XF_2336 5090d196b018dfc2b53ff396b4b8fade 241 Gene3D G3DSA:3.40.50.2300 3 134 2.4E-37 T 14-10-2018 XF_2336 5090d196b018dfc2b53ff396b4b8fade 241 SUPERFAMILY SSF52172 12 138 4.41E-40 T 14-10-2018 IPR011006 CheY-like superfamily XF_2336 5090d196b018dfc2b53ff396b4b8fade 241 SMART SM00448 13 125 3.2E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2336 5090d196b018dfc2b53ff396b4b8fade 241 SMART SM00862 159 233 2.3E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XF_2336 5090d196b018dfc2b53ff396b4b8fade 241 SUPERFAMILY SSF46894 134 234 3.12E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XF_2336 5090d196b018dfc2b53ff396b4b8fade 241 Pfam PF00072 Response regulator receiver domain 15 125 9.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2336 5090d196b018dfc2b53ff396b4b8fade 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 233 1.2E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XF_2336 5090d196b018dfc2b53ff396b4b8fade 241 Gene3D G3DSA:1.10.10.10 138 238 2.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_0682 5ae9d3517edfc6b9294b258d4a44ac71 92 SMART SM00990 5 85 1.4E-17 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XF_0682 5ae9d3517edfc6b9294b258d4a44ac71 92 Gene3D G3DSA:3.40.1350.10 5 92 3.4E-30 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XF_0682 5ae9d3517edfc6b9294b258d4a44ac71 92 Pfam PF08774 VRR-NUC domain 31 82 5.2E-6 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XF_2526 5ae9d3517edfc6b9294b258d4a44ac71 92 SMART SM00990 5 85 1.4E-17 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XF_2526 5ae9d3517edfc6b9294b258d4a44ac71 92 Gene3D G3DSA:3.40.1350.10 5 92 3.4E-30 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XF_2526 5ae9d3517edfc6b9294b258d4a44ac71 92 Pfam PF08774 VRR-NUC domain 31 82 5.2E-6 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XF_2292 5ae9d3517edfc6b9294b258d4a44ac71 92 SMART SM00990 5 85 1.4E-17 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XF_2292 5ae9d3517edfc6b9294b258d4a44ac71 92 Gene3D G3DSA:3.40.1350.10 5 92 3.4E-30 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XF_2292 5ae9d3517edfc6b9294b258d4a44ac71 92 Pfam PF08774 VRR-NUC domain 31 82 5.2E-6 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XF_2106 3b774bbb6e514035a963a96cb1db8abd 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 622 1.5E-265 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 XF_2106 3b774bbb6e514035a963a96cb1db8abd 629 Gene3D G3DSA:3.50.50.60 3 232 6.4E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_2106 3b774bbb6e514035a963a96cb1db8abd 629 Gene3D G3DSA:3.50.50.60 309 459 4.8E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_2106 3b774bbb6e514035a963a96cb1db8abd 629 Gene3D G3DSA:1.10.10.1800 460 551 9.7E-26 T 14-10-2018 XF_2106 3b774bbb6e514035a963a96cb1db8abd 629 Gene3D G3DSA:1.10.150.570 570 622 1.9E-22 T 14-10-2018 XF_2106 3b774bbb6e514035a963a96cb1db8abd 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 625 41.481 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 XF_2106 3b774bbb6e514035a963a96cb1db8abd 629 SUPERFAMILY SSF51905 8 262 1.33E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_2106 3b774bbb6e514035a963a96cb1db8abd 629 Pfam PF01134 Glucose inhibited division protein A 9 398 6.6E-162 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 XF_2106 3b774bbb6e514035a963a96cb1db8abd 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 XF_2106 3b774bbb6e514035a963a96cb1db8abd 629 SMART SM01228 547 618 6.5E-40 T 14-10-2018 XF_2106 3b774bbb6e514035a963a96cb1db8abd 629 Pfam PF13932 GidA associated domain 403 617 8.4E-73 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 XF_2106 3b774bbb6e514035a963a96cb1db8abd 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 XF_2641 935b7ce79c60d986c1680a35687e4f51 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 6.7E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2641 935b7ce79c60d986c1680a35687e4f51 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 3.2E-152 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 XF_2641 935b7ce79c60d986c1680a35687e4f51 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.1E-37 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 XF_2641 935b7ce79c60d986c1680a35687e4f51 363 Gene3D G3DSA:3.10.20.30 48 360 2.2E-146 T 14-10-2018 IPR012675 Beta-grasp domain superfamily XF_2641 935b7ce79c60d986c1680a35687e4f51 363 Gene3D G3DSA:1.10.150.300 113 200 2.2E-146 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 XF_2641 935b7ce79c60d986c1680a35687e4f51 363 SUPERFAMILY SSF52540 3 301 5.64E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2641 935b7ce79c60d986c1680a35687e4f51 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.5E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2641 935b7ce79c60d986c1680a35687e4f51 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.5E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2641 935b7ce79c60d986c1680a35687e4f51 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.5E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2641 935b7ce79c60d986c1680a35687e4f51 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.5E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2641 935b7ce79c60d986c1680a35687e4f51 363 PIRSF PIRSF006641 1 363 4.1E-150 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 XF_2641 935b7ce79c60d986c1680a35687e4f51 363 SUPERFAMILY SSF81271 279 360 7.19E-35 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XF_2641 935b7ce79c60d986c1680a35687e4f51 363 Gene3D G3DSA:3.40.50.300 4 278 2.2E-146 T 14-10-2018 XF_2641 935b7ce79c60d986c1680a35687e4f51 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 43.486 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 XF_1628 84c1299f2f8e81fd98fa7f168b21f966 283 Pfam PF04338 Protein of unknown function, DUF481 64 282 1.1E-53 T 14-10-2018 IPR007433 Protein of unknown function DUF481 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 976 1097 6.41E-9 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 1598 1709 9.29E-11 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 1471 1585 1.83E-10 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 753 874 6.8E-9 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.1300.30 1982 2059 3.0E-28 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 496 523 9.29E-5 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 530 651 5.62E-9 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1688 1727 8.6E-10 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1393 1433 1.2E-10 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1562 1602 1.5E-13 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1170 1210 1.2E-10 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 501 541 8.8E-11 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 627 665 1.8E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 947 987 1.2E-10 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 724 764 8.8E-11 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 404 442 3.2E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1073 1111 3.2E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1944 1976 1.1E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 850 888 1.8E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1296 1334 3.2E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1830 1865 8.7E-7 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 279 319 7.5E-6 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 1735 1853 3.53E-15 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05658 Head domain of trimeric autotransporter adhesin 162 188 6.0E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1888 1912 2.1E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1766 1792 8.8E-7 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 942 969 7.45E-5 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF03895 YadA-like membrane anchor domain 1999 2059 1.9E-16 T 14-10-2018 IPR005594 YadA-like, C-terminal XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 113 300 6.41E-14 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.150.10.10 1875 1974 1.2E-26 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.390.90 1260 1300 1.2E-11 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.390.90 369 408 1.2E-10 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.390.90 1655 1692 8.4E-12 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.390.90 1037 1077 1.2E-11 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.390.90 814 854 3.4E-11 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.390.90 1523 1567 1.3E-7 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.390.90 591 631 3.4E-11 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:1.20.5.170 1301 1344 1.5E-7 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:1.20.5.170 632 674 3.5E-7 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:1.20.5.170 1078 1121 1.5E-7 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:1.20.5.170 855 898 4.0E-7 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:1.20.5.170 409 452 1.5E-7 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF54523 1955 2059 1.18E-22 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 307 428 6.28E-11 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 1886 1965 6.54E-23 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.150.10.10 101 299 1.2E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 719 746 7.72E-5 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 1165 1192 7.45E-5 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 1380 1415 7.45E-5 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.20.25.490 1580 1639 5.2E-16 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.20.25.490 965 1024 9.6E-17 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.20.25.490 1188 1247 9.6E-17 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.20.25.490 519 578 2.3E-16 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.20.25.490 742 801 2.3E-16 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.20.25.490 300 355 2.6E-16 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.20.25.490 1411 1470 7.3E-17 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 1199 1320 6.41E-9 T 14-10-2018 XF_1529 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.150.10.10 1728 1874 1.5E-24 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1220 4f12aaab72aec3fc1045af952b67d65d 707 Gene3D G3DSA:3.90.70.10 1 136 1.7E-38 T 14-10-2018 XF_1220 4f12aaab72aec3fc1045af952b67d65d 707 ProSitePatterns PS00211 ABC transporters family signature. 610 624 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_1220 4f12aaab72aec3fc1045af952b67d65d 707 SMART SM00382 498 682 2.1E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1220 4f12aaab72aec3fc1045af952b67d65d 707 Pfam PF00005 ABC transporter 489 638 6.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_1220 4f12aaab72aec3fc1045af952b67d65d 707 Gene3D G3DSA:1.20.1560.10 143 458 3.5E-65 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XF_1220 4f12aaab72aec3fc1045af952b67d65d 707 Gene3D G3DSA:3.40.50.300 463 701 3.1E-76 T 14-10-2018 XF_1220 4f12aaab72aec3fc1045af952b67d65d 707 SUPERFAMILY SSF90123 138 459 6.8E-61 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XF_1220 4f12aaab72aec3fc1045af952b67d65d 707 SUPERFAMILY SSF52540 464 685 7.48E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1220 4f12aaab72aec3fc1045af952b67d65d 707 Pfam PF03412 Peptidase C39 family 4 128 1.6E-35 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 XF_1220 4f12aaab72aec3fc1045af952b67d65d 707 Pfam PF00664 ABC transporter transmembrane region 159 420 1.1E-35 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XF_2233 c27357ecf5cb43f88dba2cd9ed7cccc8 293 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 14-10-2018 IPR018253 DnaJ domain, conserved site XF_2233 c27357ecf5cb43f88dba2cd9ed7cccc8 293 SUPERFAMILY SSF46565 1 105 5.5E-31 T 14-10-2018 IPR036869 Chaperone J-domain superfamily XF_2233 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Pfam PF01556 DnaJ C terminal domain 138 271 2.1E-24 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal XF_2233 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Pfam PF00226 DnaJ domain 5 66 2.5E-24 T 14-10-2018 IPR001623 DnaJ domain XF_2233 c27357ecf5cb43f88dba2cd9ed7cccc8 293 SUPERFAMILY SSF49493 200 282 3.14E-16 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 XF_2233 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Gene3D G3DSA:2.60.260.20 132 192 1.2E-13 T 14-10-2018 XF_2233 c27357ecf5cb43f88dba2cd9ed7cccc8 293 SUPERFAMILY SSF49493 131 200 1.57E-10 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 XF_2233 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Gene3D G3DSA:1.10.287.110 2 124 5.1E-33 T 14-10-2018 IPR036869 Chaperone J-domain superfamily XF_2233 c27357ecf5cb43f88dba2cd9ed7cccc8 293 SMART SM00271 4 61 3.3E-27 T 14-10-2018 IPR001623 DnaJ domain XF_2233 c27357ecf5cb43f88dba2cd9ed7cccc8 293 PRINTS PR00625 DnaJ domain signature 7 25 5.3E-22 T 14-10-2018 IPR001623 DnaJ domain XF_2233 c27357ecf5cb43f88dba2cd9ed7cccc8 293 PRINTS PR00625 DnaJ domain signature 25 40 5.3E-22 T 14-10-2018 IPR001623 DnaJ domain XF_2233 c27357ecf5cb43f88dba2cd9ed7cccc8 293 PRINTS PR00625 DnaJ domain signature 41 61 5.3E-22 T 14-10-2018 IPR001623 DnaJ domain XF_2233 c27357ecf5cb43f88dba2cd9ed7cccc8 293 PRINTS PR00625 DnaJ domain signature 61 80 5.3E-22 T 14-10-2018 IPR001623 DnaJ domain XF_2233 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Gene3D G3DSA:2.60.260.20 194 271 3.0E-25 T 14-10-2018 XF_2028 afbde4434aaca7d9f00ef0d168670141 185 SUPERFAMILY SSF46689 138 181 1.03E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XF_2028 afbde4434aaca7d9f00ef0d168670141 185 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 XF_2028 afbde4434aaca7d9f00ef0d168670141 185 SMART SM00857 2 136 1.6E-57 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 XF_2028 afbde4434aaca7d9f00ef0d168670141 185 SUPERFAMILY SSF53041 1 135 1.06E-44 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 XF_2028 afbde4434aaca7d9f00ef0d168670141 185 Pfam PF02796 Helix-turn-helix domain of resolvase 138 179 7.2E-7 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 XF_2028 afbde4434aaca7d9f00ef0d168670141 185 Gene3D G3DSA:1.10.10.60 138 184 2.9E-7 T 14-10-2018 XF_2028 afbde4434aaca7d9f00ef0d168670141 185 Pfam PF00239 Resolvase, N terminal domain 3 135 6.5E-46 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 XF_2028 afbde4434aaca7d9f00ef0d168670141 185 Gene3D G3DSA:3.40.50.1390 1 125 4.7E-52 T 14-10-2018 XF_2028 afbde4434aaca7d9f00ef0d168670141 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 XF_1005 18b5afee256402b6b39782bdcc37d6f2 484 Pfam PF00171 Aldehyde dehydrogenase family 74 350 1.7E-12 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XF_1005 18b5afee256402b6b39782bdcc37d6f2 484 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 72 483 40.443 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XF_1005 18b5afee256402b6b39782bdcc37d6f2 484 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 81 471 8.0E-137 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XF_1005 18b5afee256402b6b39782bdcc37d6f2 484 SUPERFAMILY SSF53720 71 483 2.23E-109 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XF_1005 18b5afee256402b6b39782bdcc37d6f2 484 Gene3D G3DSA:3.40.309.10 293 441 2.7E-156 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XF_1005 18b5afee256402b6b39782bdcc37d6f2 484 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 390 411 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XF_1005 18b5afee256402b6b39782bdcc37d6f2 484 Gene3D G3DSA:3.40.605.10 85 478 2.7E-156 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XF_1521 cbf31f40e31294b56a3bf62c83bfc0cd 132 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.0E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_1521 cbf31f40e31294b56a3bf62c83bfc0cd 132 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_1521 cbf31f40e31294b56a3bf62c83bfc0cd 132 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 6.7E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 SUPERFAMILY SSF55785 94 221 1.41E-25 T 14-10-2018 IPR035965 PAS domain superfamily XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 Gene3D G3DSA:3.30.450.20 107 219 6.6E-22 T 14-10-2018 XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 471 1.4E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 Pfam PF08448 PAS fold 116 223 1.0E-11 T 14-10-2018 IPR013656 PAS fold-4 XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 SUPERFAMILY SSF55785 12 105 1.53E-7 T 14-10-2018 IPR035965 PAS domain superfamily XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 SMART SM00091 109 175 0.0047 T 14-10-2018 IPR000014 PAS domain XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 SMART SM00387 362 475 2.6E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 Gene3D G3DSA:3.30.450.20 3 106 1.3E-11 T 14-10-2018 XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 SMART SM00086 181 223 8.3E-5 T 14-10-2018 IPR001610 PAC motif XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 313 2.9E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 472 3.