminal domain 11 89 1.2E-25 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal XFC3_01000 5573ec305253c0a8ac8e8f0a0f964b99 199 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 159 21.767 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 XFC3_01000 5573ec305253c0a8ac8e8f0a0f964b99 199 Gene3D G3DSA:3.30.300.70 4 86 1.1E-17 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily XFC3_07560 5d4379a9b3136801a8988c840421b0b0 183 Gene3D G3DSA:3.60.20.10 8 183 1.6E-63 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFC3_07560 5d4379a9b3136801a8988c840421b0b0 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 13 183 3.9E-81 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 XFC3_07560 5d4379a9b3136801a8988c840421b0b0 183 SUPERFAMILY SSF56235 9 180 4.27E-54 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFC3_07560 5d4379a9b3136801a8988c840421b0b0 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 12 183 40.675 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 XFC3_07560 5d4379a9b3136801a8988c840421b0b0 183 Pfam PF00227 Proteasome subunit 9 180 6.0E-22 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 XFC3_07560 5d4379a9b3136801a8988c840421b0b0 183 PIRSF PIRSF039093 6 183 4.5E-82 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 XFC3_12005 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Gene3D G3DSA:3.30.460.30 1 150 2.0E-50 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFC3_12005 586ba43ac5c55f14ef4b6cb6abc0fba1 432 PIRSF PIRSF000445 1 421 2.1E-146 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFC3_12005 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 410 29.037 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFC3_12005 586ba43ac5c55f14ef4b6cb6abc0fba1 432 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 91 114 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFC3_12005 586ba43ac5c55f14ef4b6cb6abc0fba1 432 SUPERFAMILY SSF69075 309 409 4.18E-24 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFC3_12005 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 313 407 1.3E-19 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFC3_12005 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Gene3D G3DSA:3.40.50.720 154 305 2.9E-41 T 11-10-2018 XFC3_12005 586ba43ac5c55f14ef4b6cb6abc0fba1 432 SUPERFAMILY SSF69742 1 150 1.44E-45 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFC3_12005 586ba43ac5c55f14ef4b6cb6abc0fba1 432 SUPERFAMILY SSF51735 154 307 1.99E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_12005 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 148 5.1E-46 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFC3_12005 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 164 297 2.8E-45 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase XFC3_12005 586ba43ac5c55f14ef4b6cb6abc0fba1 432 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 407 4.1E-121 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFC3_06410 5f2de8c3d7f44505351477dc47c6ea21 349 SMART SM00829 13 342 1.5E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XFC3_06410 5f2de8c3d7f44505351477dc47c6ea21 349 Gene3D G3DSA:3.40.50.720 159 314 2.6E-132 T 11-10-2018 XFC3_06410 5f2de8c3d7f44505351477dc47c6ea21 349 Pfam PF00107 Zinc-binding dehydrogenase 185 308 2.2E-23 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XFC3_06410 5f2de8c3d7f44505351477dc47c6ea21 349 SUPERFAMILY SSF50129 5 171 8.65E-48 T 11-10-2018 IPR011032 GroES-like superfamily XFC3_06410 5f2de8c3d7f44505351477dc47c6ea21 349 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 178 205 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XFC3_06410 5f2de8c3d7f44505351477dc47c6ea21 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 142 1.1E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XFC3_06410 5f2de8c3d7f44505351477dc47c6ea21 349 Gene3D G3DSA:3.90.180.10 12 342 2.6E-132 T 11-10-2018 XFC3_06410 5f2de8c3d7f44505351477dc47c6ea21 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XFC3_06410 5f2de8c3d7f44505351477dc47c6ea21 349 SUPERFAMILY SSF51735 151 312 9.01E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_06010 3dbe9ffa1e6b324a3b839d4e42609504 583 SUPERFAMILY SSF52518 8 178 1.13E-59 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFC3_06010 3dbe9ffa1e6b324a3b839d4e42609504 583 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 568 1.4E-207 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 XFC3_06010 3dbe9ffa1e6b324a3b839d4e42609504 583 Gene3D G3DSA:3.40.50.970 367 579 1.5E-65 T 11-10-2018 XFC3_06010 3dbe9ffa1e6b324a3b839d4e42609504 583 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 332 3.7E-41 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 XFC3_06010 3dbe9ffa1e6b324a3b839d4e42609504 583 SUPERFAMILY SSF52467 193 362 1.11E-53 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily XFC3_06010 3dbe9ffa1e6b324a3b839d4e42609504 583 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 544 1.6E-47 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 XFC3_06010 3dbe9ffa1e6b324a3b839d4e42609504 583 Gene3D G3DSA:3.40.50.1220 191 363 3.8E-50 T 11-10-2018 XFC3_06010 3dbe9ffa1e6b324a3b839d4e42609504 583 Gene3D G3DSA:3.40.50.970 2 185 5.1E-68 T 11-10-2018 XFC3_06010 3dbe9ffa1e6b324a3b839d4e42609504 583 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 XFC3_06010 3dbe9ffa1e6b324a3b839d4e42609504 583 SUPERFAMILY SSF52518 377 573 8.94E-64 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFC3_06010 3dbe9ffa1e6b324a3b839d4e42609504 583 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 175 4.0E-57 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 XFC3_09095 765e94794ac8667d111b85f50afedef5 468 SUPERFAMILY SSF53623 118 303 5.27E-41 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFC3_09095 765e94794ac8667d111b85f50afedef5 468 Gene3D G3DSA:3.40.50.720 5 97 2.4E-5 T 11-10-2018 XFC3_09095 765e94794ac8667d111b85f50afedef5 468 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 450 5.8E-81 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XFC3_09095 765e94794ac8667d111b85f50afedef5 468 SUPERFAMILY SSF53244 310 450 6.41E-26 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFC3_09095 765e94794ac8667d111b85f50afedef5 468 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 455 25.943 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XFC3_09095 765e94794ac8667d111b85f50afedef5 468 Gene3D G3DSA:3.40.1190.10 115 311 3.2E-41 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFC3_09095 765e94794ac8667d111b85f50afedef5 468 Pfam PF08245 Mur ligase middle domain 120 289 2.7E-24 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XFC3_09095 765e94794ac8667d111b85f50afedef5 468 Gene3D G3DSA:3.90.190.20 312 452 3.4E-28 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFC3_05565 b2aafcc9ed9589e481c35b307e264909 387 Gene3D G3DSA:3.90.1340.10 133 191 1.1E-5 T 11-10-2018 IPR037053 Phage tail collar domain superfamily XFC3_05565 b2aafcc9ed9589e481c35b307e264909 387 SUPERFAMILY SSF88874 132 279 1.31E-15 T 11-10-2018 XFC3_05565 b2aafcc9ed9589e481c35b307e264909 387 Pfam PF07484 Phage Tail Collar Domain 139 191 2.6E-12 T 11-10-2018 IPR011083 Phage tail collar domain XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 201 2.6E-76 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 Pfam PF00117 Glutamine amidotransferase class-I 12 197 3.7E-40 T 11-10-2018 IPR017926 Glutamine amidotransferase XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 Pfam PF00958 GMP synthase C terminal domain 430 521 6.6E-43 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 Gene3D G3DSA:3.30.300.10 403 522 1.4E-50 T 11-10-2018 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 SUPERFAMILY SSF52317 9 205 7.37E-56 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 Gene3D G3DSA:3.40.50.620 207 402 3.4E-72 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 1.7E-5 T 11-10-2018 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 1.7E-5 T 11-10-2018 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 1.7E-5 T 11-10-2018 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 SUPERFAMILY SSF52402 191 443 7.06E-57 T 11-10-2018 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.6E-7 T 11-10-2018 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 1.6E-7 T 11-10-2018 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.6E-7 T 11-10-2018 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 522 55.009 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 SUPERFAMILY SSF54810 402 522 2.48E-49 T 11-10-2018 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 522 1.7E-145 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 Pfam PF02540 NAD synthase 211 291 7.1E-9 T 11-10-2018 IPR022310 NAD/GMP synthase XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.9E-6 T 11-10-2018 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00097 Anthranilate synthase component II signature 174 187 1.9E-6 T 11-10-2018 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.9E-6 T 11-10-2018 XFC3_02805 b7a63836665432f6c1f6a6d850c4fd76 522 Gene3D G3DSA:3.40.50.880 6 206 2.0E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_02895 68378d56447193457ad3f611d5e1297c 1192 Pfam PF13091 PLD-like domain 1042 1176 1.4E-11 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XFC3_02895 68378d56447193457ad3f611d5e1297c 1192 Pfam PF13086 AAA domain 270 365 7.4E-8 T 11-10-2018 XFC3_02895 68378d56447193457ad3f611d5e1297c 1192 Gene3D G3DSA:3.30.870.10 1014 1181 7.2E-20 T 11-10-2018 XFC3_02895 68378d56447193457ad3f611d5e1297c 1192 SUPERFAMILY SSF52540 266 981 3.0E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02895 68378d56447193457ad3f611d5e1297c 1192 Gene3D G3DSA:3.40.50.300 552 771 5.7E-6 T 11-10-2018 XFC3_02895 68378d56447193457ad3f611d5e1297c 1192 Gene3D G3DSA:3.40.50.300 804 1005 1.9E-32 T 11-10-2018 XFC3_02895 68378d56447193457ad3f611d5e1297c 1192 Pfam PF13087 AAA domain 794 984 2.3E-24 T 11-10-2018 XFC3_02895 68378d56447193457ad3f611d5e1297c 1192 PIRSF PIRSF026306 1 1185 0.0 T 11-10-2018 IPR016834 Uncharacterised conserved protein UCP026306 XFC3_02895 68378d56447193457ad3f611d5e1297c 1192 SUPERFAMILY SSF56024 1014 1180 3.45E-18 T 11-10-2018 XFC3_04320 df8e914327754fc7817184dd03e97a69 499 Pfam PF05272 Virulence-associated protein E 135 334 3.3E-82 T 11-10-2018 IPR007936 Virulence-associated E XFC3_09795 df698a5a7ca145dc256ab2eeeafb390c 199 Pfam PF02498 BRO family, N-terminal domain 15 102 2.7E-26 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_09795 df698a5a7ca145dc256ab2eeeafb390c 199 SMART SM01040 14 102 3.1E-37 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_03830 a3d3821b74633de305c2583575057e55 453 Pfam PF04830 Possible hemagglutinin (DUF637) 2 56 8.5E-7 T 11-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative XFC3_03830 a3d3821b74633de305c2583575057e55 453 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 217 400 1.3E-8 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFC3_12540 a3d3821b74633de305c2583575057e55 453 Pfam PF04830 Possible hemagglutinin (DUF637) 2 56 8.5E-7 T 11-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative XFC3_12540 a3d3821b74633de305c2583575057e55 453 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 217 400 1.3E-8 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFC3_00680 cca3fd3336a6fbbb3ce070a0060c6819 509 Pfam PF13000 Acetyl-coenzyme A transporter 1 22 107 6.4E-10 T 11-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 XFC3_00680 cca3fd3336a6fbbb3ce070a0060c6819 509 Gene3D G3DSA:1.20.1250.20 17 207 3.9E-8 T 11-10-2018 XFC3_00680 cca3fd3336a6fbbb3ce070a0060c6819 509 SUPERFAMILY SSF103473 18 500 8.2E-22 T 11-10-2018 IPR036259 MFS transporter superfamily XFC3_00680 cca3fd3336a6fbbb3ce070a0060c6819 509 Gene3D G3DSA:1.20.1250.20 284 501 1.6E-7 T 11-10-2018 XFC3_08290 d71552d154a434e002dda6c16a452468 161 PIRSF PIRSF018472 1 160 2.0E-46 T 11-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type XFC3_08290 d71552d154a434e002dda6c16a452468 161 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 6 151 5.4E-29 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 XFC3_08290 d71552d154a434e002dda6c16a452468 161 Pfam PF04093 rod shape-determining protein MreD 3 152 1.2E-39 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 XFC3_04200 71a6ac056c1099ca9cbd534f0c69eaca 249 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 40 241 7.7E-75 T 11-10-2018 XFC3_04200 71a6ac056c1099ca9cbd534f0c69eaca 249 Gene3D G3DSA:1.10.510.10 148 246 6.1E-11 T 11-10-2018 XFC3_04200 71a6ac056c1099ca9cbd534f0c69eaca 249 SUPERFAMILY SSF56112 46 219 2.29E-19 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily XFC3_04200 71a6ac056c1099ca9cbd534f0c69eaca 249 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 10 243 39.203 T 11-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 XFC3_02040 c4fea6139db419f4a778e8f57b1b0b29 1040 SUPERFAMILY SSF56935 60 1039 2.56E-62 T 11-10-2018 XFC3_02040 c4fea6139db419f4a778e8f57b1b0b29 1040 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 194 9.5E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFC3_02040 c4fea6139db419f4a778e8f57b1b0b29 1040 Pfam PF00593 TonB dependent receptor 467 1038 1.2E-28 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFC3_02040 c4fea6139db419f4a778e8f57b1b0b29 1040 Gene3D G3DSA:2.170.130.10 53 198 3.2E-25 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFC3_02055 b1e69d004e4c467ae25cb12ec304683a 121 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 4 116 1.4E-31 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 XFC3_02055 b1e69d004e4c467ae25cb12ec304683a 121 Gene3D G3DSA:3.40.1350.10 10 121 7.7E-28 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XFC3_02055 b1e69d004e4c467ae25cb12ec304683a 121 Pfam PF02021 Uncharacterised protein family UPF0102 12 100 2.4E-22 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 XFC3_02055 b1e69d004e4c467ae25cb12ec304683a 121 SUPERFAMILY SSF52980 6 110 1.29E-13 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XFC3_02055 b1e69d004e4c467ae25cb12ec304683a 121 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 115 21.466 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 XFC3_06750 d2d9788106ae29a9c81e53f40d3faffc 291 SUPERFAMILY SSF52540 6 227 2.37E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_06750 d2d9788106ae29a9c81e53f40d3faffc 291 SMART SM00382 34 212 2.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_06750 d2d9788106ae29a9c81e53f40d3faffc 291 Gene3D G3DSA:3.40.50.300 2 237 1.1E-40 T 11-10-2018 XFC3_06750 d2d9788106ae29a9c81e53f40d3faffc 291 Pfam PF00005 ABC transporter 26 162 1.1E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_00980 85d83dc103d089a72f8ef61e665d2398 126 PIRSF PIRSF006246 1 125 5.1E-47 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XFC3_00980 85d83dc103d089a72f8ef61e665d2398 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 67.486 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XFC3_00980 85d83dc103d089a72f8ef61e665d2398 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 122 4.0E-64 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XFC3_00980 85d83dc103d089a72f8ef61e665d2398 126 Gene3D G3DSA:2.40.40.20 1 126 3.5E-53 T 11-10-2018 XFC3_00980 85d83dc103d089a72f8ef61e665d2398 126 SUPERFAMILY SSF50692 1 121 1.09E-45 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily XFC3_00980 85d83dc103d089a72f8ef61e665d2398 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 2.4E-48 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XFC3_00980 85d83dc103d089a72f8ef61e665d2398 126 Pfam PF02261 Aspartate decarboxylase 1 114 3.9E-47 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XFC3_02690 e5db917b1852d37233ffba5f7968c1ba 476 SUPERFAMILY SSF55120 86 263 1.06E-37 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_02690 e5db917b1852d37233ffba5f7968c1ba 476 SMART SM00363 27 85 9.8E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_02690 e5db917b1852d37233ffba5f7968c1ba 476 Gene3D G3DSA:3.30.70.1560 152 247 8.6E-47 T 11-10-2018 XFC3_02690 e5db917b1852d37233ffba5f7968c1ba 476 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 128 142 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 XFC3_02690 e5db917b1852d37233ffba5f7968c1ba 476 Pfam PF00849 RNA pseudouridylate synthase 90 225 6.1E-16 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_02690 e5db917b1852d37233ffba5f7968c1ba 476 Gene3D G3DSA:3.10.290.10 23 79 4.2E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XFC3_02690 e5db917b1852d37233ffba5f7968c1ba 476 SUPERFAMILY SSF55174 25 113 4.56E-17 T 11-10-2018 XFC3_02690 e5db917b1852d37233ffba5f7968c1ba 476 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 94 258 1.5E-50 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 XFC3_02690 e5db917b1852d37233ffba5f7968c1ba 476 Pfam PF01479 S4 domain 27 72 5.3E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_02690 e5db917b1852d37233ffba5f7968c1ba 476 Gene3D G3DSA:3.30.70.580 92 254 8.6E-47 T 11-10-2018 XFC3_08795 fad06228d1bb1dbe01099c9bf8927476 431 Gene3D G3DSA:3.30.70.1050 1 111 3.2E-29 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 XFC3_08795 fad06228d1bb1dbe01099c9bf8927476 431 Gene3D G3DSA:3.10.50.40 147 243 2.2E-62 T 11-10-2018 XFC3_08795 fad06228d1bb1dbe01099c9bf8927476 431 Gene3D G3DSA:1.10.3120.10 112 417 2.2E-62 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 XFC3_08795 fad06228d1bb1dbe01099c9bf8927476 431 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 260 413 4.2E-34 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 XFC3_08795 fad06228d1bb1dbe01099c9bf8927476 431 Hamap MF_00303 Trigger factor [tig]. 1 420 16.918 T 11-10-2018 IPR005215 Trigger factor GO:0015031 XFC3_08795 fad06228d1bb1dbe01099c9bf8927476 431 Pfam PF05697 Bacterial trigger factor protein (TF) 1 141 3.4E-32 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 XFC3_08795 fad06228d1bb1dbe01099c9bf8927476 431 SUPERFAMILY SSF109998 245 429 4.51E-34 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily XFC3_08795 fad06228d1bb1dbe01099c9bf8927476 431 TIGRFAM TIGR00115 tig: trigger factor 11 412 3.1E-96 T 11-10-2018 IPR005215 Trigger factor GO:0015031 XFC3_08795 fad06228d1bb1dbe01099c9bf8927476 431 SUPERFAMILY SSF102735 1 124 1.83E-28 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 XFC3_08795 fad06228d1bb1dbe01099c9bf8927476 431 SUPERFAMILY SSF54534 129 242 3.93E-14 T 11-10-2018 XFC3_08795 fad06228d1bb1dbe01099c9bf8927476 431 PIRSF PIRSF003095 1 431 6.7E-102 T 11-10-2018 IPR005215 Trigger factor GO:0015031 XFC3_06245 85f38e5a19c7a1f918a975f6ca740475 117 Gene3D G3DSA:3.40.50.150 11 116 6.1E-25 T 11-10-2018 XFC3_06245 85f38e5a19c7a1f918a975f6ca740475 117 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 83 95 - T 11-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 XFC3_06245 85f38e5a19c7a1f918a975f6ca740475 117 Pfam PF00145 C-5 cytosine-specific DNA methylase 21 114 4.9E-18 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 XFC3_06245 85f38e5a19c7a1f918a975f6ca740475 117 SUPERFAMILY SSF53335 19 115 1.33E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_04080 13ddf6b7840d9b1462b63203f53fa36d 472 Gene3D G3DSA:3.30.420.280 271 462 6.8E-57 T 11-10-2018 XFC3_04080 13ddf6b7840d9b1462b63203f53fa36d 472 Pfam PF17289 Terminase RNaseH-like domain 300 451 1.6E-22 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like XFC3_04080 13ddf6b7840d9b1462b63203f53fa36d 472 Pfam PF03237 Terminase-like family 58 283 8.2E-32 T 11-10-2018 IPR004921 Terminase large subunit, T4likevirus-type XFC3_11755 30c6336793ebfc0821ba345435992580 231 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 226 3.9E-107 T 11-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 XFC3_11755 30c6336793ebfc0821ba345435992580 231 SMART SM00448 3 116 2.1E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_11755 30c6336793ebfc0821ba345435992580 231 SUPERFAMILY SSF46894 127 225 3.12E-28 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XFC3_11755 30c6336793ebfc0821ba345435992580 231 Gene3D G3DSA:1.10.10.10 129 227 2.8E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_11755 30c6336793ebfc0821ba345435992580 231 SUPERFAMILY SSF52172 3 124 1.99E-41 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_11755 30c6336793ebfc0821ba345435992580 231 Pfam PF00072 Response regulator receiver domain 5 117 3.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_11755 30c6336793ebfc0821ba345435992580 231 Gene3D G3DSA:3.40.50.2300 1 128 1.5E-37 T 11-10-2018 XFC3_11755 30c6336793ebfc0821ba345435992580 231 SMART SM00862 150 225 2.4E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFC3_11755 30c6336793ebfc0821ba345435992580 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 4.4E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFC3_00410 889786debb5896c3e416c481119440bd 65 Gene3D G3DSA:2.60.260.40 9 63 1.8E-10 T 11-10-2018 XFC3_00410 889786debb5896c3e416c481119440bd 65 Pfam PF10276 Zinc-finger domain 36 61 4.7E-8 T 11-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_03650 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 188 205 7.4E-23 T 11-10-2018 XFC3_03650 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 113 128 7.4E-23 T 11-10-2018 XFC3_03650 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 153 166 7.4E-23 T 11-10-2018 XFC3_03650 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 267 282 7.4E-23 T 11-10-2018 XFC3_03650 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 28 43 7.4E-23 T 11-10-2018 XFC3_03650 f7e78601f1c3d0a818bff89dd1712ac0 322 Pfam PF08544 GHMP kinases C terminal 227 300 3.4E-12 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain XFC3_03650 f7e78601f1c3d0a818bff89dd1712ac0 322 PIRSF PIRSF000676 17 321 2.6E-82 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 XFC3_03650 f7e78601f1c3d0a818bff89dd1712ac0 322 SUPERFAMILY SSF54211 22 175 2.2E-26 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_03650 f7e78601f1c3d0a818bff89dd1712ac0 322 SUPERFAMILY SSF55060 187 301 2.64E-24 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XFC3_03650 f7e78601f1c3d0a818bff89dd1712ac0 322 Gene3D G3DSA:3.30.230.10 15 179 1.5E-42 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFC3_03650 f7e78601f1c3d0a818bff89dd1712ac0 322 Hamap MF_00384 Homoserine kinase [thrB]. 23 322 25.914 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 XFC3_03650 f7e78601f1c3d0a818bff89dd1712ac0 322 Pfam PF00288 GHMP kinases N terminal domain 100 166 4.1E-12 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 XFC3_03650 f7e78601f1c3d0a818bff89dd1712ac0 322 Gene3D G3DSA:3.30.70.890 180 313 3.5E-31 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XFC3_03650 f7e78601f1c3d0a818bff89dd1712ac0 322 TIGRFAM TIGR00191 thrB: homoserine kinase 25 290 4.3E-51 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 XFC3_10770 ec4100fbb2114f2cf7d45cafb16de5b8 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 315 1.5E-97 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 XFC3_10770 ec4100fbb2114f2cf7d45cafb16de5b8 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 323 35.018 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 XFC3_10770 ec4100fbb2114f2cf7d45cafb16de5b8 330 Gene3D G3DSA:3.40.718.10 2 324 1.4E-108 T 11-10-2018 XFC3_10770 ec4100fbb2114f2cf7d45cafb16de5b8 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 319 1.2E-113 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 XFC3_10770 ec4100fbb2114f2cf7d45cafb16de5b8 330 SUPERFAMILY SSF53659 4 323 1.92E-99 T 11-10-2018 XFC3_03090 4344d39e391cd6604089ac993fc647ec 443 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 373 403 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site XFC3_03090 4344d39e391cd6604089ac993fc647ec 443 Gene3D G3DSA:3.40.50.150 87 437 1.6E-97 T 11-10-2018 XFC3_03090 4344d39e391cd6604089ac993fc647ec 443 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 271 438 3.5E-20 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 XFC3_03090 4344d39e391cd6604089ac993fc647ec 443 Gene3D G3DSA:3.40.1350.30 133 274 1.6E-97 T 11-10-2018 XFC3_03090 4344d39e391cd6604089ac993fc647ec 443 Gene3D G3DSA:2.40.50.140 1 85 2.0E-23 T 11-10-2018 XFC3_03090 4344d39e391cd6604089ac993fc647ec 443 SUPERFAMILY SSF50249 12 72 5.6E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_03090 4344d39e391cd6604089ac993fc647ec 443 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 19 435 6.9E-92 T 11-10-2018 XFC3_03090 4344d39e391cd6604089ac993fc647ec 443 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 425 435 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site XFC3_03090 4344d39e391cd6604089ac993fc647ec 443 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 13 443 63.067 T 11-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 XFC3_03090 4344d39e391cd6604089ac993fc647ec 443 SUPERFAMILY SSF53335 74 441 2.08E-75 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_11990 9a3230bd70c481f620729f3c0e78f689 298 Gene3D G3DSA:3.30.230.10 8 174 5.2E-51 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFC3_11990 9a3230bd70c481f620729f3c0e78f689 298 Pfam PF08544 GHMP kinases C terminal 223 272 1.2E-4 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain XFC3_11990 9a3230bd70c481f620729f3c0e78f689 298 SUPERFAMILY SSF54211 20 172 1.06E-40 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_11990 9a3230bd70c481f620729f3c0e78f689 298 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 19 290 2.1E-64 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 XFC3_11990 9a3230bd70c481f620729f3c0e78f689 298 SUPERFAMILY SSF55060 175 292 5.04E-22 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XFC3_11990 9a3230bd70c481f620729f3c0e78f689 298 Gene3D G3DSA:3.30.70.890 176 294 7.6E-21 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XFC3_11990 9a3230bd70c481f620729f3c0e78f689 298 PIRSF PIRSF010376 16 294 1.4E-76 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 XFC3_11990 9a3230bd70c481f620729f3c0e78f689 298 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 18 286 29.878 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 XFC3_11990 9a3230bd70c481f620729f3c0e78f689 298 Pfam PF00288 GHMP kinases N terminal domain 101 158 8.4E-9 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 XFC3_02665 144f2813307e046e0bd51c9543d35b48 231 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 17 227 1.2E-60 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria XFC3_02665 144f2813307e046e0bd51c9543d35b48 231 Pfam PF03379 CcmB protein 16 228 2.0E-65 T 11-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02665 144f2813307e046e0bd51c9543d35b48 231 PIRSF PIRSF002764 7 231 1.4E-74 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria XFC3_02665 144f2813307e046e0bd51c9543d35b48 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 112 130 6.2E-48 T 11-10-2018 XFC3_02665 144f2813307e046e0bd51c9543d35b48 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 64 81 6.2E-48 T 11-10-2018 XFC3_02665 144f2813307e046e0bd51c9543d35b48 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 204 227 6.2E-48 T 11-10-2018 XFC3_02665 144f2813307e046e0bd51c9543d35b48 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 167 186 6.2E-48 T 11-10-2018 XFC3_02665 144f2813307e046e0bd51c9543d35b48 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 38 59 6.2E-48 T 11-10-2018 XFC3_02665 144f2813307e046e0bd51c9543d35b48 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 87 110 6.2E-48 T 11-10-2018 XFC3_09380 38a0d094020c6bda38dd811b510681f1 396 SUPERFAMILY SSF55347 130 268 4.9E-59 T 11-10-2018 XFC3_09380 38a0d094020c6bda38dd811b510681f1 396 PIRSF PIRSF006205 5 390 5.4E-152 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XFC3_09380 38a0d094020c6bda38dd811b510681f1 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 265 381 4.8E-38 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XFC3_09380 38a0d094020c6bda38dd811b510681f1 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 150 233 2.6E-39 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XFC3_09380 38a0d094020c6bda38dd811b510681f1 396 Gene3D G3DSA:3.40.50.720 1 154 1.2E-46 T 11-10-2018 XFC3_09380 38a0d094020c6bda38dd811b510681f1 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 8 136 6.3E-41 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XFC3_09380 38a0d094020c6bda38dd811b510681f1 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 8 386 45.199 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XFC3_09380 38a0d094020c6bda38dd811b510681f1 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 384 3.5E-137 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XFC3_09380 38a0d094020c6bda38dd811b510681f1 396 Gene3D G3DSA:1.10.1740.10 306 390 1.8E-27 T 11-10-2018 XFC3_09380 38a0d094020c6bda38dd811b510681f1 396 SUPERFAMILY SSF69055 295 386 1.31E-29 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XFC3_09380 38a0d094020c6bda38dd811b510681f1 396 SUPERFAMILY SSF51735 6 154 1.35E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_09035 a20697018795b73ebe9c42446066d0e2 189 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 XFC3_09035 a20697018795b73ebe9c42446066d0e2 189 SUPERFAMILY SSF52218 3 186 4.32E-45 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFC3_09035 a20697018795b73ebe9c42446066d0e2 189 Gene3D G3DSA:3.40.50.360 2 188 2.3E-54 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFC3_09035 a20697018795b73ebe9c42446066d0e2 189 Pfam PF03358 NADPH-dependent FMN reductase 46 123 1.6E-10 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 XFC3_07755 f883043d7e15865f5a1aa784fa2540e6 379 Gene3D G3DSA:3.40.50.620 1 208 5.5E-87 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_07755 f883043d7e15865f5a1aa784fa2540e6 379 SUPERFAMILY SSF52402 3 240 1.35E-49 T 11-10-2018 XFC3_07755 f883043d7e15865f5a1aa784fa2540e6 379 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 357 36.371 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 XFC3_07755 f883043d7e15865f5a1aa784fa2540e6 379 Pfam PF03054 tRNA methyl transferase 5 356 2.1E-128 T 11-10-2018 XFC3_07755 f883043d7e15865f5a1aa784fa2540e6 379 Gene3D G3DSA:2.30.30.280 209 276 7.3E-22 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 XFC3_07755 f883043d7e15865f5a1aa784fa2540e6 379 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 356 3.4E-126 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 XFC3_07755 f883043d7e15865f5a1aa784fa2540e6 379 Gene3D G3DSA:2.40.30.10 279 362 1.1E-25 T 11-10-2018 XFC3_10265 32a524665a105476bd991537403af3a9 181 Pfam PF03477 ATP cone domain 50 136 9.3E-12 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 XFC3_10265 32a524665a105476bd991537403af3a9 181 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.5E-55 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 XFC3_10265 32a524665a105476bd991537403af3a9 181 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 156 78.609 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 XFC3_03555 caf59034aace5666279d5d3d161c85c2 264 Pfam PF00717 Peptidase S24-like 69 151 5.4E-21 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XFC3_03555 caf59034aace5666279d5d3d161c85c2 264 SUPERFAMILY SSF51306 61 249 7.85E-62 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XFC3_03555 caf59034aace5666279d5d3d161c85c2 264 ProSitePatterns PS00761 Signal peptidases I signature 3. 207 220 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 XFC3_03555 caf59034aace5666279d5d3d161c85c2 264 Gene3D G3DSA:2.10.109.10 61 244 4.8E-60 T 11-10-2018 XFC3_03555 caf59034aace5666279d5d3d161c85c2 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 202 221 6.7E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XFC3_03555 caf59034aace5666279d5d3d161c85c2 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 127 139 6.7E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XFC3_03555 caf59034aace5666279d5d3d161c85c2 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 63 79 6.7E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XFC3_03555 caf59034aace5666279d5d3d161c85c2 264 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 48 244 5.1E-44 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XFC3_03555 caf59034aace5666279d5d3d161c85c2 264 Gene3D G3DSA:2.170.230.10 138 201 4.8E-60 T 11-10-2018 XFC3_03555 caf59034aace5666279d5d3d161c85c2 264 ProSitePatterns PS00760 Signal peptidases I lysine active site. 129 141 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 XFC3_11110 f71c9d6febb48f8e292c5c04772bd6f1 539 SMART SM00646 351 506 8.4E-68 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 XFC3_11110 f71c9d6febb48f8e292c5c04772bd6f1 539 Pfam PF11741 AMIN domain 41 121 2.4E-12 T 11-10-2018 IPR021731 AMIN domain XFC3_11110 f71c9d6febb48f8e292c5c04772bd6f1 539 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 291 506 2.0E-47 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 XFC3_11110 f71c9d6febb48f8e292c5c04772bd6f1 539 Gene3D G3DSA:2.60.40.3500 32 137 1.9E-16 T 11-10-2018 XFC3_11110 f71c9d6febb48f8e292c5c04772bd6f1 539 SUPERFAMILY SSF53187 289 509 4.39E-52 T 11-10-2018 XFC3_11110 f71c9d6febb48f8e292c5c04772bd6f1 539 Gene3D G3DSA:3.40.630.40 278 514 1.1E-74 T 11-10-2018 XFC3_10755 bc07967cf4889a62f6df20dd4132fc4a 507 SUPERFAMILY SSF48208 55 496 7.23E-165 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 XFC3_10755 bc07967cf4889a62f6df20dd4132fc4a 507 PIRSF PIRSF028846 62 497 1.1E-197 T 11-10-2018 IPR008313 Metal-independent alpha-mannosidase XFC3_10755 bc07967cf4889a62f6df20dd4132fc4a 507 Gene3D G3DSA:1.50.10.10 68 506 9.3E-165 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 XFC3_10755 bc07967cf4889a62f6df20dd4132fc4a 507 Pfam PF06824 Metal-independent alpha-mannosidase (GH125) 84 486 1.1E-148 T 11-10-2018 IPR008313 Metal-independent alpha-mannosidase XFC3_10755 bc07967cf4889a62f6df20dd4132fc4a 507 SMART SM01149 84 487 6.6E-240 T 11-10-2018 IPR008313 Metal-independent alpha-mannosidase XFC3_09555 36af0836d127ce946b9c2d4d9550b086 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 287 296 9.1E-11 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFC3_09555 36af0836d127ce946b9c2d4d9550b086 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 9.1E-11 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFC3_09555 36af0836d127ce946b9c2d4d9550b086 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 9.1E-11 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFC3_09555 36af0836d127ce946b9c2d4d9550b086 336 Gene3D G3DSA:3.40.50.1370 168 331 3.2E-113 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XFC3_09555 36af0836d127ce946b9c2d4d9550b086 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 315 329 3.0E-9 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_09555 36af0836d127ce946b9c2d4d9550b086 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 35 57 3.0E-9 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_09555 36af0836d127ce946b9c2d4d9550b086 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 147 164 3.0E-9 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFC3_09555 36af0836d127ce946b9c2d4d9550b086 336 Gene3D G3DSA:3.40.50.1370 5 167 3.2E-113 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XFC3_09555 36af0836d127ce946b9c2d4d9550b086 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 170 332 6.4E-32 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 XFC3_09555 36af0836d127ce946b9c2d4d9550b086 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 161 7.9E-34 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 XFC3_09555 36af0836d127ce946b9c2d4d9550b086 336 SUPERFAMILY SSF53671 2 334 2.23E-70 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XFC3_03610 c27357ecf5cb43f88dba2cd9ed7cccc8 293 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 11-10-2018 IPR018253 DnaJ domain, conserved site XFC3_03610 c27357ecf5cb43f88dba2cd9ed7cccc8 293 SUPERFAMILY SSF46565 1 105 5.5E-31 T 11-10-2018 IPR036869 Chaperone J-domain superfamily XFC3_03610 c27357ecf5cb43f88dba2cd9ed7cccc8 293 SUPERFAMILY SSF49493 200 282 3.14E-16 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 XFC3_03610 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Pfam PF01556 DnaJ C terminal domain 138 271 2.1E-24 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal XFC3_03610 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Pfam PF00226 DnaJ domain 5 66 2.5E-24 T 11-10-2018 IPR001623 DnaJ domain XFC3_03610 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Gene3D G3DSA:2.60.260.20 132 192 1.2E-13 T 11-10-2018 XFC3_03610 c27357ecf5cb43f88dba2cd9ed7cccc8 293 SUPERFAMILY SSF49493 131 200 1.57E-10 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 XFC3_03610 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Gene3D G3DSA:1.10.287.110 2 124 5.1E-33 T 11-10-2018 IPR036869 Chaperone J-domain superfamily XFC3_03610 c27357ecf5cb43f88dba2cd9ed7cccc8 293 SMART SM00271 4 61 3.3E-27 T 11-10-2018 IPR001623 DnaJ domain XFC3_03610 c27357ecf5cb43f88dba2cd9ed7cccc8 293 PRINTS PR00625 DnaJ domain signature 7 25 5.3E-22 T 11-10-2018 IPR001623 DnaJ domain XFC3_03610 c27357ecf5cb43f88dba2cd9ed7cccc8 293 PRINTS PR00625 DnaJ domain signature 25 40 5.3E-22 T 11-10-2018 IPR001623 DnaJ domain XFC3_03610 c27357ecf5cb43f88dba2cd9ed7cccc8 293 PRINTS PR00625 DnaJ domain signature 41 61 5.3E-22 T 11-10-2018 IPR001623 DnaJ domain XFC3_03610 c27357ecf5cb43f88dba2cd9ed7cccc8 293 PRINTS PR00625 DnaJ domain signature 61 80 5.3E-22 T 11-10-2018 IPR001623 DnaJ domain XFC3_03610 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Gene3D G3DSA:2.60.260.20 194 271 3.0E-25 T 11-10-2018 XFC3_09405 31df5752ab3d9ae61f475a1499e66790 263 PIRSF PIRSF000456 5 263 3.1E-97 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 XFC3_09405 31df5752ab3d9ae61f475a1499e66790 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 142 1.9E-7 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_09405 31df5752ab3d9ae61f475a1499e66790 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 19 52 6.9E-7 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_09405 31df5752ab3d9ae61f475a1499e66790 263 SUPERFAMILY SSF51161 5 262 2.46E-71 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFC3_09405 31df5752ab3d9ae61f475a1499e66790 263 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 263 44.829 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 XFC3_09405 31df5752ab3d9ae61f475a1499e66790 263 Gene3D G3DSA:1.20.1180.10 198 263 5.2E-22 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 XFC3_09405 31df5752ab3d9ae61f475a1499e66790 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 260 6.4E-25 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 XFC3_09405 31df5752ab3d9ae61f475a1499e66790 263 Gene3D G3DSA:2.160.10.10 2 190 6.2E-49 T 11-10-2018 XFC3_09405 31df5752ab3d9ae61f475a1499e66790 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 261 1.1E-107 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 XFC3_03410 2e7e48e407acf7b64772fac428452261 317 SMART SM00849 66 251 4.1E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFC3_03410 2e7e48e407acf7b64772fac428452261 317 Pfam PF00753 Metallo-beta-lactamase superfamily 66 251 7.8E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFC3_03410 2e7e48e407acf7b64772fac428452261 317 SUPERFAMILY SSF56281 49 275 2.1E-41 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFC3_03410 2e7e48e407acf7b64772fac428452261 317 Gene3D G3DSA:3.60.15.10 48 286 7.7E-32 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFC3_11060 d7ba270d7f19845a1b3e9d0e13a1ef35 89 SUPERFAMILY SSF47336 5 86 2.62E-11 T 11-10-2018 IPR036736 ACP-like superfamily XFC3_11060 d7ba270d7f19845a1b3e9d0e13a1ef35 89 Pfam PF00550 Phosphopantetheine attachment site 10 65 2.9E-7 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain XFC3_11060 d7ba270d7f19845a1b3e9d0e13a1ef35 89 Gene3D G3DSA:1.10.1200.10 7 88 2.2E-16 T 11-10-2018 IPR036736 ACP-like superfamily XFC3_04435 4a3e3c19f41a10654d9bce0ccdddd9d5 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 87 115 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XFC3_04435 4a3e3c19f41a10654d9bce0ccdddd9d5 186 SUPERFAMILY SSF51161 7 139 2.08E-29 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFC3_04435 4a3e3c19f41a10654d9bce0ccdddd9d5 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 44 8.3E-5 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_04435 4a3e3c19f41a10654d9bce0ccdddd9d5 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 2.5E-6 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_04435 4a3e3c19f41a10654d9bce0ccdddd9d5 186 Gene3D G3DSA:2.160.10.10 1 182 7.6E-47 T 11-10-2018 XFC3_08835 66784cb60b93b02f33e7644955ac6218 86 Pfam PF04380 Membrane fusogenic activity 1 77 1.7E-20 T 11-10-2018 IPR007475 Membrane fusogenic activity XFC3_08165 db25ed4ae5ce82a4ac0ee129167c4f32 246 Pfam PF03932 CutC family 7 205 4.8E-86 T 11-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 XFC3_08165 db25ed4ae5ce82a4ac0ee129167c4f32 246 Gene3D G3DSA:3.20.20.380 5 244 6.7E-79 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 XFC3_08165 db25ed4ae5ce82a4ac0ee129167c4f32 246 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 5 207 29.014 T 11-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 XFC3_08165 db25ed4ae5ce82a4ac0ee129167c4f32 246 SUPERFAMILY SSF110395 7 242 8.11E-67 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 XFC3_03935 03ba363765a44fa3c919117daf0e1397 137 SUPERFAMILY SSF81301 23 127 1.96E-38 T 11-10-2018 XFC3_03935 03ba363765a44fa3c919117daf0e1397 137 Gene3D G3DSA:3.30.460.10 20 134 1.9E-37 T 11-10-2018 XFC3_03935 03ba363765a44fa3c919117daf0e1397 137 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 23 120 8.7E-37 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS XFC3_03935 03ba363765a44fa3c919117daf0e1397 137 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 121 24.847 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS XFC3_03935 03ba363765a44fa3c919117daf0e1397 137 Pfam PF02410 Ribosomal silencing factor during starvation 26 120 5.8E-28 T 11-10-2018 XFC3_10015 9e384f2ee2f8984c5b7c180d9d015459 650 Pfam PF05876 Phage terminase large subunit (GpA) 44 596 1.5E-168 T 11-10-2018 IPR008866 Bacteriophage lambda, GpA XFC3_10015 9e384f2ee2f8984c5b7c180d9d015459 650 Gene3D G3DSA:3.40.50.300 20 237 6.3E-12 T 11-10-2018 XFC3_11320 9e384f2ee2f8984c5b7c180d9d015459 650 Pfam PF05876 Phage terminase large subunit (GpA) 44 596 1.5E-168 T 11-10-2018 IPR008866 Bacteriophage lambda, GpA XFC3_11320 9e384f2ee2f8984c5b7c180d9d015459 650 Gene3D G3DSA:3.40.50.300 20 237 6.3E-12 T 11-10-2018 XFC3_07435 9e384f2ee2f8984c5b7c180d9d015459 650 Pfam PF05876 Phage terminase large subunit (GpA) 44 596 1.5E-168 T 11-10-2018 IPR008866 Bacteriophage lambda, GpA XFC3_07435 9e384f2ee2f8984c5b7c180d9d015459 650 Gene3D G3DSA:3.40.50.300 20 237 6.3E-12 T 11-10-2018 XFC3_06300 797804dff4048db8dcafe007baa69d4a 164 Pfam PF07883 Cupin domain 72 140 3.8E-12 T 11-10-2018 IPR013096 Cupin 2, conserved barrel XFC3_06300 797804dff4048db8dcafe007baa69d4a 164 Gene3D G3DSA:2.60.120.10 33 163 1.1E-49 T 11-10-2018 IPR014710 RmlC-like jelly roll fold XFC3_06300 797804dff4048db8dcafe007baa69d4a 164 SUPERFAMILY SSF51182 43 162 3.26E-31 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily XFC3_05320 2e01c0331b69307648d33a804fff99fb 510 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 25 506 5.9E-105 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 XFC3_05320 2e01c0331b69307648d33a804fff99fb 510 SUPERFAMILY SSF103473 18 312 3.14E-20 T 11-10-2018 IPR036259 MFS transporter superfamily XFC3_05320 2e01c0331b69307648d33a804fff99fb 510 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 164 176 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 XFC3_05320 2e01c0331b69307648d33a804fff99fb 510 Gene3D G3DSA:1.20.1250.20 18 510 7.8E-121 T 11-10-2018 XFC3_05320 2e01c0331b69307648d33a804fff99fb 510 Pfam PF00854 POT family 103 467 1.9E-65 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 XFC3_05320 2e01c0331b69307648d33a804fff99fb 510 SUPERFAMILY SSF103473 240 506 4.71E-8 T 11-10-2018 IPR036259 MFS transporter superfamily XFC3_05695 ca0efb170c79a0ec106378cc1b4406d3 516 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 356 506 5.9E-57 T 11-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit XFC3_05695 ca0efb170c79a0ec106378cc1b4406d3 516 Pfam PF17289 Terminase RNaseH-like domain 344 502 4.9E-14 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like XFC3_05300 3d44a9c51980b91c4515d605c14e9561 271 SUPERFAMILY SSF48452 145 259 9.7E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_05300 3d44a9c51980b91c4515d605c14e9561 271 Pfam PF16331 TolA binding protein trimerisation 27 98 3.4E-20 T 11-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 XFC3_05300 3d44a9c51980b91c4515d605c14e9561 271 Pfam PF13525 Outer membrane lipoprotein 144 265 2.2E-11 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like XFC3_05300 3d44a9c51980b91c4515d605c14e9561 271 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 261 2.1E-38 T 11-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal XFC3_05300 3d44a9c51980b91c4515d605c14e9561 271 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 1 264 18.705 T 11-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 XFC3_05300 3d44a9c51980b91c4515d605c14e9561 271 Gene3D G3DSA:1.25.40.10 145 271 6.1E-33 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_01035 ebc3a50876462fe1873e5588043a0a14 144 Gene3D G3DSA:1.10.10.10 17 134 3.5E-43 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_01035 ebc3a50876462fe1873e5588043a0a14 144 Pfam PF01638 HxlR-like helix-turn-helix 35 122 2.1E-28 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type XFC3_01035 ebc3a50876462fe1873e5588043a0a14 144 SUPERFAMILY SSF46785 21 138 1.29E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 Pfam PF01301 Glycosyl hydrolases family 35 34 352 3.8E-117 T 11-10-2018 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 548 564 7.0E-48 T 11-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 114 133 7.0E-48 T 11-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 38 55 7.0E-48 T 11-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 169 184 7.0E-48 T 11-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 321 337 7.0E-48 T 11-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 59 77 7.0E-48 T 11-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 255 270 7.0E-48 T 11-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 SUPERFAMILY SSF49785 386 492 9.5E-5 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 SUPERFAMILY SSF49785 466 594 4.11E-20 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 Gene3D G3DSA:3.20.20.80 26 295 5.2E-100 T 11-10-2018 XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 Gene3D G3DSA:2.60.120.260 296 589 1.3E-90 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 SUPERFAMILY SSF51445 28 352 2.08E-94 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 Gene3D G3DSA:2.60.120.260 375 506 1.3E-90 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 PIRSF PIRSF006336 14 604 1.3E-176 T 11-10-2018 IPR026283 Beta-galactosidase 1-like GO:0004565 XFC3_10765 703f6bcb6e5299afb2c8ab8d357e2fe4 612 ProSitePatterns PS01182 Glycosyl hydrolases family 35 putative active site. 171 183 - T 11-10-2018 IPR019801 Glycoside hydrolase, family 35, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFC3_10145 ea96b1761c1cca6afaeafc68e1f23ee3 188 SUPERFAMILY SSF50249 6 169 1.2E-10 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_10145 ea96b1761c1cca6afaeafc68e1f23ee3 188 Gene3D G3DSA:2.40.50.140 1 172 1.6E-48 T 11-10-2018 XFC3_10145 ea96b1761c1cca6afaeafc68e1f23ee3 188 Pfam PF10991 Protein of unknown function (DUF2815) 2 173 1.6E-47 T 11-10-2018 IPR022595 Protein of unknown function DUF2815 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 PIRSF PIRSF001400 1 427 6.9E-181 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 ProSitePatterns PS00164 Enolase signature. 336 349 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 SUPERFAMILY SSF54826 4 136 5.08E-52 T 11-10-2018 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 Gene3D G3DSA:3.20.20.120 128 430 4.0E-128 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 425 7.9E-128 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 SMART SM01192 141 427 6.8E-211 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 SUPERFAMILY SSF51604 141 427 7.07E-122 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 Pfam PF03952 Enolase, N-terminal domain 4 134 6.7E-55 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 Gene3D G3DSA:3.30.390.10 1 126 6.6E-52 T 11-10-2018 IPR029017 Enolase-like, N-terminal XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 SMART SM01193 4 134 3.0E-84 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 PRINTS PR00148 Enolase signature 37 51 3.5E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 PRINTS PR00148 Enolase signature 163 176 3.5E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 PRINTS PR00148 Enolase signature 107 123 3.5E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 PRINTS PR00148 Enolase signature 365 382 3.5E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 PRINTS PR00148 Enolase signature 313 324 3.5E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 PRINTS PR00148 Enolase signature 336 350 3.5E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 Hamap MF_00318 Enolase [eno]. 2 413 43.579 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFC3_08395 051851fbc7a6c7cfb29602f7fc1ceee6 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 1.2E-197 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFC3_08510 02fceff3b2bba6d3f96136993a7e9015 193 SUPERFAMILY SSF53098 10 183 9.22E-43 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFC3_08510 02fceff3b2bba6d3f96136993a7e9015 193 Gene3D G3DSA:3.30.420.10 7 189 3.8E-67 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFC3_08510 02fceff3b2bba6d3f96136993a7e9015 193 Pfam PF00929 Exonuclease 15 176 4.4E-26 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFC3_08510 02fceff3b2bba6d3f96136993a7e9015 193 Hamap MF_00045 Oligoribonuclease [orn]. 9 187 39.476 T 11-10-2018 IPR022894 Oligoribonuclease GO:0000175 XFC3_08510 02fceff3b2bba6d3f96136993a7e9015 193 SMART SM00479 13 186 2.9E-7 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFC3_08615 e9076584206a0f43b5cc03dd26780094 160 Pfam PF13185 GAF domain 55 153 9.3E-11 T 11-10-2018 IPR003018 GAF domain GO:0005515 XFC3_08615 e9076584206a0f43b5cc03dd26780094 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 11-10-2018 IPR000614 Free Met sulfoxide reductase conserved site XFC3_08615 e9076584206a0f43b5cc03dd26780094 160 Gene3D G3DSA:3.30.450.40 10 160 1.4E-61 T 11-10-2018 IPR029016 GAF-like domain superfamily XFC3_08615 e9076584206a0f43b5cc03dd26780094 160 SUPERFAMILY SSF55781 13 158 1.44E-42 T 11-10-2018 XFC3_03695 b540918add6ddba57060038483687c57 265 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 244 31.243 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 XFC3_03695 b540918add6ddba57060038483687c57 265 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 241 1.0E-74 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 XFC3_03695 b540918add6ddba57060038483687c57 265 Pfam PF00977 Histidine biosynthesis protein 5 236 2.9E-66 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 XFC3_03695 b540918add6ddba57060038483687c57 265 Gene3D G3DSA:3.20.20.70 4 249 1.2E-77 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_03695 b540918add6ddba57060038483687c57 265 SUPERFAMILY SSF51366 3 243 3.85E-60 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XFC3_02830 105bda6d29d6bf98c9a77188677b4251 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_02830 105bda6d29d6bf98c9a77188677b4251 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.3E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_02830 105bda6d29d6bf98c9a77188677b4251 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.3E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_02830 105bda6d29d6bf98c9a77188677b4251 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.3E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_02830 105bda6d29d6bf98c9a77188677b4251 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.541 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_02830 105bda6d29d6bf98c9a77188677b4251 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_02830 105bda6d29d6bf98c9a77188677b4251 85 Gene3D G3DSA:2.40.50.100 21 85 1.0E-28 T 11-10-2018 XFC3_02830 105bda6d29d6bf98c9a77188677b4251 85 SUPERFAMILY SSF110324 2 81 2.48E-32 T 11-10-2018 XFC3_02830 105bda6d29d6bf98c9a77188677b4251 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.4E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_02830 105bda6d29d6bf98c9a77188677b4251 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.1E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_04745 08cf350697d14a4732102871e86243af 478 Gene3D G3DSA:1.20.1280.70 354 414 9.3E-21 T 11-10-2018 XFC3_04745 08cf350697d14a4732102871e86243af 478 SUPERFAMILY SSF53098 2 471 2.81E-114 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFC3_04745 08cf350697d14a4732102871e86243af 478 Pfam PF08411 Exonuclease C-terminal 206 472 1.7E-91 T 11-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 XFC3_04745 08cf350697d14a4732102871e86243af 478 Pfam PF00929 Exonuclease 7 185 1.8E-22 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFC3_04745 08cf350697d14a4732102871e86243af 478 Gene3D G3DSA:2.30.30.450 208 348 1.4E-40 T 11-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily XFC3_04745 08cf350697d14a4732102871e86243af 478 Gene3D G3DSA:3.30.420.10 2 195 4.4E-64 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFC3_04745 08cf350697d14a4732102871e86243af 478 SMART SM00479 4 197 1.7E-4 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFC3_04745 08cf350697d14a4732102871e86243af 478 PIRSF PIRSF000977 1 477 1.4E-176 T 11-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 XFC3_09420 7a504d56ef1a5446cfbc3de344c69754 435 Gene3D G3DSA:3.30.300.30 333 433 4.9E-12 T 11-10-2018 XFC3_09420 7a504d56ef1a5446cfbc3de344c69754 435 Gene3D G3DSA:3.40.50.12780 7 300 1.1E-22 T 11-10-2018 XFC3_09420 7a504d56ef1a5446cfbc3de344c69754 435 SUPERFAMILY SSF56801 8 433 3.53E-47 T 11-10-2018 XFC3_09420 7a504d56ef1a5446cfbc3de344c69754 435 Pfam PF00501 AMP-binding enzyme 113 278 5.7E-16 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XFC3_07675 7a93898e4d3fa0745606f47eac81c510 394 SUPERFAMILY SSF53335 21 378 8.47E-85 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_07675 7a93898e4d3fa0745606f47eac81c510 394 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 79 322 4.9E-47 T 11-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 XFC3_07675 7a93898e4d3fa0745606f47eac81c510 394 Gene3D G3DSA:3.40.50.12710 6 394 5.2E-112 T 11-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 XFC3_05090 3aeffe671ac140da5ea6e441635a5e1e 164 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 36 159 9.0E-33 T 11-10-2018 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 XFC3_05090 3aeffe671ac140da5ea6e441635a5e1e 164 SUPERFAMILY SSF54427 35 158 6.92E-29 T 11-10-2018 IPR032710 NTF2-like domain superfamily XFC3_05090 3aeffe671ac140da5ea6e441635a5e1e 164 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 36 159 1.2E-26 T 11-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 XFC3_05090 3aeffe671ac140da5ea6e441635a5e1e 164 Gene3D G3DSA:3.10.450.50 20 162 3.6E-44 T 11-10-2018 XFC3_05090 3aeffe671ac140da5ea6e441635a5e1e 164 PIRSF PIRSF028470 1 162 1.3E-56 T 11-10-2018 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related XFC3_00200 fbf54f1fffdf625924353819064f8c03 161 Gene3D G3DSA:2.40.50.100 84 160 7.8E-30 T 11-10-2018 XFC3_00200 fbf54f1fffdf625924353819064f8c03 161 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 161 1.1E-49 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XFC3_00200 fbf54f1fffdf625924353819064f8c03 161 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 117 134 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XFC3_00200 fbf54f1fffdf625924353819064f8c03 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 107 121 9.5E-15 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XFC3_00200 fbf54f1fffdf625924353819064f8c03 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 122 135 9.5E-15 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XFC3_00200 fbf54f1fffdf625924353819064f8c03 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 90 103 9.5E-15 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XFC3_00200 fbf54f1fffdf625924353819064f8c03 161 Pfam PF00364 Biotin-requiring enzyme 87 160 8.3E-23 T 11-10-2018 IPR000089 Biotin/lipoyl attachment XFC3_00200 fbf54f1fffdf625924353819064f8c03 161 SUPERFAMILY SSF51230 86 160 4.32E-24 T 11-10-2018 IPR011053 Single hybrid motif XFC3_02660 07878a783efc88572cc59b0b8503266b 247 Pfam PF01578 Cytochrome C assembly protein 10 187 2.0E-25 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 XFC3_02660 07878a783efc88572cc59b0b8503266b 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 50 212 2.3E-59 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02660 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 124 144 2.7E-40 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02660 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 65 85 2.7E-40 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02660 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 103 123 2.7E-40 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02660 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 48 65 2.7E-40 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02660 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 159 185 2.7E-40 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_06615 94758d74fa98cb2e41d5c234a2fd4c41 280 Gene3D G3DSA:3.90.550.10 2 228 8.7E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_06615 94758d74fa98cb2e41d5c234a2fd4c41 280 Pfam PF00535 Glycosyl transferase family 2 8 154 1.1E-19 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XFC3_06615 94758d74fa98cb2e41d5c234a2fd4c41 280 SUPERFAMILY SSF53448 7 262 7.11E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_09275 6714c892a86277e353b65ed37289061e 127 SUPERFAMILY SSF81343 12 123 8.83E-27 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09275 6714c892a86277e353b65ed37289061e 127 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 117 1.2E-16 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09275 6714c892a86277e353b65ed37289061e 127 Gene3D G3DSA:1.20.1300.10 12 123 2.5E-25 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09275 6714c892a86277e353b65ed37289061e 127 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 18 120 3.4E-28 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 XFC3_11910 549c4033f92763a10e0188371d2f200b 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 95 2.0E-12 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11910 549c4033f92763a10e0188371d2f200b 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 1.6E-17 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11910 549c4033f92763a10e0188371d2f200b 122 SUPERFAMILY SSF48300 4 59 1.44E-16 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11910 549c4033f92763a10e0188371d2f200b 122 SUPERFAMILY SSF54736 52 122 3.49E-22 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XFC3_11910 549c4033f92763a10e0188371d2f200b 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 122 8.4E-25 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11910 549c4033f92763a10e0188371d2f200b 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 2.3E-41 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11910 549c4033f92763a10e0188371d2f200b 122 Gene3D G3DSA:3.30.1390.10 53 122 2.5E-26 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XFC3_11910 549c4033f92763a10e0188371d2f200b 122 Gene3D G3DSA:1.20.5.710 2 52 6.7E-20 T 11-10-2018 XFC3_11910 549c4033f92763a10e0188371d2f200b 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 23.786 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11355 4ac55000931d4060a8cf8e1a50fffa0f 843 SMART SM00885 373 532 5.2E-51 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XFC3_11355 4ac55000931d4060a8cf8e1a50fffa0f 843 Pfam PF08706 D5 N terminal like 374 531 3.3E-35 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XFC3_11355 4ac55000931d4060a8cf8e1a50fffa0f 843 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 481 803 1.7E-80 T 11-10-2018 IPR006500 DNA primase, phage/plasmid XFC3_11355 4ac55000931d4060a8cf8e1a50fffa0f 843 Pfam PF03288 Poxvirus D5 protein-like 752 820 4.0E-5 T 11-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal XFC3_11355 4ac55000931d4060a8cf8e1a50fffa0f 843 SUPERFAMILY SSF52540 529 690 3.64E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 PRINTS PR01415 Ankyrin repeat signature 440 455 9.2E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 PRINTS PR01415 Ankyrin repeat signature 862 876 9.2E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 Gene3D G3DSA:1.25.40.20 232 402 6.0E-31 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SUPERFAMILY SSF48403 240 517 2.17E-51 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 Gene3D G3DSA:1.25.40.20 960 1092 2.6E-14 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 945 982 150.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 472 501 0.46 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 748 777 0.026 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 272 301 1100.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 912 941 0.43 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 403 435 610.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 1030 1059 0.082 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 235 264 350.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 439 468 2.5E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 373 402 1.4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 340 369 0.092 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 505 536 580.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 304 336 12.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 846 875 0.0037 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 715 744 320.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SMART SM00248 879 908 14.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 Pfam PF12796 Ankyrin repeats (3 copies) 321 400 1.3E-9 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 Pfam PF12796 Ankyrin repeats (3 copies) 697 778 2.8E-7 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 Pfam PF12796 Ankyrin repeats (3 copies) 421 498 5.7E-10 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 Pfam PF12796 Ankyrin repeats (3 copies) 821 904 6.1E-11 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 Gene3D G3DSA:1.25.40.20 815 959 3.4E-35 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 Gene3D G3DSA:1.25.40.20 403 676 9.8E-36 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 Gene3D G3DSA:1.25.40.20 680 814 1.4E-23 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XFC3_06585 bd0585f0a3845b83019d337f0b8c0349 1101 SUPERFAMILY SSF48403 691 1083 9.83E-58 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XFC3_03115 b945ceae72950a7428f147a765c38fcf 67 PRINTS PR00050 Cold shock protein signature 4 19 9.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFC3_03115 b945ceae72950a7428f147a765c38fcf 67 PRINTS PR00050 Cold shock protein signature 25 34 9.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFC3_03115 b945ceae72950a7428f147a765c38fcf 67 PRINTS PR00050 Cold shock protein signature 40 58 9.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFC3_03115 b945ceae72950a7428f147a765c38fcf 67 SMART SM00357 3 67 1.8E-28 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 XFC3_03115 b945ceae72950a7428f147a765c38fcf 67 SUPERFAMILY SSF50249 1 66 4.5E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_03115 b945ceae72950a7428f147a765c38fcf 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-10-2018 IPR019844 Cold-shock conserved site XFC3_03115 b945ceae72950a7428f147a765c38fcf 67 Gene3D G3DSA:2.40.50.140 1 65 1.5E-28 T 11-10-2018 XFC3_03115 b945ceae72950a7428f147a765c38fcf 67 PIRSF PIRSF002599 1 67 7.0E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 XFC3_03115 b945ceae72950a7428f147a765c38fcf 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 3.4E-29 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFC3_00935 b847ab7de4df551c3104146e5396b94f 384 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 367 1.8E-149 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XFC3_00935 b847ab7de4df551c3104146e5396b94f 384 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 365 1.1E-83 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XFC3_00935 b847ab7de4df551c3104146e5396b94f 384 SUPERFAMILY SSF51713 3 366 7.46E-148 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XFC3_00935 b847ab7de4df551c3104146e5396b94f 384 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 367 1.7E-143 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XFC3_00935 b847ab7de4df551c3104146e5396b94f 384 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 368 54.902 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XFC3_00935 b847ab7de4df551c3104146e5396b94f 384 Gene3D G3DSA:3.20.20.105 1 369 1.1E-152 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XFC3_05405 25acaac53820c2f45ced67db959a5572 116 Pfam PF12375 Phage protein 15 67 3.1E-5 T 11-10-2018 IPR021077 Bacteriophage phi-Lf, Orf112 XFC3_06115 7b6a6cac1852e577b1c2988dbd3ea118 172 Gene3D G3DSA:3.10.420.10 3 167 4.8E-53 T 11-10-2018 IPR035958 SecB-like superfamily XFC3_06115 7b6a6cac1852e577b1c2988dbd3ea118 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 23 40 4.1E-36 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XFC3_06115 7b6a6cac1852e577b1c2988dbd3ea118 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 107 129 4.1E-36 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XFC3_06115 7b6a6cac1852e577b1c2988dbd3ea118 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 133 151 4.1E-36 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XFC3_06115 7b6a6cac1852e577b1c2988dbd3ea118 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 83 103 4.1E-36 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XFC3_06115 7b6a6cac1852e577b1c2988dbd3ea118 172 Pfam PF02556 Preprotein translocase subunit SecB 18 153 2.1E-51 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XFC3_06115 7b6a6cac1852e577b1c2988dbd3ea118 172 Hamap MF_00821 Protein-export protein SecB [secB]. 1 155 31.28 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XFC3_06115 7b6a6cac1852e577b1c2988dbd3ea118 172 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 19 151 3.8E-46 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XFC3_06115 7b6a6cac1852e577b1c2988dbd3ea118 172 SUPERFAMILY SSF54611 19 150 9.81E-46 T 11-10-2018 IPR035958 SecB-like superfamily XFC3_09990 6456953dcb24f91abd635d805a503027 107 Gene3D G3DSA:2.40.10.180 12 107 1.8E-5 T 11-10-2018 XFC3_11295 6456953dcb24f91abd635d805a503027 107 Gene3D G3DSA:2.40.10.180 12 107 1.8E-5 T 11-10-2018 XFC3_07460 6456953dcb24f91abd635d805a503027 107 Gene3D G3DSA:2.40.10.180 12 107 1.8E-5 T 11-10-2018 XFC3_07000 fc53d02c2ba047523adafcb96a82463a 153 Pfam PF05433 Glycine zipper 2TM domain 61 107 8.9E-11 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 SUPERFAMILY SSF47323 668 934 8.6E-69 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 Pfam PF08264 Anticodon-binding domain of tRNA 701 857 4.1E-24 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 934 20.98 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 Gene3D G3DSA:1.10.730.20 656 934 3.9E-84 T 11-10-2018 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 SUPERFAMILY SSF52374 5 663 1.0E-132 T 11-10-2018 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 544 557 3.2E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 419 434 3.2E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 577 586 3.2E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 3.2E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 3.2E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 Pfam PF06827 Zinc finger found in FPG and IleRS 905 931 4.1E-7 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 Gene3D G3DSA:3.90.740.10 196 426 1.4E-217 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 Gene3D G3DSA:3.40.50.620 26 645 1.4E-217 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 16 858 2.4E-264 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 657 3.9E-194 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_02855 0dd9da07235c372d6d68eebda688c763 943 SUPERFAMILY SSF50677 205 421 4.19E-40 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XFC3_06945 d28450ac7999dd60f7a68eb60a5af4b4 79 Gene3D G3DSA:2.40.50.140 1 69 1.6E-8 T 11-10-2018 XFC3_06945 d28450ac7999dd60f7a68eb60a5af4b4 79 SUPERFAMILY SSF50249 8 79 2.26E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_06945 d28450ac7999dd60f7a68eb60a5af4b4 79 Pfam PF00436 Single-strand binding protein family 8 39 2.1E-7 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XFC3_04660 86e7ef26c354ebb85a57a20dfaaafc9a 236 Gene3D G3DSA:1.20.910.10 1 234 2.7E-61 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 XFC3_04660 86e7ef26c354ebb85a57a20dfaaafc9a 236 SUPERFAMILY SSF48613 5 214 1.06E-30 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 XFC3_04660 86e7ef26c354ebb85a57a20dfaaafc9a 236 Pfam PF14518 Iron-containing redox enzyme 41 205 5.0E-23 T 11-10-2018 XFC3_09020 a77cf4828d3a76f20588e3ce3360205a 229 Gene3D G3DSA:3.40.50.880 1 229 4.8E-67 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_09020 a77cf4828d3a76f20588e3ce3360205a 229 Pfam PF01965 DJ-1/PfpI family 26 222 1.6E-13 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 XFC3_09020 a77cf4828d3a76f20588e3ce3360205a 229 SUPERFAMILY SSF52317 6 225 7.97E-66 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_01635 2da83a69f250e0580df40d1afd5853b9 227 Gene3D G3DSA:1.10.10.10 123 227 1.0E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_01635 2da83a69f250e0580df40d1afd5853b9 227 SMART SM00862 145 220 3.4E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFC3_01635 2da83a69f250e0580df40d1afd5853b9 227 Pfam PF00072 Response regulator receiver domain 3 113 2.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_01635 2da83a69f250e0580df40d1afd5853b9 227 SMART SM00448 1 112 3.2E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_01635 2da83a69f250e0580df40d1afd5853b9 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 4.3E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFC3_01635 2da83a69f250e0580df40d1afd5853b9 227 Gene3D G3DSA:3.40.50.2300 1 121 6.4E-40 T 11-10-2018 XFC3_01635 2da83a69f250e0580df40d1afd5853b9 227 SUPERFAMILY SSF52172 1 169 2.11E-38 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_07595 4b13aac5ca9a36faf4cb0d015d0a2c43 485 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 20 476 3.4E-193 T 11-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 XFC3_07595 4b13aac5ca9a36faf4cb0d015d0a2c43 485 Pfam PF01458 Uncharacterized protein family (UPF0051) 223 456 5.2E-68 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 XFC3_07595 4b13aac5ca9a36faf4cb0d015d0a2c43 485 SUPERFAMILY SSF101960 41 482 8.24E-137 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily XFC3_11330 50998738d1c351690b9081341c03a5c8 73 ProDom PD272324 XF1567/XF1672 1 67 2.0E-29 T 11-10-2018 IPR020247 Uncharacterised protein family XF1567 XFC3_07425 50998738d1c351690b9081341c03a5c8 73 ProDom PD272324 XF1567/XF1672 1 67 2.0E-29 T 11-10-2018 IPR020247 Uncharacterised protein family XF1567 XFC3_10025 50998738d1c351690b9081341c03a5c8 73 ProDom PD272324 XF1567/XF1672 1 67 2.0E-29 T 11-10-2018 IPR020247 Uncharacterised protein family XF1567 XFC3_04995 b64cde8c88e6395e5d1ba6343fc9599c 307 Gene3D G3DSA:3.30.930.10 4 222 2.2E-108 T 11-10-2018 XFC3_04995 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 120 144 3.6E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_04995 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 68 83 3.6E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_04995 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 259 275 3.6E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_04995 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 89 109 3.6E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_04995 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 146 166 3.6E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_04995 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 169 184 3.6E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_04995 b64cde8c88e6395e5d1ba6343fc9599c 307 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 16 298 9.1E-147 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_04995 b64cde8c88e6395e5d1ba6343fc9599c 307 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 15 305 4.4E-157 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_04995 b64cde8c88e6395e5d1ba6343fc9599c 307 SUPERFAMILY SSF55681 15 298 1.74E-129 T 11-10-2018 XFC3_04995 b64cde8c88e6395e5d1ba6343fc9599c 307 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 14 299 59.027 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFC3_04995 b64cde8c88e6395e5d1ba6343fc9599c 307 Gene3D G3DSA:1.20.58.180 223 304 8.7E-32 T 11-10-2018 XFC3_05040 e4a1e4da1012555d294b083318b67b82 399 SUPERFAMILY SSF52738 220 375 6.8E-21 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal XFC3_05040 e4a1e4da1012555d294b083318b67b82 399 PIRSF PIRSF036592 8 397 2.7E-216 T 11-10-2018 IPR012071 Chemotaxis glutamate methyltransferase XFC3_05040 e4a1e4da1012555d294b083318b67b82 399 Pfam PF01339 CheB methylesterase 225 365 2.0E-10 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 XFC3_05040 e4a1e4da1012555d294b083318b67b82 399 Gene3D G3DSA:3.40.50.180 222 363 3.4E-10 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal XFC3_00195 556036d81edd920669d222d9378bf008 148 Pfam PF01220 Dehydroquinase class II 4 140 1.8E-54 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XFC3_00195 556036d81edd920669d222d9378bf008 148 SUPERFAMILY SSF52304 3 145 4.71E-57 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XFC3_00195 556036d81edd920669d222d9378bf008 148 Gene3D G3DSA:3.40.50.9100 1 147 5.1E-59 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XFC3_00195 556036d81edd920669d222d9378bf008 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 142 2.0E-53 T 11-10-2018 XFC3_00195 556036d81edd920669d222d9378bf008 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 67.877 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XFC3_00195 556036d81edd920669d222d9378bf008 148 PIRSF PIRSF001399 1 146 6.9E-53 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XFC3_00195 556036d81edd920669d222d9378bf008 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 142 7.1E-53 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XFC3_00195 556036d81edd920669d222d9378bf008 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XFC3_00440 a4bc439ad7ae2e8082e1a4183d884adf 86 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.937 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_00440 a4bc439ad7ae2e8082e1a4183d884adf 86 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_00440 a4bc439ad7ae2e8082e1a4183d884adf 86 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 1.9E-33 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_00440 a4bc439ad7ae2e8082e1a4183d884adf 86 Gene3D G3DSA:3.30.1320.10 1 86 6.6E-31 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_00440 a4bc439ad7ae2e8082e1a4183d884adf 86 Pfam PF00886 Ribosomal protein S16 8 68 3.0E-24 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_00440 a4bc439ad7ae2e8082e1a4183d884adf 86 SUPERFAMILY SSF54565 1 79 7.85E-30 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_03295 bd03ece491007c6fb62b6d4c283ac3a6 211 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XFC3_03295 bd03ece491007c6fb62b6d4c283ac3a6 211 PIRSF PIRSF000847 1 195 1.9E-43 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 XFC3_03295 bd03ece491007c6fb62b6d4c283ac3a6 211 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 191 4.6E-51 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 XFC3_03295 bd03ece491007c6fb62b6d4c283ac3a6 211 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 3.5E-16 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XFC3_03295 bd03ece491007c6fb62b6d4c283ac3a6 211 Gene3D G3DSA:1.20.120.1760 2 177 1.9E-13 T 11-10-2018 XFC3_01465 324a17564fdf373006f30b7d78b3b4ba 927 Pfam PF00593 TonB dependent receptor 391 924 7.0E-51 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFC3_01465 324a17564fdf373006f30b7d78b3b4ba 927 Gene3D G3DSA:2.170.130.10 39 179 1.5E-37 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFC3_01465 324a17564fdf373006f30b7d78b3b4ba 927 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 175 1.9E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFC3_01465 324a17564fdf373006f30b7d78b3b4ba 927 SUPERFAMILY SSF56935 44 926 6.59E-100 T 11-10-2018 XFC3_06785 d8f033865f486c328615be4307e83f24 213 Gene3D G3DSA:2.40.50.230 28 126 9.5E-26 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XFC3_09135 61c4d5f58d135fc93d18620e2b36e330 613 Gene3D G3DSA:3.90.1640.30 56 345 3.3E-80 T 11-10-2018 XFC3_09135 61c4d5f58d135fc93d18620e2b36e330 613 SUPERFAMILY SSF64182 56 485 3.79E-103 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily XFC3_09135 61c4d5f58d135fc93d18620e2b36e330 613 Gene3D G3DSA:3.10.310.30 350 480 7.1E-28 T 11-10-2018 XFC3_09135 61c4d5f58d135fc93d18620e2b36e330 613 Pfam PF01368 DHH family 82 209 2.0E-9 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 XFC3_09135 61c4d5f58d135fc93d18620e2b36e330 613 Pfam PF02272 DHHA1 domain 341 473 4.3E-22 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 XFC3_09135 61c4d5f58d135fc93d18620e2b36e330 613 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 48 591 3.2E-131 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 XFC3_04480 f7819a3360518a52377f44c158ea409e 205 Gene3D G3DSA:1.10.357.10 12 204 5.9E-27 T 11-10-2018 XFC3_04480 f7819a3360518a52377f44c158ea409e 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 2.5E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XFC3_04480 f7819a3360518a52377f44c158ea409e 205 SUPERFAMILY SSF48498 90 204 6.58E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XFC3_04480 f7819a3360518a52377f44c158ea409e 205 SUPERFAMILY SSF46689 12 95 2.72E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFC3_04480 f7819a3360518a52377f44c158ea409e 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 6.