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 427 3.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 3.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 3.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 SUPERFAMILY SSF47384 237 313 1.39E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 Gene3D G3DSA:3.30.565.10 315 474 6.2E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 Gene3D G3DSA:1.10.287.130 220 313 7.4E-19 T 14-10-2018 XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 SUPERFAMILY SSF55874 305 471 2.36E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 105 228 1.6E-13 T 14-10-2018 IPR000014 PAS domain XF_0853 da1de489f0b6ba4f22374a954f3fe8b9 499 SMART SM00388 250 316 3.9E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_2725 f8248ad72747774c2d80a134ee61e8a3 1007 Pfam PF04851 Type III restriction enzyme, res subunit 292 460 5.8E-32 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XF_2725 f8248ad72747774c2d80a134ee61e8a3 1007 SUPERFAMILY SSF52540 249 460 7.58E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2725 f8248ad72747774c2d80a134ee61e8a3 1007 SMART SM00487 289 490 1.4E-18 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_2725 f8248ad72747774c2d80a134ee61e8a3 1007 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 37 224 4.1E-46 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 XF_2725 f8248ad72747774c2d80a134ee61e8a3 1007 Gene3D G3DSA:1.20.58.2040 755 858 9.6E-29 T 14-10-2018 XF_2725 f8248ad72747774c2d80a134ee61e8a3 1007 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 751 1003 1.1E-71 T 14-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal XF_2725 f8248ad72747774c2d80a134ee61e8a3 1007 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 43 748 2.2E-168 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 XF_2725 f8248ad72747774c2d80a134ee61e8a3 1007 Gene3D G3DSA:3.90.640.50 63 135 3.0E-98 T 14-10-2018 XF_2725 f8248ad72747774c2d80a134ee61e8a3 1007 Gene3D G3DSA:3.90.1570.50 37 285 3.0E-98 T 14-10-2018 XF_2725 f8248ad72747774c2d80a134ee61e8a3 1007 Gene3D G3DSA:3.40.50.300 488 754 3.2E-93 T 14-10-2018 XF_2725 f8248ad72747774c2d80a134ee61e8a3 1007 Gene3D G3DSA:3.40.50.300 292 487 4.2E-65 T 14-10-2018 XF_0233 d53d2d9b6c73972311999e080c89fd24 215 Gene3D G3DSA:3.30.300.70 17 102 8.7E-18 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily XF_0233 d53d2d9b6c73972311999e080c89fd24 215 SUPERFAMILY SSF74942 106 175 5.36E-11 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily XF_0233 d53d2d9b6c73972311999e080c89fd24 215 Pfam PF02576 RimP N-terminal domain 27 105 3.1E-26 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal XF_0233 d53d2d9b6c73972311999e080c89fd24 215 Pfam PF17384 RimP C-terminal SH3 domain 108 175 4.1E-19 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal XF_0233 d53d2d9b6c73972311999e080c89fd24 215 SUPERFAMILY SSF75420 23 105 9.02E-20 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily XF_0233 d53d2d9b6c73972311999e080c89fd24 215 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 22 175 21.898 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 XF_0354 b2e0807d5b46125af57f51495928e189 718 SUPERFAMILY SSF52540 463 679 3.85E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0354 b2e0807d5b46125af57f51495928e189 718 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 37 686 1.5E-210 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 XF_0354 b2e0807d5b46125af57f51495928e189 718 SMART SM00487 276 470 1.8E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_0354 b2e0807d5b46125af57f51495928e189 718 SUPERFAMILY SSF50249 16 183 1.88E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_0354 b2e0807d5b46125af57f51495928e189 718 SUPERFAMILY SSF52540 196 464 3.76E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0354 b2e0807d5b46125af57f51495928e189 718 Pfam PF00271 Helicase conserved C-terminal domain 534 613 8.4E-17 T 14-10-2018 IPR001650 Helicase, C-terminal XF_0354 b2e0807d5b46125af57f51495928e189 718 Pfam PF17191 RecG wedge domain 24 181 1.3E-12 T 14-10-2018 IPR033454 RecG, wedge domain XF_0354 b2e0807d5b46125af57f51495928e189 718 Gene3D G3DSA:3.40.50.300 468 655 4.2E-54 T 14-10-2018 XF_0354 b2e0807d5b46125af57f51495928e189 718 SMART SM00490 530 614 8.3E-23 T 14-10-2018 IPR001650 Helicase, C-terminal XF_0354 b2e0807d5b46125af57f51495928e189 718 Pfam PF00270 DEAD/DEAH box helicase 282 416 2.6E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XF_0354 b2e0807d5b46125af57f51495928e189 718 Gene3D G3DSA:3.40.50.300 220 461 5.0E-76 T 14-10-2018 XF_0354 b2e0807d5b46125af57f51495928e189 718 Gene3D G3DSA:2.40.50.140 55 149 4.5E-8 T 14-10-2018 XF_1051 cdeb057b64db5d7be7a1a148330c14ac 185 Pfam PF01765 Ribosome recycling factor 20 183 5.5E-62 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 XF_1051 cdeb057b64db5d7be7a1a148330c14ac 185 SUPERFAMILY SSF55194 1 185 9.42E-69 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 XF_1051 cdeb057b64db5d7be7a1a148330c14ac 185 Gene3D G3DSA:1.10.132.20 12 182 2.3E-66 T 14-10-2018 XF_1051 cdeb057b64db5d7be7a1a148330c14ac 185 Gene3D G3DSA:3.30.1360.40 31 105 2.3E-66 T 14-10-2018 XF_1051 cdeb057b64db5d7be7a1a148330c14ac 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 4.4E-70 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 XF_1051 cdeb057b64db5d7be7a1a148330c14ac 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.113 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 XF_1289 03686d711e87928344d58cb1cc376339 295 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 32 288 3.7E-129 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XF_1289 03686d711e87928344d58cb1cc376339 295 SUPERFAMILY SSF51569 18 289 1.28E-105 T 14-10-2018 XF_1289 03686d711e87928344d58cb1cc376339 295 Pfam PF00793 DAHP synthetase I family 25 284 3.5E-65 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XF_1289 03686d711e87928344d58cb1cc376339 295 Gene3D G3DSA:3.20.20.70 15 294 7.7E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_1289 03686d711e87928344d58cb1cc376339 295 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 27 289 52.127 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XF_1211 ce7a89bcc398cae5dd22145e67cf9150 335 Gene3D G3DSA:3.90.110.10 164 335 1.0E-59 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 XF_1211 ce7a89bcc398cae5dd22145e67cf9150 335 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 12 157 7.9E-36 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 XF_1211 ce7a89bcc398cae5dd22145e67cf9150 335 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 166 329 8.9E-29 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 XF_1211 ce7a89bcc398cae5dd22145e67cf9150 335 Hamap MF_01517 Malate dehydrogenase [mdh]. 8 334 54.892 T 14-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 XF_1211 ce7a89bcc398cae5dd22145e67cf9150 335 SUPERFAMILY SSF56327 166 334 4.17E-57 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 XF_1211 ce7a89bcc398cae5dd22145e67cf9150 335 PIRSF PIRSF000102 8 333 1.9E-62 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 XF_1211 ce7a89bcc398cae5dd22145e67cf9150 335 SUPERFAMILY SSF51735 11 164 1.11E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1211 ce7a89bcc398cae5dd22145e67cf9150 335 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 10 328 6.9E-140 T 14-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 XF_1211 ce7a89bcc398cae5dd22145e67cf9150 335 Gene3D G3DSA:3.40.50.720 5 163 1.1E-56 T 14-10-2018 XF_1302 356f416effa94cbb719604274ead0e2b 286 Pfam PF00005 ABC transporter 47 196 2.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_1302 356f416effa94cbb719604274ead0e2b 286 SMART SM00382 54 244 4.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1302 356f416effa94cbb719604274ead0e2b 286 SUPERFAMILY SSF52540 30 255 4.3E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1302 356f416effa94cbb719604274ead0e2b 286 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_1302 356f416effa94cbb719604274ead0e2b 286 Gene3D G3DSA:3.40.50.300 27 283 9.5E-61 T 14-10-2018 XF_0049 f3b8d56147e47d70d30fbbd3994f4ca1 469 SUPERFAMILY SSF51246 345 458 3.77E-42 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 XF_0049 f3b8d56147e47d70d30fbbd3994f4ca1 469 Gene3D G3DSA:3.40.50.20 15 99 1.5E-34 T 14-10-2018 XF_0049 f3b8d56147e47d70d30fbbd3994f4ca1 469 SUPERFAMILY SSF52440 8 127 6.12E-48 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XF_0049 f3b8d56147e47d70d30fbbd3994f4ca1 469 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 300 307 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XF_0049 f3b8d56147e47d70d30fbbd3994f4ca1 469 Pfam PF02785 Biotin carboxylase C-terminal domain 350 455 1.6E-37 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XF_0049 f3b8d56147e47d70d30fbbd3994f4ca1 469 SUPERFAMILY SSF56059 97 357 9.02E-67 T 14-10-2018 XF_0049 f3b8d56147e47d70d30fbbd3994f4ca1 469 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 15 459 8.0E-229 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 XF_0049 f3b8d56147e47d70d30fbbd3994f4ca1 469 Gene3D G3DSA:3.30.1490.20 145 217 4.8E-153 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XF_0049 f3b8d56147e47d70d30fbbd3994f4ca1 469 Gene3D G3DSA:3.30.470.20 100 445 4.8E-153 T 14-10-2018 XF_0049 f3b8d56147e47d70d30fbbd3994f4ca1 469 Pfam PF00289 Biotin carboxylase, N-terminal domain 15 124 5.8E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XF_0049 f3b8d56147e47d70d30fbbd3994f4ca1 469 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 168 182 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XF_0049 f3b8d56147e47d70d30fbbd3994f4ca1 469 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 337 2.5E-83 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XF_0049 f3b8d56147e47d70d30fbbd3994f4ca1 469 SMART SM00878 350 455 2.5E-62 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XF_0705 9f412d12943091509d9f7f6a49056679 845 SMART SM00885 374 533 1.6E-49 T 14-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XF_0705 9f412d12943091509d9f7f6a49056679 845 Pfam PF03288 Poxvirus D5 protein-like 753 820 2.6E-6 T 14-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal XF_0705 9f412d12943091509d9f7f6a49056679 845 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 482 804 2.5E-80 T 14-10-2018 IPR006500 DNA primase, phage/plasmid XF_0705 9f412d12943091509d9f7f6a49056679 845 SUPERFAMILY SSF52540 529 691 4.63E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0705 9f412d12943091509d9f7f6a49056679 845 Pfam PF08706 D5 N terminal like 375 532 6.8E-35 T 14-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XF_1467 91a091bb6e16ebf3844c5909e465d57e 298 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 286 4.4E-127 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_1467 91a091bb6e16ebf3844c5909e465d57e 298 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 284 37.841 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_1467 91a091bb6e16ebf3844c5909e465d57e 298 Gene3D G3DSA:3.90.226.10 28 289 2.2E-83 T 14-10-2018 XF_1467 91a091bb6e16ebf3844c5909e465d57e 298 SUPERFAMILY SSF52096 28 287 2.98E-84 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XF_1467 91a091bb6e16ebf3844c5909e465d57e 298 Pfam PF01039 Carboxyl transferase domain 126 243 5.9E-15 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 XF_1467 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 254 263 3.8E-41 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_1467 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 132 146 3.8E-41 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_1467 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 166 184 3.8E-41 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_1467 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 203 220 3.8E-41 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_1467 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 232 243 3.8E-41 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_1553 918102962af020685ab9ba6e70e416d7 532 Gene3D G3DSA:1.20.200.10 195 523 1.3E-151 T 14-10-2018 XF_1553 918102962af020685ab9ba6e70e416d7 532 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 89 527 1.1E-115 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XF_1553 918102962af020685ab9ba6e70e416d7 532 Gene3D G3DSA:1.10.40.30 459 522 1.3E-151 T 14-10-2018 XF_1553 918102962af020685ab9ba6e70e416d7 532 PRINTS PR00149 Fumarate lyase superfamily signature 240 258 9.8E-18 T 14-10-2018 IPR000362 Fumarate lyase family XF_1553 918102962af020685ab9ba6e70e416d7 532 PRINTS PR00149 Fumarate lyase superfamily signature 194 212 9.8E-18 T 14-10-2018 IPR000362 Fumarate lyase family XF_1553 918102962af020685ab9ba6e70e416d7 532 PRINTS PR00149 Fumarate lyase superfamily signature 371 387 9.8E-18 T 14-10-2018 IPR000362 Fumarate lyase family XF_1553 918102962af020685ab9ba6e70e416d7 532 PRINTS PR00149 Fumarate lyase superfamily signature 328 355 9.8E-18 T 14-10-2018 IPR000362 Fumarate lyase family XF_1553 918102962af020685ab9ba6e70e416d7 532 ProSitePatterns PS00163 Fumarate lyases signature. 371 380 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 XF_1553 918102962af020685ab9ba6e70e416d7 532 Pfam PF08328 Adenylosuccinate lyase C-terminal 408 522 8.5E-48 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 XF_1553 918102962af020685ab9ba6e70e416d7 532 Gene3D G3DSA:1.10.275.10 69 194 5.2E-42 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal XF_1553 918102962af020685ab9ba6e70e416d7 532 SUPERFAMILY SSF48557 78 516 1.32E-97 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 XF_1553 918102962af020685ab9ba6e70e416d7 532 Pfam PF00206 Lyase 91 389 4.7E-59 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal XF_2545 6361074335126cd87764bddcb2e71a0a 497 Gene3D G3DSA:1.10.10.60 437 497 2.7E-16 T 14-10-2018 XF_2545 6361074335126cd87764bddcb2e71a0a 497 Gene3D G3DSA:3.40.50.300 160 338 1.3E-60 T 14-10-2018 XF_2545 6361074335126cd87764bddcb2e71a0a 497 Gene3D G3DSA:1.10.8.60 339 415 3.1E-21 T 14-10-2018 XF_2545 6361074335126cd87764bddcb2e71a0a 497 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 192 205 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XF_2545 6361074335126cd87764bddcb2e71a0a 497 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 381 390 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site XF_2545 6361074335126cd87764bddcb2e71a0a 497 Pfam PF02954 Bacterial regulatory protein, Fis family 454 494 2.8E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XF_2545 6361074335126cd87764bddcb2e71a0a 497 SUPERFAMILY SSF52540 169 409 5.99E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2545 6361074335126cd87764bddcb2e71a0a 497 SMART SM00448 32 143 4.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2545 6361074335126cd87764bddcb2e71a0a 497 SUPERFAMILY SSF52172 31 212 1.85E-41 T 14-10-2018 IPR011006 CheY-like superfamily XF_2545 6361074335126cd87764bddcb2e71a0a 497 SUPERFAMILY SSF46689 382 496 7.17E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XF_2545 6361074335126cd87764bddcb2e71a0a 497 Pfam PF00158 Sigma-54 interaction domain 169 334 1.4E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 XF_2545 6361074335126cd87764bddcb2e71a0a 497 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 460 477 2.6E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XF_2545 6361074335126cd87764bddcb2e71a0a 497 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 477 497 2.6E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XF_2545 6361074335126cd87764bddcb2e71a0a 497 Pfam PF00072 Response regulator receiver domain 35 143 4.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2545 6361074335126cd87764bddcb2e71a0a 497 SMART SM00382 188 331 8.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_2545 6361074335126cd87764bddcb2e71a0a 497 Gene3D G3DSA:3.40.50.2300 25 159 1.1E-32 T 14-10-2018 XF_1164 043aeec3120dec31b9af43c1b6d30868 179 Pfam PF00281 Ribosomal protein L5 24 80 4.3E-26 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1164 043aeec3120dec31b9af43c1b6d30868 179 SUPERFAMILY SSF55282 3 179 7.77E-74 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1164 043aeec3120dec31b9af43c1b6d30868 179 Gene3D G3DSA:3.30.1440.10 1 179 4.7E-74 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1164 043aeec3120dec31b9af43c1b6d30868 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1164 043aeec3120dec31b9af43c1b6d30868 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 41.91 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1164 043aeec3120dec31b9af43c1b6d30868 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.2E-37 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1164 043aeec3120dec31b9af43c1b6d30868 179 PIRSF PIRSF002161 1 179 1.2E-61 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_0229 a60dd19357a5d221770db02cb0748f44 246 SUPERFAMILY SSF51621 1 244 5.5E-93 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XF_0229 a60dd19357a5d221770db02cb0748f44 246 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 244 3.6E-93 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XF_0229 a60dd19357a5d221770db02cb0748f44 246 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 1 244 37.129 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XF_0229 a60dd19357a5d221770db02cb0748f44 246 Gene3D G3DSA:3.20.20.60 1 246 1.6E-94 T 14-10-2018 XF_0229 a60dd19357a5d221770db02cb0748f44 246 PIRSF PIRSF000388 1 246 5.2E-90 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XF_0229 a60dd19357a5d221770db02cb0748f44 246 Pfam PF02548 Ketopantoate hydroxymethyltransferase 1 239 1.5E-96 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XF_0073 37e6afd33a32adbc58da5db1c6fb2de3 434 SUPERFAMILY SSF52540 21 332 1.01E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0073 37e6afd33a32adbc58da5db1c6fb2de3 434 SMART SM00962 79 275 1.3E-109 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XF_0073 37e6afd33a32adbc58da5db1c6fb2de3 434 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 248 261 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XF_0073 37e6afd33a32adbc58da5db1c6fb2de3 434 SMART SM00382 78 256 1.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_0073 37e6afd33a32adbc58da5db1c6fb2de3 434 Pfam PF02978 Signal peptide binding domain 307 406 9.7E-33 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 XF_0073 37e6afd33a32adbc58da5db1c6fb2de3 434 Gene3D G3DSA:3.40.50.300 69 264 7.1E-112 T 14-10-2018 XF_0073 37e6afd33a32adbc58da5db1c6fb2de3 434 SUPERFAMILY SSF47446 307 409 3.92E-37 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 XF_0073 37e6afd33a32adbc58da5db1c6fb2de3 434 Pfam PF00448 SRP54-type protein, GTPase domain 79 274 2.0E-72 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XF_0073 37e6afd33a32adbc58da5db1c6fb2de3 434 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 1 418 31.593 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 XF_0073 37e6afd33a32adbc58da5db1c6fb2de3 434 SMART SM00963 1 65 1.6E-15 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XF_0073 37e6afd33a32adbc58da5db1c6fb2de3 434 TIGRFAM TIGR00959 ffh: signal recognition particle protein 1 408 6.1E-165 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 XF_0073 37e6afd33a32adbc58da5db1c6fb2de3 434 Gene3D G3DSA:1.20.120.140 1 285 7.1E-112 T 14-10-2018 XF_0073 37e6afd33a32adbc58da5db1c6fb2de3 434 Gene3D G3DSA:1.10.260.30 307 430 1.4E-40 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 XF_0073 37e6afd33a32adbc58da5db1c6fb2de3 434 Pfam PF02881 SRP54-type protein, helical bundle domain 1 61 6.0E-14 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Pfam PF02824 TGS domain 2 62 3.5E-9 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.30.54.20 131 188 3.9E-59 T 14-10-2018 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SUPERFAMILY SSF55681 244 527 1.57E-93 T 14-10-2018 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SUPERFAMILY SSF55186 65 242 9.16E-62 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.40.50.800 533 634 1.2E-32 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SMART SM00863 171 220 1.9E-20 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 2.0E-217 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 1.4E-14 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.30.930.10 224 532 3.0E-123 T 14-10-2018 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 7.9E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 7.9E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 7.9E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 7.9E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 7.9E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.30.980.10 70 223 3.9E-59 T 14-10-2018 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.10.20.30 1 64 3.4E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 530 1.6E-40 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 33.582 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Pfam PF03129 Anticodon binding domain 542 631 6.1E-22 T 14-10-2018 IPR004154 Anticodon-binding XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SUPERFAMILY SSF81271 2 62 8.17E-12 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XF_0736 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SUPERFAMILY SSF52954 530 632 1.31E-32 T 14-10-2018 XF_0656 a089284b025002405a898d7caaeb0cd3 437 Pfam PF00375 Sodium:dicarboxylate symporter family 13 415 6.4E-112 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 XF_0656 a089284b025002405a898d7caaeb0cd3 437 SUPERFAMILY SSF118215 12 415 1.26E-100 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XF_0656 a089284b025002405a898d7caaeb0cd3 437 Gene3D G3DSA:1.10.3860.10 1 431 5.4E-116 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XF_0656 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 1.1E-25 T 14-10-2018 XF_0656 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.1E-25 T 14-10-2018 XF_0656 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 1.1E-25 T 14-10-2018 XF_0656 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 1.1E-25 T 14-10-2018 XF_0656 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 1.1E-25 T 14-10-2018 XF_0656 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 1.1E-25 T 14-10-2018 XF_0656 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 1.1E-25 T 14-10-2018 XF_0656 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 1.1E-25 T 14-10-2018 XF_0731 f4c34aabcf640f58c8f4472a98523c67 160 PIRSF PIRSF029208 25 159 9.3E-58 T 14-10-2018 IPR016912 Bacteriophage P2, GpU XF_0731 f4c34aabcf640f58c8f4472a98523c67 160 Pfam PF06995 Phage P2 GpU 33 152 7.2E-39 T 14-10-2018 IPR009734 Myoviridae, GpU XF_2481 f4c34aabcf640f58c8f4472a98523c67 160 PIRSF PIRSF029208 25 159 9.3E-58 T 14-10-2018 IPR016912 Bacteriophage P2, GpU XF_2481 f4c34aabcf640f58c8f4472a98523c67 160 Pfam PF06995 Phage P2 GpU 33 152 7.2E-39 T 14-10-2018 IPR009734 Myoviridae, GpU XF_1280 084d2ccbeb31794700de3842eb38d0d8 453 Pfam PF00571 CBS domain 230 284 0.003 T 14-10-2018 IPR000644 CBS domain XF_1280 084d2ccbeb31794700de3842eb38d0d8 453 Pfam PF00571 CBS domain 298 345 7.1E-8 T 14-10-2018 IPR000644 CBS domain XF_1280 084d2ccbeb31794700de3842eb38d0d8 453 SUPERFAMILY SSF56176 357 442 4.36E-24 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XF_1280 084d2ccbeb31794700de3842eb38d0d8 453 Gene3D G3DSA:3.10.580.10 206 354 1.6E-39 T 14-10-2018 XF_1280 084d2ccbeb31794700de3842eb38d0d8 453 SMART SM00116 298 346 0.0052 T 14-10-2018 IPR000644 CBS domain XF_1280 084d2ccbeb31794700de3842eb38d0d8 453 SMART SM00116 236 285 0.66 T 14-10-2018 IPR000644 CBS domain XF_1280 084d2ccbeb31794700de3842eb38d0d8 453 Pfam PF03471 Transporter associated domain 364 442 3.8E-21 T 14-10-2018 IPR005170 Transporter-associated domain XF_1280 084d2ccbeb31794700de3842eb38d0d8 453 Pfam PF01595 Domain of unknown function DUF21 20 212 3.4E-45 T 14-10-2018 IPR002550 CNNM, transmembrane domain XF_1280 084d2ccbeb31794700de3842eb38d0d8 453 SMART SM01091 362 443 8.4E-32 T 14-10-2018 IPR005170 Transporter-associated domain XF_1280 084d2ccbeb31794700de3842eb38d0d8 453 Gene3D G3DSA:3.30.465.10 355 443 7.3E-36 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XF_1280 084d2ccbeb31794700de3842eb38d0d8 453 SUPERFAMILY SSF54631 214 347 5.68E-27 T 14-10-2018 XF_2607 0116a24ca284c5b8283f6620ee51065b 1132 Gene3D G3DSA:2.40.50.140 31 124 1.5E-31 T 14-10-2018 XF_2607 0116a24ca284c5b8283f6620ee51065b 1132 Pfam PF10150 Ribonuclease E/G family 120 389 3.3E-96 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 XF_2607 0116a24ca284c5b8283f6620ee51065b 1132 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 1.7E-163 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 XF_2607 0116a24ca284c5b8283f6620ee51065b 1132 Pfam PF00575 S1 RNA binding domain 36 117 1.8E-11 T 14-10-2018 IPR003029 S1 domain GO:0003676 XF_2607 0116a24ca284c5b8283f6620ee51065b 1132 SUPERFAMILY SSF50249 40 124 3.77E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2607 0116a24ca284c5b8283f6620ee51065b 1132 Gene3D G3DSA:3.40.1260.20 399 507 3.6E-35 T 14-10-2018 XF_2607 0116a24ca284c5b8283f6620ee51065b 1132 Hamap MF_00970 Ribonuclease E [rne]. 1 1054 31.841 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 XF_2607 0116a24ca284c5b8283f6620ee51065b 1132 SMART SM00316 37 118 8.2E-9 T 14-10-2018 IPR022967 RNA-binding domain, S1 XF_1152 c50eb11b047ddab1431a85cdf69b79cf 210 SUPERFAMILY SSF50447 1 209 8.03E-75 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XF_1152 c50eb11b047ddab1431a85cdf69b79cf 210 Pfam PF00297 Ribosomal protein L3 100 182 2.0E-13 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1152 c50eb11b047ddab1431a85cdf69b79cf 210 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 208 37.884 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1152 c50eb11b047ddab1431a85cdf69b79cf 210 Gene3D G3DSA:2.40.30.10 130 210 2.2E-14 T 14-10-2018 XF_1152 c50eb11b047ddab1431a85cdf69b79cf 210 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site XF_1152 c50eb11b047ddab1431a85cdf69b79cf 210 Gene3D G3DSA:2.40.50.620 31 95 2.5E-15 T 14-10-2018 XF_1152 c50eb11b047ddab1431a85cdf69b79cf 210 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 2 205 4.5E-84 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2127 d4fd32123f7475aa5ec0acb2ebd47c49 339 Pfam PF00717 Peptidase S24-like 243 315 1.6E-10 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XF_2127 d4fd32123f7475aa5ec0acb2ebd47c49 339 SMART SM00530 107 166 0.42 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_2127 d4fd32123f7475aa5ec0acb2ebd47c49 339 SMART SM00530 14 69 0.05 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_2127 d4fd32123f7475aa5ec0acb2ebd47c49 339 Gene3D G3DSA:1.10.260.40 91 177 7.7E-11 T 14-10-2018 XF_2127 d4fd32123f7475aa5ec0acb2ebd47c49 339 Gene3D G3DSA:1.10.260.40 13 83 2.3E-5 T 14-10-2018 XF_2127 d4fd32123f7475aa5ec0acb2ebd47c49 339 SUPERFAMILY SSF51306 221 336 2.62E-14 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XF_2127 d4fd32123f7475aa5ec0acb2ebd47c49 339 SUPERFAMILY SSF47413 23 75 1.38E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_2127 d4fd32123f7475aa5ec0acb2ebd47c49 339 SUPERFAMILY SSF47413 96 170 2.43E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_1540 0eaa274e79915a4699f8d3a1cb9bb11e 229 SMART SM00100 17 136 3.1E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain XF_1540 0eaa274e79915a4699f8d3a1cb9bb11e 229 Pfam PF00325 Bacterial regulatory proteins, crp family 185 216 8.3E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XF_1540 0eaa274e79915a4699f8d3a1cb9bb11e 229 ProSitePatterns PS00042 Crp-type HTH domain signature. 187 210 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 XF_1540 0eaa274e79915a4699f8d3a1cb9bb11e 229 SMART SM00419 179 227 2.5E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XF_1540 0eaa274e79915a4699f8d3a1cb9bb11e 229 Gene3D G3DSA:1.10.10.10 158 226 2.0E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1540 0eaa274e79915a4699f8d3a1cb9bb11e 229 SUPERFAMILY SSF46785 158 226 1.12E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_1540 0eaa274e79915a4699f8d3a1cb9bb11e 229 Pfam PF00027 Cyclic nucleotide-binding domain 35 122 4.3E-18 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain XF_1540 0eaa274e79915a4699f8d3a1cb9bb11e 229 Gene3D G3DSA:2.60.120.10 24 157 8.6E-49 T 14-10-2018 IPR014710 RmlC-like jelly roll fold XF_1540 0eaa274e79915a4699f8d3a1cb9bb11e 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 201 216 2.5E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XF_1540 0eaa274e79915a4699f8d3a1cb9bb11e 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 185 201 2.5E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XF_1540 0eaa274e79915a4699f8d3a1cb9bb11e 229 SUPERFAMILY SSF51206 23 154 3.27E-24 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like XF_2248 c504121791261e1d30739397c72c582b 243 Pfam PF02565 Recombination protein O C terminal 84 231 3.8E-20 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 XF_2248 c504121791261e1d30739397c72c582b 243 Pfam PF11967 Recombination protein O N terminal 5 78 5.3E-17 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal XF_2248 c504121791261e1d30739397c72c582b 243 SUPERFAMILY SSF50249 5 78 3.6E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2248 c504121791261e1d30739397c72c582b 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 153 5.4E-21 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 XF_2248 c504121791261e1d30739397c72c582b 243 Hamap MF_00201 DNA repair protein RecO [recO]. 