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XFC3_04480 f7819a3360518a52377f44c158ea409e 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 6.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XFC3_11970 21276a165078d0a8a3c2394c4110fdf2 192 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 189 3.1E-56 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 XFC3_11970 21276a165078d0a8a3c2394c4110fdf2 192 Gene3D G3DSA:3.40.50.1470 2 192 1.1E-59 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 XFC3_11970 21276a165078d0a8a3c2394c4110fdf2 192 SUPERFAMILY SSF53178 5 189 1.57E-64 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 XFC3_11970 21276a165078d0a8a3c2394c4110fdf2 192 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 XFC3_11970 21276a165078d0a8a3c2394c4110fdf2 192 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 33.995 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 XFC3_11970 21276a165078d0a8a3c2394c4110fdf2 192 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 4.0E-50 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 XFC3_10725 f9bee6a9367a423d732e4160902a5cd4 156 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 16 138 1.9E-46 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 XFC3_10725 f9bee6a9367a423d732e4160902a5cd4 156 Gene3D G3DSA:2.170.150.20 11 155 1.5E-54 T 11-10-2018 XFC3_10725 f9bee6a9367a423d732e4160902a5cd4 156 Pfam PF01641 SelR domain 20 137 1.5E-46 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 XFC3_10725 f9bee6a9367a423d732e4160902a5cd4 156 SUPERFAMILY SSF51316 15 140 1.62E-50 T 11-10-2018 IPR011057 Mss4-like superfamily XFC3_10725 f9bee6a9367a423d732e4160902a5cd4 156 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 11 138 34.664 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 XFC3_11845 c5b39f7b19e5d88030af6c8f4bd26c07 146 SUPERFAMILY SSF53933 58 141 5.1E-32 T 11-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 XFC3_11845 c5b39f7b19e5d88030af6c8f4bd26c07 146 Pfam PF00545 ribonuclease 59 139 1.7E-26 T 11-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 XFC3_11845 c5b39f7b19e5d88030af6c8f4bd26c07 146 Gene3D G3DSA:3.10.450.30 51 145 4.9E-33 T 11-10-2018 XFC3_01490 ae0a896c12e7f639b485862fe7e2958f 461 SUPERFAMILY SSF56176 7 219 9.81E-71 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XFC3_01490 ae0a896c12e7f639b485862fe7e2958f 461 Pfam PF01565 FAD binding domain 44 182 7.0E-42 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 XFC3_01490 ae0a896c12e7f639b485862fe7e2958f 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 457 5.6E-70 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 XFC3_01490 ae0a896c12e7f639b485862fe7e2958f 461 Gene3D G3DSA:3.30.465.40 8 237 2.1E-72 T 11-10-2018 XFC3_01490 ae0a896c12e7f639b485862fe7e2958f 461 Gene3D G3DSA:1.10.45.10 418 458 4.8E-16 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 XFC3_01490 ae0a896c12e7f639b485862fe7e2958f 461 Gene3D G3DSA:3.30.70.2740 336 417 2.5E-17 T 11-10-2018 XFC3_01490 ae0a896c12e7f639b485862fe7e2958f 461 SUPERFAMILY SSF55103 192 459 3.6E-61 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 XFC3_05070 cc186729c95efaaab9877f4a3e6b66ad 145 Pfam PF06903 VirK protein 29 124 5.4E-32 T 11-10-2018 IPR010694 Uncharacterised protein family VirK XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 SMART SM00448 5 116 4.1E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 Gene3D G3DSA:1.10.10.60 410 470 2.5E-16 T 11-10-2018 XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 SUPERFAMILY SSF46689 355 469 6.27E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 SMART SM00382 161 304 8.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 Pfam PF02954 Bacterial regulatory protein, Fis family 427 467 2.6E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 SUPERFAMILY SSF52540 142 382 5.19E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 Gene3D G3DSA:1.10.8.60 312 388 2.9E-21 T 11-10-2018 XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 Pfam PF00072 Response regulator receiver domain 8 116 4.2E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 Gene3D G3DSA:3.40.50.2300 1 132 1.2E-32 T 11-10-2018 XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 Pfam PF00158 Sigma-54 interaction domain 142 307 1.2E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 SUPERFAMILY SSF52172 4 185 1.57E-41 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 Gene3D G3DSA:3.40.50.300 133 311 1.1E-60 T 11-10-2018 XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 2.3E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFC3_11545 fdef3f59ba7aa62b53306d8d57ce43ea 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 2.3E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFC3_03335 2b2c494239390195bbdc360bf5e51ef2 444 SUPERFAMILY SSF53383 1 425 7.9E-128 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFC3_03335 2b2c494239390195bbdc360bf5e51ef2 444 Gene3D G3DSA:3.90.1150.10 9 419 3.5E-174 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFC3_03335 2b2c494239390195bbdc360bf5e51ef2 444 Pfam PF00202 Aminotransferase class-III 35 396 7.3E-76 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFC3_03335 2b2c494239390195bbdc360bf5e51ef2 444 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 427 101.854 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 XFC3_03335 2b2c494239390195bbdc360bf5e51ef2 444 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 9.8E-187 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 XFC3_03335 2b2c494239390195bbdc360bf5e51ef2 444 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFC3_03335 2b2c494239390195bbdc360bf5e51ef2 444 Gene3D G3DSA:3.40.640.10 71 319 3.5E-174 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFC3_05960 b4bfa017d6a0c47a214e7424a2da5d7a 552 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 444 3.5E-180 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 XFC3_05960 b4bfa017d6a0c47a214e7424a2da5d7a 552 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 549 50.817 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 XFC3_05960 b4bfa017d6a0c47a214e7424a2da5d7a 552 SUPERFAMILY SSF56112 92 434 9.48E-34 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily XFC3_05960 b4bfa017d6a0c47a214e7424a2da5d7a 552 Pfam PF03109 ABC1 family 110 227 2.8E-33 T 11-10-2018 IPR004147 UbiB domain XFC3_05340 4353ae668de57dfbb27545ec7b8738bd 716 Pfam PF10459 Peptidase S46 22 713 2.1E-262 T 11-10-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 XFC3_05340 4353ae668de57dfbb27545ec7b8738bd 716 SUPERFAMILY SSF50494 29 700 4.5E-24 T 11-10-2018 IPR009003 Peptidase S1, PA clan XFC3_05340 4353ae668de57dfbb27545ec7b8738bd 716 Gene3D G3DSA:2.40.10.10 629 691 7.4E-6 T 11-10-2018 XFC3_11145 00f8205e7b7de839c996dbb2f98d1c51 362 Pfam PF00570 HRDC domain 214 256 1.5E-4 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 XFC3_11145 00f8205e7b7de839c996dbb2f98d1c51 362 Pfam PF01612 3'-5' exonuclease 3 167 4.6E-27 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XFC3_11145 00f8205e7b7de839c996dbb2f98d1c51 362 Gene3D G3DSA:1.10.150.80 295 361 3.6E-5 T 11-10-2018 XFC3_11145 00f8205e7b7de839c996dbb2f98d1c51 362 SUPERFAMILY SSF47819 195 282 2.83E-13 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 XFC3_11145 00f8205e7b7de839c996dbb2f98d1c51 362 TIGRFAM TIGR01388 rnd: ribonuclease D 4 358 5.4E-148 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 XFC3_11145 00f8205e7b7de839c996dbb2f98d1c51 362 SUPERFAMILY SSF53098 2 188 4.99E-55 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFC3_11145 00f8205e7b7de839c996dbb2f98d1c51 362 SUPERFAMILY SSF47819 294 358 4.58E-11 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 XFC3_11145 00f8205e7b7de839c996dbb2f98d1c51 362 Gene3D G3DSA:3.30.420.10 3 190 4.0E-54 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFC3_11145 00f8205e7b7de839c996dbb2f98d1c51 362 SMART SM00474 2 168 2.6E-30 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XFC3_11145 00f8205e7b7de839c996dbb2f98d1c51 362 Gene3D G3DSA:1.10.150.80 192 293 3.2E-6 T 11-10-2018 XFC3_08150 86797e46f4f256f3ef79ad1162a70eff 286 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 16 278 7.2E-124 T 11-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 XFC3_08150 86797e46f4f256f3ef79ad1162a70eff 286 SUPERFAMILY SSF161098 23 271 1.4E-56 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_08150 86797e46f4f256f3ef79ad1162a70eff 286 Gene3D G3DSA:1.10.3720.10 22 280 1.1E-68 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_08150 86797e46f4f256f3ef79ad1162a70eff 286 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 13 276 4.7E-96 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 XFC3_08150 86797e46f4f256f3ef79ad1162a70eff 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 276 4.5E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFC3_11605 62aa971e0fff231dd386539a6116a888 157 Gene3D G3DSA:3.40.630.30 1 156 2.4E-31 T 11-10-2018 XFC3_11605 62aa971e0fff231dd386539a6116a888 157 SUPERFAMILY SSF55729 9 144 8.54E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFC3_11605 62aa971e0fff231dd386539a6116a888 157 Pfam PF00583 Acetyltransferase (GNAT) family 24 140 1.6E-10 T 11-10-2018 IPR000182 GNAT domain XFC3_09525 ee867381a80060133914585b9b518808 384 SUPERFAMILY SSF53633 19 269 9.03E-59 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFC3_09525 ee867381a80060133914585b9b518808 384 ProSitePatterns PS00902 Glutamate 5-kinase signature. 219 236 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XFC3_09525 ee867381a80060133914585b9b518808 384 SUPERFAMILY SSF88697 289 383 2.98E-22 T 11-10-2018 IPR015947 PUA-like superfamily XFC3_09525 ee867381a80060133914585b9b518808 384 Gene3D G3DSA:2.30.130.10 278 384 1.0E-27 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 XFC3_09525 ee867381a80060133914585b9b518808 384 Pfam PF00696 Amino acid kinase family 20 247 1.9E-37 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XFC3_09525 ee867381a80060133914585b9b518808 384 Hamap MF_00456 Glutamate 5-kinase [proB]. 19 271 33.807 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XFC3_09525 ee867381a80060133914585b9b518808 384 SMART SM00359 289 376 9.1E-13 T 11-10-2018 IPR002478 PUA domain GO:0003723 XFC3_09525 ee867381a80060133914585b9b518808 384 Gene3D G3DSA:3.40.1160.10 13 277 3.0E-73 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFC3_09525 ee867381a80060133914585b9b518808 384 PRINTS PR00474 Glutamate 5-kinase family signature 160 187 3.2E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XFC3_09525 ee867381a80060133914585b9b518808 384 PRINTS PR00474 Glutamate 5-kinase family signature 56 70 3.2E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XFC3_09525 ee867381a80060133914585b9b518808 384 PRINTS PR00474 Glutamate 5-kinase family signature 128 149 3.2E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XFC3_09525 ee867381a80060133914585b9b518808 384 PRINTS PR00474 Glutamate 5-kinase family signature 221 241 3.2E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XFC3_09525 ee867381a80060133914585b9b518808 384 Pfam PF01472 PUA domain 289 364 2.3E-19 T 11-10-2018 IPR002478 PUA domain GO:0003723 XFC3_09525 ee867381a80060133914585b9b518808 384 PIRSF PIRSF000729 15 384 6.7E-126 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 XFC3_09525 ee867381a80060133914585b9b518808 384 TIGRFAM TIGR01027 proB: glutamate 5-kinase 20 382 6.2E-115 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XFC3_02085 9f26e8bbd43e6a7546ee4783f1c73c8f 246 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 13 230 4.4E-65 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XFC3_02085 9f26e8bbd43e6a7546ee4783f1c73c8f 246 ProSitePatterns PS01218 TatC family signature. 158 177 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site XFC3_02085 9f26e8bbd43e6a7546ee4783f1c73c8f 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 2.3E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XFC3_02085 9f26e8bbd43e6a7546ee4783f1c73c8f 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 2.3E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XFC3_02085 9f26e8bbd43e6a7546ee4783f1c73c8f 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 12 39 2.3E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XFC3_02085 9f26e8bbd43e6a7546ee4783f1c73c8f 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 158 186 2.3E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XFC3_02085 9f26e8bbd43e6a7546ee4783f1c73c8f 246 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 8 244 16.13 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XFC3_02085 9f26e8bbd43e6a7546ee4783f1c73c8f 246 Pfam PF00902 Sec-independent protein translocase protein (TatC) 15 225 1.2E-64 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XFC3_04795 5b6ad4cce3494bf89dd64debf1ef5983 181 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 21 160 3.7E-10 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 XFC3_04795 5b6ad4cce3494bf89dd64debf1ef5983 181 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 2 180 31.02 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 XFC3_04795 5b6ad4cce3494bf89dd64debf1ef5983 181 Gene3D G3DSA:1.20.120.740 1 174 7.2E-47 T 11-10-2018 XFC3_04795 5b6ad4cce3494bf89dd64debf1ef5983 181 Pfam PF03695 Uncharacterised protein family (UPF0149) 10 168 5.0E-30 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 XFC3_04795 5b6ad4cce3494bf89dd64debf1ef5983 181 SUPERFAMILY SSF101327 5 169 2.75E-39 T 11-10-2018 IPR036255 YgfB-like superfamily XFC3_01505 eca461ad36a0c8b474340d116d81d593 718 Gene3D G3DSA:2.40.50.140 55 149 4.5E-8 T 11-10-2018 XFC3_01505 eca461ad36a0c8b474340d116d81d593 718 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 37 686 1.3E-210 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 XFC3_01505 eca461ad36a0c8b474340d116d81d593 718 SUPERFAMILY SSF52540 463 679 8.05E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01505 eca461ad36a0c8b474340d116d81d593 718 Gene3D G3DSA:3.40.50.300 220 461 3.2E-76 T 11-10-2018 XFC3_01505 eca461ad36a0c8b474340d116d81d593 718 SUPERFAMILY SSF50249 16 183 1.88E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_01505 eca461ad36a0c8b474340d116d81d593 718 Pfam PF17191 RecG wedge domain 24 181 1.3E-12 T 11-10-2018 IPR033454 RecG, wedge domain XFC3_01505 eca461ad36a0c8b474340d116d81d593 718 Pfam PF00270 DEAD/DEAH box helicase 283 416 4.2E-15 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFC3_01505 eca461ad36a0c8b474340d116d81d593 718 Pfam PF00271 Helicase conserved C-terminal domain 533 613 2.9E-16 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_01505 eca461ad36a0c8b474340d116d81d593 718 SMART SM00487 276 470 3.3E-26 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_01505 eca461ad36a0c8b474340d116d81d593 718 Gene3D G3DSA:3.40.50.300 468 655 2.2E-52 T 11-10-2018 XFC3_01505 eca461ad36a0c8b474340d116d81d593 718 SMART SM00490 530 614 5.6E-22 T 11-10-2018 IPR001650 Helicase, C-terminal XFC3_01505 eca461ad36a0c8b474340d116d81d593 718 SUPERFAMILY SSF52540 193 464 6.06E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_12000 0cc9de0ee924633b816e0b88b77a09a3 559 SUPERFAMILY SSF48452 205 363 1.09E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_12000 0cc9de0ee924633b816e0b88b77a09a3 559 Gene3D G3DSA:1.25.40.10 376 556 2.3E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_12000 0cc9de0ee924633b816e0b88b77a09a3 559 SUPERFAMILY SSF48452 379 549 5.63E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_12000 0cc9de0ee924633b816e0b88b77a09a3 559 SMART SM00028 412 445 2.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_12000 0cc9de0ee924633b816e0b88b77a09a3 559 SMART SM00028 446 480 220.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_12000 0cc9de0ee924633b816e0b88b77a09a3 559 SMART SM00028 514 547 2.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_12000 0cc9de0ee924633b816e0b88b77a09a3 559 Pfam PF13432 Tetratricopeptide repeat 462 504 0.014 T 11-10-2018 XFC3_12000 0cc9de0ee924633b816e0b88b77a09a3 559 Pfam PF13432 Tetratricopeptide repeat 385 445 0.011 T 11-10-2018 XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 174 3.1E-39 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 SUPERFAMILY SSF52490 15 210 1.57E-68 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 357 37.387 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 PRINTS PR00423 Cell division protein FtsZ signature 191 213 4.1E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 PRINTS PR00423 Cell division protein FtsZ signature 214 235 4.1E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 PRINTS PR00423 Cell division protein FtsZ signature 100 120 4.1E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 PRINTS PR00423 Cell division protein FtsZ signature 128 149 4.1E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 SMART SM00864 15 207 1.2E-110 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 Pfam PF12327 FtsZ family, C-terminal domain 224 318 1.4E-37 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 SMART SM00865 209 327 2.7E-53 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 333 3.3E-129 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 ProSitePatterns PS01135 FtsZ protein signature 2. 99 120 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 Gene3D G3DSA:3.40.50.1440 5 222 6.5E-80 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 SUPERFAMILY SSF55307 206 320 2.98E-42 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 XFC3_10900 3a83dbc1326ff7938f52a9acdfd3e6e7 411 Gene3D G3DSA:3.30.1330.20 223 335 1.0E-34 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 XFC3_02050 b2619d2aa8ad5d24a454f6129dc2fd0c 576 Gene3D G3DSA:3.40.50.2300 253 561 2.0E-69 T 11-10-2018 XFC3_02050 b2619d2aa8ad5d24a454f6129dc2fd0c 576 Pfam PF04348 LppC putative lipoprotein 42 568 1.9E-184 T 11-10-2018 IPR007443 Penicillin-binding protein activator LpoA XFC3_02050 b2619d2aa8ad5d24a454f6129dc2fd0c 576 SUPERFAMILY SSF53822 250 573 2.46E-61 T 11-10-2018 IPR028082 Periplasmic binding protein-like I XFC3_02050 b2619d2aa8ad5d24a454f6129dc2fd0c 576 Gene3D G3DSA:3.40.50.2300 358 562 2.0E-69 T 11-10-2018 XFC3_10995 c9de3fd8d2ee1cd723ec1ca65368c64c 598 Gene3D G3DSA:3.40.50.1110 18 302 4.1E-76 T 11-10-2018 IPR036514 SGNH hydrolase superfamily XFC3_10995 c9de3fd8d2ee1cd723ec1ca65368c64c 598 SMART SM00869 332 590 3.5E-22 T 11-10-2018 IPR005546 Autotransporter beta-domain XFC3_10995 c9de3fd8d2ee1cd723ec1ca65368c64c 598 PIRSF PIRSF037375 1 598 1.4E-201 T 11-10-2018 IPR017186 Lipase, autotransporter EstA XFC3_10995 c9de3fd8d2ee1cd723ec1ca65368c64c 598 SUPERFAMILY SSF103515 328 558 2.75E-25 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFC3_10995 c9de3fd8d2ee1cd723ec1ca65368c64c 598 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 32 290 6.4E-12 T 11-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 XFC3_10995 c9de3fd8d2ee1cd723ec1ca65368c64c 598 SUPERFAMILY SSF52266 31 297 7.66E-17 T 11-10-2018 XFC3_10995 c9de3fd8d2ee1cd723ec1ca65368c64c 598 Pfam PF03797 Autotransporter beta-domain 339 559 1.1E-33 T 11-10-2018 IPR005546 Autotransporter beta-domain XFC3_10995 c9de3fd8d2ee1cd723ec1ca65368c64c 598 Gene3D G3DSA:2.40.128.130 312 598 1.7E-37 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFC3_10950 ff9ef4d6607e4906f64f4524000a98fc 613 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 209 3.0E-18 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 XFC3_10950 ff9ef4d6607e4906f64f4524000a98fc 613 Gene3D G3DSA:3.40.710.10 286 467 6.1E-111 T 11-10-2018 XFC3_10950 ff9ef4d6607e4906f64f4524000a98fc 613 Pfam PF00905 Penicillin binding protein transpeptidase domain 250 546 9.4E-83 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XFC3_10950 ff9ef4d6607e4906f64f4524000a98fc 613 SUPERFAMILY SSF56601 177 577 2.9E-96 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFC3_10950 ff9ef4d6607e4906f64f4524000a98fc 613 Gene3D G3DSA:3.30.450.330 226 550 6.1E-111 T 11-10-2018 XFC3_10950 ff9ef4d6607e4906f64f4524000a98fc 613 SUPERFAMILY SSF56519 57 224 4.58E-47 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 XFC3_10950 ff9ef4d6607e4906f64f4524000a98fc 613 Gene3D G3DSA:3.90.1310.30 53 224 1.8E-49 T 11-10-2018 XFC3_10950 ff9ef4d6607e4906f64f4524000a98fc 613 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 13 561 43.053 T 11-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFC3_08830 a387f86f3a8d4650cc2bb69e2956d921 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 210 225 7.7E-7 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XFC3_08830 a387f86f3a8d4650cc2bb69e2956d921 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 290 304 7.7E-7 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XFC3_08830 a387f86f3a8d4650cc2bb69e2956d921 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 318 331 7.7E-7 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XFC3_08830 a387f86f3a8d4650cc2bb69e2956d921 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 342 354 7.7E-7 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XFC3_08830 a387f86f3a8d4650cc2bb69e2956d921 506 SMART SM00382 211 393 1.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_08830 a387f86f3a8d4650cc2bb69e2956d921 506 SUPERFAMILY SSF52540 191 501 5.28E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08830 a387f86f3a8d4650cc2bb69e2956d921 506 Gene3D G3DSA:3.40.50.300 186 499 4.8E-56 T 11-10-2018 XFC3_08830 a387f86f3a8d4650cc2bb69e2956d921 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 394 2.0E-95 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain XFC3_08830 a387f86f3a8d4650cc2bb69e2956d921 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 496 4.1E-182 T 11-10-2018 IPR004482 Mg chelatase-related protein XFC3_08830 a387f86f3a8d4650cc2bb69e2956d921 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 3.4E-41 T 11-10-2018 XFC3_08830 a387f86f3a8d4650cc2bb69e2956d921 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 404 496 3.3E-28 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain XFC3_08830 a387f86f3a8d4650cc2bb69e2956d921 506 SUPERFAMILY SSF54211 10 168 1.1E-28 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_02700 85ea07503b1865f50dc2a9c328466582 302 Hamap MF_01805 Segregation and condensation protein A [scpA]. 47 278 22.443 T 11-10-2018 IPR003768 Segregation and condensation protein A XFC3_02700 85ea07503b1865f50dc2a9c328466582 302 Pfam PF02616 Segregation and condensation protein ScpA 64 275 2.8E-29 T 11-10-2018 IPR003768 Segregation and condensation protein A XFC3_05620 55e3ad6ec7de069d4458a76ac6d8d0f6 140 Pfam PF10876 Phage tail assemb.y chaperone protein, TAC 7 138 1.3E-64 T 11-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC XFC3_05620 55e3ad6ec7de069d4458a76ac6d8d0f6 140 ProDom PD298513 SIMILAR PD1186 XF1585/XF1690 PD0970 9 127 4.0E-60 T 11-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC XFC3_06815 55e3ad6ec7de069d4458a76ac6d8d0f6 140 Pfam PF10876 Phage tail assemb.y chaperone protein, TAC 7 138 1.3E-64 T 11-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC XFC3_06815 55e3ad6ec7de069d4458a76ac6d8d0f6 140 ProDom PD298513 SIMILAR PD1186 XF1585/XF1690 PD0970 9 127 4.0E-60 T 11-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 Pfam PF07516 SecA Wing and Scaffold domain 615 826 1.3E-64 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 SUPERFAMILY SSF52540 6 411 6.55E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 815 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 829 19.959 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 Pfam PF07517 SecA DEAD-like domain 7 398 2.5E-132 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 ProSitePatterns PS01312 SecA family signature. 496 511 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 Pfam PF01043 SecA preprotein cross-linking domain 233 354 1.9E-38 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 SUPERFAMILY SSF81886 618 902 1.22E-78 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 Gene3D G3DSA:3.40.50.300 22 411 1.7E-177 T 11-10-2018 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 Gene3D G3DSA:3.90.1440.10 229 364 1.7E-177 T 11-10-2018 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 Gene3D G3DSA:3.40.50.300 413 617 1.1E-84 T 11-10-2018 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 SMART SM00958 228 354 3.2E-78 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 SUPERFAMILY SSF52540 412 615 2.76E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 Gene3D G3DSA:1.10.3060.10 619 830 2.8E-71 T 11-10-2018 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 SUPERFAMILY SSF81767 227 364 1.44E-43 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 SMART SM00957 6 398 0.0 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 63 87 1.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 335 357 1.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 372 389 1.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 409 422 1.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 117 127 1.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 170 190 1.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 101 115 1.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFC3_10880 eeacf8512171c11a336a979842aa7bcc 914 Pfam PF02810 SEC-C motif 894 911 8.4E-11 T 11-10-2018 IPR004027 SEC-C motif XFC3_10845 cb886c97dd23d81111b5d96602d7ccbf 169 Gene3D G3DSA:1.10.10.10 14 102 4.5E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_10845 cb886c97dd23d81111b5d96602d7ccbf 169 Gene3D G3DSA:3.30.1490.190 105 163 2.1E-14 T 11-10-2018 XFC3_10845 cb886c97dd23d81111b5d96602d7ccbf 169 Pfam PF01475 Ferric uptake regulator family 30 152 7.8E-11 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 XFC3_10845 cb886c97dd23d81111b5d96602d7ccbf 169 SUPERFAMILY SSF46785 25 157 7.44E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 Gene3D G3DSA:3.30.230.10 596 783 1.1E-77 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 SMART SM00464 10 203 1.1E-65 T 11-10-2018 IPR003111 Lon, substrate-binding domain XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 Hamap MF_01973 Lon protease [lon]. 11 783 69.797 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 201 9.9E-36 T 11-10-2018 IPR003111 Lon, substrate-binding domain XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 SUPERFAMILY SSF88697 10 202 9.94E-44 T 11-10-2018 IPR015947 PUA-like superfamily XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 687 695 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 353 489 1.2E-17 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 SUPERFAMILY SSF52540 317 597 4.86E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 TIGRFAM TIGR00763 lon: endopeptidase La 13 782 2.4E-300 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 581 783 3.1E-92 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 Gene3D G3DSA:2.30.130.40 1 115 4.1E-31 T 11-10-2018 XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 SMART SM00382 349 495 1.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 PIRSF PIRSF001174 1 785 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 Gene3D G3DSA:1.10.8.60 492 595 1.4E-29 T 11-10-2018 XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 SUPERFAMILY SSF54211 606 781 2.16E-56 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 Gene3D G3DSA:1.20.58.1480 122 246 3.3E-42 T 11-10-2018 XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 Gene3D G3DSA:3.40.50.300 314 491 4.5E-62 T 11-10-2018 XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 714 733 5.7E-53 T 11-10-2018 XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 357 376 5.7E-53 T 11-10-2018 XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 737 755 5.7E-53 T 11-10-2018 XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 606 622 5.7E-53 T 11-10-2018 XFC3_08780 9b5730b31ddfa54b745b7e7ec7ad72d3 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 684 703 5.7E-53 T 11-10-2018 XFC3_11760 523d6a7cfeb7eeaafca13a5225ff8d45 542 Pfam PF01435 Peptidase family M48 66 262 1.1E-42 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 XFC3_11760 523d6a7cfeb7eeaafca13a5225ff8d45 542 Gene3D G3DSA:1.25.40.10 318 510 1.2E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_11760 523d6a7cfeb7eeaafca13a5225ff8d45 542 SUPERFAMILY SSF48452 330 435 2.32E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_11760 523d6a7cfeb7eeaafca13a5225ff8d45 542 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 1 533 33.533 T 11-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 XFC3_11760 523d6a7cfeb7eeaafca13a5225ff8d45 542 Gene3D G3DSA:3.30.2010.10 65 146 2.1E-8 T 11-10-2018 XFC3_00760 4b779179363dd02884ed1eddc3457dc2 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XFC3_00760 4b779179363dd02884ed1eddc3457dc2 260 Gene3D G3DSA:3.20.20.140 1 256 4.2E-78 T 11-10-2018 XFC3_00760 4b779179363dd02884ed1eddc3457dc2 260 SUPERFAMILY SSF51556 5 255 5.68E-79 T 11-10-2018 IPR032466 Metal-dependent hydrolase XFC3_00760 4b779179363dd02884ed1eddc3457dc2 260 Pfam PF01026 TatD related DNase 6 253 7.2E-69 T 11-10-2018 IPR001130 TatD family GO:0016788 XFC3_00760 4b779179363dd02884ed1eddc3457dc2 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 127 137 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XFC3_00760 4b779179363dd02884ed1eddc3457dc2 260 PIRSF PIRSF005902 1 258 8.8E-71 T 11-10-2018 IPR001130 TatD family GO:0016788 XFC3_00760 4b779179363dd02884ed1eddc3457dc2 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XFC3_00480 ee3a610e0c91f2feb636e32d7ac9e862 563 Pfam PF00733 Asparagine synthase 214 370 2.9E-56 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 XFC3_00480 ee3a610e0c91f2feb636e32d7ac9e862 563 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 374 1.4E-107 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 XFC3_00480 ee3a610e0c91f2feb636e32d7ac9e862 563 SUPERFAMILY SSF52402 212 487 1.89E-73 T 11-10-2018 XFC3_00480 ee3a610e0c91f2feb636e32d7ac9e862 563 Gene3D G3DSA:3.40.50.620 198 522 2.6E-106 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_00480 ee3a610e0c91f2feb636e32d7ac9e862 563 SMART SM01172 5 210 0.0054 T 11-10-2018 IPR024286 Domain of unknown function DUF3700 XFC3_00480 ee3a610e0c91f2feb636e32d7ac9e862 563 Pfam PF13537 Glutamine amidotransferase domain 50 169 6.9E-41 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain XFC3_00480 ee3a610e0c91f2feb636e32d7ac9e862 563 PIRSF PIRSF001589 366 524 2.5E-28 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 XFC3_00480 ee3a610e0c91f2feb636e32d7ac9e862 563 PIRSF PIRSF001589 1 371 1.4E-108 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 XFC3_00480 ee3a610e0c91f2feb636e32d7ac9e862 563 SUPERFAMILY SSF56235 1 198 3.69E-56 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFC3_00480 ee3a610e0c91f2feb636e32d7ac9e862 563 Gene3D G3DSA:3.60.20.10 2 196 1.3E-63 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFC3_00390 153afcd98476cac1ca5d2b6455489a53 101 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 100 4.0E-47 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 XFC3_00390 153afcd98476cac1ca5d2b6455489a53 101 SUPERFAMILY SSF75471 4 96 1.02E-24 T 11-10-2018 IPR035920 YhbY-like superfamily XFC3_00390 153afcd98476cac1ca5d2b6455489a53 101 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 88 3.5E-17 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 XFC3_00390 153afcd98476cac1ca5d2b6455489a53 101 Gene3D G3DSA:3.30.110.60 3 101 1.5E-27 T 11-10-2018 IPR035920 YhbY-like superfamily XFC3_00390 153afcd98476cac1ca5d2b6455489a53 101 SMART SM01103 5 88 1.1E-31 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 XFC3_06400 60fa44288f258790f2186654347b449b 243 Gene3D G3DSA:3.40.430.10 1 239 3.7E-36 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XFC3_06400 60fa44288f258790f2186654347b449b 243 SUPERFAMILY SSF53597 2 237 3.93E-35 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XFC3_06400 60fa44288f258790f2186654347b449b 243 Pfam PF01872 RibD C-terminal domain 4 218 8.6E-16 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 XFC3_01945 4becce32456c8b8dcacabdd04699bece 522 Pfam PF12792 CSS motif domain associated with EAL 37 232 3.9E-34 T 11-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain XFC3_01945 4becce32456c8b8dcacabdd04699bece 522 SMART SM00052 263 507 5.6E-91 T 11-10-2018 IPR001633 EAL domain XFC3_01945 4becce32456c8b8dcacabdd04699bece 522 Gene3D G3DSA:3.20.20.450 266 520 9.5E-85 T 11-10-2018 IPR035919 EAL domain superfamily XFC3_01945 4becce32456c8b8dcacabdd04699bece 522 Pfam PF00563 EAL domain 270 502 4.7E-68 T 11-10-2018 IPR001633 EAL domain XFC3_01945 4becce32456c8b8dcacabdd04699bece 522 SUPERFAMILY SSF141868 269 515 1.14E-78 T 11-10-2018 IPR035919 EAL domain superfamily XFC3_11765 544faf769792b3ccc4fc9e14d519989c 101 Pfam PF00462 Glutaredoxin 16 75 2.5E-16 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 XFC3_11765 544faf769792b3ccc4fc9e14d519989c 101 SUPERFAMILY SSF52833 6 96 6.07E-27 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_11765 544faf769792b3ccc4fc9e14d519989c 101 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 16 94 1.3E-33 T 11-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 XFC3_11765 544faf769792b3ccc4fc9e14d519989c 101 ProSitePatterns PS00195 Glutaredoxin active site. 18 34 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 XFC3_11765 544faf769792b3ccc4fc9e14d519989c 101 Gene3D G3DSA:3.40.30.10 14 100 4.5E-26 T 11-10-2018 XFC3_11765 544faf769792b3ccc4fc9e14d519989c 101 PRINTS PR00160 Glutaredoxin signature 72 85 3.6E-12 T 11-10-2018 IPR014025 Glutaredoxin subgroup XFC3_11765 544faf769792b3ccc4fc9e14d519989c 101 PRINTS PR00160 Glutaredoxin signature 16 34 3.6E-12 T 11-10-2018 IPR014025 Glutaredoxin subgroup XFC3_11765 544faf769792b3ccc4fc9e14d519989c 101 PRINTS PR00160 Glutaredoxin signature 58 71 3.6E-12 T 11-10-2018 IPR014025 Glutaredoxin subgroup XFC3_05895 3f9d90e419c163f2db2d3654eeef818a 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 226 336 7.1E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_05895 3f9d90e419c163f2db2d3654eeef818a 349 SMART SM00388 120 187 9.1E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFC3_05895 3f9d90e419c163f2db2d3654eeef818a 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 121 179 4.4E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFC3_05895 3f9d90e419c163f2db2d3654eeef818a 349 SMART SM00387 226 339 9.6E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_05895 3f9d90e419c163f2db2d3654eeef818a 349 SUPERFAMILY SSF47384 110 181 7.06E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFC3_05895 3f9d90e419c163f2db2d3654eeef818a 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 336 8.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_05895 3f9d90e419c163f2db2d3654eeef818a 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 271 285 8.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_05895 3f9d90e419c163f2db2d3654eeef818a 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 8.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_05895 3f9d90e419c163f2db2d3654eeef818a 349 Gene3D G3DSA:3.30.565.10 185 337 1.2E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_05895 3f9d90e419c163f2db2d3654eeef818a 349 Gene3D G3DSA:1.10.287.130 125 183 4.6E-11 T 11-10-2018 XFC3_05895 3f9d90e419c163f2db2d3654eeef818a 349 SUPERFAMILY SSF55874 190 336 1.57E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_02625 c249483c5786834d8893cb7b8818c354 370 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 16 367 2.4E-109 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 XFC3_02625 c249483c5786834d8893cb7b8818c354 370 Gene3D G3DSA:1.10.1740.110 179 285 1.5E-124 T 11-10-2018 XFC3_02625 c249483c5786834d8893cb7b8818c354 370 PIRSF PIRSF000443 1 370 1.4E-130 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 XFC3_02625 c249483c5786834d8893cb7b8818c354 370 SUPERFAMILY SSF53474 14 369 3.33E-86 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_02625 c249483c5786834d8893cb7b8818c354 370 Pfam PF00561 alpha/beta hydrolase fold 45 354 1.0E-26 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFC3_02625 c249483c5786834d8893cb7b8818c354 370 Gene3D G3DSA:3.40.50.1820 21 362 1.5E-124 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_02625 c249483c5786834d8893cb7b8818c354 370 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 11 368 28.936 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 XFC3_08200 4312f32b0e02d1ce6239d93cabd01810 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XFC3_08200 4312f32b0e02d1ce6239d93cabd01810 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 20 29 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XFC3_08200 4312f32b0e02d1ce6239d93cabd01810 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 350 2.7E-136 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XFC3_08200 4312f32b0e02d1ce6239d93cabd01810 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 7 349 3.3E-128 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XFC3_08200 4312f32b0e02d1ce6239d93cabd01810 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 4 352 49.373 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XFC3_08200 4312f32b0e02d1ce6239d93cabd01810 354 SUPERFAMILY SSF51726 1 353 4.01E-110 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XFC3_08200 4312f32b0e02d1ce6239d93cabd01810 354 Gene3D G3DSA:3.20.20.210 1 354 6.4E-147 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XFC3_02370 7fbacfed7bf73b0fbc18003b7b7a92df 452 Pfam PF13481 AAA domain 112 287 4.8E-28 T 11-10-2018 XFC3_02370 7fbacfed7bf73b0fbc18003b7b7a92df 452 SUPERFAMILY SSF52540 122 320 9.27E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02370 7fbacfed7bf73b0fbc18003b7b7a92df 452 Gene3D G3DSA:3.40.50.300 104 372 1.4E-36 T 11-10-2018 XFC3_05060 dcdd15380826b8916978d856a0a7d4a8 322 Gene3D G3DSA:3.30.70.1070 247 318 2.6E-10 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XFC3_05060 dcdd15380826b8916978d856a0a7d4a8 322 SUPERFAMILY SSF110997 244 316 1.7E-13 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XFC3_05060 dcdd15380826b8916978d856a0a7d4a8 322 Pfam PF05036 Sporulation related domain 101 165 5.1E-11 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 XFC3_05060 dcdd15380826b8916978d856a0a7d4a8 322 Pfam PF05036 Sporulation related domain 247 311 4.5E-14 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 XFC3_05060 dcdd15380826b8916978d856a0a7d4a8 322 SUPERFAMILY SSF110997 103 164 6.15E-7 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XFC3_08650 4f12aaab72aec3fc1045af952b67d65d 707 Gene3D G3DSA:3.90.70.10 1 136 1.7E-38 T 11-10-2018 XFC3_08650 4f12aaab72aec3fc1045af952b67d65d 707 ProSitePatterns PS00211 ABC transporters family signature. 610 624 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_08650 4f12aaab72aec3fc1045af952b67d65d 707 SMART SM00382 498 682 2.1E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_08650 4f12aaab72aec3fc1045af952b67d65d 707 Pfam PF00005 ABC transporter 489 638 6.4E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_08650 4f12aaab72aec3fc1045af952b67d65d 707 Gene3D G3DSA:1.20.1560.10 143 458 3.5E-65 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XFC3_08650 4f12aaab72aec3fc1045af952b67d65d 707 SUPERFAMILY SSF90123 138 459 6.8E-61 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XFC3_08650 4f12aaab72aec3fc1045af952b67d65d 707 Gene3D G3DSA:3.40.50.300 463 701 3.1E-76 T 11-10-2018 XFC3_08650 4f12aaab72aec3fc1045af952b67d65d 707 SUPERFAMILY SSF52540 464 685 7.48E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08650 4f12aaab72aec3fc1045af952b67d65d 707 Pfam PF03412 Peptidase C39 family 4 128 1.6E-35 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 XFC3_08650 4f12aaab72aec3fc1045af952b67d65d 707 Pfam PF00664 ABC transporter transmembrane region 159 420 1.1E-35 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XFC3_02965 1a93bf0dfb23f9f07723bc0684c3352e 308 SMART SM00450 208 303 2.5E-11 T 11-10-2018 IPR001763 Rhodanese-like domain XFC3_02965 1a93bf0dfb23f9f07723bc0684c3352e 308 SUPERFAMILY SSF89360 114 201 1.55E-11 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFC3_02965 1a93bf0dfb23f9f07723bc0684c3352e 308 SUPERFAMILY SSF52833 8 104 3.82E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_02965 1a93bf0dfb23f9f07723bc0684c3352e 308 SUPERFAMILY SSF52821 202 303 1.15E-18 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFC3_02965 1a93bf0dfb23f9f07723bc0684c3352e 308 Gene3D G3DSA:3.40.250.10 200 304 4.3E-16 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFC3_02965 1a93bf0dfb23f9f07723bc0684c3352e 308 Pfam PF00581 Rhodanese-like domain 210 298 3.4E-7 T 11-10-2018 IPR001763 Rhodanese-like domain XFC3_02965 1a93bf0dfb23f9f07723bc0684c3352e 308 Pfam PF00462 Glutaredoxin 20 84 3.2E-19 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 XFC3_02965 1a93bf0dfb23f9f07723bc0684c3352e 308 Gene3D G3DSA:3.40.30.10 10 104 3.3E-32 T 11-10-2018 XFC3_02965 1a93bf0dfb23f9f07723bc0684c3352e 308 Gene3D G3DSA:2.60.300.12 115 199 2.1E-6 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFC3_02965 1a93bf0dfb23f9f07723bc0684c3352e 308 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 9 103 4.4E-41 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related XFC3_03000 14bd2ecd0cb6134a6976cee3705adc2d 411 Gene3D G3DSA:2.40.420.20 305 374 1.6E-86 T 11-10-2018 XFC3_03000 14bd2ecd0cb6134a6976cee3705adc2d 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 374 9.2E-81 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XFC3_03000 14bd2ecd0cb6134a6976cee3705adc2d 411 SUPERFAMILY SSF111369 63 299 8.24E-56 T 11-10-2018 XFC3_03000 14bd2ecd0cb6134a6976cee3705adc2d 411 Gene3D G3DSA:1.10.287.470 108 181 1.6E-86 T 11-10-2018 XFC3_03000 14bd2ecd0cb6134a6976cee3705adc2d 411 Gene3D G3DSA:2.40.30.170 60 304 1.6E-86 T 11-10-2018 XFC3_03000 14bd2ecd0cb6134a6976cee3705adc2d 411 Gene3D G3DSA:2.40.50.100 73 215 1.6E-86 T 11-10-2018 XFC3_03000 14bd2ecd0cb6134a6976cee3705adc2d 411 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 73 294 5.4E-19 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XFC3_00425 56d2f5d13cdf3e9110ccf3eccbebadde 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 11 296 7.3E-67 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XFC3_00425 56d2f5d13cdf3e9110ccf3eccbebadde 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 10 305 1.6E-116 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 XFC3_00425 56d2f5d13cdf3e9110ccf3eccbebadde 306 PIRSF PIRSF026649 5 305 1.1E-86 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XFC3_00425 56d2f5d13cdf3e9110ccf3eccbebadde 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 305 41.268 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 XFC3_02255 b2c5c54b721c641077dffbe241525178 456 Pfam PF00571 CBS domain 344 388 2.7E-8 T 11-10-2018 IPR000644 CBS domain XFC3_02255 b2c5c54b721c641077dffbe241525178 456 Pfam PF00571 CBS domain 403 451 0.0025 T 11-10-2018 IPR000644 CBS domain XFC3_02255 b2c5c54b721c641077dffbe241525178 456 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 XFC3_02255 b2c5c54b721c641077dffbe241525178 456 SMART SM00116 343 390 5.6E-8 T 11-10-2018 IPR000644 CBS domain XFC3_02255 b2c5c54b721c641077dffbe241525178 456 Gene3D G3DSA:3.40.50.1100 40 153 3.4E-96 T 11-10-2018 XFC3_02255 b2c5c54b721c641077dffbe241525178 456 Gene3D G3DSA:3.40.50.1100 9 308 3.4E-96 T 11-10-2018 XFC3_02255 b2c5c54b721c641077dffbe241525178 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 302 1.0E-56 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XFC3_02255 b2c5c54b721c641077dffbe241525178 456 Gene3D G3DSA:3.10.580.10 338 456 1.5E-17 T 11-10-2018 XFC3_02255 b2c5c54b721c641077dffbe241525178 456 SUPERFAMILY SSF53686 4 321 8.51E-82 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XFC3_02255 b2c5c54b721c641077dffbe241525178 456 SUPERFAMILY SSF54631 340 453 1.23E-18 T 11-10-2018 XFC3_07800 4930c0bf6e62428ebdbed127cd7f78c0 411 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 405 70.609 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 XFC3_07800 4930c0bf6e62428ebdbed127cd7f78c0 411 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 401 1.0E-139 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 XFC3_07800 4930c0bf6e62428ebdbed127cd7f78c0 411 PIRSF PIRSF000521 20 159 1.1E-7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFC3_07800 4930c0bf6e62428ebdbed127cd7f78c0 411 PIRSF PIRSF000521 173 404 6.8E-33 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFC3_07800 4930c0bf6e62428ebdbed127cd7f78c0 411 SUPERFAMILY SSF53383 14 402 4.62E-120 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFC3_07800 4930c0bf6e62428ebdbed127cd7f78c0 411 Gene3D G3DSA:3.90.1150.10 23 395 6.1E-142 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFC3_07800 4930c0bf6e62428ebdbed127cd7f78c0 411 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 224 261 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFC3_07800 4930c0bf6e62428ebdbed127cd7f78c0 411 Gene3D G3DSA:3.40.640.10 58 306 6.1E-142 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFC3_07800 4930c0bf6e62428ebdbed127cd7f78c0 411 Pfam PF00202 Aminotransferase class-III 21 401 3.9E-112 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFC3_12205 24349ddd3ffd288639f57ed1b59bb560 1489 Pfam PF04898 Glutamate synthase central domain 466 749 1.0E-97 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 XFC3_12205 24349ddd3ffd288639f57ed1b59bb560 1489 Pfam PF00310 Glutamine amidotransferases class-II 24 436 7.4E-158 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain XFC3_12205 24349ddd3ffd288639f57ed1b59bb560 1489 Gene3D G3DSA:3.60.20.10 24 554 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFC3_12205 24349ddd3ffd288639f57ed1b59bb560 1489 SUPERFAMILY SSF56235 24 439 2.67E-132 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFC3_12205 24349ddd3ffd288639f57ed1b59bb560 1489 SUPERFAMILY SSF51395 455 1201 9.16E-249 T 11-10-2018 XFC3_12205 24349ddd3ffd288639f57ed1b59bb560 1489 SUPERFAMILY SSF69336 1220 1475 2.49E-83 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 XFC3_12205 24349ddd3ffd288639f57ed1b59bb560 1489 Gene3D G3DSA:2.160.20.60 1209 1479 1.1E-96 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 XFC3_12205 24349ddd3ffd288639f57ed1b59bb560 1489 Pfam PF01645 Conserved region in glutamate synthase 805 1167 2.1E-148 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 XFC3_12205 24349ddd3ffd288639f57ed1b59bb560 1489 Gene3D G3DSA:3.20.20.70 492 1183 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_12205 24349ddd3ffd288639f57ed1b59bb560 1489 Gene3D G3DSA:3.20.20.70 441 804 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_12205 24349ddd3ffd288639f57ed1b59bb560 1489 Pfam PF01493 GXGXG motif 1246 1428 3.0E-74 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 XFC3_08495 589595718f2c6e51cc27479d9730686d 273 Pfam PF03618 Kinase/pyrophosphorylase 7 263 2.0E-69 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 XFC3_08495 589595718f2c6e51cc27479d9730686d 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 4 272 72.493 T 11-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein XFC3_10600 5d8f0656ba4c9bbbcee27bea18ec123d 170 Gene3D G3DSA:1.25.40.10 32 162 2.7E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_10600 5d8f0656ba4c9bbbcee27bea18ec123d 170 SUPERFAMILY SSF48452 62 158 1.97E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 111 135 6.7E-8 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 484 509 2.0E-4 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 140 165 8.4E-5 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 412 437 1.9E-4 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 238 264 9.0E-6 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 582 608 3.4E-5 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Gene3D G3DSA:3.30.1300.30 896 1004 6.5E-16 T 11-10-2018 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Gene3D G3DSA:1.20.5.170 706 793 1.3E-15 T 11-10-2018 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Gene3D G3DSA:2.150.10.10 579 705 6.7E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 SUPERFAMILY SSF54523 882 1004 4.39E-12 T 11-10-2018 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 SUPERFAMILY SSF101967 408 554 5.49E-25 T 11-10-2018 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 SUPERFAMILY SSF101967 233 383 2.09E-25 T 11-10-2018 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 703 743 6.4E-8 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 361 399 8.5E-5 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 188 224 1.7E-4 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 532 570 4.1E-5 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 SUPERFAMILY SSF101967 576 728 4.05E-27 T 11-10-2018 XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Gene3D G3DSA:2.150.10.10 51 218 1.1E-23 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Gene3D G3DSA:2.150.10.10 392 564 2.8E-28 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Gene3D G3DSA:2.150.10.10 219 391 2.1E-28 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 Pfam PF03895 YadA-like membrane anchor domain 952 1004 1.0E-9 T 11-10-2018 IPR005594 YadA-like, C-terminal XFC3_07130 b44fc5d73601c8a70f037f08f42b51f1 1004 SUPERFAMILY SSF101967 109 210 1.44E-20 T 11-10-2018 XFC3_01875 a3664fae0ce773d70ebcda91b7e32cc4 379 Gene3D G3DSA:3.30.479.30 94 225 5.7E-18 T 11-10-2018 XFC3_01875 a3664fae0ce773d70ebcda91b7e32cc4 379 PRINTS PR00721 Stomatin signature 118 139 2.3E-9 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFC3_01875 a3664fae0ce773d70ebcda91b7e32cc4 379 PRINTS PR00721 Stomatin signature 70 92 2.3E-9 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFC3_01875 a3664fae0ce773d70ebcda91b7e32cc4 379 PRINTS PR00721 Stomatin signature 153 170 2.3E-9 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFC3_01875 a3664fae0ce773d70ebcda91b7e32cc4 379 PRINTS PR00721 Stomatin signature 199 217 2.3E-9 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFC3_01875 a3664fae0ce773d70ebcda91b7e32cc4 379 Pfam PF01145 SPFH domain / Band 7 family 68 238 4.8E-29 T 11-10-2018 IPR001107 Band 7 domain XFC3_01875 a3664fae0ce773d70ebcda91b7e32cc4 379 SUPERFAMILY SSF117892 96 230 2.48E-20 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily XFC3_01875 a3664fae0ce773d70ebcda91b7e32cc4 379 SMART SM00244 63 223 8.2E-35 T 11-10-2018 IPR001107 Band 7 domain XFC3_01875 a3664fae0ce773d70ebcda91b7e32cc4 379 TIGRFAM TIGR01933 hflK: HflK protein 65 322 8.3E-106 T 11-10-2018 IPR010201 HflK GO:0016021 XFC3_01620 d36c9dbc00b64caa60cbc2160baf2869 681 Gene3D G3DSA:2.170.130.10 64 182 8.7E-27 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFC3_01620 d36c9dbc00b64caa60cbc2160baf2869 681 Pfam PF00593 TonB dependent receptor 240 678 5.3E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFC3_01620 d36c9dbc00b64caa60cbc2160baf2869 681 SUPERFAMILY SSF56935 55 681 4.76E-83 T 11-10-2018 XFC3_01620 d36c9dbc00b64caa60cbc2160baf2869 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 173 2.2E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFC3_01620 d36c9dbc00b64caa60cbc2160baf2869 681 Gene3D G3DSA:2.40.170.20 188 681 3.2E-47 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XFC3_02970 7467c19f1a9ccf4e5cb9ce245e3aa6d9 205 SUPERFAMILY SSF51445 4 203 1.11E-49 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFC3_02970 7467c19f1a9ccf4e5cb9ce245e3aa6d9 205 Gene3D G3DSA:3.20.20.80 2 204 3.2E-51 T 11-10-2018 XFC3_02970 7467c19f1a9ccf4e5cb9ce245e3aa6d9 205 Pfam PF01183 Glycosyl hydrolases family 25 6 194 2.0E-37 T 11-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 XFC3_00885 39dcef9bc616a9c420b21e3edb9d0bd7 491 SUPERFAMILY SSF56322 16 484 4.32E-154 T 11-10-2018 IPR005801 ADC synthase GO:0009058 XFC3_00885 39dcef9bc616a9c420b21e3edb9d0bd7 491 Pfam PF00425 chorismate binding enzyme 223 476 5.9E-96 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal XFC3_00885 39dcef9bc616a9c420b21e3edb9d0bd7 491 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 170 1.7E-26 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_00885 39dcef9bc616a9c420b21e3edb9d0bd7 491 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 27 484 3.1E-164 T 11-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_00885 39dcef9bc616a9c420b21e3edb9d0bd7 491 PRINTS PR00095 Anthranilate synthase component I signature 324 337 2.8E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_00885 39dcef9bc616a9c420b21e3edb9d0bd7 491 PRINTS PR00095 Anthranilate synthase component I signature 418 432 2.8E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_00885 39dcef9bc616a9c420b21e3edb9d0bd7 491 PRINTS PR00095 Anthranilate synthase component I signature 433 447 2.8E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_00885 39dcef9bc616a9c420b21e3edb9d0bd7 491 PRINTS PR00095 Anthranilate synthase component I signature 338 351 2.8E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_00885 39dcef9bc616a9c420b21e3edb9d0bd7 491 Gene3D G3DSA:3.60.120.10 2 490 2.3E-172 T 11-10-2018 IPR005801 ADC synthase GO:0009058 XFC3_11155 c12d07967651c43a08d7a1bf8c008773 351 Pfam PF01728 FtsJ-like methyltransferase 184 242 8.0E-6 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 XFC3_11155 c12d07967651c43a08d7a1bf8c008773 351 Gene3D G3DSA:3.40.50.150 174 349 2.8E-52 T 11-10-2018 XFC3_11155 c12d07967651c43a08d7a1bf8c008773 351 Gene3D G3DSA:3.30.2300.20 79 173 6.7E-23 T 11-10-2018 XFC3_11155 c12d07967651c43a08d7a1bf8c008773 351 PIRSF PIRSF028774 1 351 4.8E-160 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 XFC3_11155 c12d07967651c43a08d7a1bf8c008773 351 Gene3D G3DSA:3.30.70.2810 1 78 1.7E-18 T 11-10-2018 XFC3_11155 c12d07967651c43a08d7a1bf8c008773 351 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 349 67.866 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 XFC3_11155 c12d07967651c43a08d7a1bf8c008773 351 SUPERFAMILY SSF53335 183 293 1.44E-13 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_07235 e66f5805367da0c10d7f49e06cda15ec 295 Gene3D G3DSA:1.25.40.10 180 290 2.1E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_07235 e66f5805367da0c10d7f49e06cda15ec 295 SMART SM00028 241 274 8.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_07235 e66f5805367da0c10d7f49e06cda15ec 295 SMART SM00028 207 240 22.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_07235 e66f5805367da0c10d7f49e06cda15ec 295 SUPERFAMILY SSF48452 206 281 2.74E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_07235 e66f5805367da0c10d7f49e06cda15ec 295 Pfam PF13371 Tetratricopeptide repeat 213 284 5.6E-22 T 11-10-2018 XFC3_07235 e66f5805367da0c10d7f49e06cda15ec 295 Pfam PF13369 Transglutaminase-like superfamily 64 211 2.6E-46 T 11-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 XFC3_10940 1566fe4cdcdebaf7a21719567c8bd028 468 Pfam PF01225 Mur ligase family, catalytic domain 26 94 1.5E-4 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XFC3_10940 1566fe4cdcdebaf7a21719567c8bd028 468 Gene3D G3DSA:3.40.1190.10 82 316 9.8E-66 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFC3_10940 1566fe4cdcdebaf7a21719567c8bd028 468 SUPERFAMILY SSF63418 3 95 2.22E-20 T 11-10-2018 IPR035911 MurE/MurF, N-terminal XFC3_10940 1566fe4cdcdebaf7a21719567c8bd028 468 SUPERFAMILY SSF53623 103 314 1.07E-50 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFC3_10940 1566fe4cdcdebaf7a21719567c8bd028 468 Gene3D G3DSA:3.90.190.20 319 461 6.6E-32 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFC3_10940 1566fe4cdcdebaf7a21719567c8bd028 468 Pfam PF08245 Mur ligase middle domain 107 300 2.6E-41 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XFC3_10940 1566fe4cdcdebaf7a21719567c8bd028 468 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 398 8.9E-8 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XFC3_10940 1566fe4cdcdebaf7a21719567c8bd028 468 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 458 30.355 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_10940 1566fe4cdcdebaf7a21719567c8bd028 468 Gene3D G3DSA:3.40.1390.10 1 81 1.1E-20 T 11-10-2018 XFC3_10940 1566fe4cdcdebaf7a21719567c8bd028 468 SUPERFAMILY SSF53244 320 457 2.98E-29 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFC3_10940 1566fe4cdcdebaf7a21719567c8bd028 468 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 457 2.0E-134 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 604 7.1E-281 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 SUPERFAMILY SSF50447 153 300 7.9E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 Gene3D G3DSA:3.30.70.240 394 487 1.9E-123 T 11-10-2018 XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 Gene3D G3DSA:3.40.50.300 2 199 5.6E-67 T 11-10-2018 XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 SUPERFAMILY SSF52540 3 208 3.02E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 156 1.2E-26 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 Gene3D G3DSA:3.30.70.870 307 595 1.9E-123 T 11-10-2018 XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 SUPERFAMILY SSF54980 303 392 3.6E-15 T 11-10-2018 IPR035647 EF-G domain III/V-like XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 PRINTS PR00315 GTP-binding elongation factor signature 88 99 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 PRINTS PR00315 GTP-binding elongation factor signature 52 60 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 PRINTS PR00315 GTP-binding elongation factor signature 124 133 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 PRINTS PR00315 GTP-binding elongation factor signature 72 82 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 PRINTS PR00315 GTP-binding elongation factor signature 8 21 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 Pfam PF00679 Elongation factor G C-terminus 401 479 4.7E-20 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 Gene3D G3DSA:2.40.50.250 488 604 1.9E-123 T 11-10-2018 XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 SUPERFAMILY SSF54980 403 517 7.19E-26 T 11-10-2018 IPR035647 EF-G domain III/V-like XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 Gene3D G3DSA:2.40.30.10 200 300 1.5E-32 T 11-10-2018 XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 Pfam PF00009 Elongation factor Tu GTP binding domain 5 196 5.1E-56 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 SMART SM00838 400 489 0.0047 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like XFC3_08670 ca30dc1c76c9b50565c009b085a5b2e1 609 Pfam PF03144 Elongation factor Tu domain 2 223 290 4.6E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XFC3_08885 07da55ad3051ac3cce0aae151835006c 175 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 152 160 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08885 07da55ad3051ac3cce0aae151835006c 175 Gene3D G3DSA:3.90.930.12 81 175 1.1E-37 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08885 07da55ad3051ac3cce0aae151835006c 175 Gene3D G3DSA:3.90.930.12 1 80 5.9E-21 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08885 07da55ad3051ac3cce0aae151835006c 175 PRINTS PR00059 Ribosomal protein L6 signature 139 160 2.3E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XFC3_08885 07da55ad3051ac3cce0aae151835006c 175 PRINTS PR00059 Ribosomal protein L6 signature 69 94 2.3E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XFC3_08885 07da55ad3051ac3cce0aae151835006c 175 PRINTS PR00059 Ribosomal protein L6 signature 97 113 2.3E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XFC3_08885 07da55ad3051ac3cce0aae151835006c 175 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 174 36.121 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XFC3_08885 07da55ad3051ac3cce0aae151835006c 175 SUPERFAMILY SSF56053 81 174 2.19E-34 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08885 07da55ad3051ac3cce0aae151835006c 175 SUPERFAMILY SSF56053 1 80 1.77E-18 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08885 07da55ad3051ac3cce0aae151835006c 175 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 174 9.0E-68 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XFC3_08885 07da55ad3051ac3cce0aae151835006c 175 Pfam PF00347 Ribosomal protein L6 11 79 7.6E-13 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08885 07da55ad3051ac3cce0aae151835006c 175 Pfam PF00347 Ribosomal protein L6 88 162 9.1E-20 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08885 07da55ad3051ac3cce0aae151835006c 175 PIRSF PIRSF002162 1 175 7.5E-46 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_09080 c4a9a7991465c765935fd2c54aeb58ea 275 Gene3D G3DSA:3.20.20.220 1 275 1.1E-93 T 11-10-2018 XFC3_09080 c4a9a7991465c765935fd2c54aeb58ea 275 SUPERFAMILY SSF51730 3 274 3.53E-87 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like XFC3_09080 c4a9a7991465c765935fd2c54aeb58ea 275 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 4 273 1.1E-97 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 XFC3_09080 c4a9a7991465c765935fd2c54aeb58ea 275 Pfam PF02219 Methylenetetrahydrofolate reductase 4 274 7.7E-83 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 XFC3_03320 b3dcfc7f48ed5c2a3dfe0eaa1f412784 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 121 6.0E-7 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain XFC3_03320 b3dcfc7f48ed5c2a3dfe0eaa1f412784 127 Gene3D G3DSA:3.10.180.10 6 127 1.7E-33 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XFC3_03320 b3dcfc7f48ed5c2a3dfe0eaa1f412784 127 SUPERFAMILY SSF54593 1 121 5.5E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XFC3_04890 c757554f33ff3325480138086042610b 836 TIGRFAM TIGR02063 RNase_R: ribonuclease R 108 805 4.1E-269 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 XFC3_04890 c757554f33ff3325480138086042610b 836 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 166 804 1.5E-210 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 XFC3_04890 c757554f33ff3325480138086042610b 836 Gene3D G3DSA:2.40.50.140 164 235 1.2E-19 T 11-10-2018 XFC3_04890 c757554f33ff3325480138086042610b 836 Gene3D G3DSA:2.40.50.140 725 831 6.6E-22 T 11-10-2018 XFC3_04890 c757554f33ff3325480138086042610b 836 SUPERFAMILY SSF50249 154 234 1.32E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_04890 c757554f33ff3325480138086042610b 836 Pfam PF00575 S1 RNA binding domain 722 801 2.5E-12 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFC3_04890 c757554f33ff3325480138086042610b 836 SMART SM00357 173 232 1.0E-14 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 XFC3_04890 c757554f33ff3325480138086042610b 836 Pfam PF00773 RNB domain 347 674 3.6E-104 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 XFC3_04890 c757554f33ff3325480138086042610b 836 Pfam PF08206 Ribonuclease B OB domain 174 231 7.2E-24 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain XFC3_04890 c757554f33ff3325480138086042610b 836 SMART SM00955 347 675 1.1E-174 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 XFC3_04890 c757554f33ff3325480138086042610b 836 SMART SM00316 721 804 6.1E-14 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFC3_04890 c757554f33ff3325480138086042610b 836 Hamap MF_01895 Ribonuclease R [rnr]. 127 804 56.406 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 XFC3_04890 c757554f33ff3325480138086042610b 836 SUPERFAMILY SSF50249 225 324 3.04E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_04890 c757554f33ff3325480138086042610b 836 SUPERFAMILY SSF50249 723 803 4.85E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_04890 c757554f33ff3325480138086042610b 836 SUPERFAMILY SSF50249 312 721 1.71E-135 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_04890 c757554f33ff3325480138086042610b 836 ProSitePatterns PS01175 Ribonuclease II family signature. 642 666 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site XFC3_11065 07c87cceb8d04b1cd37e1b09081097cc 326 SUPERFAMILY SSF55298 225 323 1.63E-5 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XFC3_11065 07c87cceb8d04b1cd37e1b09081097cc 326 Gene3D G3DSA:3.30.1330.40 207 325 1.2E-10 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XFC3_04515 46ec147114e3e206b7786ecc68651366 344 Pfam PF00089 Trypsin 142 314 7.8E-5 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 XFC3_04515 46ec147114e3e206b7786ecc68651366 344 Gene3D G3DSA:2.40.10.10 225 339 8.0E-11 T 11-10-2018 XFC3_04515 46ec147114e3e206b7786ecc68651366 344 Gene3D G3DSA:2.40.10.10 120 224 3.5E-12 T 11-10-2018 XFC3_04515 46ec147114e3e206b7786ecc68651366 344 SUPERFAMILY SSF50494 119 329 1.38E-17 T 11-10-2018 IPR009003 Peptidase S1, PA clan XFC3_09310 304485f8cbce5b709b048f66f9ffe356 239 SUPERFAMILY SSF100950 10 232 3.23E-44 T 11-10-2018 IPR037171 NagB/RpiA transferase-like XFC3_09310 304485f8cbce5b709b048f66f9ffe356 239 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 225 2.0E-44 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 XFC3_09310 304485f8cbce5b709b048f66f9ffe356 239 Gene3D G3DSA:3.40.50.1360 6 239 1.7E-51 T 11-10-2018 XFC3_04265 34291de4f619b7247a1def320012bf28 788 SUPERFAMILY SSF56935 34 788 1.65E-96 T 11-10-2018 XFC3_04265 34291de4f619b7247a1def320012bf28 788 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 169 1.1E-23 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFC3_04265 34291de4f619b7247a1def320012bf28 788 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 11-10-2018 IPR010916 TonB box, conserved site XFC3_04265 34291de4f619b7247a1def320012bf28 788 Gene3D G3DSA:2.170.130.10 29 173 1.2E-35 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFC3_04265 34291de4f619b7247a1def320012bf28 788 Gene3D G3DSA:2.40.170.20 177 762 2.5E-53 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XFC3_04265 34291de4f619b7247a1def320012bf28 788 Pfam PF00593 TonB dependent receptor 280 770 1.5E-44 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFC3_09120 107bd72f83861828f615f0cae37b7f71 384 SMART SM00448 28 143 7.8E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_09120 107bd72f83861828f615f0cae37b7f71 384 SUPERFAMILY SSF52172 28 183 4.41E-34 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_09120 107bd72f83861828f615f0cae37b7f71 384 Pfam PF13487 HD domain 247 310 2.3E-18 T 11-10-2018 XFC3_09120 107bd72f83861828f615f0cae37b7f71 384 SUPERFAMILY SSF109604 170 357 2.63E-38 T 11-10-2018 XFC3_09120 107bd72f83861828f615f0cae37b7f71 384 SMART SM00471 195 329 3.1E-5 T 11-10-2018 IPR003607 HD/PDEase domain XFC3_09120 107bd72f83861828f615f0cae37b7f71 384 Pfam PF00072 Response regulator receiver domain 30 143 9.1E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_09120 107bd72f83861828f615f0cae37b7f71 384 Gene3D G3DSA:1.10.3210.10 171 372 1.3E-66 T 11-10-2018 XFC3_09120 107bd72f83861828f615f0cae37b7f71 384 Gene3D G3DSA:3.40.50.2300 16 163 9.8E-33 T 11-10-2018 XFC3_07020 8ca0b6fe4d4903a69b5f6d197cf14991 264 Pfam PF02675 S-adenosylmethionine decarboxylase 43 170 8.4E-31 T 11-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XFC3_07020 8ca0b6fe4d4903a69b5f6d197cf14991 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 153.661 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XFC3_07020 8ca0b6fe4d4903a69b5f6d197cf14991 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 262 3.9E-142 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XFC3_07020 8ca0b6fe4d4903a69b5f6d197cf14991 264 Gene3D G3DSA:3.60.90.10 103 187 9.6E-7 T 11-10-2018 XFC3_07020 8ca0b6fe4d4903a69b5f6d197cf14991 264 Gene3D G3DSA:3.30.360.110 43 88 3.1E-5 T 11-10-2018 XFC3_07020 8ca0b6fe4d4903a69b5f6d197cf14991 264 SUPERFAMILY SSF56276 47 175 1.88E-24 T 11-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 XFC3_07020 8ca0b6fe4d4903a69b5f6d197cf14991 264 PIRSF PIRSF001356 2 264 2.0E-147 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XFC3_04615 663d4dfa42f8b3fbab8a6c6d776a3c42 257 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 14 257 1.3E-49 T 11-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ XFC3_04615 663d4dfa42f8b3fbab8a6c6d776a3c42 257 SUPERFAMILY SSF101082 31 226 1.24E-32 T 11-10-2018 XFC3_04615 663d4dfa42f8b3fbab8a6c6d776a3c42 257 Pfam PF07996 Type IV secretion system proteins 31 166 5.0E-6 T 11-10-2018 IPR014158 Type IV secretion system, VirB5 XFC3_09290 008788ce5c9a41ab32d18c216763b97b 267 Gene3D G3DSA:3.30.70.1400 1 85 2.3E-17 T 11-10-2018 XFC3_09290 008788ce5c9a41ab32d18c216763b97b 267 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 182 241 3.7E-5 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 XFC3_09290 008788ce5c9a41ab32d18c216763b97b 267 SUPERFAMILY SSF103025 2 198 2.98E-42 T 11-10-2018 XFC3_09290 008788ce5c9a41ab32d18c216763b97b 267 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 143 206 1.5E-21 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site XFC3_09290 008788ce5c9a41ab32d18c216763b97b 267 Gene3D G3DSA:2.40.30.160 152 252 4.4E-22 T 11-10-2018 XFC3_03175 54039d6cce00ef4917ae14ca48a2ec7e 373 Pfam PF02153 Prephenate dehydrogenase 46 251 2.4E-25 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 XFC3_03175 54039d6cce00ef4917ae14ca48a2ec7e 373 SUPERFAMILY SSF48179 154 254 7.03E-18 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XFC3_03175 54039d6cce00ef4917ae14ca48a2ec7e 373 Gene3D G3DSA:1.10.3660.10 161 275 3.8E-12 T 11-10-2018 XFC3_03175 54039d6cce00ef4917ae14ca48a2ec7e 373 Gene3D G3DSA:3.40.50.720 2 159 4.0E-29 T 11-10-2018 XFC3_03175 54039d6cce00ef4917ae14ca48a2ec7e 373 Gene3D G3DSA:3.30.70.260 296 365 3.8E-8 T 11-10-2018 XFC3_03175 54039d6cce00ef4917ae14ca48a2ec7e 373 SUPERFAMILY SSF51735 7 151 1.97E-23 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_03175 54039d6cce00ef4917ae14ca48a2ec7e 373 SUPERFAMILY SSF55021 296 360 1.66E-8 T 11-10-2018 XFC3_09885 6ef360e7dc87b1d44b40680f0af26c57 473 Pfam PF00176 SNF2 family N-terminal domain 25 265 1.4E-15 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 XFC3_09885 6ef360e7dc87b1d44b40680f0af26c57 473 SUPERFAMILY SSF52540 117 457 8.56E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_09885 6ef360e7dc87b1d44b40680f0af26c57 473 SMART SM00487 2 188 2.6E-5 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_09885 6ef360e7dc87b1d44b40680f0af26c57 473 Gene3D G3DSA:3.40.50.10810 4 224 8.0E-23 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily XFC3_09885 6ef360e7dc87b1d44b40680f0af26c57 473 SUPERFAMILY SSF52540 2 202 5.7E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_09885 6ef360e7dc87b1d44b40680f0af26c57 473 Gene3D G3DSA:3.40.50.300 244 471 8.4E-17 T 11-10-2018 XFC3_09615 5677d53ede54757df1f6689252ec610e 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XFC3_09615 5677d53ede54757df1f6689252ec610e 94 Gene3D G3DSA:3.30.70.20 2 81 2.2E-30 T 11-10-2018 XFC3_09615 5677d53ede54757df1f6689252ec610e 94 SUPERFAMILY SSF54862 7 67 2.54E-18 T 11-10-2018 XFC3_09615 5677d53ede54757df1f6689252ec610e 94 Pfam PF00037 4Fe-4S binding domain 7 25 4.9E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XFC3_02105 cc509a03397b7bd3b955bd69d7bfa8ac 320 Gene3D G3DSA:3.40.50.1400 163 300 2.0E-87 T 11-10-2018 XFC3_02105 cc509a03397b7bd3b955bd69d7bfa8ac 320 Gene3D G3DSA:3.40.50.1400 7 318 2.0E-87 T 11-10-2018 XFC3_02105 cc509a03397b7bd3b955bd69d7bfa8ac 320 Pfam PF00762 Ferrochelatase 7 318 4.6E-100 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XFC3_02105 cc509a03397b7bd3b955bd69d7bfa8ac 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 319 35.77 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XFC3_02105 cc509a03397b7bd3b955bd69d7bfa8ac 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XFC3_02105 cc509a03397b7bd3b955bd69d7bfa8ac 320 TIGRFAM TIGR00109 hemH: ferrochelatase 5 315 1.5E-88 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XFC3_02105 cc509a03397b7bd3b955bd69d7bfa8ac 320 SUPERFAMILY SSF53800 5 319 1.96E-92 T 11-10-2018 XFC3_08990 c1296956287eb8cabcd89cb69ffd2ecf 287 Pfam PF00231 ATP synthase 5 286 3.0E-93 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08990 c1296956287eb8cabcd89cb69ffd2ecf 287 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 7.5E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08990 c1296956287eb8cabcd89cb69ffd2ecf 287 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 7.5E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08990 c1296956287eb8cabcd89cb69ffd2ecf 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 7.5E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08990 c1296956287eb8cabcd89cb69ffd2ecf 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 7.5E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08990 c1296956287eb8cabcd89cb69ffd2ecf 287 Gene3D G3DSA:1.10.287.80 6 283 1.0E-105 T 11-10-2018 XFC3_08990 c1296956287eb8cabcd89cb69ffd2ecf 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08990 c1296956287eb8cabcd89cb69ffd2ecf 287 Gene3D G3DSA:3.40.1380.10 61 206 1.0E-105 T 11-10-2018 XFC3_08990 c1296956287eb8cabcd89cb69ffd2ecf 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 35.747 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08990 c1296956287eb8cabcd89cb69ffd2ecf 287 SUPERFAMILY SSF52943 2 287 1.83E-91 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_08990 c1296956287eb8cabcd89cb69ffd2ecf 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 3.0E-104 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFC3_06665 b5fe0b36d21691308fb11ea1ee42dc23 224 SUPERFAMILY SSF53474 13 219 1.26E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_06665 b5fe0b36d21691308fb11ea1ee42dc23 224 Pfam PF02230 Phospholipase/Carboxylesterase 14 217 1.2E-43 T 11-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 XFC3_06665 b5fe0b36d21691308fb11ea1ee42dc23 224 Gene3D G3DSA:3.40.50.1820 3 220 2.9E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_00775 5cdcbc92609de7449c8e5f36995bfbff 131 Pfam PF01597 Glycine cleavage H-protein 8 128 6.7E-44 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate XFC3_00775 5cdcbc92609de7449c8e5f36995bfbff 131 SUPERFAMILY SSF51230 4 127 5.63E-44 T 11-10-2018 IPR011053 Single hybrid motif XFC3_00775 5cdcbc92609de7449c8e5f36995bfbff 131 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XFC3_00775 5cdcbc92609de7449c8e5f36995bfbff 131 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 129 1.6E-48 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 XFC3_00775 5cdcbc92609de7449c8e5f36995bfbff 131 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 39.253 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 XFC3_00775 5cdcbc92609de7449c8e5f36995bfbff 131 Gene3D G3DSA:2.40.50.100 2 131 4.0E-48 T 11-10-2018 XFC3_00220 ff48b59260e00478d14871ca73350b1e 397 Gene3D G3DSA:3.40.50.80 260 394 3.7E-30 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XFC3_00220 ff48b59260e00478d14871ca73350b1e 397 SUPERFAMILY SSF46458 5 139 2.0E-35 T 11-10-2018 IPR009050 Globin-like superfamily XFC3_00220 ff48b59260e00478d14871ca73350b1e 397 SUPERFAMILY SSF63380 152 256 9.02E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XFC3_00220 ff48b59260e00478d14871ca73350b1e 397 Pfam PF00175 Oxidoreductase NAD-binding domain 267 368 1.6E-16 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 XFC3_00220 ff48b59260e00478d14871ca73350b1e 397 PRINTS PR00409 Phthalate dioxygenase reductase family signature 266 285 6.2E-11 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 XFC3_00220 ff48b59260e00478d14871ca73350b1e 397 PRINTS PR00409 Phthalate dioxygenase reductase family signature 229 243 6.2E-11 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 XFC3_00220 ff48b59260e00478d14871ca73350b1e 397 PRINTS PR00409 Phthalate dioxygenase reductase family signature 181 191 6.2E-11 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 XFC3_00220 ff48b59260e00478d14871ca73350b1e 397 Pfam PF00042 Globin 10 105 4.5E-8 T 11-10-2018 IPR000971 Globin GO:0020037 XFC3_00220 ff48b59260e00478d14871ca73350b1e 397 Gene3D G3DSA:1.10.490.10 5 145 1.1E-47 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 XFC3_00220 ff48b59260e00478d14871ca73350b1e 397 Hamap MF_01252 Flavohemoprotein [hmp]. 