2 236 18.362 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 XF_2248 c504121791261e1d30739397c72c582b 243 Gene3D G3DSA:1.20.1440.120 82 242 3.5E-38 T 14-10-2018 XF_2248 c504121791261e1d30739397c72c582b 243 Gene3D G3DSA:2.40.50.140 4 80 3.8E-24 T 14-10-2018 XF_0869 796a24685e68de9923bf9ef877a97547 551 SUPERFAMILY SSF47005 237 279 2.88E-11 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XF_0869 796a24685e68de9923bf9ef877a97547 551 Gene3D G3DSA:3.30.559.10 302 551 7.2E-94 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XF_0869 796a24685e68de9923bf9ef877a97547 551 Pfam PF02817 e3 binding domain 241 275 9.2E-15 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 XF_0869 796a24685e68de9923bf9ef877a97547 551 Gene3D G3DSA:2.40.50.100 113 189 1.2E-19 T 14-10-2018 XF_0869 796a24685e68de9923bf9ef877a97547 551 Gene3D G3DSA:2.40.50.100 4 82 2.2E-20 T 14-10-2018 XF_0869 796a24685e68de9923bf9ef877a97547 551 Gene3D G3DSA:4.10.320.10 241 283 1.2E-16 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XF_0869 796a24685e68de9923bf9ef877a97547 551 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 317 550 4.1E-80 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 XF_0869 796a24685e68de9923bf9ef877a97547 551 SUPERFAMILY SSF51230 111 195 1.44E-20 T 14-10-2018 IPR011053 Single hybrid motif XF_0869 796a24685e68de9923bf9ef877a97547 551 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XF_0869 796a24685e68de9923bf9ef877a97547 551 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 89 551 1.7E-235 T 14-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 XF_0869 796a24685e68de9923bf9ef877a97547 551 Pfam PF00364 Biotin-requiring enzyme 9 77 6.9E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment XF_0869 796a24685e68de9923bf9ef877a97547 551 Pfam PF00364 Biotin-requiring enzyme 113 184 4.9E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment XF_0869 796a24685e68de9923bf9ef877a97547 551 SUPERFAMILY SSF51230 3 90 3.14E-22 T 14-10-2018 IPR011053 Single hybrid motif XF_0869 796a24685e68de9923bf9ef877a97547 551 SUPERFAMILY SSF52777 306 551 1.29E-81 T 14-10-2018 XF_0869 796a24685e68de9923bf9ef877a97547 551 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 135 164 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XF_1941 3aeffe671ac140da5ea6e441635a5e1e 164 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 36 159 9.0E-33 T 14-10-2018 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 XF_1941 3aeffe671ac140da5ea6e441635a5e1e 164 SUPERFAMILY SSF54427 35 158 6.92E-29 T 14-10-2018 IPR032710 NTF2-like domain superfamily XF_1941 3aeffe671ac140da5ea6e441635a5e1e 164 PIRSF PIRSF028470 1 162 1.7E-56 T 14-10-2018 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related XF_1941 3aeffe671ac140da5ea6e441635a5e1e 164 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 36 159 1.2E-26 T 14-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 XF_1941 3aeffe671ac140da5ea6e441635a5e1e 164 Gene3D G3DSA:3.10.450.50 20 162 3.6E-44 T 14-10-2018 XF_2682 e6ffbc9194b2dadff95d2677ed98e6f6 537 Gene3D G3DSA:2.60.40.10 417 537 2.7E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold XF_2682 e6ffbc9194b2dadff95d2677ed98e6f6 537 SUPERFAMILY SSF81296 417 529 5.32E-24 T 14-10-2018 IPR014756 Immunoglobulin E-set XF_2682 e6ffbc9194b2dadff95d2677ed98e6f6 537 PIRSF PIRSF006281 3 530 4.3E-209 T 14-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD XF_2682 e6ffbc9194b2dadff95d2677ed98e6f6 537 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 3 536 59.115 T 14-10-2018 IPR023724 Glucan biosynthesis, MdoD XF_2682 e6ffbc9194b2dadff95d2677ed98e6f6 537 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 46 526 5.5E-192 T 14-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 XF_2682 e6ffbc9194b2dadff95d2677ed98e6f6 537 Gene3D G3DSA:2.70.98.10 45 413 4.2E-153 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 XF_2682 e6ffbc9194b2dadff95d2677ed98e6f6 537 SUPERFAMILY SSF74650 46 415 9.73E-154 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 XF_1965 edae268ad7531dc182611ae1bcb2b6b1 301 Pfam PF00561 alpha/beta hydrolase fold 33 285 2.2E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XF_1965 edae268ad7531dc182611ae1bcb2b6b1 301 Gene3D G3DSA:3.40.50.1820 2 299 8.0E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1965 edae268ad7531dc182611ae1bcb2b6b1 301 SUPERFAMILY SSF53474 5 299 9.15E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1965 edae268ad7531dc182611ae1bcb2b6b1 301 PRINTS PR00412 Epoxide hydrolase signature 38 56 7.6E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 XF_1965 edae268ad7531dc182611ae1bcb2b6b1 301 PRINTS PR00412 Epoxide hydrolase signature 274 296 7.6E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 XF_1965 edae268ad7531dc182611ae1bcb2b6b1 301 PRINTS PR00412 Epoxide hydrolase signature 112 125 7.6E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 XF_0874 b387abda80fd239ee1681cdc74336323 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 235 6.8E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XF_0874 b387abda80fd239ee1681cdc74336323 235 SUPERFAMILY SSF161098 25 220 1.27E-41 T 14-10-2018 IPR035906 MetI-like superfamily XF_0874 b387abda80fd239ee1681cdc74336323 235 Gene3D G3DSA:1.10.3720.10 24 234 2.6E-45 T 14-10-2018 IPR035906 MetI-like superfamily XF_2546 18dc906694abd015a4468ef31f4371d0 629 SUPERFAMILY SSF47384 406 471 7.26E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XF_2546 18dc906694abd015a4468ef31f4371d0 629 Gene3D G3DSA:3.30.450.20 281 383 1.2E-5 T 14-10-2018 XF_2546 18dc906694abd015a4468ef31f4371d0 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 516 621 2.6E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_2546 18dc906694abd015a4468ef31f4371d0 629 Gene3D G3DSA:1.10.287.130 397 467 6.7E-15 T 14-10-2018 XF_2546 18dc906694abd015a4468ef31f4371d0 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 602 9.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_2546 18dc906694abd015a4468ef31f4371d0 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 583 9.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_2546 18dc906694abd015a4468ef31f4371d0 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 569 9.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_2546 18dc906694abd015a4468ef31f4371d0 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 621 9.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_2546 18dc906694abd015a4468ef31f4371d0 629 Gene3D G3DSA:3.30.565.10 468 622 1.1E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_2546 18dc906694abd015a4468ef31f4371d0 629 SUPERFAMILY SSF55874 465 621 5.11E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_2546 18dc906694abd015a4468ef31f4371d0 629 SMART SM00387 515 624 1.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_2546 18dc906694abd015a4468ef31f4371d0 629 SMART SM00388 407 473 6.5E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_2546 18dc906694abd015a4468ef31f4371d0 629 Pfam PF00512 His Kinase A (phospho-acceptor) domain 407 471 8.5E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_0343 604ba9a3605e667eca28349a0cda5f25 389 SUPERFAMILY SSF103647 241 280 9.15E-6 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 XF_0343 604ba9a3605e667eca28349a0cda5f25 389 SUPERFAMILY SSF103088 280 386 1.14E-35 T 14-10-2018 IPR036737 OmpA-like domain superfamily XF_0343 604ba9a3605e667eca28349a0cda5f25 389 Gene3D G3DSA:3.30.1330.60 275 389 1.3E-39 T 14-10-2018 IPR036737 OmpA-like domain superfamily XF_0343 604ba9a3605e667eca28349a0cda5f25 389 Pfam PF00691 OmpA family 285 381 4.9E-23 T 14-10-2018 IPR006665 OmpA-like domain XF_0343 604ba9a3605e667eca28349a0cda5f25 389 Gene3D G3DSA:2.40.160.20 33 215 3.3E-23 T 14-10-2018 XF_0343 604ba9a3605e667eca28349a0cda5f25 389 PRINTS PR01021 OMPA domain signature 286 308 6.9E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XF_0343 604ba9a3605e667eca28349a0cda5f25 389 PRINTS PR01021 OMPA domain signature 316 331 6.9E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XF_0343 604ba9a3605e667eca28349a0cda5f25 389 PRINTS PR01021 OMPA domain signature 331 347 6.9E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XF_0343 604ba9a3605e667eca28349a0cda5f25 389 Pfam PF13505 Outer membrane protein beta-barrel domain 22 192 1.2E-16 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel XF_0343 604ba9a3605e667eca28349a0cda5f25 389 SUPERFAMILY SSF56925 41 185 3.4E-18 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XF_0873 1f4f8a830369a48114e1000344886cba 261 PIRSF PIRSF002854 2 261 2.0E-101 T 14-10-2018 IPR004872 Lipoprotein NlpA family XF_0873 1f4f8a830369a48114e1000344886cba 261 Gene3D G3DSA:3.40.190.10 26 257 1.9E-96 T 14-10-2018 XF_0873 1f4f8a830369a48114e1000344886cba 261 Pfam PF03180 NLPA lipoprotein 26 261 1.2E-98 T 14-10-2018 IPR004872 Lipoprotein NlpA family XF_0873 1f4f8a830369a48114e1000344886cba 261 Gene3D G3DSA:3.40.190.10 107 211 1.9E-96 T 14-10-2018 XF_0873 1f4f8a830369a48114e1000344886cba 261 SUPERFAMILY SSF53850 26 261 1.28E-80 T 14-10-2018 XF_1258 cae7a21c2879641aea7163d781ce6d75 305 Pfam PF00924 Mechanosensitive ion channel 77 274 2.3E-51 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 XF_1258 cae7a21c2879641aea7163d781ce6d75 305 Gene3D G3DSA:2.30.30.60 135 184 2.5E-15 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily XF_1258 cae7a21c2879641aea7163d781ce6d75 305 SUPERFAMILY SSF82689 188 284 1.7E-29 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 XF_1258 cae7a21c2879641aea7163d781ce6d75 305 SUPERFAMILY SSF82861 34 118 1.96E-15 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 XF_1258 cae7a21c2879641aea7163d781ce6d75 305 Gene3D G3DSA:3.30.70.100 187 278 2.6E-26 T 14-10-2018 XF_1258 cae7a21c2879641aea7163d781ce6d75 305 SUPERFAMILY SSF50182 119 185 1.14E-15 T 14-10-2018 IPR010920 LSM domain superfamily XF_1955 03a6e7f1292a6a62397a8fec76f8affa 145 SMART SM00448 21 134 8.3E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1955 03a6e7f1292a6a62397a8fec76f8affa 145 Pfam PF00072 Response regulator receiver domain 23 135 7.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1955 03a6e7f1292a6a62397a8fec76f8affa 145 SUPERFAMILY SSF52172 20 139 4.98E-35 T 14-10-2018 IPR011006 CheY-like superfamily XF_1955 03a6e7f1292a6a62397a8fec76f8affa 145 Gene3D G3DSA:3.40.50.12740 20 144 5.7E-37 T 14-10-2018 XF_0401 6cab8c98c1a6b20b75be703b7903de7c 566 SMART SM00052 314 557 2.6E-11 T 14-10-2018 IPR001633 EAL domain XF_0401 6cab8c98c1a6b20b75be703b7903de7c 566 SUPERFAMILY SSF52172 19 161 6.12E-35 T 14-10-2018 IPR011006 CheY-like superfamily XF_0401 6cab8c98c1a6b20b75be703b7903de7c 566 SMART SM00448 20 133 3.5E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_0401 6cab8c98c1a6b20b75be703b7903de7c 566 Pfam PF00072 Response regulator receiver domain 22 133 2.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_0401 6cab8c98c1a6b20b75be703b7903de7c 566 Pfam PF00990 Diguanylate cyclase, GGDEF domain 161 306 4.5E-7 T 14-10-2018 IPR000160 GGDEF domain XF_0401 6cab8c98c1a6b20b75be703b7903de7c 566 Gene3D G3DSA:3.20.20.450 319 560 2.2E-40 T 14-10-2018 IPR035919 EAL domain superfamily XF_0401 6cab8c98c1a6b20b75be703b7903de7c 566 Gene3D G3DSA:3.30.70.270 163 313 7.0E-13 T 14-10-2018 XF_0401 6cab8c98c1a6b20b75be703b7903de7c 566 Pfam PF00563 EAL domain 325 551 4.4E-35 T 14-10-2018 IPR001633 EAL domain XF_0401 6cab8c98c1a6b20b75be703b7903de7c 566 Gene3D G3DSA:3.40.50.2300 14 162 6.0E-34 T 14-10-2018 XF_0401 6cab8c98c1a6b20b75be703b7903de7c 566 SUPERFAMILY SSF55073 162 312 3.84E-13 T 14-10-2018 IPR029787 Nucleotide cyclase XF_0401 6cab8c98c1a6b20b75be703b7903de7c 566 SUPERFAMILY SSF141868 325 551 3.14E-37 T 14-10-2018 IPR035919 EAL domain superfamily XF_2370 80991a362f9aba7397ebc6e2c83d939b 217 Gene3D G3DSA:3.10.560.10 96 193 2.3E-16 T 14-10-2018 XF_2370 80991a362f9aba7397ebc6e2c83d939b 217 Pfam PF02563 Polysaccharide biosynthesis/export protein 31 105 3.1E-18 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 XF_2370 80991a362f9aba7397ebc6e2c83d939b 217 Pfam PF10531 SLBB domain 112 164 3.9E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_2338 54039d6cce00ef4917ae14ca48a2ec7e 373 Pfam PF02153 Prephenate dehydrogenase 46 251 2.4E-25 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 XF_2338 54039d6cce00ef4917ae14ca48a2ec7e 373 SUPERFAMILY SSF48179 154 254 7.03E-18 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XF_2338 54039d6cce00ef4917ae14ca48a2ec7e 373 Gene3D G3DSA:1.10.3660.10 161 275 3.8E-12 T 14-10-2018 XF_2338 54039d6cce00ef4917ae14ca48a2ec7e 373 Gene3D G3DSA:3.40.50.720 2 159 4.0E-29 T 14-10-2018 XF_2338 54039d6cce00ef4917ae14ca48a2ec7e 373 Gene3D G3DSA:3.30.70.260 296 365 3.8E-8 T 14-10-2018 XF_2338 54039d6cce00ef4917ae14ca48a2ec7e 373 SUPERFAMILY SSF51735 7 151 1.97E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2338 54039d6cce00ef4917ae14ca48a2ec7e 373 SUPERFAMILY SSF55021 296 360 1.66E-8 T 14-10-2018 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 SUPERFAMILY SSF52540 608 844 1.34E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1716 6acacdea584b874b00efcdade16fd1bc 903 Pfam PF00488 MutS domain V 651 843 1.1E-81 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 Pfam PF05188 MutS domain II 171 294 9.3E-30 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 Pfam PF05190 MutS family domain IV 469 559 4.2E-29 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 PIRSF PIRSF037677 22 231 3.4E-25 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 PIRSF PIRSF037677 258 886 7.3E-116 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 49 900 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 49 895 24.613 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 Gene3D G3DSA:1.10.1420.10 308 600 1.3E-94 T 14-10-2018 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 SUPERFAMILY SSF48334 309 606 3.79E-83 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily XF_1716 6acacdea584b874b00efcdade16fd1bc 903 Gene3D G3DSA:3.40.1170.10 43 163 2.9E-48 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 SMART SM00534 648 840 9.1E-107 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 Gene3D G3DSA:3.40.50.300 609 894 5.0E-95 T 14-10-2018 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 Gene3D G3DSA:3.30.420.110 170 302 1.3E-37 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 SUPERFAMILY SSF53150 156 308 1.83E-40 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 SUPERFAMILY SSF55271 44 157 4.84E-42 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 Pfam PF01624 MutS domain I 50 161 1.5E-40 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 729 745 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 Gene3D G3DSA:1.10.1420.10 428 544 1.3E-94 T 14-10-2018 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 SMART SM00533 325 632 1.2E-94 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 XF_1716 6acacdea584b874b00efcdade16fd1bc 903 Pfam PF05192 MutS domain III 311 600 3.1E-39 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 SUPERFAMILY SSF55957 369 462 4.71E-14 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 SUPERFAMILY SSF53738 153 255 1.37E-21 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 369 2.7E-19 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 Gene3D G3DSA:3.30.310.50 377 465 3.0E-15 T 14-10-2018 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 Gene3D G3DSA:3.40.120.10 250 368 5.0E-36 T 14-10-2018 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 9 138 8.0E-33 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 253 6.5E-17 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 1.7E-9 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 1.7E-9 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 1.7E-9 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 Gene3D G3DSA:3.40.120.10 2 150 1.7E-40 T 14-10-2018 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 411 455 1.7E-6 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 SUPERFAMILY SSF53738 259 364 5.89E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 SUPERFAMILY SSF53738 4 139 1.33E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0151 2a0bd71ae038b22daeb6e563bd9f7e48 467 Gene3D G3DSA:3.40.120.10 172 249 2.7E-18 T 14-10-2018 XF_0984 116b245ac748c81f9bc27705fa448bb6 603 SUPERFAMILY SSF56235 37 570 6.56E-168 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XF_0984 116b245ac748c81f9bc27705fa448bb6 603 Pfam PF01019 Gamma-glutamyltranspeptidase 54 570 1.7E-169 T 14-10-2018 XF_0984 116b245ac748c81f9bc27705fa448bb6 603 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 40 569 1.1E-137 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 XF_0984 116b245ac748c81f9bc27705fa448bb6 603 Gene3D G3DSA:1.10.246.130 267 376 1.8E-34 T 14-10-2018 XF_0984 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 402 420 1.6E-65 T 14-10-2018 XF_0984 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 135 153 1.6E-65 T 14-10-2018 XF_0984 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 281 300 1.6E-65 T 14-10-2018 XF_0984 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 443 458 1.6E-65 T 14-10-2018 XF_0984 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 251 267 1.6E-65 T 14-10-2018 XF_0984 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 61 86 1.6E-65 T 14-10-2018 XF_0984 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 378 396 1.6E-65 T 14-10-2018 XF_0984 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 466 483 1.6E-65 T 14-10-2018 XF_0984 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 153 172 1.6E-65 T 14-10-2018 XF_0984 116b245ac748c81f9bc27705fa448bb6 603 Gene3D G3DSA:3.60.20.40 378 571 3.1E-56 T 14-10-2018 XF_0748 c12d07967651c43a08d7a1bf8c008773 351 PIRSF PIRSF028774 1 351 6.1E-160 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 XF_0748 c12d07967651c43a08d7a1bf8c008773 351 Pfam PF01728 FtsJ-like methyltransferase 184 242 8.0E-6 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 XF_0748 c12d07967651c43a08d7a1bf8c008773 351 Gene3D G3DSA:3.30.2300.20 79 173 6.7E-23 T 14-10-2018 XF_0748 c12d07967651c43a08d7a1bf8c008773 351 Gene3D G3DSA:3.30.70.2810 1 78 1.7E-18 T 14-10-2018 XF_0748 c12d07967651c43a08d7a1bf8c008773 351 Gene3D G3DSA:3.40.50.150 174 349 2.8E-52 T 14-10-2018 XF_0748 c12d07967651c43a08d7a1bf8c008773 351 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 349 67.866 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 XF_0748 c12d07967651c43a08d7a1bf8c008773 351 SUPERFAMILY