4 394 51.267 T 11-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 XFC3_00220 ff48b59260e00478d14871ca73350b1e 397 Pfam PF00970 Oxidoreductase FAD-binding domain 162 255 9.0E-5 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 XFC3_00220 ff48b59260e00478d14871ca73350b1e 397 SUPERFAMILY SSF52343 262 391 4.32E-32 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XFC3_00220 ff48b59260e00478d14871ca73350b1e 397 Gene3D G3DSA:2.40.30.10 154 256 5.7E-29 T 11-10-2018 XFC3_06210 ef1abc845d8fc1438467b42edf4168e7 186 Pfam PF11198 Protein of unknown function (DUF2857) 8 182 2.3E-62 T 11-10-2018 IPR021364 Protein of unknown function DUF2857 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 Gene3D G3DSA:3.30.499.10 333 474 2.8E-48 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 Gene3D G3DSA:3.30.499.20 6 292 2.1E-95 T 11-10-2018 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 Pfam PF00330 Aconitase family (aconitate hydratase) 9 464 4.2E-155 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 PRINTS PR00415 Aconitase family signature 139 154 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 PRINTS PR00415 Aconitase family signature 201 214 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 PRINTS PR00415 Aconitase family signature 125 138 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 PRINTS PR00415 Aconitase family signature 349 360 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 PRINTS PR00415 Aconitase family signature 406 419 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 PRINTS PR00415 Aconitase family signature 215 228 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 PRINTS PR00415 Aconitase family signature 88 101 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 PRINTS PR00415 Aconitase family signature 114 122 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 PRINTS PR00415 Aconitase family signature 292 306 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 473 61.223 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 3.5E-234 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 XFC3_03020 83540d40a0b7f7067fde4a550a9ff29c 474 SUPERFAMILY SSF53732 3 472 3.53E-161 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 XFC3_04630 a6c6c80eb1fc56cc77f4dba7a9e79c68 202 SUPERFAMILY SSF53955 8 124 3.75E-24 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_07625 9bc1af4aff8d659880acbece3972c62d 284 SUPERFAMILY SSF88713 21 250 3.95E-41 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XFC3_07625 9bc1af4aff8d659880acbece3972c62d 284 Gene3D G3DSA:3.20.20.370 1 251 1.4E-60 T 11-10-2018 XFC3_07625 9bc1af4aff8d659880acbece3972c62d 284 Pfam PF01522 Polysaccharide deacetylase 56 223 3.7E-38 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XFC3_10955 ff90803cb2d041db1e2b10ef0fde7abd 87 Pfam PF04999 Cell division protein FtsL 5 87 1.3E-25 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 XFC3_10955 ff90803cb2d041db1e2b10ef0fde7abd 87 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 4 85 1.0E-23 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 XFC3_10955 ff90803cb2d041db1e2b10ef0fde7abd 87 Hamap MF_00910 Cell division protein FtsL [ftsL]. 2 85 16.566 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 XFC3_08810 af4b2d7f4a9ed89390cf0e3db449b0b8 430 SUPERFAMILY SSF52413 315 426 3.79E-24 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 XFC3_08810 af4b2d7f4a9ed89390cf0e3db449b0b8 430 Gene3D G3DSA:3.40.50.720 207 429 1.3E-52 T 11-10-2018 XFC3_08810 af4b2d7f4a9ed89390cf0e3db449b0b8 430 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 323 421 2.5E-20 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFC3_08810 af4b2d7f4a9ed89390cf0e3db449b0b8 430 SUPERFAMILY SSF51735 13 196 4.96E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_08810 af4b2d7f4a9ed89390cf0e3db449b0b8 430 PIRSF PIRSF500136 2 430 6.6E-151 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 XFC3_08810 af4b2d7f4a9ed89390cf0e3db449b0b8 430 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 208 296 4.5E-23 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFC3_08810 af4b2d7f4a9ed89390cf0e3db449b0b8 430 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 13 186 1.6E-29 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFC3_08810 af4b2d7f4a9ed89390cf0e3db449b0b8 430 Gene3D G3DSA:3.40.50.720 3 203 4.4E-55 T 11-10-2018 XFC3_08810 af4b2d7f4a9ed89390cf0e3db449b0b8 430 SMART SM00984 323 423 2.7E-32 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFC3_08810 af4b2d7f4a9ed89390cf0e3db449b0b8 430 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 13 418 2.3E-110 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XFC3_08810 af4b2d7f4a9ed89390cf0e3db449b0b8 430 PIRSF PIRSF000124 12 428 1.0E-47 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XFC3_08810 af4b2d7f4a9ed89390cf0e3db449b0b8 430 SUPERFAMILY SSF48179 206 297 1.68E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XFC3_05530 f9f504db54131c8efbbb372af6ba88a6 532 Pfam PF03572 Peptidase family S41 350 503 4.6E-23 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XFC3_05530 f9f504db54131c8efbbb372af6ba88a6 532 Pfam PF14684 Tricorn protease C1 domain 44 102 2.6E-8 T 11-10-2018 IPR028204 Tricorn protease C1 domain XFC3_05530 f9f504db54131c8efbbb372af6ba88a6 532 Gene3D G3DSA:2.30.42.10 263 330 1.1E-31 T 11-10-2018 XFC3_05530 f9f504db54131c8efbbb372af6ba88a6 532 Gene3D G3DSA:2.30.42.10 127 166 1.9E-6 T 11-10-2018 XFC3_05530 f9f504db54131c8efbbb372af6ba88a6 532 Gene3D G3DSA:3.30.750.44 466 480 1.1E-31 T 11-10-2018 XFC3_05530 f9f504db54131c8efbbb372af6ba88a6 532 Gene3D G3DSA:3.30.750.44 46 126 1.9E-6 T 11-10-2018 XFC3_05530 f9f504db54131c8efbbb372af6ba88a6 532 SUPERFAMILY SSF52096 41 524 1.19E-48 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFC3_05530 f9f504db54131c8efbbb372af6ba88a6 532 SMART SM00245 318 505 9.0E-14 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XFC3_05530 f9f504db54131c8efbbb372af6ba88a6 532 Gene3D G3DSA:3.90.226.10 331 502 1.1E-31 T 11-10-2018 XFC3_01670 b68629e40d642c30b3e47652420c7754 154 Pfam PF00210 Ferritin-like domain 8 144 3.0E-37 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 XFC3_01670 b68629e40d642c30b3e47652420c7754 154 SUPERFAMILY SSF47240 1 152 1.24E-51 T 11-10-2018 IPR009078 Ferritin-like superfamily XFC3_01670 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 65 85 4.7E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFC3_01670 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 44 64 4.7E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFC3_01670 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 128 149 4.7E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFC3_01670 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 107 127 4.7E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFC3_01670 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 3 22 4.7E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFC3_01670 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 23 43 4.7E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFC3_01670 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 86 106 4.7E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFC3_01670 b68629e40d642c30b3e47652420c7754 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 151 9.6E-70 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFC3_01670 b68629e40d642c30b3e47652420c7754 154 Gene3D G3DSA:1.20.1260.10 1 154 2.7E-66 T 11-10-2018 IPR012347 Ferritin-like XFC3_01670 b68629e40d642c30b3e47652420c7754 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFC3_01670 b68629e40d642c30b3e47652420c7754 154 PIRSF PIRSF002560 1 154 2.7E-69 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFC3_00755 8a2ad0e0f1d5b9363171c9dedc9ed45b 337 Pfam PF00535 Glycosyl transferase family 2 7 169 7.4E-25 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XFC3_00755 8a2ad0e0f1d5b9363171c9dedc9ed45b 337 SUPERFAMILY SSF53448 6 260 2.72E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_00755 8a2ad0e0f1d5b9363171c9dedc9ed45b 337 Gene3D G3DSA:3.90.550.10 2 207 2.1E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_00730 ba8c7d2772aa66ca07cea15c56f3f94f 282 Pfam PF01578 Cytochrome C assembly protein 36 260 1.0E-37 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 XFC3_00300 ba8c7d2772aa66ca07cea15c56f3f94f 282 Pfam PF01578 Cytochrome C assembly protein 36 260 1.0E-37 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 XFC3_04800 c4a5fa666311513a370e783afaea12f4 443 SUPERFAMILY SSF53092 9 180 7.85E-55 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XFC3_04800 c4a5fa666311513a370e783afaea12f4 443 SMART SM01011 7 142 6.2E-66 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 XFC3_04800 c4a5fa666311513a370e783afaea12f4 443 Pfam PF05195 Aminopeptidase P, N-terminal domain 15 132 6.1E-39 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 XFC3_04800 c4a5fa666311513a370e783afaea12f4 443 Pfam PF00557 Metallopeptidase family M24 188 418 5.4E-57 T 11-10-2018 IPR000994 Peptidase M24 XFC3_04800 c4a5fa666311513a370e783afaea12f4 443 PRINTS PR00599 Methionine aminopeptidase-1 signature 258 274 2.7E-6 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFC3_04800 c4a5fa666311513a370e783afaea12f4 443 PRINTS PR00599 Methionine aminopeptidase-1 signature 376 388 2.7E-6 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFC3_04800 c4a5fa666311513a370e783afaea12f4 443 Gene3D G3DSA:3.90.230.10 178 442 2.2E-87 T 11-10-2018 XFC3_04800 c4a5fa666311513a370e783afaea12f4 443 Gene3D G3DSA:3.40.350.10 9 177 6.2E-56 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XFC3_04800 c4a5fa666311513a370e783afaea12f4 443 SUPERFAMILY SSF55920 183 439 7.85E-78 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like XFC3_05510 8e53b3aa49d58fc6101a818e24ad4d07 230 PIRSF PIRSF006293 1 225 9.5E-81 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XFC3_05510 8e53b3aa49d58fc6101a818e24ad4d07 230 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 56.098 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XFC3_05510 8e53b3aa49d58fc6101a818e24ad4d07 230 Gene3D G3DSA:3.40.50.620 1 223 3.0E-71 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_05510 8e53b3aa49d58fc6101a818e24ad4d07 230 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 4.3E-58 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XFC3_05510 8e53b3aa49d58fc6101a818e24ad4d07 230 SUPERFAMILY SSF52402 1 221 1.57E-60 T 11-10-2018 XFC3_05510 8e53b3aa49d58fc6101a818e24ad4d07 230 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 6.9E-74 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XFC3_10975 d255eb4664313e16a135fa34c0144dc2 620 Pfam PF03600 Citrate transporter 23 563 5.9E-46 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 XFC3_10975 d255eb4664313e16a135fa34c0144dc2 620 SUPERFAMILY SSF116726 336 414 4.45E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XFC3_10975 d255eb4664313e16a135fa34c0144dc2 620 Gene3D G3DSA:3.30.70.1450 242 317 1.4E-5 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XFC3_10975 d255eb4664313e16a135fa34c0144dc2 620 Gene3D G3DSA:3.30.70.1450 335 408 4.4E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XFC3_10975 d255eb4664313e16a135fa34c0144dc2 620 SUPERFAMILY SSF116726 240 313 1.44E-7 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XFC3_10975 d255eb4664313e16a135fa34c0144dc2 620 Pfam PF02080 TrkA-C domain 246 315 1.5E-7 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 XFC3_10975 d255eb4664313e16a135fa34c0144dc2 620 Pfam PF02080 TrkA-C domain 338 404 3.0E-8 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 XFC3_06335 bf305a4f722313c59b5324e75f98c4f7 300 Pfam PF12101 Protein of unknown function (DUF3577) 5 120 2.0E-36 T 11-10-2018 IPR021960 Protein of unknown function DUF3577 XFC3_06335 bf305a4f722313c59b5324e75f98c4f7 300 Pfam PF12101 Protein of unknown function (DUF3577) 131 257 1.3E-46 T 11-10-2018 IPR021960 Protein of unknown function DUF3577 XFC3_11515 040c921f5364f4aef7597035bacb9898 463 Gene3D G3DSA:1.20.81.30 315 425 6.4E-27 T 11-10-2018 XFC3_11515 040c921f5364f4aef7597035bacb9898 463 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 223 251 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 XFC3_11515 040c921f5364f4aef7597035bacb9898 463 Pfam PF00482 Type II secretion system (T2SS), protein F 332 454 7.6E-29 T 11-10-2018 IPR018076 Type II secretion system F domain XFC3_11515 040c921f5364f4aef7597035bacb9898 463 Pfam PF00482 Type II secretion system (T2SS), protein F 128 251 1.5E-31 T 11-10-2018 IPR018076 Type II secretion system F domain XFC3_11515 040c921f5364f4aef7597035bacb9898 463 PRINTS PR00812 Bacterial general secretion pathway protein F signature 427 441 1.2E-17 T 11-10-2018 IPR003004 GspF/PilC family XFC3_11515 040c921f5364f4aef7597035bacb9898 463 PRINTS PR00812 Bacterial general secretion pathway protein F signature 223 251 1.2E-17 T 11-10-2018 IPR003004 GspF/PilC family XFC3_11515 040c921f5364f4aef7597035bacb9898 463 PRINTS PR00812 Bacterial general secretion pathway protein F signature 443 462 1.2E-17 T 11-10-2018 IPR003004 GspF/PilC family XFC3_11515 040c921f5364f4aef7597035bacb9898 463 PRINTS PR00812 Bacterial general secretion pathway protein F signature 124 136 1.2E-17 T 11-10-2018 IPR003004 GspF/PilC family XFC3_11515 040c921f5364f4aef7597035bacb9898 463 Gene3D G3DSA:1.20.81.30 115 230 1.0E-30 T 11-10-2018 XFC3_08040 29c0cac7970e21102f893906406c2d19 256 SUPERFAMILY SSF55120 1 250 6.47E-80 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_08040 29c0cac7970e21102f893906406c2d19 256 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 238 3.2E-56 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_08040 29c0cac7970e21102f893906406c2d19 256 Gene3D G3DSA:3.30.70.580 1 105 5.2E-31 T 11-10-2018 XFC3_08040 29c0cac7970e21102f893906406c2d19 256 Gene3D G3DSA:3.30.70.660 106 241 2.0E-44 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 XFC3_08040 29c0cac7970e21102f893906406c2d19 256 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 244 30.421 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_08040 29c0cac7970e21102f893906406c2d19 256 Pfam PF01416 tRNA pseudouridine synthase 143 244 1.1E-25 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_08040 29c0cac7970e21102f893906406c2d19 256 PIRSF PIRSF001430 1 253 1.4E-64 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_02460 9b39cf5d718704b04f7322983ffcc3ef 291 SUPERFAMILY SSF54001 163 290 7.11E-40 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XFC3_02460 9b39cf5d718704b04f7322983ffcc3ef 291 Gene3D G3DSA:3.90.1720.10 165 291 4.4E-39 T 11-10-2018 XFC3_02460 9b39cf5d718704b04f7322983ffcc3ef 291 Pfam PF00877 NlpC/P60 family 181 289 4.8E-29 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain XFC3_11480 da81853e416bc24b958764fbfdafc1df 339 Gene3D G3DSA:1.10.150.130 64 168 4.1E-6 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFC3_11480 da81853e416bc24b958764fbfdafc1df 339 SUPERFAMILY SSF56349 65 328 2.56E-48 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFC3_11480 da81853e416bc24b958764fbfdafc1df 339 Pfam PF00589 Phage integrase family 174 329 2.3E-15 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFC3_11480 da81853e416bc24b958764fbfdafc1df 339 Gene3D G3DSA:1.10.443.10 169 335 2.9E-29 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFC3_02440 833110822f9e881d823eb6edeaad61b1 220 Gene3D G3DSA:1.20.1540.10 2 200 2.1E-33 T 11-10-2018 IPR035952 Rhomboid-like superfamily XFC3_02440 833110822f9e881d823eb6edeaad61b1 220 Pfam PF01694 Rhomboid family 52 201 1.4E-37 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 XFC3_02440 833110822f9e881d823eb6edeaad61b1 220 SUPERFAMILY SSF144091 4 201 5.89E-42 T 11-10-2018 XFC3_02440 833110822f9e881d823eb6edeaad61b1 220 SMART SM01160 49 138 0.0019 T 11-10-2018 XFC3_09065 ec619ab104b0c57342af84a1426a4d27 497 Pfam PF00575 S1 RNA binding domain 38 125 3.5E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFC3_09065 ec619ab104b0c57342af84a1426a4d27 497 Pfam PF10150 Ribonuclease E/G family 130 401 1.5E-98 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 XFC3_09065 ec619ab104b0c57342af84a1426a4d27 497 SUPERFAMILY SSF50249 39 134 2.29E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_09065 ec619ab104b0c57342af84a1426a4d27 497 SMART SM00316 37 128 3.3E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFC3_09065 ec619ab104b0c57342af84a1426a4d27 497 Gene3D G3DSA:2.40.50.140 33 133 4.5E-30 T 11-10-2018 XFC3_09065 ec619ab104b0c57342af84a1426a4d27 497 Gene3D G3DSA:3.40.1260.20 410 497 2.9E-6 T 11-10-2018 XFC3_09065 ec619ab104b0c57342af84a1426a4d27 497 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 434 9.2E-150 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 XFC3_06310 3fde639d10a4cf951622e3e29d5985eb 444 Pfam PF07690 Major Facilitator Superfamily 4 393 4.5E-57 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XFC3_06310 3fde639d10a4cf951622e3e29d5985eb 444 Gene3D G3DSA:1.20.1720.10 1 246 6.3E-44 T 11-10-2018 XFC3_06310 3fde639d10a4cf951622e3e29d5985eb 444 Gene3D G3DSA:1.20.1250.20 247 436 2.0E-23 T 11-10-2018 XFC3_06310 3fde639d10a4cf951622e3e29d5985eb 444 SUPERFAMILY SSF103473 1 433 1.44E-62 T 11-10-2018 IPR036259 MFS transporter superfamily XFC3_06310 3fde639d10a4cf951622e3e29d5985eb 444 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 2 403 5.1E-71 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 XFC3_00520 a8371921430c0a38318ee7d49e904e25 674 SUPERFAMILY SSF55486 1 671 9.04E-179 T 11-10-2018 XFC3_00520 a8371921430c0a38318ee7d49e904e25 674 Pfam PF01432 Peptidase family M3 224 671 2.7E-136 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 XFC3_00520 a8371921430c0a38318ee7d49e904e25 674 Gene3D G3DSA:1.10.1370.10 139 604 4.4E-238 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 XFC3_00520 a8371921430c0a38318ee7d49e904e25 674 Gene3D G3DSA:1.10.1370.40 13 669 4.4E-238 T 11-10-2018 XFC3_07945 eb65ab3364b0068aa349f43018dea47e 277 SUPERFAMILY SSF53335 35 270 1.98E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_07945 eb65ab3364b0068aa349f43018dea47e 277 Pfam PF13649 Methyltransferase domain 56 150 3.3E-15 T 11-10-2018 XFC3_07945 eb65ab3364b0068aa349f43018dea47e 277 Gene3D G3DSA:3.40.50.150 28 274 1.8E-31 T 11-10-2018 XFC3_11245 7e70aa592e21b13ffb4eb66117a44ff5 392 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 109 281 1.2E-34 T 11-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain XFC3_11245 7e70aa592e21b13ffb4eb66117a44ff5 392 Pfam PF17482 Phage tail sheath C-terminal domain 282 383 7.4E-20 T 11-10-2018 IPR020287 Tail sheath protein, C-terminal domain XFC3_07515 7e70aa592e21b13ffb4eb66117a44ff5 392 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 109 281 1.2E-34 T 11-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain XFC3_07515 7e70aa592e21b13ffb4eb66117a44ff5 392 Pfam PF17482 Phage tail sheath C-terminal domain 282 383 7.4E-20 T 11-10-2018 IPR020287 Tail sheath protein, C-terminal domain XFC3_09935 7e70aa592e21b13ffb4eb66117a44ff5 392 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 109 281 1.2E-34 T 11-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain XFC3_09935 7e70aa592e21b13ffb4eb66117a44ff5 392 Pfam PF17482 Phage tail sheath C-terminal domain 282 383 7.4E-20 T 11-10-2018 IPR020287 Tail sheath protein, C-terminal domain XFC3_03215 4059bdd666cf770afb3063982f358cbc 394 Pfam PF12679 ABC-2 family transporter protein 8 356 1.4E-23 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 XFC3_11440 92e71a31c6875d0aeb2a2985bc1d5981 425 Pfam PF10926 Protein of unknown function (DUF2800) 4 391 1.2E-116 T 11-10-2018 IPR021229 Protein of unknown function DUF2800 XFC3_07310 92e71a31c6875d0aeb2a2985bc1d5981 425 Pfam PF10926 Protein of unknown function (DUF2800) 4 391 1.2E-116 T 11-10-2018 IPR021229 Protein of unknown function DUF2800 XFC3_00940 25b03be5db6a64539b361e58dda68b60 116 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 27 107 2.7E-24 T 11-10-2018 IPR003849 Preprotein translocase YajC XFC3_00940 25b03be5db6a64539b361e58dda68b60 116 SMART SM01323 25 107 2.8E-39 T 11-10-2018 IPR003849 Preprotein translocase YajC XFC3_00940 25b03be5db6a64539b361e58dda68b60 116 PRINTS PR01853 Bacterial YajC preprotein translocase signature 65 83 3.8E-12 T 11-10-2018 IPR003849 Preprotein translocase YajC XFC3_00940 25b03be5db6a64539b361e58dda68b60 116 PRINTS PR01853 Bacterial YajC preprotein translocase signature 27 47 3.8E-12 T 11-10-2018 IPR003849 Preprotein translocase YajC XFC3_00940 25b03be5db6a64539b361e58dda68b60 116 Pfam PF02699 Preprotein translocase subunit 29 105 2.4E-26 T 11-10-2018 IPR003849 Preprotein translocase YajC XFC3_06105 017ba291b16e10e5ee7cef06b55cb407 190 Gene3D G3DSA:2.40.160.10 16 125 2.3E-6 T 11-10-2018 IPR023614 Porin domain superfamily XFC3_06105 017ba291b16e10e5ee7cef06b55cb407 190 SUPERFAMILY SSF56935 15 155 2.42E-7 T 11-10-2018 XFC3_06105 017ba291b16e10e5ee7cef06b55cb407 190 TIGRFAM TIGR04273 Y_sulf_Ax21: sulfation-dependent quorum factor, Ax21 family 6 190 2.1E-91 T 11-10-2018 IPR026364 Ax21 family XFC3_08125 fd1d3ce74beac9bd0925205ccfab2510 749 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 651 700 1.1E-4 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFC3_08125 fd1d3ce74beac9bd0925205ccfab2510 749 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 603 645 0.0032 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFC3_08125 fd1d3ce74beac9bd0925205ccfab2510 749 SUPERFAMILY SSF56719 35 489 1.28E-145 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XFC3_08125 fd1d3ce74beac9bd0925205ccfab2510 749 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 474 1.5E-128 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFC3_08125 fd1d3ce74beac9bd0925205ccfab2510 749 SMART SM00434 15 467 8.3E-204 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFC3_08125 fd1d3ce74beac9bd0925205ccfab2510 749 Gene3D G3DSA:3.90.199.10 36 487 3.5E-166 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 XFC3_08125 fd1d3ce74beac9bd0925205ccfab2510 749 SUPERFAMILY SSF101904 503 745 7.19E-48 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XFC3_08125 fd1d3ce74beac9bd0925205ccfab2510 749 Gene3D G3DSA:2.120.10.90 505 736 2.0E-16 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XFC3_08125 fd1d3ce74beac9bd0925205ccfab2510 749 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 32.95 T 11-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFC3_08125 fd1d3ce74beac9bd0925205ccfab2510 749 Gene3D G3DSA:3.30.1360.40 242 337 3.5E-166 T 11-10-2018 XFC3_08125 fd1d3ce74beac9bd0925205ccfab2510 749 Gene3D G3DSA:1.10.268.10 375 460 3.5E-166 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XFC3_08125 fd1d3ce74beac9bd0925205ccfab2510 749 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 13 745 0.0 T 11-10-2018 XFC3_00365 2737aac2a24bf23eb8ca55a999a8d259 317 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 312 28.968 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 XFC3_00365 2737aac2a24bf23eb8ca55a999a8d259 317 SUPERFAMILY SSF52540 10 154 4.47E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_00365 2737aac2a24bf23eb8ca55a999a8d259 317 Gene3D G3DSA:3.40.50.300 13 299 2.2E-96 T 11-10-2018 XFC3_00365 2737aac2a24bf23eb8ca55a999a8d259 317 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 302 1.3E-91 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 XFC3_00365 2737aac2a24bf23eb8ca55a999a8d259 317 Gene3D G3DSA:1.10.20.140 116 188 2.2E-96 T 11-10-2018 XFC3_00365 2737aac2a24bf23eb8ca55a999a8d259 317 Pfam PF01715 IPP transferase 43 292 2.9E-80 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 XFC3_02180 f6e839abdd8820c315b9f5c9447bb6c0 387 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 53 290 6.4E-61 T 11-10-2018 IPR018642 Protein of unknown function DUF2066 XFC3_09755 028892fe74fff19e1eef511ab09673ca 467 Pfam PF17289 Terminase RNaseH-like domain 295 446 9.0E-23 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like XFC3_09755 028892fe74fff19e1eef511ab09673ca 467 Pfam PF03237 Terminase-like family 54 276 3.5E-32 T 11-10-2018 IPR004921 Terminase large subunit, T4likevirus-type XFC3_09755 028892fe74fff19e1eef511ab09673ca 467 Gene3D G3DSA:3.30.420.280 266 456 3.1E-58 T 11-10-2018 XFC3_09280 bc63a0cb161e938c387a5f353d665682 131 Gene3D G3DSA:1.20.1300.10 1 128 3.2E-34 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09280 bc63a0cb161e938c387a5f353d665682 131 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 118 1.8E-24 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09280 bc63a0cb161e938c387a5f353d665682 131 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 122 1.8E-36 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09280 bc63a0cb161e938c387a5f353d665682 131 SUPERFAMILY SSF81343 3 124 1.06E-31 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09280 bc63a0cb161e938c387a5f353d665682 131 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 6 30 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_09280 bc63a0cb161e938c387a5f353d665682 131 PIRSF PIRSF000178 1 125 1.9E-37 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFC3_06050 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 Gene3D G3DSA:3.40.50.300 10 207 3.9E-44 T 11-10-2018 XFC3_06050 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 Gene3D G3DSA:1.10.8.300 210 314 4.9E-26 T 11-10-2018 XFC3_06050 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 SUPERFAMILY SSF52540 19 290 2.62E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_06050 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 PIRSF PIRSF002849 2 317 7.4E-119 T 11-10-2018 XFC3_06050 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 48 178 2.3E-62 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 XFC3_08680 5927c39ab10669ba564aa837d02c8b0e 328 Gene3D G3DSA:3.40.50.720 1 156 1.3E-56 T 11-10-2018 XFC3_08680 5927c39ab10669ba564aa837d02c8b0e 328 SUPERFAMILY SSF56327 159 327 3.86E-57 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 XFC3_08680 5927c39ab10669ba564aa837d02c8b0e 328 SUPERFAMILY SSF51735 4 157 1.06E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_08680 5927c39ab10669ba564aa837d02c8b0e 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 150 7.5E-36 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 XFC3_08680 5927c39ab10669ba564aa837d02c8b0e 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 54.892 T 11-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 XFC3_08680 5927c39ab10669ba564aa837d02c8b0e 328 Gene3D G3DSA:3.90.110.10 157 328 9.4E-60 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 XFC3_08680 5927c39ab10669ba564aa837d02c8b0e 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 322 8.4E-29 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 XFC3_08680 5927c39ab10669ba564aa837d02c8b0e 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 3 321 6.4E-140 T 11-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 XFC3_08680 5927c39ab10669ba564aa837d02c8b0e 328 PIRSF PIRSF000102 1 326 1.4E-62 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 XFC3_02715 5e417b9bd7198bb5e3f821d44221bcab 430 Pfam PF13416 Bacterial extracellular solute-binding protein 43 352 2.2E-38 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein XFC3_02715 5e417b9bd7198bb5e3f821d44221bcab 430 SUPERFAMILY SSF53850 27 406 1.79E-82 T 11-10-2018 XFC3_02715 5e417b9bd7198bb5e3f821d44221bcab 430 Gene3D G3DSA:3.40.190.10 41 368 2.3E-135 T 11-10-2018 XFC3_02715 5e417b9bd7198bb5e3f821d44221bcab 430 Gene3D G3DSA:3.40.190.10 141 405 2.3E-135 T 11-10-2018 XFC3_03870 1bb0d5cc12a4b0cf188107d5524ba640 432 Pfam PF04830 Possible hemagglutinin (DUF637) 2 56 5.8E-7 T 11-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative XFC3_03870 1bb0d5cc12a4b0cf188107d5524ba640 432 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 216 390 3.6E-18 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFC3_08070 c1d394c60bc5b2655de4e4be9f7a8206 293 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 47 278 2.4E-60 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 XFC3_08070 c1d394c60bc5b2655de4e4be9f7a8206 293 Pfam PF02666 Phosphatidylserine decarboxylase 61 277 6.8E-50 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 XFC3_08070 c1d394c60bc5b2655de4e4be9f7a8206 293 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 8 280 43.38 T 11-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 XFC3_03400 7de2f7df9cad0d052f4276feac6afa24 231 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 151 228 8.4E-23 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 XFC3_03400 7de2f7df9cad0d052f4276feac6afa24 231 Gene3D G3DSA:3.30.1150.10 126 229 1.2E-23 T 11-10-2018 XFC3_03400 7de2f7df9cad0d052f4276feac6afa24 231 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 152 229 3.7E-24 T 11-10-2018 IPR006260 TonB/TolA, C-terminal XFC3_03400 7de2f7df9cad0d052f4276feac6afa24 231 SUPERFAMILY SSF74653 146 227 4.97E-20 T 11-10-2018 XFC3_01330 6c6344547d9b72d5b237d3b9aeb34035 249 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 132 187 3.0E-26 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01330 6c6344547d9b72d5b237d3b9aeb34035 249 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 160 181 - T 11-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01330 6c6344547d9b72d5b237d3b9aeb34035 249 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 12 207 32.567 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01330 6c6344547d9b72d5b237d3b9aeb34035 249 Gene3D G3DSA:3.30.460.80 1 77 2.3E-6 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01330 6c6344547d9b72d5b237d3b9aeb34035 249 Gene3D G3DSA:3.30.460.80 100 179 8.5E-28 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01330 6c6344547d9b72d5b237d3b9aeb34035 249 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 34 200 3.0E-40 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01330 6c6344547d9b72d5b237d3b9aeb34035 249 SUPERFAMILY SSF143243 8 219 3.4E-52 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_03395 01e1079646bce0d4b058688ca6481755 353 Gene3D G3DSA:1.10.443.10 177 348 2.6E-19 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFC3_03395 01e1079646bce0d4b058688ca6481755 353 Gene3D G3DSA:1.10.150.130 72 175 2.4E-9 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFC3_03395 01e1079646bce0d4b058688ca6481755 353 Pfam PF00589 Phage integrase family 190 345 3.2E-6 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFC3_03395 01e1079646bce0d4b058688ca6481755 353 SUPERFAMILY SSF56349 74 345 4.41E-37 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFC3_10285 b3633948eb7b25a70d10092f92265ab7 562 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 41 524 3.3E-196 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 XFC3_10285 b3633948eb7b25a70d10092f92265ab7 562 Gene3D G3DSA:3.30.9.10 146 305 4.7E-7 T 11-10-2018 XFC3_10285 b3633948eb7b25a70d10092f92265ab7 562 Gene3D G3DSA:3.50.50.60 43 297 4.7E-7 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_10285 b3633948eb7b25a70d10092f92265ab7 562 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 41 526 1.9E-223 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 XFC3_10285 b3633948eb7b25a70d10092f92265ab7 562 SUPERFAMILY SSF51905 20 359 2.85E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_10285 b3633948eb7b25a70d10092f92265ab7 562 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 37 526 53.14 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 XFC3_08455 fff378bccc2754f53a08a63907fc7e0c 266 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 122 206 4.7E-12 T 11-10-2018 IPR032030 YscD, cytoplasmic domain XFC3_08455 fff378bccc2754f53a08a63907fc7e0c 266 Gene3D G3DSA:2.60.200.20 97 207 3.2E-16 T 11-10-2018 XFC3_08455 fff378bccc2754f53a08a63907fc7e0c 266 SUPERFAMILY SSF49879 114 204 3.94E-16 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 XFC3_03130 262882e385cb6ca0b06a91bc7dd42771 146 SUPERFAMILY SSF55961 1 139 3.05E-24 T 11-10-2018 XFC3_03130 262882e385cb6ca0b06a91bc7dd42771 146 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 134 1.4E-25 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 XFC3_03130 262882e385cb6ca0b06a91bc7dd42771 146 Gene3D G3DSA:3.30.530.20 5 141 3.4E-23 T 11-10-2018 IPR023393 START-like domain superfamily XFC3_03025 8d371036b28f1ba0971144e91e39fe25 215 Pfam PF00694 Aconitase C-terminal domain 1 131 4.2E-37 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 XFC3_03025 8d371036b28f1ba0971144e91e39fe25 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.469 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 XFC3_03025 8d371036b28f1ba0971144e91e39fe25 215 SUPERFAMILY SSF52016 1 203 3.92E-62 T 11-10-2018 XFC3_03025 8d371036b28f1ba0971144e91e39fe25 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.4E-85 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 XFC3_03025 8d371036b28f1ba0971144e91e39fe25 215 Gene3D G3DSA:3.20.19.10 1 184 1.4E-74 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 XFC3_05240 4571ee19a751f81cb09002908e58f058 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 26.076 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XFC3_05240 4571ee19a751f81cb09002908e58f058 90 PIRSF PIRSF029827 1 90 8.3E-39 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XFC3_05240 4571ee19a751f81cb09002908e58f058 90 SUPERFAMILY SSF111148 1 89 4.71E-33 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 XFC3_05240 4571ee19a751f81cb09002908e58f058 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.5E-35 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XFC3_05240 4571ee19a751f81cb09002908e58f058 90 Gene3D G3DSA:1.10.3880.10 1 90 1.7E-31 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 XFC3_05240 4571ee19a751f81cb09002908e58f058 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 64 2.0E-33 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XFC3_04975 a4ca8bb87779aa2d84bf92b7be2fa9c8 840 Gene3D G3DSA:3.40.50.300 22 218 2.2E-12 T 11-10-2018 XFC3_04975 a4ca8bb87779aa2d84bf92b7be2fa9c8 840 SUPERFAMILY SSF52540 43 210 4.64E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07600 1a25e68a1894f4facbea507b42cb2bd3 278 Gene3D G3DSA:3.40.50.300 1 248 3.0E-60 T 11-10-2018 XFC3_07600 1a25e68a1894f4facbea507b42cb2bd3 278 Pfam PF00005 ABC transporter 17 172 5.0E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_07600 1a25e68a1894f4facbea507b42cb2bd3 278 SUPERFAMILY SSF52540 2 248 8.23E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07600 1a25e68a1894f4facbea507b42cb2bd3 278 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 5.3E-108 T 11-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 XFC3_07600 1a25e68a1894f4facbea507b42cb2bd3 278 SMART SM00382 26 230 3.7E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_02520 4c1205beb09c864a5e9af35c252e38e2 896 PIRSF PIRSF000156 1 896 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 XFC3_02520 4c1205beb09c864a5e9af35c252e38e2 896 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 9 894 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 XFC3_02520 4c1205beb09c864a5e9af35c252e38e2 896 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 140 294 1.3E-6 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFC3_02520 4c1205beb09c864a5e9af35c252e38e2 896 Gene3D G3DSA:3.40.50.970 477 711 3.4E-101 T 11-10-2018 XFC3_02520 4c1205beb09c864a5e9af35c252e38e2 896 SUPERFAMILY SSF52518 480 706 9.18E-92 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFC3_02520 4c1205beb09c864a5e9af35c252e38e2 896 Gene3D G3DSA:3.40.50.970 59 476 1.3E-125 T 11-10-2018 XFC3_02520 4c1205beb09c864a5e9af35c252e38e2 896 SUPERFAMILY SSF52922 707 894 9.99E-58 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XFC3_02520 4c1205beb09c864a5e9af35c252e38e2 896 SUPERFAMILY SSF52518 60 472 4.29E-133 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFC3_02520 4c1205beb09c864a5e9af35c252e38e2 896 Gene3D G3DSA:3.40.50.920 712 895 1.6E-73 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XFC3_06120 52b736885b62d61bf350b53f92a48b26 146 Pfam PF00581 Rhodanese-like domain 44 136 4.7E-17 T 11-10-2018 IPR001763 Rhodanese-like domain XFC3_06120 52b736885b62d61bf350b53f92a48b26 146 Gene3D G3DSA:3.40.250.10 40 145 2.9E-23 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFC3_06120 52b736885b62d61bf350b53f92a48b26 146 SUPERFAMILY SSF52821 22 144 6.55E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFC3_06120 52b736885b62d61bf350b53f92a48b26 146 SMART SM00450 42 140 2.8E-17 T 11-10-2018 IPR001763 Rhodanese-like domain XFC3_01840 5841f0ee815190c7dde4a9a127f4a077 256 Gene3D G3DSA:1.20.120.1760 9 198 3.7E-13 T 11-10-2018 XFC3_01840 5841f0ee815190c7dde4a9a127f4a077 256 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XFC3_01840 5841f0ee815190c7dde4a9a127f4a077 256 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 79 5.2E-14 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XFC3_01840 5841f0ee815190c7dde4a9a127f4a077 256 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 24 192 1.6E-31 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 XFC3_08100 4b4828e78c59cf725b2036444a6e830e 387 Pfam PF02628 Cytochrome oxidase assembly protein 137 377 1.1E-45 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 XFC3_08100 4b4828e78c59cf725b2036444a6e830e 387 Pfam PF02628 Cytochrome oxidase assembly protein 15 122 2.4E-19 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 XFC3_11265 dce6abc99162a090380359334ac572e8 112 Pfam PF04965 Gene 25-like lysozyme 16 85 2.5E-14 T 11-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD XFC3_11265 dce6abc99162a090380359334ac572e8 112 SUPERFAMILY SSF160719 9 103 1.29E-25 T 11-10-2018 XFC3_11265 dce6abc99162a090380359334ac572e8 112 Gene3D G3DSA:3.10.450.40 3 103 9.2E-20 T 11-10-2018 XFC3_06970 e55ab0b2c94fa1498220eb7a33039d59 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 6.4E-48 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 XFC3_06970 e55ab0b2c94fa1498220eb7a33039d59 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 450 3.5E-115 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFC3_06970 e55ab0b2c94fa1498220eb7a33039d59 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 XFC3_06970 e55ab0b2c94fa1498220eb7a33039d59 455 Gene3D G3DSA:1.20.200.10 118 446 1.9E-150 T 11-10-2018 XFC3_06970 e55ab0b2c94fa1498220eb7a33039d59 455 Gene3D G3DSA:1.10.40.30 382 445 1.9E-150 T 11-10-2018 XFC3_06970 e55ab0b2c94fa1498220eb7a33039d59 455 Gene3D G3DSA:1.10.275.10 1 117 1.3E-41 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal XFC3_06970 e55ab0b2c94fa1498220eb7a33039d59 455 SUPERFAMILY SSF48557 7 447 1.37E-96 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 XFC3_06970 e55ab0b2c94fa1498220eb7a33039d59 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 1.1E-17 T 11-10-2018 IPR000362 Fumarate lyase family XFC3_06970 e55ab0b2c94fa1498220eb7a33039d59 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.1E-17 T 11-10-2018 IPR000362 Fumarate lyase family XFC3_06970 e55ab0b2c94fa1498220eb7a33039d59 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 1.1E-17 T 11-10-2018 IPR000362 Fumarate lyase family XFC3_06970 e55ab0b2c94fa1498220eb7a33039d59 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.1E-17 T 11-10-2018 IPR000362 Fumarate lyase family XFC3_06970 e55ab0b2c94fa1498220eb7a33039d59 455 Pfam PF00206 Lyase 14 312 5.7E-58 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal XFC3_01950 c7622d263955779aa2a9047f4ca39a04 456 Gene3D G3DSA:3.40.50.450 128 454 1.4E-111 T 11-10-2018 XFC3_01950 c7622d263955779aa2a9047f4ca39a04 456 SUPERFAMILY SSF102405 131 332 1.98E-38 T 11-10-2018 XFC3_01950 c7622d263955779aa2a9047f4ca39a04 456 Pfam PF03641 Possible lysine decarboxylase 193 332 4.4E-31 T 11-10-2018 IPR031100 LOG family XFC3_01950 c7622d263955779aa2a9047f4ca39a04 456 Pfam PF11892 Domain of unknown function (DUF3412) 336 454 4.4E-53 T 11-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 XFC3_01950 c7622d263955779aa2a9047f4ca39a04 456 Gene3D G3DSA:3.30.1850.10 5 126 2.4E-34 T 11-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 XFC3_01950 c7622d263955779aa2a9047f4ca39a04 456 Pfam PF14793 Domain of unknown function (DUF4478) 10 114 8.9E-35 T 11-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 XFC3_02190 e5fe51ff33082728f835ea81b0aa0fa5 233 Gene3D G3DSA:3.40.50.300 2 160 1.1E-24 T 11-10-2018 XFC3_02190 e5fe51ff33082728f835ea81b0aa0fa5 233 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 229 1.6E-71 T 11-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 XFC3_02190 e5fe51ff33082728f835ea81b0aa0fa5 233 SMART SM00382 40 163 1.7E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_02190 e5fe51ff33082728f835ea81b0aa0fa5 233 Gene3D G3DSA:1.10.8.60 164 229 6.6E-23 T 11-10-2018 XFC3_02190 e5fe51ff33082728f835ea81b0aa0fa5 233 SUPERFAMILY SSF52540 21 209 6.53E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02190 e5fe51ff33082728f835ea81b0aa0fa5 233 Pfam PF01695 IstB-like ATP binding protein 28 87 1.2E-6 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 XFC3_05190 3962ce4768e970dbfde2e0ffe51ff807 190 Pfam PF14518 Iron-containing redox enzyme 2 163 3.4E-19 T 11-10-2018 XFC3_05190 3962ce4768e970dbfde2e0ffe51ff807 190 SUPERFAMILY SSF48613 5 175 6.68E-24 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 XFC3_05190 3962ce4768e970dbfde2e0ffe51ff807 190 Gene3D G3DSA:1.20.910.10 1 187 1.7E-43 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 XFC3_02865 07f4e64909ba7c16d1ed9ecc64528033 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 37.808 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 XFC3_02865 07f4e64909ba7c16d1ed9ecc64528033 316 Gene3D G3DSA:3.40.50.11270 12 96 2.7E-109 T 11-10-2018 XFC3_02865 07f4e64909ba7c16d1ed9ecc64528033 316 Gene3D G3DSA:3.40.1010.20 97 198 2.7E-109 T 11-10-2018 XFC3_02865 07f4e64909ba7c16d1ed9ecc64528033 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 3.4E-98 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 XFC3_02865 07f4e64909ba7c16d1ed9ecc64528033 316 Gene3D G3DSA:3.40.1010.20 6 283 2.7E-109 T 11-10-2018 XFC3_02865 07f4e64909ba7c16d1ed9ecc64528033 316 Pfam PF02401 LytB protein 3 284 1.2E-90 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 XFC3_00945 7aac9450955917e84a54558fd6197435 614 Pfam PF02355 Protein export membrane protein 435 600 1.9E-20 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial XFC3_00945 7aac9450955917e84a54558fd6197435 614 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 598 9.3E-121 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 XFC3_00945 7aac9450955917e84a54558fd6197435 614 Pfam PF07549 SecD/SecF GG Motif 115 140 6.9E-6 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site XFC3_00945 7aac9450955917e84a54558fd6197435 614 Gene3D G3DSA:3.30.1360.200 276 430 6.6E-41 T 11-10-2018 XFC3_00945 7aac9450955917e84a54558fd6197435 614 Gene3D G3DSA:1.20.1640.10 435 611 4.5E-15 T 11-10-2018 XFC3_00945 7aac9450955917e84a54558fd6197435 614 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 613 43.451 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 XFC3_00945 7aac9450955917e84a54558fd6197435 614 SUPERFAMILY SSF82866 407 606 6.93E-42 T 11-10-2018 XFC3_00945 7aac9450955917e84a54558fd6197435 614 Gene3D G3DSA:3.30.70.3400 217 434 6.6E-41 T 11-10-2018 XFC3_00945 7aac9450955917e84a54558fd6197435 614 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 391 592 3.7E-62 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XFC3_00945 7aac9450955917e84a54558fd6197435 614 Pfam PF13721 SecD export protein N-terminal TM region 3 102 4.6E-30 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain XFC3_00945 7aac9450955917e84a54558fd6197435 614 Gene3D G3DSA:3.30.70.260 26 105 1.2E-5 T 11-10-2018 XFC3_05925 7b64e5a1166d0c21d585cdd1cfc64c8d 261 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 260 16.288 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 XFC3_05925 7b64e5a1166d0c21d585cdd1cfc64c8d 261 Pfam PF02673 Bacitracin resistance protein BacA 7 255 3.8E-70 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 XFC3_05115 be88e0e6e6347b8ff9b9041e55032608 197 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 83 156 1.1E-16 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XFC3_05115 be88e0e6e6347b8ff9b9041e55032608 197 SUPERFAMILY SSF56214 83 191 7.67E-24 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XFC3_05115 be88e0e6e6347b8ff9b9041e55032608 197 Gene3D G3DSA:3.90.470.20 83 189 5.4E-21 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XFC3_05115 be88e0e6e6347b8ff9b9041e55032608 197 SUPERFAMILY SSF56214 16 74 4.39E-8 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XFC3_03475 ddd3cf431aa9592f9ff0d1987448905c 275 Pfam PF00230 Major intrinsic protein 4 247 5.6E-49 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFC3_03475 ddd3cf431aa9592f9ff0d1987448905c 275 Gene3D G3DSA:1.20.1080.10 2 256 1.7E-76 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 XFC3_03475 ddd3cf431aa9592f9ff0d1987448905c 275 TIGRFAM TIGR00861 MIP: MIP family channel proteins 12 247 9.2E-58 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFC3_03475 ddd3cf431aa9592f9ff0d1987448905c 275 ProSitePatterns PS00221 MIP family signature. 67 75 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 XFC3_03475 ddd3cf431aa9592f9ff0d1987448905c 275 SUPERFAMILY SSF81338 5 253 3.92E-62 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 XFC3_03475 ddd3cf431aa9592f9ff0d1987448905c 275 PRINTS PR00783 Major intrinsic protein family signature 149 167 9.2E-43 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFC3_03475 ddd3cf431aa9592f9ff0d1987448905c 275 PRINTS PR00783 Major intrinsic protein family signature 7 26 9.2E-43 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFC3_03475 ddd3cf431aa9592f9ff0d1987448905c 275 PRINTS PR00783 Major intrinsic protein family signature 183 205 9.2E-43 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFC3_03475 ddd3cf431aa9592f9ff0d1987448905c 275 PRINTS PR00783 Major intrinsic protein family signature 49 73 9.2E-43 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFC3_03475 ddd3cf431aa9592f9ff0d1987448905c 275 PRINTS PR00783 Major intrinsic protein family signature 86 105 9.2E-43 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFC3_03475 ddd3cf431aa9592f9ff0d1987448905c 275 PRINTS PR00783 Major intrinsic protein family signature 231 251 9.2E-43 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFC3_08015 4c5790b44c970d7d35e41db01e58cdca 321 Pfam PF00296 Luciferase-like monooxygenase 35 255 3.4E-38 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 XFC3_08015 4c5790b44c970d7d35e41db01e58cdca 321 Gene3D G3DSA:3.20.20.30 17 319 4.7E-68 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 XFC3_08015 4c5790b44c970d7d35e41db01e58cdca 321 SUPERFAMILY SSF51679 30 317 2.22E-63 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 XFC3_11850 c10c55371359ef547521ea0cfc1f66a2 138 Gene3D G3DSA:3.30.370.10 38 131 9.3E-9 T 11-10-2018 IPR035905 Barstar-like superfamily XFC3_11850 c10c55371359ef547521ea0cfc1f66a2 138 SUPERFAMILY SSF52038 39 130 3.01E-22 T 11-10-2018 IPR035905 Barstar-like superfamily XFC3_11850 c10c55371359ef547521ea0cfc1f66a2 138 Pfam PF01337 Barstar (barnase inhibitor) 42 125 1.5E-22 T 11-10-2018 IPR000468 Barstar (barnase inhibitor) XFC3_03535 aadf888bce613b022ece0cd407c61be4 243 Gene3D G3DSA:1.20.1440.120 82 242 2.6E-38 T 11-10-2018 XFC3_03535 aadf888bce613b022ece0cd407c61be4 243 Pfam PF02565 Recombination protein O C terminal 84 231 3.8E-20 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 XFC3_03535 aadf888bce613b022ece0cd407c61be4 243 Pfam PF11967 Recombination protein O N terminal 5 78 5.3E-17 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal XFC3_03535 aadf888bce613b022ece0cd407c61be4 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 153 5.2E-21 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 XFC3_03535 aadf888bce613b022ece0cd407c61be4 243 SUPERFAMILY SSF50249 5 78 3.6E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_03535 aadf888bce613b022ece0cd407c61be4 243 Hamap MF_00201 DNA repair protein RecO [recO]. 2 236 18.37 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 XFC3_03535 aadf888bce613b022ece0cd407c61be4 243 Gene3D G3DSA:2.40.50.140 4 80 3.8E-24 T 11-10-2018 XFC3_06430 069745ca1fe6d9559ad18a62b1bb5c5d 346 SUPERFAMILY SSF63829 46 342 1.98E-58 T 11-10-2018 XFC3_06430 069745ca1fe6d9559ad18a62b1bb5c5d 346 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 73 295 6.2E-33 T 11-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region XFC3_06430 069745ca1fe6d9559ad18a62b1bb5c5d 346 Gene3D G3DSA:2.120.10.30 25 346 6.4E-107 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XFC3_12260 eded60b8a0d4352c40a64a2e02ae20bd 473 SUPERFAMILY SSF116734 218 443 1.96E-33 T 11-10-2018 XFC3_12260 eded60b8a0d4352c40a64a2e02ae20bd 473 Gene3D G3DSA:3.90.220.20 236 385 1.3E-48 T 11-10-2018 XFC3_12260 eded60b8a0d4352c40a64a2e02ae20bd 473 SUPERFAMILY SSF116734 8 215 5.4E-24 T 11-10-2018 XFC3_12260 eded60b8a0d4352c40a64a2e02ae20bd 473 Gene3D G3DSA:3.90.220.20 21 436 1.3E-48 T 11-10-2018 XFC3_12260 eded60b8a0d4352c40a64a2e02ae20bd 473 Gene3D G3DSA:1.10.287.1120 164 432 1.3E-48 T 11-10-2018 XFC3_02490 fd62984ef24fa4b8a2d3e415a28da91c 88 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 15.424 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XFC3_02490 fd62984ef24fa4b8a2d3e415a28da91c 88 Pfam PF02609 Exonuclease VII small subunit 15 65 1.6E-18 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XFC3_02490 fd62984ef24fa4b8a2d3e415a28da91c 88 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 15 67 1.4E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XFC3_02490 fd62984ef24fa4b8a2d3e415a28da91c 88 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 26 53 5.0E-10 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XFC3_02490 fd62984ef24fa4b8a2d3e415a28da91c 88 SUPERFAMILY SSF116842 14 71 6.93E-18 T 11-10-2018 XFC3_02490 fd62984ef24fa4b8a2d3e415a28da91c 88 Gene3D G3DSA:1.10.287.1040 10 85 1.0E-22 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 XFC3_10520 b649345f61a22ea7cf122dc5d6c15214 282 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 282 6.4E-140 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFC3_01610 8e56071d29cd354a987f9e5b237bdbc2 60 TIGRFAM TIGR04560 ribo_THX: ribosomal small subunit protein bTHX 1 24 3.3E-13 T 11-10-2018 IPR030826 30S ribosomal protein GO:0005840 XFC3_01610 8e56071d29cd354a987f9e5b237bdbc2 60 Pfam PF17067 Ribosomal protein S31e 2 36 8.9E-9 T 11-10-2018 IPR030826 30S ribosomal protein GO:0005840 XFC3_11695 24a6877297f024abb27be436b4ed6f32 405 SUPERFAMILY SSF47384 197 239 3.34E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFC3_11695 24a6877297f024abb27be436b4ed6f32 405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 400 3.1E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_11695 24a6877297f024abb27be436b4ed6f32 405 SMART SM00387 293 401 5.8E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_11695 24a6877297f024abb27be436b4ed6f32 405 SUPERFAMILY SSF55874 268 399 4.98E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_11695 24a6877297f024abb27be436b4ed6f32 405 Gene3D G3DSA:1.10.287.130 176 259 5.4E-6 T 11-10-2018 XFC3_11695 24a6877297f024abb27be436b4ed6f32 405 Gene3D G3DSA:3.30.565.10 260 404 3.7E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_06605 01184df2befabbfe1ab1c7f8183168fc 274 Gene3D G3DSA:3.90.550.10 7 254 2.0E-38 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_06605 01184df2befabbfe1ab1c7f8183168fc 274 Pfam PF00535 Glycosyl transferase family 2 13 137 4.8E-21 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XFC3_06605 01184df2befabbfe1ab1c7f8183168fc 274 SUPERFAMILY SSF53448 10 220 6.43E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_02175 c4e6bccfd446415f1fe52558daf1787c 351 SUPERFAMILY SSF56042 176 343 3.29E-55 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFC3_02175 c4e6bccfd446415f1fe52558daf1787c 351 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 340 1.3E-135 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFC3_02175 c4e6bccfd446415f1fe52558daf1787c 351 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 341 1.3E-35 T 11-10-2018 IPR010918 PurM-like, C-terminal domain XFC3_02175 c4e6bccfd446415f1fe52558daf1787c 351 Gene3D G3DSA:3.90.650.10 176 350 9.6E-60 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFC3_02175 c4e6bccfd446415f1fe52558daf1787c 351 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 152 4.9E-14 T 11-10-2018 IPR016188 PurM-like, N-terminal domain XFC3_02175 c4e6bccfd446415f1fe52558daf1787c 351 SUPERFAMILY SSF55326 12 174 2.84E-51 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFC3_02175 c4e6bccfd446415f1fe52558daf1787c 351 Gene3D G3DSA:3.30.1330.10 11 175 8.7E-68 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFC3_02175 c4e6bccfd446415f1fe52558daf1787c 351 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 350 45.338 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFC3_08095 eb63d373b97d7081d91e47bdf45194bf 301 Gene3D G3DSA:1.10.357.140 13 191 7.7E-18 T 11-10-2018 XFC3_08095 eb63d373b97d7081d91e47bdf45194bf 301 Pfam PF01040 UbiA prenyltransferase family 21 273 5.2E-55 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 XFC3_08095 eb63d373b97d7081d91e47bdf45194bf 301 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 4 292 19.498 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 XFC3_08095 eb63d373b97d7081d91e47bdf45194bf 301 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 62 84 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site XFC3_08095 eb63d373b97d7081d91e47bdf45194bf 301 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 6 290 9.4E-90 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 XFC3_07140 af73accf36d90172f1314c01951289e5 303 Pfam PF03547 Membrane transport protein 151 293 3.6E-8 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 XFC3_07195 8be1135092b5a174ed340ab6138b8515 99 SUPERFAMILY SSF63562 1 78 7.98E-25 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XFC3_07195 8be1135092b5a174ed340ab6138b8515 99 Pfam PF01192 RNA polymerase Rpb6 8 60 2.2E-16 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XFC3_07195 8be1135092b5a174ed340ab6138b8515 99 SMART SM01409 8 62 7.8E-17 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XFC3_07195 8be1135092b5a174ed340ab6138b8515 99 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 63 17.729 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_07195 8be1135092b5a174ed340ab6138b8515 99 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.9E-20 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFC3_07195 8be1135092b5a174ed340ab6138b8515 99 Gene3D G3DSA:3.90.940.10 1 94 4.7E-28 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XFC3_12485 31a3569d87114f277d4e5b0da0078ee0 100 PIRSF PIRSF028744 1 100 6.0E-36 T 11-10-2018 IPR014056 Addiction module killer protein, predicted XFC3_12485 31a3569d87114f277d4e5b0da0078ee0 100 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 96 9.1E-7 T 11-10-2018 IPR009241 Toxin HigB-like XFC3_12485 31a3569d87114f277d4e5b0da0078ee0 100 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 97 9.8E-37 T 11-10-2018 IPR014056 Addiction module killer protein, predicted XFC3_01380 93ed67134c4fbb418047a01cbec96ad8 501 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 495 1.1E-191 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01380 93ed67134c4fbb418047a01cbec96ad8 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 9.2E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01380 93ed67134c4fbb418047a01cbec96ad8 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 386 412 9.2E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01380 93ed67134c4fbb418047a01cbec96ad8 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 9.2E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01380 93ed67134c4fbb418047a01cbec96ad8 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 135 154 9.2E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01380 93ed67134c4fbb418047a01cbec96ad8 501 Pfam PF00361 Proton-conducting membrane transporter 129 429 7.8E-78 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_08110 a08ffba12d0267fcebe5f16b27149c77 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 7 251 1.5E-111 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 XFC3_08110 a08ffba12d0267fcebe5f16b27149c77 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 1 252 40.823 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 XFC3_08110 a08ffba12d0267fcebe5f16b27149c77 255 Gene3D G3DSA:3.40.50.1820 1 254 8.3E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_08110 a08ffba12d0267fcebe5f16b27149c77 255 SUPERFAMILY SSF53474 3 251 1.54E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_08110 a08ffba12d0267fcebe5f16b27149c77 255 Pfam PF12697 Alpha/beta hydrolase family 12 242 1.1E-19 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFC3_01085 8f45cb995db7cfeb8a5aeaf4a14893bd 316 Pfam PF01012 Electron transfer flavoprotein domain 5 174 2.2E-31 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 XFC3_01085 8f45cb995db7cfeb8a5aeaf4a14893bd 316 SUPERFAMILY SSF52467 194 311 8.88E-47 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily XFC3_01085 8f45cb995db7cfeb8a5aeaf4a14893bd 316 PIRSF PIRSF000089 1 316 7.7E-108 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 XFC3_01085 8f45cb995db7cfeb8a5aeaf4a14893bd 316 SMART SM00893 4 187 1.0E-29 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 XFC3_01085 8f45cb995db7cfeb8a5aeaf4a14893bd 316 Gene3D G3DSA:3.40.50.620 4 187 9.8E-41 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_01085 8f45cb995db7cfeb8a5aeaf4a14893bd 316 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 195 277 1.7E-35 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 XFC3_01085 8f45cb995db7cfeb8a5aeaf4a14893bd 316 SUPERFAMILY SSF52402 4 184 4.12E-40 T 11-10-2018 XFC3_01085 8f45cb995db7cfeb8a5aeaf4a14893bd 316 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 258 284 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 XFC3_01085 8f45cb995db7cfeb8a5aeaf4a14893bd 316 Gene3D G3DSA:3.40.50.1220 190 316 4.4E-54 T 11-10-2018 XFC3_01455 a277f1cc83343004def6510fd541da40 69 Pfam PF07120 Protein of unknown function (DUF1376) 14 57 1.1E-7 T 11-10-2018 IPR010781 Protein of unknown function DUF1376 XFC3_12020 0a06309fe6e07880b703db71b4d62ff5 175 Gene3D G3DSA:3.40.50.1820 1 175 2.5E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_12020 0a06309fe6e07880b703db71b4d62ff5 175 SUPERFAMILY SSF53474 4 172 6.34E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_07030 c457b2b25df163f517abe15be89261e7 142 PIRSF PIRSF002181 1 142 3.8E-48 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 XFC3_07030 c457b2b25df163f517abe15be89261e7 142 SUPERFAMILY SSF52161 1 140 1.83E-56 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 XFC3_07030 c457b2b25df163f517abe15be89261e7 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 3 142 1.9E-59 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_07030 c457b2b25df163f517abe15be89261e7 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.209 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 XFC3_07030 c457b2b25df163f517abe15be89261e7 142 Gene3D G3DSA:3.90.1180.10 1 142 1.8E-59 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 XFC3_07030 c457b2b25df163f517abe15be89261e7 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 XFC3_07030 c457b2b25df163f517abe15be89261e7 142 Pfam PF00572 Ribosomal protein L13 15 138 1.2E-51 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 XFC3_04840 8ac643a3013df501251a64d0374c10a2 362 Gene3D G3DSA:3.30.470.10 28 356 2.1E-130 T 11-10-2018 XFC3_04840 8ac643a3013df501251a64d0374c10a2 362 ProSitePatterns PS00770 Aminotransferases class-IV signature. 236 266 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 XFC3_04840 8ac643a3013df501251a64d0374c10a2 362 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 47 359 8.8E-147 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 XFC3_04840 8ac643a3013df501251a64d0374c10a2 362 Gene3D G3DSA:3.20.10.10 174 343 2.1E-130 T 11-10-2018 XFC3_04840 8ac643a3013df501251a64d0374c10a2 362 Pfam PF01063 Amino-transferase class IV 73 316 1.6E-33 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 XFC3_04840 8ac643a3013df501251a64d0374c10a2 362 PIRSF PIRSF006468 4 362 2.0E-130 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 XFC3_04840 8ac643a3013df501251a64d0374c10a2 362 SUPERFAMILY SSF56752 3 357 5.36E-111 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 XFC3_12275 138de812fadec7fe572b634b3f262b5c 445 Gene3D G3DSA:3.90.220.20 231 434 1.6E-29 T 11-10-2018 XFC3_12275 138de812fadec7fe572b634b3f262b5c 445 Gene3D G3DSA:3.90.220.20 17 161 4.9E-34 T 11-10-2018 XFC3_12275 138de812fadec7fe572b634b3f262b5c 445 SUPERFAMILY SSF116734 6 209 9.48E-40 T 11-10-2018 XFC3_12275 138de812fadec7fe572b634b3f262b5c 445 Pfam PF01420 Type I restriction modification DNA specificity domain 15 193 6.7E-27 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XFC3_12275 138de812fadec7fe572b634b3f262b5c 445 Pfam PF01420 Type I restriction modification DNA specificity domain 246 424 5.1E-15 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XFC3_12275 138de812fadec7fe572b634b3f262b5c 445 SUPERFAMILY SSF116734 237 442 3.6E-33 T 11-10-2018 XFC3_08705 05928c7b83f022af04cbbbcbf529fe9c 185 Pfam PF07209 Protein of unknown function (DUF1415) 11 176 1.3E-67 T 11-10-2018 IPR009858 Protein of unknown function DUF1415 XFC3_03965 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 SUPERFAMILY SSF48452 136 252 9.25E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_03965 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 Pfam PF14561 Tetratricopeptide repeat 203 286 7.2E-19 T 11-10-2018 XFC3_03965 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 Pfam PF14559 Tetratricopeptide repeat 136 193 1.9E-6 T 11-10-2018 XFC3_03965 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 Gene3D G3DSA:3.40.30.10 1 111 1.5E-31 T 11-10-2018 XFC3_03965 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 Pfam PF00085 Thioredoxin 7 111 1.2E-25 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 XFC3_03965 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XFC3_03965 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 Gene3D G3DSA:1.25.40.10 132 195 1.4E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_03965 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 SUPERFAMILY SSF52833 5 111 1.27E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_03965 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 Gene3D G3DSA:1.25.40.10 200 286 6.1E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_01745 d046821d17a4b58bccd4e5474e3d6d31 218 Gene3D G3DSA:3.10.450.710 34 210 4.7E-41 T 11-10-2018 XFC3_01745 d046821d17a4b58bccd4e5474e3d6d31 218 Pfam PF05494 MlaC protein 45 206 4.0E-43 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC XFC3_01745 d046821d17a4b58bccd4e5474e3d6d31 218 PIRSF PIRSF004649 9 218 1.6E-55 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC XFC3_10935 93a729f46083b9712f72beb21f484780 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_10935 93a729f46083b9712f72beb21f484780 361 Pfam PF00953 Glycosyl transferase family 4 99 285 2.4E-34 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 XFC3_10935 93a729f46083b9712f72beb21f484780 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 1.1E-129 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_10935 93a729f46083b9712f72beb21f484780 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_10935 93a729f46083b9712f72beb21f484780 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 24.581 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_04285 0e8307a385c213584866eef03a87ede4 339 Pfam PF00589 Phage integrase family 177 329 7.6E-16 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFC3_04285 0e8307a385c213584866eef03a87ede4 339 Gene3D G3DSA:1.10.150.130 64 168 4.4E-5 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFC3_04285 0e8307a385c213584866eef03a87ede4 339 SUPERFAMILY SSF56349 65 328 3.53E-46 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFC3_04285 0e8307a385c213584866eef03a87ede4 339 Gene3D G3DSA:1.10.443.10 170 335 9.4E-29 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFC3_10240 8f902ba236ea8ecf288a14c6b9ee4e2c 157 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 22 147 7.1E-41 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 XFC3_10240 8f902ba236ea8ecf288a14c6b9ee4e2c 157 Pfam PF01029 NusB family 24 146 7.3E-32 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 XFC3_10240 8f902ba236ea8ecf288a14c6b9ee4e2c 157 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 20 151 21.606 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 XFC3_10240 8f902ba236ea8ecf288a14c6b9ee4e2c 157 Gene3D G3DSA:1.10.940.10 15 154 9.2E-44 T 11-10-2018 IPR035926 NusB-like superfamily XFC3_10240 8f902ba236ea8ecf288a14c6b9ee4e2c 157 SUPERFAMILY SSF48013 21 149 1.23E-38 T 11-10-2018 IPR035926 NusB-like superfamily XFC3_09400 7080ef41896aee6327ba68b018310b56 160 Gene3D G3DSA:3.10.129.10 8 159 9.0E-54 T 11-10-2018 XFC3_09400 7080ef41896aee6327ba68b018310b56 160 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 16 159 33.419 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFC3_09400 7080ef41896aee6327ba68b018310b56 160 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 16 156 6.7E-63 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFC3_09400 7080ef41896aee6327ba68b018310b56 160 SUPERFAMILY SSF54637 15 156 6.43E-44 T 11-10-2018 IPR029069 HotDog domain superfamily XFC3_09400 7080ef41896aee6327ba68b018310b56 160 Pfam PF07977 FabA-like domain 25 150 1.6E-39 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFC3_01880 8ab464d78e8914b70bc4ac4d61735500 287 Gene3D G3DSA:3.30.479.30 48 187 1.3E-15 T 11-10-2018 XFC3_01880 8ab464d78e8914b70bc4ac4d61735500 287 PIRSF PIRSF005651 1 287 3.1E-77 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 XFC3_01880 8ab464d78e8914b70bc4ac4d61735500 287 SUPERFAMILY SSF117892 51 190 3.27E-19 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily XFC3_01880 8ab464d78e8914b70bc4ac4d61735500 287 Pfam PF01145 SPFH domain / Band 7 family 23 201 3.3E-24 T 11-10-2018 IPR001107 Band 7 domain XFC3_01880 8ab464d78e8914b70bc4ac4d61735500 287 SMART SM00244 19 184 2.4E-17 T 11-10-2018 IPR001107 Band 7 domain XFC3_09305 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 Hamap MF_00524 Glucokinase [glk]. 7 328 32.537 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XFC3_09305 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 SUPERFAMILY SSF53067 8 327 7.43E-58 T 11-10-2018 XFC3_09305 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 TIGRFAM TIGR00749 glk: glucokinase 9 322 1.6E-81 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XFC3_09305 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 Gene3D G3DSA:3.30.420.40 8 322 2.6E-95 T 11-10-2018 XFC3_09305 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 Gene3D G3DSA:3.40.367.20 107 311 2.6E-95 T 11-10-2018 XFC3_09305 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 Pfam PF02685 Glucokinase 9 327 1.3E-111 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XFC3_02495 4f85ac09a2a0c0f78e75301dd61f8595 291 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 210 222 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site XFC3_02495 4f85ac09a2a0c0f78e75301dd61f8595 291 Gene3D G3DSA:1.10.600.10 2 288 1.4E-89 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily XFC3_02495 4f85ac09a2a0c0f78e75301dd61f8595 291 Pfam PF00348 Polyprenyl synthetase 29 255 2.7E-54 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 XFC3_02495 4f85ac09a2a0c0f78e75301dd61f8595 291 SUPERFAMILY SSF48576 5 284 6.84E-82 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily XFC3_02495 4f85ac09a2a0c0f78e75301dd61f8595 291 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site XFC3_00630 b675e3b6b38c17f2a144d648b533fce4 155 Gene3D G3DSA:2.70.40.10 2 153 7.0E-46 T 11-10-2018 IPR036157 dUTPase-like superfamily XFC3_00630 b675e3b6b38c17f2a144d648b533fce4 155 Pfam PF00692 dUTPase 21 153 2.9E-34 T 11-10-2018 IPR029054 dUTPase-like XFC3_00630 b675e3b6b38c17f2a144d648b533fce4 155 SUPERFAMILY SSF51283 9 154 6.02E-49 T 11-10-2018 IPR036157 dUTPase-like superfamily XFC3_00630 b675e3b6b38c17f2a144d648b533fce4 155 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 10 154 31.891 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 XFC3_00630 b675e3b6b38c17f2a144d648b533fce4 155 TIGRFAM TIGR00576 dut: dUTP diphosphatase 16 153 2.0E-44 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 XFC3_10885 2388a72c1b10ca03a266a540147e3088 319 Pfam PF01551 Peptidase family M23 204 298 2.2E-31 T 11-10-2018 IPR016047 Peptidase M23 XFC3_10885 2388a72c1b10ca03a266a540147e3088 319 Gene3D G3DSA:2.70.70.10 148 305 8.1E-45 T 11-10-2018 IPR011055 Duplicated hybrid motif XFC3_10885 2388a72c1b10ca03a266a540147e3088 319 SUPERFAMILY SSF51261 92 302 1.05E-55 T 11-10-2018 IPR011055 Duplicated hybrid motif XFC3_11615 82962a301542be8d9a6b9fa78a364c2e 243 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 98 223 2.0E-36 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 XFC3_11615 82962a301542be8d9a6b9fa78a364c2e 243 Gene3D G3DSA:3.30.1400.10 94 232 3.7E-38 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 XFC3_11615 82962a301542be8d9a6b9fa78a364c2e 243 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 98 226 2.0E-70 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 XFC3_11615 82962a301542be8d9a6b9fa78a364c2e 243 SUPERFAMILY SSF64383 95 231 1.2E-34 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 XFC3_11615 82962a301542be8d9a6b9fa78a364c2e 243 SMART SM00771 95 225 2.4E-58 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 XFC3_11615 82962a301542be8d9a6b9fa78a364c2e 243 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 39 225 8.6E-69 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 XFC3_11615 82962a301542be8d9a6b9fa78a364c2e 243 Hamap MF_00509 Cell division protein ZipA [zipA]. 5 227 17.665 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 XFC3_01640 920324617f21dcabb64a2179e70a4915 482 SMART SM00387 369 482 3.6E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_01640 920324617f21dcabb64a2179e70a4915 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 480 1.6E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_01640 920324617f21dcabb64a2179e70a4915 482 Gene3D G3DSA:3.30.565.10 334 480 3.5E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_01640 920324617f21dcabb64a2179e70a4915 482 Gene3D G3DSA:1.10.287.130 219 324 5.2E-11 T 11-10-2018 XFC3_01640 920324617f21dcabb64a2179e70a4915 482 SUPERFAMILY SSF55874 318 479 2.23E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_01640 920324617f21dcabb64a2179e70a4915 482 SUPERFAMILY SSF47384 250 315 4.32E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFC3_01640 920324617f21dcabb64a2179e70a4915 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 2.0E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_01640 920324617f21dcabb64a2179e70a4915 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 2.0E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_01640 920324617f21dcabb64a2179e70a4915 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 2.0E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_03195 0e6a978905e0ab40fde031449dc8fd15 264 Gene3D G3DSA:3.30.572.10 1 264 3.6E-128 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFC3_03195 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 7.0E-50 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFC3_03195 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 7.0E-50 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFC3_03195 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 7.0E-50 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFC3_03195 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 7.0E-50 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFC3_03195 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 7.0E-50 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFC3_03195 0e6a978905e0ab40fde031449dc8fd15 264 SUPERFAMILY SSF55831 2 264 9.03E-127 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFC3_03195 0e6a978905e0ab40fde031449dc8fd15 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.148 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFC3_03195 0e6a978905e0ab40fde031449dc8fd15 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFC3_03195 0e6a978905e0ab40fde031449dc8fd15 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 4.6E-42 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFC3_03195 0e6a978905e0ab40fde031449dc8fd15 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 6.5E-99 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFC3_03195 0e6a978905e0ab40fde031449dc8fd15 264 Pfam PF00303 Thymidylate synthase 2 264 9.7E-121 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFC3_12170 ce173fa88d7a0d34c4bd772e1573dac7 743 SUPERFAMILY SSF53659 4 739 0.0 T 11-10-2018 XFC3_12170 ce173fa88d7a0d34c4bd772e1573dac7 743 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 3 739 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 XFC3_12170 ce173fa88d7a0d34c4bd772e1573dac7 743 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 738 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 XFC3_12170 ce173fa88d7a0d34c4bd772e1573dac7 743 PIRSF PIRSF009407 1 742 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 XFC3_12170 ce173fa88d7a0d34c4bd772e1573dac7 743 Gene3D G3DSA:3.40.718.10 418 658 3.5E-6 T 11-10-2018 XFC3_04355 cf6898780357b82747d470d6945c2b4c 941 Pfam PF13550 Putative phage tail protein 400 551 5.8E-10 T 11-10-2018 IPR032876 Tip attachment protein J XFC3_04355 cf6898780357b82747d470d6945c2b4c 941 SUPERFAMILY SSF53300 151 304 3.56E-13 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily XFC3_04355 cf6898780357b82747d470d6945c2b4c 941 Pfam PF00092 von Willebrand factor type A domain 155 287 5.7E-5 T 11-10-2018 IPR002035 von Willebrand factor, type A XFC3_04355 cf6898780357b82747d470d6945c2b4c 941 Gene3D G3DSA:3.40.50.410 153 337 5.2E-13 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily XFC3_08945 632ad1690aebf0c456c6a86dabeebf41 100 SUPERFAMILY SSF54189 7 99 3.6E-27 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08945 632ad1690aebf0c456c6a86dabeebf41 100 Pfam PF00276 Ribosomal protein L23 11 96 7.5E-27 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 XFC3_08945 632ad1690aebf0c456c6a86dabeebf41 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 9 99 20.808 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 XFC3_08945 632ad1690aebf0c456c6a86dabeebf41 100 Gene3D G3DSA:3.30.70.330 3 99 7.2E-31 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily XFC3_04010 e899499b20b1c44a8482228c409308ef 130 Pfam PF13274 Protein of unknown function (DUF4065) 2 80 2.7E-6 T 11-10-2018 IPR025272 Domain of unknown function DUF4065 XFC3_03740 da69584e72d78cc104fd6f5da6937dd0 462 Gene3D G3DSA:3.30.465.10 94 214 4.8E-41 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XFC3_03740 da69584e72d78cc104fd6f5da6937dd0 462 SUPERFAMILY SSF55103 189 461 4.09E-54 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 XFC3_03740 da69584e72d78cc104fd6f5da6937dd0 462 Gene3D G3DSA:3.30.43.10 1 92 2.1E-23 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 XFC3_03740 da69584e72d78cc104fd6f5da6937dd0 462 Pfam PF01565 FAD binding domain 40 178 2.8E-41 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 XFC3_03740 da69584e72d78cc104fd6f5da6937dd0 462 Gene3D G3DSA:3.30.70.2190 216 331 6.6E-24 T 11-10-2018 XFC3_03740 da69584e72d78cc104fd6f5da6937dd0 462 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 459 1.1E-54 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 XFC3_03740 da69584e72d78cc104fd6f5da6937dd0 462 Gene3D G3DSA:1.10.45.10 420 460 3.4E-15 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 XFC3_03740 da69584e72d78cc104fd6f5da6937dd0 462 Gene3D G3DSA:3.30.70.2740 334 419 2.9E-25 T 11-10-2018 XFC3_03740 da69584e72d78cc104fd6f5da6937dd0 462 SUPERFAMILY SSF56176 5 216 1.27E-66 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XFC3_11915 f42344b237f521f1564c6e6094928a46 175 Pfam PF00466 Ribosomal protein L10 7 101 7.8E-24 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 XFC3_11915 f42344b237f521f1564c6e6094928a46 175 Gene3D G3DSA:3.30.70.1730 6 168 4.4E-29 T 11-10-2018 XFC3_11915 f42344b237f521f1564c6e6094928a46 175 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 11-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11915 f42344b237f521f1564c6e6094928a46 175 SUPERFAMILY SSF160369 7 160 5.89E-41 T 11-10-2018 XFC3_11915 f42344b237f521f1564c6e6094928a46 175 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 25.025 T 11-10-2018 IPR022973 Ribosomal protein L10 XFC3_11815 27daecd66e429f266005ebce25057a26 330 Pfam PF01479 S4 domain 30 76 2.9E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_11815 27daecd66e429f266005ebce25057a26 330 SUPERFAMILY SSF55120 100 329 2.24E-55 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_11815 27daecd66e429f266005ebce25057a26 330 Gene3D G3DSA:3.10.290.10 19 81 2.1E-18 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XFC3_11815 27daecd66e429f266005ebce25057a26 330 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 26 329 1.7E-68 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_11815 27daecd66e429f266005ebce25057a26 330 Pfam PF00849 RNA pseudouridylate synthase 111 266 5.6E-26 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_11815 27daecd66e429f266005ebce25057a26 330 SUPERFAMILY SSF55174 29 80 3.4E-10 T 11-10-2018 XFC3_11815 27daecd66e429f266005ebce25057a26 330 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 148 162 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFC3_11815 27daecd66e429f266005ebce25057a26 330 Gene3D G3DSA:3.30.2350.10 102 330 2.6E-65 T 11-10-2018 XFC3_11815 27daecd66e429f266005ebce25057a26 330 SMART SM00363 30 89 7.1E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_01865 48499087651f33088bab12a373e851bb 128 SUPERFAMILY SSF52172 1 121 1.21E-37 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_01865 48499087651f33088bab12a373e851bb 128 Gene3D G3DSA:3.40.50.12740 1 128 1.2E-41 T 11-10-2018 XFC3_01865 48499087651f33088bab12a373e851bb 128 Pfam PF00072 Response regulator receiver domain 4 114 7.9E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_01865 48499087651f33088bab12a373e851bb 128 SMART SM00448 2 115 3.9E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_05345 7d9f1bf9505fa775e7cfb81d87180301 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 198 1.1E-55 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XFC3_05345 7d9f1bf9505fa775e7cfb81d87180301 214 SMART SM00855 2 158 6.2E-21 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XFC3_05345 7d9f1bf9505fa775e7cfb81d87180301 214 SUPERFAMILY SSF53254 1 203 2.36E-54 T 11-10-2018 IPR029033 Histidine phosphatase superfamily XFC3_05345 7d9f1bf9505fa775e7cfb81d87180301 214 Gene3D G3DSA:3.40.50.1240 1 212 1.1E-54 T 11-10-2018 IPR029033 Histidine phosphatase superfamily XFC3_05345 7d9f1bf9505fa775e7cfb81d87180301 214 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 XFC3_05345 7d9f1bf9505fa775e7cfb81d87180301 214 PIRSF PIRSF000709 1 187 7.8E-12 T 11-10-2018 XFC3_10515 9eb564354732c4e4a006371a03d1d2b1 282 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 282 1.4E-139 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFC3_05020 b8dfde7d9bd5359cbe6bb5774e1519c9 138 SUPERFAMILY SSF52172 13 132 4.13E-35 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_05020 b8dfde7d9bd5359cbe6bb5774e1519c9 138 SMART SM00448 14 127 8.3E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_05020 b8dfde7d9bd5359cbe6bb5774e1519c9 138 Gene3D G3DSA:3.40.50.12740 13 137 4.8E-37 T 11-10-2018 XFC3_05020 b8dfde7d9bd5359cbe6bb5774e1519c9 138 Pfam PF00072 Response regulator receiver domain 16 128 6.6E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_02955 23204803407d277c4af4bdbcf8a5b3b1 424 Pfam PF00155 Aminotransferase class I and II 39 399 1.8E-45 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XFC3_02955 23204803407d277c4af4bdbcf8a5b3b1 424 Gene3D G3DSA:3.90.1150.10 28 402 5.1E-117 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFC3_02955 23204803407d277c4af4bdbcf8a5b3b1 424 Gene3D G3DSA:3.40.640.10 58 299 5.1E-117 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFC3_02955 23204803407d277c4af4bdbcf8a5b3b1 424 SUPERFAMILY SSF53383 12 405 2.42E-87 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFC3_06375 d9ec9352b37a673d97a228c91a701f5e 616 Pfam PF07514 Putative helicase 27 340 1.7E-128 T 11-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative XFC3_06375 d9ec9352b37a673d97a228c91a701f5e 616 Gene3D G3DSA:1.10.3210.40 31 250 3.4E-40 T 11-10-2018 XFC3_06375 d9ec9352b37a673d97a228c91a701f5e 616 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 489 611 3.7E-48 T 11-10-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal XFC3_06375 d9ec9352b37a673d97a228c91a701f5e 616 SUPERFAMILY SSF46785 486 612 2.04E-43 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_06375 d9ec9352b37a673d97a228c91a701f5e 616 Gene3D G3DSA:2.40.10.200 506 606 4.2E-26 T 11-10-2018 XFC3_06375 d9ec9352b37a673d97a228c91a701f5e 616 Gene3D G3DSA:1.10.10.10 490 560 4.