SSF53335 183 293 1.44E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0778 d73a594c67298a086aa1f5242cf352d3 706 Pfam PF01757 Acyltransferase family 21 365 4.4E-28 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 XF_0778 d73a594c67298a086aa1f5242cf352d3 706 SUPERFAMILY SSF52266 455 705 4.1E-5 T 14-10-2018 XF_0552 47f304d8b997c06fd5295b3159ff325d 273 SUPERFAMILY SSF53790 5 225 2.22E-79 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 XF_0552 47f304d8b997c06fd5295b3159ff325d 273 PIRSF PIRSF005917 1 273 1.2E-99 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 XF_0552 47f304d8b997c06fd5295b3159ff325d 273 Gene3D G3DSA:3.40.1010.10 1 113 3.4E-41 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 XF_0552 47f304d8b997c06fd5295b3159ff325d 273 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 227 37.906 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 XF_0552 47f304d8b997c06fd5295b3159ff325d 273 Gene3D G3DSA:3.30.950.10 114 234 8.2E-43 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 XF_0552 47f304d8b997c06fd5295b3159ff325d 273 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 XF_0552 47f304d8b997c06fd5295b3159ff325d 273 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 271 5.3E-85 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 XF_0552 47f304d8b997c06fd5295b3159ff325d 273 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 206 1.3E-27 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 XF_2645 9a3230bd70c481f620729f3c0e78f689 298 Gene3D G3DSA:3.30.230.10 8 174 5.2E-51 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XF_2645 9a3230bd70c481f620729f3c0e78f689 298 SUPERFAMILY SSF54211 20 172 1.06E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_2645 9a3230bd70c481f620729f3c0e78f689 298 Pfam PF08544 GHMP kinases C terminal 223 272 1.2E-4 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain XF_2645 9a3230bd70c481f620729f3c0e78f689 298 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 19 290 2.1E-64 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 XF_2645 9a3230bd70c481f620729f3c0e78f689 298 PIRSF PIRSF010376 16 294 1.8E-76 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 XF_2645 9a3230bd70c481f620729f3c0e78f689 298 SUPERFAMILY SSF55060 175 292 5.04E-22 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XF_2645 9a3230bd70c481f620729f3c0e78f689 298 Gene3D G3DSA:3.30.70.890 176 294 7.6E-21 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XF_2645 9a3230bd70c481f620729f3c0e78f689 298 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 18 286 29.878 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 XF_2645 9a3230bd70c481f620729f3c0e78f689 298 Pfam PF00288 GHMP kinases N terminal domain 101 158 8.4E-9 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 XF_0009 79a85e3f0afcf81b138a1c8ac082b217 221 Gene3D G3DSA:3.30.1150.10 127 221 8.6E-27 T 14-10-2018 XF_0009 79a85e3f0afcf81b138a1c8ac082b217 221 PRINTS PR01374 Gram-negative bacterial tonB protein signature 160 178 6.5E-9 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XF_0009 79a85e3f0afcf81b138a1c8ac082b217 221 PRINTS PR01374 Gram-negative bacterial tonB protein signature 67 77 6.5E-9 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XF_0009 79a85e3f0afcf81b138a1c8ac082b217 221 PRINTS PR01374 Gram-negative bacterial tonB protein signature 139 160 6.5E-9 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XF_0009 79a85e3f0afcf81b138a1c8ac082b217 221 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 145 221 2.5E-24 T 14-10-2018 IPR006260 TonB/TolA, C-terminal XF_0009 79a85e3f0afcf81b138a1c8ac082b217 221 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 144 221 6.7E-24 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 XF_0009 79a85e3f0afcf81b138a1c8ac082b217 221 SUPERFAMILY SSF74653 143 219 1.96E-23 T 14-10-2018 XF_2596 99c542f6c70ff8a2f9a04947caacb3cb 335 SUPERFAMILY SSF53659 1 335 5.95E-124 T 14-10-2018 XF_2596 99c542f6c70ff8a2f9a04947caacb3cb 335 SMART SM01329 4 331 1.3E-180 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XF_2596 99c542f6c70ff8a2f9a04947caacb3cb 335 Gene3D G3DSA:3.40.718.10 1 335 2.5E-141 T 14-10-2018 XF_2596 99c542f6c70ff8a2f9a04947caacb3cb 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 331 8.5E-107 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XF_2596 99c542f6c70ff8a2f9a04947caacb3cb 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 XF_0879 20e513578e5561032c0b2b4d80864d9e 370 Pfam PF13439 Glycosyltransferase Family 4 13 161 2.3E-18 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XF_0879 20e513578e5561032c0b2b4d80864d9e 370 Gene3D G3DSA:3.40.50.2000 171 342 8.0E-34 T 14-10-2018 XF_0879 20e513578e5561032c0b2b4d80864d9e 370 Gene3D G3DSA:3.40.50.2000 1 170 2.0E-15 T 14-10-2018 XF_0879 20e513578e5561032c0b2b4d80864d9e 370 SUPERFAMILY SSF53756 3 361 9.42E-71 T 14-10-2018 XF_0879 20e513578e5561032c0b2b4d80864d9e 370 Pfam PF13692 Glycosyl transferases group 1 185 320 6.2E-21 T 14-10-2018 XF_1183 7c2c835fcb49b76a561c218372d33274 433 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 16 421 2.3E-110 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XF_1183 7c2c835fcb49b76a561c218372d33274 433 SUPERFAMILY SSF48179 209 300 1.7E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XF_1183 7c2c835fcb49b76a561c218372d33274 433 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 16 189 1.6E-29 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XF_1183 7c2c835fcb49b76a561c218372d33274 433 PIRSF PIRSF500136 5 433 8.7E-151 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 XF_1183 7c2c835fcb49b76a561c218372d33274 433 SUPERFAMILY SSF51735 16 199 5.07E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1183 7c2c835fcb49b76a561c218372d33274 433 SMART SM00984 326 426 2.7E-32 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XF_1183 7c2c835fcb49b76a561c218372d33274 433 PIRSF PIRSF000124 15 431 1.4E-47 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XF_1183 7c2c835fcb49b76a561c218372d33274 433 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 211 299 4.6E-23 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XF_1183 7c2c835fcb49b76a561c218372d33274 433 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 326 424 2.5E-20 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XF_1183 7c2c835fcb49b76a561c218372d33274 433 Gene3D G3DSA:3.40.50.720 210 432 1.3E-52 T 14-10-2018 XF_1183 7c2c835fcb49b76a561c218372d33274 433 SUPERFAMILY SSF52413 318 429 3.92E-24 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 XF_1183 7c2c835fcb49b76a561c218372d33274 433 Gene3D G3DSA:3.40.50.720 3 206 3.9E-55 T 14-10-2018 XF_0620 fc469c500ae540497484e2b16f951004 758 Pfam PF13899 Thioredoxin-like 656 733 2.9E-13 T 14-10-2018 XF_0620 fc469c500ae540497484e2b16f951004 758 Pfam PF11412 Disulphide bond corrector protein DsbC 184 300 8.0E-28 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain XF_0620 fc469c500ae540497484e2b16f951004 758 Pfam PF11412 Disulphide bond corrector protein DsbC 26 143 4.2E-29 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain XF_0620 fc469c500ae540497484e2b16f951004 758 SUPERFAMILY SSF74863 184 301 1.83E-29 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XF_0620 fc469c500ae540497484e2b16f951004 758 SUPERFAMILY SSF74863 24 143 1.57E-30 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XF_0620 fc469c500ae540497484e2b16f951004 758 ProSitePatterns PS00194 Thioredoxin family active site. 666 684 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XF_0620 fc469c500ae540497484e2b16f951004 758 Gene3D G3DSA:2.60.40.1250 179 318 5.2E-33 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XF_0620 fc469c500ae540497484e2b16f951004 758 Gene3D G3DSA:2.60.40.1250 20 154 9.5E-35 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XF_0620 fc469c500ae540497484e2b16f951004 758 Gene3D G3DSA:3.40.30.10 648 754 1.1E-10 T 14-10-2018 XF_0620 fc469c500ae540497484e2b16f951004 758 SUPERFAMILY SSF52833 654 753 9.92E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_0308 fd29aab327c64a32101ea7056827b613 435 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 15 435 48.31 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0308 fd29aab327c64a32101ea7056827b613 435 SUPERFAMILY SSF56762 34 435 9.94E-132 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0308 fd29aab327c64a32101ea7056827b613 435 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 61 72 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0308 fd29aab327c64a32101ea7056827b613 435 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 138 435 1.8E-118 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0308 fd29aab327c64a32101ea7056827b613 435 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 24 435 1.3E-180 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0308 fd29aab327c64a32101ea7056827b613 435 Gene3D G3DSA:1.10.645.20 22 435 3.2E-167 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_1678 74519aff46ac2d68684c4193be700541 112 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 15 104 5.3E-26 T 14-10-2018 IPR009241 Toxin HigB-like XF_1573 74519aff46ac2d68684c4193be700541 112 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 15 104 5.3E-26 T 14-10-2018 IPR009241 Toxin HigB-like XF_1312 f317c70eaa394f8223bb5ca602bc85ad 694 SUPERFAMILY SSF56601 257 615 3.62E-94 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XF_1312 f317c70eaa394f8223bb5ca602bc85ad 694 Pfam PF03717 Penicillin-binding Protein dimerisation domain 73 241 9.6E-42 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 XF_1312 f317c70eaa394f8223bb5ca602bc85ad 694 Gene3D G3DSA:3.90.1310.10 74 252 3.0E-43 T 14-10-2018 XF_1312 f317c70eaa394f8223bb5ca602bc85ad 694 Pfam PF00905 Penicillin binding protein transpeptidase domain 274 612 3.2E-67 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XF_1312 f317c70eaa394f8223bb5ca602bc85ad 694 Gene3D G3DSA:3.40.710.10 256 617 3.9E-92 T 14-10-2018 XF_1312 f317c70eaa394f8223bb5ca602bc85ad 694 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 11 619 46.192 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XF_1312 f317c70eaa394f8223bb5ca602bc85ad 694 SUPERFAMILY SSF56519 65 256 1.28E-46 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 XF_1312 f317c70eaa394f8223bb5ca602bc85ad 694 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 27 615 5.8E-211 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XF_1312 f317c70eaa394f8223bb5ca602bc85ad 694 Gene3D G3DSA:3.30.1390.30 93 168 3.0E-43 T 14-10-2018 XF_2439 5445bc23c082f74c146c452af025c1ea 223 Gene3D G3DSA:3.40.50.300 2 223 1.7E-72 T 14-10-2018 XF_2439 5445bc23c082f74c146c452af025c1ea 223 SUPERFAMILY SSF52540 7 221 5.19E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2439 5445bc23c082f74c146c452af025c1ea 223 Pfam PF02224 Cytidylate kinase 9 221 9.4E-67 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 XF_2439 5445bc23c082f74c146c452af025c1ea 223 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.6E-69 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 XF_2439 5445bc23c082f74c146c452af025c1ea 223 Hamap MF_00238 Cytidylate kinase [cmk]. 6 222 30.208 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 Gene3D G3DSA:2.40.30.10 268 354 5.0E-23 T 14-10-2018 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 Gene3D G3DSA:2.40.30.10 356 459 6.3E-33 T 14-10-2018 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 SUPERFAMILY SSF50447 269 356 9.15E-22 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 487 659 36.628 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 PRINTS PR00315 GTP-binding elongation factor signature 55 68 1.0E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 PRINTS PR00315 GTP-binding elongation factor signature 152 163 1.0E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 PRINTS PR00315 GTP-binding elongation factor signature 116 124 1.0E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 PRINTS PR00315 GTP-binding elongation factor signature 136 146 1.0E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 PRINTS PR00315 GTP-binding elongation factor signature 189 198 1.0E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 SUPERFAMILY SSF52540 45 260 2.18E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 SUPERFAMILY SSF52540 485 655 9.88E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 Gene3D G3DSA:3.40.50.300 31 264 4.3E-69 T 14-10-2018 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 Pfam PF01583 Adenylylsulphate kinase 489 641 3.9E-67 T 14-10-2018 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 Gene3D G3DSA:3.40.50.300 465 658 5.9E-72 T 14-10-2018 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 45 488 52.36 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 SUPERFAMILY SSF50465 357 458 3.02E-31 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 109 124 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 476 654 1.6E-71 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 Pfam PF00009 Elongation factor Tu GTP binding domain 53 252 8.1E-41 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_1501 ff8d215641c28466d50c8c30024bd5f7 660 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 54 458 8.7E-195 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XF_2009 a41924bbb9a396c4846d38c7326cc2b2 446 SMART SM01011 11 145 1.1E-68 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 XF_2009 a41924bbb9a396c4846d38c7326cc2b2 446 SUPERFAMILY SSF53092 11 183 3.14E-56 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XF_2009 a41924bbb9a396c4846d38c7326cc2b2 446 Pfam PF05195 Aminopeptidase P, N-terminal domain 16 135 2.4E-39 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 XF_2009 a41924bbb9a396c4846d38c7326cc2b2 446 Gene3D G3DSA:3.40.350.10 12 180 3.5E-57 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XF_2009 a41924bbb9a396c4846d38c7326cc2b2 446 Pfam PF00557 Metallopeptidase family M24 191 421 5.5E-57 T 14-10-2018 IPR000994 Peptidase M24 XF_2009 a41924bbb9a396c4846d38c7326cc2b2 446 SUPERFAMILY SSF55920 186 442 8.11E-78 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like XF_2009 a41924bbb9a396c4846d38c7326cc2b2 446 PRINTS PR00599 Methionine aminopeptidase-1 signature 261 277 2.7E-6 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XF_2009 a41924bbb9a396c4846d38c7326cc2b2 446 PRINTS PR00599 Methionine aminopeptidase-1 signature 379 391 2.7E-6 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XF_2009 a41924bbb9a396c4846d38c7326cc2b2 446 Gene3D G3DSA:3.90.230.10 181 445 2.3E-87 T 14-10-2018 XF_1893 8be2c2fb608be9f7e1d54df2484e046e 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 136 1.8E-26 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XF_1893 8be2c2fb608be9f7e1d54df2484e046e 249 PIRSF PIRSF000709 1 112 8.8E-7 T 14-10-2018 XF_1893 8be2c2fb608be9f7e1d54df2484e046e 249 PIRSF PIRSF000709 172 243 0.021 T 14-10-2018 XF_1893 8be2c2fb608be9f7e1d54df2484e046e 249 Gene3D G3DSA:3.40.50.1240 2 249 1.4E-81 T 14-10-2018 IPR029033 Histidine phosphatase superfamily XF_1893 8be2c2fb608be9f7e1d54df2484e046e 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 229 43.881 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 XF_1893 8be2c2fb608be9f7e1d54df2484e046e 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 247 9.3E-126 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 XF_1893 8be2c2fb608be9f7e1d54df2484e046e 249 SMART SM00855 4 190 3.4E-23 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XF_1893 8be2c2fb608be9f7e1d54df2484e046e 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 XF_1893 8be2c2fb608be9f7e1d54df2484e046e 249 SUPERFAMILY SSF53254 1 246 4.12E-74 T 14-10-2018 IPR029033 Histidine phosphatase superfamily XF_0068 20234e590a2971edc60b1aac755eb851 333 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 111 133 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site XF_0068 20234e590a2971edc60b1aac755eb851 333 Gene3D G3DSA:1.20.120.1780 214 333 6.9E-8 T 14-10-2018 XF_0068 20234e590a2971edc60b1aac755eb851 333 Pfam PF01040 UbiA prenyltransferase family 72 314 2.5E-58 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 XF_0068 20234e590a2971edc60b1aac755eb851 333 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 49 332 28.633 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 XF_0068 20234e590a2971edc60b1aac755eb851 333 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 54 331 1.2E-115 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 XF_0068 20234e590a2971edc60b1aac755eb851 333 Gene3D G3DSA:1.10.357.140 69 213 1.0E-38 T 14-10-2018 XF_1909 063fc0674ba7e8493caf9b97cba2a78b 357 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 202 218 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 XF_1909 063fc0674ba7e8493caf9b97cba2a78b 357 Pfam PF14815 NUDIX domain 244 355 1.2E-20 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 XF_1909 063fc0674ba7e8493caf9b97cba2a78b 357 SMART SM00478 46 200 8.7E-42 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XF_1909 063fc0674ba7e8493caf9b97cba2a78b 357 Gene3D G3DSA:1.10.340.30 28 139 1.8E-79 T 14-10-2018 XF_1909 063fc0674ba7e8493caf9b97cba2a78b 357 Gene3D G3DSA:1.10.1670.10 16 220 1.8E-79 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 XF_1909 063fc0674ba7e8493caf9b97cba2a78b 357 SUPERFAMILY SSF48150 9 234 1.3E-71 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 XF_1909 063fc0674ba7e8493caf9b97cba2a78b 357 Gene3D G3DSA:3.90.79.10 242 357 2.5E-15 T 14-10-2018 XF_1909 063fc0674ba7e8493caf9b97cba2a78b 357 SUPERFAMILY SSF55811 230 356 2.03E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XF_1909 063fc0674ba7e8493caf9b97cba2a78b 357 SMART SM00525 201 221 0.0044 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 XF_1909 063fc0674ba7e8493caf9b97cba2a78b 357 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 14 288 4.5E-103 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 XF_1909 063fc0674ba7e8493caf9b97cba2a78b 357 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 42 175 2.1E-19 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XF_1147 c2357ab282ece9b61f6b4f8d4693cd4e 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 1.8E-28 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 XF_1147 c2357ab282ece9b61f6b4f8d4693cd4e 156 SUPERFAMILY SSF81573 62 121 1.31E-10 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily XF_1147 c2357ab282ece9b61f6b4f8d4693cd4e 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 2.3E-37 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 XF_1147 c2357ab282ece9b61f6b4f8d4693cd4e 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.602 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 XF_1147 c2357ab282ece9b61f6b4f8d4693cd4e 156 Gene3D G3DSA:1.20.5.620 62 122 9.0E-11 T 14-10-2018 XF_0587 c4e6bccfd446415f1fe52558daf1787c 351 SUPERFAMILY SSF56042 176 343 3.29E-55 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XF_0587 c4e6bccfd446415f1fe52558daf1787c 351 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 340 1.3E-135 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XF_0587 c4e6bccfd446415f1fe52558daf1787c 351 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 341 1.3E-35 T 14-10-2018 IPR010918 PurM-like, C-terminal domain XF_0587 c4e6bccfd446415f1fe52558daf1787c 351 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 152 4.9E-14 T 14-10-2018 IPR016188 PurM-like, N-terminal domain XF_0587 c4e6bccfd446415f1fe52558daf1787c 351 Gene3D G3DSA:3.90.650.10 176 350 9.6E-60 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XF_0587 c4e6bccfd446415f1fe52558daf1787c 351 SUPERFAMILY SSF55326 12 174 2.84E-51 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XF_0587 c4e6bccfd446415f1fe52558daf1787c 351 Gene3D G3DSA:3.30.1330.10 11 175 8.7E-68 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XF_0587 c4e6bccfd446415f1fe52558daf1787c 351 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 350 45.338 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XF_0455 f14583009b15e96fa7cd4fc85d405ea8 440 SUPERFAMILY SSF52540 14 439 2.23E-173 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0455 f14583009b15e96fa7cd4fc85d405ea8 440 SMART SM00788 14 434 1.2E-286 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XF_0455 f14583009b15e96fa7cd4fc85d405ea8 440 Gene3D G3DSA:3.40.440.10 16 259 1.0E-97 T 14-10-2018 XF_0455 f14583009b15e96fa7cd4fc85d405ea8 440 Gene3D G3DSA:3.90.170.10 277 440 2.5E-68 T 14-10-2018 XF_0455 f14583009b15e96fa7cd4fc85d405ea8 440 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 16 439 2.7E-173 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XF_0455 f14583009b15e96fa7cd4fc85d405ea8 440 Pfam PF00709 Adenylosuccinate synthetase 15 433 2.3E-175 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XF_0455 f14583009b15e96fa7cd4fc85d405ea8 440 Gene3D G3DSA:1.10.300.10 112 211 1.0E-97 T 14-10-2018 XF_0455 f14583009b15e96fa7cd4fc85d405ea8 440 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 143 154 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XF_0455 f14583009b15e96fa7cd4fc85d405ea8 440 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 440 205.332 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XF_0455 f14583009b15e96fa7cd4fc85d405ea8 440 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 21 28 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XF_2691 097040daf3895c7d6ab7751f3533d47a 293 PIRSF PIRSF000770 13 293 1.7E-33 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XF_2691 097040daf3895c7d6ab7751f3533d47a 293 SUPERFAMILY SSF88946 27 134 2.22E-38 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XF_2691 097040daf3895c7d6ab7751f3533d47a 293 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 13 293 50.919 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 XF_2691 097040daf3895c7d6ab7751f3533d47a 293 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 89 102 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XF_2691 097040daf3895c7d6ab7751f3533d47a 293 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 261 287 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XF_2691 097040daf3895c7d6ab7751f3533d47a 293 SUPERFAMILY SSF88659 219 291 7.48E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XF_2691 097040daf3895c7d6ab7751f3533d47a 293 PRINTS PR00046 Major sigma-70 factor signature 261 276 1.7E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XF_2691 097040daf3895c7d6ab7751f3533d47a 293 PRINTS PR00046 Major sigma-70 factor signature 89 102 1.7E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XF_2691 097040daf3895c7d6ab7751f3533d47a 293 PRINTS PR00046 Major sigma-70 factor signature 241 253 1.7E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XF_2691 097040daf3895c7d6ab7751f3533d47a 293 PRINTS PR00046 Major sigma-70 factor signature 276 287 1.7E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XF_2691 097040daf3895c7d6ab7751f3533d47a 293 Gene3D G3DSA:1.10.601.10 21 137 1.2E-29 T 14-10-2018 XF_2691 097040daf3895c7d6ab7751f3533d47a 293 Gene3D G3DSA:1.10.10.10 217 291 2.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_2691 097040daf3895c7d6ab7751f3533d47a 293 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 60 288 6.4E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XF_2691 097040daf3895c7d6ab7751f3533d47a 293 Pfam PF04542 Sigma-70 region 2 65 134 6.6E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XF_2691 097040daf3895c7d6ab7751f3533d47a 293 Pfam PF04545 Sigma-70, region 4 238 288 2.2E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 XF_2691 097040daf3895c7d6ab7751f3533d47a 293 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 26 291 2.0E-120 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 XF_0800 87ef987e0a0c6092b98b3ea7741d721f 278 Pfam PF08478 POTRA domain, FtsQ-type 35 103 5.6E-17 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type XF_0800 87ef987e0a0c6092b98b3ea7741d721f 278 Gene3D G3DSA:3.40.50.11690 104 231 6.1E-33 T 14-10-2018 XF_0800 87ef987e0a0c6092b98b3ea7741d721f 278 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 4 227 22.688 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 XF_0800 87ef987e0a0c6092b98b3ea7741d721f 278 Pfam PF03799 Cell division protein FtsQ 107 219 1.2E-18 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB XF_0800 87ef987e0a0c6092b98b3ea7741d721f 278 Gene3D G3DSA:3.10.20.310 33 103 5.5E-21 T 14-10-2018 XF_2306 1a466fea7b330498c0445896fc4cb9fb 334 PIRSF PIRSF001415 1 330 1.9E-150 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XF_2306 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 301 320 5.5E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XF_2306 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 153 172 5.5E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XF_2306 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 271 286 5.5E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XF_2306 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 192 211 5.5E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XF_2306 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 5.5E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XF_2306 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 246 262 5.5E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XF_2306 1a466fea7b330498c0445896fc4cb9fb 334 Gene3D G3DSA:3.20.20.70 1 331 3.2E-139 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_2306 1a466fea7b330498c0445896fc4cb9fb 334 SUPERFAMILY SSF51569 2 329 3.37E-138 T 14-10-2018 XF_2306 1a466fea7b330498c0445896fc4cb9fb 334 SMART SM01004 3 327 1.5E-231 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XF_2306 1a466fea7b330498c0445896fc4cb9fb 334 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 326 3.3E-134 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:1.10.8.60 353 439 2.0E-31 T 14-10-2018 XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:1.10.8.60 654 751 5.1E-26 T 14-10-2018 XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 SUPERFAMILY SSF81923 1 141 1.96E-54 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 732 2.8E-20 T 14-10-2018 IPR019489 Clp ATPase, C-terminal XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 SUPERFAMILY SSF52540 169 431 2.68E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 310 1.2E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:3.40.50.300 441 652 9.6E-75 T 14-10-2018 XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 SMART SM00382 207 352 8.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 SMART SM00382 488 655 8.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:3.40.50.300 157 351 2.8E-63 T 14-10-2018 XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 SMART SM01086 654 743 9.3E-29 T 14-10-2018 IPR019489 Clp ATPase, C-terminal XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 SUPERFAMILY SSF52540 438 746 6.7E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 735 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 492 510 3.2E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 3.2E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 534 552 3.2E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 596 610 3.2E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 62 1.1E-10 T 14-10-2018 IPR004176 Clp, N-terminal XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 487 648 6.3E-45 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 XF_1443 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:1.10.1780.10 1 142 2.0E-36 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XF_0954 3e100f529004bc88e8f5995900000104 154 SUPERFAMILY SSF52121 4 153 9.16E-53 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XF_0954 3e100f529004bc88e8f5995900000104 154 Gene3D G3DSA:3.40.50.960 1 154 4.0E-55 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XF_0954 3e100f529004bc88e8f5995900000104 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 27.506 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XF_0954 3e100f529004bc88e8f5995900000104 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 149 2.6E-40 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XF_0954 3e100f529004bc88e8f5995900000104 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 1.5E-49 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XF_2629 d83f873113b525682848c58f216ded07 705 Pfam PF00679 Elongation factor G C-terminus 614 700 1.8E-28 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like XF_2629 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2629 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2629 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2629 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2629 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2629 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF54211 487 613 2.38E-39 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_2629 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF54980 409 486 5.76E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like XF_2629 d83f873113b525682848c58f216ded07 705 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 704 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XF_2629 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:3.40.50.300 1 298 3.8E-114 T 14-10-2018 XF_2629 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:3.30.70.870 410 485 2.4E-34 T 14-10-2018 XF_2629 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:3.30.230.10 489 700 6.0E-83 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XF_2629 d83f873113b525682848c58f216ded07 705 SMART SM00838 614 701 7.5E-54 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like XF_2629 d83f873113b525682848c58f216ded07 705 Pfam PF03764 Elongation factor G, domain IV 484 612 4.2E-43 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 XF_2629 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF54980 617 704 2.45E-28 T 14-10-2018 IPR035647 EF-G domain III/V-like XF_2629 d83f873113b525682848c58f216ded07 705 Pfam PF03144 Elongation factor Tu domain 2 329 396 2.0E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XF_2629 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:3.30.70.240 618 688 6.0E-83 T 14-10-2018 XF_2629 d83f873113b525682848c58f216ded07 705 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 5.7E-32 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XF_2629 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF52540 6 288 3.56E-105 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2629 d83f873113b525682848c58f216ded07 705 SMART SM00889 485 612 1.1E-68 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 XF_2629 d83f873113b525682848c58f216ded07 705 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site XF_2629 d83f873113b525682848c58f216ded07 705 Pfam PF14492 Elongation Factor G, domain II 409 483 3.2E-35 T 14-10-2018 XF_2629 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF50447 255 407 7.73E-35 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XF_2629 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:2.40.30.10 299 405 1.3E-44 T 14-10-2018 XF_2629 d83f873113b525682848c58f216ded07 705 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 7.5E-65 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2629 d83f873113b525682848c58f216ded07 705 Hamap MF_00054_B Elongation factor G [fusA]. 