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_06375 d9ec9352b37a673d97a228c91a701f5e 616 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 26 243 2.9E-88 T 11-10-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class XFC3_00095 1a4092e7b17fe706f8dc8db22382f556 364 PIRSF PIRSF001361 3 351 1.5E-156 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 XFC3_00095 1a4092e7b17fe706f8dc8db22382f556 364 Gene3D G3DSA:3.20.20.70 3 350 1.2E-158 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_00095 1a4092e7b17fe706f8dc8db22382f556 364 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 348 1.3E-158 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 XFC3_00095 1a4092e7b17fe706f8dc8db22382f556 364 Pfam PF00793 DAHP synthetase I family 41 338 7.6E-97 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XFC3_00095 1a4092e7b17fe706f8dc8db22382f556 364 SUPERFAMILY SSF51569 7 348 4.08E-134 T 11-10-2018 XFC3_07750 dd270b98d179612d312da01936a13d19 152 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XFC3_07750 dd270b98d179612d312da01936a13d19 152 Pfam PF00293 NUDIX domain 12 119 1.0E-12 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XFC3_07750 dd270b98d179612d312da01936a13d19 152 SUPERFAMILY SSF55811 6 139 8.67E-27 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XFC3_07750 dd270b98d179612d312da01936a13d19 152 Gene3D G3DSA:3.90.79.10 4 151 9.2E-36 T 11-10-2018 XFC3_06535 17e054d48b98b59d2ad0b3ee14c2a501 653 Pfam PF13356 Arm DNA-binding domain 3 87 1.6E-16 T 11-10-2018 IPR025166 Integrase, DNA-binding domain XFC3_06535 17e054d48b98b59d2ad0b3ee14c2a501 653 Gene3D G3DSA:3.30.160.390 1 99 1.1E-29 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily XFC3_06535 17e054d48b98b59d2ad0b3ee14c2a501 653 Gene3D G3DSA:1.10.150.130 100 209 1.9E-24 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFC3_06535 17e054d48b98b59d2ad0b3ee14c2a501 653 SUPERFAMILY SSF56349 99 401 2.03E-48 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFC3_06535 17e054d48b98b59d2ad0b3ee14c2a501 653 Pfam PF00589 Phage integrase family 215 391 6.7E-16 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFC3_06535 17e054d48b98b59d2ad0b3ee14c2a501 653 Gene3D G3DSA:1.10.443.10 211 402 4.1E-12 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFC3_06535 17e054d48b98b59d2ad0b3ee14c2a501 653 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 150 5.0E-5 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XFC3_10850 cf83b4b07fe5aad9af0971d04533ac35 552 Pfam PF02225 PA domain 133 218 1.9E-7 T 11-10-2018 IPR003137 PA domain XFC3_10850 cf83b4b07fe5aad9af0971d04533ac35 552 SUPERFAMILY SSF52025 133 216 6.02E-8 T 11-10-2018 XFC3_10850 cf83b4b07fe5aad9af0971d04533ac35 552 Pfam PF04389 Peptidase family M28 300 515 1.3E-48 T 11-10-2018 IPR007484 Peptidase M28 XFC3_10850 cf83b4b07fe5aad9af0971d04533ac35 552 Gene3D G3DSA:3.40.630.10 248 526 2.3E-50 T 11-10-2018 XFC3_10850 cf83b4b07fe5aad9af0971d04533ac35 552 SUPERFAMILY SSF53187 23 526 4.89E-62 T 11-10-2018 XFC3_07885 650f688a9d2a03576034686f8f10aca2 240 Gene3D G3DSA:3.40.50.300 1 240 3.2E-69 T 11-10-2018 XFC3_07885 650f688a9d2a03576034686f8f10aca2 240 Pfam PF00005 ABC transporter 20 165 2.6E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_07885 650f688a9d2a03576034686f8f10aca2 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 2 240 8.6E-114 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 XFC3_07885 650f688a9d2a03576034686f8f10aca2 240 SMART SM00382 26 212 1.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_07885 650f688a9d2a03576034686f8f10aca2 240 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 235 1.4E-6 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal XFC3_07885 650f688a9d2a03576034686f8f10aca2 240 SUPERFAMILY SSF52540 2 236 1.92E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_05270 6f429e2b84823fcc53981a5f4933910e 141 SUPERFAMILY SSF54637 7 137 2.39E-34 T 11-10-2018 IPR029069 HotDog domain superfamily XFC3_05270 6f429e2b84823fcc53981a5f4933910e 141 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 9 132 9.7E-46 T 11-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 XFC3_05270 6f429e2b84823fcc53981a5f4933910e 141 Gene3D G3DSA:3.10.129.10 1 138 3.7E-32 T 11-10-2018 XFC3_05270 6f429e2b84823fcc53981a5f4933910e 141 PIRSF PIRSF003230 1 140 5.7E-38 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 XFC3_05270 6f429e2b84823fcc53981a5f4933910e 141 Pfam PF03061 Thioesterase superfamily 24 107 6.9E-17 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 XFC3_05270 6f429e2b84823fcc53981a5f4933910e 141 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 13 127 1.4E-27 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 XFC3_07175 da3a652501163abe950856fefed7a2ac 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 194 4.5E-52 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 XFC3_07175 da3a652501163abe950856fefed7a2ac 199 Gene3D G3DSA:3.90.950.10 1 197 3.0E-71 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XFC3_07175 da3a652501163abe950856fefed7a2ac 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 47.44 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 XFC3_07175 da3a652501163abe950856fefed7a2ac 199 Pfam PF01725 Ham1 family 4 192 8.5E-52 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 XFC3_07175 da3a652501163abe950856fefed7a2ac 199 SUPERFAMILY SSF52972 1 195 7.85E-70 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XFC3_01900 3ce1910c168a100162462089bca2047c 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.616 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFC3_01900 3ce1910c168a100162462089bca2047c 141 SUPERFAMILY SSF54919 1 138 2.75E-54 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFC3_01900 3ce1910c168a100162462089bca2047c 141 SMART SM00562 3 140 7.4E-80 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFC3_01900 3ce1910c168a100162462089bca2047c 141 Gene3D G3DSA:3.30.70.141 1 140 1.2E-53 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFC3_01900 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 5.7E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFC3_01900 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 5.7E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFC3_01900 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 5.7E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFC3_01900 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 5.7E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFC3_01900 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 5.7E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFC3_01900 3ce1910c168a100162462089bca2047c 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFC3_01900 3ce1910c168a100162462089bca2047c 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.6E-52 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFC3_12080 f03d4f7258f213e23af160588ae08e0b 328 PIRSF PIRSF028415 1 327 3.7E-201 T 11-10-2018 IPR014545 Uncharacterised conserved protein UCP028415 XFC3_12080 f03d4f7258f213e23af160588ae08e0b 328 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 96 305 1.3E-103 T 11-10-2018 IPR019262 Domain of unknown function DUF2272 XFC3_11810 8e8dd78108e24c0fdb737b81f25a8998 137 Gene3D G3DSA:3.30.1150.10 19 117 1.6E-22 T 11-10-2018 XFC3_11810 8e8dd78108e24c0fdb737b81f25a8998 137 SUPERFAMILY SSF74653 35 116 6.54E-20 T 11-10-2018 XFC3_11810 8e8dd78108e24c0fdb737b81f25a8998 137 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 42 118 7.2E-21 T 11-10-2018 IPR006260 TonB/TolA, C-terminal XFC3_11810 8e8dd78108e24c0fdb737b81f25a8998 137 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 40 117 4.6E-20 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 XFC3_09360 714dfc2d36bc5a3d55907dd72fe7575b 447 Gene3D G3DSA:2.40.160.60 30 447 1.3E-115 T 11-10-2018 XFC3_09360 714dfc2d36bc5a3d55907dd72fe7575b 447 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 21 447 5.4E-145 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) XFC3_09360 714dfc2d36bc5a3d55907dd72fe7575b 447 SUPERFAMILY SSF56935 30 447 2.66E-77 T 11-10-2018 XFC3_06055 32c850f955a50d339a246d0505d3eb28 319 Pfam PF01882 Protein of unknown function DUF58 213 287 7.7E-13 T 11-10-2018 IPR002881 Domain of unknown function DUF58 XFC3_00585 4125560b4ceae9e58970870d30d19e53 609 Gene3D G3DSA:3.60.20.10 2 239 2.0E-75 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFC3_00585 4125560b4ceae9e58970870d30d19e53 609 Gene3D G3DSA:3.40.50.10490 447 594 5.5E-139 T 11-10-2018 XFC3_00585 4125560b4ceae9e58970870d30d19e53 609 SUPERFAMILY SSF53697 244 609 2.04E-110 T 11-10-2018 XFC3_00585 4125560b4ceae9e58970870d30d19e53 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 3.6E-261 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 XFC3_00585 4125560b4ceae9e58970870d30d19e53 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 38.509 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 XFC3_00585 4125560b4ceae9e58970870d30d19e53 609 Pfam PF13522 Glutamine amidotransferase domain 63 192 2.3E-21 T 11-10-2018 XFC3_00585 4125560b4ceae9e58970870d30d19e53 609 Pfam PF01380 SIS domain 295 417 7.1E-29 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XFC3_00585 4125560b4ceae9e58970870d30d19e53 609 Pfam PF01380 SIS domain 463 591 4.6E-26 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XFC3_00585 4125560b4ceae9e58970870d30d19e53 609 Gene3D G3DSA:3.40.50.10490 248 608 5.5E-139 T 11-10-2018 XFC3_00585 4125560b4ceae9e58970870d30d19e53 609 SUPERFAMILY SSF56235 2 233 1.03E-70 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFC3_02670 eb6a5b4ee38758cb7c29c139e649e290 204 Pfam PF00005 ABC transporter 18 155 4.6E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_02670 eb6a5b4ee38758cb7c29c139e649e290 204 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 1 196 5.3E-75 T 11-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 XFC3_02670 eb6a5b4ee38758cb7c29c139e649e290 204 SMART SM00382 25 204 6.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_02670 eb6a5b4ee38758cb7c29c139e649e290 204 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_02670 eb6a5b4ee38758cb7c29c139e649e290 204 SUPERFAMILY SSF52540 4 187 1.95E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02670 eb6a5b4ee38758cb7c29c139e649e290 204 Gene3D G3DSA:3.40.50.300 1 203 8.2E-40 T 11-10-2018 XFC3_07730 042131f8415478c655e915884b451c95 243 Gene3D G3DSA:3.40.630.70 65 238 6.2E-58 T 11-10-2018 XFC3_07730 042131f8415478c655e915884b451c95 243 Gene3D G3DSA:2.30.210.20 8 64 9.3E-25 T 11-10-2018 XFC3_07730 042131f8415478c655e915884b451c95 243 SUPERFAMILY SSF55729 10 231 2.81E-85 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFC3_07730 042131f8415478c655e915884b451c95 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 222 2.0E-55 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 XFC3_07730 042131f8415478c655e915884b451c95 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 38 208 2.9E-67 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 XFC3_07730 042131f8415478c655e915884b451c95 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 89.513 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 XFC3_02275 a06f1f5f8e0fe4a80cf70ef0247fab39 305 Gene3D G3DSA:3.40.50.720 9 290 1.1E-84 T 11-10-2018 XFC3_02275 a06f1f5f8e0fe4a80cf70ef0247fab39 305 Gene3D G3DSA:3.90.25.10 178 297 1.1E-84 T 11-10-2018 XFC3_02275 a06f1f5f8e0fe4a80cf70ef0247fab39 305 Pfam PF16363 GDP-mannose 4,6 dehydratase 10 286 1.3E-41 T 11-10-2018 IPR016040 NAD(P)-binding domain XFC3_02275 a06f1f5f8e0fe4a80cf70ef0247fab39 305 SUPERFAMILY SSF51735 3 302 1.94E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_00255 bf0b252cd2e4a0c2e08bbe00078abefa 346 Gene3D G3DSA:3.40.1090.10 142 258 3.1E-17 T 11-10-2018 XFC3_00255 bf0b252cd2e4a0c2e08bbe00078abefa 346 Gene3D G3DSA:3.40.1090.10 29 141 1.7E-22 T 11-10-2018 XFC3_00255 bf0b252cd2e4a0c2e08bbe00078abefa 346 SUPERFAMILY SSF52151 40 296 7.85E-60 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XFC3_00255 bf0b252cd2e4a0c2e08bbe00078abefa 346 Pfam PF01734 Patatin-like phospholipase 50 206 6.2E-28 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 XFC3_04605 988916a9a453b0df84550f70df5305cd 189 Gene3D G3DSA:3.40.50.300 1 157 2.5E-28 T 11-10-2018 XFC3_04605 988916a9a453b0df84550f70df5305cd 189 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 1 172 1.1E-49 T 11-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 XFC3_04605 988916a9a453b0df84550f70df5305cd 189 SUPERFAMILY SSF52540 2 163 6.37E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08790 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 4.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFC3_08790 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 4.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFC3_08790 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 4.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFC3_08790 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 4.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFC3_08790 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 4.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFC3_08790 f8c107eae354b5c508d916e207caab04 208 SUPERFAMILY SSF52096 17 200 5.39E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFC3_08790 f8c107eae354b5c508d916e207caab04 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 11-10-2018 IPR033135 ClpP, histidine active site XFC3_08790 f8c107eae354b5c508d916e207caab04 208 Gene3D G3DSA:3.90.226.10 2 202 1.9E-82 T 11-10-2018 XFC3_08790 f8c107eae354b5c508d916e207caab04 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 43.433 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFC3_08790 f8c107eae354b5c508d916e207caab04 208 Pfam PF00574 Clp protease 19 199 2.9E-86 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA XFC3_08790 f8c107eae354b5c508d916e207caab04 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 197 1.2E-104 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFC3_08790 f8c107eae354b5c508d916e207caab04 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 11-10-2018 IPR018215 ClpP, Ser active site XFC3_09605 96399345de3e6063a69a357db257fd37 554 Pfam PF00990 Diguanylate cyclase, GGDEF domain 393 549 6.4E-39 T 11-10-2018 IPR000160 GGDEF domain XFC3_09605 96399345de3e6063a69a357db257fd37 554 SUPERFAMILY SSF55073 398 551 5.96E-43 T 11-10-2018 IPR029787 Nucleotide cyclase XFC3_09605 96399345de3e6063a69a357db257fd37 554 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 393 551 1.5E-42 T 11-10-2018 IPR000160 GGDEF domain XFC3_09605 96399345de3e6063a69a357db257fd37 554 SMART SM00267 382 553 2.5E-50 T 11-10-2018 IPR000160 GGDEF domain XFC3_09605 96399345de3e6063a69a357db257fd37 554 Pfam PF07696 7TMR-DISM extracellular 2 65 157 5.2E-6 T 11-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 XFC3_09605 96399345de3e6063a69a357db257fd37 554 Gene3D G3DSA:3.30.70.270 387 553 1.6E-51 T 11-10-2018 XFC3_09605 96399345de3e6063a69a357db257fd37 554 Pfam PF07695 7TM diverse intracellular signalling 171 377 3.9E-22 T 11-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 XFC3_09250 018ca9591a13bb76da17bcd3f9a300f3 413 Pfam PF02687 FtsX-like permease family 300 406 5.5E-13 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 XFC3_09250 018ca9591a13bb76da17bcd3f9a300f3 413 Pfam PF12704 MacB-like periplasmic core domain 28 226 2.5E-14 T 11-10-2018 IPR025857 MacB-like periplasmic core domain XFC3_09250 018ca9591a13bb76da17bcd3f9a300f3 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 2.9E-141 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 XFC3_05025 d73f7644c47679d1599b1eeaad8d70ed 176 Gene3D G3DSA:2.30.30.40 45 155 1.6E-15 T 11-10-2018 XFC3_05025 d73f7644c47679d1599b1eeaad8d70ed 176 SMART SM00260 29 166 5.7E-5 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XFC3_05025 d73f7644c47679d1599b1eeaad8d70ed 176 SUPERFAMILY SSF50341 26 170 8.72E-27 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 XFC3_05025 d73f7644c47679d1599b1eeaad8d70ed 176 Pfam PF01584 CheW-like domain 35 166 5.8E-24 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XFC3_05025 d73f7644c47679d1599b1eeaad8d70ed 176 Gene3D G3DSA:2.40.50.180 52 118 1.6E-15 T 11-10-2018 XFC3_08820 f24d6a3c56fe80fbb36e00324ce9d6d0 350 Hamap MF_00790 Lipase chaperone [lifO]. 17 350 22.506 T 11-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 XFC3_08820 f24d6a3c56fe80fbb36e00324ce9d6d0 350 SUPERFAMILY SSF158855 76 349 1.83E-74 T 11-10-2018 XFC3_08820 f24d6a3c56fe80fbb36e00324ce9d6d0 350 Pfam PF03280 Proteobacterial lipase chaperone protein 149 340 1.3E-48 T 11-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 XFC3_01320 cace6e0cca97c693bd46ac7f803e9325 118 Gene3D G3DSA:1.20.58.1610 1 118 4.8E-41 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01320 cace6e0cca97c693bd46ac7f803e9325 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 117 1.0E-35 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01320 cace6e0cca97c693bd46ac7f803e9325 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 18.722 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 XFC3_11100 675a2b277be7fc783ea76aceeada87b9 320 Pfam PF07920 Protein of unknown function (DUF1684) 175 311 1.8E-41 T 11-10-2018 IPR012467 Protein of unknown function DUF1684 XFC3_11825 0951b8cff07ca32b9a151f64625611a2 220 SUPERFAMILY SSF46894 143 208 7.48E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XFC3_11825 0951b8cff07ca32b9a151f64625611a2 220 Pfam PF00072 Response regulator receiver domain 5 116 3.8E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_11825 0951b8cff07ca32b9a151f64625611a2 220 Gene3D G3DSA:3.40.50.12740 3 208 1.2E-51 T 11-10-2018 XFC3_11825 0951b8cff07ca32b9a151f64625611a2 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 203 2.7E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFC3_11825 0951b8cff07ca32b9a151f64625611a2 220 SMART SM00421 146 203 1.3E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFC3_11825 0951b8cff07ca32b9a151f64625611a2 220 SUPERFAMILY SSF52172 2 132 1.27E-27 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_11825 0951b8cff07ca32b9a151f64625611a2 220 SMART SM00448 3 116 3.2E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_11825 0951b8cff07ca32b9a151f64625611a2 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.1E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFC3_11825 0951b8cff07ca32b9a151f64625611a2 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.1E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFC3_11825 0951b8cff07ca32b9a151f64625611a2 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.1E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFC3_01815 fda97c3b124c05a17b845ebf656d9631 120 Gene3D G3DSA:3.30.1130.10 1 117 5.7E-38 T 11-10-2018 XFC3_01815 fda97c3b124c05a17b845ebf656d9631 120 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 9.4E-23 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XFC3_01815 fda97c3b124c05a17b845ebf656d9631 120 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 4.9E-31 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XFC3_01815 fda97c3b124c05a17b845ebf656d9631 120 SMART SM00905 4 114 9.8E-44 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XFC3_01815 fda97c3b124c05a17b845ebf656d9631 120 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.3E-27 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XFC3_01815 fda97c3b124c05a17b845ebf656d9631 120 SUPERFAMILY SSF55620 1 116 1.78E-34 T 11-10-2018 XFC3_09215 c758e083ca401dc3f1670c4d00f6f2c1 213 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 161 5.2E-18 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain XFC3_09215 c758e083ca401dc3f1670c4d00f6f2c1 213 PIRSF PIRSF009320 1 210 3.8E-32 T 11-10-2018 XFC3_09215 c758e083ca401dc3f1670c4d00f6f2c1 213 Gene3D G3DSA:3.40.50.300 4 213 1.3E-40 T 11-10-2018 XFC3_09215 c758e083ca401dc3f1670c4d00f6f2c1 213 SUPERFAMILY SSF52540 1 211 3.19E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_10895 d923bb8bde03d10e36180006bd6ee473 304 Gene3D G3DSA:3.30.1700.10 128 303 2.6E-63 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XFC3_10895 d923bb8bde03d10e36180006bd6ee473 304 Gene3D G3DSA:3.30.230.20 1 127 1.7E-47 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XFC3_10895 d923bb8bde03d10e36180006bd6ee473 304 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3 292 1.4E-114 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XFC3_10895 d923bb8bde03d10e36180006bd6ee473 304 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 46.09 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XFC3_10895 d923bb8bde03d10e36180006bd6ee473 304 SUPERFAMILY SSF54211 3 124 6.83E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_10895 d923bb8bde03d10e36180006bd6ee473 304 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 4.4E-103 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XFC3_10895 d923bb8bde03d10e36180006bd6ee473 304 SUPERFAMILY SSF54211 134 277 4.63E-49 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_07400 1e4b96ba2ed1febad9bc361a2914ea7e 844 Pfam PF08706 D5 N terminal like 374 531 6.0E-35 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XFC3_07400 1e4b96ba2ed1febad9bc361a2914ea7e 844 SUPERFAMILY SSF52540 526 690 1.37E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07400 1e4b96ba2ed1febad9bc361a2914ea7e 844 SMART SM00885 373 532 1.4E-49 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XFC3_07400 1e4b96ba2ed1febad9bc361a2914ea7e 844 Pfam PF03288 Poxvirus D5 protein-like 752 819 4.6E-5 T 11-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal XFC3_07400 1e4b96ba2ed1febad9bc361a2914ea7e 844 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 481 803 5.4E-81 T 11-10-2018 IPR006500 DNA primase, phage/plasmid XFC3_10050 1e4b96ba2ed1febad9bc361a2914ea7e 844 Pfam PF08706 D5 N terminal like 374 531 6.0E-35 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XFC3_10050 1e4b96ba2ed1febad9bc361a2914ea7e 844 SUPERFAMILY SSF52540 526 690 1.37E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_10050 1e4b96ba2ed1febad9bc361a2914ea7e 844 SMART SM00885 373 532 1.4E-49 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XFC3_10050 1e4b96ba2ed1febad9bc361a2914ea7e 844 Pfam PF03288 Poxvirus D5 protein-like 752 819 4.6E-5 T 11-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal XFC3_10050 1e4b96ba2ed1febad9bc361a2914ea7e 844 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 481 803 5.4E-81 T 11-10-2018 IPR006500 DNA primase, phage/plasmid XFC3_12530 32c5eb0afea5693cb0eb6c5a766d22eb 126 Gene3D G3DSA:1.10.3510.10 2 124 9.6E-15 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_12530 32c5eb0afea5693cb0eb6c5a766d22eb 126 Pfam PF04591 Protein of unknown function, DUF596 56 124 8.7E-23 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFC3_12530 32c5eb0afea5693cb0eb6c5a766d22eb 126 SUPERFAMILY SSF160472 1 119 7.98E-37 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_07865 604aa89ccfd6bf2567d016ce2cc46324 333 Gene3D G3DSA:3.40.50.10490 12 204 1.5E-60 T 11-10-2018 XFC3_07865 604aa89ccfd6bf2567d016ce2cc46324 333 Pfam PF01380 SIS domain 50 181 1.8E-29 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XFC3_07865 604aa89ccfd6bf2567d016ce2cc46324 333 PIRSF PIRSF004692 4 333 6.4E-135 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 XFC3_07865 604aa89ccfd6bf2567d016ce2cc46324 333 Pfam PF00571 CBS domain 279 330 5.2E-7 T 11-10-2018 IPR000644 CBS domain XFC3_07865 604aa89ccfd6bf2567d016ce2cc46324 333 Pfam PF00571 CBS domain 211 267 7.3E-9 T 11-10-2018 IPR000644 CBS domain XFC3_07865 604aa89ccfd6bf2567d016ce2cc46324 333 SMART SM00116 284 332 4.4E-4 T 11-10-2018 IPR000644 CBS domain XFC3_07865 604aa89ccfd6bf2567d016ce2cc46324 333 SMART SM00116 219 267 5.2E-5 T 11-10-2018 IPR000644 CBS domain XFC3_07865 604aa89ccfd6bf2567d016ce2cc46324 333 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 54 323 5.0E-112 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 XFC3_07865 604aa89ccfd6bf2567d016ce2cc46324 333 SUPERFAMILY SSF53697 20 330 7.56E-69 T 11-10-2018 XFC3_07865 604aa89ccfd6bf2567d016ce2cc46324 333 Gene3D G3DSA:3.10.580.10 205 330 4.3E-46 T 11-10-2018 XFC3_01040 3a4408ae49794ada4ed273b7a3dc0bcd 293 SUPERFAMILY SSF51735 6 256 8.86E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_01040 3a4408ae49794ada4ed273b7a3dc0bcd 293 Gene3D G3DSA:3.40.50.720 9 274 9.4E-81 T 11-10-2018 XFC3_01040 3a4408ae49794ada4ed273b7a3dc0bcd 293 Gene3D G3DSA:3.90.25.10 143 276 9.4E-81 T 11-10-2018 XFC3_01040 3a4408ae49794ada4ed273b7a3dc0bcd 293 Pfam PF05368 NmrA-like family 8 227 1.1E-18 T 11-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 XFC3_05995 028cc092b392227187a400ba5decd473 332 Gene3D G3DSA:3.40.50.720 1 332 7.6E-76 T 11-10-2018 XFC3_05995 028cc092b392227187a400ba5decd473 332 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 4 249 1.1E-49 T 11-10-2018 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 XFC3_05995 028cc092b392227187a400ba5decd473 332 SUPERFAMILY SSF51735 1 326 5.35E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_04245 d85d39d5fbae440f7fc2d268099b8a13 324 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 25 317 5.8E-91 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 XFC3_04245 d85d39d5fbae440f7fc2d268099b8a13 324 SUPERFAMILY SSF161098 31 311 3.83E-34 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_04245 d85d39d5fbae440f7fc2d268099b8a13 324 Gene3D G3DSA:1.10.3720.10 77 322 1.4E-34 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_04245 d85d39d5fbae440f7fc2d268099b8a13 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 311 9.4E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 Gene3D G3DSA:1.25.40.10 5 316 2.2E-48 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 SUPERFAMILY SSF52540 550 672 8.18E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 202 235 15.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 271 304 270.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 134 167 17.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 168 201 0.002 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 237 270 100.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 32 65 89.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 66 99 64.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 100 133 340.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 Gene3D G3DSA:1.25.40.10 319 452 9.2E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 SUPERFAMILY SSF48452 237 434 4.17E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 SUPERFAMILY SSF48452 18 338 2.8E-34 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 Pfam PF13432 Tetratricopeptide repeat 208 271 3.2E-6 T 11-10-2018 XFC3_03980 41a454f5ba3c8a5cfc094221a56cf0fb 690 Pfam PF13432 Tetratricopeptide repeat 141 199 7.6E-7 T 11-10-2018 XFC3_02130 2fcd63ef0c70577ca184e8109332e5b0 172 SUPERFAMILY SSF54637 2 169 4.81E-53 T 11-10-2018 IPR029069 HotDog domain superfamily XFC3_02130 2fcd63ef0c70577ca184e8109332e5b0 172 Pfam PF07977 FabA-like domain 28 158 1.8E-51 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFC3_02130 2fcd63ef0c70577ca184e8109332e5b0 172 Gene3D G3DSA:3.10.129.10 1 172 3.2E-60 T 11-10-2018 XFC3_02130 2fcd63ef0c70577ca184e8109332e5b0 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 172 1.7E-85 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFC3_02130 2fcd63ef0c70577ca184e8109332e5b0 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 172 49.405 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFC3_11510 35b50d251c62ba148e5da02a91007d03 287 Gene3D G3DSA:1.20.120.1220 128 281 1.2E-5 T 11-10-2018 XFC3_11510 35b50d251c62ba148e5da02a91007d03 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 210 221 2.4E-18 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XFC3_11510 35b50d251c62ba148e5da02a91007d03 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 222 237 2.4E-18 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XFC3_11510 35b50d251c62ba148e5da02a91007d03 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 142 159 2.4E-18 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XFC3_11510 35b50d251c62ba148e5da02a91007d03 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 199 209 2.4E-18 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XFC3_11510 35b50d251c62ba148e5da02a91007d03 287 Pfam PF01478 Type IV leader peptidase family 133 241 1.1E-22 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 XFC3_11510 35b50d251c62ba148e5da02a91007d03 287 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 18 123 1.9E-26 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal XFC3_02995 140e854367ed685c374b959793b38b0e 1071 Gene3D G3DSA:1.20.1640.10 888 1044 2.3E-74 T 11-10-2018 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 SUPERFAMILY SSF82693 555 650 2.82E-12 T 11-10-2018 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 Gene3D G3DSA:3.30.70.1430 40 130 8.5E-206 T 11-10-2018 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 SUPERFAMILY SSF82693 136 322 1.2E-22 T 11-10-2018 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 SUPERFAMILY SSF82866 826 1050 2.75E-44 T 11-10-2018 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 Gene3D G3DSA:3.30.2090.10 706 778 8.5E-206 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_02995 140e854367ed685c374b959793b38b0e 1071 SUPERFAMILY SSF82866 288 489 2.88E-48 T 11-10-2018 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 Gene3D G3DSA:3.30.70.1440 654 705 8.5E-206 T 11-10-2018 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 Gene3D G3DSA:1.20.1640.10 505 558 8.5E-206 T 11-10-2018 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 Gene3D G3DSA:1.20.1640.10 10 504 8.5E-206 T 11-10-2018 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 SUPERFAMILY SSF82714 706 776 6.54E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_02995 140e854367ed685c374b959793b38b0e 1071 SUPERFAMILY SSF82693 40 130 3.4E-20 T 11-10-2018 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 Gene3D G3DSA:3.30.70.1440 838 887 2.3E-74 T 11-10-2018 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 Gene3D G3DSA:3.30.2090.10 809 829 2.3E-74 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_02995 140e854367ed685c374b959793b38b0e 1071 Gene3D G3DSA:3.30.70.1320 131 322 8.5E-206 T 11-10-2018 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 Gene3D G3DSA:3.30.2090.10 178 269 8.5E-206 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_02995 140e854367ed685c374b959793b38b0e 1071 SUPERFAMILY SSF82714 181 265 4.58E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFC3_02995 140e854367ed685c374b959793b38b0e 1071 Pfam PF00873 AcrB/AcrD/AcrF family 4 1047 2.8E-300 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 609 623 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFC3_02995 140e854367ed685c374b959793b38b0e 1071 Gene3D G3DSA:3.30.70.1430 559 653 8.5E-206 T 11-10-2018 XFC3_00895 5367a695611c03827544918cf25239da 344 Gene3D G3DSA:1.20.970.10 1 72 5.6E-30 T 11-10-2018 XFC3_00895 5367a695611c03827544918cf25239da 344 SUPERFAMILY SSF47648 3 71 5.1E-17 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XFC3_00895 5367a695611c03827544918cf25239da 344 Gene3D G3DSA:3.40.1030.10 73 341 3.1E-105 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XFC3_00895 5367a695611c03827544918cf25239da 344 SUPERFAMILY SSF52418 78 339 3.66E-94 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XFC3_00895 5367a695611c03827544918cf25239da 344 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 336 1.7E-123 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 XFC3_00895 5367a695611c03827544918cf25239da 344 Pfam PF00591 Glycosyl transferase family, a/b domain 77 327 8.1E-90 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 XFC3_00895 5367a695611c03827544918cf25239da 344 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 68 3.9E-12 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 XFC3_00895 5367a695611c03827544918cf25239da 344 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 36.949 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 XFC3_05885 dc7f2e7fb1121f3c2224716e55ad0c7f 82 Pfam PF13986 Domain of unknown function (DUF4224) 19 63 1.2E-17 T 11-10-2018 IPR025319 Domain of unknown function DUF4224 XFC3_04005 a24cb164e4e3fe11c742cfd7f3aea3c8 239 SUPERFAMILY SSF53098 4 180 1.1E-50 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFC3_04005 a24cb164e4e3fe11c742cfd7f3aea3c8 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 181 6.7E-60 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_04005 a24cb164e4e3fe11c742cfd7f3aea3c8 239 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 6 237 1.9E-100 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_04005 a24cb164e4e3fe11c742cfd7f3aea3c8 239 SMART SM00479 6 179 3.2E-43 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFC3_04005 a24cb164e4e3fe11c742cfd7f3aea3c8 239 Gene3D G3DSA:3.30.420.10 1 183 7.4E-53 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFC3_04005 a24cb164e4e3fe11c742cfd7f3aea3c8 239 Pfam PF00929 Exonuclease 8 170 1.4E-32 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFC3_09195 bf3d8d26d664c4b1c491f770cc92e2e8 161 Gene3D G3DSA:3.40.50.1170 1 159 1.1E-28 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 XFC3_09195 bf3d8d26d664c4b1c491f770cc92e2e8 161 SUPERFAMILY SSF53774 1 152 9.16E-33 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 XFC3_09195 bf3d8d26d664c4b1c491f770cc92e2e8 161 PRINTS PR00139 Asparaginase/glutaminase family signature 75 93 3.0E-5 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XFC3_09195 bf3d8d26d664c4b1c491f770cc92e2e8 161 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 3.0E-5 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XFC3_09195 bf3d8d26d664c4b1c491f770cc92e2e8 161 Pfam PF00710 Asparaginase, N-terminal 4 152 2.7E-23 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 XFC3_00485 a315b949d4f8987fd95640186c326d18 342 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 217 256 1.1E-4 T 11-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 XFC3_00485 a315b949d4f8987fd95640186c326d18 342 SUPERFAMILY SSF51126 36 324 2.84E-27 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor XFC3_00485 a315b949d4f8987fd95640186c326d18 342 SMART SM00710 242 264 780.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat XFC3_00485 a315b949d4f8987fd95640186c326d18 342 SMART SM00710 196 218 50.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat XFC3_00485 a315b949d4f8987fd95640186c326d18 342 SMART SM00710 219 241 710.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat XFC3_00485 a315b949d4f8987fd95640186c326d18 342 SMART SM00710 173 195 180.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat XFC3_00485 a315b949d4f8987fd95640186c326d18 342 Gene3D G3DSA:2.160.20.10 37 328 3.4E-26 T 11-10-2018 IPR012334 Pectin lyase fold XFC3_00485 a315b949d4f8987fd95640186c326d18 342 Pfam PF13229 Right handed beta helix region 144 284 7.5E-17 T 11-10-2018 IPR039448 Right handed beta helix domain XFC3_00485 a315b949d4f8987fd95640186c326d18 342 SMART SM00722 121 293 1.7E-12 T 11-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain XFC3_01545 2d938d102e271a34d29267a1ff4c0784 321 SUPERFAMILY SSF51430 1 319 5.5E-90 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XFC3_01545 2d938d102e271a34d29267a1ff4c0784 321 Gene3D G3DSA:3.20.20.100 1 321 1.1E-107 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XFC3_01545 2d938d102e271a34d29267a1ff4c0784 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 164 183 2.2E-11 T 11-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XFC3_01545 2d938d102e271a34d29267a1ff4c0784 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 274 287 2.2E-11 T 11-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XFC3_01545 2d938d102e271a34d29267a1ff4c0784 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 113 123 2.2E-11 T 11-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XFC3_01545 2d938d102e271a34d29267a1ff4c0784 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 208 214 2.2E-11 T 11-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XFC3_01545 2d938d102e271a34d29267a1ff4c0784 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 236 248 2.2E-11 T 11-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XFC3_01545 2d938d102e271a34d29267a1ff4c0784 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 261 273 2.2E-11 T 11-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XFC3_01545 2d938d102e271a34d29267a1ff4c0784 321 Pfam PF00248 Aldo/keto reductase family 16 307 8.3E-68 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain XFC3_02840 b61956c04adcea69e910a6fe5949e6e3 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 2.8E-27 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_02840 b61956c04adcea69e910a6fe5949e6e3 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.986 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_02840 b61956c04adcea69e910a6fe5949e6e3 89 Gene3D G3DSA:1.20.58.110 1 87 2.4E-27 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_02840 b61956c04adcea69e910a6fe5949e6e3 89 Pfam PF01649 Ribosomal protein S20 2 84 4.5E-26 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_02840 b61956c04adcea69e910a6fe5949e6e3 89 SUPERFAMILY SSF46992 3 86 8.76E-30 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_02840 b61956c04adcea69e910a6fe5949e6e3 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 89 3.0E-37 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_03280 0f302f423751cf7247cc59bd1de0d665 243 SUPERFAMILY SSF53335 9 239 5.07E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_03280 0f302f423751cf7247cc59bd1de0d665 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 179 196 2.8E-28 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_03280 0f302f423751cf7247cc59bd1de0d665 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 197 215 2.8E-28 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_03280 0f302f423751cf7247cc59bd1de0d665 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 220 240 2.8E-28 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_03280 0f302f423751cf7247cc59bd1de0d665 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 27 41 2.8E-28 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_03280 0f302f423751cf7247cc59bd1de0d665 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 84 104 2.8E-28 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_03280 0f302f423751cf7247cc59bd1de0d665 243 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 31 37 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XFC3_03280 0f302f423751cf7247cc59bd1de0d665 243 Pfam PF01555 DNA methylase 176 236 6.0E-17 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XFC3_03280 0f302f423751cf7247cc59bd1de0d665 243 Pfam PF01555 DNA methylase 28 151 2.7E-11 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XFC3_03280 0f302f423751cf7247cc59bd1de0d665 243 Gene3D G3DSA:3.40.50.150 9 240 6.6E-49 T 11-10-2018 XFC3_06030 db78e307f4d82c96f9e3faedbfe8cba4 324 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 1.6E-35 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XFC3_06030 db78e307f4d82c96f9e3faedbfe8cba4 324 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 324 71.89 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XFC3_06030 db78e307f4d82c96f9e3faedbfe8cba4 324 Gene3D G3DSA:3.40.47.10 2 324 1.9E-131 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_06030 db78e307f4d82c96f9e3faedbfe8cba4 324 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 323 1.7E-136 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XFC3_06030 db78e307f4d82c96f9e3faedbfe8cba4 324 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 187 3.7E-34 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XFC3_06030 db78e307f4d82c96f9e3faedbfe8cba4 324 SUPERFAMILY SSF53901 7 324 3.61E-70 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_10595 cebccaa6a5934bdf44d1677e56f0cd03 792 SUPERFAMILY SSF53955 149 350 1.32E-54 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_10595 cebccaa6a5934bdf44d1677e56f0cd03 792 Gene3D G3DSA:3.40.710.10 49 709 2.0E-215 T 11-10-2018 XFC3_10595 cebccaa6a5934bdf44d1677e56f0cd03 792 Gene3D G3DSA:1.10.3810.10 147 353 2.0E-215 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_10595 cebccaa6a5934bdf44d1677e56f0cd03 792 Pfam PF14814 Bifunctional transglycosylase second domain 59 143 1.2E-19 T 11-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_10595 cebccaa6a5934bdf44d1677e56f0cd03 792 SUPERFAMILY SSF56601 311 753 1.34E-96 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFC3_10595 cebccaa6a5934bdf44d1677e56f0cd03 792 Pfam PF00905 Penicillin binding protein transpeptidase domain 427 676 5.5E-15 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XFC3_10595 cebccaa6a5934bdf44d1677e56f0cd03 792 Pfam PF00912 Transglycosylase 150 329 9.8E-51 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_10595 cebccaa6a5934bdf44d1677e56f0cd03 792 Gene3D G3DSA:3.30.2060.10 57 146 2.0E-215 T 11-10-2018 XFC3_10595 cebccaa6a5934bdf44d1677e56f0cd03 792 PIRSF PIRSF002799 4 770 3.2E-263 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_10595 cebccaa6a5934bdf44d1677e56f0cd03 792 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 14 748 0.0 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_00905 cd14135b7fec982aa97de47db88281a3 240 Pfam PF12710 haloacid dehalogenase-like hydrolase 15 198 7.5E-24 T 11-10-2018 XFC3_00905 cd14135b7fec982aa97de47db88281a3 240 Gene3D G3DSA:3.40.50.1000 15 215 3.1E-23 T 11-10-2018 IPR023214 HAD superfamily XFC3_00905 cd14135b7fec982aa97de47db88281a3 240 SUPERFAMILY SSF56784 14 217 1.38E-18 T 11-10-2018 IPR036412 HAD-like superfamily XFC3_00905 cd14135b7fec982aa97de47db88281a3 240 Gene3D G3DSA:1.20.1440.100 26 103 3.1E-23 T 11-10-2018 XFC3_02355 faabfc39d2030cd79ad5a1ac8d1187dd 158 PIRSF PIRSF028570 1 158 6.7E-70 T 11-10-2018 IPR016891 Protein of unknown function DUF2321 XFC3_02355 faabfc39d2030cd79ad5a1ac8d1187dd 158 Pfam PF10083 Uncharacterized protein conserved in bacteria (DUF2321) 3 158 3.6E-65 T 11-10-2018 IPR016891 Protein of unknown function DUF2321 XFC3_07705 da0939b615a6a681c170a0b66012bca5 214 SUPERFAMILY SSF89392 31 212 8.63E-39 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX XFC3_07705 da0939b615a6a681c170a0b66012bca5 214 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 14 213 29.396 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 XFC3_07705 da0939b615a6a681c170a0b66012bca5 214 Gene3D G3DSA:2.50.20.10 29 214 3.3E-40 T 11-10-2018 XFC3_07705 da0939b615a6a681c170a0b66012bca5 214 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 203 2.9E-47 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like XFC3_08440 1fa68ac1f169e18795214d3caaef53bd 439 Pfam PF04286 Protein of unknown function (DUF445) 55 429 1.3E-103 T 11-10-2018 IPR007383 Protein of unknown function DUF445 XFC3_09610 678377cdee441a5b5b659d3ec9281dc9 603 Gene3D G3DSA:3.60.20.40 378 571 3.1E-56 T 11-10-2018 XFC3_09610 678377cdee441a5b5b659d3ec9281dc9 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 402 420 8.6E-66 T 11-10-2018 XFC3_09610 678377cdee441a5b5b659d3ec9281dc9 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 135 153 8.6E-66 T 11-10-2018 XFC3_09610 678377cdee441a5b5b659d3ec9281dc9 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 281 300 8.6E-66 T 11-10-2018 XFC3_09610 678377cdee441a5b5b659d3ec9281dc9 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 61 86 8.6E-66 T 11-10-2018 XFC3_09610 678377cdee441a5b5b659d3ec9281dc9 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 443 458 8.6E-66 T 11-10-2018 XFC3_09610 678377cdee441a5b5b659d3ec9281dc9 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 251 267 8.6E-66 T 11-10-2018 XFC3_09610 678377cdee441a5b5b659d3ec9281dc9 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 378 396 8.6E-66 T 11-10-2018 XFC3_09610 678377cdee441a5b5b659d3ec9281dc9 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 466 483 8.6E-66 T 11-10-2018 XFC3_09610 678377cdee441a5b5b659d3ec9281dc9 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 153 172 8.6E-66 T 11-10-2018 XFC3_09610 678377cdee441a5b5b659d3ec9281dc9 603 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 40 569 6.5E-138 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 XFC3_09610 678377cdee441a5b5b659d3ec9281dc9 603 Pfam PF01019 Gamma-glutamyltranspeptidase 54 570 2.8E-169 T 11-10-2018 XFC3_09610 678377cdee441a5b5b659d3ec9281dc9 603 Gene3D G3DSA:1.10.246.130 267 376 1.8E-34 T 11-10-2018 XFC3_09610 678377cdee441a5b5b659d3ec9281dc9 603 SUPERFAMILY SSF56235 37 570 2.89E-168 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFC3_07925 d2def24976abf4a2963e39da7de61cef 277 Pfam PF00571 CBS domain 108 165 0.0044 T 11-10-2018 IPR000644 CBS domain XFC3_07925 d2def24976abf4a2963e39da7de61cef 277 Pfam PF00571 CBS domain 183 226 0.0044 T 11-10-2018 IPR000644 CBS domain XFC3_07925 d2def24976abf4a2963e39da7de61cef 277 Pfam PF03448 MgtE intracellular N domain 6 106 4.8E-24 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain XFC3_07925 d2def24976abf4a2963e39da7de61cef 277 Gene3D G3DSA:1.25.60.10 1 103 1.2E-12 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily XFC3_07925 d2def24976abf4a2963e39da7de61cef 277 SUPERFAMILY SSF158791 2 105 8.89E-23 T 11-10-2018 XFC3_07925 d2def24976abf4a2963e39da7de61cef 277 SMART SM00924 5 108 1.3E-33 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain XFC3_07925 d2def24976abf4a2963e39da7de61cef 277 SUPERFAMILY SSF54631 107 245 1.77E-23 T 11-10-2018 XFC3_07925 d2def24976abf4a2963e39da7de61cef 277 Gene3D G3DSA:3.10.580.10 104 231 2.3E-34 T 11-10-2018 XFC3_09790 995cb6f376afb9c40fe4097bd253b500 845 Pfam PF03288 Poxvirus D5 protein-like 752 817 6.0E-5 T 11-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal XFC3_09790 995cb6f376afb9c40fe4097bd253b500 845 Pfam PF08706 D5 N terminal like 382 530 4.7E-32 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XFC3_09790 995cb6f376afb9c40fe4097bd253b500 845 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 480 803 3.2E-79 T 11-10-2018 IPR006500 DNA primase, phage/plasmid XFC3_09790 995cb6f376afb9c40fe4097bd253b500 845 SMART SM00885 381 531 5.4E-38 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XFC3_09790 995cb6f376afb9c40fe4097bd253b500 845 SUPERFAMILY SSF52540 551 691 2.3E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01060 9e353bfd64f03ec4881e78f05d972f32 360 Gene3D G3DSA:2.40.30.170 36 271 2.4E-56 T 11-10-2018 XFC3_01060 9e353bfd64f03ec4881e78f05d972f32 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 27 346 5.0E-87 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XFC3_01060 9e353bfd64f03ec4881e78f05d972f32 360 SUPERFAMILY SSF111369 40 169 1.12E-9 T 11-10-2018 XFC3_01060 9e353bfd64f03ec4881e78f05d972f32 360 Gene3D G3DSA:2.40.420.20 30 345 2.4E-56 T 11-10-2018 XFC3_01060 9e353bfd64f03ec4881e78f05d972f32 360 Gene3D G3DSA:2.40.50.100 50 196 2.4E-56 T 11-10-2018 XFC3_01060 9e353bfd64f03ec4881e78f05d972f32 360 Gene3D G3DSA:1.10.287.470 84 157 2.4E-56 T 11-10-2018 XFC3_01060 9e353bfd64f03ec4881e78f05d972f32 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 240 2.4E-7 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XFC3_01110 34802a445f7869e47b4d6c83de770009 302 Gene3D G3DSA:3.90.25.10 167 291 3.9E-103 T 11-10-2018 XFC3_01110 34802a445f7869e47b4d6c83de770009 302 Pfam PF04321 RmlD substrate binding domain 2 297 1.5E-107 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 XFC3_01110 34802a445f7869e47b4d6c83de770009 302 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 296 1.1E-117 T 11-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 XFC3_01110 34802a445f7869e47b4d6c83de770009 302 SUPERFAMILY SSF51735 2 298 2.19E-92 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_01110 34802a445f7869e47b4d6c83de770009 302 Gene3D G3DSA:3.40.50.720 3 284 3.9E-103 T 11-10-2018 XFC3_06225 b6cd84354e9dcd392d9848b3b2d38eec 249 Pfam PF08900 Domain of unknown function (DUF1845) 12 211 2.5E-67 T 11-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 XFC3_06225 b6cd84354e9dcd392d9848b3b2d38eec 249 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 13 214 5.1E-77 T 11-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 XFC3_03865 60ddc71710e5702a6aec35c8a39fa828 130 Gene3D G3DSA:1.10.3510.10 4 129 2.0E-14 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_03865 60ddc71710e5702a6aec35c8a39fa828 130 SUPERFAMILY SSF160472 2 123 2.62E-34 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_03865 60ddc71710e5702a6aec35c8a39fa828 130 Pfam PF04591 Protein of unknown function, DUF596 57 129 3.0E-22 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFC3_11740 4ff2057c95087014717f759fe44f29cd 508 PIRSF PIRSF001267 7 508 9.3E-186 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 XFC3_11740 4ff2057c95087014717f759fe44f29cd 508 Gene3D G3DSA:1.10.3210.10 317 507 1.0E-49 T 11-10-2018 XFC3_11740 4ff2057c95087014717f759fe44f29cd 508 Gene3D G3DSA:3.30.420.150 121 301 1.2E-83 T 11-10-2018 XFC3_11740 4ff2057c95087014717f759fe44f29cd 508 Gene3D G3DSA:3.30.420.40 18 309 1.2E-83 T 11-10-2018 XFC3_11740 4ff2057c95087014717f759fe44f29cd 508 Pfam PF02541 Ppx/GppA phosphatase family 31 314 1.5E-64 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 XFC3_11740 4ff2057c95087014717f759fe44f29cd 508 SUPERFAMILY SSF53067 142 314 2.04E-44 T 11-10-2018 XFC3_11740 4ff2057c95087014717f759fe44f29cd 508 SUPERFAMILY SSF53067 17 137 1.29E-31 T 11-10-2018 XFC3_11740 4ff2057c95087014717f759fe44f29cd 508 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 17 312 4.5E-97 T 11-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 XFC3_11740 4ff2057c95087014717f759fe44f29cd 508 SUPERFAMILY SSF109604 319 498 4.54E-45 T 11-10-2018 XFC3_02450 40d47f4eb913073f36afcb5b79ad110b 159 Gene3D G3DSA:2.40.10.330 71 120 1.2E-49 T 11-10-2018 XFC3_02450 40d47f4eb913073f36afcb5b79ad110b 159 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 135 1.2E-9 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XFC3_02450 40d47f4eb913073f36afcb5b79ad110b 159 Gene3D G3DSA:3.10.50.40 3 153 1.2E-49 T 11-10-2018 XFC3_02450 40d47f4eb913073f36afcb5b79ad110b 159 SUPERFAMILY SSF54534 2 139 1.36E-33 T 11-10-2018 XFC3_11895 febf756401d260e3bd1d9fd4fe11d03e 124 Gene3D G3DSA:2.40.50.140 1 124 4.6E-61 T 11-10-2018 XFC3_11895 febf756401d260e3bd1d9fd4fe11d03e 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 6.5E-68 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11895 febf756401d260e3bd1d9fd4fe11d03e 124 SUPERFAMILY SSF50249 3 123 1.71E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_11895 febf756401d260e3bd1d9fd4fe11d03e 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.451 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11895 febf756401d260e3bd1d9fd4fe11d03e 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11895 febf756401d260e3bd1d9fd4fe11d03e 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.2E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11895 febf756401d260e3bd1d9fd4fe11d03e 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.2E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11895 febf756401d260e3bd1d9fd4fe11d03e 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.2E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11895 febf756401d260e3bd1d9fd4fe11d03e 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.2E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11895 febf756401d260e3bd1d9fd4fe11d03e 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.2E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11895 febf756401d260e3bd1d9fd4fe11d03e 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.2E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11895 febf756401d260e3bd1d9fd4fe11d03e 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 3.4E-40 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11895 febf756401d260e3bd1d9fd4fe11d03e 124 PIRSF PIRSF002133 1 124 1.1E-53 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_09550 8773e8e79a8326282419a18fb780ed4c 401 SUPERFAMILY SSF52402 3 185 7.72E-34 T 11-10-2018 XFC3_09550 8773e8e79a8326282419a18fb780ed4c 401 Pfam PF00764 Arginosuccinate synthase 7 392 1.2E-84 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFC3_09550 8773e8e79a8326282419a18fb780ed4c 401 SUPERFAMILY SSF69864 174 398 1.15E-58 T 11-10-2018 XFC3_09550 8773e8e79a8326282419a18fb780ed4c 401 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFC3_09550 8773e8e79a8326282419a18fb780ed4c 401 Gene3D G3DSA:3.90.1260.10 65 352 4.5E-103 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFC3_09550 8773e8e79a8326282419a18fb780ed4c 401 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFC3_09550 8773e8e79a8326282419a18fb780ed4c 401 Gene3D G3DSA:3.40.50.620 6 174 4.5E-103 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_09550 8773e8e79a8326282419a18fb780ed4c 401 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 397 38.335 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFC3_09550 8773e8e79a8326282419a18fb780ed4c 401 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 395 2.7E-83 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFC3_02045 e09db27f39585faa6779506c12683d03 273 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 271 1.5E-85 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 XFC3_02045 e09db27f39585faa6779506c12683d03 273 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 227 37.899 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 XFC3_02045 e09db27f39585faa6779506c12683d03 273 SUPERFAMILY SSF53790 5 225 1.7E-79 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 XFC3_02045 e09db27f39585faa6779506c12683d03 273 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 XFC3_02045 e09db27f39585faa6779506c12683d03 273 PIRSF PIRSF005917 1 273 3.1E-100 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 XFC3_02045 e09db27f39585faa6779506c12683d03 273 Gene3D G3DSA:3.30.950.10 114 234 5.3E-43 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 XFC3_02045 e09db27f39585faa6779506c12683d03 273 Gene3D G3DSA:3.40.1010.10 1 113 3.4E-41 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 XFC3_02045 e09db27f39585faa6779506c12683d03 273 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 206 1.1E-27 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 XFC3_11150 b978021c59b30502722a1a20f94dc9b6 134 SUPERFAMILY SSF81273 82 113 5.89E-6 T 11-10-2018 XFC3_11150 b978021c59b30502722a1a20f94dc9b6 134 Gene3D G3DSA:3.30.160.510 62 125 2.1E-31 T 11-10-2018 XFC3_11150 b978021c59b30502722a1a20f94dc9b6 134 Pfam PF00816 H-NS histone family 18 112 4.5E-17 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 XFC3_11150 b978021c59b30502722a1a20f94dc9b6 134 SMART SM00528 79 122 1.5E-4 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 XFC3_00330 445c7a547d9359ff23e5435063847659 901 Pfam PF13953 PapC C-terminal domain 819 882 3.2E-21 T 11-10-2018 IPR025949 PapC-like, C-terminal domain XFC3_00330 445c7a547d9359ff23e5435063847659 901 Gene3D G3DSA:2.60.40.2070 815 901 8.4E-19 T 11-10-2018 XFC3_00330 445c7a547d9359ff23e5435063847659 901 Gene3D G3DSA:3.10.20.410 99 221 1.7E-34 T 11-10-2018 XFC3_00330 445c7a547d9359ff23e5435063847659 901 Gene3D G3DSA:2.60.40.3110 333 422 2.3E-39 T 11-10-2018 XFC3_00330 445c7a547d9359ff23e5435063847659 901 Gene3D G3DSA:2.60.40.2610 724 814 9.2E-29 T 11-10-2018 XFC3_00330 445c7a547d9359ff23e5435063847659 901 Pfam PF00577 Outer membrane usher protein 263 809 1.4E-169 T 11-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 XFC3_00330 445c7a547d9359ff23e5435063847659 901 SUPERFAMILY SSF141729 122 235 3.53E-34 T 11-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 XFC3_00330 445c7a547d9359ff23e5435063847659 901 Pfam PF13954 PapC N-terminal domain 101 243 3.5E-47 T 11-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 XFC3_00330 445c7a547d9359ff23e5435063847659 901 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 375 385 - T 11-10-2018 IPR018030 Fimbrial membrane usher, conserved site XFC3_01595 e8bfcbddea312a2c8a0d71b695f2c17e 204 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 5 203 23.742 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XFC3_01595 e8bfcbddea312a2c8a0d71b695f2c17e 204 SUPERFAMILY SSF51391 4 201 5.75E-54 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XFC3_01595 e8bfcbddea312a2c8a0d71b695f2c17e 204 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 7 196 2.0E-58 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XFC3_01595 e8bfcbddea312a2c8a0d71b695f2c17e 204 Pfam PF02581 Thiamine monophosphate synthase 7 185 7.5E-50 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XFC3_01595 e8bfcbddea312a2c8a0d71b695f2c17e 204 Gene3D G3DSA:3.20.20.70 1 203 1.9E-52 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_10630 5409c04ade42e42a9e5d08d0e4b0f239 335 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_10630 5409c04ade42e42a9e5d08d0e4b0f239 335 Gene3D G3DSA:3.40.50.300 1 242 3.0E-75 T 11-10-2018 XFC3_10630 5409c04ade42e42a9e5d08d0e4b0f239 335 SMART SM00382 30 217 1.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_10630 5409c04ade42e42a9e5d08d0e4b0f239 335 Pfam PF00005 ABC transporter 21 169 1.1E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_10630 5409c04ade42e42a9e5d08d0e4b0f239 335 SUPERFAMILY SSF55021 260 333 6.3E-15 T 11-10-2018 XFC3_10630 5409c04ade42e42a9e5d08d0e4b0f239 335 SMART SM00930 260 333 5.9E-24 T 11-10-2018 IPR018449 NIL domain XFC3_10630 5409c04ade42e42a9e5d08d0e4b0f239 335 SUPERFAMILY SSF52540 1 240 8.52E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_10630 5409c04ade42e42a9e5d08d0e4b0f239 335 Pfam PF09383 NIL domain 262 331 7.2E-17 T 11-10-2018 IPR018449 NIL domain XFC3_10630 5409c04ade42e42a9e5d08d0e4b0f239 335 Gene3D G3DSA:3.30.70.260 243 334 9.6E-15 T 11-10-2018 XFC3_00685 6a02d6c24f4df195edd0f2f711ad7a16 382 Gene3D G3DSA:3.30.420.40 21 377 1.0E-125 T 11-10-2018 XFC3_00685 6a02d6c24f4df195edd0f2f711ad7a16 382 SUPERFAMILY SSF53067 15 356 1.48E-24 T 11-10-2018 XFC3_00685 6a02d6c24f4df195edd0f2f711ad7a16 382 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 14 382 41.458 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 XFC3_00685 6a02d6c24f4df195edd0f2f711ad7a16 382 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 15 382 2.5E-168 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 XFC3_00685 6a02d6c24f4df195edd0f2f711ad7a16 382 Gene3D G3DSA:3.30.420.40 159 342 1.0E-125 T 11-10-2018 XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 SUPERFAMILY SSF52279 369 758 4.84E-52 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 369 755 9.5E-61 T 11-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 SMART SM00758 452 606 1.2E-36 T 11-10-2018 IPR011658 PA14 domain XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 PRINTS PR00133 Glycosyl hydrolase family 3 signature 180 196 2.2E-11 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 PRINTS PR00133 Glycosyl hydrolase family 3 signature 84 103 2.2E-11 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 PRINTS PR00133 Glycosyl hydrolase family 3 signature 251 269 2.2E-11 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 Pfam PF07691 PA14 domain 452 605 3.8E-45 T 11-10-2018 IPR011658 PA14 domain XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 SUPERFAMILY SSF56988 455 633 3.79E-24 T 11-10-2018 XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 SUPERFAMILY SSF51445 27 368 2.32E-95 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 45 326 4.9E-49 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 Gene3D G3DSA:2.60.40.10 758 865 2.0E-28 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 SMART SM01217 792 860 3.2E-22 T 11-10-2018 IPR026891 Fibronectin type III-like domain XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 Gene3D G3DSA:3.40.50.1700 537 757 1.4E-57 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 Gene3D G3DSA:3.40.50.1700 354 452 5.9E-17 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 Pfam PF14310 Fibronectin type III-like domain 792 858 4.1E-18 T 11-10-2018 IPR026891 Fibronectin type III-like domain XFC3_10745 7d1daa2f65cac57bcc32f8f94191d9f5 882 Gene3D G3DSA:3.20.20.300 29 346 5.1E-96 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 XFC3_04780 d82f5a72213655db108aad67f7944211 196 PIRSF PIRSF006806 1 186 9.0E-31 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase XFC3_04780 d82f5a72213655db108aad67f7944211 196 SUPERFAMILY SSF100950 4 187 6.42E-50 T 11-10-2018 IPR037171 NagB/RpiA transferase-like XFC3_04780 d82f5a72213655db108aad67f7944211 196 Gene3D G3DSA:3.40.50.10420 4 190 1.7E-45 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily XFC3_04780 d82f5a72213655db108aad67f7944211 196 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 184 7.0E-33 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase XFC3_04780 d82f5a72213655db108aad67f7944211 196 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 184 2.5E-47 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase XFC3_08245 ee65f3ba2c9860fd2196e40280a5bf70 238 Gene3D G3DSA:3.30.750.120 8 122 4.5E-9 T 11-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily XFC3_08245 ee65f3ba2c9860fd2196e40280a5bf70 238 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 8 111 2.6E-26 T 11-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 XFC3_08245 ee65f3ba2c9860fd2196e40280a5bf70 238 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 12 237 1.7E-86 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 XFC3_08245 ee65f3ba2c9860fd2196e40280a5bf70 238 SUPERFAMILY SSF63848 134 237 1.03E-29 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 XFC3_08245 ee65f3ba2c9860fd2196e40280a5bf70 238 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 11 238 26.315 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 XFC3_08245 ee65f3ba2c9860fd2196e40280a5bf70 238 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 136 234 7.3E-31 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 XFC3_08245 ee65f3ba2c9860fd2196e40280a5bf70 238 Gene3D G3DSA:2.160.20.70 130 238 3.9E-30 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 XFC3_04945 c50497983a176b634435858ed209b753 527 SUPERFAMILY SSF53927 220 527 3.51E-126 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XFC3_04945 c50497983a176b634435858ed209b753 527 SMART SM00798 138 459 1.3E-194 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFC3_04945 c50497983a176b634435858ed209b753 527 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 527 43.978 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFC3_04945 c50497983a176b634435858ed209b753 527 Gene3D G3DSA:3.40.140.20 392 527 5.2E-59 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFC3_04945 c50497983a176b634435858ed209b753 527 SMART SM00851 20 133 4.4E-50 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain XFC3_04945 c50497983a176b634435858ed209b753 527 Gene3D G3DSA:3.40.140.20 218 373 2.2E-56 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFC3_04945 c50497983a176b634435858ed209b753 527 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 458 1.2E-114 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFC3_04945 c50497983a176b634435858ed209b753 527 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 10 527 7.4E-219 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFC3_04945 c50497983a176b634435858ed209b753 527 Pfam PF02142 MGS-like domain 20 132 4.0E-24 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain XFC3_04945 c50497983a176b634435858ed209b753 527 SUPERFAMILY SSF52335 8 198 6.15E-65 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XFC3_04945 c50497983a176b634435858ed209b753 527 Gene3D G3DSA:3.40.50.1380 2 202 4.2E-79 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XFC3_04945 c50497983a176b634435858ed209b753 527 PIRSF PIRSF000414 3 527 9.1E-213 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFC3_07715 38008665ad69d0bbcf73579af7cf9e3f 784 Gene3D G3DSA:3.40.50.300 391 693 2.4E-114 T 11-10-2018 XFC3_07715 38008665ad69d0bbcf73579af7cf9e3f 784 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 33 204 7.1E-41 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region XFC3_07715 38008665ad69d0bbcf73579af7cf9e3f 784 SMART SM00382 429 628 0.0016 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_07715 38008665ad69d0bbcf73579af7cf9e3f 784 Gene3D G3DSA:1.10.10.10 722 784 1.2E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_07715 38008665ad69d0bbcf73579af7cf9e3f 784 Pfam PF09397 Ftsk gamma domain 720 780 2.9E-27 T 11-10-2018 IPR018541 FtsK gamma domain XFC3_07715 38008665ad69d0bbcf73579af7cf9e3f 784 SUPERFAMILY SSF52540 366 679 2.32E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07715 38008665ad69d0bbcf73579af7cf9e3f 784 Pfam PF01580 FtsK/SpoIIIE family 394 607 8.7E-63 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 XFC3_07715 38008665ad69d0bbcf73579af7cf9e3f 784 Gene3D G3DSA:3.30.980.40 286 390 1.6E-32 T 11-10-2018 XFC3_07715 38008665ad69d0bbcf73579af7cf9e3f 784 SUPERFAMILY SSF46785 718 782 3.33E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_07715 38008665ad69d0bbcf73579af7cf9e3f 784 SMART SM00843 718 783 3.3E-40 T 11-10-2018 IPR018541 FtsK gamma domain XFC3_06190 4903c2cf94326dafeb369df850946a6e 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 12 62 3.5E-25 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA XFC3_11075 7c24c8abb0446693974c84607e26b847 114 Gene3D G3DSA:1.10.10.10 13 114 2.2E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_11075 7c24c8abb0446693974c84607e26b847 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 44 3.7E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFC3_11075 7c24c8abb0446693974c84607e26b847 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 3.7E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFC3_11075 7c24c8abb0446693974c84607e26b847 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 3.7E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFC3_11075 7c24c8abb0446693974c84607e26b847 114 SMART SM00418 27 105 6.4E-23 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFC3_11075 7c24c8abb0446693974c84607e26b847 114 SUPERFAMILY SSF46785 13 109 2.95E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_11075 7c24c8abb0446693974c84607e26b847 114 Pfam PF12840 Helix-turn-helix domain 27 82 2.8E-11 T 11-10-2018 XFC3_00805 76dd47103ed4eed702d89e85de291a33 182 Pfam PF00293 NUDIX domain 46 161 4.1E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XFC3_00805 76dd47103ed4eed702d89e85de291a33 182 SUPERFAMILY SSF55811 19 178 6.5E-35 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XFC3_00805 76dd47103ed4eed702d89e85de291a33 182 ProSitePatterns PS00893 Nudix box signature. 78 99 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XFC3_00805 76dd47103ed4eed702d89e85de291a33 182 Gene3D G3DSA:3.90.79.10 14 182 4.2E-42 T 11-10-2018 XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 SUPERFAMILY SSF50249 1 112 2.36E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 Gene3D G3DSA:3.30.1360.30 275 420 6.2E-187 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 SUPERFAMILY SSF55261 293 420 6.76E-37 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 585 32.661 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 6.3E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 6.3E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 6.3E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 6.3E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 SUPERFAMILY SSF55681 115 582 3.38E-104 T 11-10-2018 XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 7.5E-107 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 Pfam PF02938 GAD domain 311 405 3.7E-23 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 Gene3D G3DSA:3.30.930.10 120 582 6.2E-187 T 11-10-2018 XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 Gene3D G3DSA:2.40.50.140 1 114 2.5E-29 T 11-10-2018 XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 Pfam PF01336 OB-fold nucleic acid binding domain 18 105 2.9E-13 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XFC3_05515 4c82ed0bde524b21190ea9fa907f5ff6 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 2.3E-225 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 XFC3_01570 00c99d10fd378ed9245e2bf5de9d365e 176 Pfam PF04351 Pilus assembly protein, PilP 34 173 4.2E-47 T 11-10-2018 IPR007446 Pilus assembly protein PilP XFC3_01570 00c99d10fd378ed9245e2bf5de9d365e 176 Gene3D G3DSA:2.30.30.830 82 174 1.0E-30 T 11-10-2018 XFC3_01570 00c99d10fd378ed9245e2bf5de9d365e 176 PIRSF PIRSF016481 3 176 6.8E-74 T 11-10-2018 IPR007446 Pilus assembly protein PilP XFC3_12145 0957b5e887216dac64140493e8cdfb84 312 PIRSF PIRSF003097 17 308 2.7E-48 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 XFC3_08355 627c8456b9b14a08ae5d5be9adfaa6a2 213 Gene3D G3DSA:3.40.50.10610 20 210 5.1E-66 T 11-10-2018 XFC3_08355 627c8456b9b14a08ae5d5be9adfaa6a2 213 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 33 192 1.2E-34 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component XFC3_08355 627c8456b9b14a08ae5d5be9adfaa6a2 213 SUPERFAMILY SSF159594 30 200 2.12E-44 T 11-10-2018 XFC3_06065 8c899a7e8d92201cd5db04ff8fbddfe9 173 PIRSF PIRSF004982 1 173 2.5E-44 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 XFC3_06065 8c899a7e8d92201cd5db04ff8fbddfe9 173 Pfam PF03843 Outer membrane lipoprotein Slp family 15 171 9.7E-42 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 XFC3_08210 dbb6ce406078300cb0aef48edd416d77 234 Gene3D G3DSA:2.40.128.110 24 193 2.3E-41 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XFC3_08210 dbb6ce406078300cb0aef48edd416d77 234 SUPERFAMILY SSF101874 24 192 1.7E-44 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XFC3_08210 dbb6ce406078300cb0aef48edd416d77 234 Pfam PF04264 YceI-like domain 26 189 5.6E-34 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XFC3_08210 dbb6ce406078300cb0aef48edd416d77 234 SMART SM00867 25 190 3.2E-49 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XFC3_02280 1cbbb758daf5595f1e3aafd13f22c6a0 314 SUPERFAMILY SSF51735 3 313 4.48E-91 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_02280 1cbbb758daf5595f1e3aafd13f22c6a0 314 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 306 1.6E-53 T 11-10-2018 IPR016040 NAD(P)-binding domain XFC3_02280 1cbbb758daf5595f1e3aafd13f22c6a0 314 Gene3D G3DSA:3.40.50.720 7 297 1.0E-107 T 11-10-2018 XFC3_02280 1cbbb758daf5595f1e3aafd13f22c6a0 314 Gene3D G3DSA:3.90.25.10 187 310 1.0E-107 T 11-10-2018 XFC3_09140 403a751b8b53a20badf9caab155278c2 306 Gene3D G3DSA:3.30.70.2130 150 206 9.7E-6 T 11-10-2018 XFC3_09140 403a751b8b53a20badf9caab155278c2 306 PIRSF PIRSF015283 3 306 1.8E-99 T 11-10-2018 IPR016631 Regulatory, RpfE XFC3_06580 9e0ee48de79eb4cbf6c5960771b810d8 863 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 544 831 9.6E-89 T 11-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal XFC3_06580 9e0ee48de79eb4cbf6c5960771b810d8 863 SUPERFAMILY SSF55729 647 829 3.71E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFC3_06580 9e0ee48de79eb4cbf6c5960771b810d8 863 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 23 304 3.4E-10 T 11-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD XFC3_10990 18fd733dbcee7a9a69a955f40f85ffce 66 Pfam PF02597 ThiS family 3 66 5.4E-16 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 XFC3_10990 18fd733dbcee7a9a69a955f40f85ffce 66 SUPERFAMILY SSF54285 1 66 1.44E-17 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp XFC3_10990 18fd733dbcee7a9a69a955f40f85ffce 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 3.0E-20 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis XFC3_10990 18fd733dbcee7a9a69a955f40f85ffce 66 Gene3D G3DSA:3.10.20.30 1 66 2.2E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily XFC3_04525 4f83cb46929a84965af11157b9d6533d 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 42 7.4E-12 T 11-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 XFC3_04525 4f83cb46929a84965af11157b9d6533d 92 Gene3D G3DSA:1.10.1220.10 10 51 1.3E-7 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XFC3_04525 4f83cb46929a84965af11157b9d6533d 92 SUPERFAMILY SSF47598 4 44 6.89E-12 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XFC3_09055 98c6df7195ebdfde742f0435703fd6e6 485 SUPERFAMILY SSF111283 23 483 1.83E-131 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 XFC3_09055 98c6df7195ebdfde742f0435703fd6e6 485 PIRSF PIRSF004919 19 484 2.5E-137 T 11-10-2018 IPR025502 TldD XFC3_09055 98c6df7195ebdfde742f0435703fd6e6 485 Gene3D G3DSA:3.30.2290.10 15 243 1.2E-23 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal XFC3_09055 98c6df7195ebdfde742f0435703fd6e6 485 Pfam PF01523 Putative modulator of DNA gyrase 40 335 7.9E-74 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 XFC3_02730 406d15d3a0c332f1f8477019cb440555 1053 Gene3D G3DSA:1.50.10.10 618 930 1.5E-18 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 XFC3_02730 406d15d3a0c332f1f8477019cb440555 1053 Pfam PF06202 Amylo-alpha-1,6-glucosidase 601 708 3.7E-6 T 11-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 XFC3_02730 406d15d3a0c332f1f8477019cb440555 1053 Gene3D G3DSA:2.60.120.260 180 305 1.7E-16 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFC3_02730 406d15d3a0c332f1f8477019cb440555 1053 SUPERFAMILY SSF49785 23 174 5.95E-20 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFC3_02730 406d15d3a0c332f1f8477019cb440555 1053 SUPERFAMILY SSF49785 160 303 5.56E-19 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFC3_02730 406d15d3a0c332f1f8477019cb440555 1053 Gene3D G3DSA:2.60.120.430 16 176 2.9E-12 T 11-10-2018 XFC3_02730 406d15d3a0c332f1f8477019cb440555 1053 Pfam PF00754 F5/8 type C domain 199 298 4.9E-15 T 11-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain XFC3_02730 406d15d3a0c332f1f8477019cb440555 1053 SUPERFAMILY SSF48208 562 985 3.78E-40 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 XFC3_11045 03fab75e9269e08b99df4e0dc5a185dc 95 SUPERFAMILY SSF54637 2 90 3.27E-11 T 11-10-2018 IPR029069 HotDog domain superfamily XFC3_11045 03fab75e9269e08b99df4e0dc5a185dc 95 Gene3D G3DSA:3.10.129.10 1 93 6.7E-14 T 11-10-2018 XFC3_04725 1688c813cd5aad6bd240bcf35a755ed0 210 Pfam PF03692 Putative zinc- or iron-chelating domain 73 148 5.4E-10 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein XFC3_11935 d3ad9ed508c8e3a8e8c5792967173c74 135 Gene3D G3DSA:1.20.5.1030 76 132 8.4E-16 T 11-10-2018 IPR038379 SecE superfamily XFC3_11935 d3ad9ed508c8e3a8e8c5792967173c74 135 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 81 109 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFC3_11935 d3ad9ed508c8e3a8e8c5792967173c74 135 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 81 132 4.6E-17 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFC3_11935 d3ad9ed508c8e3a8e8c5792967173c74 135 PRINTS PR01650 Bacterial translocase SecE signature 54 75 2.0E-13 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XFC3_11935 d3ad9ed508c8e3a8e8c5792967173c74 135 PRINTS PR01650 Bacterial translocase SecE signature 75 95 2.0E-13 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XFC3_11935 d3ad9ed508c8e3a8e8c5792967173c74 135 PRINTS PR01650 Bacterial translocase SecE signature 99 119 2.0E-13 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XFC3_11935 d3ad9ed508c8e3a8e8c5792967173c74 135 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 79 133 6.8E-19 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XFC3_11935 d3ad9ed508c8e3a8e8c5792967173c74 135 Hamap MF_00422 Protein translocase subunit SecE [secE]. 76 131 11.866 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFC3_00625 03f63c261a56e5d77887bee0586a34f8 409 SUPERFAMILY SSF52507 10 184 2.88E-55 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 XFC3_00625 03f63c261a56e5d77887bee0586a34f8 409 Gene3D G3DSA:3.40.50.1950 7 190 3.3E-54 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 XFC3_00625 03f63c261a56e5d77887bee0586a34f8 409 Gene3D G3DSA:3.40.50.10300 196 409 3.1E-73 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 XFC3_00625 03f63c261a56e5d77887bee0586a34f8 409 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 10 403 4.7E-133 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 XFC3_00625 03f63c261a56e5d77887bee0586a34f8 409 Pfam PF02441 Flavoprotein 14 185 1.5E-42 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 XFC3_00625 03f63c261a56e5d77887bee0586a34f8 409 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 198 378 9.0E-68 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 XFC3_00625 03f63c261a56e5d77887bee0586a34f8 409 SUPERFAMILY SSF102645 196 408 2.09E-71 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 XFC3_03520 c23daa2e6c2f0cb21bff4a694bb36c99 106 Pfam PF04341 Protein of unknown function, DUF485 15 101 3.8E-27 T 11-10-2018 IPR007436 Protein of unknown function DUF485 XFC3_00900 074e153f670b8089a9c9c7525c73f86e 264 Gene3D G3DSA:3.20.20.70 1 263 1.4E-103 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_00900 074e153f670b8089a9c9c7525c73f86e 264 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 259 5.3E-94 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 XFC3_00900 074e153f670b8089a9c9c7525c73f86e 264 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 XFC3_00900 074e153f670b8089a9c9c7525c73f86e 264 SUPERFAMILY SSF51366 12 262 8.71E-90 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XFC3_00900 074e153f670b8089a9c9c7525c73f86e 264 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 36.075 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 XFC3_05185 33eafb5ae89871cf29418597239a6e00 196 Pfam PF03358 NADPH-dependent FMN reductase 1 147 5.3E-17 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 XFC3_05185 33eafb5ae89871cf29418597239a6e00 196 SUPERFAMILY SSF52218 1 183 4.19E-27 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFC3_05185 33eafb5ae89871cf29418597239a6e00 196 Gene3D G3DSA:3.40.50.360 1 192 5.9E-24 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFC3_02310 1f54d80d57f043f3798bc0c81352bed4 95 SUPERFAMILY SSF50129 1 94 1.53E-30 T 11-10-2018 IPR011032 GroES-like superfamily XFC3_02310 1f54d80d57f043f3798bc0c81352bed4 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 5.2E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XFC3_02310 1f54d80d57f043f3798bc0c81352bed4 95 SMART SM00883 2 94 5.9E-50 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XFC3_02310 1f54d80d57f043f3798bc0c81352bed4 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 XFC3_02310 1f54d80d57f043f3798bc0c81352bed4 95 PRINTS PR00297 10kDa chaperonin signature 81 94 2.0E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XFC3_02310 1f54d80d57f043f3798bc0c81352bed4 95 PRINTS PR00297 10kDa chaperonin signature 3 18 2.0E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XFC3_02310 1f54d80d57f043f3798bc0c81352bed4 95 PRINTS PR00297 10kDa chaperonin signature 60 72 2.0E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XFC3_02310 1f54d80d57f043f3798bc0c81352bed4 95 PRINTS PR00297 10kDa chaperonin signature 25 46 2.0E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XFC3_02310 1f54d80d57f043f3798bc0c81352bed4 95 Gene3D G3DSA:2.30.33.40 1 95 7.4E-37 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 XFC3_02310 1f54d80d57f043f3798bc0c81352bed4 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 24.718 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XFC3_09130 194ac856725518e3d186bf54e8628a7a 302 SUPERFAMILY SSF75620 6 291 3.92E-120 T 11-10-2018 XFC3_09130 194ac856725518e3d186bf54e8628a7a 302 SMART SM00937 13 123 1.5E-54 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 XFC3_09130 194ac856725518e3d186bf54e8628a7a 302 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 293 32.079 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 XFC3_09130 194ac856725518e3d186bf54e8628a7a 302 Pfam PF00472 RF-1 domain 156 265 3.1E-41 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XFC3_09130 194ac856725518e3d186bf54e8628a7a 302 Pfam PF03462 PCRF domain 10 148 8.8E-48 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 XFC3_09130 194ac856725518e3d186bf54e8628a7a 302 Gene3D G3DSA:3.30.70.1660 58 286 1.0E-98 T 11-10-2018 XFC3_09130 194ac856725518e3d186bf54e8628a7a 302 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 173 189 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XFC3_09130 194ac856725518e3d186bf54e8628a7a 302 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 291 1.0E-137 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 XFC3_09130 194ac856725518e3d186bf54e8628a7a 302 Gene3D G3DSA:3.30.160.20 154 249 1.0E-98 T 11-10-2018 XFC3_03190 c3381a3c2340fab4df0546fa834b31ba 301 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 285 7.6E-75 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XFC3_03190 c3381a3c2340fab4df0546fa834b31ba 301 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 283 5.0E-72 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XFC3_03190 c3381a3c2340fab4df0546fa834b31ba 301 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XFC3_03190 c3381a3c2340fab4df0546fa834b31ba 301 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 289 19.423 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XFC3_10685 e58b7beda7c6523c004b01b4925830f8 262 Gene3D G3DSA:3.40.1210.10 1 256 1.7E-93 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XFC3_10685 e58b7beda7c6523c004b01b4925830f8 262 Pfam PF01975 Survival protein SurE 3 188 1.7E-61 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XFC3_10685 e58b7beda7c6523c004b01b4925830f8 262 SUPERFAMILY SSF64167 1 254 1.7E-83 T 11-10-2018 XFC3_10685 e58b7beda7c6523c004b01b4925830f8 262 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 239 5.2E-73 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XFC3_10685 e58b7beda7c6523c004b01b4925830f8 262 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 256 41.451 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XFC3_07700 854593cf0a29516626f5283f9cc45568 455 Gene3D G3DSA:1.20.272.10 246 349 8.7E-40 T 11-10-2018 XFC3_07700 854593cf0a29516626f5283f9cc45568 455 SMART SM00382 56 172 1.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_07700 854593cf0a29516626f5283f9cc45568 455 Pfam PF12002 MgsA AAA+ ATPase C terminal 273 438 4.6E-62 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal XFC3_07700 854593cf0a29516626f5283f9cc45568 455 Gene3D G3DSA:1.10.8.60 172 244 7.9E-18 T 11-10-2018 XFC3_07700 854593cf0a29516626f5283f9cc45568 455 SUPERFAMILY SSF52540 20 235 9.06E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07700 854593cf0a29516626f5283f9cc45568 455 SUPERFAMILY SSF48019 256 438 8.5E-70 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 XFC3_07700 854593cf0a29516626f5283f9cc45568 455 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 25 146 1.0E-13 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 XFC3_07700 854593cf0a29516626f5283f9cc45568 455 Gene3D G3DSA:1.10.3710.10 350 451 1.4E-31 T 11-10-2018 XFC3_07700 854593cf0a29516626f5283f9cc45568 455 Pfam PF16193 AAA C-terminal domain 194 271 2.4E-22 T 11-10-2018 IPR032423 AAA C-terminal domain XFC3_07700 854593cf0a29516626f5283f9cc45568 455 Gene3D G3DSA:3.40.50.300 18 170 1.4E-42 T 11-10-2018 XFC3_11700 97817cede122663c9ab8660c1d63e9b4 192 Gene3D G3DSA:1.10.10.60 127 183 4.1E-20 T 11-10-2018 XFC3_11700 97817cede122663c9ab8660c1d63e9b4 192 SMART SM00448 6 118 2.4E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_11700 97817cede122663c9ab8660c1d63e9b4 192 Pfam PF02954 Bacterial regulatory protein, Fis family 147 180 3.0E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFC3_11700 97817cede122663c9ab8660c1d63e9b4 192 Pfam PF00072 Response regulator receiver domain 10 118 1.5E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_11700 97817cede122663c9ab8660c1d63e9b4 192 Gene3D G3DSA:3.40.50.2300 5 124 3.7E-25 T 11-10-2018 XFC3_11700 97817cede122663c9ab8660c1d63e9b4 192 SUPERFAMILY SSF52172 10 122 2.56E-27 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_11700 97817cede122663c9ab8660c1d63e9b4 192 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 147 164 1.3E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFC3_11700 97817cede122663c9ab8660c1d63e9b4 192 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 164 184 1.3E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFC3_11700 97817cede122663c9ab8660c1d63e9b4 192 SUPERFAMILY SSF46689 135 180 5.82E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFC3_06290 57b97b17edcb58669588831a5ceb5b92 296 SUPERFAMILY SSF46785 5 87 1.21E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_06290 57b97b17edcb58669588831a5ceb5b92 296 Gene3D G3DSA:1.10.10.10 5 91 8.2E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_06290 57b97b17edcb58669588831a5ceb5b92 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_06290 57b97b17edcb58669588831a5ceb5b92 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_06290 57b97b17edcb58669588831a5ceb5b92 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_06290 57b97b17edcb58669588831a5ceb5b92 296 Pfam PF03466 LysR substrate binding domain 90 294 3.3E-34 T 11-10-2018 IPR005119 LysR, substrate-binding XFC3_06290 57b97b17edcb58669588831a5ceb5b92 296 Gene3D G3DSA:3.40.190.10 166 269 4.6E-50 T 11-10-2018 XFC3_06290 57b97b17edcb58669588831a5ceb5b92 296 Gene3D G3DSA:3.40.190.10 94 293 4.6E-50 T 11-10-2018 XFC3_06290 57b97b17edcb58669588831a5ceb5b92 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.0E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_06290 57b97b17edcb58669588831a5ceb5b92 296 SUPERFAMILY SSF53850 91 294 1.72E-37 T 11-10-2018 XFC3_01820 85a1326292dc965396e0334f92bdc51f 444 SUPERFAMILY SSF50182 203 270 1.08E-10 T 11-10-2018 IPR010920 LSM domain superfamily XFC3_01820 85a1326292dc965396e0334f92bdc51f 444 Pfam PF00924 Mechanosensitive ion channel 163 415 4.2E-41 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 XFC3_05985 27a7e84d7f5004c10b13c0e55cfa89e0 390 Gene3D G3DSA:3.40.50.300 25 206 2.9E-14 T 11-10-2018 XFC3_05985 27a7e84d7f5004c10b13c0e55cfa89e0 390 SUPERFAMILY SSF52540 58 200 5.32E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_05985 27a7e84d7f5004c10b13c0e55cfa89e0 390 Pfam PF03969 AFG1-like ATPase 115 385 6.8E-90 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 XFC3_05985 27a7e84d7f5004c10b13c0e55cfa89e0 390 Pfam PF03969 AFG1-like ATPase 4 89 2.2E-18 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 XFC3_05755 b2c73fa263a1f04fa165f72bdaf34641 102 Pfam PF07120 Protein of unknown function (DUF1376) 2 85 1.2E-32 T 11-10-2018 IPR010781 Protein of unknown function DUF1376 XFC3_07905 5d40d1b1f406050912eaa755f8191ee5 290 Gene3D G3DSA:3.40.50.300 1 149 4.7E-8 T 11-10-2018 XFC3_07905 5d40d1b1f406050912eaa755f8191ee5 290 Pfam PF03668 P-loop ATPase protein family 8 290 1.1E-92 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 XFC3_07905 5d40d1b1f406050912eaa755f8191ee5 290 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 6 290 37.629 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 XFC3_07905 5d40d1b1f406050912eaa755f8191ee5 290 PIRSF PIRSF005052 6 290 5.9E-113 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 XFC3_07905 5d40d1b1f406050912eaa755f8191ee5 290 SUPERFAMILY SSF52540 8 158 2.77E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_03095 c7f1a13ef964f2325efee348cabdaec2 165 Pfam PF01928 CYTH domain 2 141 3.9E-16 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 XFC3_03095 c7f1a13ef964f2325efee348cabdaec2 165 PIRSF PIRSF016487 1 165 1.5E-63 T 11-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like XFC3_03095 c7f1a13ef964f2325efee348cabdaec2 165 Gene3D G3DSA:2.40.320.10 1 157 1.3E-41 T 11-10-2018 XFC3_03095 c7f1a13ef964f2325efee348cabdaec2 165 SUPERFAMILY SSF55154 1 154 2.45E-38 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 XFC3_03095 c7f1a13ef964f2325efee348cabdaec2 165 SMART SM01118 2 155 4.0E-21 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 XFC3_12050 96558265c19b5d199698f0ce573bcc4c 222 Pfam PF10053 Uncharacterized conserved protein (DUF2290) 24 220 1.2E-85 T 11-10-2018 IPR018742 Protein of unknown function DUF2290 XFC3_01220 610a569f6c3d272a4687c10fcf4bf421 298 Gene3D G3DSA:3.40.50.720 1 285 1.7E-74 T 11-10-2018 XFC3_01220 610a569f6c3d272a4687c10fcf4bf421 298 Pfam PF08338 Domain of unknown function (DUF1731) 249 294 1.5E-14 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 XFC3_01220 610a569f6c3d272a4687c10fcf4bf421 298 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 4 291 6.5E-98 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 XFC3_01220 610a569f6c3d272a4687c10fcf4bf421 298 SUPERFAMILY SSF51735 1 292 1.93E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_01220 610a569f6c3d272a4687c10fcf4bf421 298 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 221 1.9E-17 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 XFC3_10670 b21d74c2d30eaf809182ce9cb16343b2 405 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XFC3_10670 b21d74c2d30eaf809182ce9cb16343b2 405 PIRSF PIRSF001434 4 392 2.9E-134 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XFC3_10670 b21d74c2d30eaf809182ce9cb16343b2 405 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 14 389 1.3E-173 T 11-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 XFC3_10670 b21d74c2d30eaf809182ce9cb16343b2 405 SUPERFAMILY SSF53383 18 389 1.9E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFC3_10670 b21d74c2d30eaf809182ce9cb16343b2 405 Gene3D G3DSA:3.40.640.10 10 255 3.1E-81 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFC3_10670 b21d74c2d30eaf809182ce9cb16343b2 405 Gene3D G3DSA:3.90.1150.10 256 393 5.5E-52 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFC3_10670 b21d74c2d30eaf809182ce9cb16343b2 405 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 388 9.1E-134 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XFC3_10730 705ccca6a7eb289ffe021b541b182ce1 351 SMART SM00636 23 338 2.0E-28 T 11-10-2018 IPR011583 Chitinase II GO:0008061 XFC3_10730 705ccca6a7eb289ffe021b541b182ce1 351 Pfam PF00704 Glycosyl hydrolases family 18 31 336 1.6E-28 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 XFC3_10730 705ccca6a7eb289ffe021b541b182ce1 351 Gene3D G3DSA:3.10.50.10 244 309 2.4E-77 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily XFC3_10730 705ccca6a7eb289ffe021b541b182ce1 351 Gene3D G3DSA:3.20.20.80 45 343 2.4E-77 T 11-10-2018 XFC3_10730 705ccca6a7eb289ffe021b541b182ce1 351 SUPERFAMILY SSF51445 42 343 9.14E-42 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFC3_08405 b31bb65d4a58a3c69119d496eb4b4715 554 Pfam PF06418 CTP synthase N-terminus 5 265 2.2E-121 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 XFC3_08405 b31bb65d4a58a3c69119d496eb4b4715 554 Pfam PF00117 Glutamine amidotransferase class-I 303 538 7.3E-53 T 11-10-2018 IPR017926 Glutamine amidotransferase XFC3_08405 b31bb65d4a58a3c69119d496eb4b4715 554 Hamap MF_01227 CTP synthase [pyrG]. 2 543 51.252 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 XFC3_08405 b31bb65d4a58a3c69119d496eb4b4715 554 Gene3D G3DSA:3.40.50.880 288 546 4.5E-96 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_08405 b31bb65d4a58a3c69119d496eb4b4715 554 SUPERFAMILY SSF52317 290 543 1.36E-79 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_08405 b31bb65d4a58a3c69119d496eb4b4715 554 Gene3D G3DSA:3.40.50.300 1 285 1.2E-123 T 11-10-2018 XFC3_08405 b31bb65d4a58a3c69119d496eb4b4715 554 TIGRFAM TIGR00337 PyrG: CTP synthase 4 538 5.3E-238 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 XFC3_08405 b31bb65d4a58a3c69119d496eb4b4715 554 SUPERFAMILY SSF52540 2 266 3.8E-118 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_03635 9f2b07a484326c0a08223e040c541ccb 155 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 14 145 1.0E-27 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 XFC3_03635 9f2b07a484326c0a08223e040c541ccb 155 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 11 149 20.521 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 XFC3_03635 9f2b07a484326c0a08223e040c541ccb 155 Pfam PF03652 Holliday junction resolvase 12 146 2.7E-34 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 XFC3_03635 9f2b07a484326c0a08223e040c541ccb 155 SMART SM00732 11 111 2.0E-29 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 XFC3_03635 9f2b07a484326c0a08223e040c541ccb 155 SUPERFAMILY SSF53098 11 146 1.37E-30 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFC3_03635 9f2b07a484326c0a08223e040c541ccb 155 Gene3D G3DSA:3.30.420.140 10 147 2.0E-33 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 XFC3_00385 21958886c4e34a915988112374615a6b 213 Gene3D G3DSA:3.40.50.150 28 211 6.8E-52 T 11-10-2018 XFC3_00385 21958886c4e34a915988112374615a6b 213 Pfam PF01728 FtsJ-like methyltransferase 29 203 2.8E-49 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 XFC3_00385 21958886c4e34a915988112374615a6b 213 PIRSF PIRSF005461 1 212 2.1E-70 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 XFC3_00385 21958886c4e34a915988112374615a6b 213 SUPERFAMILY SSF53335 3 204 1.89E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_00385 21958886c4e34a915988112374615a6b 213 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 205 26.573 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 XFC3_05705 4099616cb996e683464b1ed24076221b 70 ProDom PD272324 XF1567/XF1672 1 70 1.0E-31 T 11-10-2018 IPR020247 Uncharacterised protein family XF1567 XFC3_06890 4099616cb996e683464b1ed24076221b 70 ProDom PD272324 XF1567/XF1672 1 70 1.0E-31 T 11-10-2018 IPR020247 Uncharacterised protein family XF1567 XFC3_08975 c2357ab282ece9b61f6b4f8d4693cd4e 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 1.8E-28 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 XFC3_08975 c2357ab282ece9b61f6b4f8d4693cd4e 156 SUPERFAMILY SSF81573 62 121 1.31E-10 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily XFC3_08975 c2357ab282ece9b61f6b4f8d4693cd4e 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 2.3E-37 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 XFC3_08975 c2357ab282ece9b61f6b4f8d4693cd4e 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.602 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 XFC3_08975 c2357ab282ece9b61f6b4f8d4693cd4e 156 Gene3D G3DSA:1.20.5.620 62 122 9.0E-11 T 11-10-2018 XFC3_11540 42d5e3c1e6def9e3c88a987ef58f028e 577 Gene3D G3DSA:3.40.50.300 302 577 6.7E-104 T 11-10-2018 XFC3_11540 42d5e3c1e6def9e3c88a987ef58f028e 577 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 15 577 2.0E-266 T 11-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 XFC3_11540 42d5e3c1e6def9e3c88a987ef58f028e 577 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 48 152 5.9E-19 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal XFC3_11540 42d5e3c1e6def9e3c88a987ef58f028e 577 SUPERFAMILY SSF52540 186 575 1.53E-98 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11540 42d5e3c1e6def9e3c88a987ef58f028e 577 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 395 409 - T 11-10-2018 IPR001482 Type II/IV secretion system protein XFC3_11540 42d5e3c1e6def9e3c88a987ef58f028e 577 SUPERFAMILY SSF160246 11 148 2.2E-34 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily XFC3_11540 42d5e3c1e6def9e3c88a987ef58f028e 577 Gene3D G3DSA:3.30.300.160 69 149 5.2E-8 T 11-10-2018 XFC3_11540 42d5e3c1e6def9e3c88a987ef58f028e 577 Pfam PF00437 Type II/IV secretion system protein 200 467 8.3E-89 T 11-10-2018 IPR001482 Type II/IV secretion system protein XFC3_11540 42d5e3c1e6def9e3c88a987ef58f028e 577 Gene3D G3DSA:3.30.450.90 176 300 1.1E-48 T 11-10-2018 XFC3_05050 e62e52e236540324b13d54d79dfa7650 485 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 462 2.9E-161 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 XFC3_05050 e62e52e236540324b13d54d79dfa7650 485 SUPERFAMILY SSF56235 2 255 4.72E-65 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFC3_05050 e62e52e236540324b13d54d79dfa7650 485 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 462 44.87 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 XFC3_05050 e62e52e236540324b13d54d79dfa7650 485 Gene3D G3DSA:3.40.50.2020 273 442 2.0E-145 T 11-10-2018 XFC3_05050 e62e52e236540324b13d54d79dfa7650 485 SUPERFAMILY SSF53271 248 471 5.25E-70 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like XFC3_05050 e62e52e236540324b13d54d79dfa7650 485 Pfam PF13522 Glutamine amidotransferase domain 57 206 4.5E-15 T 11-10-2018 XFC3_05050 e62e52e236540324b13d54d79dfa7650 485 PIRSF PIRSF000485 1 476 2.7E-155 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 XFC3_05050 e62e52e236540324b13d54d79dfa7650 485 Gene3D G3DSA:3.60.20.10 2 463 2.0E-145 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFC3_10890 33eda8d287a1fd2956a5d5cb17d1dbc7 146 Pfam PF05258 Protein of unknown function (DUF721) 21 92 3.0E-11 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 XFC3_10625 ececeaffdb55a833772fd0c032d4ecd5 239 Gene3D G3DSA:3.20.20.370 1 228 4.6E-56 T 11-10-2018 XFC3_10625 ececeaffdb55a833772fd0c032d4ecd5 239 SUPERFAMILY SSF88713 22 215 7.51E-42 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XFC3_10625 ececeaffdb55a833772fd0c032d4ecd5 239 Pfam PF01522 Polysaccharide deacetylase 57 194 2.2E-32 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 SUPERFAMILY SSF103491 14 430 1.02E-117 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 434 1.0E-116 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 PIRSF PIRSF004557 11 445 7.5E-111 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 439 27.06 T 11-10-2018 IPR026593 Protein translocase subunit SecY XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-87 T 11-10-2018 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-87 T 11-10-2018 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 408 426 1.9E-87 T 11-10-2018 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 321 343 1.9E-87 T 11-10-2018 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 1.9E-87 T 11-10-2018 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 274 293 1.9E-87 T 11-10-2018 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 376 394 1.9E-87 T 11-10-2018 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 1.9E-87 T 11-10-2018 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-87 T 11-10-2018 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 Pfam PF00344 SecY translocase 76 422 2.7E-104 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFC3_08865 bd363498a0e9d61a50633ec3dac2c7ad 457 Gene3D G3DSA:1.10.3370.10 11 435 7.8E-146 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFC3_03945 68423c1d7e8057aa49c6d66a6cae6883 343 Gene3D G3DSA:1.10.8.60 144 212 1.3E-20 T 11-10-2018 XFC3_03945 68423c1d7e8057aa49c6d66a6cae6883 343 SUPERFAMILY SSF52540 2 210 5.93E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_03945 68423c1d7e8057aa49c6d66a6cae6883 343 SUPERFAMILY SSF48019 212 334 2.04E-22 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 XFC3_03945 68423c1d7e8057aa49c6d66a6cae6883 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 5.7E-22 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 XFC3_03945 68423c1d7e8057aa49c6d66a6cae6883 343 Gene3D G3DSA:1.20.272.10 214 341 1.6E-23 T 11-10-2018 XFC3_03945 68423c1d7e8057aa49c6d66a6cae6883 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 333 8.8E-96 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 XFC3_03945 68423c1d7e8057aa49c6d66a6cae6883 343 Gene3D G3DSA:3.40.50.300 1 138 1.8E-38 T 11-10-2018 XFC3_10930 c8ebac79e49b92923978a19b9bd0b876 423 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 19 372 1.2E-124 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_10930 c8ebac79e49b92923978a19b9bd0b876 423 Pfam PF01098 Cell cycle protein 23 372 6.5E-102 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_10930 c8ebac79e49b92923978a19b9bd0b876 423 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 17 381 37.787 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_05650 b3038eec64af20850668f7122dd2bcff 122 Pfam PF13262 Protein of unknown function (DUF4054) 10 112 4.8E-24 T 11-10-2018 IPR025127 Protein of unknown function DUF4054 XFC3_09365 dba5f2a2ba513e90ec4453b46cbeb6cf 185 Pfam PF01765 Ribosome recycling factor 20 183 7.2E-62 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 XFC3_09365 dba5f2a2ba513e90ec4453b46cbeb6cf 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 6.3E-70 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 XFC3_09365 dba5f2a2ba513e90ec4453b46cbeb6cf 185 Gene3D G3DSA:3.30.1360.40 31 105 3.9E-66 T 11-10-2018 XFC3_09365 dba5f2a2ba513e90ec4453b46cbeb6cf 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.089 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 XFC3_09365 dba5f2a2ba513e90ec4453b46cbeb6cf 185 SUPERFAMILY SSF55194 1 185 1.96E-68 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 XFC3_09365 dba5f2a2ba513e90ec4453b46cbeb6cf 185 Gene3D G3DSA:1.10.132.20 12 182 3.9E-66 T 11-10-2018 XFC3_03670 d726299ebcd5cf656c6dde33b5c11011 304 Gene3D G3DSA:3.40.190.10 109 198 1.7E-62 T 11-10-2018 XFC3_03670 d726299ebcd5cf656c6dde33b5c11011 304 Pfam PF01634 ATP phosphoribosyltransferase 60 223 2.8E-43 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XFC3_03670 d726299ebcd5cf656c6dde33b5c11011 304 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 13 201 5.0E-52 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XFC3_03670 d726299ebcd5cf656c6dde33b5c11011 304 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 162 183 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 XFC3_03670 d726299ebcd5cf656c6dde33b5c11011 304 SUPERFAMILY SSF53850 12 227 4.46E-59 T 11-10-2018 XFC3_03670 d726299ebcd5cf656c6dde33b5c11011 304 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 207 302 4.2E-16 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XFC3_03670 d726299ebcd5cf656c6dde33b5c11011 304 Gene3D G3DSA:3.30.70.120 232 303 6.0E-8 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XFC3_03670 d726299ebcd5cf656c6dde33b5c11011 304 Gene3D G3DSA:3.40.190.10 13 226 1.7E-62 T 11-10-2018 XFC3_03670 d726299ebcd5cf656c6dde33b5c11011 304 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 12 304 29.759 T 11-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 XFC3_03670 d726299ebcd5cf656c6dde33b5c11011 304 Pfam PF08029 HisG, C-terminal domain 231 301 3.0E-8 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XFC3_04155 af109f4dfcc7c23a48c9b90307362539 91 Gene3D G3DSA:3.40.1350.10 3 91 1.9E-27 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XFC3_04155 af109f4dfcc7c23a48c9b90307362539 91 Pfam PF08774 VRR-NUC domain 31 82 9.6E-7 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFC3_04155 af109f4dfcc7c23a48c9b90307362539 91 SMART SM00990 4 84 1.1E-13 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFC3_02445 f75155e1586861836a5735f517edda53 419 Pfam PF04235 Protein of unknown function (DUF418) 251 407 2.2E-42 T 11-10-2018 IPR007349 Domain of unknown function DUF418 XFC3_04000 d189903626eb6a4ab6e7f5f7dbe9280f 150 Pfam PF00075 RNase H 2 139 3.0E-45 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 XFC3_04000 d189903626eb6a4ab6e7f5f7dbe9280f 150 Hamap MF_00042 Ribonuclease H [rnhA]. 1 149 35.556 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 XFC3_04000 d189903626eb6a4ab6e7f5f7dbe9280f 150 SUPERFAMILY SSF53098 2 138 1.64E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFC3_04000 d189903626eb6a4ab6e7f5f7dbe9280f 150 Gene3D G3DSA:3.30.420.10 1 149 9.4E-56 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFC3_03180 fc623a395a9d5ed77e6f49726efafe7a 237 SUPERFAMILY SSF52172 9 134 4.41E-40 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_03180 fc623a395a9d5ed77e6f49726efafe7a 237 Gene3D G3DSA:3.40.50.2300 2 130 2.8E-37 T 11-10-2018 XFC3_03180 fc623a395a9d5ed77e6f49726efafe7a 237 Pfam PF00072 Response regulator receiver domain 11 121 8.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_03180 fc623a395a9d5ed77e6f49726efafe7a 237 SMART SM00862 155 229 2.3E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFC3_03180 fc623a395a9d5ed77e6f49726efafe7a 237 Gene3D G3DSA:1.10.10.10 134 234 1.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_03180 fc623a395a9d5ed77e6f49726efafe7a 237 SUPERFAMILY SSF46894 130 230 3.12E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XFC3_03180 fc623a395a9d5ed77e6f49726efafe7a 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 1.2E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFC3_03180 fc623a395a9d5ed77e6f49726efafe7a 237 SMART SM00448 9 121 3.2E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_03035 9c7276982d4516c96b7ee40e4088bdd5 228 Pfam PF10531 SLBB domain 123 175 4.3E-10 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_03035 9c7276982d4516c96b7ee40e4088bdd5 228 Gene3D G3DSA:3.10.560.10 107 204 2.5E-16 T 11-10-2018 XFC3_03035 9c7276982d4516c96b7ee40e4088bdd5 228 Pfam PF02563 Polysaccharide biosynthesis/export protein 42 116 3.5E-18 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 XFC3_01740 905ae0de74cdbc160a3e75c7aa1e85a8 101 Pfam PF13466 STAS domain 14 93 1.2E-11 T 11-10-2018 IPR002645 STAS domain XFC3_01740 905ae0de74cdbc160a3e75c7aa1e85a8 101 Gene3D G3DSA:3.30.750.24 5 101 7.3E-9 T 11-10-2018 IPR036513 STAS domain superfamily XFC3_01740 905ae0de74cdbc160a3e75c7aa1e85a8 101 SUPERFAMILY SSF52091 1 98 1.75E-11 T 11-10-2018 IPR036513 STAS domain superfamily XFC3_06575 9917cc5a891632c66d6c66eac82d44fb 114 Pfam PF01042 Endoribonuclease L-PSP 10 113 1.9E-22 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 XFC3_06575 9917cc5a891632c66d6c66eac82d44fb 114 Gene3D G3DSA:3.30.1330.40 1 114 3.6E-37 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XFC3_06575 9917cc5a891632c66d6c66eac82d44fb 114 SUPERFAMILY SSF55298 3 114 2.83E-28 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XFC3_12355 8de364c5815755262de134f77eeabea6 437 Pfam PF01420 Type I restriction modification DNA specificity domain 4 181 1.9E-20 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XFC3_12355 8de364c5815755262de134f77eeabea6 437 SUPERFAMILY SSF116734 3 197 1.8E-35 T 11-10-2018 XFC3_12355 8de364c5815755262de134f77eeabea6 437 SUPERFAMILY SSF116734 221 430 2.13E-26 T 11-10-2018 XFC3_12355 8de364c5815755262de134f77eeabea6 437 Gene3D G3DSA:3.90.220.20 2 176 1.3E-29 T 11-10-2018 XFC3_12355 8de364c5815755262de134f77eeabea6 437 Gene3D G3DSA:3.90.220.20 223 424 5.4E-26 T 11-10-2018 XFC3_10840 f2c6cab9ec3e2ddf8743c218e3c0d326 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 1.2E-166 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XFC3_10840 f2c6cab9ec3e2ddf8743c218e3c0d326 467 SUPERFAMILY SSF52374 4 296 9.12E-102 T 11-10-2018 XFC3_10840 f2c6cab9ec3e2ddf8743c218e3c0d326 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFC3_10840 f2c6cab9ec3e2ddf8743c218e3c0d326 467 Gene3D G3DSA:3.40.50.620 2 314 3.6E-126 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_10840 f2c6cab9ec3e2ddf8743c218e3c0d326 467 SUPERFAMILY SSF48163 299 461 9.16E-38 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XFC3_10840 f2c6cab9ec3e2ddf8743c218e3c0d326 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 305 2.8E-98 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 XFC3_10840 f2c6cab9ec3e2ddf8743c218e3c0d326 467 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 29.857 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XFC3_10840 f2c6cab9ec3e2ddf8743c218e3c0d326 467 Gene3D G3DSA:1.10.10.350 369 466 3.9E-23 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XFC3_10840 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 6.2E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFC3_10840 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 6.2E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFC3_10840 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 6.2E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFC3_10840 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 6.2E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFC3_10840 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 6.2E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFC3_06070 28a4963b443f7a6ac230c6692e12ead2 114 Pfam PF01230 HIT domain 12 108 5.5E-23 T 11-10-2018 IPR001310 Histidine triad (HIT) protein XFC3_06070 28a4963b443f7a6ac230c6692e12ead2 114 PRINTS PR00332 Histidine triad family signature 27 45 5.4E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein XFC3_06070 28a4963b443f7a6ac230c6692e12ead2 114 PRINTS PR00332 Histidine triad family signature 96 106 5.4E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein XFC3_06070 28a4963b443f7a6ac230c6692e12ead2 114 PRINTS PR00332 Histidine triad family signature 6 22 5.4E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein XFC3_06070 28a4963b443f7a6ac230c6692e12ead2 114 ProSitePatterns PS00892 HIT domain signature. 89 107 - T 11-10-2018 IPR019808 Histidine triad, conserved site XFC3_06070 28a4963b443f7a6ac230c6692e12ead2 114 SUPERFAMILY SSF54197 1 112 6.5E-33 T 11-10-2018 IPR036265 HIT-like superfamily XFC3_06070 28a4963b443f7a6ac230c6692e12ead2 114 Gene3D G3DSA:3.30.428.10 1 111 1.5E-31 T 11-10-2018 IPR036265 HIT-like superfamily XFC3_03135 5bb3dc6d1d6d066a93282ab765e04333 84 Pfam PF03658 RnfH family Ubiquitin 1 78 1.5E-18 T 11-10-2018 IPR005346 RnfH protein XFC3_03135 5bb3dc6d1d6d066a93282ab765e04333 84 Hamap MF_00460 Protein RnfH [rnfH]. 1 84 18.524 T 11-10-2018 IPR005346 RnfH protein XFC3_03135 5bb3dc6d1d6d066a93282ab765e04333 84 SUPERFAMILY SSF54285 2 70 1.74E-14 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp XFC3_03135 5bb3dc6d1d6d066a93282ab765e04333 84 Gene3D G3DSA:3.10.20.280 1 80 1.3E-18 T 11-10-2018 IPR037021 RnfH superfamily XFC3_10910 87ef987e0a0c6092b98b3ea7741d721f 278 Pfam PF08478 POTRA domain, FtsQ-type 35 103 5.6E-17 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type XFC3_10910 87ef987e0a0c6092b98b3ea7741d721f 278 Gene3D G3DSA:3.40.50.11690 104 231 6.1E-33 T 11-10-2018 XFC3_10910 87ef987e0a0c6092b98b3ea7741d721f 278 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 4 227 22.688 T 11-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 XFC3_10910 87ef987e0a0c6092b98b3ea7741d721f 278 Pfam PF03799 Cell division protein FtsQ 107 219 1.2E-18 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB XFC3_10910 87ef987e0a0c6092b98b3ea7741d721f 278 Gene3D G3DSA:3.10.20.310 33 103 5.5E-21 T 11-10-2018 XFC3_04810 aa7cba501d60491b2b193c6a3086c4dd 191 Gene3D G3DSA:3.40.109.10 7 169 5.5E-35 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 XFC3_04810 aa7cba501d60491b2b193c6a3086c4dd 191 SUPERFAMILY SSF55469 8 188 8.51E-32 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 XFC3_04810 aa7cba501d60491b2b193c6a3086c4dd 191 PIRSF PIRSF000232 3 191 1.2E-60 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like XFC3_04810 aa7cba501d60491b2b193c6a3086c4dd 191 Pfam PF00881 Nitroreductase family 12 168 2.0E-20 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 XFC3_11500 ea2defc0497a150d07408da9549edab6 445 SMART SM00387 342 445 6.6E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_11500 ea2defc0497a150d07408da9549edab6 445 Gene3D G3DSA:1.10.287.130 185 302 1.3E-20 T 11-10-2018 XFC3_11500 ea2defc0497a150d07408da9549edab6 445 SUPERFAMILY SSF47384 219 302 1.8E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFC3_11500 ea2defc0497a150d07408da9549edab6 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 8.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_11500 ea2defc0497a150d07408da9549edab6 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 8.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFC3_11500 ea2defc0497a150d07408da9549edab6 445 SUPERFAMILY SSF55874 306 443 2.1E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_11500 ea2defc0497a150d07408da9549edab6 445 SMART SM00388 236 302 4.9E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFC3_11500 ea2defc0497a150d07408da9549edab6 445 Gene3D G3DSA:3.30.565.10 304 445 9.8E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_11500 ea2defc0497a150d07408da9549edab6 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 302 4.6E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFC3_11500 ea2defc0497a150d07408da9549edab6 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 436 1.3E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFC3_04860 41ca846c11cce020c648ed19811b64f7 409 Pfam PF04932 O-Antigen ligase 177 332 3.9E-14 T 11-10-2018 IPR007016 O-antigen ligase-related XFC3_00435 f2e86e496132f6b09b847e532df27384 460 SMART SM00812 33 357 1.2E-15 T 11-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XFC3_00435 f2e86e496132f6b09b847e532df27384 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 143 162 1.1E-6 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XFC3_00435 f2e86e496132f6b09b847e532df27384 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 95 111 1.1E-6 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XFC3_00435 f2e86e496132f6b09b847e532df27384 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 283 304 1.1E-6 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XFC3_00435 f2e86e496132f6b09b847e532df27384 460 Gene3D G3DSA:2.60.120.260 341 453 2.6E-24 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFC3_00435 f2e86e496132f6b09b847e532df27384 460 Gene3D G3DSA:3.20.20.80 22 332 2.0E-113 T 11-10-2018 XFC3_00435 f2e86e496132f6b09b847e532df27384 460 SUPERFAMILY SSF49785 347 452 6.26E-13 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFC3_00435 f2e86e496132f6b09b847e532df27384 460 Pfam PF00754 F5/8 type C domain 348 445 9.6E-12 T 11-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain XFC3_00435 f2e86e496132f6b09b847e532df27384 460 SUPERFAMILY SSF51445 30 326 3.68E-84 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFC3_00435 f2e86e496132f6b09b847e532df27384 460 Pfam PF01120 Alpha-L-fucosidase 70 324 2.1E-41 T 11-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XFC3_04910 6b96ccf88415696a0eb2e5aabd2d8fc3 203 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 17 194 3.3E-65 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XFC3_04910 6b96ccf88415696a0eb2e5aabd2d8fc3 203 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 12 195 38.868 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XFC3_04910 6b96ccf88415696a0eb2e5aabd2d8fc3 203 Gene3D G3DSA:1.10.286.10 1 60 5.3E-21 T 11-10-2018 XFC3_04910 6b96ccf88415696a0eb2e5aabd2d8fc3 203 Gene3D G3DSA:3.30.1130.10 64 197 2.7E-52 T 11-10-2018 XFC3_04910 6b96ccf88415696a0eb2e5aabd2d8fc3 203 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 122 132 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XFC3_04910 6b96ccf88415696a0eb2e5aabd2d8fc3 203 SUPERFAMILY SSF55620 6 195 7.41E-76 T 11-10-2018 XFC3_04910 6b96ccf88415696a0eb2e5aabd2d8fc3 203 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 74 90 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XFC3_04910 6b96ccf88415696a0eb2e5aabd2d8fc3 203 Pfam PF01227 GTP cyclohydrolase I 17 194 1.3E-73 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XFC3_00870 462a5b7cccdcb5759498ab2e516ca20d 308 SUPERFAMILY SSF56104 5 305 2.75E-97 T 11-10-2018 XFC3_00870 462a5b7cccdcb5759498ab2e516ca20d 308 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 19 303 1.4E-74 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 XFC3_00870 462a5b7cccdcb5759498ab2e516ca20d 308 ProSitePatterns PS01058 SAICAR synthetase signature 2. 216 224 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFC3_00870 462a5b7cccdcb5759498ab2e516ca20d 308 Gene3D G3DSA:3.30.200.20 3 115 8.0E-28 T 11-10-2018 XFC3_00870 462a5b7cccdcb5759498ab2e516ca20d 308 Gene3D G3DSA:3.30.470.20 117 260 1.9E-58 T 11-10-2018 XFC3_00870 462a5b7cccdcb5759498ab2e516ca20d 308 ProSitePatterns PS01057 SAICAR synthetase signature 1. 117 131 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFC3_00870 462a5b7cccdcb5759498ab2e516ca20d 308 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 304 27.082 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFC3_00870 462a5b7cccdcb5759498ab2e516ca20d 308 Pfam PF01259 SAICAR synthetase 18 279 1.1E-96 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFC3_02705 585e9f6faadc667a38deadd8ac9ed9f3 90 PIRSF PIRSF003113 1 90 6.8E-22 T 11-10-2018 IPR002634 BolA protein XFC3_02705 585e9f6faadc667a38deadd8ac9ed9f3 90 Gene3D G3DSA:3.30.300.90 1 89 9.2E-25 T 11-10-2018 XFC3_02705 585e9f6faadc667a38deadd8ac9ed9f3 90 SUPERFAMILY SSF82657 4 85 2.09E-21 T 11-10-2018 IPR036065 BolA-like superfamily XFC3_02705 585e9f6faadc667a38deadd8ac9ed9f3 90 Pfam PF01722 BolA-like protein 12 83 9.7E-25 T 11-10-2018 IPR002634 BolA protein XFC3_04845 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 70 90 8.4E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFC3_04845 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 53 70 8.4E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFC3_04845 fabaf4de59a16c7851fc9b17567bf576 90 SUPERFAMILY SSF46689 4 89 4.3E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFC3_04845 fabaf4de59a16c7851fc9b17567bf576 90 Pfam PF02954 Bacterial regulatory protein, Fis family 48 87 8.1E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFC3_04845 fabaf4de59a16c7851fc9b17567bf576 90 PIRSF PIRSF002097 2 90 3.5E-34 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XFC3_04845 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01591 DNA-binding protein FIS signature 18 34 5.3E-9 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XFC3_04845 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01591 DNA-binding protein FIS signature 34 49 5.3E-9 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XFC3_04845 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01591 DNA-binding protein FIS signature 49 61 5.3E-9 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XFC3_04845 fabaf4de59a16c7851fc9b17567bf576 90 Gene3D G3DSA:1.10.10.60 3 89 6.8E-27 T 11-10-2018 XFC3_00740 063c80df711e69827b1d7d1c77177ff9 246 SUPERFAMILY SSF51735 11 245 5.82E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_00740 063c80df711e69827b1d7d1c77177ff9 246 Gene3D G3DSA:3.40.50.720 8 246 1.4E-71 T 11-10-2018 XFC3_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 5.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 5.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_00740 063c80df711e69827b1d7d1c77177ff9 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 245 1.3E-51 T 11-10-2018 XFC3_00740 063c80df711e69827b1d7d1c77177ff9 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 193 2.0E-6 T 11-10-2018 XFC3_08825 907e6f5db7b541eb49322386390837f3 377 Gene3D G3DSA:3.40.50.1820 61 377 3.4E-83 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_08825 907e6f5db7b541eb49322386390837f3 377 Pfam PF00561 alpha/beta hydrolase fold 70 202 2.6E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFC3_08825 907e6f5db7b541eb49322386390837f3 377 SUPERFAMILY SSF53474 66 373 1.32E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_08740 3001268b82946bafc6014574e4bfb06b 346 Gene3D G3DSA:1.10.620.20 26 317 2.6E-78 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 XFC3_08740 3001268b82946bafc6014574e4bfb06b 346 SUPERFAMILY SSF47240 22 346 3.36E-85 T 11-10-2018 IPR009078 Ferritin-like superfamily XFC3_08740 3001268b82946bafc6014574e4bfb06b 346 Pfam PF00268 Ribonucleotide reductase, small chain 31 304 2.8E-68 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFC3_08740 3001268b82946bafc6014574e4bfb06b 346 PIRSF PIRSF000355 1 346 9.9E-113 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFC3_08280 dac68daddcd321c025192d9794fc6e88 373 Pfam PF01098 Cell cycle protein 23 369 1.2E-97 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_08280 dac68daddcd321c025192d9794fc6e88 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 14 371 26.914 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_08280 dac68daddcd321c025192d9794fc6e88 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 326 350 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_08280 dac68daddcd321c025192d9794fc6e88 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 368 2.8E-117 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFC3_07090 6f1a98d4f334e3924960b6ddb728fa0e 376 SUPERFAMILY SSF53067 87 186 1.55E-8 T 11-10-2018 XFC3_07090 6f1a98d4f334e3924960b6ddb728fa0e 376 Gene3D G3DSA:3.30.1490.300 106 164 4.2E-6 T 11-10-2018 XFC3_07090 6f1a98d4f334e3924960b6ddb728fa0e 376 Pfam PF05137 Fimbrial assembly protein (PilN) 288 359 4.4E-12 T 11-10-2018 IPR007813 Fimbrial assembly PilN XFC3_02845 f9ff694daad7e2a3416fc6cdb60bc678 536 Pfam PF03023 MviN-like protein 31 498 1.9E-119 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFC3_02845 f9ff694daad7e2a3416fc6cdb60bc678 536 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 6 493 19.417 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFC3_02845 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 262 288 8.6E-70 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFC3_02845 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 435 452 8.6E-70 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFC3_02845 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 136 160 8.6E-70 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFC3_02845 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 160 181 8.6E-70 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFC3_02845 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 360 379 8.6E-70 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFC3_02845 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 55 71 8.6E-70 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFC3_02845 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 36 55 8.6E-70 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFC3_02845 f9ff694daad7e2a3416fc6cdb60bc678 536 PIRSF PIRSF002869 1 533 3.9E-140 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFC3_02845 f9ff694daad7e2a3416fc6cdb60bc678 536 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 6 524 3.4E-116 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFC3_10590 657063f7e8f31c524a551f5d531fe445 443 Gene3D G3DSA:3.40.50.2000 269 431 4.2E-18 T 11-10-2018 XFC3_10590 657063f7e8f31c524a551f5d531fe445 443 SUPERFAMILY SSF53756 88 435 3.92E-31 T 11-10-2018 XFC3_10590 657063f7e8f31c524a551f5d531fe445 443 Pfam PF13692 Glycosyl transferases group 1 271 405 3.6E-25 T 11-10-2018 XFC3_08215 6a8e0ceabb85296fd50b1eeab73921e2 188 SUPERFAMILY SSF81342 5 180 9.42E-36 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 XFC3_08215 6a8e0ceabb85296fd50b1eeab73921e2 188 Pfam PF01292 Prokaryotic cytochrome b561 9 180 9.3E-29 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 XFC3_06340 842bbebb15be42154b9a886b02e945d5 220 Pfam PF11679 Protein of unknown function (DUF3275) 14 213 1.0E-90 T 11-10-2018 IPR021693 Protein of unknown function DUF3275 XFC3_01460 14b1c73d440e3d5b754ba0966b8eb72f 157 SUPERFAMILY SSF75217 1 154 4.36E-49 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases XFC3_01460 14b1c73d440e3d5b754ba0966b8eb72f 157 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 3 155 1.2E-48 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XFC3_01460 14b1c73d440e3d5b754ba0966b8eb72f 157 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.733 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XFC3_01460 14b1c73d440e3d5b754ba0966b8eb72f 157 Gene3D G3DSA:3.40.1280.10 1 156 1.1E-49 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XFC3_01460 14b1c73d440e3d5b754ba0966b8eb72f 157 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.9E-48 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XFC3_01460 14b1c73d440e3d5b754ba0966b8eb72f 157 PIRSF PIRSF004505 1 155 3.8E-48 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XFC3_12140 5fdc6e4ae3625a0b94c5fe21e79b994d 282 SUPERFAMILY SSF52172 142 278 1.85E-24 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_12140 5fdc6e4ae3625a0b94c5fe21e79b994d 282 Gene3D G3DSA:3.40.50.2300 140 277 1.4E-22 T 11-10-2018 XFC3_12140 5fdc6e4ae3625a0b94c5fe21e79b994d 282 Pfam PF00072 Response regulator receiver domain 145 266 2.8E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_12140 5fdc6e4ae3625a0b94c5fe21e79b994d 282 Pfam PF00072 Response regulator receiver domain 18 130 1.9E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_12140 5fdc6e4ae3625a0b94c5fe21e79b994d 282 SUPERFAMILY SSF52172 15 136 2.7E-20 T 11-10-2018 IPR011006 CheY-like superfamily XFC3_12140 5fdc6e4ae3625a0b94c5fe21e79b994d 282 SMART SM00448 143 266 4.8E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_12140 5fdc6e4ae3625a0b94c5fe21e79b994d 282 SMART SM00448 16 131 5.4E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFC3_12140 5fdc6e4ae3625a0b94c5fe21e79b994d 282 Gene3D G3DSA:3.40.50.2300 4 139 1.0E-17 T 11-10-2018 XFC3_05330 87c11f5c9cd2915095687a4f63aecd32 259 Gene3D G3DSA:2.40.30.10 1 97 7.9E-28 T 11-10-2018 XFC3_05330 87c11f5c9cd2915095687a4f63aecd32 259 SUPERFAMILY SSF63380 7 100 4.95E-24 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XFC3_05330 87c11f5c9cd2915095687a4f63aecd32 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 229 1.5E-10 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 XFC3_05330 87c11f5c9cd2915095687a4f63aecd32 259 Pfam PF00970 Oxidoreductase FAD-binding domain 21 98 1.0E-6 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 XFC3_05330 87c11f5c9cd2915095687a4f63aecd32 259 SUPERFAMILY SSF52343 104 257 1.57E-39 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XFC3_05330 87c11f5c9cd2915095687a4f63aecd32 259 Gene3D G3DSA:3.40.50.80 101 255 5.0E-42 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XFC3_02075 dadfb647880215a00ffcede7c322fee4 240 SUPERFAMILY SSF52317 28 204 3.15E-36 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_02075 dadfb647880215a00ffcede7c322fee4 240 Gene3D G3DSA:3.40.50.880 17 240 1.3E-47 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_02075 dadfb647880215a00ffcede7c322fee4 240 Pfam PF00117 Glutamine amidotransferase class-I 40 193 1.2E-19 T 11-10-2018 IPR017926 Glutamine amidotransferase XFC3_01525 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Pfam PF03796 DnaB-like helicase C terminal domain 207 461 1.9E-116 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 XFC3_01525 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Gene3D G3DSA:3.40.50.300 190 467 2.2E-108 T 11-10-2018 XFC3_01525 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Gene3D G3DSA:1.10.860.10 23 183 1.7E-51 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal XFC3_01525 5df8d370cb487a8fdf5cd9d4e9b78d84 471 SUPERFAMILY SSF48024 27 139 1.57E-36 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 XFC3_01525 5df8d370cb487a8fdf5cd9d4e9b78d84 471 SUPERFAMILY SSF52540 205 454 2.41E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01525 5df8d370cb487a8fdf5cd9d4e9b78d84 471 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 29 463 7.6E-176 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 XFC3_01525 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Pfam PF00772 DnaB-like helicase N terminal domain 29 130 4.2E-33 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 XFC3_03655 bad8a7bd1a110adfc5eefe57a43455c4 430 Gene3D G3DSA:3.90.1380.10 1 78 3.1E-12 T 11-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily XFC3_03655 bad8a7bd1a110adfc5eefe57a43455c4 430 Gene3D G3DSA:3.40.50.1100 100 403 4.0E-121 T 11-10-2018 XFC3_03655 bad8a7bd1a110adfc5eefe57a43455c4 430 SUPERFAMILY SSF53686 1 428 3.4E-121 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XFC3_03655 bad8a7bd1a110adfc5eefe57a43455c4 430 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 94 108 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 XFC3_03655 bad8a7bd1a110adfc5eefe57a43455c4 430 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 94 377 2.1E-22 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XFC3_03655 bad8a7bd1a110adfc5eefe57a43455c4 430 Pfam PF14821 Threonine synthase N terminus 3 59 1.2E-10 T 11-10-2018 IPR029144 Threonine synthase, N-terminal XFC3_03655 bad8a7bd1a110adfc5eefe57a43455c4 430 Gene3D G3DSA:3.40.50.1100 89 397 4.0E-121 T 11-10-2018 XFC3_03655 bad8a7bd1a110adfc5eefe57a43455c4 430 TIGRFAM TIGR00260 thrC: threonine synthase 80 396 9.0E-69 T 11-10-2018 IPR004450 Threonine synthase-like XFC3_08360 7ffd119a891f9798337b74fa9c9d909d 194 SUPERFAMILY SSF51197 6 192 1.0E-59 T 11-10-2018 XFC3_08360 7ffd119a891f9798337b74fa9c9d909d 194 Gene3D G3DSA:2.60.120.590 8 194 2.2E-59 T 11-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily XFC3_08360 7ffd119a891f9798337b74fa9c9d909d 194 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 14 190 1.6E-32 T 11-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like XFC3_00355 254fa508b28fc01e4e5f72290d8757f1 450 Pfam PF01926 50S ribosome-binding GTPase 200 318 4.3E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_00355 254fa508b28fc01e4e5f72290d8757f1 450 Gene3D G3DSA:3.40.50.11060 18 138 6.6E-36 T 11-10-2018 XFC3_00355 254fa508b28fc01e4e5f72290d8757f1 450 SUPERFAMILY SSF52540 198 365 3.35E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_00355 254fa508b28fc01e4e5f72290d8757f1 450 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 6.6E-12 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_00355 254fa508b28fc01e4e5f72290d8757f1 450 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 6.6E-12 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_00355 254fa508b28fc01e4e5f72290d8757f1 450 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 6.6E-12 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFC3_00355 254fa508b28fc01e4e5f72290d8757f1 450 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 364 5.4E-144 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 XFC3_00355 254fa508b28fc01e4e5f72290d8757f1 450 Pfam PF13167 GTP-binding GTPase N-terminal 26 112 4.4E-29 T 11-10-2018 IPR025121 GTPase HflX, N-terminal XFC3_00355 254fa508b28fc01e4e5f72290d8757f1 450 Pfam PF16360 GTP-binding GTPase Middle Region 114 193 3.2E-26 T 11-10-2018 IPR032305 GTP-binding protein, middle domain XFC3_00355 254fa508b28fc01e4e5f72290d8757f1 450 PIRSF PIRSF006809 3 424 1.9E-138 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 XFC3_00355 254fa508b28fc01e4e5f72290d8757f1 450 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 199 359 1.6E-12 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFC3_00355 254fa508b28fc01e4e5f72290d8757f1 450 Hamap MF_00900 GTPase HflX [hflX]. 27 394 45.951 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 XFC3_00355 254fa508b28fc01e4e5f72290d8757f1 450 Gene3D G3DSA:3.40.50.300 198 373 1.1E-40 T 11-10-2018 XFC3_00825 2a839cd19687a287e398c307d2e6206d 118 SUPERFAMILY SSF55620 3 117 2.61E-39 T 11-10-2018 XFC3_00825 2a839cd19687a287e398c307d2e6206d 118 Gene3D G3DSA:3.30.479.10 1 118 9.8E-46 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 XFC3_00825 2a839cd19687a287e398c307d2e6206d 118 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 94 2.2E-32 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 XFC3_00825 2a839cd19687a287e398c307d2e6206d 118 PIRSF PIRSF006113 1 118 1.2E-48 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 XFC3_00825 2a839cd19687a287e398c307d2e6206d 118 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 116 6.3E-34 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 XFC3_07610 be6701ea42ea99a857a098866f5b2488 416 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 18 415 8.4E-176 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 XFC3_07610 be6701ea42ea99a857a098866f5b2488 416 PIRSF PIRSF005572 33 414 2.3E-48 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 XFC3_07610 be6701ea42ea99a857a098866f5b2488 416 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 227 246 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site XFC3_07610 be6701ea42ea99a857a098866f5b2488 416 Gene3D G3DSA:3.90.1150.10 20 408 2.4E-160 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFC3_07610 be6701ea42ea99a857a098866f5b2488 416 Gene3D G3DSA:3.40.640.10 47 306 2.4E-160 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFC3_07610 be6701ea42ea99a857a098866f5b2488 416 SUPERFAMILY SSF53383 15 413 9.59E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFC3_07610 be6701ea42ea99a857a098866f5b2488 416 Pfam PF00266 Aminotransferase class-V 36 404 1.7E-146 T 11-10-2018 IPR000192 Aminotransferase class V domain XFC3_07940 04889460fdebe1bf95aa0ddf33263911 402 Gene3D G3DSA:1.20.1530.20 8 382 1.0E-31 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily XFC3_07940 04889460fdebe1bf95aa0ddf33263911 402 Pfam PF00999 Sodium/hydrogen exchanger family 14 374 4.4E-24 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 XFC3_06715 aa20b2c459b1cab0e377177a2801e52c 426 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 93 410 1.0E-93 T 11-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 XFC3_06715 aa20b2c459b1cab0e377177a2801e52c 426 Gene3D G3DSA:1.20.1250.20 229 417 7.5E-59 T 11-10-2018 XFC3_06715 aa20b2c459b1cab0e377177a2801e52c 426 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 13 411 4.7E-86 T 11-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 XFC3_06715 aa20b2c459b1cab0e377177a2801e52c 426 Pfam PF07690 Major Facilitator Superfamily 19 372 2.2E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XFC3_06715 aa20b2c459b1cab0e377177a2801e52c 426 Gene3D G3DSA:1.20.1250.20 8 227 3.1E-58 T 11-10-2018 XFC3_06715 aa20b2c459b1cab0e377177a2801e52c 426 SUPERFAMILY SSF103473 11 411 1.15E-39 T 11-10-2018 IPR036259 MFS transporter superfamily XFC3_03515 4d7b3eb2a217f3de7b905349c8fc1716 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 530 608 6.1E-25 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XFC3_03515 4d7b3eb2a217f3de7b905349c8fc1716 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 11-10-2018 IPR020845 AMP-binding, conserved site XFC3_03515 4d7b3eb2a217f3de7b905349c8fc1716 647 Pfam PF00501 AMP-binding enzyme 85 521 2.3E-91 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XFC3_03515 4d7b3eb2a217f3de7b905349c8fc1716 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 644 51.549 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 XFC3_03515 4d7b3eb2a217f3de7b905349c8fc1716 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 641 4.0E-298 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 XFC3_03515 4d7b3eb2a217f3de7b905349c8fc1716 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 22 79 2.4E-20 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 XFC3_03515 4d7b3eb2a217f3de7b905349c8fc1716 647 Gene3D G3DSA:3.30.300.30 517 646 2.1E-31 T 11-10-2018 XFC3_03515 4d7b3eb2a217f3de7b905349c8fc1716 647 Gene3D G3DSA:3.40.50.12780 48 514 6.3E-100 T 11-10-2018 XFC3_03515 4d7b3eb2a217f3de7b905349c8fc1716 647 SUPERFAMILY SSF56801 9 641 2.09E-181 T 11-10-2018 XFC3_07270 45680eb1e080c3508cefa16d82b21059 353 Gene3D G3DSA:1.10.150.130 72 175 3.0E-9 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFC3_07270 45680eb1e080c3508cefa16d82b21059 353 SUPERFAMILY SSF56349 74 345 2.33E-37 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFC3_07270 45680eb1e080c3508cefa16d82b21059 353 Pfam PF00589 Phage integrase family 190 345 3.9E-6 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFC3_07270 45680eb1e080c3508cefa16d82b21059 353 Gene3D G3DSA:1.10.443.10 177 348 1.5E-19 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFC3_02675 27cc8e484d935e3a1605dc9398fef561 382 Gene3D G3DSA:3.90.1150.10 16 379 8.2E-126 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFC3_02675 27cc8e484d935e3a1605dc9398fef561 382 Pfam PF00155 Aminotransferase class I and II 28 379 6.4E-55 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XFC3_02675 27cc8e484d935e3a1605dc9398fef561 382 SUPERFAMILY SSF53383 2 380 1.61E-96 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFC3_02675 27cc8e484d935e3a1605dc9398fef561 382 Gene3D G3DSA:3.40.640.10 40 279 8.2E-126 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFC3_01695 61b62e63647898c5e7f6ee5c8c4a6283 128 Gene3D G3DSA:2.60.300.12 22 128 7.7E-35 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFC3_01695 61b62e63647898c5e7f6ee5c8c4a6283 128 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 9 128 35.265 T 11-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 XFC3_01695 61b62e63647898c5e7f6ee5c8c4a6283 128 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 24 128 1.1E-37 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 XFC3_01695 61b62e63647898c5e7f6ee5c8c4a6283 128 SUPERFAMILY SSF89360 23 117 1.04E-29 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFC3_01695 61b62e63647898c5e7f6ee5c8c4a6283 128 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 109 126 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 XFC3_01695 61b62e63647898c5e7f6ee5c8c4a6283 128 Pfam PF01521 Iron-sulphur cluster biosynthesis 23 123 2.7E-19 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 XFC3_04205 cef8fc02faee82795ca297939cfb778a 424 Pfam PF03583 Secretory lipase 134 212 1.9E-6 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XFC3_04205 cef8fc02faee82795ca297939cfb778a 424 SUPERFAMILY SSF53474 89 383 2.18E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_04205 cef8fc02faee82795ca297939cfb778a 424 PIRSF PIRSF029171 6 424 6.9E-73 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XFC3_04205 cef8fc02faee82795ca297939cfb778a 424 Gene3D G3DSA:3.40.50.1820 341 424 1.8E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_04205 cef8fc02faee82795ca297939cfb778a 424 Gene3D G3DSA:3.40.50.1820 35 259 1.3E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_04740 a89969ec34c7df104d937d8fcdfce5d2 228 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 5 225 4.0E-71 T 11-10-2018 IPR012808 Conserved hypothetical protein CHP02453 XFC3_04740 a89969ec34c7df104d937d8fcdfce5d2 228 Pfam PF09365 Conserved hypothetical protein (DUF2461) 8 219 1.2E-54 T 11-10-2018 IPR012808 Conserved hypothetical protein CHP02453 XFC3_04740 a89969ec34c7df104d937d8fcdfce5d2 228 PIRSF PIRSF028451 1 228 4.1E-95 T 11-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 XFC3_05605 101d6ee302450a7ea2fc9108f6e0e94f 90 SMART SM00966 16 56 4.7E-5 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XFC3_05605 101d6ee302450a7ea2fc9108f6e0e94f 90 SUPERFAMILY SSF89447 13 75 3.03E-11 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily XFC3_05605 101d6ee302450a7ea2fc9108f6e0e94f 90 Gene3D G3DSA:2.10.260.10 10 89 1.3E-15 T 11-10-2018 XFC3_05605 101d6ee302450a7ea2fc9108f6e0e94f 90 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 16 53 3.3E-8 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XFC3_07875 4614f1bd71492631b758d052b825fcbc 189 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 11 184 3.4E-43 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related XFC3_07875 4614f1bd71492631b758d052b825fcbc 189 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 186 20.51 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 XFC3_07875 4614f1bd71492631b758d052b825fcbc 189 Gene3D G3DSA:2.60.450.10 60 188 1.3E-13 T 11-10-2018 XFC3_07875 4614f1bd71492631b758d052b825fcbc 189 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 9 183 9.0E-43 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 SUPERFAMILY SSF52317 1 192 7.37E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 5.5E-14 T 11-10-2018 XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 5.5E-14 T 11-10-2018 XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 5.5E-14 T 11-10-2018 XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 Gene3D G3DSA:3.40.50.880 1 192 4.7E-62 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.2E-6 T 11-10-2018 XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.2E-6 T 11-10-2018 XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.5E-36 T 11-10-2018 XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.5E-36 T 11-10-2018 XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.5E-36 T 11-10-2018 XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.5E-36 T 11-10-2018 XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.5E-36 T 11-10-2018 XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.5E-36 T 11-10-2018 XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 1.6E-79 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFC3_00890 7c12a448ccac75b2aee96615c5faa568 194 Pfam PF00117 Glutamine amidotransferase class-I 4 190 7.7E-53 T 11-10-2018 IPR017926 Glutamine amidotransferase XFC3_02015 31de11b5fc226105f0d7ef17286e1a6c 122 SUPERFAMILY SSF53955 2 109 1.38E-20 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_02015 31de11b5fc226105f0d7ef17286e1a6c 122 Gene3D G3DSA:3.30.910.40 28 102 4.4E-10 T 11-10-2018 XFC3_00785 c50fa9f6b48fa62586c69cfdbb95683d 143 Pfam PF01957 NfeD-like C-terminal, partner-binding 8 142 1.9E-24 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain XFC3_11395 d7646acf0ded351a0cc24a64b13a9346 256 Gene3D G3DSA:2.10.109.10 119 252 4.4E-10 T 11-10-2018 XFC3_11395 d7646acf0ded351a0cc24a64b13a9346 256 Pfam PF00717 Peptidase S24-like 159 217 1.2E-9 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XFC3_11395 d7646acf0ded351a0cc24a64b13a9346 256 SMART SM00530 6 62 1.1E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_11395 d7646acf0ded351a0cc24a64b13a9346 256 SUPERFAMILY SSF47413 2 65 4.22E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_11395 d7646acf0ded351a0cc24a64b13a9346 256 Pfam PF01381 Helix-turn-helix 8 62 1.8E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_11395 d7646acf0ded351a0cc24a64b13a9346 256 SUPERFAMILY SSF51306 116 251 7.06E-20 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XFC3_11395 d7646acf0ded351a0cc24a64b13a9346 256 Gene3D G3DSA:1.10.260.40 2 70 2.1E-14 T 11-10-2018 XFC3_09010 fb633f547d0243c80d3d30dc78f6f6c7 457 Gene3D G3DSA:2.160.10.10 230 457 1.3E-59 T 11-10-2018 XFC3_09010 fb633f547d0243c80d3d30dc78f6f6c7 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 2.5E-7 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_09010 fb633f547d0243c80d3d30dc78f6f6c7 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 397 430 8.3E-6 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_09010 fb633f547d0243c80d3d30dc78f6f6c7 457 Gene3D G3DSA:3.90.550.10 6 228 1.8E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_09010 fb633f547d0243c80d3d30dc78f6f6c7 457 Pfam PF12804 MobA-like NTP transferase domain 10 135 6.4E-24 T 11-10-2018 IPR025877 MobA-like NTP transferase XFC3_09010 fb633f547d0243c80d3d30dc78f6f6c7 457 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 6 453 39.434 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 XFC3_09010 fb633f547d0243c80d3d30dc78f6f6c7 457 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 8 456 3.0E-192 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 XFC3_09010 fb633f547d0243c80d3d30dc78f6f6c7 457 SUPERFAMILY SSF51161 256 439 2.36E-44 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFC3_09010 fb633f547d0243c80d3d30dc78f6f6c7 457 SUPERFAMILY SSF53448 7 249 2.17E-56 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_04930 dfad5c41be08fa86a17eaaced70e20fd 700 Pfam PF12805 FUSC-like inner membrane protein yccS 37 319 1.0E-96 T 11-10-2018 IPR032692 Integral membrane protein YccS, N-terminal XFC3_04930 dfad5c41be08fa86a17eaaced70e20fd 700 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 13 679 6.0E-185 T 11-10-2018 IPR010019 Integral membrane protein, YccS XFC3_04930 dfad5c41be08fa86a17eaaced70e20fd 700 Pfam PF13515 Fusaric acid resistance protein-like 376 496 1.4E-19 T 11-10-2018 XFC3_04930 dfad5c41be08fa86a17eaaced70e20fd 700 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 2 679 3.0E-196 T 11-10-2018 IPR010020 Integral membrane protein, YccS/YhfK XFC3_01180 bc23bccfcfb2037189d46897ca7f9725 684 Pfam PF14067 LssY C-terminus 496 619 4.4E-13 T 11-10-2018 IPR025902 LssY-like C-terminal domain XFC3_01180 bc23bccfcfb2037189d46897ca7f9725 684 Pfam PF01569 PAP2 superfamily 356 435 3.2E-11 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XFC3_01180 bc23bccfcfb2037189d46897ca7f9725 684 Gene3D G3DSA:1.20.144.10 345 448 3.4E-16 T 11-10-2018 XFC3_01180 bc23bccfcfb2037189d46897ca7f9725 684 Pfam PF09335 SNARE associated Golgi protein 40 163 1.5E-17 T 11-10-2018 IPR032816 SNARE associated Golgi protein XFC3_01180 bc23bccfcfb2037189d46897ca7f9725 684 SUPERFAMILY SSF48317 246 442 1.28E-22 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XFC3_00950 cee4fa5642b6a72168fc5c602d47f110 321 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 43 291 2.1E-61 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 XFC3_00950 cee4fa5642b6a72168fc5c602d47f110 321 Gene3D G3DSA:1.20.1640.10 136 307 3.0E-9 T 11-10-2018 XFC3_00950 cee4fa5642b6a72168fc5c602d47f110 321 SUPERFAMILY SSF82866 78 296 2.49E-33 T 11-10-2018 XFC3_00950 cee4fa5642b6a72168fc5c602d47f110 321 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 8.7E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XFC3_00950 cee4fa5642b6a72168fc5c602d47f110 321 PRINTS PR01755 Bacterial translocase SecF protein signature 42 57 8.7E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XFC3_00950 cee4fa5642b6a72168fc5c602d47f110 321 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 8.7E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XFC3_00950 cee4fa5642b6a72168fc5c602d47f110 321 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 8.7E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XFC3_00950 cee4fa5642b6a72168fc5c602d47f110 321 Pfam PF02355 Protein export membrane protein 131 296 1.3E-47 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial XFC3_00950 cee4fa5642b6a72168fc5c602d47f110 321 Pfam PF07549 SecD/SecF GG Motif 40 64 7.8E-7 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site XFC3_00950 cee4fa5642b6a72168fc5c602d47f110 321 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 15 301 25.691 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 XFC3_08665 3250395a3529bf88fee4ef25a6be84a5 161 Pfam PF09900 Predicted membrane protein (DUF2127) 15 149 3.7E-35 T 11-10-2018 IPR021125 Protein of unknown function DUF2127 XFC3_01165 a0b64690370a0dd9b316c8e1b7c59a8d 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 192 1.3E-11 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XFC3_01165 a0b64690370a0dd9b316c8e1b7c59a8d 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 151 1.3E-11 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XFC3_01165 a0b64690370a0dd9b316c8e1b7c59a8d 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 1.3E-11 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XFC3_01165 a0b64690370a0dd9b316c8e1b7c59a8d 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 234 246 1.3E-11 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XFC3_01165 a0b64690370a0dd9b316c8e1b7c59a8d 417 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 398 43.091 T 11-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 XFC3_01165 a0b64690370a0dd9b316c8e1b7c59a8d 417 SUPERFAMILY SSF53784 6 415 6.54E-101 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XFC3_01165 a0b64690370a0dd9b316c8e1b7c59a8d 417 Gene3D G3DSA:3.40.50.460 139 385 5.9E-139 T 11-10-2018 XFC3_01165 a0b64690370a0dd9b316c8e1b7c59a8d 417 PIRSF PIRSF036483 2 417 3.9E-218 T 11-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 XFC3_01165 a0b64690370a0dd9b316c8e1b7c59a8d 417 Pfam PF00365 Phosphofructokinase 10 321 2.4E-49 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XFC3_01165 a0b64690370a0dd9b316c8e1b7c59a8d 417 Gene3D G3DSA:3.40.50.450 6 398 5.9E-139 T 11-10-2018 XFC3_09200 bd16ae65fc17f8c5967d00d90e1648aa 652 Gene3D G3DSA:3.30.870.10 473 560 3.1E-10 T 11-10-2018 XFC3_09200 bd16ae65fc17f8c5967d00d90e1648aa 652 Gene3D G3DSA:3.30.870.10 304 414 1.6E-7 T 11-10-2018 XFC3_09200 bd16ae65fc17f8c5967d00d90e1648aa 652 SMART SM00155 186 213 0.018 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XFC3_09200 bd16ae65fc17f8c5967d00d90e1648aa 652 SMART SM00155 497 524 0.37 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XFC3_09200 bd16ae65fc17f8c5967d00d90e1648aa 652 Gene3D G3DSA:3.30.870.10 74 258 3.2E-38 T 11-10-2018 XFC3_09200 bd16ae65fc17f8c5967d00d90e1648aa 652 Pfam PF13091 PLD-like domain 90 245 3.0E-17 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XFC3_09200 bd16ae65fc17f8c5967d00d90e1648aa 652 Pfam PF13091 PLD-like domain 336 548 4.9E-12 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XFC3_09200 bd16ae65fc17f8c5967d00d90e1648aa 652 SUPERFAMILY SSF56024 44 258 1.08E-37 T 11-10-2018 XFC3_09200 bd16ae65fc17f8c5967d00d90e1648aa 652 SUPERFAMILY SSF56024 313 565 5.1E-26 T 11-10-2018 XFC3_00325 35abb390c929d6c5f5f4b2f02167f407 320 Gene3D G3DSA:2.60.40.1090 173 320 1.2E-29 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XFC3_00325 35abb390c929d6c5f5f4b2f02167f407 320 SUPERFAMILY SSF49401 168 320 2.78E-25 T 11-10-2018 IPR008966 Adhesion domain superfamily XFC3_00325 35abb390c929d6c5f5f4b2f02167f407 320 Pfam PF00419 Fimbrial protein 161 320 9.8E-16 T 11-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 XFC3_00325 35abb390c929d6c5f5f4b2f02167f407 320 Gene3D G3DSA:2.60.40.3310 8 172 9.0E-35 T 11-10-2018 XFC3_05870 01cad4b988816b3a3b5a162aeb005ab9 206 Pfam PF02498 BRO family, N-terminal domain 17 108 1.8E-7 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_05870 01cad4b988816b3a3b5a162aeb005ab9 206 SMART SM01040 14 107 3.0E-18 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_07005 051fe81deae6e35a05b7509fb3e55887 264 Pfam PF00899 ThiF family 22 161 1.4E-28 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 XFC3_07005 051fe81deae6e35a05b7509fb3e55887 264 Gene3D G3DSA:3.40.50.720 1 252 1.3E-76 T 11-10-2018 XFC3_07005 051fe81deae6e35a05b7509fb3e55887 264 SUPERFAMILY SSF69572 8 210 1.15E-48 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 XFC3_10985 c7c23e01687f474d914949955b5d07b1 264 Hamap MF_00443 Thiazole synthase [thiG]. 