6 705 109.297 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XF_0210 f244e9791bf9cee3ccce54c45f6dca2e 487 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 23 480 1.1E-163 T 14-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_0210 f244e9791bf9cee3ccce54c45f6dca2e 487 SUPERFAMILY SSF56322 12 480 2.22E-154 T 14-10-2018 IPR005801 ADC synthase GO:0009058 XF_0210 f244e9791bf9cee3ccce54c45f6dca2e 487 Pfam PF04715 Anthranilate synthase component I, N terminal region 23 166 1.1E-26 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_0210 f244e9791bf9cee3ccce54c45f6dca2e 487 Gene3D G3DSA:3.60.120.10 1 486 3.1E-173 T 14-10-2018 IPR005801 ADC synthase GO:0009058 XF_0210 f244e9791bf9cee3ccce54c45f6dca2e 487 Pfam PF00425 chorismate binding enzyme 219 472 5.8E-96 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal XF_0210 f244e9791bf9cee3ccce54c45f6dca2e 487 PRINTS PR00095 Anthranilate synthase component I signature 334 347 2.7E-21 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_0210 f244e9791bf9cee3ccce54c45f6dca2e 487 PRINTS PR00095 Anthranilate synthase component I signature 320 333 2.7E-21 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_0210 f244e9791bf9cee3ccce54c45f6dca2e 487 PRINTS PR00095 Anthranilate synthase component I signature 429 443 2.7E-21 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_0210 f244e9791bf9cee3ccce54c45f6dca2e 487 PRINTS PR00095 Anthranilate synthase component I signature 414 428 2.7E-21 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_1229 7637ee69fe6203723e1ece29e0fee838 833 SMART SM00847 385 481 4.4E-11 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 XF_1229 7637ee69fe6203723e1ece29e0fee838 833 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 6 830 0.0 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 XF_1229 7637ee69fe6203723e1ece29e0fee838 833 Pfam PF08482 ATP-dependent helicase C-terminal 682 819 4.2E-50 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal XF_1229 7637ee69fe6203723e1ece29e0fee838 833 SMART SM00487 4 190 4.4E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_1229 7637ee69fe6203723e1ece29e0fee838 833 Pfam PF04408 Helicase associated domain (HA2) 386 450 9.7E-16 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 XF_1229 7637ee69fe6203723e1ece29e0fee838 833 PIRSF PIRSF005496 1 833 0.0 T 14-10-2018 XF_1229 7637ee69fe6203723e1ece29e0fee838 833 SMART SM00490 232 330 5.3E-16 T 14-10-2018 IPR001650 Helicase, C-terminal XF_1229 7637ee69fe6203723e1ece29e0fee838 833 Gene3D G3DSA:1.20.120.1080 369 457 1.8E-9 T 14-10-2018 XF_1229 7637ee69fe6203723e1ece29e0fee838 833 Gene3D G3DSA:3.40.50.300 1 181 5.8E-52 T 14-10-2018 XF_1229 7637ee69fe6203723e1ece29e0fee838 833 SUPERFAMILY SSF52540 18 341 2.79E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1229 7637ee69fe6203723e1ece29e0fee838 833 Pfam PF00271 Helicase conserved C-terminal domain 210 329 2.8E-16 T 14-10-2018 IPR001650 Helicase, C-terminal XF_1229 7637ee69fe6203723e1ece29e0fee838 833 Gene3D G3DSA:3.40.50.300 182 347 1.9E-51 T 14-10-2018 XF_0358 6020316c1a2375f2eea837b611146d4a 385 Gene3D G3DSA:3.40.50.1820 302 385 1.1E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0358 6020316c1a2375f2eea837b611146d4a 385 Gene3D G3DSA:3.40.50.1820 1 217 1.4E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0358 6020316c1a2375f2eea837b611146d4a 385 PIRSF PIRSF029171 2 385 6.8E-74 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XF_0358 6020316c1a2375f2eea837b611146d4a 385 SUPERFAMILY SSF53474 43 352 5.31E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0358 6020316c1a2375f2eea837b611146d4a 385 Pfam PF03583 Secretory lipase 93 175 4.6E-8 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XF_0358 6020316c1a2375f2eea837b611146d4a 385 Gene3D G3DSA:1.10.260.160 218 301 4.1E-5 T 14-10-2018 XF_1470 cf663ff8ccfa4ff5a7b8ff8634460cd1 376 Gene3D G3DSA:3.40.50.2000 1 161 1.9E-11 T 14-10-2018 XF_1470 cf663ff8ccfa4ff5a7b8ff8634460cd1 376 Pfam PF13439 Glycosyltransferase Family 4 13 156 6.3E-11 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XF_1470 cf663ff8ccfa4ff5a7b8ff8634460cd1 376 SUPERFAMILY SSF53756 2 370 1.13E-63 T 14-10-2018 XF_1470 cf663ff8ccfa4ff5a7b8ff8634460cd1 376 Gene3D G3DSA:3.40.50.2000 169 348 2.3E-42 T 14-10-2018 XF_1470 cf663ff8ccfa4ff5a7b8ff8634460cd1 376 Pfam PF00534 Glycosyl transferases group 1 183 344 9.1E-31 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 XF_2014 be78a9a9b121e5a61195cf023f09df20 147 SUPERFAMILY SSF88697 1 146 7.79E-54 T 14-10-2018 IPR015947 PUA-like superfamily XF_2014 be78a9a9b121e5a61195cf023f09df20 147 Pfam PF01878 EVE domain 1 145 2.0E-49 T 14-10-2018 IPR002740 EVE domain XF_2014 be78a9a9b121e5a61195cf023f09df20 147 Gene3D G3DSA:3.10.590.10 1 147 5.6E-58 T 14-10-2018 XF_0156 9fbca8908e1af78a82632d5c5f955717 271 SMART SM00645 37 267 0.0013 T 14-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 XF_0156 9fbca8908e1af78a82632d5c5f955717 271 Pfam PF00112 Papain family cysteine protease 48 254 1.5E-13 T 14-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 XF_0156 9fbca8908e1af78a82632d5c5f955717 271 Gene3D G3DSA:3.90.70.10 4 271 7.2E-129 T 14-10-2018 XF_0156 9fbca8908e1af78a82632d5c5f955717 271 SUPERFAMILY SSF54001 30 256 1.97E-38 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XF_0017 487a14351a98d1ad04497c7540d6a3c4 319 PIRSF PIRSF000166 5 313 3.0E-119 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XF_0017 487a14351a98d1ad04497c7540d6a3c4 319 Pfam PF01218 Coproporphyrinogen III oxidase 20 312 1.2E-125 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XF_0017 487a14351a98d1ad04497c7540d6a3c4 319 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 178 202 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XF_0017 487a14351a98d1ad04497c7540d6a3c4 319 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 15 288 58.192 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XF_0017 487a14351a98d1ad04497c7540d6a3c4 319 PRINTS PR00073 Coprogen oxidase signature 60 81 1.9E-81 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XF_0017 487a14351a98d1ad04497c7540d6a3c4 319 PRINTS PR00073 Coprogen oxidase signature 43 59 1.9E-81 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XF_0017 487a14351a98d1ad04497c7540d6a3c4 319 PRINTS PR00073 Coprogen oxidase signature 273 299 1.9E-81 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XF_0017 487a14351a98d1ad04497c7540d6a3c4 319 PRINTS PR00073 Coprogen oxidase signature 137 159 1.9E-81 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XF_0017 487a14351a98d1ad04497c7540d6a3c4 319 PRINTS PR00073 Coprogen oxidase signature 102 126 1.9E-81 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XF_0017 487a14351a98d1ad04497c7540d6a3c4 319 PRINTS PR00073 Coprogen oxidase signature 174 203 1.9E-81 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XF_0017 487a14351a98d1ad04497c7540d6a3c4 319 PRINTS PR00073 Coprogen oxidase signature 245 272 1.9E-81 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XF_0017 487a14351a98d1ad04497c7540d6a3c4 319 SUPERFAMILY SSF102886 19 311 1.83E-127 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XF_0017 487a14351a98d1ad04497c7540d6a3c4 319 Gene3D G3DSA:3.40.1500.10 8 312 2.8E-126 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XF_1776 147e03370ba2780d46127020653c1fa6 619 SMART SM00437 220 504 6.6E-66 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 XF_1776 147e03370ba2780d46127020653c1fa6 619 Pfam PF01751 Toprim domain 33 77 4.8E-7 T 14-10-2018 IPR006171 TOPRIM domain XF_1776 147e03370ba2780d46127020653c1fa6 619 SUPERFAMILY SSF56712 32 549 6.41E-151 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XF_1776 147e03370ba2780d46127020653c1fa6 619 SMART SM00436 71 166 5.5E-33 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 XF_1776 147e03370ba2780d46127020653c1fa6 619 Gene3D G3DSA:3.40.50.140 7 98 1.2E-16 T 14-10-2018 XF_1776 147e03370ba2780d46127020653c1fa6 619 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 566 600 6.8E-10 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 XF_1776 147e03370ba2780d46127020653c1fa6 619 Gene3D G3DSA:2.70.20.10 160 434 2.2E-147 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XF_1776 147e03370ba2780d46127020653c1fa6 619 Gene3D G3DSA:1.10.460.10 105 548 2.2E-147 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XF_1776 147e03370ba2780d46127020653c1fa6 619 Gene3D G3DSA:1.10.290.10 229 358 2.2E-147 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XF_1776 147e03370ba2780d46127020653c1fa6 619 Pfam PF01131 DNA topoisomerase 101 535 4.3E-110 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_1776 147e03370ba2780d46127020653c1fa6 619 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 257 272 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 XF_1776 147e03370ba2780d46127020653c1fa6 619 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 45 58 3.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_1776 147e03370ba2780d46127020653c1fa6 619 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 263 272 3.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_1776 147e03370ba2780d46127020653c1fa6 619 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 344 360 3.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_1776 147e03370ba2780d46127020653c1fa6 619 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 467 481 3.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_1776 147e03370ba2780d46127020653c1fa6 619 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 136 154 3.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_1776 147e03370ba2780d46127020653c1fa6 619 SUPERFAMILY SSF57783 565 599 9.69E-10 T 14-10-2018 XF_1776 147e03370ba2780d46127020653c1fa6 619 TIGRFAM TIGR01056 topB: DNA topoisomerase III 34 596 2.0E-179 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 XF_0170 fe300dc09c0c12b34ed8fbb76d58f93f 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 4.7E-23 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 XF_0170 fe300dc09c0c12b34ed8fbb76d58f93f 271 SMART SM01232 131 223 2.6E-43 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 XF_0170 fe300dc09c0c12b34ed8fbb76d58f93f 271 Gene3D G3DSA:3.20.190.10 2 130 4.2E-36 T 14-10-2018 IPR035937 MutM-like, N-terminal XF_0170 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF57716 219 270 4.56E-15 T 14-10-2018 XF_0170 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF81624 2 136 6.67E-38 T 14-10-2018 IPR035937 MutM-like, N-terminal XF_0170 fe300dc09c0c12b34ed8fbb76d58f93f 271 Gene3D G3DSA:1.10.8.50 141 270 6.2E-43 T 14-10-2018 XF_0170 fe300dc09c0c12b34ed8fbb76d58f93f 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 XF_0170 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF46946 132 223 1.31E-28 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 XF_0170 fe300dc09c0c12b34ed8fbb76d58f93f 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 1.2E-87 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 XF_0170 fe300dc09c0c12b34ed8fbb76d58f93f 271 SMART SM00898 2 117 5.1E-49 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 XF_0170 fe300dc09c0c12b34ed8fbb76d58f93f 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 41.633 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 XF_0170 fe300dc09c0c12b34ed8fbb76d58f93f 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 7.9E-31 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 XF_0071 fe300dc09c0c12b34ed8fbb76d58f93f 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 4.7E-23 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 XF_0071 fe300dc09c0c12b34ed8fbb76d58f93f 271 SMART SM01232 131 223 2.6E-43 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 XF_0071 fe300dc09c0c12b34ed8fbb76d58f93f 271 Gene3D G3DSA:3.20.190.10 2 130 4.2E-36 T 14-10-2018 IPR035937 MutM-like, N-terminal XF_0071 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF57716 219 270 4.56E-15 T 14-10-2018 XF_0071 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF81624 2 136 6.67E-38 T 14-10-2018 IPR035937 MutM-like, N-terminal XF_0071 fe300dc09c0c12b34ed8fbb76d58f93f 271 Gene3D G3DSA:1.10.8.50 141 270 6.2E-43 T 14-10-2018 XF_0071 fe300dc09c0c12b34ed8fbb76d58f93f 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 XF_0071 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF46946 132 223 1.31E-28 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 XF_0071 fe300dc09c0c12b34ed8fbb76d58f93f 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 1.2E-87 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 XF_0071 fe300dc09c0c12b34ed8fbb76d58f93f 271 SMART SM00898 2 117 5.1E-49 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 XF_0071 fe300dc09c0c12b34ed8fbb76d58f93f 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 41.633 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 XF_0071 fe300dc09c0c12b34ed8fbb76d58f93f 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 7.9E-31 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 XF_0356 47e54a1c98a3dc1ab9d4119c8979efb6 400 Gene3D G3DSA:1.10.630.10 1 400 2.3E-113 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 XF_0356 47e54a1c98a3dc1ab9d4119c8979efb6 400 SUPERFAMILY SSF48264 9 396 9.82E-89 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 XF_0356 47e54a1c98a3dc1ab9d4119c8979efb6 400 Pfam PF00067 Cytochrome P450 79 368 6.0E-32 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 XF_0356 47e54a1c98a3dc1ab9d4119c8979efb6 400 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 341 350 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 XF_0356 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 339 348 6.6E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_0356 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 348 359 6.6E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_0356 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 318 333 6.6E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_0356 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 131 147 6.6E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_0356 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 192 214 6.6E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_0356 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 273 284 6.6E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_0356 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 85 96 6.6E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_0356 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 290 317 6.6E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_1902 6af40a1c7b12344185a87ce581f1ebda 343 SUPERFAMILY SSF46785 257 328 1.97E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_1902 6af40a1c7b12344185a87ce581f1ebda 343 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 1.9E-32 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 XF_1902 6af40a1c7b12344185a87ce581f1ebda 343 Gene3D G3DSA:1.10.10.10 257 335 3.4E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1902 6af40a1c7b12344185a87ce581f1ebda 343 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 343 174.085 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 XF_1902 6af40a1c7b12344185a87ce581f1ebda 343 Gene3D G3DSA:1.10.8.60 182 255 1.4E-30 T 14-10-2018 XF_1902 6af40a1c7b12344185a87ce581f1ebda 343 SMART SM00382 51 182 2.