9 264 42.354 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 XFC3_10985 c7c23e01687f474d914949955b5d07b1 264 Pfam PF05690 Thiazole biosynthesis protein ThiG 12 258 8.5E-110 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 XFC3_10985 c7c23e01687f474d914949955b5d07b1 264 Gene3D G3DSA:3.20.20.70 2 264 1.2E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_10985 c7c23e01687f474d914949955b5d07b1 264 SUPERFAMILY SSF110399 8 250 7.72E-88 T 11-10-2018 XFC3_04115 98e5af636df17b17c3ec776ec07ab9d5 828 SUPERFAMILY SSF52540 549 675 7.44E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_04115 98e5af636df17b17c3ec776ec07ab9d5 828 SMART SM00885 362 521 2.9E-33 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XFC3_04115 98e5af636df17b17c3ec776ec07ab9d5 828 Pfam PF08706 D5 N terminal like 362 520 9.9E-26 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XFC3_04115 98e5af636df17b17c3ec776ec07ab9d5 828 Pfam PF03288 Poxvirus D5 protein-like 737 803 9.7E-5 T 11-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal XFC3_04115 98e5af636df17b17c3ec776ec07ab9d5 828 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 470 788 1.2E-70 T 11-10-2018 IPR006500 DNA primase, phage/plasmid XFC3_08080 276cdcc8ae6f001fa50d3ad260d8bcc1 649 SUPERFAMILY SSF53955 477 633 1.47E-48 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_08080 276cdcc8ae6f001fa50d3ad260d8bcc1 649 Gene3D G3DSA:1.25.20.10 27 380 5.4E-79 T 11-10-2018 XFC3_08080 276cdcc8ae6f001fa50d3ad260d8bcc1 649 SUPERFAMILY SSF48435 25 474 2.88E-102 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 XFC3_08080 276cdcc8ae6f001fa50d3ad260d8bcc1 649 Pfam PF01464 Transglycosylase SLT domain 481 594 1.3E-26 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 XFC3_08080 276cdcc8ae6f001fa50d3ad260d8bcc1 649 Gene3D G3DSA:1.10.530.10 471 637 4.7E-49 T 11-10-2018 XFC3_08080 276cdcc8ae6f001fa50d3ad260d8bcc1 649 Pfam PF14718 Soluble lytic murein transglycosylase L domain 402 460 3.5E-9 T 11-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 XFC3_04460 6fe3fcecb54778c6cfb590d62c81b328 255 SUPERFAMILY SSF111331 26 242 1.31E-55 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily XFC3_04460 6fe3fcecb54778c6cfb590d62c81b328 255 Pfam PF01513 ATP-NAD kinase 34 217 5.5E-15 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 XFC3_04460 6fe3fcecb54778c6cfb590d62c81b328 255 Gene3D G3DSA:3.40.50.10330 30 232 2.4E-38 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 XFC3_04460 6fe3fcecb54778c6cfb590d62c81b328 255 Gene3D G3DSA:2.60.200.30 96 230 2.4E-38 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 XFC3_04460 6fe3fcecb54778c6cfb590d62c81b328 255 Hamap MF_00361 NAD kinase [nadK]. 5 254 21.243 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 XFC3_10445 4a17d8cae6f44df87070415e670c965a 297 Gene3D G3DSA:1.10.530.10 158 290 1.6E-41 T 11-10-2018 XFC3_10445 4a17d8cae6f44df87070415e670c965a 297 Pfam PF01464 Transglycosylase SLT domain 172 267 8.2E-27 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 XFC3_10445 4a17d8cae6f44df87070415e670c965a 297 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 187 215 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 XFC3_10445 4a17d8cae6f44df87070415e670c965a 297 SUPERFAMILY SSF53955 161 289 1.47E-44 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_02235 b671948eeff6a8c530b6cd8b313057d1 759 Gene3D G3DSA:2.40.170.20 185 759 4.4E-110 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XFC3_02235 b671948eeff6a8c530b6cd8b313057d1 759 Gene3D G3DSA:2.170.130.10 53 180 9.8E-35 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFC3_02235 b671948eeff6a8c530b6cd8b313057d1 759 SUPERFAMILY SSF56935 33 758 5.76E-112 T 11-10-2018 XFC3_02235 b671948eeff6a8c530b6cd8b313057d1 759 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 758 1.4E-69 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 XFC3_02235 b671948eeff6a8c530b6cd8b313057d1 759 Pfam PF00593 TonB dependent receptor 273 757 2.9E-49 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFC3_02235 b671948eeff6a8c530b6cd8b313057d1 759 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 171 1.1E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFC3_06425 05bd0163b99e7110ed5a07dfa1a35131 346 Pfam PF07859 alpha/beta hydrolase fold 119 320 1.0E-43 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 XFC3_06425 05bd0163b99e7110ed5a07dfa1a35131 346 SUPERFAMILY SSF53474 53 346 4.37E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_06425 05bd0163b99e7110ed5a07dfa1a35131 346 Gene3D G3DSA:3.40.50.1820 25 346 6.0E-79 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_03105 602231451e66bbee7da4a77c73f215ba 184 Gene3D G3DSA:3.40.50.2020 2 184 1.4E-45 T 11-10-2018 XFC3_03105 602231451e66bbee7da4a77c73f215ba 184 Pfam PF00156 Phosphoribosyl transferase domain 16 167 7.8E-23 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XFC3_03105 602231451e66bbee7da4a77c73f215ba 184 SUPERFAMILY SSF53271 6 183 4.06E-45 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like XFC3_03140 c16ea6d5f37f8a028ab469551a995ec3 130 Pfam PF04355 SmpA / OmlA family 29 99 4.5E-22 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 XFC3_03140 c16ea6d5f37f8a028ab469551a995ec3 130 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 118 27.847 T 11-10-2018 IPR026592 Outer membrane protein assembly factor BamE XFC3_03140 c16ea6d5f37f8a028ab469551a995ec3 130 Gene3D G3DSA:3.30.1450.10 35 111 4.2E-28 T 11-10-2018 IPR037873 BamE-like XFC3_04420 83ad4a4789890cac75ae7670d25d68a6 301 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 72 224 4.9E-47 T 11-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 XFC3_04420 83ad4a4789890cac75ae7670d25d68a6 301 SUPERFAMILY SSF51197 92 230 2.09E-20 T 11-10-2018 XFC3_04420 83ad4a4789890cac75ae7670d25d68a6 301 Gene3D G3DSA:2.60.120.330 44 233 3.8E-43 T 11-10-2018 IPR027443 Isopenicillin N synthase-like XFC3_08035 ea4c318dd5a3a2cf4c7b8e3ae477d072 220 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 11 206 3.1E-41 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 XFC3_08035 ea4c318dd5a3a2cf4c7b8e3ae477d072 220 SUPERFAMILY SSF51366 8 209 8.0E-54 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XFC3_08035 ea4c318dd5a3a2cf4c7b8e3ae477d072 220 Gene3D G3DSA:3.20.20.70 6 214 4.9E-58 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_08035 ea4c318dd5a3a2cf4c7b8e3ae477d072 220 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 8 211 35.438 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 XFC3_02195 afce732145eafa58efe9ab2275b12546 240 Gene3D G3DSA:3.90.550.10 1 236 3.2E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_02195 afce732145eafa58efe9ab2275b12546 240 Pfam PF00483 Nucleotidyl transferase 2 118 4.4E-11 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XFC3_02195 afce732145eafa58efe9ab2275b12546 240 SUPERFAMILY SSF53448 1 233 6.31E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_07305 c4aad2f482375cb3a4a22475ba7077da 188 Pfam PF10991 Protein of unknown function (DUF2815) 2 173 3.3E-47 T 11-10-2018 IPR022595 Protein of unknown function DUF2815 XFC3_07305 c4aad2f482375cb3a4a22475ba7077da 188 Gene3D G3DSA:2.40.50.140 1 172 2.2E-48 T 11-10-2018 XFC3_07305 c4aad2f482375cb3a4a22475ba7077da 188 SUPERFAMILY SSF50249 6 169 1.2E-10 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_11445 c4aad2f482375cb3a4a22475ba7077da 188 Pfam PF10991 Protein of unknown function (DUF2815) 2 173 3.3E-47 T 11-10-2018 IPR022595 Protein of unknown function DUF2815 XFC3_11445 c4aad2f482375cb3a4a22475ba7077da 188 Gene3D G3DSA:2.40.50.140 1 172 2.2E-48 T 11-10-2018 XFC3_11445 c4aad2f482375cb3a4a22475ba7077da 188 SUPERFAMILY SSF50249 6 169 1.2E-10 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 635 8.1E-107 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 Pfam PF01578 Cytochrome C assembly protein 89 295 6.8E-48 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 637 8.6E-206 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 356 373 1.8E-44 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.8E-44 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.8E-44 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 399 418 1.8E-44 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 628 641 1.8E-44 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_02650 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 1.8E-44 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFC3_00455 9e5b693cdf0175e0224cbff0d90885f2 136 Gene3D G3DSA:2.30.30.790 3 121 7.0E-13 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_00455 9e5b693cdf0175e0224cbff0d90885f2 136 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_00455 9e5b693cdf0175e0224cbff0d90885f2 136 PIRSF PIRSF002191 1 135 2.7E-49 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_00455 9e5b693cdf0175e0224cbff0d90885f2 136 SUPERFAMILY SSF50104 7 122 5.01E-44 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily XFC3_00455 9e5b693cdf0175e0224cbff0d90885f2 136 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 118 29.074 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_00455 9e5b693cdf0175e0224cbff0d90885f2 136 PRINTS PR00061 Ribosomal protein L19 signature 92 117 1.1E-36 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_00455 9e5b693cdf0175e0224cbff0d90885f2 136 PRINTS PR00061 Ribosomal protein L19 signature 38 67 1.1E-36 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_00455 9e5b693cdf0175e0224cbff0d90885f2 136 PRINTS PR00061 Ribosomal protein L19 signature 8 37 1.1E-36 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_00455 9e5b693cdf0175e0224cbff0d90885f2 136 Pfam PF01245 Ribosomal protein L19 8 116 1.6E-47 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_00455 9e5b693cdf0175e0224cbff0d90885f2 136 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 7 117 2.0E-46 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_06700 a4a814c06e9590cdc058dbb07e681436 473 Gene3D G3DSA:3.50.80.20 84 188 3.6E-19 T 11-10-2018 XFC3_06700 a4a814c06e9590cdc058dbb07e681436 473 SUPERFAMILY SSF56601 30 463 4.11E-82 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFC3_06700 a4a814c06e9590cdc058dbb07e681436 473 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 49 450 2.6E-94 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFC3_06700 a4a814c06e9590cdc058dbb07e681436 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 7.5E-23 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFC3_06700 a4a814c06e9590cdc058dbb07e681436 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 7.5E-23 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFC3_06700 a4a814c06e9590cdc058dbb07e681436 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 427 440 7.5E-23 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFC3_06700 a4a814c06e9590cdc058dbb07e681436 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 288 310 7.5E-23 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFC3_06700 a4a814c06e9590cdc058dbb07e681436 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 60 79 7.5E-23 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFC3_06700 a4a814c06e9590cdc058dbb07e681436 473 Gene3D G3DSA:3.40.710.10 213 468 1.1E-50 T 11-10-2018 XFC3_06700 a4a814c06e9590cdc058dbb07e681436 473 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 20 458 4.3E-102 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFC3_12075 76444f15149b26bcc5b1fd50a084fcd2 89 Gene3D G3DSA:2.20.25.10 8 89 3.3E-31 T 11-10-2018 XFC3_12075 76444f15149b26bcc5b1fd50a084fcd2 89 Pfam PF03966 Trm112p-like protein 2 68 3.7E-9 T 11-10-2018 IPR005651 Trm112-like XFC3_12075 76444f15149b26bcc5b1fd50a084fcd2 89 SUPERFAMILY SSF158997 1 78 7.85E-7 T 11-10-2018 XFC3_12100 0a7da9b6bf265b8f7c9977a8f5bd4fab 535 SUPERFAMILY SSF81296 415 527 5.32E-24 T 11-10-2018 IPR014756 Immunoglobulin E-set XFC3_12100 0a7da9b6bf265b8f7c9977a8f5bd4fab 535 PIRSF PIRSF006281 1 528 1.4E-208 T 11-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD XFC3_12100 0a7da9b6bf265b8f7c9977a8f5bd4fab 535 SUPERFAMILY SSF74650 44 412 8.47E-154 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 XFC3_12100 0a7da9b6bf265b8f7c9977a8f5bd4fab 535 Gene3D G3DSA:2.70.98.10 43 410 2.0E-153 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 XFC3_12100 0a7da9b6bf265b8f7c9977a8f5bd4fab 535 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 44 524 1.1E-191 T 11-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 XFC3_12100 0a7da9b6bf265b8f7c9977a8f5bd4fab 535 Gene3D G3DSA:2.60.40.10 415 534 3.0E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFC3_12100 0a7da9b6bf265b8f7c9977a8f5bd4fab 535 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 534 58.959 T 11-10-2018 IPR023724 Glucan biosynthesis, MdoD XFC3_07665 0fb3e3a685ee7fef8b03272507388155 334 Pfam PF02685 Glucokinase 17 329 1.8E-101 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XFC3_07665 0fb3e3a685ee7fef8b03272507388155 334 SUPERFAMILY SSF53067 15 329 1.61E-49 T 11-10-2018 XFC3_07665 0fb3e3a685ee7fef8b03272507388155 334 Gene3D G3DSA:3.30.420.40 16 325 1.6E-89 T 11-10-2018 XFC3_07665 0fb3e3a685ee7fef8b03272507388155 334 Gene3D G3DSA:3.40.367.20 115 314 1.6E-89 T 11-10-2018 XFC3_00240 acce673a0987da743adcad88ec2f1958 344 Gene3D G3DSA:3.90.1530.30 42 108 4.3E-10 T 11-10-2018 XFC3_00240 acce673a0987da743adcad88ec2f1958 344 SUPERFAMILY SSF110849 31 167 4.53E-25 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily XFC3_00240 acce673a0987da743adcad88ec2f1958 344 SMART SM00470 28 122 5.1E-19 T 11-10-2018 IPR003115 ParB/Sulfiredoxin XFC3_00240 acce673a0987da743adcad88ec2f1958 344 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 27 171 1.1E-27 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 XFC3_00240 acce673a0987da743adcad88ec2f1958 344 Gene3D G3DSA:1.10.10.730 116 169 1.7E-7 T 11-10-2018 XFC3_00240 acce673a0987da743adcad88ec2f1958 344 Pfam PF02195 ParB-like nuclease domain 29 122 4.7E-13 T 11-10-2018 IPR003115 ParB/Sulfiredoxin XFC3_00240 acce673a0987da743adcad88ec2f1958 344 Pfam PF08535 KorB domain 149 232 8.1E-5 T 11-10-2018 IPR013741 Repressor KorB domain XFC3_03910 891ba5f64461b706bc28eaecd8a53bcb 415 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 18 219 24.231 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 XFC3_03910 891ba5f64461b706bc28eaecd8a53bcb 415 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 129 238 1.2E-43 T 11-10-2018 IPR012997 Rare lipoprotein A XFC3_03910 891ba5f64461b706bc28eaecd8a53bcb 415 Pfam PF03330 Lytic transglycolase 128 216 3.3E-23 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain XFC3_03910 891ba5f64461b706bc28eaecd8a53bcb 415 SUPERFAMILY SSF110997 342 408 6.8E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XFC3_03910 891ba5f64461b706bc28eaecd8a53bcb 415 Gene3D G3DSA:2.40.40.10 126 220 5.4E-35 T 11-10-2018 IPR036908 RlpA-like domain superfamily XFC3_03910 891ba5f64461b706bc28eaecd8a53bcb 415 SUPERFAMILY SSF50685 127 217 2.79E-9 T 11-10-2018 IPR036908 RlpA-like domain superfamily XFC3_03910 891ba5f64461b706bc28eaecd8a53bcb 415 Pfam PF05036 Sporulation related domain 343 403 1.1E-7 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 XFC3_04730 a9ca801208296ffadd61354fcbb1f9bc 323 SMART SM00493 171 249 3.2E-4 T 11-10-2018 IPR006171 TOPRIM domain XFC3_04730 a9ca801208296ffadd61354fcbb1f9bc 323 Pfam PF13662 Toprim domain 172 244 1.3E-9 T 11-10-2018 IPR006171 TOPRIM domain XFC3_07550 8d57cfd86d059a6ec9cc257e57e3bace 451 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 46 443 5.8E-95 T 11-10-2018 IPR018721 Protein of unknown function DUF2252 XFC3_04850 c4b4bd431992a4be8037ed9a7f46d0e6 219 Pfam PF11906 Protein of unknown function (DUF3426) 74 218 2.7E-33 T 11-10-2018 IPR021834 Protein of unknown function DUF3426 XFC3_06140 0f57a2a4493a20fc0c6cff2fd6605bba 389 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 19 379 2.6E-46 T 11-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 XFC3_06140 0f57a2a4493a20fc0c6cff2fd6605bba 389 Pfam PF07219 HemY protein N-terminus 33 132 1.6E-15 T 11-10-2018 IPR010817 HemY, N-terminal XFC3_06140 0f57a2a4493a20fc0c6cff2fd6605bba 389 SUPERFAMILY SSF48452 130 383 1.67E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_06325 63deda732a3b6e7ee858eb44a26e7c7f 280 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 12 182 5.9E-6 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 XFC3_06325 63deda732a3b6e7ee858eb44a26e7c7f 280 Gene3D G3DSA:3.40.50.620 4 196 1.7E-23 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_06325 63deda732a3b6e7ee858eb44a26e7c7f 280 SUPERFAMILY SSF52402 9 189 8.37E-14 T 11-10-2018 XFC3_11595 a03fdbdb286048c39f35d999b59ce9fc 229 Pfam PF11218 Protein of unknown function (DUF3011) 32 226 2.5E-90 T 11-10-2018 IPR021381 Protein of unknown function DUF3011 XFC3_08265 ca5b16b75a2e805144ee06a87e69c9a8 507 Gene3D G3DSA:1.25.40.10 54 296 2.1E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_08265 ca5b16b75a2e805144ee06a87e69c9a8 507 SUPERFAMILY SSF48452 176 298 4.75E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_06035 73cbea07f7914b8a586912ea8e76c0c7 64 SUPERFAMILY SSF57829 2 55 3.42E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 XFC3_06035 73cbea07f7914b8a586912ea8e76c0c7 64 Pfam PF01783 Ribosomal L32p protein family 2 55 7.6E-20 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_06035 73cbea07f7914b8a586912ea8e76c0c7 64 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.4E-19 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_06035 73cbea07f7914b8a586912ea8e76c0c7 64 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.135 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_04495 0ba1b268dd8ac9135189fcbce99bb804 268 SUPERFAMILY SSF51735 4 238 2.43E-63 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_04495 0ba1b268dd8ac9135189fcbce99bb804 268 Pfam PF00106 short chain dehydrogenase 5 186 1.1E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_04495 0ba1b268dd8ac9135189fcbce99bb804 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.5E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_04495 0ba1b268dd8ac9135189fcbce99bb804 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.5E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_04495 0ba1b268dd8ac9135189fcbce99bb804 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.5E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_04495 0ba1b268dd8ac9135189fcbce99bb804 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.5E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_04495 0ba1b268dd8ac9135189fcbce99bb804 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.5E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_04495 0ba1b268dd8ac9135189fcbce99bb804 268 Gene3D G3DSA:3.40.50.720 2 250 2.1E-67 T 11-10-2018 XFC3_04495 0ba1b268dd8ac9135189fcbce99bb804 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 1.7E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_04495 0ba1b268dd8ac9135189fcbce99bb804 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.7E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_04495 0ba1b268dd8ac9135189fcbce99bb804 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.7E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 Pfam PF13180 PDZ domain 292 382 8.5E-12 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 SUPERFAMILY SSF50156 290 386 2.89E-21 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 SUPERFAMILY SSF50494 62 287 3.07E-62 T 11-10-2018 IPR009003 Peptidase S1, PA clan XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 3.5E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 242 259 3.5E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 124 136 3.5E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 185 209 3.5E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 220 237 3.5E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 145 165 3.5E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 Gene3D G3DSA:2.40.10.120 62 284 3.8E-79 T 11-10-2018 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 Gene3D G3DSA:2.30.42.10 289 390 1.3E-24 T 11-10-2018 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 Gene3D G3DSA:2.30.42.10 401 481 1.7E-9 T 11-10-2018 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 SMART SM00228 291 373 1.3E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 SMART SM00228 397 473 0.22 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 64 475 4.9E-128 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 SUPERFAMILY SSF50156 406 475 2.5E-8 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFC3_01215 a7ad56a40d706206394decf14c65ed33 481 Pfam PF13365 Trypsin-like peptidase domain 114 249 1.0E-31 T 11-10-2018 XFC3_01195 d84bd00a12d92cf1a05fbe4400875690 371 Pfam PF01594 AI-2E family transporter 36 358 1.4E-43 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like XFC3_12090 cee0a587d0ba8f5c522dd1d3faaa9ae1 452 SUPERFAMILY SSF53474 41 167 8.01E-6 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_12090 cee0a587d0ba8f5c522dd1d3faaa9ae1 452 Gene3D G3DSA:3.40.50.1820 235 450 1.4E-8 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_12090 cee0a587d0ba8f5c522dd1d3faaa9ae1 452 Pfam PF06057 Bacterial virulence protein (VirJ) 263 450 6.7E-82 T 11-10-2018 IPR010333 Bacterial virulence XFC3_12090 cee0a587d0ba8f5c522dd1d3faaa9ae1 452 PIRSF PIRSF029063 1 452 1.4E-177 T 11-10-2018 IPR011225 Type IV secretory pathway, VirJ component XFC3_12090 cee0a587d0ba8f5c522dd1d3faaa9ae1 452 SUPERFAMILY SSF53474 259 448 5.07E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_11270 3572f5ac7e32f2b3f9928df825eabd30 100 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 5 99 1.1E-34 T 11-10-2018 IPR031451 mRNA interferase toxin MqsR GO:0009372|GO:0017148|GO:0044010 XFC3_11270 3572f5ac7e32f2b3f9928df825eabd30 100 Gene3D G3DSA:3.30.2310.40 1 100 8.1E-38 T 11-10-2018 IPR038493 Toxin MqsR superfamily XFC3_08120 0e909d2b3c3ae32e0fef32de630808fe 145 Pfam PF01047 MarR family 38 92 8.6E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_08120 0e909d2b3c3ae32e0fef32de630808fe 145 SMART SM00347 28 128 2.6E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_08120 0e909d2b3c3ae32e0fef32de630808fe 145 SUPERFAMILY SSF46785 10 143 8.37E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_08120 0e909d2b3c3ae32e0fef32de630808fe 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 6.3E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_08120 0e909d2b3c3ae32e0fef32de630808fe 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 6.3E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_08120 0e909d2b3c3ae32e0fef32de630808fe 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 6.3E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_08120 0e909d2b3c3ae32e0fef32de630808fe 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 6.3E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFC3_08120 0e909d2b3c3ae32e0fef32de630808fe 145 Gene3D G3DSA:1.10.10.10 2 143 1.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_02455 5fd3f8cebc3005a9a6efd445f2860a1f 179 Pfam PF00877 NlpC/P60 family 69 176 1.9E-29 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain XFC3_02455 5fd3f8cebc3005a9a6efd445f2860a1f 179 Gene3D G3DSA:3.90.1720.10 29 173 1.6E-41 T 11-10-2018 XFC3_02455 5fd3f8cebc3005a9a6efd445f2860a1f 179 SUPERFAMILY SSF54001 46 178 3.92E-42 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XFC3_02010 75fb35e437f4fbfeffb421cfe7390f3b 187 SUPERFAMILY SSF54523 8 171 5.76E-18 T 11-10-2018 XFC3_02010 75fb35e437f4fbfeffb421cfe7390f3b 187 Pfam PF00114 Pilin (bacterial filament) 36 171 1.2E-25 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XFC3_02010 75fb35e437f4fbfeffb421cfe7390f3b 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.9E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_02010 75fb35e437f4fbfeffb421cfe7390f3b 187 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 26 1.7E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_02860 c9fff63f7bc33a403cb79c7afc1345d4 167 ProSitePatterns PS00855 Signal peptidases II signature. 105 117 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XFC3_02860 c9fff63f7bc33a403cb79c7afc1345d4 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 138 154 1.1E-15 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XFC3_02860 c9fff63f7bc33a403cb79c7afc1345d4 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 1.1E-15 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XFC3_02860 c9fff63f7bc33a403cb79c7afc1345d4 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 1.1E-15 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XFC3_02860 c9fff63f7bc33a403cb79c7afc1345d4 167 TIGRFAM TIGR00077 lspA: signal peptidase II 10 162 8.4E-41 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XFC3_02860 c9fff63f7bc33a403cb79c7afc1345d4 167 Pfam PF01252 Signal peptidase (SPase) II 16 157 4.2E-36 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XFC3_02860 c9fff63f7bc33a403cb79c7afc1345d4 167 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 163 16.258 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XFC3_03905 40eda9058c9de2b26e0143e7d46801eb 202 Pfam PF01694 Rhomboid family 36 184 1.7E-28 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 XFC3_03905 40eda9058c9de2b26e0143e7d46801eb 202 Gene3D G3DSA:1.20.1540.10 1 191 2.3E-27 T 11-10-2018 IPR035952 Rhomboid-like superfamily XFC3_03905 40eda9058c9de2b26e0143e7d46801eb 202 SUPERFAMILY SSF144091 2 185 1.2E-34 T 11-10-2018 XFC3_10720 f8dc32706f2e71dd97dda9367516d5c8 435 Gene3D G3DSA:3.50.50.60 1 72 1.4E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_10720 f8dc32706f2e71dd97dda9367516d5c8 435 SUPERFAMILY SSF51905 1 416 2.98E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_10720 f8dc32706f2e71dd97dda9367516d5c8 435 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 46.206 T 11-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 XFC3_10720 f8dc32706f2e71dd97dda9367516d5c8 435 SUPERFAMILY SSF54373 270 360 3.79E-16 T 11-10-2018 XFC3_10720 f8dc32706f2e71dd97dda9367516d5c8 435 Gene3D G3DSA:3.50.50.60 105 400 6.4E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_10720 f8dc32706f2e71dd97dda9367516d5c8 435 Pfam PF01266 FAD dependent oxidoreductase 3 398 1.6E-69 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 XFC3_10720 f8dc32706f2e71dd97dda9367516d5c8 435 Gene3D G3DSA:3.30.9.10 134 362 6.4E-51 T 11-10-2018 XFC3_07365 7295f2d9d2abb2d9e9051954e1229f92 82 SUPERFAMILY SSF47413 3 55 1.3E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_07365 7295f2d9d2abb2d9e9051954e1229f92 82 Pfam PF01381 Helix-turn-helix 4 54 1.4E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_07365 7295f2d9d2abb2d9e9051954e1229f92 82 Gene3D G3DSA:1.10.260.40 1 82 6.5E-11 T 11-10-2018 XFC3_10085 7295f2d9d2abb2d9e9051954e1229f92 82 SUPERFAMILY SSF47413 3 55 1.3E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_10085 7295f2d9d2abb2d9e9051954e1229f92 82 Pfam PF01381 Helix-turn-helix 4 54 1.4E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_10085 7295f2d9d2abb2d9e9051954e1229f92 82 Gene3D G3DSA:1.10.260.40 1 82 6.5E-11 T 11-10-2018 XFC3_07795 43c9f173c048e8d4041a962a5762084c 454 SUPERFAMILY SSF55931 27 445 8.73E-67 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 XFC3_07795 43c9f173c048e8d4041a962a5762084c 454 Gene3D G3DSA:3.30.590.20 3 454 3.4E-177 T 11-10-2018 XFC3_07795 43c9f173c048e8d4041a962a5762084c 454 PIRSF PIRSF017901 2 454 5.2E-184 T 11-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 XFC3_07795 43c9f173c048e8d4041a962a5762084c 454 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 11 454 5.6E-210 T 11-10-2018 IPR011556 Glutamate--cysteine ligase, plant-type GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 XFC3_07795 43c9f173c048e8d4041a962a5762084c 454 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 56 358 8.8E-94 T 11-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 XFC3_12185 d9aede4050616d41130ec25886700b9f 436 Gene3D G3DSA:2.70.70.10 301 434 6.0E-33 T 11-10-2018 IPR011055 Duplicated hybrid motif XFC3_12185 d9aede4050616d41130ec25886700b9f 436 SUPERFAMILY SSF51261 216 433 1.18E-44 T 11-10-2018 IPR011055 Duplicated hybrid motif XFC3_12185 d9aede4050616d41130ec25886700b9f 436 Pfam PF01551 Peptidase family M23 336 429 4.1E-26 T 11-10-2018 IPR016047 Peptidase M23 XFC3_02605 7fdb1139cbcf2027042c3d1b89b16662 246 SUPERFAMILY SSF53335 18 233 2.5E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_02605 7fdb1139cbcf2027042c3d1b89b16662 246 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 16 239 37.048 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 XFC3_02605 7fdb1139cbcf2027042c3d1b89b16662 246 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 233 1.7E-85 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 XFC3_02605 7fdb1139cbcf2027042c3d1b89b16662 246 Pfam PF13489 Methyltransferase domain 54 207 5.3E-24 T 11-10-2018 XFC3_02605 7fdb1139cbcf2027042c3d1b89b16662 246 Gene3D G3DSA:3.40.50.150 16 238 8.1E-77 T 11-10-2018 XFC3_10165 03ddf252dd4d9feda219424c901e5f51 120 Gene3D G3DSA:3.90.20.10 30 102 1.4E-8 T 11-10-2018 XFC3_09375 96d3e47185ffead0da3bf63cc8e1f10c 284 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 240 266 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 XFC3_09375 96d3e47185ffead0da3bf63cc8e1f10c 284 Pfam PF01148 Cytidylyltransferase family 4 279 6.8E-71 T 11-10-2018 XFC3_00650 09f9d4f76c976d7d99f6771f7ac40f37 271 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 5 265 1.9E-130 T 11-10-2018 IPR017483 Conserved hypothetical protein CHP03034 XFC3_00650 09f9d4f76c976d7d99f6771f7ac40f37 271 Pfam PF11692 Protein of unknown function (DUF3289) 6 265 2.1E-104 T 11-10-2018 IPR017483 Conserved hypothetical protein CHP03034 XFC3_12360 f2bb48c65198ea6f612fa4ecd3ab993e 519 SUPERFAMILY SSF53335 19 518 2.27E-138 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_12360 f2bb48c65198ea6f612fa4ecd3ab993e 519 Gene3D G3DSA:1.20.1260.30 15 148 4.6E-43 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily XFC3_12360 f2bb48c65198ea6f612fa4ecd3ab993e 519 Pfam PF02384 N-6 DNA Methylase 157 478 6.1E-113 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 XFC3_12360 f2bb48c65198ea6f612fa4ecd3ab993e 519 Gene3D G3DSA:3.40.50.150 158 462 1.3E-117 T 11-10-2018 XFC3_12360 f2bb48c65198ea6f612fa4ecd3ab993e 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 181 197 3.0E-20 T 11-10-2018 XFC3_12360 f2bb48c65198ea6f612fa4ecd3ab993e 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 278 290 3.0E-20 T 11-10-2018 XFC3_12360 f2bb48c65198ea6f612fa4ecd3ab993e 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 204 218 3.0E-20 T 11-10-2018 XFC3_12360 f2bb48c65198ea6f612fa4ecd3ab993e 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 312 336 3.0E-20 T 11-10-2018 XFC3_12360 f2bb48c65198ea6f612fa4ecd3ab993e 519 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 281 287 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XFC3_12360 f2bb48c65198ea6f612fa4ecd3ab993e 519 Pfam PF12161 HsdM N-terminal domain 19 135 1.9E-24 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain XFC3_08525 862c6f8dea385e44e0b5b46b9ee62e7c 284 SUPERFAMILY SSF46689 232 280 4.08E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFC3_08525 862c6f8dea385e44e0b5b46b9ee62e7c 284 Pfam PF12833 Helix-turn-helix domain 202 280 1.4E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XFC3_08525 862c6f8dea385e44e0b5b46b9ee62e7c 284 Gene3D G3DSA:1.10.10.60 181 239 1.4E-11 T 11-10-2018 XFC3_08525 862c6f8dea385e44e0b5b46b9ee62e7c 284 Pfam PF12852 Cupin 11 165 5.7E-26 T 11-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain XFC3_08525 862c6f8dea385e44e0b5b46b9ee62e7c 284 SUPERFAMILY SSF46689 179 230 3.94E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFC3_08525 862c6f8dea385e44e0b5b46b9ee62e7c 284 Gene3D G3DSA:1.10.10.60 240 283 2.7E-10 T 11-10-2018 XFC3_08525 862c6f8dea385e44e0b5b46b9ee62e7c 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 233 274 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 XFC3_08525 862c6f8dea385e44e0b5b46b9ee62e7c 284 SMART SM00342 196 278 3.5E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XFC3_06740 404d481ffab0867ef6708e3f00e8ef3c 183 Pfam PF00255 Glutathione peroxidase 27 129 1.2E-32 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFC3_06740 404d481ffab0867ef6708e3f00e8ef3c 183 PRINTS PR01011 Glutathione peroxidase family signature 137 146 6.1E-15 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFC3_06740 404d481ffab0867ef6708e3f00e8ef3c 183 PRINTS PR01011 Glutathione peroxidase family signature 76 92 6.1E-15 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFC3_06740 404d481ffab0867ef6708e3f00e8ef3c 183 PRINTS PR01011 Glutathione peroxidase family signature 41 58 6.1E-15 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFC3_06740 404d481ffab0867ef6708e3f00e8ef3c 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 43 58 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 XFC3_06740 404d481ffab0867ef6708e3f00e8ef3c 183 PIRSF PIRSF000303 2 179 7.1E-56 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFC3_06740 404d481ffab0867ef6708e3f00e8ef3c 183 SUPERFAMILY SSF52833 21 175 1.77E-47 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_06740 404d481ffab0867ef6708e3f00e8ef3c 183 Gene3D G3DSA:3.40.30.10 15 182 5.5E-51 T 11-10-2018 XFC3_07110 c1a8eff02bdb29b68fa1160a883230b3 168 SUPERFAMILY SSF54523 24 127 3.06E-7 T 11-10-2018 XFC3_07110 c1a8eff02bdb29b68fa1160a883230b3 168 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 42 8.9E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_07110 c1a8eff02bdb29b68fa1160a883230b3 168 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 21 41 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_07950 9c9536d28dd477309864c488a51c67e9 164 PIRSF PIRSF002070 1 163 2.3E-36 T 11-10-2018 XFC3_07950 9c9536d28dd477309864c488a51c67e9 164 Pfam PF00436 Single-strand binding protein family 5 108 2.0E-38 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XFC3_07950 9c9536d28dd477309864c488a51c67e9 164 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 35.543 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XFC3_07950 9c9536d28dd477309864c488a51c67e9 164 SUPERFAMILY SSF50249 3 164 2.02E-55 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_07950 9c9536d28dd477309864c488a51c67e9 164 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 164 1.5E-50 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XFC3_07950 9c9536d28dd477309864c488a51c67e9 164 Gene3D G3DSA:2.40.50.140 1 119 2.8E-43 T 11-10-2018 XFC3_08645 11f5730d0f1f3f6ffd84f5f22b387ac8 259 Pfam PF01061 ABC-2 type transporter 15 224 1.3E-35 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 XFC3_08645 11f5730d0f1f3f6ffd84f5f22b387ac8 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 1.2E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XFC3_08645 11f5730d0f1f3f6ffd84f5f22b387ac8 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 64 86 1.2E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XFC3_08645 11f5730d0f1f3f6ffd84f5f22b387ac8 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 108 133 1.2E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XFC3_08645 11f5730d0f1f3f6ffd84f5f22b387ac8 259 PIRSF PIRSF006648 1 259 7.9E-27 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XFC3_03995 a19f9b36d636f3d068cfaf5058075079 216 SUPERFAMILY SSF53335 63 176 2.96E-15 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_03995 a19f9b36d636f3d068cfaf5058075079 216 Gene3D G3DSA:3.40.50.150 32 165 1.7E-8 T 11-10-2018 XFC3_03995 a19f9b36d636f3d068cfaf5058075079 216 PIRSF PIRSF028445 1 216 2.8E-127 T 11-10-2018 IPR016885 Uncharacterised conserved protein UCP028445 XFC3_06435 bd55b64a7cc55d9a88c435bcdb42b292 255 Gene3D G3DSA:3.40.50.720 8 253 9.9E-38 T 11-10-2018 XFC3_06435 bd55b64a7cc55d9a88c435bcdb42b292 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_06435 bd55b64a7cc55d9a88c435bcdb42b292 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_06435 bd55b64a7cc55d9a88c435bcdb42b292 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_06435 bd55b64a7cc55d9a88c435bcdb42b292 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_06435 bd55b64a7cc55d9a88c435bcdb42b292 255 Pfam PF00106 short chain dehydrogenase 14 186 4.5E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_06435 bd55b64a7cc55d9a88c435bcdb42b292 255 SUPERFAMILY SSF51735 13 219 2.09E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_09050 b073d3a463bfde4544b393befc83f05a 179 Gene3D G3DSA:1.10.60.30 102 174 2.7E-24 T 11-10-2018 XFC3_09050 b073d3a463bfde4544b393befc83f05a 179 Pfam PF04751 Protein of unknown function (DUF615) 14 167 1.1E-43 T 11-10-2018 IPR006839 Ribosome-associated, YjgA XFC3_09050 b073d3a463bfde4544b393befc83f05a 179 SUPERFAMILY SSF158710 28 171 6.15E-42 T 11-10-2018 IPR023153 PSPTO4464-like domain superfamily XFC3_09050 b073d3a463bfde4544b393befc83f05a 179 Gene3D G3DSA:1.10.60.30 24 98 1.4E-20 T 11-10-2018 XFC3_09050 b073d3a463bfde4544b393befc83f05a 179 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 3 171 22.078 T 11-10-2018 IPR006839 Ribosome-associated, YjgA XFC3_09050 b073d3a463bfde4544b393befc83f05a 179 PIRSF PIRSF016183 1 175 3.5E-62 T 11-10-2018 IPR006839 Ribosome-associated, YjgA XFC3_09915 948c006557245875bb9af408dc4864d6 160 Pfam PF06995 Phage P2 GpU 33 152 2.9E-39 T 11-10-2018 IPR009734 Myoviridae, GpU XFC3_09915 948c006557245875bb9af408dc4864d6 160 PIRSF PIRSF029208 25 159 7.4E-58 T 11-10-2018 IPR016912 Bacteriophage P2, GpU XFC3_07535 948c006557245875bb9af408dc4864d6 160 Pfam PF06995 Phage P2 GpU 33 152 2.9E-39 T 11-10-2018 IPR009734 Myoviridae, GpU XFC3_07535 948c006557245875bb9af408dc4864d6 160 PIRSF PIRSF029208 25 159 7.4E-58 T 11-10-2018 IPR016912 Bacteriophage P2, GpU XFC3_11190 c120e1debfc929b54d1dc8d0533e9f51 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_11190 c120e1debfc929b54d1dc8d0533e9f51 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.2E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XFC3_11190 c120e1debfc929b54d1dc8d0533e9f51 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.2E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XFC3_11190 c120e1debfc929b54d1dc8d0533e9f51 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.2E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XFC3_11190 c120e1debfc929b54d1dc8d0533e9f51 65 Pfam PF01632 Ribosomal protein L35 2 62 2.4E-24 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_11190 c120e1debfc929b54d1dc8d0533e9f51 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 4.4E-26 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XFC3_11190 c120e1debfc929b54d1dc8d0533e9f51 65 Gene3D G3DSA:2.40.50.530 1 64 9.9E-22 T 11-10-2018 XFC3_11190 c120e1debfc929b54d1dc8d0533e9f51 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.905 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XFC3_11190 c120e1debfc929b54d1dc8d0533e9f51 65 SUPERFAMILY SSF143034 2 64 1.07E-22 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_10665 c780c1fc9151f83a644a3e2b46542fd9 300 SUPERFAMILY SSF160240 220 287 5.49E-8 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 XFC3_10665 c780c1fc9151f83a644a3e2b46542fd9 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 289 2.6E-85 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 XFC3_10665 c780c1fc9151f83a644a3e2b46542fd9 300 Pfam PF01545 Cation efflux family 19 209 5.4E-49 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 XFC3_10665 c780c1fc9151f83a644a3e2b46542fd9 300 Gene3D G3DSA:1.20.1510.10 15 209 4.4E-49 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily XFC3_10665 c780c1fc9151f83a644a3e2b46542fd9 300 SUPERFAMILY SSF161111 15 210 9.02E-59 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily XFC3_09210 059bdc2524f0c31bdce729df80ce0eb4 158 SMART SM00855 3 114 2.1E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XFC3_09210 059bdc2524f0c31bdce729df80ce0eb4 158 Gene3D G3DSA:3.40.50.1240 1 158 8.9E-38 T 11-10-2018 IPR029033 Histidine phosphatase superfamily XFC3_09210 059bdc2524f0c31bdce729df80ce0eb4 158 SUPERFAMILY SSF53254 1 141 1.19E-26 T 11-10-2018 IPR029033 Histidine phosphatase superfamily XFC3_09210 059bdc2524f0c31bdce729df80ce0eb4 158 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 92 1.1E-12 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XFC3_06730 e63b13566a10468ddebc14ddb9681836 450 PIRSF PIRSF500134 1 447 2.0E-186 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 XFC3_06730 e63b13566a10468ddebc14ddb9681836 450 SMART SM00984 325 429 3.3E-49 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFC3_06730 e63b13566a10468ddebc14ddb9681836 450 SUPERFAMILY SSF52413 319 440 2.62E-38 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 XFC3_06730 e63b13566a10468ddebc14ddb9681836 450 SUPERFAMILY SSF48179 204 301 5.27E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XFC3_06730 e63b13566a10468ddebc14ddb9681836 450 Gene3D G3DSA:3.40.50.720 235 450 1.4E-75 T 11-10-2018 XFC3_06730 e63b13566a10468ddebc14ddb9681836 450 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 425 7.7E-137 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XFC3_06730 e63b13566a10468ddebc14ddb9681836 450 Gene3D G3DSA:1.20.5.100 203 233 5.1E-18 T 11-10-2018 XFC3_06730 e63b13566a10468ddebc14ddb9681836 450 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 429 4.7E-31 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFC3_06730 e63b13566a10468ddebc14ddb9681836 450 Gene3D G3DSA:3.40.50.720 1 202 1.1E-78 T 11-10-2018 XFC3_06730 e63b13566a10468ddebc14ddb9681836 450 PIRSF PIRSF000124 1 444 1.6E-150 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XFC3_06730 e63b13566a10468ddebc14ddb9681836 450 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 5.1E-38 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFC3_06730 e63b13566a10468ddebc14ddb9681836 450 SUPERFAMILY SSF51735 1 195 2.63E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_06730 e63b13566a10468ddebc14ddb9681836 450 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 1.9E-68 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFC3_02960 9b1cac200419c614e9c40b7df00a1273 258 SUPERFAMILY SSF88713 65 254 1.26E-50 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XFC3_02960 9b1cac200419c614e9c40b7df00a1273 258 Pfam PF01522 Polysaccharide deacetylase 73 193 2.7E-28 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XFC3_02960 9b1cac200419c614e9c40b7df00a1273 258 Gene3D G3DSA:3.20.20.370 62 257 2.0E-46 T 11-10-2018 XFC3_06705 7c2867d23511b03b3851b990ee743669 401 Gene3D G3DSA:1.50.10.10 9 401 1.2E-167 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 XFC3_06705 7c2867d23511b03b3851b990ee743669 401 SUPERFAMILY SSF48208 11 395 6.24E-115 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 XFC3_06705 7c2867d23511b03b3851b990ee743669 401 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 39 389 1.5E-117 T 11-10-2018 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 Pfam PF01341 Glycosyl hydrolases family 6 44 395 1.9E-98 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 SMART SM00637 584 664 2.6E-20 T 11-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 Pfam PF00553 Cellulose binding domain 587 664 7.2E-15 T 11-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 SUPERFAMILY SSF51989 21 443 1.03E-115 T 11-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 Gene3D G3DSA:3.20.20.40 20 443 1.9E-156 T 11-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 PRINTS PR00733 Glycosyl hydrolase family 6 signature 349 369 5.6E-34 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 PRINTS PR00733 Glycosyl hydrolase family 6 signature 104 117 5.6E-34 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 PRINTS PR00733 Glycosyl hydrolase family 6 signature 309 322 5.6E-34 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 PRINTS PR00733 Glycosyl hydrolase family 6 signature 372 386 5.6E-34 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 PRINTS PR00733 Glycosyl hydrolase family 6 signature 138 153 5.6E-34 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 PRINTS PR00733 Glycosyl hydrolase family 6 signature 245 255 5.6E-34 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 PRINTS PR00733 Glycosyl hydrolase family 6 signature 205 218 5.6E-34 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 PRINTS PR00733 Glycosyl hydrolase family 6 signature 50 69 5.6E-34 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 SUPERFAMILY SSF49384 580 665 8.37E-20 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 XFC3_08475 1f6befa83965fccc6fc189acc2184dc3 665 Gene3D G3DSA:2.60.40.290 579 665 3.6E-18 T 11-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 XFC3_11080 14b3db870b1fe31084d97d840a7262f9 135 Pfam PF04143 Sulphur transport 4 124 1.5E-9 T 11-10-2018 IPR007272 Sulphur transport domain XFC3_07850 4966b5fbe86b208a55f32bd6031ebb6f 100 Gene3D G3DSA:1.10.238.10 37 72 2.5E-5 T 11-10-2018 XFC3_07850 4966b5fbe86b208a55f32bd6031ebb6f 100 SUPERFAMILY SSF47473 41 80 4.56E-5 T 11-10-2018 IPR011992 EF-hand domain pair XFC3_04075 f097c84a2054b28141d9f3004df014e8 677 Pfam PF16510 Phage P22-like portal protein 31 634 3.8E-75 T 11-10-2018 IPR032427 Phage P22-like portal protein XFC3_12535 802968a1568272730ddb48f72ca71943 127 SUPERFAMILY SSF160472 1 119 6.15E-36 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_12535 802968a1568272730ddb48f72ca71943 127 Gene3D G3DSA:1.10.3510.10 2 126 1.2E-15 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_12535 802968a1568272730ddb48f72ca71943 127 Pfam PF04591 Protein of unknown function, DUF596 56 118 1.3E-25 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFC3_10250 70be1beb0eb2645a62f6c0ec90596393 377 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 204 37.212 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFC3_10250 70be1beb0eb2645a62f6c0ec90596393 377 Gene3D G3DSA:3.90.870.10 1 207 4.7E-84 T 11-10-2018 XFC3_10250 70be1beb0eb2645a62f6c0ec90596393 377 SUPERFAMILY SSF142695 205 365 5.1E-37 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XFC3_10250 70be1beb0eb2645a62f6c0ec90596393 377 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 10 200 1.3E-68 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFC3_10250 70be1beb0eb2645a62f6c0ec90596393 377 PIRSF PIRSF001259 2 370 6.6E-109 T 11-10-2018 XFC3_10250 70be1beb0eb2645a62f6c0ec90596393 377 Pfam PF00925 GTP cyclohydrolase II 209 363 1.6E-25 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XFC3_10250 70be1beb0eb2645a62f6c0ec90596393 377 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 11 199 1.9E-81 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFC3_10250 70be1beb0eb2645a62f6c0ec90596393 377 SUPERFAMILY SSF55821 6 203 4.35E-82 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XFC3_00175 19bc98d55df49d8fa185b0aa84824001 293 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 279 36.897 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 XFC3_00175 19bc98d55df49d8fa185b0aa84824001 293 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 289 9.2E-104 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 XFC3_00175 19bc98d55df49d8fa185b0aa84824001 293 Gene3D G3DSA:3.40.50.150 1 293 3.0E-94 T 11-10-2018 XFC3_00175 19bc98d55df49d8fa185b0aa84824001 293 SUPERFAMILY SSF53335 8 289 2.22E-74 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_05310 174f78466681d75840bf43f4494810a2 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 XFC3_05310 174f78466681d75840bf43f4494810a2 249 SUPERFAMILY SSF53254 1 246 7.07E-74 T 11-10-2018 IPR029033 Histidine phosphatase superfamily XFC3_05310 174f78466681d75840bf43f4494810a2 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 229 43.887 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 XFC3_05310 174f78466681d75840bf43f4494810a2 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 247 1.4E-125 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 XFC3_05310 174f78466681d75840bf43f4494810a2 249 SMART SM00855 4 190 2.6E-23 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XFC3_05310 174f78466681d75840bf43f4494810a2 249 Gene3D G3DSA:3.40.50.1240 2 249 1.7E-81 T 11-10-2018 IPR029033 Histidine phosphatase superfamily XFC3_05310 174f78466681d75840bf43f4494810a2 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 128 2.1E-26 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XFC3_05310 174f78466681d75840bf43f4494810a2 249 PIRSF PIRSF000709 1 112 6.8E-7 T 11-10-2018 XFC3_05310 174f78466681d75840bf43f4494810a2 249 PIRSF PIRSF000709 172 243 0.017 T 11-10-2018 XFC3_06475 820f2ad6e9cc8939d3669897b6cae142 192 SUPERFAMILY SSF52218 3 186 1.57E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFC3_06475 820f2ad6e9cc8939d3669897b6cae142 192 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 XFC3_06475 820f2ad6e9cc8939d3669897b6cae142 192 Gene3D G3DSA:3.40.50.360 2 189 3.1E-53 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFC3_06475 820f2ad6e9cc8939d3669897b6cae142 192 Pfam PF03358 NADPH-dependent FMN reductase 47 107 9.3E-11 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 XFC3_09690 8f9feec51ed1b1bc471520bd896c0d14 499 SUPERFAMILY SSF49899 279 473 2.57E-8 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily XFC3_09690 8f9feec51ed1b1bc471520bd896c0d14 499 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 291 447 2.6E-8 T 11-10-2018 XFC3_09690 8f9feec51ed1b1bc471520bd896c0d14 499 Gene3D G3DSA:2.60.120.200 295 483 1.5E-11 T 11-10-2018 XFC3_08240 d1a98119aee9b44ff0642c2aabae5c49 192 Pfam PF00583 Acetyltransferase (GNAT) family 20 128 7.1E-6 T 11-10-2018 IPR000182 GNAT domain XFC3_08240 d1a98119aee9b44ff0642c2aabae5c49 192 PIRSF PIRSF028520 1 164 8.3E-82 T 11-10-2018 IPR016890 Uncharacterised conserved protein UCP028520 XFC3_08240 d1a98119aee9b44ff0642c2aabae5c49 192 SUPERFAMILY SSF55729 1 147 1.06E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFC3_08240 d1a98119aee9b44ff0642c2aabae5c49 192 Gene3D G3DSA:3.40.630.30 2 164 1.0E-14 T 11-10-2018 XFC3_06775 2c82730e2f0b35aac6014bdeb7268f98 97 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 4 91 5.8E-39 T 11-10-2018 IPR014057 Uncharacterized protein HI1420 XFC3_06775 2c82730e2f0b35aac6014bdeb7268f98 97 SUPERFAMILY SSF47413 31 90 3.89E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_08720 0a175e6f9b0e6fd2af4edc49c9d697b5 226 SUPERFAMILY SSF56784 10 221 2.9E-47 T 11-10-2018 IPR036412 HAD-like superfamily XFC3_08720 0a175e6f9b0e6fd2af4edc49c9d697b5 226 Gene3D G3DSA:3.40.50.1000 13 195 6.7E-46 T 11-10-2018 IPR023214 HAD superfamily XFC3_08720 0a175e6f9b0e6fd2af4edc49c9d697b5 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 191 5.9E-14 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFC3_08720 0a175e6f9b0e6fd2af4edc49c9d697b5 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 5.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFC3_08720 0a175e6f9b0e6fd2af4edc49c9d697b5 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 5.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFC3_08720 0a175e6f9b0e6fd2af4edc49c9d697b5 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 5.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFC3_08720 0a175e6f9b0e6fd2af4edc49c9d697b5 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 5.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFC3_08720 0a175e6f9b0e6fd2af4edc49c9d697b5 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 191 4.9E-25 T 11-10-2018 XFC3_08720 0a175e6f9b0e6fd2af4edc49c9d697b5 226 Gene3D G3DSA:1.10.150.240 26 91 6.7E-46 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XFC3_08375 521469ac6370bc3f3676eb696889ea60 180 SMART SM00463 94 178 1.9E-17 T 11-10-2018 IPR002625 Smr domain XFC3_08375 521469ac6370bc3f3676eb696889ea60 180 SUPERFAMILY SSF160443 95 177 7.32E-17 T 11-10-2018 IPR036063 Smr domain superfamily XFC3_08375 521469ac6370bc3f3676eb696889ea60 180 Pfam PF01713 Smr domain 97 177 9.8E-21 T 11-10-2018 IPR002625 Smr domain XFC3_08375 521469ac6370bc3f3676eb696889ea60 180 Gene3D G3DSA:3.30.1370.110 49 180 1.8E-37 T 11-10-2018 XFC3_08915 5145fc6c6baa8b44d0fba700c72854e9 65 Gene3D G3DSA:1.10.287.310 1 59 2.6E-23 T 11-10-2018 XFC3_08915 5145fc6c6baa8b44d0fba700c72854e9 65 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08915 5145fc6c6baa8b44d0fba700c72854e9 65 SUPERFAMILY SSF46561 1 59 2.49E-18 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08915 5145fc6c6baa8b44d0fba700c72854e9 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 59 1.6E-25 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08915 5145fc6c6baa8b44d0fba700c72854e9 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.381 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08915 5145fc6c6baa8b44d0fba700c72854e9 65 Pfam PF00831 Ribosomal L29 protein 5 58 2.1E-21 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_10795 ca4698b2fdde532be4545cc492b6550d 327 Gene3D G3DSA:3.40.190.10 167 267 4.1E-63 T 11-10-2018 XFC3_10795 ca4698b2fdde532be4545cc492b6550d 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 5.3E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_10795 ca4698b2fdde532be4545cc492b6550d 327 Gene3D G3DSA:3.40.190.10 92 301 4.1E-63 T 11-10-2018 XFC3_10795 ca4698b2fdde532be4545cc492b6550d 327 SUPERFAMILY SSF46785 1 88 1.5E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_10795 ca4698b2fdde532be4545cc492b6550d 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_10795 ca4698b2fdde532be4545cc492b6550d 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_10795 ca4698b2fdde532be4545cc492b6550d 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_10795 ca4698b2fdde532be4545cc492b6550d 327 Pfam PF03466 LysR substrate binding domain 89 292 5.8E-36 T 11-10-2018 IPR005119 LysR, substrate-binding XFC3_10795 ca4698b2fdde532be4545cc492b6550d 327 Gene3D G3DSA:1.10.10.10 1 86 4.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_10795 ca4698b2fdde532be4545cc492b6550d 327 SUPERFAMILY SSF53850 91 297 2.64E-34 T 11-10-2018 XFC3_04585 6941995ac22822532d7f615e830cff01 1371 Pfam PF13662 Toprim domain 1220 1292 1.0E-8 T 11-10-2018 IPR006171 TOPRIM domain XFC3_04585 6941995ac22822532d7f615e830cff01 1371 SMART SM00493 1219 1297 3.2E-4 T 11-10-2018 IPR006171 TOPRIM domain XFC3_04585 6941995ac22822532d7f615e830cff01 1371 Pfam PF08401 Domain of unknown function (DUF1738) 220 335 2.2E-30 T 11-10-2018 IPR013610 Domain of unknown function DUF1738 XFC3_05275 b2c70aaf8540cd7f7d19328dc2e0a2a4 257 TIGRFAM TIGR02796 tolQ: protein TolQ 36 251 5.6E-86 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 XFC3_05275 b2c70aaf8540cd7f7d19328dc2e0a2a4 257 Pfam PF01618 MotA/TolQ/ExbB proton channel family 109 239 2.0E-37 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel XFC3_05275 b2c70aaf8540cd7f7d19328dc2e0a2a4 257 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 35 256 39.215 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 XFC3_02755 5445bc23c082f74c146c452af025c1ea 223 Gene3D G3DSA:3.40.50.300 2 223 1.7E-72 T 11-10-2018 XFC3_02755 5445bc23c082f74c146c452af025c1ea 223 SUPERFAMILY SSF52540 7 221 5.19E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_02755 5445bc23c082f74c146c452af025c1ea 223 Pfam PF02224 Cytidylate kinase 9 221 9.4E-67 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 XFC3_02755 5445bc23c082f74c146c452af025c1ea 223 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.6E-69 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 XFC3_02755 5445bc23c082f74c146c452af025c1ea 223 Hamap MF_00238 Cytidylate kinase [cmk]. 6 222 30.208 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 XFC3_08660 744c0ee93d5162f36838d0b4827459d9 420 Gene3D G3DSA:1.10.287.470 144 253 3.0E-14 T 11-10-2018 XFC3_08660 744c0ee93d5162f36838d0b4827459d9 420 Gene3D G3DSA:2.40.30.170 300 398 3.0E-14 T 11-10-2018 XFC3_08660 744c0ee93d5162f36838d0b4827459d9 420 Pfam PF13437 HlyD family secretion protein 264 388 1.2E-14 T 11-10-2018 XFC3_08660 744c0ee93d5162f36838d0b4827459d9 420 Gene3D G3DSA:2.40.50.100 264 299 3.0E-14 T 11-10-2018 XFC3_08660 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 332 2.7E-18 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFC3_08660 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 79 99 2.7E-18 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFC3_08660 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 385 400 2.7E-18 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFC3_08660 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 332 355 2.7E-18 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFC3_08660 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 400 420 2.7E-18 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFC3_08660 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 275 296 2.7E-18 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFC3_05395 1f7e2d7100584a15100d87652fc89f94 442 Gene3D G3DSA:3.40.50.300 2 198 4.4E-29 T 11-10-2018 XFC3_05395 1f7e2d7100584a15100d87652fc89f94 442 Pfam PF05707 Zonular occludens toxin (Zot) 1 200 2.2E-49 T 11-10-2018 IPR008900 Zona occludens toxin XFC3_05460 1f7e2d7100584a15100d87652fc89f94 442 Gene3D G3DSA:3.40.50.300 2 198 4.4E-29 T 11-10-2018 XFC3_05460 1f7e2d7100584a15100d87652fc89f94 442 Pfam PF05707 Zonular occludens toxin (Zot) 1 200 2.2E-49 T 11-10-2018 IPR008900 Zona occludens toxin XFC3_01965 565f775eb4b14ee5ff7d2b815743eb0e 418 Pfam PF16074 Type IV Pilus-assembly protein W 278 413 2.1E-23 T 11-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 XFC3_02415 a70393d465e974c15dd138990a1f6193 380 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 72 77 - T 11-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 XFC3_02415 a70393d465e974c15dd138990a1f6193 380 Pfam PF01555 DNA methylase 68 374 1.9E-44 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XFC3_02415 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 104 124 6.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_02415 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 334 352 6.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_02415 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 67 81 6.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_02415 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 357 377 6.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_02415 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 315 332 6.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFC3_02415 a70393d465e974c15dd138990a1f6193 380 SUPERFAMILY SSF53335 49 375 1.62E-58 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_05045 10f9bceb6bcce76f65784d0138d3be7e 156 SUPERFAMILY SSF50341 5 113 1.83E-9 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 XFC3_05045 10f9bceb6bcce76f65784d0138d3be7e 156 Pfam PF01584 CheW-like domain 11 145 2.5E-10 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XFC3_08045 294d1f45226af5af87f5e3fb460bab22 598 Gene3D G3DSA:1.20.58.2200 549 597 2.0E-12 T 11-10-2018 IPR038440 FimV, C-terminal domain superfamily XFC3_08045 294d1f45226af5af87f5e3fb460bab22 598 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 229 302 5.7E-20 T 11-10-2018 IPR020012 Motility protein FimV, N-terminal XFC3_08045 294d1f45226af5af87f5e3fb460bab22 598 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 555 597 5.3E-15 T 11-10-2018 IPR020011 Motility protein FimV, C-terminal XFC3_08345 783585b25fa18c5d0794a75b5d216c31 276 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_08345 783585b25fa18c5d0794a75b5d216c31 276 SMART SM00382 44 234 4.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_08345 783585b25fa18c5d0794a75b5d216c31 276 SUPERFAMILY SSF52540 20 245 4.62E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_08345 783585b25fa18c5d0794a75b5d216c31 276 Pfam PF00005 ABC transporter 37 186 2.2E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_08345 783585b25fa18c5d0794a75b5d216c31 276 Gene3D G3DSA:3.40.50.300 17 273 1.1E-60 T 11-10-2018 XFC3_03890 059c4aac7a8e0f1169cf06ae6b63febe 368 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 226 314 1.4E-9 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFC3_06405 96428418c3a2a81095ef28c3b3f2d0d2 213 SUPERFAMILY SSF51735 1 200 7.97E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_06405 96428418c3a2a81095ef28c3b3f2d0d2 213 Pfam PF13460 NAD(P)H-binding 8 189 2.0E-48 T 11-10-2018 IPR016040 NAD(P)-binding domain XFC3_06405 96428418c3a2a81095ef28c3b3f2d0d2 213 Gene3D G3DSA:3.40.50.720 1 212 1.2E-55 T 11-10-2018 XFC3_00670 c973e332dc62c0ef40127c3b2c93f820 598 Gene3D G3DSA:3.40.50.300 301 569 1.2E-7 T 11-10-2018 XFC3_00670 c973e332dc62c0ef40127c3b2c93f820 598 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 456 596 4.8E-34 T 11-10-2018 IPR018760 Protein of unknown function DUF2326 XFC3_08460 06ac232682ec2f8c4b06c3614e9ee775 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 4 92 17.454 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 XFC3_08460 06ac232682ec2f8c4b06c3614e9ee775 92 SUPERFAMILY SSF117991 7 92 7.06E-18 T 11-10-2018 IPR027471 YbeD-like domain superfamily XFC3_08460 06ac232682ec2f8c4b06c3614e9ee775 92 Pfam PF04359 Protein of unknown function (DUF493) 11 92 2.3E-19 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 XFC3_08460 06ac232682ec2f8c4b06c3614e9ee775 92 Gene3D G3DSA:3.30.70.260 4 92 2.1E-12 T 11-10-2018 XFC3_01960 52bb2c2fb15d5f12c487691402fdabab 160 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 16 138 1.7E-39 T 11-10-2018 IPR013362 Pilus modification type IV, PilV XFC3_01960 52bb2c2fb15d5f12c487691402fdabab 160 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 36 6.3E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_03855 17094e2f07a6456e471aa285245138aa 125 Gene3D G3DSA:1.10.3510.10 4 123 6.5E-21 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_03855 17094e2f07a6456e471aa285245138aa 125 Pfam PF04591 Protein of unknown function, DUF596 56 125 4.4E-27 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFC3_03855 17094e2f07a6456e471aa285245138aa 125 SUPERFAMILY SSF160472 1 118 7.32E-43 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_10620 2b1e9bff5818940f755d34ef4bde370e 370 SUPERFAMILY SSF53756 3 361 4.11E-71 T 11-10-2018 XFC3_10620 2b1e9bff5818940f755d34ef4bde370e 370 Gene3D G3DSA:3.40.50.2000 171 342 8.0E-34 T 11-10-2018 XFC3_10620 2b1e9bff5818940f755d34ef4bde370e 370 Gene3D G3DSA:3.40.50.2000 1 170 6.2E-16 T 11-10-2018 XFC3_10620 2b1e9bff5818940f755d34ef4bde370e 370 Pfam PF13439 Glycosyltransferase Family 4 13 161 4.9E-19 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XFC3_10620 2b1e9bff5818940f755d34ef4bde370e 370 Pfam PF13692 Glycosyl transferases group 1 185 320 6.2E-21 T 11-10-2018 XFC3_02570 0b80eea8bbb093e39ec7e552b973eb25 95 Gene3D G3DSA:1.10.443.10 3 94 3.2E-9 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFC3_02570 0b80eea8bbb093e39ec7e552b973eb25 95 SUPERFAMILY SSF56349 35 85 2.74E-9 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFC3_02250 1e0d537fa0f3b90957d94a5c98995638 72 Pfam PF04325 Protein of unknown function (DUF465) 20 60 4.4E-9 T 11-10-2018 IPR007420 Protein of unknown function DUF465 XFC3_02250 1e0d537fa0f3b90957d94a5c98995638 72 Gene3D G3DSA:1.20.58.660 1 71 2.9E-6 T 11-10-2018 XFC3_09225 b6c16290cec0e766eb9df72bfe99c423 582 SUPERFAMILY SSF90123 11 324 9.29E-66 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XFC3_09225 b6c16290cec0e766eb9df72bfe99c423 582 Gene3D G3DSA:1.20.1560.10 1 327 4.8E-69 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XFC3_09225 b6c16290cec0e766eb9df72bfe99c423 582 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFC3_09225 b6c16290cec0e766eb9df72bfe99c423 582 Pfam PF00005 ABC transporter 356 506 9.0E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_09225 b6c16290cec0e766eb9df72bfe99c423 582 Gene3D G3DSA:3.40.50.300 328 578 3.0E-88 T 11-10-2018 XFC3_09225 b6c16290cec0e766eb9df72bfe99c423 582 SUPERFAMILY SSF52540 331 577 9.02E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_09225 b6c16290cec0e766eb9df72bfe99c423 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 9 579 9.3E-261 T 11-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 XFC3_09225 b6c16290cec0e766eb9df72bfe99c423 582 SMART SM00382 365 552 4.3E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_09225 b6c16290cec0e766eb9df72bfe99c423 582 Pfam PF00664 ABC transporter transmembrane region 32 290 1.8E-36 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XFC3_10350 209793de0af08b5c486ac105543db33f 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 311 322 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 XFC3_10350 209793de0af08b5c486ac105543db33f 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 427 4.8E-101 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 XFC3_10350 209793de0af08b5c486ac105543db33f 429 Gene3D G3DSA:3.30.70.1170 168 225 7.7E-17 T 11-10-2018 XFC3_10350 209793de0af08b5c486ac105543db33f 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 235 425 3.2E-52 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 XFC3_10350 209793de0af08b5c486ac105543db33f 429 Gene3D G3DSA:1.10.940.10 5 140 7.2E-30 T 11-10-2018 IPR035926 NusB-like superfamily XFC3_10350 209793de0af08b5c486ac105543db33f 429 Gene3D G3DSA:3.40.50.150 226 428 6.8E-58 T 11-10-2018 XFC3_10350 209793de0af08b5c486ac105543db33f 429 SUPERFAMILY SSF48013 7 144 2.13E-25 T 11-10-2018 IPR035926 NusB-like superfamily XFC3_10350 209793de0af08b5c486ac105543db33f 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 312 324 1.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XFC3_10350 209793de0af08b5c486ac105543db33f 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 410 427 1.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XFC3_10350 209793de0af08b5c486ac105543db33f 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 217 231 1.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XFC3_10350 209793de0af08b5c486ac105543db33f 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 246 256 1.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XFC3_10350 209793de0af08b5c486ac105543db33f 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 362 378 1.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XFC3_10350 209793de0af08b5c486ac105543db33f 429 Pfam PF01029 NusB family 8 128 8.2E-17 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 XFC3_10350 209793de0af08b5c486ac105543db33f 429 SUPERFAMILY SSF53335 139 427 8.52E-66 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_05880 be8df3e39736acf4f824b3f302498ebc 148 Pfam PF00436 Single-strand binding protein family 5 108 9.4E-38 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XFC3_05880 be8df3e39736acf4f824b3f302498ebc 148 SUPERFAMILY SSF50249 3 148 2.67E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_05880 be8df3e39736acf4f824b3f302498ebc 148 Gene3D G3DSA:2.40.50.140 1 124 4.5E-43 T 11-10-2018 XFC3_05880 be8df3e39736acf4f824b3f302498ebc 148 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 34.473 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XFC3_05880 be8df3e39736acf4f824b3f302498ebc 148 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 118 1.3E-43 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XFC3_06380 9f8241e699013cb7e365d13005868037 324 Gene3D G3DSA:3.40.190.10 166 268 6.7E-50 T 11-10-2018 XFC3_06380 9f8241e699013cb7e365d13005868037 324 Pfam PF03466 LysR substrate binding domain 90 294 4.0E-33 T 11-10-2018 IPR005119 LysR, substrate-binding XFC3_06380 9f8241e699013cb7e365d13005868037 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 8.4E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_06380 9f8241e699013cb7e365d13005868037 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_06380 9f8241e699013cb7e365d13005868037 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_06380 9f8241e699013cb7e365d13005868037 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFC3_06380 9f8241e699013cb7e365d13005868037 324 SUPERFAMILY SSF53850 90 295 2.17E-39 T 11-10-2018 XFC3_06380 9f8241e699013cb7e365d13005868037 324 Gene3D G3DSA:1.10.10.10 4 93 4.5E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_06380 9f8241e699013cb7e365d13005868037 324 SUPERFAMILY SSF46785 5 90 1.32E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFC3_06380 9f8241e699013cb7e365d13005868037 324 Gene3D G3DSA:3.40.190.10 94 293 6.7E-50 T 11-10-2018 XFC3_12505 da0ee06f689ddfbd369131a0f44b6538 127 SUPERFAMILY SSF160472 1 119 7.06E-39 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_12505 da0ee06f689ddfbd369131a0f44b6538 127 Gene3D G3DSA:1.10.3510.10 3 126 5.2E-16 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_12505 da0ee06f689ddfbd369131a0f44b6538 127 Pfam PF04591 Protein of unknown function, DUF596 56 118 7.1E-26 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFC3_07185 5b713efbc7cdd3e4e386d39279468c67 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 9.9E-78 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 XFC3_07185 5b713efbc7cdd3e4e386d39279468c67 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 1.0E-34 T 11-10-2018 IPR013527 YicC-like, N-terminal XFC3_07185 5b713efbc7cdd3e4e386d39279468c67 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 9.3E-35 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 XFC3_09780 5ec76353b491cbc3644350d82ab8e050 166 SUPERFAMILY SSF53955 5 148 2.2E-47 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_09780 5ec76353b491cbc3644350d82ab8e050 166 Gene3D G3DSA:1.10.530.40 3 154 1.1E-48 T 11-10-2018 XFC3_09780 5ec76353b491cbc3644350d82ab8e050 166 Pfam PF00959 Phage lysozyme 30 137 1.9E-20 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XFC3_00045 b3e8d553130c0332fb6f62827c98cd6e 219 Gene3D G3DSA:3.30.1150.10 125 219 8.5E-27 T 11-10-2018 XFC3_00045 b3e8d553130c0332fb6f62827c98cd6e 219 PRINTS PR01374 Gram-negative bacterial tonB protein signature 65 75 4.4E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XFC3_00045 b3e8d553130c0332fb6f62827c98cd6e 219 PRINTS PR01374 Gram-negative bacterial tonB protein signature 137 158 4.4E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XFC3_00045 b3e8d553130c0332fb6f62827c98cd6e 219 PRINTS PR01374 Gram-negative bacterial tonB protein signature 158 176 4.4E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XFC3_00045 b3e8d553130c0332fb6f62827c98cd6e 219 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 143 219 2.5E-24 T 11-10-2018 IPR006260 TonB/TolA, C-terminal XFC3_00045 b3e8d553130c0332fb6f62827c98cd6e 219 SUPERFAMILY SSF74653 141 217 1.96E-23 T 11-10-2018 XFC3_00045 b3e8d553130c0332fb6f62827c98cd6e 219 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 142 219 6.6E-24 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 XFC3_08960 1b58b754489e7bbe112a0b792a8abde9 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 23.762 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08960 1b58b754489e7bbe112a0b792a8abde9 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.6E-11 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08960 1b58b754489e7bbe112a0b792a8abde9 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.6E-11 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08960 1b58b754489e7bbe112a0b792a8abde9 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.6E-11 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08960 1b58b754489e7bbe112a0b792a8abde9 103 SUPERFAMILY SSF54999 5 102 7.46E-33 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily XFC3_08960 1b58b754489e7bbe112a0b792a8abde9 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.0E-29 T 11-10-2018 IPR027486 Ribosomal protein S10 domain XFC3_08960 1b58b754489e7bbe112a0b792a8abde9 103 Gene3D G3DSA:3.30.70.600 1 103 4.6E-32 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily XFC3_08960 1b58b754489e7bbe112a0b792a8abde9 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 5.9E-40 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08960 1b58b754489e7bbe112a0b792a8abde9 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08960 1b58b754489e7bbe112a0b792a8abde9 103 SMART SM01403 7 101 1.8E-48 T 11-10-2018 IPR027486 Ribosomal protein S10 domain XFC3_06490 d0605e9793639a2b02382b1137616e82 393 SUPERFAMILY SSF103473 14 385 7.59E-43 T 11-10-2018 IPR036259 MFS transporter superfamily XFC3_06490 d0605e9793639a2b02382b1137616e82 393 Pfam PF07690 Major Facilitator Superfamily 19 348 1.5E-31 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XFC3_06490 d0605e9793639a2b02382b1137616e82 393 Gene3D G3DSA:1.20.1250.20 12 385 8.8E-39 T 11-10-2018 XFC3_05410 a21f3ef19ea48552492f84e57e2c1fad 134 Pfam PF12472 Phage related protein 63 120 1.3E-18 T 11-10-2018 IPR021096 Vibrio phage VSK, Orf152 XFC3_05675 0978f8fd30a3229c4ac975bff0112eb6 281 Pfam PF04233 Phage Mu protein F like protein 167 272 2.3E-28 T 11-10-2018 IPR006528 Phage head morphogenesis domain XFC3_05675 0978f8fd30a3229c4ac975bff0112eb6 281 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 173 275 1.1E-21 T 11-10-2018 IPR006528 Phage head morphogenesis domain XFC3_11675 04c5cbb92b3e4e021fbdefab9d8fc022 311 SUPERFAMILY SSF103481 44 144 1.03E-16 T 11-10-2018 XFC3_11675 04c5cbb92b3e4e021fbdefab9d8fc022 311 Pfam PF00892 EamA-like transporter family 152 278 1.3E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XFC3_11675 04c5cbb92b3e4e021fbdefab9d8fc022 311 Pfam PF00892 EamA-like transporter family 11 141 1.0E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XFC3_11675 04c5cbb92b3e4e021fbdefab9d8fc022 311 SUPERFAMILY SSF103481 185 282 1.96E-15 T 11-10-2018 XFC3_03420 c326fec212a2c9347257bde759f4b787 310 Gene3D G3DSA:3.90.1530.30 57 120 7.2E-27 T 11-10-2018 XFC3_03420 c326fec212a2c9347257bde759f4b787 310 SUPERFAMILY SSF110849 44 178 4.45E-32 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily XFC3_03420 c326fec212a2c9347257bde759f4b787 310 Gene3D G3DSA:1.10.10.2830 121 233 1.1E-34 T 11-10-2018 XFC3_03420 c326fec212a2c9347257bde759f4b787 310 SMART SM00470 44 134 1.4E-36 T 11-10-2018 IPR003115 ParB/Sulfiredoxin XFC3_03420 c326fec212a2c9347257bde759f4b787 310 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 42 217 2.7E-57 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 XFC3_03420 c326fec212a2c9347257bde759f4b787 310 Pfam PF02195 ParB-like nuclease domain 47 134 2.7E-28 T 11-10-2018 IPR003115 ParB/Sulfiredoxin XFC3_04290 6804abc9a25e3e0cffbaf54d19ce9eba 74 Pfam PF13986 Domain of unknown function (DUF4224) 15 57 2.2E-16 T 11-10-2018 IPR025319 Domain of unknown function DUF4224 XFC3_01095 2a21c153ffe72bf9859bf49b0b3bd46c 351 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 337 5.1E-152 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 XFC3_01095 2a21c153ffe72bf9859bf49b0b3bd46c 351 Gene3D G3DSA:3.90.25.10 200 330 1.2E-118 T 11-10-2018 XFC3_01095 2a21c153ffe72bf9859bf49b0b3bd46c 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 321 2.1E-88 T 11-10-2018 IPR016040 NAD(P)-binding domain XFC3_01095 2a21c153ffe72bf9859bf49b0b3bd46c 351 Gene3D G3DSA:3.40.50.720 4 322 1.2E-118 T 11-10-2018 XFC3_01095 2a21c153ffe72bf9859bf49b0b3bd46c 351 SUPERFAMILY SSF51735 3 336 1.56E-86 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_12045 671d7e9ed2d619e420ef63e3781cb13c 614 Gene3D G3DSA:3.40.50.300 358 549 2.3E-14 T 11-10-2018 XFC3_12045 671d7e9ed2d619e420ef63e3781cb13c 614 Gene3D G3DSA:3.40.50.300 80 280 1.9E-18 T 11-10-2018 XFC3_12045 671d7e9ed2d619e420ef63e3781cb13c 614 Pfam PF13538 UvrD-like helicase C-terminal domain 470 522 9.3E-12 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain XFC3_12045 671d7e9ed2d619e420ef63e3781cb13c 614 SUPERFAMILY SSF52540 81 527 6.41E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_06855 3690480dcd17dcdc14b853e6adf4ac98 327 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 84 327 8.8E-77 T 11-10-2018 IPR020049 Protein of unknown function DUF2184 XFC3_06855 3690480dcd17dcdc14b853e6adf4ac98 327 PIRSF PIRSF029202 22 327 3.5E-132 T 11-10-2018 IPR020049 Protein of unknown function DUF2184 XFC3_11685 3f3ce5f71a7518b0607e9bccfcdb02fc 421 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 19 408 1.2E-113 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XFC3_11685 3f3ce5f71a7518b0607e9bccfcdb02fc 421 PIRSF PIRSF004640 12 418 8.1E-122 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XFC3_11685 3f3ce5f71a7518b0607e9bccfcdb02fc 421 SUPERFAMILY SSF56014 308 413 3.66E-5 T 11-10-2018 XFC3_11685 3f3ce5f71a7518b0607e9bccfcdb02fc 421 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 17 411 28.35 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XFC3_11685 3f3ce5f71a7518b0607e9bccfcdb02fc 421 Gene3D G3DSA:3.20.20.20 17 302 3.8E-93 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XFC3_11685 3f3ce5f71a7518b0607e9bccfcdb02fc 421 Pfam PF04551 GcpE protein 22 409 2.5E-106 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XFC3_11685 3f3ce5f71a7518b0607e9bccfcdb02fc 421 Gene3D G3DSA:3.30.413.10 303 419 4.7E-36 T 11-10-2018 XFC3_04220 eed920ea9a46991d56b2dba9fcebd4b4 265 Gene3D G3DSA:1.10.8.100 201 264 5.9E-21 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 XFC3_04220 eed920ea9a46991d56b2dba9fcebd4b4 265 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 8 264 53.176 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 XFC3_04220 eed920ea9a46991d56b2dba9fcebd4b4 265 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 40 67 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 XFC3_04220 eed920ea9a46991d56b2dba9fcebd4b4 265 SUPERFAMILY SSF53335 16 262 8.36E-77 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_04220 eed920ea9a46991d56b2dba9fcebd4b4 265 Pfam PF00398 Ribosomal RNA adenine dimethylase 10 262 4.6E-66 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm XFC3_04220 eed920ea9a46991d56b2dba9fcebd4b4 265 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 262 2.6E-82 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 XFC3_04220 eed920ea9a46991d56b2dba9fcebd4b4 265 Gene3D G3DSA:3.40.50.150 5 198 2.3E-64 T 11-10-2018 XFC3_04220 eed920ea9a46991d56b2dba9fcebd4b4 265 SMART SM00650 24 197 6.7E-85 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 XFC3_04805 3dc0539a283be7d81d62e2200c1f13fa 183 ProSitePatterns PS00893 Nudix box signature. 72 93 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XFC3_04805 3dc0539a283be7d81d62e2200c1f13fa 183 SUPERFAMILY SSF55811 15 172 2.84E-28 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XFC3_04805 3dc0539a283be7d81d62e2200c1f13fa 183 Gene3D G3DSA:3.90.79.10 9 180 4.2E-33 T 11-10-2018 XFC3_04805 3dc0539a283be7d81d62e2200c1f13fa 183 Pfam PF00293 NUDIX domain 36 98 1.6E-9 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XFC3_06600 afa5eae73f17ee561e9721cb95ef7017 259 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 35 193 1.4E-24 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XFC3_06600 afa5eae73f17ee561e9721cb95ef7017 259 Gene3D G3DSA:3.40.47.10 7 208 1.2E-6 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_06600 afa5eae73f17ee561e9721cb95ef7017 259 SUPERFAMILY SSF53901 33 190 5.4E-13 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFC3_05325 72430e0f42458e143784a8df9930d74e 168 Pfam PF00255 Glutathione peroxidase 4 111 9.1E-39 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFC3_05325 72430e0f42458e143784a8df9930d74e 168 PRINTS PR01011 Glutathione peroxidase family signature 57 73 9.0E-19 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFC3_05325 72430e0f42458e143784a8df9930d74e 168 PRINTS PR01011 Glutathione peroxidase family signature 22 39 9.0E-19 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFC3_05325 72430e0f42458e143784a8df9930d74e 168 PRINTS PR01011 Glutathione peroxidase family signature 123 132 9.0E-19 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFC3_05325 72430e0f42458e143784a8df9930d74e 168 PIRSF PIRSF000303 1 162 2.2E-63 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFC3_05325 72430e0f42458e143784a8df9930d74e 168 Gene3D G3DSA:3.40.30.10 1 162 5.1E-63 T 11-10-2018 XFC3_05325 72430e0f42458e143784a8df9930d74e 168 SUPERFAMILY SSF52833 3 159 1.36E-59 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_05325 72430e0f42458e143784a8df9930d74e 168 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 XFC3_10960 e9ceb9810ce18676bc8bddf35575e1d9 328 SUPERFAMILY SSF81799 123 227 4.45E-33 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 XFC3_10960 e9ceb9810ce18676bc8bddf35575e1d9 328 PIRSF PIRSF004486 13 322 3.4E-95 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XFC3_10960 e9ceb9810ce18676bc8bddf35575e1d9 328 SUPERFAMILY SSF53335 18 321 2.37E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_10960 e9ceb9810ce18676bc8bddf35575e1d9 328 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 16 320 5.0E-99 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XFC3_10960 e9ceb9810ce18676bc8bddf35575e1d9 328 Gene3D G3DSA:3.40.50.150 21 320 9.4E-95 T 11-10-2018 XFC3_10960 e9ceb9810ce18676bc8bddf35575e1d9 328 Pfam PF01795 MraW methylase family 16 320 8.3E-97 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XFC3_10960 e9ceb9810ce18676bc8bddf35575e1d9 328 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 18 321 36.815 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XFC3_10960 e9ceb9810ce18676bc8bddf35575e1d9 328 Gene3D G3DSA:1.10.150.170 121 228 9.4E-95 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 XFC3_11680 cb28fcf970d8bfda39499b91b80dabd6 227 Pfam PF01569 PAP2 superfamily 110 218 6.7E-18 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XFC3_11680 cb28fcf970d8bfda39499b91b80dabd6 227 SUPERFAMILY SSF48317 19 221 8.37E-35 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XFC3_11680 cb28fcf970d8bfda39499b91b80dabd6 227 Gene3D G3DSA:1.20.144.10 135 227 9.8E-19 T 11-10-2018 XFC3_11680 cb28fcf970d8bfda39499b91b80dabd6 227 Gene3D G3DSA:1.20.144.10 20 134 2.4E-6 T 11-10-2018 XFC3_11680 cb28fcf970d8bfda39499b91b80dabd6 227 SMART SM00014 104 213 4.3E-13 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XFC3_06365 37a56c27583451bd409d42fc42367b0c 209 Pfam PF08808 RES domain 28 179 1.3E-20 T 11-10-2018 IPR014914 RES domain XFC3_06365 37a56c27583451bd409d42fc42367b0c 209 SMART SM00953 27 174 1.3E-13 T 11-10-2018 IPR014914 RES domain XFC3_05080 4e41b74331fcdfac15f9075dfffe12cd 130 SMART SM00411 33 130 7.5E-5 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_05080 4e41b74331fcdfac15f9075dfffe12cd 130 Gene3D G3DSA:4.10.520.10 32 130 1.3E-13 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFC3_05080 4e41b74331fcdfac15f9075dfffe12cd 130 Pfam PF00216 Bacterial DNA-binding protein 34 128 1.6E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFC3_05080 4e41b74331fcdfac15f9075dfffe12cd 130 SUPERFAMILY SSF47729 33 128 3.39E-14 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFC3_06915 d839dac22de56b57e4a8a401630f01bd 88 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 81 1.0E-21 T 11-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system XFC3_06915 d839dac22de56b57e4a8a401630f01bd 88 Gene3D G3DSA:3.10.450.530 1 83 5.5E-15 T 11-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily XFC3_06660 ed411d6e84406a3f0fe59a2dabf71556 341 Pfam PF06580 Histidine kinase 153 231 7.8E-21 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 XFC3_06660 ed411d6e84406a3f0fe59a2dabf71556 341 SUPERFAMILY SSF55874 208 291 9.68E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFC3_09370 f73912eb903d479ab987a15866c42ea7 255 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 12 239 5.2E-84 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 XFC3_09370 f73912eb903d479ab987a15866c42ea7 255 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 239 8.7E-79 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 XFC3_09370 f73912eb903d479ab987a15866c42ea7 255 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 240 39.292 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 XFC3_09370 f73912eb903d479ab987a15866c42ea7 255 SUPERFAMILY SSF64005 11 235 2.75E-85 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 XFC3_09370 f73912eb903d479ab987a15866c42ea7 255 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 185 202 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 XFC3_09370 f73912eb903d479ab987a15866c42ea7 255 Gene3D G3DSA:3.40.1180.10 2 234 6.8E-91 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 XFC3_02365 118a0bca65b16be750b251ebcb8706f3 81 SUPERFAMILY SSF46955 11 73 3.48E-7 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFC3_02365 118a0bca65b16be750b251ebcb8706f3 81 Pfam PF12728 Helix-turn-helix domain 11 63 2.1E-7 T 11-10-2018 XFC3_07765 cbb9cbc98a091aaf8448f2f8aafbfdc9 255 SUPERFAMILY SSF56219 8 251 6.41E-31 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XFC3_07765 cbb9cbc98a091aaf8448f2f8aafbfdc9 255 Gene3D G3DSA:3.60.10.10 7 252 8.1E-35 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XFC3_07765 cbb9cbc98a091aaf8448f2f8aafbfdc9 255 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 12 240 4.5E-11 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase XFC3_01600 85008008d355564bb66f58b56a9c0fc2 63 ProSitePatterns PS00202 Rubredoxin signature. 41 51 - T 11-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 XFC3_01600 85008008d355564bb66f58b56a9c0fc2 63 SUPERFAMILY SSF57802 7 60 9.09E-21 T 11-10-2018 XFC3_01600 85008008d355564bb66f58b56a9c0fc2 63 Pfam PF00301 Rubredoxin 12 57 1.8E-19 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 XFC3_01600 85008008d355564bb66f58b56a9c0fc2 63 PRINTS PR00163 Rubredoxin signature 41 57 4.3E-6 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 XFC3_01600 85008008d355564bb66f58b56a9c0fc2 63 PRINTS PR00163 Rubredoxin signature 11 27 4.3E-6 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 XFC3_01600 85008008d355564bb66f58b56a9c0fc2 63 Gene3D G3DSA:2.20.28.10 3 62 6.1E-25 T 11-10-2018 XFC3_10290 be1161f8e3873f601c3cc3c480d33752 152 Pfam PF04134 Protein of unknown function, DUF393 26 135 3.5E-32 T 11-10-2018 IPR007263 Protein of unknown function DUF393 XFC3_09180 2dc6af70ecc86ebfec923cb2787f84d7 191 Gene3D G3DSA:1.20.144.10 127 191 1.0E-5 T 11-10-2018 XFC3_09180 2dc6af70ecc86ebfec923cb2787f84d7 191 SUPERFAMILY SSF48317 133 186 2.49E-6 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XFC3_02165 741d866cd00605a732e8abe4a65fc5f2 285 Pfam PF11306 Protein of unknown function (DUF3108) 52 266 2.5E-22 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 XFC3_01390 b89fea7ce2e5896e6af57afd97348401 246 Gene3D G3DSA:3.40.50.720 1 246 1.7E-73 T 11-10-2018 XFC3_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.8E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.8E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.8E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_01390 b89fea7ce2e5896e6af57afd97348401 246 SUPERFAMILY SSF51735 4 244 3.41E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFC3_01390 b89fea7ce2e5896e6af57afd97348401 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 243 2.0E-54 T 11-10-2018 XFC3_01390 b89fea7ce2e5896e6af57afd97348401 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 3.5E-98 T 11-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 XFC3_01390 b89fea7ce2e5896e6af57afd97348401 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XFC3_11995 bbe01f07bf28b1e965f84fb415cd6e7c 216 Gene3D G3DSA:2.50.20.10 41 212 7.5E-35 T 11-10-2018 XFC3_11995 bbe01f07bf28b1e965f84fb415cd6e7c 216 Pfam PF03550 Outer membrane lipoprotein LolB 60 211 4.0E-34 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 XFC3_11995 bbe01f07bf28b1e965f84fb415cd6e7c 216 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 17 211 7.3E-18 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 XFC3_11995 bbe01f07bf28b1e965f84fb415cd6e7c 216 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 10 213 22.648 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 XFC3_11995 bbe01f07bf28b1e965f84fb415cd6e7c 216 SUPERFAMILY SSF89392 42 212 3.41E-37 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX XFC3_03970 7d5a5bbec284ec2bf762686829272b6c 178 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XFC3_03970 7d5a5bbec284ec2bf762686829272b6c 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.243 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XFC3_03970 7d5a5bbec284ec2bf762686829272b6c 178 Gene3D G3DSA:3.90.80.10 1 175 1.1E-69 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XFC3_03970 7d5a5bbec284ec2bf762686829272b6c 178 SUPERFAMILY SSF50324 6 175 9.29E-68 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XFC3_03970 7d5a5bbec284ec2bf762686829272b6c 178 Pfam PF00719 Inorganic pyrophosphatase 18 174 9.7E-54 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XFC3_04425 fd5d7b82e29f5515f2dd4f635d6fc732 295 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 5 265 29.706 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 XFC3_04425 fd5d7b82e29f5515f2dd4f635d6fc732 295 SUPERFAMILY SSF53335 10 206 3.35E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_04425 fd5d7b82e29f5515f2dd4f635d6fc732 295 Gene3D G3DSA:3.40.50.150 11 172 1.0E-31 T 11-10-2018 XFC3_04425 fd5d7b82e29f5515f2dd4f635d6fc732 295 Pfam PF08241 Methyltransferase domain 51 147 3.1E-19 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 XFC3_04425 fd5d7b82e29f5515f2dd4f635d6fc732 295 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 13 264 7.5E-68 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 XFC3_00445 7afc178bf5ed48e1938e9abfd562f251 170 Pfam PF01782 RimM N-terminal domain 10 92 1.4E-21 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 XFC3_00445 7afc178bf5ed48e1938e9abfd562f251 170 Gene3D G3DSA:2.30.30.240 97 170 1.4E-26 T 11-10-2018 XFC3_00445 7afc178bf5ed48e1938e9abfd562f251 170 SUPERFAMILY SSF50447 8 95 9.89E-19 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFC3_00445 7afc178bf5ed48e1938e9abfd562f251 170 Gene3D G3DSA:2.40.30.60 1 95 3.6E-24 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 XFC3_00445 7afc178bf5ed48e1938e9abfd562f251 170 SUPERFAMILY SSF50346 101 170 4.12E-18 T 11-10-2018 IPR011033 PRC-barrel-like superfamily XFC3_00445 7afc178bf5ed48e1938e9abfd562f251 170 Pfam PF05239 PRC-barrel domain 98 165 5.7E-6 T 11-10-2018 IPR027275 PRC-barrel domain XFC3_00445 7afc178bf5ed48e1938e9abfd562f251 170 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 169 5.3E-48 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 XFC3_00445 7afc178bf5ed48e1938e9abfd562f251 170 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 170 24.001 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 XFC3_07190 7ec8429336b39a8f1d204f53d52b7ae2 204 Gene3D G3DSA:3.30.63.10 34 93 6.9E-64 T 11-10-2018 XFC3_07190 7ec8429336b39a8f1d204f53d52b7ae2 204 SUPERFAMILY SSF52540 2 188 3.52E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_07190 7ec8429336b39a8f1d204f53d52b7ae2 204 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 35.2 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 XFC3_07190 7ec8429336b39a8f1d204f53d52b7ae2 204 SMART SM00072 2 184 1.9E-61 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit XFC3_07190 7ec8429336b39a8f1d204f53d52b7ae2 204 Gene3D G3DSA:3.40.50.300 7 180 6.9E-64 T 11-10-2018 XFC3_07190 7ec8429336b39a8f1d204f53d52b7ae2 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 1.6E-71 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 XFC3_07190 7ec8429336b39a8f1d204f53d52b7ae2 204 Pfam PF00625 Guanylate kinase 4 181 3.7E-47 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit XFC3_08340 3f21459a9e0429c1f6761813795fdefd 372 Pfam PF02405 Permease MlaE 156 364 6.4E-68 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 XFC3_08340 3f21459a9e0429c1f6761813795fdefd 372 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 128 368 3.9E-69 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria XFC3_02425 730dc441947116ae5099db9e384ebf8e 232 Gene3D G3DSA:3.10.50.40 93 232 8.3E-21 T 11-10-2018 XFC3_02425 730dc441947116ae5099db9e384ebf8e 232 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 182 229 1.1E-6 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XFC3_02425 730dc441947116ae5099db9e384ebf8e 232 SUPERFAMILY SSF54534 27 232 2.95E-37 T 11-10-2018 XFC3_02425 730dc441947116ae5099db9e384ebf8e 232 Gene3D G3DSA:1.10.287.460 23 88 1.0E-17 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 XFC3_02425 730dc441947116ae5099db9e384ebf8e 232 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 17 135 1.4E-25 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 XFC3_10675 84623a2e3c6713d28426cf559b706767 340 SUPERFAMILY SSF53474 42 333 1.85E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_10675 84623a2e3c6713d28426cf559b706767 340 Gene3D G3DSA:3.40.50.1820 38 336 3.6E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_10675 84623a2e3c6713d28426cf559b706767 340 PIRSF PIRSF000443 38 340 1.7E-62 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 XFC3_10675 84623a2e3c6713d28426cf559b706767 340 Pfam PF00561 alpha/beta hydrolase fold 60 321 8.8E-16 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFC3_08605 d7b98024dc76002f3a5604b076e8d1fe 1273 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 944 1272 1.4E-53 T 11-10-2018 IPR007452 Translocation and assembly module TamB XFC3_01870 c4c3cd0189a219f00bc4bed7e772d7d1 334 SUPERFAMILY SSF51735 124 300 4.25E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFC3_01870 c4c3cd0189a219f00bc4bed7e772d7d1 334 Gene3D G3DSA:3.40.50.720 134 300 2.5E-97 T 11-10-2018 XFC3_01870 c4c3cd0189a219f00bc4bed7e772d7d1 334 SMART SM00829 24 331 1.5E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XFC3_01870 c4c3cd0189a219f00bc4bed7e772d7d1 334 SUPERFAMILY SSF50129 11 150 1.17E-35 T 11-10-2018 IPR011032 GroES-like superfamily XFC3_01870 c4c3cd0189a219f00bc4bed7e772d7d1 334 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 12 333 8.9E-120 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI XFC3_01870 c4c3cd0189a219f00bc4bed7e772d7d1 334 Gene3D G3DSA:3.90.180.10 26 332 2.5E-97 T 11-10-2018 XFC3_01870 c4c3cd0189a219f00bc4bed7e772d7d1 334 Pfam PF00107 Zinc-binding dehydrogenase 167 278 8.7E-8 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XFC3_06235 f457a7dff8aa4c8a2d1f515b6135a2eb 150 SUPERFAMILY SSF50249 3 138 2.78E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_06235 f457a7dff8aa4c8a2d1f515b6135a2eb 150 Gene3D G3DSA:2.40.50.140 3 149 5.5E-22 T 11-10-2018 XFC3_06235 f457a7dff8aa4c8a2d1f515b6135a2eb 150 Pfam PF00436 Single-strand binding protein family 9 109 1.2E-11 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XFC3_06235 f457a7dff8aa4c8a2d1f515b6135a2eb 150 PIRSF PIRSF002070 1 149 9.6E-24 T 11-10-2018 XFC3_11640 5188264a7dc158f4e1a2006bea98baeb 112 Gene3D G3DSA:2.60.300.12 2 107 5.0E-31 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFC3_11640 5188264a7dc158f4e1a2006bea98baeb 112 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 XFC3_11640 5188264a7dc158f4e1a2006bea98baeb 112 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 4.6E-15 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 XFC3_11640 5188264a7dc158f4e1a2006bea98baeb 112 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 5.1E-30 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 XFC3_11640 5188264a7dc158f4e1a2006bea98baeb 112 SUPERFAMILY SSF89360 1 95 9.61E-26 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFC3_09905 ac5fad42ac823ed3e63b9ae3125e7ab1 360 SUPERFAMILY SSF69279 5 186 7.37E-13 T 11-10-2018 XFC3_09905 ac5fad42ac823ed3e63b9ae3125e7ab1 360 Pfam PF05954 Phage late control gene D protein (GPD) 36 320 1.4E-30 T 11-10-2018 XFC3_07545 ac5fad42ac823ed3e63b9ae3125e7ab1 360 SUPERFAMILY SSF69279 5 186 7.37E-13 T 11-10-2018 XFC3_07545 ac5fad42ac823ed3e63b9ae3125e7ab1 360 Pfam PF05954 Phage late control gene D protein (GPD) 36 320 1.4E-30 T 11-10-2018 XFC3_11520 af1b2bbfc0465e6178733c68ddeaa736 148 SUPERFAMILY SSF54523 7 144 5.76E-25 T 11-10-2018 XFC3_11520 af1b2bbfc0465e6178733c68ddeaa736 148 Pfam PF00114 Pilin (bacterial filament) 35 144 2.3E-23 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XFC3_11520 af1b2bbfc0465e6178733c68ddeaa736 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 8.0E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_11520 af1b2bbfc0465e6178733c68ddeaa736 148 Gene3D G3DSA:3.30.700.10 7 145 1.1E-27 T 11-10-2018 XFC3_11520 af1b2bbfc0465e6178733c68ddeaa736 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 2.6E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_05435 61b58d187fb570ea3f040fc98bfa7106 391 Pfam PF02486 Replication initiation factor 175 353 1.9E-31 T 11-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 XFC3_05370 61b58d187fb570ea3f040fc98bfa7106 391 Pfam PF02486 Replication initiation factor 175 353 1.9E-31 T 11-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 XFC3_11095 6ea544cb9bfb3c3750efa67dd833d105 191 Pfam PF00692 dUTPase 81 186 4.0E-7 T 11-10-2018 IPR029054 dUTPase-like XFC3_11095 6ea544cb9bfb3c3750efa67dd833d105 191 SUPERFAMILY SSF51283 3 190 7.33E-50 T 11-10-2018 IPR036157 dUTPase-like superfamily XFC3_11095 6ea544cb9bfb3c3750efa67dd833d105 191 Gene3D G3DSA:2.70.40.10 1 160 1.8E-53 T 11-10-2018 IPR036157 dUTPase-like superfamily XFC3_11095 6ea544cb9bfb3c3750efa67dd833d105 191 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 190 4.7E-47 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 XFC3_11095 6ea544cb9bfb3c3750efa67dd833d105 191 Hamap MF_00146 dCTP deaminase [dcd]. 1 191 27.723 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 XFC3_11040 00777653d516674e92b589b66b8c0d8a 326 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 96 251 2.1E-4 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XFC3_11040 00777653d516674e92b589b66b8c0d8a 326 PIRSF PIRSF028561 1 321 2.1E-166 T 11-10-2018 IPR014548 Predicted acyltransferase XFC3_10480 7e0048173c2dd4efae9931182946ad2e 337 Pfam PF01544 CorA-like Mg2+ transporter protein 46 333 9.9E-60 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 XFC3_10480 7e0048173c2dd4efae9931182946ad2e 337 SUPERFAMILY SSF144083 273 334 2.88E-16 T 11-10-2018 XFC3_10480 7e0048173c2dd4efae9931182946ad2e 337 Gene3D G3DSA:1.20.58.340 147 259 1.6E-31 T 11-10-2018 XFC3_10480 7e0048173c2dd4efae9931182946ad2e 337 Gene3D G3DSA:1.20.58.340 261 337 9.2E-19 T 11-10-2018 XFC3_10480 7e0048173c2dd4efae9931182946ad2e 337 SUPERFAMILY SSF143865 3 269 8.76E-69 T 11-10-2018 XFC3_10480 7e0048173c2dd4efae9931182946ad2e 337 Gene3D G3DSA:3.30.460.20 2 146 1.3E-26 T 11-10-2018 XFC3_08370 46345b2dbe4784ca0b898744943a3f79 338 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 67 326 3.6E-44 T 11-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region XFC3_08370 46345b2dbe4784ca0b898744943a3f79 338 Gene3D G3DSA:2.120.10.30 24 334 1.6E-93 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XFC3_08370 46345b2dbe4784ca0b898744943a3f79 338 SUPERFAMILY SSF63829 37 337 1.77E-57 T 11-10-2018 XFC3_00035 4dc2f50e3bd443b00a626e55860c836b 271 Gene3D G3DSA:3.30.2010.10 59 141 1.2E-5 T 11-10-2018 XFC3_00035 4dc2f50e3bd443b00a626e55860c836b 271 Pfam PF01435 Peptidase family M48 61 246 5.6E-35 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 XFC3_07900 0eefd1adc7f71fc0876c4526280cbb35 316 SUPERFAMILY SSF53795 137 306 1.62E-32 T 11-10-2018 XFC3_07900 0eefd1adc7f71fc0876c4526280cbb35 316 Pfam PF02603 HPr Serine kinase N terminus 5 132 7.0E-25 T 11-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 XFC3_07900 0eefd1adc7f71fc0876c4526280cbb35 316 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 309 4.8E-101 T 11-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 XFC3_07900 0eefd1adc7f71fc0876c4526280cbb35 316 SUPERFAMILY SSF75138 11 136 4.32E-31 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily XFC3_07900 0eefd1adc7f71fc0876c4526280cbb35 316 Gene3D G3DSA:3.40.1390.20 12 134 1.7E-26 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily XFC3_07900 0eefd1adc7f71fc0876c4526280cbb35 316 Gene3D G3DSA:3.40.50.300 135 315 8.1E-61 T 11-10-2018 XFC3_07900 0eefd1adc7f71fc0876c4526280cbb35 316 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 4 314 35.898 T 11-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 XFC3_07900 0eefd1adc7f71fc0876c4526280cbb35 316 Pfam PF07475 HPr Serine kinase C-terminal domain 136 306 9.8E-57 T 11-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 XFC3_03700 fe8338fadb8718d190432a5ef8f37f37 257 Gene3D G3DSA:3.20.20.70 1 257 4.8E-87 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_03700 fe8338fadb8718d190432a5ef8f37f37 257 Pfam PF00977 Histidine biosynthesis protein 5 238 3.7E-69 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 XFC3_03700 fe8338fadb8718d190432a5ef8f37f37 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 3.0E-96 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 XFC3_03700 fe8338fadb8718d190432a5ef8f37f37 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 42.675 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 XFC3_03700 fe8338fadb8718d190432a5ef8f37f37 257 SUPERFAMILY SSF51366 1 255 1.73E-68 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XFC3_03075 c513d6f52a70a47d2fc871faee2ed452 377 ProDom PD011569 METAL-BINDING IRON IRON-SULFUR 4FE-4S FERREDOXIN OXIDOREDUCTASE DOMAIN ELECTRON METHANOGENESIS A 64 290 3.0E-4 T 11-10-2018 IPR002708 Homocysteine biosynthesis enzyme, sulfur-incorporation XFC3_03075 c513d6f52a70a47d2fc871faee2ed452 377 SUPERFAMILY SSF53756 52 364 2.01E-10 T 11-10-2018 XFC3_03075 c513d6f52a70a47d2fc871faee2ed452 377 Gene3D G3DSA:3.40.50.11010 11 359 8.6E-139 T 11-10-2018 XFC3_03075 c513d6f52a70a47d2fc871faee2ed452 377 Gene3D G3DSA:3.40.50.2000 199 354 8.6E-139 T 11-10-2018 XFC3_07565 2fb0418b9c6a94cece74bb6ea89ed876 294 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 291 1.0E-103 T 11-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 XFC3_07565 2fb0418b9c6a94cece74bb6ea89ed876 294 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 289 59.229 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD XFC3_07565 2fb0418b9c6a94cece74bb6ea89ed876 294 Gene3D G3DSA:1.10.150.130 2 96 3.7E-20 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFC3_07565 2fb0418b9c6a94cece74bb6ea89ed876 294 SUPERFAMILY SSF56349 5 281 6.47E-57 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFC3_07565 2fb0418b9c6a94cece74bb6ea89ed876 294 Pfam PF00589 Phage integrase family 110 275 1.0E-46 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFC3_07565 2fb0418b9c6a94cece74bb6ea89ed876 294 Gene3D G3DSA:1.10.443.10 110 283 7.3E-57 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFC3_07565 2fb0418b9c6a94cece74bb6ea89ed876 294 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 88 1.9E-19 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XFC3_08235 cf05c79b076312e0f1e7311169aec3f0 395 SUPERFAMILY SSF55136 299 370 6.28E-5 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily XFC3_08235 cf05c79b076312e0f1e7311169aec3f0 395 Gene3D G3DSA:3.20.80.10 301 380 2.9E-5 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily XFC3_07860 d26adcaa1e39cc1617d5135bd364d9e8 75 Gene3D G3DSA:3.30.300.90 1 75 1.8E-29 T 11-10-2018 XFC3_07860 d26adcaa1e39cc1617d5135bd364d9e8 75 SUPERFAMILY SSF82657 3 74 3.27E-21 T 11-10-2018 IPR036065 BolA-like superfamily XFC3_07860 d26adcaa1e39cc1617d5135bd364d9e8 75 PIRSF PIRSF003113 2 75 2.6E-19 T 11-10-2018 IPR002634 BolA protein XFC3_07860 d26adcaa1e39cc1617d5135bd364d9e8 75 Pfam PF01722 BolA-like protein 18 74 3.4E-16 T 11-10-2018 IPR002634 BolA protein XFC3_01310 69cf6e9a10d6163f8995d01a94801ce2 132 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 71 1.3E-23 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XFC3_01310 69cf6e9a10d6163f8995d01a94801ce2 132 PRINTS PR01651 Protein-export SecG membrane protein signature 2 22 9.3E-34 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XFC3_01310 69cf6e9a10d6163f8995d01a94801ce2 132 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 9.3E-34 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XFC3_01310 69cf6e9a10d6163f8995d01a94801ce2 132 PRINTS PR01651 Protein-export SecG membrane protein signature 37 53 9.3E-34 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XFC3_01310 69cf6e9a10d6163f8995d01a94801ce2 132 PRINTS PR01651 Protein-export SecG membrane protein signature 22 36 9.3E-34 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XFC3_01310 69cf6e9a10d6163f8995d01a94801ce2 132 Pfam PF03840 Preprotein translocase SecG subunit 3 70 3.5E-20 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XFC3_01305 b80cb65662dacb57dcff5e205f5440d9 249 SUPERFAMILY SSF51351 1 247 3.93E-83 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01305 b80cb65662dacb57dcff5e205f5440d9 249 Gene3D G3DSA:3.20.20.70 1 249 5.1E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_01305 b80cb65662dacb57dcff5e205f5440d9 249 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 5.1E-59 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01305 b80cb65662dacb57dcff5e205f5440d9 249 Pfam PF00121 Triosephosphate isomerase 4 244 2.0E-87 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01305 b80cb65662dacb57dcff5e205f5440d9 249 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 247 56.118 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01305 b80cb65662dacb57dcff5e205f5440d9 249 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_01975 36a2169a9bbf3f04c0ff19d9a9d8cfa1 1521 SUPERFAMILY SSF50998 1034 1302 5.49E-7 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XFC3_01975 36a2169a9bbf3f04c0ff19d9a9d8cfa1 1521 Pfam PF05567 Neisseria PilC beta-propeller domain 991 1323 4.4E-63 T 11-10-2018 IPR008707 PilC beta-propeller domain XFC3_02600 c7aaf9c3fda12eee2e59c506f36cefcb 447 SUPERFAMILY SSF51338 12 442 5.19E-21 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XFC3_02600 c7aaf9c3fda12eee2e59c506f36cefcb 447 Pfam PF01979 Amidohydrolase family 68 415 2.3E-63 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 XFC3_02600 c7aaf9c3fda12eee2e59c506f36cefcb 447 Gene3D G3DSA:2.30.40.10 14 435 1.1E-160 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XFC3_02600 c7aaf9c3fda12eee2e59c506f36cefcb 447 SUPERFAMILY SSF51556 70 369 8.93E-94 T 11-10-2018 IPR032466 Metal-dependent hydrolase XFC3_02600 c7aaf9c3fda12eee2e59c506f36cefcb 447 Gene3D G3DSA:3.20.20.140 71 361 1.1E-160 T 11-10-2018 XFC3_11785 56e8b359faf528039f4443ce67978a10 433 Gene3D G3DSA:3.40.720.10 40 406 4.2E-119 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XFC3_11785 56e8b359faf528039f4443ce67978a10 433 Gene3D G3DSA:3.30.1360.180 253 355 4.2E-119 T 11-10-2018 XFC3_11785 56e8b359faf528039f4443ce67978a10 433 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 40 353 4.5E-72 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 XFC3_11785 56e8b359faf528039f4443ce67978a10 433 SUPERFAMILY SSF53649 27 398 9.49E-82 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 XFC3_04580 438f27e5f7c3f9a91d91eb9a18cc223d 69 ProDom PD028710 PLASMID KORC REPRESSOR TRANSCRIPTIONAL TRANSCRIPTION DNA-BINDING REGULATION KLCC 4 69 2.0E-30 T 11-10-2018 IPR020136 Transcriptional repressor KorC XFC3_06725 418765d00cec45c9f0a4ea0302f30414 78 Pfam PF04102 SlyX 14 78 2.0E-13 T 11-10-2018 IPR007236 SlyX XFC3_06725 418765d00cec45c9f0a4ea0302f30414 78 Hamap MF_00715 Protein SlyX [slyX]. 12 78 13.466 T 11-10-2018 IPR007236 SlyX XFC3_06725 418765d00cec45c9f0a4ea0302f30414 78 Gene3D G3DSA:1.20.5.300 1 59 1.5E-32 T 11-10-2018 XFC3_07445 184c7b723e822e932686ed3ad1494266 532 Pfam PF05136 Phage portal protein, lambda family 53 396 1.3E-96 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XFC3_07445 184c7b723e822e932686ed3ad1494266 532 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 45 503 2.8E-206 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XFC3_10005 184c7b723e822e932686ed3ad1494266 532 Pfam PF05136 Phage portal protein, lambda family 53 396 1.3E-96 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XFC3_10005 184c7b723e822e932686ed3ad1494266 532 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 45 503 2.8E-206 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XFC3_11310 184c7b723e822e932686ed3ad1494266 532 Pfam PF05136 Phage portal protein, lambda family 53 396 1.3E-96 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XFC3_11310 184c7b723e822e932686ed3ad1494266 532 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 45 503 2.8E-206 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XFC3_10965 380eabecb1a45a4730b8dfd756cdf6ca 148 Pfam PF02381 MraZ protein, putative antitoxin-like 85 133 2.4E-11 T 11-10-2018 IPR020603 MraZ domain XFC3_10965 380eabecb1a45a4730b8dfd756cdf6ca 148 Pfam PF02381 MraZ protein, putative antitoxin-like 2 72 1.8E-8 T 11-10-2018 IPR020603 MraZ domain XFC3_10965 380eabecb1a45a4730b8dfd756cdf6ca 148 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 148 38.546 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 XFC3_10965 380eabecb1a45a4730b8dfd756cdf6ca 148 Gene3D G3DSA:2.40.330.20 1 141 2.8E-31 T 11-10-2018 IPR038619 MraZ superfamily XFC3_10965 380eabecb1a45a4730b8dfd756cdf6ca 148 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 125 2.0E-68 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 XFC3_10965 380eabecb1a45a4730b8dfd756cdf6ca 148 SUPERFAMILY SSF89447 2 136 6.38E-33 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily XFC3_09625 0dbada4d5e19f53158ad9078da980607 162 SUPERFAMILY SSF52374 6 160 9.38E-43 T 11-10-2018 XFC3_09625 0dbada4d5e19f53158ad9078da980607 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 162 32.756 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XFC3_09625 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 2.6E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XFC3_09625 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 2.6E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XFC3_09625 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 2.6E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XFC3_09625 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 2.6E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XFC3_09625 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 2.6E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XFC3_09625 0dbada4d5e19f53158ad9078da980607 162 Gene3D G3DSA:3.40.50.620 1 162 9.3E-54 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_09625 0dbada4d5e19f53158ad9078da980607 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 67 9.9E-16 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XFC3_09625 0dbada4d5e19f53158ad9078da980607 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 8 161 3.9E-55 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XFC3_09625 0dbada4d5e19f53158ad9078da980607 162 Pfam PF01467 Cytidylyltransferase-like 10 138 1.0E-21 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 SUPERFAMILY SSF51445 192 545 8.0E-119 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 60 189 7.6E-19 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 581 634 1.1E-14 T 11-10-2018 XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 192 532 4.5E-115 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 Gene3D G3DSA:3.20.20.80 192 554 5.6E-157 T 11-10-2018 XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 SUPERFAMILY SSF55545 49 191 1.7E-23 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 215 236 1.1E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 330 348 1.1E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 282 299 1.1E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 352 365 1.1E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 149 169 1.1E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 514 531 1.1E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 496 512 1.1E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 186 203 1.1E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFC3_10735 96ced5b32f3160acf72e4eda730ce07d 812 Gene3D G3DSA:3.30.379.10 60 191 5.6E-157 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 XFC3_09650 31247a4b7ef7e96879a193eb67a6eeee 389 Pfam PF07396 Phosphate-selective porin O and P 41 389 7.1E-98 T 11-10-2018 IPR010870 Phosphate-selective porin O/P XFC3_09650 31247a4b7ef7e96879a193eb67a6eeee 389 SUPERFAMILY SSF56935 43 381 3.05E-10 T 11-10-2018 XFC3_09650 31247a4b7ef7e96879a193eb67a6eeee 389 Gene3D G3DSA:2.40.160.10 31 389 5.4E-73 T 11-10-2018 IPR023614 Porin domain superfamily XFC3_02640 514df20b35fad58de330c34c8a4befb8 144 Pfam PF03918 Cytochrome C biogenesis protein 24 134 1.2E-41 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family XFC3_02640 514df20b35fad58de330c34c8a4befb8 144 Gene3D G3DSA:1.10.8.640 26 108 1.7E-29 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily XFC3_06950 f4075e67a966bd0e66b382c7c203a94d 82 Pfam PF13986 Domain of unknown function (DUF4224) 19 63 1.2E-17 T 11-10-2018 IPR025319 Domain of unknown function DUF4224 XFC3_11090 e2fe8d80fdaff68bce03b3019902d53d 261 Pfam PF01925 Sulfite exporter TauE/SafE 11 250 3.4E-45 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 XFC3_10300 0e005ae4809136f76b6c22ee71221f7e 260 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 31 258 1.3E-50 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase XFC3_10300 0e005ae4809136f76b6c22ee71221f7e 260 Gene3D G3DSA:3.60.140.10 3 259 8.9E-76 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily XFC3_10300 0e005ae4809136f76b6c22ee71221f7e 260 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 26 257 8.3E-68 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase XFC3_10300 0e005ae4809136f76b6c22ee71221f7e 260 SUPERFAMILY SSF64438 7 258 1.83E-71 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic XFC3_07160 01b93f6a72066cc3736de263e3a62716 112 Pfam PF07238 PilZ domain 24 108 4.5E-7 T 11-10-2018 IPR009875 PilZ domain GO:0035438 XFC3_07160 01b93f6a72066cc3736de263e3a62716 112 Gene3D G3DSA:2.40.10.220 2 111 3.8E-7 T 11-10-2018 XFC3_12595 849c3e577c7986e17e2dfb603af7ce16 121 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 2 99 4.2E-17 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XFC3_12595 849c3e577c7986e17e2dfb603af7ce16 121 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 42 56 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 XFC3_12595 849c3e577c7986e17e2dfb603af7ce16 121 SUPERFAMILY SSF54211 2 99 1.49E-20 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFC3_12595 849c3e577c7986e17e2dfb603af7ce16 121 Gene3D G3DSA:3.30.230.10 1 102 3.5E-22 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFC3_12595 849c3e577c7986e17e2dfb603af7ce16 121 Pfam PF00825 Ribonuclease P 2 98 7.0E-21 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XFC3_12595 849c3e577c7986e17e2dfb603af7ce16 121 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 9 98 5.0E-44 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XFC3_12595 849c3e577c7986e17e2dfb603af7ce16 121 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 101 12.568 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XFC3_01955 b806b18a272fb2109700b2624d0f9333 170 Pfam PF12019 Type II transport protein GspH 44 160 6.7E-17 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 XFC3_01955 b806b18a272fb2109700b2624d0f9333 170 Gene3D G3DSA:3.30.700.10 8 169 7.4E-15 T 11-10-2018 XFC3_01955 b806b18a272fb2109700b2624d0f9333 170 SUPERFAMILY SSF54523 8 145 4.39E-20 T 11-10-2018 XFC3_01955 b806b18a272fb2109700b2624d0f9333 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 2.1E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_01955 b806b18a272fb2109700b2624d0f9333 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 28 2.5E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_08895 043aeec3120dec31b9af43c1b6d30868 179 SUPERFAMILY SSF55282 3 179 7.77E-74 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08895 043aeec3120dec31b9af43c1b6d30868 179 Pfam PF00281 Ribosomal protein L5 24 80 4.3E-26 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08895 043aeec3120dec31b9af43c1b6d30868 179 PIRSF PIRSF002161 1 179 9.6E-62 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08895 043aeec3120dec31b9af43c1b6d30868 179 Gene3D G3DSA:3.30.1440.10 1 179 4.7E-74 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08895 043aeec3120dec31b9af43c1b6d30868 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 41.91 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08895 043aeec3120dec31b9af43c1b6d30868 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.2E-37 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08895 043aeec3120dec31b9af43c1b6d30868 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_03435 d8616ebdb2037c9819afaf7a02350b93 102 SMART SM01259 21 94 8.6E-23 T 11-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XFC3_03435 d8616ebdb2037c9819afaf7a02350b93 102 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 21 92 6.8E-21 T 11-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XFC3_03435 d8616ebdb2037c9819afaf7a02350b93 102 PIRSF PIRSF028440 1 102 2.6E-40 T 11-10-2018 IPR014546 Uncharacterised conserved protein, lipid A biosynthesis XFC3_03435 d8616ebdb2037c9819afaf7a02350b93 102 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 16 99 9.0E-43 T 11-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XFC3_06155 cb80b35468e8a436e0c8ed9570f36375 208 Gene3D G3DSA:3.30.70.1070 107 173 6.5E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XFC3_06155 cb80b35468e8a436e0c8ed9570f36375 208 Pfam PF05036 Sporulation related domain 66 137 3.9E-6 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 XFC3_03570 22b0ac4cfb7536f2c9ab4b8beb0c79a5 244 Gene3D G3DSA:1.10.10.880 16 83 1.0E-7 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 XFC3_03570 22b0ac4cfb7536f2c9ab4b8beb0c79a5 244 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 19 90 3.3E-9 T 11-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 XFC3_03570 22b0ac4cfb7536f2c9ab4b8beb0c79a5 244 SUPERFAMILY SSF89069 16 83 8.37E-13 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 XFC3_05730 edfc03ea1d4b924fab39c47691bc87be 99 SUPERFAMILY SSF47413 9 94 1.42E-25 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_05730 edfc03ea1d4b924fab39c47691bc87be 99 Gene3D G3DSA:1.10.260.40 2 99 2.1E-29 T 11-10-2018 XFC3_05730 edfc03ea1d4b924fab39c47691bc87be 99 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 82 1.4E-31 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 XFC3_05730 edfc03ea1d4b924fab39c47691bc87be 99 SMART SM00530 13 68 3.2E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_05730 edfc03ea1d4b924fab39c47691bc87be 99 Pfam PF01381 Helix-turn-helix 15 64 1.3E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFC3_08940 18999e314e0d8ca22aefe03745392ff5 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 46.246 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 XFC3_08940 18999e314e0d8ca22aefe03745392ff5 275 Gene3D G3DSA:2.30.30.30 118 195 1.4E-30 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 XFC3_08940 18999e314e0d8ca22aefe03745392ff5 275 PIRSF PIRSF002158 9 275 2.1E-97 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08940 18999e314e0d8ca22aefe03745392ff5 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.1E-33 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08940 18999e314e0d8ca22aefe03745392ff5 275 SUPERFAMILY SSF50104 126 272 2.17E-57 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily XFC3_08940 18999e314e0d8ca22aefe03745392ff5 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08940 18999e314e0d8ca22aefe03745392ff5 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 4.4E-54 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 XFC3_08940 18999e314e0d8ca22aefe03745392ff5 275 Gene3D G3DSA:4.10.950.10 196 274 1.2E-34 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFC3_08940 18999e314e0d8ca22aefe03745392ff5 275 SUPERFAMILY SSF50249 3 125 6.17E-47 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFC3_08940 18999e314e0d8ca22aefe03745392ff5 275 SMART SM01382 124 253 1.4E-89 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 XFC3_08940 18999e314e0d8ca22aefe03745392ff5 275 SMART SM01383 42 118 2.7E-42 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08940 18999e314e0d8ca22aefe03745392ff5 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 1.4E-131 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 XFC3_08940 18999e314e0d8ca22aefe03745392ff5 275 Gene3D G3DSA:2.40.50.140 1 114 5.2E-46 T 11-10-2018 XFC3_07770 2ede360abf5cd612e1f527188102b188 260 Pfam PF01323 DSBA-like thioredoxin domain 95 239 5.0E-10 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 XFC3_07770 2ede360abf5cd612e1f527188102b188 260 SUPERFAMILY SSF52833 74 251 1.72E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_07770 2ede360abf5cd612e1f527188102b188 260 Gene3D G3DSA:3.40.30.10 68 258 2.3E-48 T 11-10-2018 XFC3_07970 5753a9e608d023d40b4fc1649fe23f65 202 SUPERFAMILY SSF81452 12 200 5.1E-57 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07970 5753a9e608d023d40b4fc1649fe23f65 202 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 23 202 2.3E-82 T 11-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 XFC3_07970 5753a9e608d023d40b4fc1649fe23f65 202 Gene3D G3DSA:1.20.120.80 17 202 2.1E-58 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_07970 5753a9e608d023d40b4fc1649fe23f65 202 Pfam PF00510 Cytochrome c oxidase subunit III 23 200 3.6E-13 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFC3_00840 7c11aca518506cffb1d285711a29a036 209 SMART SM00563 59 171 2.8E-31 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XFC3_00840 7c11aca518506cffb1d285711a29a036 209 Pfam PF01553 Acyltransferase 56 168 5.3E-13 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XFC3_00840 7c11aca518506cffb1d285711a29a036 209 SUPERFAMILY SSF69593 34 182 1.31E-19 T 11-10-2018 XFC3_02200 67a229f8753a66d5b67f9d742171b744 340 Gene3D G3DSA:3.90.1200.10 99 337 3.2E-62 T 11-10-2018 XFC3_02200 67a229f8753a66d5b67f9d742171b744 340 Gene3D G3DSA:3.30.200.20 7 98 8.6E-18 T 11-10-2018 XFC3_02200 67a229f8753a66d5b67f9d742171b744 340 SUPERFAMILY SSF56112 17 309 3.64E-44 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily XFC3_02200 67a229f8753a66d5b67f9d742171b744 340 Pfam PF01636 Phosphotransferase enzyme family 30 250 7.2E-28 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase XFC3_00430 6e87edf010fccf347f45c4efe8723c52 436 Gene3D G3DSA:3.40.50.11720 40 217 3.7E-45 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 XFC3_00430 6e87edf010fccf347f45c4efe8723c52 436 Gene3D G3DSA:3.40.50.2000 231 411 1.2E-62 T 11-10-2018 XFC3_00430 6e87edf010fccf347f45c4efe8723c52 436 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 42 219 1.9E-62 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 XFC3_00430 6e87edf010fccf347f45c4efe8723c52 436 SUPERFAMILY SSF53756 65 410 3.98E-15 T 11-10-2018 XFC3_04415 cfbbce11e67a95992595afc66d7361b6 202 Pfam PF02698 DUF218 domain 45 189 1.9E-28 T 11-10-2018 IPR003848 Domain of unknown function DUF218 XFC3_06080 fffa661c3b2e4ecc28d9857abfe5c8cc 106 SUPERFAMILY SSF82607 9 100 2.62E-31 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily XFC3_06080 fffa661c3b2e4ecc28d9857abfe5c8cc 106 PIRSF PIRSF004555 1 106 1.2E-36 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XFC3_06080 fffa661c3b2e4ecc28d9857abfe5c8cc 106 Pfam PF02575 YbaB/EbfC DNA-binding family 9 96 7.4E-33 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XFC3_06080 fffa661c3b2e4ecc28d9857abfe5c8cc 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 102 4.1E-32 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XFC3_06080 fffa661c3b2e4ecc28d9857abfe5c8cc 106 Gene3D G3DSA:3.30.1310.10 1 106 7.3E-42 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily XFC3_06080 fffa661c3b2e4ecc28d9857abfe5c8cc 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 95 22.167 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XFC3_01615 c05dfdf0b94fd752f147cd4ffa43c615 136 Pfam PF03203 MerC mercury resistance protein 11 122 3.0E-21 T 11-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 XFC3_02120 53759eedd575f13fd8fea8d0b7239ef6 299 SUPERFAMILY SSF52402 37 265 2.65E-54 T 11-10-2018 XFC3_02120 53759eedd575f13fd8fea8d0b7239ef6 299 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 6 280 54.821 T 11-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 XFC3_02120 53759eedd575f13fd8fea8d0b7239ef6 299 Pfam PF01171 PP-loop family 50 213 2.9E-16 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 XFC3_02120 53759eedd575f13fd8fea8d0b7239ef6 299 Gene3D G3DSA:3.40.50.620 11 280 3.0E-47 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFC3_02120 53759eedd575f13fd8fea8d0b7239ef6 299 PIRSF PIRSF004976 3 294 2.2E-70 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 XFC3_05865 7fb36a18139fcd8b405a20830685b5fc 191 Pfam PF02498 BRO family, N-terminal domain 15 99 3.8E-23 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_05865 7fb36a18139fcd8b405a20830685b5fc 191 SMART SM01040 14 99 2.4E-38 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_07230 c7bbdad2aa32ab75ea92129ace7a1490 148 Pfam PF02643 Uncharacterized ACR, COG1430 34 140 1.3E-32 T 11-10-2018 IPR003795 Protein of unknown function DUF192 XFC3_07230 c7bbdad2aa32ab75ea92129ace7a1490 148 Gene3D G3DSA:2.60.120.1140 18 142 9.4E-40 T 11-10-2018 IPR038695 Saro_0823-like superfamily XFC3_08685 6a45561d39bd65d599171aacf1ffab84 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 70 9.5E-10 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 XFC3_08685 6a45561d39bd65d599171aacf1ffab84 205 Gene3D G3DSA:3.40.30.10 2 201 2.6E-77 T 11-10-2018 XFC3_08685 6a45561d39bd65d599171aacf1ffab84 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 124 193 6.6E-9 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal XFC3_08685 6a45561d39bd65d599171aacf1ffab84 205 SUPERFAMILY SSF52833 1 76 1.05E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_08685 6a45561d39bd65d599171aacf1ffab84 205 Gene3D G3DSA:1.20.1050.10 80 192 2.6E-77 T 11-10-2018 XFC3_08685 6a45561d39bd65d599171aacf1ffab84 205 SUPERFAMILY SSF47616 82 203 3.69E-24 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XFC3_07895 5aba1e6a8647f37a25545d513731e7d7 105 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 3.6E-27 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 XFC3_07895 5aba1e6a8647f37a25545d513731e7d7 105 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 3.9E-24 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 XFC3_07895 5aba1e6a8647f37a25545d513731e7d7 105 SUPERFAMILY SSF69754 1 99 4.19E-31 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like XFC3_07895 5aba1e6a8647f37a25545d513731e7d7 105 Gene3D G3DSA:3.30.160.100 1 105 3.6E-29 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like XFC3_05890 957a04ba6d5897a4f110276bbd560a00 339 Gene3D G3DSA:1.10.443.10 170 335 7.2E-30 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFC3_05890 957a04ba6d5897a4f110276bbd560a00 339 Pfam PF00589 Phage integrase family 176 330 1.8E-17 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFC3_05890 957a04ba6d5897a4f110276bbd560a00 339 SUPERFAMILY SSF56349 65 329 2.77E-47 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFC3_05890 957a04ba6d5897a4f110276bbd560a00 339 Gene3D G3DSA:1.10.150.130 63 169 6.1E-6 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFC3_08600 6dd34274efa71b7e5a6d68dd2d73943f 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 16 255 1.1E-50 T 11-10-2018 XFC3_08600 6dd34274efa71b7e5a6d68dd2d73943f 298 SUPERFAMILY SSF51621 7 292 4.04E-97 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XFC3_08600 6dd34274efa71b7e5a6d68dd2d73943f 298 ProSitePatterns PS00161 Isocitrate lyase signature. 125 130 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 XFC3_08600 6dd34274efa71b7e5a6d68dd2d73943f 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 8 296 48.368 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 XFC3_08600 6dd34274efa71b7e5a6d68dd2d73943f 298 Gene3D G3DSA:3.20.20.60 5 298 2.1E-100 T 11-10-2018 XFC3_08600 6dd34274efa71b7e5a6d68dd2d73943f 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 11 294 1.8E-124 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 XFC3_05175 9c5b75ec0e504d72bf37e09e79b7d5f3 242 SUPERFAMILY SSF54719 121 235 1.05E-42 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_05175 9c5b75ec0e504d72bf37e09e79b7d5f3 242 Gene3D G3DSA:1.10.287.990 51 117 5.0E-23 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_05175 9c5b75ec0e504d72bf37e09e79b7d5f3 242 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 125 228 1.2E-38 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_05175 9c5b75ec0e504d72bf37e09e79b7d5f3 242 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 34 117 1.4E-27 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_05175 9c5b75ec0e504d72bf37e09e79b7d5f3 242 PIRSF PIRSF000349 10 239 2.0E-78 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_05175 9c5b75ec0e504d72bf37e09e79b7d5f3 242 PRINTS PR01703 Manganese superoxide dismutase signature 37 48 7.0E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_05175 9c5b75ec0e504d72bf37e09e79b7d5f3 242 PRINTS PR01703 Manganese superoxide dismutase signature 154 162 7.0E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_05175 9c5b75ec0e504d72bf37e09e79b7d5f3 242 PRINTS PR01703 Manganese superoxide dismutase signature 58 71 7.0E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_05175 9c5b75ec0e504d72bf37e09e79b7d5f3 242 PRINTS PR01703 Manganese superoxide dismutase signature 100 113 7.0E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_05175 9c5b75ec0e504d72bf37e09e79b7d5f3 242 PRINTS PR01703 Manganese superoxide dismutase signature 194 206 7.0E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_05175 9c5b75ec0e504d72bf37e09e79b7d5f3 242 Gene3D G3DSA:2.40.500.20 123 242 1.3E-45 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_05175 9c5b75ec0e504d72bf37e09e79b7d5f3 242 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 196 203 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_05175 9c5b75ec0e504d72bf37e09e79b7d5f3 242 SUPERFAMILY SSF46609 25 118 1.06E-32 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFC3_07500 4b2c1b29e7bc88bea9c8b3fe71e60fa0 297 Pfam PF04865 Baseplate J-like protein 113 254 1.1E-24 T 11-10-2018 IPR006949 Baseplate protein J-like XFC3_07500 4b2c1b29e7bc88bea9c8b3fe71e60fa0 297 PIRSF PIRSF020481 5 297 2.1E-118 T 11-10-2018 IPR014507 Baseplate assembly protein J, predicted XFC3_09950 4b2c1b29e7bc88bea9c8b3fe71e60fa0 297 Pfam PF04865 Baseplate J-like protein 113 254 1.1E-24 T 11-10-2018 IPR006949 Baseplate protein J-like XFC3_09950 4b2c1b29e7bc88bea9c8b3fe71e60fa0 297 PIRSF PIRSF020481 5 297 2.1E-118 T 11-10-2018 IPR014507 Baseplate assembly protein J, predicted XFC3_05625 6cb439a7e14f5f98665cf198eab13a94 145 Pfam PF11681 Protein of unknown function (DUF3277) 26 132 9.1E-10 T 11-10-2018 IPR021695 Bacteriophage rv5, Orf52 XFC3_06820 6cb439a7e14f5f98665cf198eab13a94 145 Pfam PF11681 Protein of unknown function (DUF3277) 26 132 9.1E-10 T 11-10-2018 IPR021695 Bacteriophage rv5, Orf52 XFC3_03725 96509ddea88795b09950d3daf9c71b66 477 Pfam PF13520 Amino acid permease 27 440 2.5E-61 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XFC3_03725 96509ddea88795b09950d3daf9c71b66 477 PIRSF PIRSF006060 9 477 1.9E-96 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XFC3_03725 96509ddea88795b09950d3daf9c71b66 477 Gene3D G3DSA:1.20.1740.10 22 476 3.2E-123 T 11-10-2018 XFC3_07065 4a579530d3779f1f8b97a57e76e9c3ee 186 Pfam PF00578 AhpC/TSA family 10 132 1.2E-32 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XFC3_07065 4a579530d3779f1f8b97a57e76e9c3ee 186 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 186 2.0E-99 T 11-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 XFC3_07065 4a579530d3779f1f8b97a57e76e9c3ee 186 Gene3D G3DSA:3.40.30.10 1 185 8.3E-60 T 11-10-2018 XFC3_07065 4a579530d3779f1f8b97a57e76e9c3ee 186 PIRSF PIRSF000239 1 186 1.1E-52 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XFC3_07065 4a579530d3779f1f8b97a57e76e9c3ee 186 SUPERFAMILY SSF52833 3 185 2.15E-55 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_06305 2e770d449fa0868cf9ab81c146762179 222 SUPERFAMILY SSF69118 9 217 2.08E-38 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 XFC3_06305 2e770d449fa0868cf9ab81c146762179 222 Pfam PF02627 Carboxymuconolactone decarboxylase family 129 213 1.0E-10 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 XFC3_06305 2e770d449fa0868cf9ab81c146762179 222 Pfam PF02627 Carboxymuconolactone decarboxylase family 10 72 3.4E-6 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 XFC3_06305 2e770d449fa0868cf9ab81c146762179 222 Gene3D G3DSA:1.20.1290.10 4 220 1.4E-47 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 XFC3_04970 1b80daadac02808b0b0668ca50685582 542 SUPERFAMILY SSF53335 60 388 5.2E-66 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_04970 1b80daadac02808b0b0668ca50685582 542 PIRSF PIRSF015855 3 531 7.9E-151 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XFC3_04970 1b80daadac02808b0b0668ca50685582 542 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 85 97 1.4E-19 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XFC3_04970 1b80daadac02808b0b0668ca50685582 542 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 335 357 1.4E-19 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XFC3_04970 1b80daadac02808b0b0668ca50685582 542 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 358 372 1.4E-19 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XFC3_04970 1b80daadac02808b0b0668ca50685582 542 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 126 145 1.4E-19 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XFC3_04970 1b80daadac02808b0b0668ca50685582 542 Pfam PF01555 DNA methylase 85 386 2.1E-45 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XFC3_01265 69de83563d0cb4979663a4278840fa30 213 Gene3D G3DSA:3.40.50.300 113 213 3.5E-17 T 11-10-2018 XFC3_01265 69de83563d0cb4979663a4278840fa30 213 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 58 6.8E-8 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 XFC3_01265 69de83563d0cb4979663a4278840fa30 213 Pfam PF04851 Type III restriction enzyme, res subunit 113 199 2.0E-12 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XFC3_01265 69de83563d0cb4979663a4278840fa30 213 SUPERFAMILY SSF52540 80 194 1.72E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01265 69de83563d0cb4979663a4278840fa30 213 Gene3D G3DSA:3.90.1570.50 1 107 2.9E-10 T 11-10-2018 XFC3_05950 50aeba4e4f66e30e860b2e52adf2167f 401 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 318 6.8E-108 T 11-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFC3_05950 50aeba4e4f66e30e860b2e52adf2167f 401 Pfam PF07055 Enoyl reductase FAD binding domain 327 390 2.7E-29 T 11-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFC3_05950 50aeba4e4f66e30e860b2e52adf2167f 401 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 4.0E-34 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFC3_05950 50aeba4e4f66e30e860b2e52adf2167f 401 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 396 54.831 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFC3_05950 50aeba4e4f66e30e860b2e52adf2167f 401 Gene3D G3DSA:3.40.50.720 1 400 3.3E-171 T 11-10-2018 XFC3_06710 888a435cbaa86d6652db759e1acba3b9 340 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 266 279 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XFC3_06710 888a435cbaa86d6652db759e1acba3b9 340 Gene3D G3DSA:3.40.1190.20 9 340 1.2E-133 T 11-10-2018 IPR029056 Ribokinase-like XFC3_06710 888a435cbaa86d6652db759e1acba3b9 340 SUPERFAMILY SSF53613 12 336 3.74E-75 T 11-10-2018 IPR029056 Ribokinase-like XFC3_06710 888a435cbaa86d6652db759e1acba3b9 340 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 44 68 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XFC3_06710 888a435cbaa86d6652db759e1acba3b9 340 Pfam PF00294 pfkB family carbohydrate kinase 13 327 2.5E-58 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB XFC3_03275 2126dabe7dc09e6422015fee18003076 166 Pfam PF00959 Phage lysozyme 30 137 1.7E-20 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XFC3_03275 2126dabe7dc09e6422015fee18003076 166 SUPERFAMILY SSF53955 5 148 1.07E-47 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFC3_03275 2126dabe7dc09e6422015fee18003076 166 Gene3D G3DSA:1.10.530.40 3 154 9.7E-51 T 11-10-2018 XFC3_01920 ff782a25f9a798c51e9a3a8b706f35e1 212 Pfam PF09976 Tetratricopeptide repeat-like domain 17 202 1.1E-29 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 XFC3_01920 ff782a25f9a798c51e9a3a8b706f35e1 212 Gene3D G3DSA:1.25.40.10 42 196 3.5E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFC3_11035 2d924a1984b018b7bb4067e59457029b 207 Gene3D G3DSA:2.50.20.10 22 184 3.7E-5 T 11-10-2018 XFC3_09045 7299a16f76f6b8cddb0db9a1c8c79274 455 Gene3D G3DSA:3.30.2290.10 10 239 5.7E-83 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal XFC3_09045 7299a16f76f6b8cddb0db9a1c8c79274 455 SUPERFAMILY SSF111283 20 454 6.28E-116 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 XFC3_09045 7299a16f76f6b8cddb0db9a1c8c79274 455 Pfam PF01523 Putative modulator of DNA gyrase 39 331 5.8E-53 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 XFC3_06445 304471ea7f8528e5debb87a317b6b927 385 SUPERFAMILY SSF56281 107 355 2.49E-34 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFC3_06445 304471ea7f8528e5debb87a317b6b927 385 Gene3D G3DSA:3.60.15.10 42 344 2.8E-72 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFC3_06445 304471ea7f8528e5debb87a317b6b927 385 Pfam PF12706 Beta-lactamase superfamily domain 123 317 7.2E-44 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFC3_04360 5c691d9377c0579d22cde98a5a362dcc 170 SUPERFAMILY SSF69349 7 166 7.77E-39 T 11-10-2018 XFC3_04695 aa50726b75182497f424ff65b6f508bd 102 Gene3D G3DSA:3.30.2310.20 1 98 1.4E-19 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XFC3_04695 aa50726b75182497f424ff65b6f508bd 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 92 1.8E-10 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XFC3_01915 03dea472f6b67658b2130caf5cc1dcc3 287 SUPERFAMILY SSF47413 24 90 9.19E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFC3_01915 03dea472f6b67658b2130caf5cc1dcc3 287 Gene3D G3DSA:1.10.260.40 17 123 1.3E-20 T 11-10-2018 XFC3_01915 03dea472f6b67658b2130caf5cc1dcc3 287 Pfam PF13413 Helix-turn-helix domain 27 87 3.4E-19 T 11-10-2018 XFC3_01915 03dea472f6b67658b2130caf5cc1dcc3 287 Pfam PF13464 Domain of unknown function (DUF4115) 203 275 2.0E-13 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 XFC3_06845 3364774b15fdbfe0cbb3c2d863b63d40 124 Pfam PF13262 Protein of unknown function (DUF4054) 10 114 3.0E-27 T 11-10-2018 IPR025127 Protein of unknown function DUF4054 XFC3_01240 7f6e47391904f9d7bdada36389aa5374 132 SUPERFAMILY SSF88723 3 119 2.81E-9 T 11-10-2018 IPR029060 PIN-like domain superfamily XFC3_01240 7f6e47391904f9d7bdada36389aa5374 132 Gene3D G3DSA:3.40.50.1010 1 106 3.2E-7 T 11-10-2018 XFC3_01240 7f6e47391904f9d7bdada36389aa5374 132 Pfam PF01850 PIN domain 4 119 5.1E-7 T 11-10-2018 IPR002716 PIN domain XFC3_02000 0ac075a477ca44c6b79a3539329cae04 127 Pfam PF13274 Protein of unknown function (DUF4065) 2 80 3.8E-6 T 11-10-2018 IPR025272 Domain of unknown function DUF4065 XFC3_06045 07d729794c74a882c59dcd1227a6b151 615 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 59 219 5.0E-14 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like XFC3_10645 3dfe53febdf83357ae5f4a77347c0a4c 218 Gene3D G3DSA:2.40.160.20 34 218 9.0E-31 T 11-10-2018 XFC3_10645 3dfe53febdf83357ae5f4a77347c0a4c 218 SUPERFAMILY SSF56925 43 218 5.76E-17 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XFC3_10645 3dfe53febdf83357ae5f4a77347c0a4c 218 Pfam PF03922 OmpW family 43 218 6.4E-53 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 XFC3_02325 b1c7c04a7444024604fd942de1c04841 269 Gene3D G3DSA:3.40.1190.20 2 267 2.4E-90 T 11-10-2018 IPR029056 Ribokinase-like XFC3_02325 b1c7c04a7444024604fd942de1c04841 269 Pfam PF08543 Phosphomethylpyrimidine kinase 16 258 3.0E-87 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 XFC3_02325 b1c7c04a7444024604fd942de1c04841 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 9 259 8.7E-87 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XFC3_02325 b1c7c04a7444024604fd942de1c04841 269 SUPERFAMILY SSF53613 9 261 8.42E-73 T 11-10-2018 IPR029056 Ribokinase-like XFC3_08530 928ef0239d305d75404ea71fff26f869 337 Gene3D G3DSA:3.40.50.1820 11 337 2.4E-98 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_08530 928ef0239d305d75404ea71fff26f869 337 SUPERFAMILY SSF53474 50 333 1.0E-69 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_08530 928ef0239d305d75404ea71fff26f869 337 Pfam PF07859 alpha/beta hydrolase fold 103 309 1.6E-71 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 XFC3_08530 928ef0239d305d75404ea71fff26f869 337 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 102 118 - T 11-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 XFC3_06440 3e733ffc3d632f3ce40c035c68b22b69 405 Pfam PF07995 Glucose / Sorbosone dehydrogenase 71 398 7.7E-128 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase XFC3_06440 3e733ffc3d632f3ce40c035c68b22b69 405 Gene3D G3DSA:2.120.10.30 57 402 2.2E-110 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XFC3_06440 3e733ffc3d632f3ce40c035c68b22b69 405 SUPERFAMILY SSF50952 52 403 3.01E-48 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 XFC3_02285 ee9e335aaa76f803a829588b4914f32a 317 Gene3D G3DSA:3.90.550.10 2 211 1.3E-14 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_02285 ee9e335aaa76f803a829588b4914f32a 317 SUPERFAMILY SSF53448 4 176 8.84E-15 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_02285 ee9e335aaa76f803a829588b4914f32a 317 Pfam PF00535 Glycosyl transferase family 2 10 139 3.1E-13 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XFC3_03895 5d59633615c60c52dce0c7cb05cf3d6a 126 Gene3D G3DSA:1.10.3510.10 3 124 5.1E-21 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_03895 5d59633615c60c52dce0c7cb05cf3d6a 126 SUPERFAMILY SSF160472 4 119 1.01E-40 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_03895 5d59633615c60c52dce0c7cb05cf3d6a 126 Pfam PF04591 Protein of unknown function, DUF596 57 126 8.5E-28 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFC3_09345 3df0bbb523412ac34ab9b745c485e39c 243 PIRSF PIRSF005650 1 243 1.8E-93 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 XFC3_09345 3df0bbb523412ac34ab9b745c485e39c 243 Pfam PF00696 Amino acid kinase family 8 216 1.0E-27 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XFC3_09345 3df0bbb523412ac34ab9b745c485e39c 243 SUPERFAMILY SSF53633 4 236 4.19E-71 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFC3_09345 3df0bbb523412ac34ab9b745c485e39c 243 Gene3D G3DSA:3.40.1160.10 2 242 2.6E-77 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFC3_09345 3df0bbb523412ac34ab9b745c485e39c 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 3.8E-98 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 XFC3_09345 3df0bbb523412ac34ab9b745c485e39c 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 44.695 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 XFC3_04215 44888277fb2955eff35ffee9ae833806 127 Pfam PF04379 ApaG domain 20 104 1.1E-33 T 11-10-2018 IPR007474 ApaG domain XFC3_04215 44888277fb2955eff35ffee9ae833806 127 Gene3D G3DSA:2.60.40.1470 1 127 2.7E-46 T 11-10-2018 IPR036767 ApaG domain superfamily XFC3_04215 44888277fb2955eff35ffee9ae833806 127 SUPERFAMILY SSF110069 6 127 1.83E-46 T 11-10-2018 IPR036767 ApaG domain superfamily XFC3_04215 44888277fb2955eff35ffee9ae833806 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 31.609 T 11-10-2018 IPR023065 Uncharacterised protein family ApaG XFC3_05100 9beb2a0da11c4d5d80943e7b61d0c624 415 SUPERFAMILY SSF118215 3 406 8.63E-100 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XFC3_05100 9beb2a0da11c4d5d80943e7b61d0c624 415 Gene3D G3DSA:1.10.3860.10 1 411 1.4E-118 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XFC3_05100 9beb2a0da11c4d5d80943e7b61d0c624 415 PRINTS PR00173 Glutamate-aspartate symporter signature 334 353 6.4E-35 T 11-10-2018 XFC3_05100 9beb2a0da11c4d5d80943e7b61d0c624 415 PRINTS PR00173 Glutamate-aspartate symporter signature 361 381 6.4E-35 T 11-10-2018 XFC3_05100 9beb2a0da11c4d5d80943e7b61d0c624 415 PRINTS PR00173 Glutamate-aspartate symporter signature 234 253 6.4E-35 T 11-10-2018 XFC3_05100 9beb2a0da11c4d5d80943e7b61d0c624 415 PRINTS PR00173 Glutamate-aspartate symporter signature 299 325 6.4E-35 T 11-10-2018 XFC3_05100 9beb2a0da11c4d5d80943e7b61d0c624 415 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 6.4E-35 T 11-10-2018 XFC3_05100 9beb2a0da11c4d5d80943e7b61d0c624 415 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 6.4E-35 T 11-10-2018 XFC3_05100 9beb2a0da11c4d5d80943e7b61d0c624 415 PRINTS PR00173 Glutamate-aspartate symporter signature 151 173 6.4E-35 T 11-10-2018 XFC3_05100 9beb2a0da11c4d5d80943e7b61d0c624 415 Pfam PF00375 Sodium:dicarboxylate symporter family 3 405 5.3E-110 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 XFC3_07760 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 204 29.693 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD XFC3_07760 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 Gene3D G3DSA:1.10.3890.10 2 204 2.6E-56 T 11-10-2018 IPR035932 HflD-like superfamily XFC3_07760 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 Pfam PF04356 Protein of unknown function (DUF489) 7 196 2.0E-58 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD XFC3_07760 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 10 190 1.0E-90 T 11-10-2018 XFC3_07760 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 SUPERFAMILY SSF101322 3 203 1.14E-59 T 11-10-2018 IPR035932 HflD-like superfamily XFC3_12190 972749aff5f79ec72bb020a44a3f0aa0 573 Pfam PF04389 Peptidase family M28 313 514 5.6E-27 T 11-10-2018 IPR007484 Peptidase M28 XFC3_12190 972749aff5f79ec72bb020a44a3f0aa0 573 Gene3D G3DSA:3.40.630.10 242 525 2.0E-36 T 11-10-2018 XFC3_12190 972749aff5f79ec72bb020a44a3f0aa0 573 Pfam PF02225 PA domain 147 224 2.7E-5 T 11-10-2018 IPR003137 PA domain XFC3_12190 972749aff5f79ec72bb020a44a3f0aa0 573 SUPERFAMILY SSF53187 42 534 1.82E-42 T 11-10-2018 XFC3_12190 972749aff5f79ec72bb020a44a3f0aa0 573 SUPERFAMILY SSF52025 145 229 3.66E-5 T 11-10-2018 XFC3_11130 ad5a14bf3b7244b53bcac27dd099fc5f 444 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 5 440 31.144 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 XFC3_11130 ad5a14bf3b7244b53bcac27dd099fc5f 444 Pfam PF13742 OB-fold nucleic acid binding domain 11 100 6.2E-26 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 XFC3_11130 ad5a14bf3b7244b53bcac27dd099fc5f 444 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 355 1.7E-125 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 XFC3_11130 ad5a14bf3b7244b53bcac27dd099fc5f 444 Pfam PF02601 Exonuclease VII, large subunit 124 437 2.5E-93 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 XFC3_01190 aec8b6b0f95fc3cae869003e2550232d 455 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 304 311 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XFC3_01190 aec8b6b0f95fc3cae869003e2550232d 455 Gene3D G3DSA:3.40.630.10 134 454 3.8E-116 T 11-10-2018 XFC3_01190 aec8b6b0f95fc3cae869003e2550232d 455 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 7.8E-40 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFC3_01190 aec8b6b0f95fc3cae869003e2550232d 455 PRINTS PR00481 Cytosol aminopeptidase signature 328 343 7.8E-40 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFC3_01190 aec8b6b0f95fc3cae869003e2550232d 455 PRINTS PR00481 Cytosol aminopeptidase signature 219 236 7.8E-40 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFC3_01190 aec8b6b0f95fc3cae869003e2550232d 455 PRINTS PR00481 Cytosol aminopeptidase signature 241 262 7.8E-40 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFC3_01190 aec8b6b0f95fc3cae869003e2550232d 455 PRINTS PR00481 Cytosol aminopeptidase signature 300 320 7.8E-40 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFC3_01190 aec8b6b0f95fc3cae869003e2550232d 455 SUPERFAMILY SSF53187 139 453 1.6E-102 T 11-10-2018 XFC3_01190 aec8b6b0f95fc3cae869003e2550232d 455 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 146 428 2.0E-99 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XFC3_01190 aec8b6b0f95fc3cae869003e2550232d 455 Gene3D G3DSA:3.40.220.10 7 131 9.7E-29 T 11-10-2018 XFC3_05735 4b991d6d43f5041d8316c0e13fda9a2f 232 SUPERFAMILY SSF57938 147 186 9.68E-5 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily XFC3_03860 8900333dd7e3ba17555dac8518a704e1 379 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 243 325 1.2E-9 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFC3_04775 bee0b100e6489be0837abb8927262ca3 155 Pfam PF01878 EVE domain 6 153 3.1E-53 T 11-10-2018 IPR002740 EVE domain XFC3_04775 bee0b100e6489be0837abb8927262ca3 155 SUPERFAMILY SSF88697 2 154 1.24E-58 T 11-10-2018 IPR015947 PUA-like superfamily XFC3_04775 bee0b100e6489be0837abb8927262ca3 155 Gene3D G3DSA:3.10.590.10 1 155 1.5E-62 T 11-10-2018 XFC3_06395 3caeff5567017be6ddf382e5bc6480f5 409 SUPERFAMILY SSF103473 11 404 5.75E-59 T 11-10-2018 IPR036259 MFS transporter superfamily XFC3_06395 3caeff5567017be6ddf382e5bc6480f5 409 Gene3D G3DSA:1.20.1250.20 22 406 9.4E-45 T 11-10-2018 XFC3_06395 3caeff5567017be6ddf382e5bc6480f5 409 Pfam PF07690 Major Facilitator Superfamily 33 348 2.6E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XFC3_03525 ca9274e4fa843813c0b7f275424adaf2 577 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 181 206 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site XFC3_03525 ca9274e4fa843813c0b7f275424adaf2 577 Gene3D G3DSA:1.20.1730.10 54 571 7.1E-57 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily XFC3_03525 ca9274e4fa843813c0b7f275424adaf2 577 Pfam PF00474 Sodium:solute symporter family 66 491 6.1E-102 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 XFC3_03525 ca9274e4fa843813c0b7f275424adaf2 577 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 66 491 1.0E-57 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 XFC3_05975 f96917b8ff544924c8a47f7452d1ed18 442 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 264 417 2.0E-22 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal XFC3_05975 f96917b8ff544924c8a47f7452d1ed18 442 SMART SM00833 264 417 4.4E-41 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal XFC3_05975 f96917b8ff544924c8a47f7452d1ed18 442 Gene3D G3DSA:3.40.50.300 10 237 4.3E-67 T 11-10-2018 XFC3_05975 f96917b8ff544924c8a47f7452d1ed18 442 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 13 218 3.2E-57 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain XFC3_05975 f96917b8ff544924c8a47f7452d1ed18 442 SUPERFAMILY SSF52540 11 317 2.57E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_05315 00957ae32d09c0e68b2a6cfd806b7af7 243 Pfam PF04493 Endonuclease V 30 226 1.8E-68 T 11-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 XFC3_05315 00957ae32d09c0e68b2a6cfd806b7af7 243 Gene3D G3DSA:3.30.2170.10 10 238 1.5E-73 T 11-10-2018 XFC3_05315 00957ae32d09c0e68b2a6cfd806b7af7 243 Hamap MF_00801 Endonuclease V [nfi]. 20 235 34.151 T 11-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 XFC3_11215 54bf18a9fc424be1b4a26d127c368150 360 SUPERFAMILY SSF69279 5 186 1.3E-12 T 11-10-2018 XFC3_11215 54bf18a9fc424be1b4a26d127c368150 360 Pfam PF05954 Phage late control gene D protein (GPD) 36 320 3.1E-30 T 11-10-2018 XFC3_00845 12076c21b93d83da0b5f5d09d4c06635 235 Pfam PF04367 Protein of unknown function (DUF502) 81 181 1.2E-26 T 11-10-2018 IPR007462 Protein of unknown function DUF502 XFC3_01155 293b9eca67475bc3bae3d3b087b99333 395 SUPERFAMILY SSF103473 17 382 1.09E-32 T 11-10-2018 IPR036259 MFS transporter superfamily XFC3_01155 293b9eca67475bc3bae3d3b087b99333 395 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 27 385 1.4E-133 T 11-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB XFC3_01155 293b9eca67475bc3bae3d3b087b99333 395 Gene3D G3DSA:1.20.1250.20 16 205 3.1E-8 T 11-10-2018 XFC3_01155 293b9eca67475bc3bae3d3b087b99333 395 Gene3D G3DSA:1.20.1250.20 212 391 3.9E-15 T 11-10-2018 XFC3_05280 1fab2ca502a90b4763ebe7638bd80132 141 Gene3D G3DSA:3.30.420.270 55 128 1.1E-12 T 11-10-2018 XFC3_05280 1fab2ca502a90b4763ebe7638bd80132 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 136 4.1E-26 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 XFC3_05280 1fab2ca502a90b4763ebe7638bd80132 141 TIGRFAM TIGR02801 tolR: protein TolR 10 135 3.9E-40 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 XFC3_05280 1fab2ca502a90b4763ebe7638bd80132 141 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 3 135 27.557 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 XFC3_00420 f1ddfd095c261ce03133658d0a68c570 443 Pfam PF04932 O-Antigen ligase 221 373 4.6E-20 T 11-10-2018 IPR007016 O-antigen ligase-related XFC3_07620 0cac7ddaf727cb690f37876cc826d3b6 381 SUPERFAMILY SSF53756 7 375 9.68E-64 T 11-10-2018 XFC3_07620 0cac7ddaf727cb690f37876cc826d3b6 381 Pfam PF13439 Glycosyltransferase Family 4 18 161 6.5E-11 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XFC3_07620 0cac7ddaf727cb690f37876cc826d3b6 381 Gene3D G3DSA:3.40.50.2000 2 166 1.1E-11 T 11-10-2018 XFC3_07620 0cac7ddaf727cb690f37876cc826d3b6 381 Gene3D G3DSA:3.40.50.2000 174 353 2.4E-42 T 11-10-2018 XFC3_07620 0cac7ddaf727cb690f37876cc826d3b6 381 Pfam PF00534 Glycosyl transferases group 1 188 349 9.4E-31 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 XFC3_11225 1140336781c661cf74e3992245d22988 160 PIRSF PIRSF029208 25 159 7.1E-58 T 11-10-2018 IPR016912 Bacteriophage P2, GpU XFC3_11225 1140336781c661cf74e3992245d22988 160 Pfam PF06995 Phage P2 GpU 33 152 7.2E-39 T 11-10-2018 IPR009734 Myoviridae, GpU XFC3_01400 d2d9b1173cd19f2946b4321e8eec3b29 396 SUPERFAMILY SSF56935 25 390 6.02E-11 T 11-10-2018 XFC3_01400 d2d9b1173cd19f2946b4321e8eec3b29 396 Pfam PF07396 Phosphate-selective porin O and P 33 396 6.5E-100 T 11-10-2018 IPR010870 Phosphate-selective porin O/P XFC3_01400 d2d9b1173cd19f2946b4321e8eec3b29 396 Gene3D G3DSA:2.40.160.10 15 396 6.0E-74 T 11-10-2018 IPR023614 Porin domain superfamily XFC3_06130 329fcab6842d74d134cc9786f1a9f04d 260 Gene3D G3DSA:3.40.50.10090 17 246 7.2E-39 T 11-10-2018 XFC3_06130 329fcab6842d74d134cc9786f1a9f04d 260 Gene3D G3DSA:3.40.50.10090 45 171 7.2E-39 T 11-10-2018 XFC3_06130 329fcab6842d74d134cc9786f1a9f04d 260 SUPERFAMILY SSF69618 14 250 3.79E-42 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_06130 329fcab6842d74d134cc9786f1a9f04d 260 Pfam PF02602 Uroporphyrinogen-III synthase HemD 28 221 2.2E-21 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFC3_00340 e74f5f7fa11509ecc8a71f312b5ba58d 184 SUPERFAMILY SSF49401 29 184 1.79E-25 T 11-10-2018 IPR008966 Adhesion domain superfamily XFC3_00340 e74f5f7fa11509ecc8a71f312b5ba58d 184 Pfam PF16970 Type-1 fimbrial protein, A 54 184 3.1E-20 T 11-10-2018 IPR039458 Type-1 fimbrial protein, A XFC3_00340 e74f5f7fa11509ecc8a71f312b5ba58d 184 Gene3D G3DSA:2.60.40.1090 26 184 4.3E-33 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XFC3_04705 67a47469e55bcac775b456379c6ff050 76 Pfam PF04255 Protein of unknown function (DUF433) 7 62 1.3E-22 T 11-10-2018 IPR007367 Protein of unknown function DUF433 XFC3_04705 67a47469e55bcac775b456379c6ff050 76 Gene3D G3DSA:1.10.10.10 6 75 5.1E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_04705 67a47469e55bcac775b456379c6ff050 76 SUPERFAMILY SSF46689 2 73 2.87E-23 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFC3_06560 b473617837eab16da8c5d4c813ae191e 286 Gene3D G3DSA:1.10.287.480 181 229 2.0E-10 T 11-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily XFC3_06560 b473617837eab16da8c5d4c813ae191e 286 SUPERFAMILY SSF118352 230 285 3.66E-17 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 XFC3_06560 b473617837eab16da8c5d4c813ae191e 286 PIRSF PIRSF005261 1 286 4.3E-77 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 XFC3_06560 b473617837eab16da8c5d4c813ae191e 286 Gene3D G3DSA:3.90.1280.10 230 285 6.0E-19 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 XFC3_06560 b473617837eab16da8c5d4c813ae191e 286 SUPERFAMILY SSF64397 4 236 8.89E-56 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 XFC3_06560 b473617837eab16da8c5d4c813ae191e 286 Gene3D G3DSA:3.55.30.10 1 180 1.6E-43 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 XFC3_06560 b473617837eab16da8c5d4c813ae191e 286 Pfam PF01430 Hsp33 protein 5 277 6.0E-68 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 XFC3_04905 2bf34300b52828364dfb9108bad20022 187 SUPERFAMILY SSF51161 3 174 4.85E-45 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFC3_04905 2bf34300b52828364dfb9108bad20022 187 Gene3D G3DSA:2.160.10.10 3 186 4.2E-60 T 11-10-2018 XFC3_04905 2bf34300b52828364dfb9108bad20022 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 1.3E-6 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_04905 2bf34300b52828364dfb9108bad20022 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 0.0013 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_07615 183697c5c9802e632fa69160fa96351e 109 Gene3D G3DSA:2.102.10.10 1 109 3.2E-30 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 XFC3_07615 183697c5c9802e632fa69160fa96351e 109 SUPERFAMILY SSF50022 2 106 6.02E-27 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 XFC3_07615 183697c5c9802e632fa69160fa96351e 109 Pfam PF00355 Rieske [2Fe-2S] domain 4 94 3.0E-17 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 XFC3_05610 9b3f39c7c38b8cb44a42a23e33aa1ccd 134 SUPERFAMILY SSF88723 3 133 1.93E-36 T 11-10-2018 IPR029060 PIN-like domain superfamily XFC3_05610 9b3f39c7c38b8cb44a42a23e33aa1ccd 134 Pfam PF01850 PIN domain 4 124 5.7E-17 T 11-10-2018 IPR002716 PIN domain XFC3_05610 9b3f39c7c38b8cb44a42a23e33aa1ccd 134 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 130 9.613 T 11-10-2018 IPR022907 VapC family GO:0004540 XFC3_05610 9b3f39c7c38b8cb44a42a23e33aa1ccd 134 Gene3D G3DSA:3.40.50.1010 2 131 5.9E-35 T 11-10-2018 XFC3_09960 3e1d0acb11654a0d0153cb6cd25b0e33 104 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 100 1.4E-23 T 11-10-2018 IPR009241 Toxin HigB-like XFC3_07490 3e1d0acb11654a0d0153cb6cd25b0e33 104 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 100 1.4E-23 T 11-10-2018 IPR009241 Toxin HigB-like XFC3_01710 50bb3fe51219f103514b66c9421cac79 480 Gene3D G3DSA:1.20.1740.10 27 477 1.2E-108 T 11-10-2018 XFC3_01710 50bb3fe51219f103514b66c9421cac79 480 Pfam PF13520 Amino acid permease 29 439 5.3E-52 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XFC3_01710 50bb3fe51219f103514b66c9421cac79 480 PIRSF PIRSF006060 15 478 3.0E-81 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XFC3_08490 c6e802a42808e7211001ddaee3b1e8ff 165 Pfam PF06853 Protein of unknown function (DUF1249) 31 145 1.3E-23 T 11-10-2018 IPR009659 Protein of unknown function DUF1249 XFC3_02720 5acadaca05350b6f42b602c5a6abf37c 293 SUPERFAMILY SSF161098 54 280 6.28E-64 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_02720 5acadaca05350b6f42b602c5a6abf37c 293 Gene3D G3DSA:1.10.3720.10 50 291 2.2E-78 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_02720 5acadaca05350b6f42b602c5a6abf37c 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 279 1.7E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFC3_02680 5eaee28181ed019aa21f6740812273fc 269 Pfam PF00795 Carbon-nitrogen hydrolase 6 230 1.4E-24 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 XFC3_02680 5eaee28181ed019aa21f6740812273fc 269 SUPERFAMILY SSF56317 1 255 1.02E-53 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XFC3_02680 5eaee28181ed019aa21f6740812273fc 269 Gene3D G3DSA:3.60.110.10 1 266 7.1E-92 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XFC3_07975 5a5451702ce2a3f1728dd5fa6640b402 113 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 19 112 1.4E-36 T 11-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 XFC3_07975 5a5451702ce2a3f1728dd5fa6640b402 113 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 24 97 2.2E-15 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 XFC3_12060 d13a71dbce3341449469ac1472923bc4 104 PIRSF PIRSF005894 1 104 6.9E-45 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 XFC3_12060 d13a71dbce3341449469ac1472923bc4 104 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 1.0E-39 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related XFC3_12060 d13a71dbce3341449469ac1472923bc4 104 Pfam PF00462 Glutaredoxin 17 81 2.1E-15 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 XFC3_12060 d13a71dbce3341449469ac1472923bc4 104 Gene3D G3DSA:3.40.30.10 6 102 2.5E-27 T 11-10-2018 XFC3_12060 d13a71dbce3341449469ac1472923bc4 104 SUPERFAMILY SSF52833 3 102 5.3E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_04020 01e627fa50a5d59bda2a25407ee1492c 187 Pfam PF00114 Pilin (bacterial filament) 36 171 5.0E-24 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XFC3_04020 01e627fa50a5d59bda2a25407ee1492c 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 2.3E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_04020 01e627fa50a5d59bda2a25407ee1492c 187 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 24 2.7E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_04020 01e627fa50a5d59bda2a25407ee1492c 187 SUPERFAMILY SSF54523 8 171 2.67E-17 T 11-10-2018 XFC3_03380 fd2b4b441914727342b83dcaa009fd39 92 Pfam PF08774 VRR-NUC domain 31 82 7.2E-6 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFC3_03380 fd2b4b441914727342b83dcaa009fd39 92 SMART SM00990 5 85 1.5E-16 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFC3_03380 fd2b4b441914727342b83dcaa009fd39 92 Gene3D G3DSA:3.40.1350.10 5 92 9.9E-29 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XFC3_10170 3cbb62b62b0d491a93422c8803e64092 472 SUPERFAMILY SSF52540 2 202 4.73E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_10170 3cbb62b62b0d491a93422c8803e64092 472 Gene3D G3DSA:3.40.50.10810 4 229 4.7E-23 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily XFC3_10170 3cbb62b62b0d491a93422c8803e64092 472 Pfam PF00176 SNF2 family N-terminal domain 25 260 2.3E-15 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 XFC3_10170 3cbb62b62b0d491a93422c8803e64092 472 SMART SM00487 2 188 1.5E-4 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFC3_10170 3cbb62b62b0d491a93422c8803e64092 472 Gene3D G3DSA:3.40.50.300 243 468 7.5E-17 T 11-10-2018 XFC3_10170 3cbb62b62b0d491a93422c8803e64092 472 SUPERFAMILY SSF52540 117 454 1.12E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_00245 6f5cbdde821077d9d799e41d776d2b64 241 Gene3D G3DSA:3.40.50.2020 115 240 5.5E-14 T 11-10-2018 XFC3_00245 6f5cbdde821077d9d799e41d776d2b64 241 SUPERFAMILY SSF53271 70 239 2.36E-27 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like XFC3_00245 6f5cbdde821077d9d799e41d776d2b64 241 Pfam PF00156 Phosphoribosyl transferase domain 196 233 2.8E-6 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XFC3_01690 e1608e8dda1f68ecc11f757770500aad 145 Pfam PF04519 Polymer-forming cytoskeletal 16 115 1.5E-22 T 11-10-2018 IPR007607 Bactofilin A/B XFC3_08385 f34457ae7c8c9a19e669744414e6339d 231 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 227 2.0E-59 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XFC3_08385 f34457ae7c8c9a19e669744414e6339d 231 Gene3D G3DSA:3.90.550.10 3 231 9.4E-66 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_08385 f34457ae7c8c9a19e669744414e6339d 231 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 227 39.903 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XFC3_08385 f34457ae7c8c9a19e669744414e6339d 231 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 226 2.5E-75 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XFC3_08385 f34457ae7c8c9a19e669744414e6339d 231 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 103 110 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XFC3_08385 f34457ae7c8c9a19e669744414e6339d 231 SUPERFAMILY SSF53448 5 226 1.44E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFC3_03730 89d76684ec3d1b059f8fccd6f5fe0dbb 483 Pfam PF13520 Amino acid permease 35 451 3.3E-58 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XFC3_03730 89d76684ec3d1b059f8fccd6f5fe0dbb 483 PIRSF PIRSF006060 12 482 5.0E-96 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XFC3_03730 89d76684ec3d1b059f8fccd6f5fe0dbb 483 Gene3D G3DSA:1.20.1740.10 25 481 1.3E-123 T 11-10-2018 XFC3_11025 316548f42248adeaf991a6fdb3e99acf 788 Gene3D G3DSA:1.20.1640.10 210 398 3.5E-5 T 11-10-2018 XFC3_11025 316548f42248adeaf991a6fdb3e99acf 788 Pfam PF03176 MMPL family 202 418 2.7E-6 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 XFC3_11025 316548f42248adeaf991a6fdb3e99acf 788 SUPERFAMILY SSF82866 628 770 1.44E-15 T 11-10-2018 XFC3_11025 316548f42248adeaf991a6fdb3e99acf 788 SUPERFAMILY SSF82866 217 392 1.83E-19 T 11-10-2018 XFC3_08870 5a85c1e97661854bfd08f4193679e02a 147 Gene3D G3DSA:3.100.10.10 74 147 2.9E-6 T 11-10-2018 XFC3_08870 5a85c1e97661854bfd08f4193679e02a 147 SUPERFAMILY SSF52080 6 145 2.09E-33 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily XFC3_08870 5a85c1e97661854bfd08f4193679e02a 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 145 3.5E-22 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P XFC3_08870 5a85c1e97661854bfd08f4193679e02a 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 147 15.628 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 XFC3_08870 5a85c1e97661854bfd08f4193679e02a 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 145 4.0E-39 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_10635 84c9a41a05e4910a359657bba6495a7a 235 SUPERFAMILY SSF161098 25 220 7.33E-42 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_10635 84c9a41a05e4910a359657bba6495a7a 235 Gene3D G3DSA:1.10.3720.10 24 234 1.1E-45 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_10635 84c9a41a05e4910a359657bba6495a7a 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 235 1.0E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFC3_01395 a0b4754257a6c0fdba6fbd9bea5d8c8c 443 Pfam PF03600 Citrate transporter 13 387 8.4E-55 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 XFC3_01395 a0b4754257a6c0fdba6fbd9bea5d8c8c 443 TIGRFAM TIGR00784 citMHS: citrate transporter 1 436 5.4E-189 T 11-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 XFC3_10150 b805d0e7bd3d99146f4778c944906a37 384 Pfam PF02498 BRO family, N-terminal domain 16 103 5.2E-22 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_10150 b805d0e7bd3d99146f4778c944906a37 384 Pfam PF02498 BRO family, N-terminal domain 146 232 3.2E-24 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_10150 b805d0e7bd3d99146f4778c944906a37 384 SMART SM01040 145 232 2.4E-38 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_10150 b805d0e7bd3d99146f4778c944906a37 384 SMART SM01040 15 103 1.9E-36 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_04815 a9f3680af793382ff306f7b08af84a0b 445 Pfam PF07793 Protein of unknown function (DUF1631) 4 439 1.3E-75 T 11-10-2018 IPR012434 Protein of unknown function DUF1631 XFC3_03765 098e98fbc9a805a2501b057596b00a9e 130 Pfam PF04591 Protein of unknown function, DUF596 56 124 1.2E-23 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFC3_03765 098e98fbc9a805a2501b057596b00a9e 130 SUPERFAMILY SSF160472 1 117 1.09E-33 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_03765 098e98fbc9a805a2501b057596b00a9e 130 Gene3D G3DSA:1.10.3510.10 4 123 8.3E-14 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_03415 2e35163fff401c452977aef63c7fa773 264 PIRSF PIRSF009320 2 82 3.3E-16 T 11-10-2018 XFC3_03415 2e35163fff401c452977aef63c7fa773 264 PIRSF PIRSF009320 89 260 6.1E-10 T 11-10-2018 XFC3_03415 2e35163fff401c452977aef63c7fa773 264 SUPERFAMILY SSF52540 1 249 6.83E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_03415 2e35163fff401c452977aef63c7fa773 264 Gene3D G3DSA:3.40.50.300 1 263 1.1E-75 T 11-10-2018 XFC3_03415 2e35163fff401c452977aef63c7fa773 264 Pfam PF13614 AAA domain 3 177 4.1E-62 T 11-10-2018 IPR025669 AAA domain XFC3_04760 d1a6d3d723b2ddc694b3d3adbfb7ffa1 545 Pfam PF00999 Sodium/hydrogen exchanger family 11 419 4.4E-65 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 XFC3_04760 d1a6d3d723b2ddc694b3d3adbfb7ffa1 545 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 541 9.0E-127 T 11-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 XFC3_02100 133d4dddb9d2c644e8a7994f18b5ab9b 301 Pfam PF04366 Las17-binding protein actin regulator 100 212 8.1E-30 T 11-10-2018 IPR007461 Ysc84 actin-binding domain XFC3_01890 1915458291b6663de35115109ff36258 430 Gene3D G3DSA:3.40.440.10 6 249 9.6E-98 T 11-10-2018 XFC3_01890 1915458291b6663de35115109ff36258 430 Gene3D G3DSA:3.90.170.10 267 430 2.3E-68 T 11-10-2018 XFC3_01890 1915458291b6663de35115109ff36258 430 SUPERFAMILY SSF52540 4 429 2.02E-173 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_01890 1915458291b6663de35115109ff36258 430 SMART SM00788 4 424 1.2E-286 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XFC3_01890 1915458291b6663de35115109ff36258 430 Pfam PF00709 Adenylosuccinate synthetase 5 423 2.1E-175 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XFC3_01890 1915458291b6663de35115109ff36258 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XFC3_01890 1915458291b6663de35115109ff36258 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 205.799 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XFC3_01890 1915458291b6663de35115109ff36258 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 2.4E-173 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XFC3_01890 1915458291b6663de35115109ff36258 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XFC3_01890 1915458291b6663de35115109ff36258 430 Gene3D G3DSA:1.10.300.10 102 201 9.6E-98 T 11-10-2018 XFC3_01280 2d7696641c6fb9ea9230b3f09613d648 223 SUPERFAMILY SSF53335 15 213 4.98E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_01280 2d7696641c6fb9ea9230b3f09613d648 223 Gene3D G3DSA:3.40.50.150 9 168 7.7E-33 T 11-10-2018 XFC3_01280 2d7696641c6fb9ea9230b3f09613d648 223 Pfam PF02384 N-6 DNA Methylase 17 182 1.2E-31 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 XFC3_08700 da32b772dfe00c1548ef25bd4d9f8b6b 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 4.2E-26 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08700 da32b772dfe00c1548ef25bd4d9f8b6b 78 SUPERFAMILY SSF143800 2 77 6.87E-31 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08700 da32b772dfe00c1548ef25bd4d9f8b6b 78 Pfam PF00830 Ribosomal L28 family 3 62 1.2E-26 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_08700 da32b772dfe00c1548ef25bd4d9f8b6b 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.386 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_08700 da32b772dfe00c1548ef25bd4d9f8b6b 78 Gene3D G3DSA:2.30.170.40 2 78 4.4E-34 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_06465 28cd48f6f4350852df92cbee312a1c34 357 SUPERFAMILY SSF50952 27 325 3.66E-34 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 XFC3_06465 28cd48f6f4350852df92cbee312a1c34 357 Pfam PF07995 Glucose / Sorbosone dehydrogenase 50 338 4.9E-60 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase XFC3_06465 28cd48f6f4350852df92cbee312a1c34 357 Gene3D G3DSA:2.120.10.30 22 356 1.5E-86 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XFC3_03950 9c5f2f11d64dd74698212e88622372a1 202 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 180 23.209 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 XFC3_03950 9c5f2f11d64dd74698212e88622372a1 202 Gene3D G3DSA:3.30.160.150 39 187 3.1E-28 T 11-10-2018 XFC3_05670 0d78f65ac7bc7daca3adfb7fcfe3c873 396 PIRSF PIRSF029215 1 396 2.4E-136 T 11-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 XFC3_05670 0d78f65ac7bc7daca3adfb7fcfe3c873 396 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 11 175 5.5E-60 T 11-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 XFC3_06460 0bdecd9ec52230b91f85a492f656601a 126 Pfam PF10012 Uncharacterized protein conserved in bacteria (DUF2255) 6 118 1.3E-43 T 11-10-2018 IPR016888 Uncharacterised conserved protein UCP028498 XFC3_06460 0bdecd9ec52230b91f85a492f656601a 126 PIRSF PIRSF028498 1 126 1.1E-64 T 11-10-2018 IPR016888 Uncharacterised conserved protein UCP028498 XFC3_00570 e100080e36f469738b2bce18c1d74504 361 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 349 5.2E-69 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 XFC3_00570 e100080e36f469738b2bce18c1d74504 361 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 349 4.3E-109 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 XFC3_05660 550b9a2544a7d05093abfab610e7ce78 327 PIRSF PIRSF029202 22 327 1.6E-132 T 11-10-2018 IPR020049 Protein of unknown function DUF2184 XFC3_05660 550b9a2544a7d05093abfab610e7ce78 327 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 84 327 3.1E-77 T 11-10-2018 IPR020049 Protein of unknown function DUF2184 XFC3_09740 f62a5fe3204cae219bc531fda0fefc52 408 ProDom PD323026 MAJOR HEAD GENE DIRECT CAPSID P24 STRUCTURAL SEQUENCING COAT APSE 287 391 6.0E-4 T 11-10-2018 XFC3_09740 f62a5fe3204cae219bc531fda0fefc52 408 Pfam PF11651 P22 coat protein - gene protein 5 1 407 1.6E-57 T 11-10-2018 IPR024659 Major capsid protein Gp5 XFC3_05570 8ccd81179123a22b92582598dc6beb8e 186 Pfam PF11041 Protein of unknown function (DUF2612) 76 158 2.8E-25 T 11-10-2018 IPR021283 Protein of unknown function DUF2612 XFC3_05570 8ccd81179123a22b92582598dc6beb8e 186 Pfam PF11041 Protein of unknown function (DUF2612) 3 70 6.6E-14 T 11-10-2018 IPR021283 Protein of unknown function DUF2612 XFC3_01990 c27c13070dce23f28919391fb52f1e64 114 SUPERFAMILY SSF46955 5 39 5.95E-5 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFC3_01990 c27c13070dce23f28919391fb52f1e64 114 Gene3D G3DSA:1.10.1660.10 4 40 2.3E-5 T 11-10-2018 XFC3_10790 00be341ad32e55407da52131d104d395 393 SUPERFAMILY SSF51905 7 386 9.72E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_10790 00be341ad32e55407da52131d104d395 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.5E-20 T 11-10-2018 XFC3_10790 00be341ad32e55407da52131d104d395 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.5E-20 T 11-10-2018 XFC3_10790 00be341ad32e55407da52131d104d395 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.5E-20 T 11-10-2018 XFC3_10790 00be341ad32e55407da52131d104d395 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.5E-20 T 11-10-2018 XFC3_10790 00be341ad32e55407da52131d104d395 393 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 XFC3_10790 00be341ad32e55407da52131d104d395 393 Pfam PF01494 FAD binding domain 8 319 2.0E-31 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 XFC3_10790 00be341ad32e55407da52131d104d395 393 Gene3D G3DSA:3.50.50.60 8 339 1.9E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFC3_10790 00be341ad32e55407da52131d104d395 393 Gene3D G3DSA:3.30.9.50 82 270 1.9E-108 T 11-10-2018 XFC3_10790 00be341ad32e55407da52131d104d395 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 391 1.7E-133 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 XFC3_10365 c4aabc0b1f4f350feb7e4fa11e2fb433 384 SMART SM00257 32 80 2.6E-8 T 11-10-2018 IPR018392 LysM domain XFC3_10365 c4aabc0b1f4f350feb7e4fa11e2fb433 384 Gene3D G3DSA:3.10.350.10 31 78 2.3E-15 T 11-10-2018 IPR036779 LysM domain superfamily XFC3_10365 c4aabc0b1f4f350feb7e4fa11e2fb433 384 Pfam PF01476 LysM domain 33 78 3.7E-13 T 11-10-2018 IPR018392 LysM domain XFC3_10365 c4aabc0b1f4f350feb7e4fa11e2fb433 384 SUPERFAMILY SSF54106 31 79 2.22E-7 T 11-10-2018 XFC3_00575 936b09d7f70a858c6d910218b08090c0 368 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 8 366 1.9E-105 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 XFC3_00575 936b09d7f70a858c6d910218b08090c0 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 365 2.3E-68 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 XFC3_05690 d24ab2d15f65f5a52af61694ad5bac1e 386 TIGRFAM TIGR01555 phge_rel_HI1409: phage-associated protein, HI1409 family 1 352 9.1E-173 T 11-10-2018 IPR006445 Phage-associated protein HI1409 XFC3_05690 d24ab2d15f65f5a52af61694ad5bac1e 386 Pfam PF06381 Protein of unknown function (DUF1073) 1 328 3.3E-111 T 11-10-2018 IPR024459 Protein of unknown function DUF1073 XFC3_05580 0be347546851ca922b0856c13aeb68cb 117 SUPERFAMILY SSF160719 25 108 4.45E-6 T 11-10-2018 XFC3_07880 cf0136daf08248609ba04e699a9fb975 176 Gene3D G3DSA:2.60.450.10 23 158 3.3E-30 T 11-10-2018 XFC3_07880 cf0136daf08248609ba04e699a9fb975 176 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 23 161 2.8E-34 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 XFC3_07880 cf0136daf08248609ba04e699a9fb975 176 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 3 161 21.773 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 XFC3_07880 cf0136daf08248609ba04e699a9fb975 176 Pfam PF03968 OstA-like protein 34 143 1.9E-21 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal XFC3_05955 3151faf6370ee0cf18f43464e8034477 154 SUPERFAMILY SSF52833 1 122 3.55E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_05955 3151faf6370ee0cf18f43464e8034477 154 Gene3D G3DSA:3.40.30.10 16 148 4.7E-38 T 11-10-2018 XFC3_05955 3151faf6370ee0cf18f43464e8034477 154 Pfam PF13899 Thioredoxin-like 30 114 5.2E-15 T 11-10-2018 XFC3_00030 5fcd89bda2a05dc2888f683f39467b85 267 Pfam PF02517 CAAX protease self-immunity 157 255 1.1E-16 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 XFC3_09205 8b61f0b66fc6cb54d5210c2beb8c9dd5 190 SMART SM00867 24 184 1.6E-16 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XFC3_09205 8b61f0b66fc6cb54d5210c2beb8c9dd5 190 Pfam PF04264 YceI-like domain 26 180 9.0E-16 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XFC3_09205 8b61f0b66fc6cb54d5210c2beb8c9dd5 190 Gene3D G3DSA:2.40.128.110 25 181 3.4E-17 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XFC3_09205 8b61f0b66fc6cb54d5210c2beb8c9dd5 190 SUPERFAMILY SSF101874 22 184 1.44E-23 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XFC3_02770 7aad03e7b8291ddb60e20dd1ff062970 98 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 80 5.8E-9 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 XFC3_06880 0d0baa6bae04983e90726b9df130293c 516 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 356 506 5.9E-57 T 11-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit XFC3_06880 0d0baa6bae04983e90726b9df130293c 516 Pfam PF17289 Terminase RNaseH-like domain 344 502 4.9E-14 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like XFC3_06145 aaa330057070856bf5711ebdf655b450 317 Gene3D G3DSA:1.10.10.10 3 59 3.3E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFC3_06145 aaa330057070856bf5711ebdf655b450 317 Gene3D G3DSA:2.30.30.100 270 317 3.3E-9 T 11-10-2018 XFC3_06145 aaa330057070856bf5711ebdf655b450 317 SUPERFAMILY SSF50037 271 315 5.04E-6 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal XFC3_06145 aaa330057070856bf5711ebdf655b450 317 Pfam PF08279 HTH domain 14 53 1.3E-5 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 XFC3_06145 aaa330057070856bf5711ebdf655b450 317 Pfam PF02237 Biotin protein ligase C terminal domain 271 315 5.2E-9 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XFC3_06145 aaa330057070856bf5711ebdf655b450 317 SUPERFAMILY SSF55681 82 266 4.47E-47 T 11-10-2018 XFC3_06145 aaa330057070856bf5711ebdf655b450 317 Pfam PF03099 Biotin/lipoate A/B protein ligase family 103 199 4.8E-11 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 XFC3_06145 aaa330057070856bf5711ebdf655b450 317 Gene3D G3DSA:3.30.930.10 61 268 2.3E-50 T 11-10-2018 XFC3_06145 aaa330057070856bf5711ebdf655b450 317 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 314 5.5E-46 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XFC3_00320 670047ac57ae738f75e9d0fba4f0da52 326 Pfam PF00419 Fimbrial protein 173 326 2.8E-20 T 11-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 XFC3_00320 670047ac57ae738f75e9d0fba4f0da52 326 SUPERFAMILY SSF49401 174 326 3.88E-27 T 11-10-2018 IPR008966 Adhesion domain superfamily XFC3_00320 670047ac57ae738f75e9d0fba4f0da52 326 Gene3D G3DSA:2.60.40.1090 179 326 2.1E-32 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XFC3_00320 670047ac57ae738f75e9d0fba4f0da52 326 Gene3D G3DSA:2.60.40.3310 9 178 1.7E-42 T 11-10-2018 XFC3_00320 670047ac57ae738f75e9d0fba4f0da52 326 SUPERFAMILY SSF49401 9 149 1.19E-5 T 11-10-2018 IPR008966 Adhesion domain superfamily XFC3_04055 ba2b070c555af9037e218b628980970a 555 SUPERFAMILY SSF101908 212 377 4.97E-6 T 11-10-2018 XFC3_04055 ba2b070c555af9037e218b628980970a 555 Pfam PF11134 Phage stabilisation protein 75 289 3.5E-10 T 11-10-2018 IPR021098 Bacteriophage P22, Gp10, DNA-stabilising XFC3_02210 c891fe3dbb9b36a3cb959f7e90248933 326 Pfam PF02424 ApbE family 16 294 2.6E-76 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 XFC3_02210 c891fe3dbb9b36a3cb959f7e90248933 326 SUPERFAMILY SSF143631 10 320 9.94E-88 T 11-10-2018 IPR003374 ApbE-like superfamily XFC3_02210 c891fe3dbb9b36a3cb959f7e90248933 326 Gene3D G3DSA:3.10.520.20 2 324 4.4E-98 T 11-10-2018 XFC3_02210 c891fe3dbb9b36a3cb959f7e90248933 326 PIRSF PIRSF006268 1 321 8.0E-78 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 XFC3_02825 0c18091f4ad8c47b0fb607e3751d2621 106 SUPERFAMILY SSF141091 1 100 5.23E-33 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_02825 0c18091f4ad8c47b0fb607e3751d2621 106 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 2.9E-33 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_02825 0c18091f4ad8c47b0fb607e3751d2621 106 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 8.8E-36 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_02825 0c18091f4ad8c47b0fb607e3751d2621 106 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 24.492 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFC3_02825 0c18091f4ad8c47b0fb607e3751d2621 106 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFC3_00060 194ffe017311155eead1e9a8c7fff051 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 134 1.3E-24 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 XFC3_00060 194ffe017311155eead1e9a8c7fff051 136 Gene3D G3DSA:3.30.420.270 63 134 7.4E-6 T 11-10-2018 XFC3_11360 c0598b4996aac435d72a9c4c900cc79e 260 Pfam PF02498 BRO family, N-terminal domain 15 98 2.4E-28 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_11360 c0598b4996aac435d72a9c4c900cc79e 260 SMART SM01040 14 98 1.2E-41 T 11-10-2018 IPR003497 BRO N-terminal domain XFC3_11240 3ccedb62009ee191c27b1fc261b62b58 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 169 5.9E-79 T 11-10-2018 IPR006498 Tail tube protein XFC3_11240 3ccedb62009ee191c27b1fc261b62b58 169 Pfam PF04985 Phage tail tube protein FII 7 168 2.3E-54 T 11-10-2018 IPR006498 Tail tube protein XFC3_07520 3ccedb62009ee191c27b1fc261b62b58 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 169 5.9E-79 T 11-10-2018 IPR006498 Tail tube protein XFC3_07520 3ccedb62009ee191c27b1fc261b62b58 169 Pfam PF04985 Phage tail tube protein FII 7 168 2.3E-54 T 11-10-2018 IPR006498 Tail tube protein XFC3_09930 3ccedb62009ee191c27b1fc261b62b58 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 169 5.9E-79 T 11-10-2018 IPR006498 Tail tube protein XFC3_09930 3ccedb62009ee191c27b1fc261b62b58 169 Pfam PF04985 Phage tail tube protein FII 7 168 2.3E-54 T 11-10-2018 IPR006498 Tail tube protein XFC3_10345 225a310d6a6591e958208beaf561a0bb 571 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 224 1.1E-19 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like XFC3_09355 df993c6f7e82b89d66b993a5e3e3aa63 226 SUPERFAMILY SSF144091 9 222 3.79E-33 T 11-10-2018 XFC3_09355 df993c6f7e82b89d66b993a5e3e3aa63 226 Gene3D G3DSA:1.20.1540.10 13 223 1.8E-26 T 11-10-2018 IPR035952 Rhomboid-like superfamily XFC3_09355 df993c6f7e82b89d66b993a5e3e3aa63 226 Pfam PF01694 Rhomboid family 64 218 1.2E-34 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 XFC3_00930 c5b57c64a7f658104dda74a4dc733b93 584 Pfam PF05960 Bacterial protein of unknown function (DUF885) 50 564 3.1E-144 T 11-10-2018 IPR010281 Protein of unknown function DUF885 XFC3_04680 9264b195723dab00bf1e739b4fa32c05 405 Pfam PF13480 Acetyltransferase (GNAT) domain 192 322 5.4E-8 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 XFC3_04680 9264b195723dab00bf1e739b4fa32c05 405 SUPERFAMILY SSF55729 181 353 1.3E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFC3_08145 8e14b3ad2570f0ae6eee889fa82dd772 319 SUPERFAMILY SSF161098 36 303 2.24E-49 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_08145 8e14b3ad2570f0ae6eee889fa82dd772 319 Gene3D G3DSA:1.10.3720.10 37 309 1.0E-56 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_08145 8e14b3ad2570f0ae6eee889fa82dd772 319 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 36 308 2.0E-84 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 XFC3_08145 8e14b3ad2570f0ae6eee889fa82dd772 319 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 37 310 3.6E-126 T 11-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 XFC3_08145 8e14b3ad2570f0ae6eee889fa82dd772 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 308 5.1E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFC3_11660 2a335d2aee426be089992eba848dbe7d 96 Pfam PF13828 Domain of unknown function (DUF4190) 11 75 2.0E-22 T 11-10-2018 IPR025241 Domain of unknown function DUF4190 XFC3_09720 186c1e5aecff7b78c7fa9d6d29c4c410 235 ProDom PD104351 DNA TRANSFER GP7 INJECTION AAF75053 GENE DIRECT ACCESSION PRECURSOR GENBANK 6 159 1.0E-62 T 11-10-2018 XFC3_02725 aa19ef11e60898a15d5d50f9ed246d2d 278 Gene3D G3DSA:1.10.3720.10 4 269 2.2E-66 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_02725 aa19ef11e60898a15d5d50f9ed246d2d 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 267 6.7E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFC3_02725 aa19ef11e60898a15d5d50f9ed246d2d 278 SUPERFAMILY SSF161098 8 278 4.8E-72 T 11-10-2018 IPR035906 MetI-like superfamily XFC3_05260 34c42fe5e522d4cdb18e8eedea9c8328 634 Pfam PF02705 K+ potassium transporter 23 555 9.4E-215 T 11-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 XFC3_05260 34c42fe5e522d4cdb18e8eedea9c8328 634 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 14 634 33.326 T 11-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup XFC3_08400 0d0fa98980db205622301cde5f4689ed 276 Pfam PF00793 DAHP synthetase I family 8 265 3.9E-65 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XFC3_08400 0d0fa98980db205622301cde5f4689ed 276 Gene3D G3DSA:3.20.20.70 2 275 9.5E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_08400 0d0fa98980db205622301cde5f4689ed 276 SUPERFAMILY SSF51569 2 270 3.66E-105 T 11-10-2018 XFC3_08400 0d0fa98980db205622301cde5f4689ed 276 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 52.127 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XFC3_08400 0d0fa98980db205622301cde5f4689ed 276 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 269 2.9E-129 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XFC3_00125 82e88a507021e49f8b6bd9bd66b14fa4 195 Pfam PF13681 Type IV pilus assembly protein PilX C-term 89 193 7.1E-10 T 11-10-2018 IPR025205 PilX/PilW C-terminal domain XFC3_00125 82e88a507021e49f8b6bd9bd66b14fa4 195 Pfam PF14341 PilX N-terminal 12 62 3.4E-15 T 11-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain XFC3_03630 787d15ba8d0eee3643ec145e78a09e9d 188 Pfam PF02622 Uncharacterized ACR, COG1678 17 175 4.5E-45 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 XFC3_03630 787d15ba8d0eee3643ec145e78a09e9d 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 6 188 35.868 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 XFC3_03630 787d15ba8d0eee3643ec145e78a09e9d 188 Gene3D G3DSA:3.40.1740.10 3 188 9.1E-62 T 11-10-2018 XFC3_03630 787d15ba8d0eee3643ec145e78a09e9d 188 SUPERFAMILY SSF143456 6 188 3.4E-61 T 11-10-2018 XFC3_09430 5b0f9a355f0afcead7b4e7d1ad86ccd5 1008 SUPERFAMILY SSF49452 32 106 4.71E-7 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 XFC3_09430 5b0f9a355f0afcead7b4e7d1ad86ccd5 1008 Pfam PF00593 TonB dependent receptor 362 1006 7.4E-15 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFC3_09430 5b0f9a355f0afcead7b4e7d1ad86ccd5 1008 SUPERFAMILY SSF56935 115 1008 1.83E-56 T 11-10-2018 XFC3_06925 642f530570d4520d085acc4f3456061d 129 SUPERFAMILY SSF103084 2 117 7.06E-17 T 11-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 XFC3_01515 e642e50ff7c55704ca7672f15ebc23f3 422 Gene3D G3DSA:3.40.50.1820 338 422 3.4E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_01515 e642e50ff7c55704ca7672f15ebc23f3 422 Gene3D G3DSA:3.40.50.1820 31 251 2.0E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_01515 e642e50ff7c55704ca7672f15ebc23f3 422 PIRSF PIRSF029171 5 421 7.5E-82 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XFC3_01515 e642e50ff7c55704ca7672f15ebc23f3 422 SUPERFAMILY SSF53474 84 369 4.42E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFC3_01515 e642e50ff7c55704ca7672f15ebc23f3 422 Pfam PF03583 Secretory lipase 127 208 3.1E-6 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XFC3_03715 b93c9a3cb75c146dfebd62a45f7ab605 188 SUPERFAMILY SSF51182 1 180 3.17E-40 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily XFC3_03715 b93c9a3cb75c146dfebd62a45f7ab605 188 Gene3D G3DSA:2.60.120.10 2 157 5.8E-51 T 11-10-2018 IPR014710 RmlC-like jelly roll fold XFC3_03715 b93c9a3cb75c146dfebd62a45f7ab605 188 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.136 T 11-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 XFC3_03715 b93c9a3cb75c146dfebd62a45f7ab605 188 Pfam PF03079 ARD/ARD' family 4 164 4.4E-34 T 11-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 XFC3_06720 c9d4e74de253cc367ba10da50d31d813 211 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 69 211 3.8E-24 T 11-10-2018 IPR018636 Protein of unknown function DUF2058 XFC3_02185 1b57d86b361e61229e56d9f6d822b60c 385 Pfam PF01594 AI-2E family transporter 25 348 3.0E-53 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like XFC3_04785 abd8f9a46c1b1f239613d26e88dac86c 99 SUPERFAMILY SSF102829 7 95 3.79E-23 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily XFC3_04785 abd8f9a46c1b1f239613d26e88dac86c 99 Gene3D G3DSA:1.10.20.30 1 48 2.2E-16 T 11-10-2018 XFC3_04785 abd8f9a46c1b1f239613d26e88dac86c 99 Pfam PF05164 Cell division protein ZapA 7 91 1.7E-18 T 11-10-2018 IPR007838 Cell division protein ZapA-like XFC3_05715 a3e6d943918bdc2aea0fc3d3a1ddc189 109 Pfam PF16083 LydA holin phage, holin superfamily III 15 90 3.1E-18 T 11-10-2018 IPR032126 LydA-like holin XFC3_06900 a3e6d943918bdc2aea0fc3d3a1ddc189 109 Pfam PF16083 LydA holin phage, holin superfamily III 15 90 3.1E-18 T 11-10-2018 IPR032126 LydA-like holin XFC3_04065 da917c764c376105fa321e2e809de3b0 409 ProDom PD323026 MAJOR HEAD GENE DIRECT CAPSID P24 STRUCTURAL SEQUENCING COAT APSE 323 392 1.0E-4 T 11-10-2018 XFC3_04065 da917c764c376105fa321e2e809de3b0 409 Pfam PF11651 P22 coat protein - gene protein 5 1 408 2.1E-54 T 11-10-2018 IPR024659 Major capsid protein Gp5 XFC3_01500 45a12706ee869ed7600ffdf4f6513b10 127 Gene3D G3DSA:3.30.1330.40 2 127 7.0E-50 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XFC3_01500 45a12706ee869ed7600ffdf4f6513b10 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 125 1.0E-48 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 XFC3_01500 45a12706ee869ed7600ffdf4f6513b10 127 SUPERFAMILY SSF55298 1 126 1.38E-44 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XFC3_01500 45a12706ee869ed7600ffdf4f6513b10 127 Pfam PF01042 Endoribonuclease L-PSP 9 125 9.9E-40 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 XFC3_07695 9ea125f92e647ba2c30f9e29812c49e6 143 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 10 128 17.495 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 XFC3_07695 9ea125f92e647ba2c30f9e29812c49e6 143 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 11 123 2.9E-20 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 XFC3_07085 fddf647dbcf1a8366a49eb4639aebdd8 210 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 77 191 1.2E-25 T 11-10-2018 IPR034756 Type II secretion system (T2SS), protein M subtype b XFC3_00120 39cae5cf6de1599ed3adb7518e5fa209 316 Pfam PF16074 Type IV Pilus-assembly protein W 220 300 5.1E-7 T 11-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 XFC3_00120 39cae5cf6de1599ed3adb7518e5fa209 316 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 34 1.3E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_07255 9442dad7c1f0195c8ead953979e9e58d 204 Pfam PF13899 Thioredoxin-like 83 168 1.5E-12 T 11-10-2018 XFC3_07255 9442dad7c1f0195c8ead953979e9e58d 204 SUPERFAMILY SSF52833 63 196 8.41E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_07255 9442dad7c1f0195c8ead953979e9e58d 204 Gene3D G3DSA:3.40.30.10 71 200 1.2E-19 T 11-10-2018 XFC3_11260 7cfaf45ab3ef5fcdc9a67c903a05b7ab 297 PIRSF PIRSF020481 5 297 2.9E-118 T 11-10-2018 IPR014507 Baseplate assembly protein J, predicted XFC3_11260 7cfaf45ab3ef5fcdc9a67c903a05b7ab 297 Pfam PF04865 Baseplate J-like protein 113 254 9.4E-25 T 11-10-2018 IPR006949 Baseplate protein J-like XFC3_04835 d96b1e12d43410a0059acb391e3f6155 183 SUPERFAMILY SSF117916 81 181 9.16E-25 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XFC3_04835 d96b1e12d43410a0059acb391e3f6155 183 Gene3D G3DSA:3.30.300.130 75 182 3.9E-31 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XFC3_04835 d96b1e12d43410a0059acb391e3f6155 183 Pfam PF01883 Iron-sulfur cluster assembly protein 85 159 2.9E-10 T 11-10-2018 IPR002744 MIP18 family-like XFC3_04835 d96b1e12d43410a0059acb391e3f6155 183 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 9 182 6.4E-78 T 11-10-2018 IPR017776 FeS assembly SUF system protein SufT, putative XFC3_11875 75baf3a1101d5c01f7a552c5517438c1 289 Gene3D G3DSA:3.30.2010.10 65 158 5.4E-32 T 11-10-2018 XFC3_11875 75baf3a1101d5c01f7a552c5517438c1 289 Pfam PF01435 Peptidase family M48 75 285 3.7E-37 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 XFC3_11875 75baf3a1101d5c01f7a552c5517438c1 289 Hamap MF_00188 Protease HtpX [htpX]. 2 287 24.509 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 XFC3_06320 468a6cf0fbbbf9435602658726dbf3db 117 Pfam PF11284 Protein of unknown function (DUF3085) 22 111 6.9E-34 T 11-10-2018 IPR021436 Protein of unknown function DUF3085 XFC3_03585 4fccc724a5cdfa1821ecdcaeea5ee115 958 Pfam PF00593 TonB dependent receptor 395 956 7.3E-32 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFC3_03585 4fccc724a5cdfa1821ecdcaeea5ee115 958 Gene3D G3DSA:2.170.130.10 39 170 1.0E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFC3_03585 4fccc724a5cdfa1821ecdcaeea5ee115 958 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 166 5.8E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFC3_03585 4fccc724a5cdfa1821ecdcaeea5ee115 958 SUPERFAMILY SSF56935 43 958 1.34E-81 T 11-10-2018 XFC3_11655 364d3806d82bfae496fc3dffaf78113d 246 SUPERFAMILY SSF52540 47 242 7.66E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_11655 364d3806d82bfae496fc3dffaf78113d 246 Pfam PF00005 ABC transporter 49 181 4.1E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFC3_11655 364d3806d82bfae496fc3dffaf78113d 246 Gene3D G3DSA:3.40.50.300 4 245 5.5E-37 T 11-10-2018 XFC3_11655 364d3806d82bfae496fc3dffaf78113d 246 SMART SM00382 58 229 0.001 T 11-10-2018 IPR003593 AAA+ ATPase domain XFC3_05800 3c223ba20a38d0a819af47c597c4e2f6 231 Gene3D G3DSA:2.10.109.10 110 228 1.5E-7 T 11-10-2018 XFC3_05800 3c223ba20a38d0a819af47c597c4e2f6 231 SUPERFAMILY SSF51306 132 222 9.77E-16 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XFC3_05800 3c223ba20a38d0a819af47c597c4e2f6 231 Pfam PF00717 Peptidase S24-like 148 211 2.0E-8 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XFC3_07275 36f60573c6ecfde88acd21e0f01bd747 98 Pfam PF13986 Domain of unknown function (DUF4224) 25 68 2.4E-18 T 11-10-2018 IPR025319 Domain of unknown function DUF4224 XFC3_10865 cb5af63219e80bede2c0dc0eab1b58f6 218 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 213 3.4E-50 T 11-10-2018 IPR018648 Protein of unknown function DUF2076 XFC3_09440 0e6ea3f6885ff13e37c0598b819326e8 863 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 38 854 30.683 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 XFC3_09440 0e6ea3f6885ff13e37c0598b819326e8 863 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 49 850 5.3E-295 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 XFC3_09440 0e6ea3f6885ff13e37c0598b819326e8 863 Pfam PF01553 Acyltransferase 331 462 2.6E-21 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XFC3_09440 0e6ea3f6885ff13e37c0598b819326e8 863 PIRSF PIRSF500064 30 862 0.0 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 XFC3_09440 0e6ea3f6885ff13e37c0598b819326e8 863 PIRSF PIRSF000437 47 863 0.0 T 11-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 XFC3_09440 0e6ea3f6885ff13e37c0598b819326e8 863 SMART SM00563 338 465 3.3E-26 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XFC3_09440 0e6ea3f6885ff13e37c0598b819326e8 863 SUPERFAMILY SSF69593 296 520 2.75E-26 T 11-10-2018 XFC3_10320 451e2c60bbed501bc8080d8328b86aa6 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 44 60 1.1E-10 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XFC3_10320 451e2c60bbed501bc8080d8328b86aa6 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 85 98 1.1E-10 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XFC3_10320 451e2c60bbed501bc8080d8328b86aa6 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 65 79 1.1E-10 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XFC3_10320 451e2c60bbed501bc8080d8328b86aa6 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 215 227 1.1E-10 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XFC3_10320 451e2c60bbed501bc8080d8328b86aa6 311 Gene3D G3DSA:3.40.50.150 43 273 1.1E-37 T 11-10-2018 XFC3_10320 451e2c60bbed501bc8080d8328b86aa6 311 SUPERFAMILY SSF53335 42 303 9.35E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_10320 451e2c60bbed501bc8080d8328b86aa6 311 Gene3D G3DSA:1.10.1020.10 92 194 1.1E-37 T 11-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 XFC3_10320 451e2c60bbed501bc8080d8328b86aa6 311 PIRSF PIRSF000398 23 307 7.8E-70 T 11-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 XFC3_10320 451e2c60bbed501bc8080d8328b86aa6 311 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 44 274 1.2E-20 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XFC3_00765 c4b993594a6d50576b776817b75c80b8 257 Pfam PF05433 Glycine zipper 2TM domain 104 144 3.5E-9 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 XFC3_07570 dbb658c7761f8f07a49b56e3bbf41022 223 Gene3D G3DSA:3.30.450.40 43 221 2.7E-41 T 11-10-2018 IPR029016 GAF-like domain superfamily XFC3_07570 dbb658c7761f8f07a49b56e3bbf41022 223 Pfam PF04340 Protein of unknown function, DUF484 4 223 2.0E-85 T 11-10-2018 IPR007435 Protein of unknown function DUF484 XFC3_11140 93476c9f882811156ea81c5b076fc3c9 600 Pfam PF03781 Sulfatase-modifying factor enzyme 1 327 598 9.8E-72 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 XFC3_11140 93476c9f882811156ea81c5b076fc3c9 600 Gene3D G3DSA:3.90.1580.10 315 600 2.8E-69 T 11-10-2018 XFC3_11140 93476c9f882811156ea81c5b076fc3c9 600 SUPERFAMILY SSF56436 326 598 2.83E-66 T 11-10-2018 IPR016187 C-type lectin fold XFC3_04590 3197cb784c234fa22908978c7b973058 120 PIRSF PIRSF017849 1 119 7.7E-53 T 11-10-2018 IPR016703 Conjugal transfer, TraD, beta/gamma-type XFC3_01355 34f772ef086c6b34ca2257667354ff34 363 Pfam PF00146 NADH dehydrogenase 31 351 9.4E-118 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01355 34f772ef086c6b34ca2257667354ff34 363 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 24 357 24.034 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_01355 34f772ef086c6b34ca2257667354ff34 363 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 229 242 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFC3_00050 020b849994fb8e8f3212daf69d560f5d 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 115 236 3.3E-36 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel XFC3_08635 6591fbb491abb0601a8548e67e48c657 1224 SUPERFAMILY SSF50998 748 1201 1.57E-8 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XFC3_08635 6591fbb491abb0601a8548e67e48c657 1224 Pfam PF05567 Neisseria PilC beta-propeller domain 751 1053 2.1E-57 T 11-10-2018 IPR008707 PilC beta-propeller domain XFC3_09590 2f49e94f9e083d56d2ecb31577b663fa 87 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 67 2.0E-24 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XFC3_09590 2f49e94f9e083d56d2ecb31577b663fa 87 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 4 71 4.7E-26 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XFC3_09590 2f49e94f9e083d56d2ecb31577b663fa 87 Pfam PF01809 Haemolytic domain 4 67 6.9E-27 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XFC3_09590 2f49e94f9e083d56d2ecb31577b663fa 87 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 68 23.12 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XFC3_09590 2f49e94f9e083d56d2ecb31577b663fa 87 SMART SM01234 2 67 2.0E-33 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XFC3_07910 0f7794049b7b8a9f78d2036e4daab220 130 Pfam PF03610 PTS system fructose IIA component 4 104 5.8E-14 T 11-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 XFC3_07910 0f7794049b7b8a9f78d2036e4daab220 130 SUPERFAMILY SSF53062 4 125 3.66E-24 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 XFC3_07910 0f7794049b7b8a9f78d2036e4daab220 130 Gene3D G3DSA:3.40.50.510 3 129 3.1E-24 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 XFC3_03960 1aa61b1fb83b3957ea880c5623cc1bc6 201 Pfam PF06197 Protein of unknown function (DUF998) 13 194 1.5E-23 T 11-10-2018 IPR009339 Protein of unknown function DUF998 XFC3_04325 18eb0352d38844d0d205572aab8aeba5 229 Pfam PF05876 Phage terminase large subunit (GpA) 10 165 9.2E-25 T 11-10-2018 IPR008866 Bacteriophage lambda, GpA XFC3_07605 08f78eb65b77e9255cd4ba71496e305b 422 Pfam PF01458 Uncharacterized protein family (UPF0051) 170 392 1.6E-61 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 XFC3_07605 08f78eb65b77e9255cd4ba71496e305b 422 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 133 402 1.3E-78 T 11-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 XFC3_07605 08f78eb65b77e9255cd4ba71496e305b 422 SUPERFAMILY SSF101960 19 414 1.23E-91 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily XFC3_01705 70fd7b6d7c62d82c39b74b3e4a93d956 389 Gene3D G3DSA:2.30.130.10 9 71 1.1E-15 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 XFC3_01705 70fd7b6d7c62d82c39b74b3e4a93d956 389 Gene3D G3DSA:3.40.50.150 178 388 1.9E-67 T 11-10-2018 XFC3_01705 70fd7b6d7c62d82c39b74b3e4a93d956 389 Gene3D G3DSA:3.30.750.80 72 177 3.3E-26 T 11-10-2018 XFC3_01705 70fd7b6d7c62d82c39b74b3e4a93d956 389 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 174 329 1.6E-17 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 XFC3_01705 70fd7b6d7c62d82c39b74b3e4a93d956 389 SUPERFAMILY SSF88697 12 69 7.7E-10 T 11-10-2018 IPR015947 PUA-like superfamily XFC3_01705 70fd7b6d7c62d82c39b74b3e4a93d956 389 SUPERFAMILY SSF53335 78 383 3.08E-66 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFC3_01970 6cfa698346bb9831ccc295c16266da81 164 Pfam PF14341 PilX N-terminal 20 67 1.7E-7 T 11-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain XFC3_00490 8c69f38a75601fd075dddec3caf197f2 343 SUPERFAMILY SSF51412 11 314 7.02E-43 T 11-10-2018 XFC3_00490 8c69f38a75601fd075dddec3caf197f2 343 Pfam PF03060 Nitronate monooxygenase 12 339 1.6E-66 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 XFC3_00490 8c69f38a75601fd075dddec3caf197f2 343 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 210 230 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 XFC3_00490 8c69f38a75601fd075dddec3caf197f2 343 Gene3D G3DSA:3.20.20.70 6 343 2.2E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_05740 ec435c12fc046d9bd0dd6ebc3aed420b 120 Gene3D G3DSA:3.30.1330.70 1 120 4.7E-8 T 11-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 XFC3_05740 ec435c12fc046d9bd0dd6ebc3aed420b 120 SUPERFAMILY SSF103084 2 119 1.57E-19 T 11-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 XFC3_02735 8f96a30edb7b244cbee20668b3d2f608 405 Pfam PF01963 TraB family 19 240 9.8E-27 T 11-10-2018 IPR002816 Pheromone shutdown, TraB XFC3_02735 8f96a30edb7b244cbee20668b3d2f608 405 TIGRFAM TIGR00261 traB: TraB family protein 28 401 3.3E-80 T 11-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal XFC3_02315 4ba7d404dd0c2fb77770f6353975e625 112 SUPERFAMILY SSF54913 2 106 2.0E-33 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta XFC3_02315 4ba7d404dd0c2fb77770f6353975e625 112 Gene3D G3DSA:3.30.70.120 1 112 2.5E-39 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XFC3_02315 4ba7d404dd0c2fb77770f6353975e625 112 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 5.1E-30 T 11-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 XFC3_01665 0aa1bec8b855a8eba30ce3e57291d1db 71 Gene3D G3DSA:1.10.10.1100 1 55 4.1E-11 T 11-10-2018 XFC3_01665 0aa1bec8b855a8eba30ce3e57291d1db 71 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 48 1.5E-9 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain XFC3_09945 6d6f817c39a14d224623aee5a12d09db 185 Pfam PF09684 Phage tail protein (Tail_P2_I) 9 150 8.0E-46 T 11-10-2018 IPR006521 Tail protein I XFC3_09945 6d6f817c39a14d224623aee5a12d09db 185 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 9 147 1.2E-69 T 11-10-2018 IPR006521 Tail protein I XFC3_07505 6d6f817c39a14d224623aee5a12d09db 185 Pfam PF09684 Phage tail protein (Tail_P2_I) 9 150 8.0E-46 T 11-10-2018 IPR006521 Tail protein I XFC3_07505 6d6f817c39a14d224623aee5a12d09db 185 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 9 147 1.2E-69 T 11-10-2018 IPR006521 Tail protein I XFC3_11255 6d6f817c39a14d224623aee5a12d09db 185 Pfam PF09684 Phage tail protein (Tail_P2_I) 9 150 8.0E-46 T 11-10-2018 IPR006521 Tail protein I XFC3_11255 6d6f817c39a14d224623aee5a12d09db 185 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 9 147 1.2E-69 T 11-10-2018 IPR006521 Tail protein I XFC3_01830 759a0fe3e69a0759f040f84574615cb4 156 Pfam PF13673 Acetyltransferase (GNAT) domain 42 135 1.7E-11 T 11-10-2018 IPR000182 GNAT domain XFC3_01830 759a0fe3e69a0759f040f84574615cb4 156 SUPERFAMILY SSF55729 11 152 1.06E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFC3_01830 759a0fe3e69a0759f040f84574615cb4 156 Gene3D G3DSA:3.40.630.30 13 156 9.0E-38 T 11-10-2018 XFC3_01830 759a0fe3e69a0759f040f84574615cb4 156 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 20 151 3.9E-50 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 XFC3_04170 75994c351da7b21e47680d560e4c0d96 211 Gene3D G3DSA:2.160.10.10 99 194 1.6E-15 T 11-10-2018 XFC3_04170 75994c351da7b21e47680d560e4c0d96 211 Gene3D G3DSA:2.160.10.10 27 98 1.1E-12 T 11-10-2018 XFC3_04170 75994c351da7b21e47680d560e4c0d96 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 126 158 1.6E-4 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_04170 75994c351da7b21e47680d560e4c0d96 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 104 2.5E-8 T 11-10-2018 IPR001451 Hexapeptide repeat XFC3_04170 75994c351da7b21e47680d560e4c0d96 211 SUPERFAMILY SSF51161 37 191 1.66E-31 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFC3_06515 da653a47a2e3a8714427b1ba322b5c91 332 Gene3D G3DSA:3.20.20.100 5 327 2.9E-110 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XFC3_06515 da653a47a2e3a8714427b1ba322b5c91 332 SUPERFAMILY SSF51430 6 321 2.62E-96 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XFC3_06515 da653a47a2e3a8714427b1ba322b5c91 332 Pfam PF00248 Aldo/keto reductase family 18 319 1.7E-75 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain XFC3_07285 1e208a12bf3bdc407dd33c77724c2903 131 Gene3D G3DSA:3.90.20.10 4 120 1.2E-8 T 11-10-2018 XFC3_11465 1e208a12bf3bdc407dd33c77724c2903 131 Gene3D G3DSA:3.90.20.10 4 120 1.2E-8 T 11-10-2018 XFC3_04465 d6fc2692bc609fce35d725e5169c1a64 319 Pfam PF06189 5'-nucleotidase 39 316 3.3E-104 T 11-10-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 XFC3_12115 e4b50340ec943178e454a45970f6e6a9 189 Pfam PF11304 Protein of unknown function (DUF3106) 46 104 4.3E-7 T 11-10-2018 IPR021455 Protein of unknown function DUF3106 XFC3_03490 181893c69161156a57af64ffe87fa568 653 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 2 608 4.4E-89 T 11-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 XFC3_03490 181893c69161156a57af64ffe87fa568 653 Pfam PF03169 OPT oligopeptide transporter protein 9 611 5.0E-124 T 11-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 XFC3_03490 181893c69161156a57af64ffe87fa568 653 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 10 612 4.3E-182 T 11-10-2018 IPR004814 Oligopeptide transporter OPT XFC3_05575 9f86bcb99aacce5a6bbdcaf22ac1cbc6 381 Pfam PF04865 Baseplate J-like protein 73 229 2.8E-13 T 11-10-2018 IPR006949 Baseplate protein J-like XFC3_05225 47be116913b5d837f2df4bcbd8feada3 157 SUPERFAMILY SSF117070 11 129 3.66E-7 T 11-10-2018 XFC3_09030 ae417eef87897f2590dfa3b139a01a97 99 SUPERFAMILY SSF54909 12 89 7.69E-6 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel XFC3_09075 0fc9a034f81729be0f1b1f88262fd749 242 Pfam PF04402 Protein of unknown function (DUF541) 40 238 2.0E-43 T 11-10-2018 IPR007497 Protein of unknown function DUF541 XFC3_09075 0fc9a034f81729be0f1b1f88262fd749 242 Gene3D G3DSA:3.30.110.170 41 239 2.4E-59 T 11-10-2018 XFC3_09075 0fc9a034f81729be0f1b1f88262fd749 242 Gene3D G3DSA:3.30.70.2970 51 158 2.4E-59 T 11-10-2018 XFC3_01160 189a6b86b116abe6fc700ce1a7298800 191 Pfam PF07273 Protein of unknown function (DUF1439) 58 156 1.4E-8 T 11-10-2018 IPR010835 Protein of unknown function DUF1439 XFC3_01160 189a6b86b116abe6fc700ce1a7298800 191 Gene3D G3DSA:3.15.10.40 56 184 1.4E-6 T 11-10-2018 XFC3_04470 e30038a138cddcc916d20d5a258c4a04 139 Gene3D G3DSA:2.60.120.10 13 134 4.5E-20 T 11-10-2018 IPR014710 RmlC-like jelly roll fold XFC3_04470 e30038a138cddcc916d20d5a258c4a04 139 PIRSF PIRSF037087 1 139 3.1E-80 T 11-10-2018 IPR017102 Uncharacterised conserved protein UCP037087 XFC3_04470 e30038a138cddcc916d20d5a258c4a04 139 SUPERFAMILY SSF51182 10 133 2.77E-24 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily XFC3_04470 e30038a138cddcc916d20d5a258c4a04 139 Pfam PF07883 Cupin domain 47 117 5.7E-18 T 11-10-2018 IPR013096 Cupin 2, conserved barrel XFC3_00610 87737846d500b59c35b0c23944930adc 248 Pfam PF05036 Sporulation related domain 173 245 3.4E-15 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 XFC3_00610 87737846d500b59c35b0c23944930adc 248 Gene3D G3DSA:3.30.70.1070 167 248 6.7E-18 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XFC3_00610 87737846d500b59c35b0c23944930adc 248 SUPERFAMILY SSF110997 172 246 9.42E-17 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XFC3_05940 89e70d423276aaed95642d0e2a03dfcc 283 Pfam PF09916 Uncharacterized protein conserved in bacteria (DUF2145) 54 256 1.6E-74 T 11-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 XFC3_05940 89e70d423276aaed95642d0e2a03dfcc 283 PIRSF PIRSF028477 3 283 8.4E-134 T 11-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 XFC3_04045 0969b267a8203dcb229f053f7006650b 249 ProDom PD104351 DNA TRANSFER GP7 INJECTION AAF75053 GENE DIRECT ACCESSION PRECURSOR GENBANK 5 156 6.0E-48 T 11-10-2018 XFC3_12290 5f26922acd95a4bb7614a7c165f33360 200 PIRSF PIRSF006324 2 198 7.0E-45 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XFC3_12290 5f26922acd95a4bb7614a7c165f33360 200 Pfam PF01810 LysE type translocator 14 194 6.2E-34 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XFC3_06870 e9008c698242fe162a7ba1a634b29f85 281 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 173 275 1.3E-21 T 11-10-2018 IPR006528 Phage head morphogenesis domain XFC3_06870 e9008c698242fe162a7ba1a634b29f85 281 Pfam PF04233 Phage Mu protein F like protein 167 272 2.2E-28 T 11-10-2018 IPR006528 Phage head morphogenesis domain XFC3_05075 07db1ba4bb7873b344aa32f53acb9a3a 722 Pfam PF01432 Peptidase family M3 269 720 2.0E-132 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 XFC3_05075 07db1ba4bb7873b344aa32f53acb9a3a 722 Gene3D G3DSA:1.10.1370.40 72 715 4.6E-246 T 11-10-2018 XFC3_05075 07db1ba4bb7873b344aa32f53acb9a3a 722 Gene3D G3DSA:1.10.1370.10 183 653 4.6E-246 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 XFC3_05075 07db1ba4bb7873b344aa32f53acb9a3a 722 SUPERFAMILY SSF55486 42 720 3.08E-180 T 11-10-2018 XFC3_05550 63cea8c2dbb01d3c5add10b013c8a522 302 SUPERFAMILY SSF50494 84 259 3.23E-11 T 11-10-2018 IPR009003 Peptidase S1, PA clan XFC3_05550 63cea8c2dbb01d3c5add10b013c8a522 302 Gene3D G3DSA:2.40.10.10 194 300 9.0E-7 T 11-10-2018 XFC3_05550 63cea8c2dbb01d3c5add10b013c8a522 302 Gene3D G3DSA:2.40.10.10 78 192 9.2E-19 T 11-10-2018 XFC3_02290 19fe4c1d3e2fa2478975472d28303d93 139 Pfam PF04138 GtrA-like protein 20 138 7.1E-14 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 XFC3_10455 3dcb3dd2732fe14fa870218335bd30c6 327 Gene3D G3DSA:3.40.50.300 110 315 5.0E-69 T 11-10-2018 XFC3_10455 3dcb3dd2732fe14fa870218335bd30c6 327 SUPERFAMILY SSF52540 118 287 3.48E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFC3_10455 3dcb3dd2732fe14fa870218335bd30c6 327 Pfam PF02562 PhoH-like protein 112 315 2.6E-91 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 XFC3_00055 98d667ab306f1e453f13c87ee920dc4c 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 136 2.9E-26 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 XFC3_00055 98d667ab306f1e453f13c87ee920dc4c 140 Gene3D G3DSA:3.30.420.270 63 132 1.4E-8 T 11-10-2018 XFC3_04270 6f4689bbf6473404e8ec3db427f35ef5 223 Pfam PF01323 DSBA-like thioredoxin domain 9 208 2.8E-51 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 XFC3_04270 6f4689bbf6473404e8ec3db427f35ef5 223 Gene3D G3DSA:3.40.30.10 6 210 7.4E-60 T 11-10-2018 XFC3_04270 6f4689bbf6473404e8ec3db427f35ef5 223 SUPERFAMILY SSF52833 7 213 1.66E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFC3_03055 e596da2e1946c6df71d1a2bddaff95be 363 Pfam PF01757 Acyltransferase family 28 337 3.3E-19 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 XFC3_09235 c1c2e15121da2071819d27ef22f52643 220 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 187 6.3E-31 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel XFC3_03665 abe4d8bb667566408457875c77401327 112 PIRSF PIRSF012508 4 106 2.8E-33 T 11-10-2018 IPR013368 TrpR homologue YerC/YecD XFC3_03665 abe4d8bb667566408457875c77401327 112 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 16 98 2.1E-17 T 11-10-2018 IPR013368 TrpR homologue YerC/YecD XFC3_03665 abe4d8bb667566408457875c77401327 112 Pfam PF01371 Trp repressor protein 16 100 5.5E-29 T 11-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 XFC3_03665 abe4d8bb667566408457875c77401327 112 SUPERFAMILY SSF48295 15 100 3.56E-24 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XFC3_03665 abe4d8bb667566408457875c77401327 112 Gene3D G3DSA:1.10.1270.10 8 105 3.9E-29 T 11-10-2018 IPR038116 TrpR-like superfamily XFC3_05680 c3b1431018ea97d2b990a68e5f10a7cb 112 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 15 104 6.6E-24 T 11-10-2018 IPR009241 Toxin HigB-like XFC3_00925 4007b727e790038b74f7dc9ef8ef66fe 608 Pfam PF05960 Bacterial protein of unknown function (DUF885) 62 593 3.4E-159 T 11-10-2018 IPR010281 Protein of unknown function DUF885 XFC3_12305 0592cd71b0c161a9fc324ba3b2a6160e 511 Pfam PF11855 Protein of unknown function (DUF3375) 9 486 5.1E-152 T 11-10-2018 IPR021804 Protein of unknown function DUF3375 XFC3_01860 6caaed83a7f32b4a7c159c158fa0375c 116 SUPERFAMILY SSF103481 78 115 5.36E-5 T 11-10-2018 XFC3_01860 6caaed83a7f32b4a7c159c158fa0375c 116 Pfam PF04342 Putative member of DMT superfamily (DUF486) 12 114 2.0E-43 T 11-10-2018 IPR007437 Protein of unknown function DUF486 XFC3_01860 6caaed83a7f32b4a7c159c158fa0375c 116 PIRSF PIRSF021239 5 116 9.4E-50 T 11-10-2018 IPR007437 Protein of unknown function DUF486 XFC3_05875 b5497871bd0d4d4e706d86d10ba5bbd9 237 Pfam PF03374 Phage antirepressor protein KilAC domain 126 231 2.5E-25 T 11-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 XFC3_05875 b5497871bd0d4d4e706d86d10ba5bbd9 237 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 13 94 9.8E-12 T 11-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family XFC3_04110 568e49f526fdf354daa0a723e93ca198 232 Gene3D G3DSA:2.10.230.10 152 203 3.5E-5 T 11-10-2018 XFC3_04110 568e49f526fdf354daa0a723e93ca198 232 SUPERFAMILY SSF57938 151 203 1.07E-5 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily XFC3_03840 1289a6589143e1c2d0de8f028592aaec 414 Pfam PF04830 Possible hemagglutinin (DUF637) 2 56 7.5E-7 T 11-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative XFC3_03840 1289a6589143e1c2d0de8f028592aaec 414 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 199 362 1.9E-26 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFC3_05825 5a93b2dee82e8b6bd2379517d8d6ccc9 156 Pfam PF07603 Protein of unknown function (DUF1566) 30 140 4.5E-16 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 XFC3_03550 314ae480f68020f07675c5a38d0afa62 125 Pfam PF16137 Domain of unknown function (DUF4845) 33 113 3.7E-19 T 11-10-2018 IPR032314 Protein of unknown function DUF4845 XFC3_03885 ebb0e2754baffa7bfe2b93c56dd18b20 130 SUPERFAMILY SSF160472 1 122 2.62E-37 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_03885 ebb0e2754baffa7bfe2b93c56dd18b20 130 Pfam PF04591 Protein of unknown function, DUF596 56 129 2.0E-23 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFC3_03885 ebb0e2754baffa7bfe2b93c56dd18b20 130 Gene3D G3DSA:1.10.3510.10 3 128 1.6E-12 T 11-10-2018 IPR023138 NMB0513-like superfamily XFC3_09175 475022fffd529f6dba00edceb0fc8d60 97 Gene3D G3DSA:2.20.130.30 32 97 1.3E-16 T 11-10-2018 XFC3_09175 475022fffd529f6dba00edceb0fc8d60 97 Pfam PF11191 Protein of unknown function (DUF2782) 40 97 3.5E-15 T 11-10-2018 IPR021357 Protein of unknown function DUF2782 XFC3_11650 581c11a797f303bbd31f4b63e100fca7 267 Pfam PF01061 ABC-2 type transporter 23 228 1.2E-23 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 XFC3_10510 0b352d6c17ae750ecf8256c790db694c 283 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 283 4.5E-139 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFC3_00835 a8e9308ec455e334ae1f09c24dbac527 174 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 98 154 3.5E-15 T 11-10-2018 IPR018637 Domain of unknown function DUF2059 XFC3_07725 4bf5a82d8bb6755cc4960e9d8b57d9d8 377 SUPERFAMILY SSF55729 179 354 1.43E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFC3_07725 4bf5a82d8bb6755cc4960e9d8b57d9d8 377 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 11 376 2.1E-133 T 11-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition XFC3_01420 d842fbd1d9787520be796a7f41f08bb0 120 Gene3D G3DSA:1.10.1660.10 9 46 2.4E-5 T 11-10-2018 XFC3_01420 d842fbd1d9787520be796a7f41f08bb0 120 SUPERFAMILY SSF46955 10 45 3.62E-5 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFC3_04530 bd13ed91c01a0406239b36c530b807ae 98 Gene3D G3DSA:3.30.2310.20 2 94 5.2E-12 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XFC3_04530 bd13ed91c01a0406239b36c530b807ae 98 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 94 1.4E-16 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XFC3_00115 1621b80ef719e5f8b04dca9bf3e27206 158 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 10 129 3.2E-18 T 11-10-2018 IPR013362 Pilus modification type IV, PilV XFC3_00115 1621b80ef719e5f8b04dca9bf3e27206 158 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 31 6.9E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFC3_12310 573153bc05183e46d9e4a8a1bdade996 234 Pfam PF13835 Domain of unknown function (DUF4194) 31 200 4.6E-43 T 11-10-2018 IPR025449 Protein of unknown function DUF4194 XFC3_10315 91a5363cb26de84e089ebaa96f41d372 373 Pfam PF09566 SacI restriction endonuclease 186 290 2.0E-4 T 11-10-2018 IPR019066 Restriction endonuclease, type II, SacI XFC3_04820 6122729ac4c8010c40fa3b4ec184d01a 77 Pfam PF07793 Protein of unknown function (DUF1631) 1 72 1.1E-13 T 11-10-2018 IPR012434 Protein of unknown function DUF1631 XFC3_10825 e2e0900dee0f9b512c889e4338a9e08c 334 Pfam PF00274 Fructose-bisphosphate aldolase class-I 6 333 3.6E-136 T 11-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10825 e2e0900dee0f9b512c889e4338a9e08c 334 Gene3D G3DSA:3.20.20.70 2 334 5.2E-149 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFC3_10825 e2e0900dee0f9b512c889e4338a9e08c 334 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 211 221 - T 11-10-2018 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFC3_10825 e2e0900dee0f9b512c889e4338a9e08c 334 SUPERFAMILY SSF51569 4 333 5.34E-131 T 11-10-2018 XFC3_09750 ef11c0acdf501d08fe3125d53dea6e2c 691 Pfam PF16510 Phage P22-like portal protein 30 631 2.7E-73 T 11-10-2018 IPR032427 Phage P22-like portal protein XFC3_09470 011ea3a16c1fe3911b456f1271285e24 255 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 110 237 4.1E-32 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 XFC3_09470 011ea3a16c1fe3911b456f1271285e24 255 PIRSF PIRSF037208 2 255 2.2E-88 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 XFC3_09470 011ea3a16c1fe3911b456f1271285e24 255 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 9 243 36.098 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 XFC3_09470 011ea3a16c1fe3911b456f1271285e24 255 SUPERFAMILY SSF55729 85 244 1.09E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFC3_09470 011ea3a16c1fe3911b456f1271285e24 255 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 19 90 5.1E-15 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 XFC3_00855 7926d81f75fe5f4fe416a82be23d7fb0 150 PIRSF PIRSF004638 1 150 1.5E-41 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 XFC3_00855 7926d81f75fe5f4fe416a82be23d7fb0 150 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 150 1.0E-39 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 XFC3_00540 ec8bc92f8a2bcafbe6f68175ab46acf5 329 Pfam PF05275 Copper resistance protein B precursor (CopB) 129 329 1.5E-66 T 11-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 XFC3_02020 446e02b9f549bed6780b8a93f8d5c81b 222 PIRSF PIRSF028583 4 222 4.3E-102 T 11-10-2018 IPR016892 Uncharacterised conserved protein UCP028583 XFC3_12450 2f7be6597cebb9fdada54dd02f96ad2a 253 Pfam PF12811 Bax inhibitor 1 like 25 251 1.7E-79 T 11-10-2018 IPR010539 Protein of unknown function UCP009160 XFC3_12450 2f7be6597cebb9fdada54dd02f96ad2a 253 PIRSF PIRSF009160 1 253 4.0E-102 T 11-10-2018 IPR010539 Protein of unknown function UCP009160 XFC3_04060 f1a0aaf63dbf9d692b4cbe82c18ddcc1 135 Gene3D G3DSA:1.10.3230.20 1 131 6.3E-8 T 11-10-2018 IPR038258 Peptidoglycan hydrolase Gp4 superfamily XFC3_01845 39b4cf0827b1494d7b8460903f5bdf4d 125 Pfam PF13511 Domain of unknown function (DUF4124) 8 50 5.0E-13 T 11-10-2018 IPR025392 Domain of unknown function DUF4124 XFC3_00170 6787bd44e1715c6b4f3b1aafcffe573c 419 Pfam PF07399 Putative Na+/H+ antiporter 6 418 9.9E-185 T 11-10-2018 IPR009978 Putative Na+/H+ antiporter XFC3_03265 32e47d3f7c44e24ca6f58e535906f391 194 PIRSF PIRSF028438 1 183 1.8E-75 T 11-10-2018 IPR016884 Uncharacterised conserved protein UCP028438 XFC3_01370 afd1b756195a2381255b18291c8c9eda 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 20.017 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 XFC3_01370 afd1b756195a2381255b18291c8c9eda 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 6.6E-23 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like XFC3_11475 c928704f6e8ffb229bf9dc27c3b84324 82 Pfam PF13986 Domain of unknown function (DUF4224) 19 63 8.1E-18 T 11-10-2018 IPR025319 Domain of unknown function DUF4224 XFC3_05750 7ccba881c6ef59dabe78c5badbe23010 362 Pfam PF07120 Protein of unknown function (DUF1376) 2 87 2.1E-33 T 11-10-2018 IPR010781 Protein of unknown function DUF1376 XFC3_02245 5660ac966c9216c120e7ad05877822aa 296 SUPERFAMILY SSF103088 201 283 1.83E-7 T 11-10-2018 IPR036737 OmpA-like domain superfamily XFC3_09785 74bc8d36de6d0b02d101f516ead91e95 240 SUPERFAMILY SSF57938 159 189 4.58E-5 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily XFC3_05935 621d99fc487689a95c859fe9c827dca2 319 Pfam PF06258 Mitochondrial fission ELM1 19 314 2.4E-75 T 11-10-2018 IPR009367 Mitochondrial fission protein ELM1-like XFC3_01885 69f697e2046d4b4108fcd22fe7e62684 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 4 59 3.6E-15 T 11-10-2018 IPR019201 Protein of unknown function DUF2065 XFC3_09230 4593615afb87e59af3fd3eb435a09320 145 Gene3D G3DSA:3.30.420.270 61 132 1.4E-11 T 11-10-2018 XFC3_09230 4593615afb87e59af3fd3eb435a09320 145 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 136 9.6E-31 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 XFC3_06230 1613c7bc15993c1c564e6c0793f3a2b3 177 Pfam PF11358 Protein of unknown function (DUF3158) 11 167 1.1E-70 T 11-10-2018 IPR021502 Protein of unknown function DUF3158 XFC3_08390 a43af5378b2b426d96b36527483ce2f3 118 Hamap MF_00599 Cell division protein FtsB [ftsB]. 2 93 32.828 T 11-10-2018 IPR023081 Cell division protein FtsB XFC3_08390 a43af5378b2b426d96b36527483ce2f3 118 Pfam PF04977 Septum formation initiator 14 92 9.6E-29 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC XFC3_03080 e16ddd716d0b6eeb3941cbb7812de431 257 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 73 239 1.1E-31 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 XFC3_03080 e16ddd716d0b6eeb3941cbb7812de431 257 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 75 238 7.5E-51 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 XFC3_05585 cb35ad8b5e0b7648a7a7dd1282eacd46 213 Gene3D G3DSA:2.40.50.230 28 126 5.0E-25 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XFC3_11775 4e9a1b8b5aeecdf50fef1f35fdec708f 192 Pfam PF13211 Protein of unknown function (DUF4019) 75 181 1.1E-26 T 11-10-2018 IPR025091 Protein of unknown function DUF4019 XFC3_12375 53bbe43e91ad46c2ac6b6ced2e3cc131 297 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 296 2.6E-81 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFC3_00590 b8061e1a4b95cb45a50fbd818742cc75 380 Pfam PF01757 Acyltransferase family 4 356 2.4E-19 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 XFC3_07165 2326f456bafca17e9a538bc11e115314 831 Pfam PF07793 Protein of unknown function (DUF1631) 18 816 2.0E-211 T 11-10-2018 IPR012434 Protein of unknown function DUF1631 XFC3_06645 7659fd86ada6b32368d34c825bad290f 269 Pfam PF04338 Protein of unknown function, DUF481 50 268 9.2E-54 T 11-10-2018 IPR007433 Protein of unknown function DUF481 XFC3_09285 9804174ba8382f5e9594dbd491ed3cf6 72 Pfam PF07896 Protein of unknown function (DUF1674) 42 72 2.0E-13 T 11-10-2018 IPR012875 Protein of unknown function DUF1674 XFC3_00735 84c97fb48939eedd67478f3739df1bfe 635 Pfam PF05960 Bacterial protein of unknown function (DUF885) 74 609 1.8E-161 T 11-10-2018 IPR010281 Protein of unknown function DUF885 XFC3_10375 084f0ad2831f127f78d195ee3a1cc3e6 157 Hamap MF_00598 Protein Smg [smg]. 5 157 28.704 T 11-10-2018 IPR007456 Smg XFC3_10375 084f0ad2831f127f78d195ee3a1cc3e6 157 Pfam PF04361 Protein of unknown function (DUF494) 6 157 1.6E-53 T 11-10-2018 IPR007456 Smg XFC3_02780 2eea3c7449d68c62b2d72095ec911dfc 325 Pfam PF00953 Glycosyl transferase family 4 77 214 2.2E-25 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 XFC3_02410 8e38535aae6bdbaff1c6c6e6878cb371 283 Pfam PF12183 Restriction endonuclease NotI 6 253 7.6E-55 T 11-10-2018 IPR022009 Restriction endonuclease, type II, NotI XFC3_11020 ecbd6ead0e1a91c48885b6e915e492e1 144 Gene3D G3DSA:3.10.129.10 2 143 3.5E-6 T 11-10-2018 XFC3_11020 ecbd6ead0e1a91c48885b6e915e492e1 144 SUPERFAMILY SSF54637 8 142 1.49E-12 T 11-10-2018 IPR029069 HotDog domain superfamily XFC3_04430 d79cc38ae480cb0e1f9b603f7d0c3f29 298 Pfam PF02649 Type I GTP cyclohydrolase folE2 6 293 4.0E-66 T 11-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 XFC3_04430 d79cc38ae480cb0e1f9b603f7d0c3f29 298 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 5 298 32.308 T 11-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 XFC3_08350 4642621ccf0c7493e43e54ec33feaba9 308 Pfam PF02470 MlaD protein 40 115 3.4E-14 T 11-10-2018 IPR003399 Mce/MlaD XFC3_04665 79c744c8645dadde0511bd0400bd0305 366 Pfam PF11899 Protein of unknown function (DUF3419) 5 321 1.3E-24 T 11-10-2018 IPR021829 Protein of unknown function DUF3419 XFC3_06040 a948f2898f212865336d98fa0a9dbc7c 169 Pfam PF02620 Uncharacterized ACR, COG1399 62 167 3.4E-10 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD XFC3_09775 17ecc1213129a4c00b5ae18f26438fd5 109 Pfam PF16083 LydA holin phage, holin superfamily III 15 90 2.5E-18 T 11-10-2018 IPR032126 LydA-like holin XFC3_04960 85a4138ed848fc8923aecf2b5f0bca84 106 Pfam PF13698 Domain of unknown function (DUF4156) 24 103 6.3E-11 T 11-10-2018 IPR025294 Protein of unknown function DUF4156 XFC3_03070 44f55a81b5eb2e49e0e33811796444c5 510 Pfam PF13440 Polysaccharide biosynthesis protein 44 335 1.3E-78 T 11-10-2018 XFC3_01560 96b62a9eb4015e4fadd10be912a410f0 220 Pfam PF05137 Fimbrial assembly protein (PilN) 100 184 2.7E-27 T 11-10-2018 IPR007813 Fimbrial assembly PilN XFC3_05850 019971862a809e581d1b13b6db284e93 273 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 2 269 6.1E-82 T 11-10-2018 IPR019276 Protein of unkown function DUF2303 XFC3_10505 82297b0608d5a6548d12f16673b1abaf 282 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 282 2.1E-142 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFC3_05965 f4b426208f94f0fdbc0cf7210880229d 215 Pfam PF02036 SCP-2 sterol transfer family 22 123 6.8E-16 T 11-10-2018 IPR003033 SCP2 sterol-binding domain XFC3_03185 5aa9e52d74cd6d04edcb1ef51f577f39 126 Gene3D G3DSA:1.10.3830.10 8 125 2.1E-37 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 XFC3_03185 5aa9e52d74cd6d04edcb1ef51f577f39 126 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 121 6.3E-33 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 XFC3_06135 6e0535e9b802d4d900be5fed9588643c 326 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 17 322 6.0E-12 T 11-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX XFC3_01835 d4c856f1cd5599ee87de8eda6bd460c2 141 SUPERFAMILY SSF102220 106 134 8.76E-5 T 11-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFC3_03390 c152c37a0d3eca97650f0903edd75d0d 98 Pfam PF13986 Domain of unknown function (DUF4224) 25 68 5.1E-20 T 11-10-2018 IPR025319 Domain of unknown function DUF4224