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1902 6af40a1c7b12344185a87ce581f1ebda 343 Gene3D G3DSA:3.40.50.300 18 181 1.6E-37 T 14-10-2018 XF_1902 6af40a1c7b12344185a87ce581f1ebda 343 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 235 5.7E-117 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 XF_1902 6af40a1c7b12344185a87ce581f1ebda 343 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 250 333 3.0E-42 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 XF_1902 6af40a1c7b12344185a87ce581f1ebda 343 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 23 326 2.1E-144 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 XF_1902 6af40a1c7b12344185a87ce581f1ebda 343 SUPERFAMILY SSF52540 20 252 1.41E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1073 5549c01716cd5c47242ab8d57970371e 261 Pfam PF13534 4Fe-4S dicluster domain 171 244 6.7E-10 T 14-10-2018 XF_1073 5549c01716cd5c47242ab8d57970371e 261 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 XF_1073 5549c01716cd5c47242ab8d57970371e 261 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 253 5.5E-84 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1073 5549c01716cd5c47242ab8d57970371e 261 SUPERFAMILY SSF46548 131 258 5.06E-40 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XF_1073 5549c01716cd5c47242ab8d57970371e 261 SUPERFAMILY SSF54292 28 129 3.19E-30 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 XF_1073 5549c01716cd5c47242ab8d57970371e 261 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 134 6.7E-34 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1073 5549c01716cd5c47242ab8d57970371e 261 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XF_1073 5549c01716cd5c47242ab8d57970371e 261 Gene3D G3DSA:1.10.1060.10 130 261 5.9E-59 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XF_1073 5549c01716cd5c47242ab8d57970371e 261 Gene3D G3DSA:3.10.20.30 19 129 1.0E-44 T 14-10-2018 IPR012675 Beta-grasp domain superfamily XF_0286 610a569f6c3d272a4687c10fcf4bf421 298 Gene3D G3DSA:3.40.50.720 1 285 1.7E-74 T 14-10-2018 XF_0286 610a569f6c3d272a4687c10fcf4bf421 298 Pfam PF08338 Domain of unknown function (DUF1731) 249 294 1.5E-14 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 XF_0286 610a569f6c3d272a4687c10fcf4bf421 298 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 4 291 6.5E-98 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 XF_0286 610a569f6c3d272a4687c10fcf4bf421 298 SUPERFAMILY SSF51735 1 292 1.93E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0286 610a569f6c3d272a4687c10fcf4bf421 298 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 221 1.9E-17 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 XF_1917 8922732cd523daa930869e7c6266795a 172 Pfam PF00583 Acetyltransferase (GNAT) family 29 144 3.3E-7 T 14-10-2018 IPR000182 GNAT domain XF_1917 8922732cd523daa930869e7c6266795a 172 SUPERFAMILY SSF55729 44 147 1.14E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase XF_1917 8922732cd523daa930869e7c6266795a 172 Gene3D G3DSA:3.40.630.30 7 161 6.7E-7 T 14-10-2018 XF_0711 5986c445100160d11cc1bfe57ce7b569 580 Pfam PF05876 Phage terminase large subunit (GpA) 2 526 2.1E-158 T 14-10-2018 IPR008866 Bacteriophage lambda, GpA XF_0711 5986c445100160d11cc1bfe57ce7b569 580 Gene3D G3DSA:3.40.50.300 3 167 1.4E-7 T 14-10-2018 XF_2500 5986c445100160d11cc1bfe57ce7b569 580 Pfam PF05876 Phage terminase large subunit (GpA) 2 526 2.1E-158 T 14-10-2018 IPR008866 Bacteriophage lambda, GpA XF_2500 5986c445100160d11cc1bfe57ce7b569 580 Gene3D G3DSA:3.40.50.300 3 167 1.4E-7 T 14-10-2018 XF_2696 1604069cd0b7b515c7e74c5f60b3cc4e 544 SMART SM00487 29 236 3.2E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_2696 1604069cd0b7b515c7e74c5f60b3cc4e 544 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 165 173 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XF_2696 1604069cd0b7b515c7e74c5f60b3cc4e 544 Gene3D G3DSA:3.40.50.300 2 223 1.0E-74 T 14-10-2018 XF_2696 1604069cd0b7b515c7e74c5f60b3cc4e 544 Pfam PF12300 ATP-dependent RNA helicase RhlB 378 517 1.2E-6 T 14-10-2018 IPR022077 ATP-dependent RNA helicase RhlB GO:0016817 XF_2696 1604069cd0b7b515c7e74c5f60b3cc4e 544 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 9 391 49.9 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 XF_2696 1604069cd0b7b515c7e74c5f60b3cc4e 544 Pfam PF00270 DEAD/DEAH box helicase 34 207 1.1E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XF_2696 1604069cd0b7b515c7e74c5f60b3cc4e 544 Gene3D G3DSA:3.40.50.300 227 390 1.8E-43 T 14-10-2018 XF_2696 1604069cd0b7b515c7e74c5f60b3cc4e 544 SUPERFAMILY SSF52540 85 364 1.29E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2696 1604069cd0b7b515c7e74c5f60b3cc4e 544 Pfam PF00271 Helicase conserved C-terminal domain 245 353 4.3E-27 T 14-10-2018 IPR001650 Helicase, C-terminal XF_2696 1604069cd0b7b515c7e74c5f60b3cc4e 544 SMART SM00490 272 353 4.0E-30 T 14-10-2018 IPR001650 Helicase, C-terminal XF_1402 46e32e2413200448148142205e05a83f 590 PIRSF PIRSF000732 15 590 7.7E-196 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 XF_1402 46e32e2413200448148142205e05a83f 590 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 463 481 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 XF_1402 46e32e2413200448148142205e05a83f 590 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 20 578 2.5E-140 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 XF_1402 46e32e2413200448148142205e05a83f 590 SUPERFAMILY SSF47831 43 157 2.88E-25 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 XF_1402 46e32e2413200448148142205e05a83f 590 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 267 556 6.3E-96 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 XF_1402 46e32e2413200448148142205e05a83f 590 Gene3D G3DSA:3.50.30.10 22 248 1.4E-54 T 14-10-2018 XF_1402 46e32e2413200448148142205e05a83f 590 Pfam PF00391 PEP-utilising enzyme, mobile domain 168 240 3.7E-15 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 XF_1402 46e32e2413200448148142205e05a83f 590 Gene3D G3DSA:3.20.20.60 249 588 2.7E-108 T 14-10-2018 XF_1402 46e32e2413200448148142205e05a83f 590 Gene3D G3DSA:1.10.274.10 39 162 1.4E-54 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 XF_1402 46e32e2413200448148142205e05a83f 590 SUPERFAMILY SSF52009 129 248 7.98E-25 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 XF_1402 46e32e2413200448148142205e05a83f 590 Pfam PF05524 PEP-utilising enzyme, N-terminal 21 142 5.4E-21 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 XF_1402 46e32e2413200448148142205e05a83f 590 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 516 528 3.0E-26 T 14-10-2018 XF_1402 46e32e2413200448148142205e05a83f 590 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 463 478 3.0E-26 T 14-10-2018 XF_1402 46e32e2413200448148142205e05a83f 590 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 480 495 3.0E-26 T 14-10-2018 XF_1402 46e32e2413200448148142205e05a83f 590 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 308 327 3.0E-26 T 14-10-2018 XF_1402 46e32e2413200448148142205e05a83f 590 SUPERFAMILY SSF51621 264 563 2.88E-92 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XF_2397 0dffd000dafc4aa177a84d00d6ef4718 720 ProSitePatterns PS00211 ABC transporters family signature. 617 631 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_2397 0dffd000dafc4aa177a84d00d6ef4718 720 Gene3D G3DSA:1.20.1560.10 152 465 2.3E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XF_2397 0dffd000dafc4aa177a84d00d6ef4718 720 Gene3D G3DSA:3.90.70.10 21 148 1.6E-23 T 14-10-2018 XF_2397 0dffd000dafc4aa177a84d00d6ef4718 720 SMART SM00382 505 691 1.3E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_2397 0dffd000dafc4aa177a84d00d6ef4718 720 Gene3D G3DSA:3.40.50.300 474 718 1.4E-91 T 14-10-2018 XF_2397 0dffd000dafc4aa177a84d00d6ef4718 720 Pfam PF03412 Peptidase C39 family 18 140 4.8E-12 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 XF_2397 0dffd000dafc4aa177a84d00d6ef4718 720 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 24 717 0.0 T 14-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 XF_2397 0dffd000dafc4aa177a84d00d6ef4718 720 Pfam PF00664 ABC transporter transmembrane region 168 434 5.2E-52 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XF_2397 0dffd000dafc4aa177a84d00d6ef4718 720 SUPERFAMILY SSF52540 469 716 1.54E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2397 0dffd000dafc4aa177a84d00d6ef4718 720 SUPERFAMILY SSF90123 153 460 4.97E-66 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XF_2397 0dffd000dafc4aa177a84d00d6ef4718 720 Pfam PF00005 ABC transporter 497 645 3.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_2141 a6ee0b6579ae5152c2b5e44000b03fbd 364 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 53 361 1.3E-122 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 XF_2141 a6ee0b6579ae5152c2b5e44000b03fbd 364 Gene3D G3DSA:3.40.190.10 127 303 3.8E-125 T 14-10-2018 XF_2141 a6ee0b6579ae5152c2b5e44000b03fbd 364 PIRSF PIRSF002756 4 362 9.2E-106 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 XF_2141 a6ee0b6579ae5152c2b5e44000b03fbd 364 Gene3D G3DSA:3.40.190.10 54 350 3.8E-125 T 14-10-2018 XF_2141 a6ee0b6579ae5152c2b5e44000b03fbd 364 SUPERFAMILY SSF53850 53 360 1.51E-96 T 14-10-2018 XF_2141 a6ee0b6579ae5152c2b5e44000b03fbd 364 Pfam PF12849 PBP superfamily domain 45 332 6.4E-59 T 14-10-2018 IPR024370 PBP domain XF_0238 d9ef1d97d6eed058874d4ac93d0be155 86 Gene3D G3DSA:1.10.287.10 2 86 2.3E-33 T 14-10-2018 XF_0238 d9ef1d97d6eed058874d4ac93d0be155 86 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 86 21.234 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0238 d9ef1d97d6eed058874d4ac93d0be155 86 ProSitePatterns PS00362 Ribosomal protein S15 signature. 36 66 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_0238 d9ef1d97d6eed058874d4ac93d0be155 86 SMART SM01387 5 85 5.1E-47 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_0238 d9ef1d97d6eed058874d4ac93d0be155 86 Pfam PF00312 Ribosomal protein S15 6 85 6.2E-36 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_0238 d9ef1d97d6eed058874d4ac93d0be155 86 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 3 86 1.8E-36 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0238 d9ef1d97d6eed058874d4ac93d0be155 86 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 8 85 1.0E-38 T 14-10-2018 XF_0238 d9ef1d97d6eed058874d4ac93d0be155 86 SUPERFAMILY SSF47060 4 86 1.18E-33 T 14-10-2018 IPR009068 S15/NS1, RNA-binding XF_2579 1a2e4f70424b8a6a29f6b7065f144813 299 Pfam PF00889 Elongation factor TS 77 279 2.4E-64 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 XF_2579 1a2e4f70424b8a6a29f6b7065f144813 299 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 8 296 2.6E-98 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XF_2579 1a2e4f70424b8a6a29f6b7065f144813 299 Gene3D G3DSA:3.30.479.20 63 154 3.6E-25 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XF_2579 1a2e4f70424b8a6a29f6b7065f144813 299 SUPERFAMILY SSF54713 62 151 2.4E-20 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XF_2579 1a2e4f70424b8a6a29f6b7065f144813 299 Hamap MF_00050 Elongation factor Ts [tsf]. 1 296 70.304 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XF_2579 1a2e4f70424b8a6a29f6b7065f144813 299 SUPERFAMILY SSF46934 8 62 4.62E-19 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 XF_2579 1a2e4f70424b8a6a29f6b7065f144813 299 ProSitePatterns PS01127 Elongation factor Ts signature 2. 81 91 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XF_2579 1a2e4f70424b8a6a29f6b7065f144813 299 Gene3D G3DSA:1.10.286.20 196 244 4.3E-39 T 14-10-2018 XF_2579 1a2e4f70424b8a6a29f6b7065f144813 299 SUPERFAMILY SSF54713 156 296 6.28E-46 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XF_2579 1a2e4f70424b8a6a29f6b7065f144813 299 Gene3D G3DSA:1.10.8.10 8 62 1.7E-26 T 14-10-2018 XF_2579 1a2e4f70424b8a6a29f6b7065f144813 299 ProSitePatterns PS01126 Elongation factor Ts signature 1. 18 33 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XF_2579 1a2e4f70424b8a6a29f6b7065f144813 299 Gene3D G3DSA:3.30.479.20 160 278 4.3E-39 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XF_0202 7926d81f75fe5f4fe416a82be23d7fb0 150 PIRSF PIRSF004638 1 150 1.9E-41 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 XF_0202 7926d81f75fe5f4fe416a82be23d7fb0 150 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 150 1.0E-39 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 11 468 5.9E-205 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 Pfam PF00072 Response regulator receiver domain 11 118 1.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 453 473 5.3E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 453 5.3E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 SMART SM00448 9 124 7.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 SMART SM00382 167 310 1.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 Pfam PF02954 Bacterial regulatory protein, Fis family 434 467 1.8E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 Gene3D G3DSA:3.40.50.2300 6 132 4.4E-32 T 14-10-2018 XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 SUPERFAMILY SSF52172 8 191 6.97E-38 T 14-10-2018 IPR011006 CheY-like superfamily XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 Pfam PF00158 Sigma-54 interaction domain 147 313 4.1E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 Gene3D G3DSA:3.40.50.300 140 317 1.2E-62 T 14-10-2018 XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 Gene3D G3DSA:1.10.8.60 318 391 1.7E-21 T 14-10-2018 XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 SUPERFAMILY SSF52540 147 391 2.88E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 SUPERFAMILY SSF46689 402 467 7.17E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XF_1848 cd3696e20bcd8d6b82233e42e2c0dacc 475 Gene3D G3DSA:1.10.10.60 392 470 9.5E-16 T 14-10-2018 XF_1846 ba91f29fe5b968098844021ccb9714ef 56 SUPERFAMILY SSF56712 6 49 6.41E-10 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XF_1846 ba91f29fe5b968098844021ccb9714ef 56 Gene3D G3DSA:1.10.460.10 19 55 9.9E-9 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XF_1846 ba91f29fe5b968098844021ccb9714ef 56 Pfam PF01131 DNA topoisomerase 15 47 2.4E-7 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_0413 14c748ced2201f40185e200b0fdec180 456 Gene3D G3DSA:1.20.120.20 44 201 2.3E-6 T 14-10-2018 XF_0413 14c748ced2201f40185e200b0fdec180 456 SUPERFAMILY SSF58113 36 186 1.83E-5 T 14-10-2018 XF_0413 14c748ced2201f40185e200b0fdec180 456 Pfam PF02646 RmuC family 144 434 1.2E-74 T 14-10-2018 IPR003798 DNA recombination RmuC XF_0977 3ab438bdeb17e026f39e5e30426fa174 764 Gene3D G3DSA:3.40.50.10380 1 161 1.3E-66 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 XF_0977 3ab438bdeb17e026f39e5e30426fa174 764 SUPERFAMILY SSF53223 12 162 2.73E-51 T 14-10-2018 XF_0977 3ab438bdeb17e026f39e5e30426fa174 764 Gene3D G3DSA:3.40.50.720 162 444 7.0E-79 T 14-10-2018 XF_0977 3ab438bdeb17e026f39e5e30426fa174 764 Gene3D G3DSA:3.40.50.10750 571 724 4.5E-84 T 14-10-2018 XF_0977 3ab438bdeb17e026f39e5e30426fa174 764 SMART SM01274 19 152 2.4E-77 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 XF_0977 3ab438bdeb17e026f39e5e30426fa174 764 SUPERFAMILY SSF53659 428 751 9.46E-83 T 14-10-2018 XF_0977 3ab438bdeb17e026f39e5e30426fa174 764 Pfam PF00390 Malic enzyme, N-terminal domain 20 152 1.9E-27 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 XF_0977 3ab438bdeb17e026f39e5e30426fa174 764 SMART SM00919 164 399 1.8E-126 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 XF_0977 3ab438bdeb17e026f39e5e30426fa174 764 Pfam PF01515 Phosphate acetyl/butaryl transferase 428 748 1.2E-86 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 XF_0977 3ab438bdeb17e026f39e5e30426fa174 764 PIRSF PIRSF036684 1 756 0.0 T 14-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 XF_0977 3ab438bdeb17e026f39e5e30426fa174 764 SUPERFAMILY SSF51735 164 451 6.81E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0977 3ab438bdeb17e026f39e5e30426fa174 764 Gene3D G3DSA:3.40.50.10950 445 748 4.5E-84 T 14-10-2018 XF_0977 3ab438bdeb17e026f39e5e30426fa174 764 Pfam PF03949 Malic enzyme, NAD binding domain 166 359 2.9E-19 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 XF_1755 37a56c27583451bd409d42fc42367b0c 209 Pfam PF08808 RES domain 28 179 1.3E-20 T 14-10-2018 IPR014914 RES domain XF_1755 37a56c27583451bd409d42fc42367b0c 209 SMART SM00953 27 174 1.3E-13 T 14-10-2018 IPR014914 RES domain XF_2140 3992e134b0f520e96a31221728698f00 572 Pfam PF00999 Sodium/hydrogen exchanger family 12 395 6.2E-83 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 XF_2140 3992e134b0f520e96a31221728698f00 572 SUPERFAMILY SSF51735 426 557 4.04E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2140 3992e134b0f520e96a31221728698f00 572 Gene3D G3DSA:1.20.1530.20 5 409 3.7E-80 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily XF_2140 3992e134b0f520e96a31221728698f00 572 Gene3D G3DSA:3.40.50.720 425 568 5.0E-30 T 14-10-2018 XF_2140 3992e134b0f520e96a31221728698f00 572 Pfam PF02254 TrkA-N domain 429 542 6.4E-22 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 XF_2649 eaceb479df3fe3cb0aea807d416615ee 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XF_2649 eaceb479df3fe3cb0aea807d416615ee 361 Gene3D G3DSA:3.30.70.1660 112 343 2.5E-94 T 14-10-2018 XF_2649 eaceb479df3fe3cb0aea807d416615ee 361 Gene3D G3DSA:3.30.160.20 210 297 2.5E-94 T 14-10-2018 XF_2649 eaceb479df3fe3cb0aea807d416615ee 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 4.7E-155 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 XF_2649 eaceb479df3fe3cb0aea807d416615ee 361 Pfam PF00472 RF-1 domain 213 321 1.3E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XF_2649 eaceb479df3fe3cb0aea807d416615ee 361 SMART SM00937 63 178 1.7E-63 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 XF_2649 eaceb479df3fe3cb0aea807d416615ee 361 Pfam PF03462 PCRF domain 13 203 3.1E-70 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 XF_2649 eaceb479df3fe3cb0aea807d416615ee 361 SUPERFAMILY SSF75620 12 354 3.14E-129 T 14-10-2018 XF_2649 eaceb479df3fe3cb0aea807d416615ee 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 358 39.818 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 703 743 6.4E-8 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 361 399 8.5E-5 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 188 224 1.7E-4 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 532 570 4.1E-5 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 111 135 6.7E-8 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 484 509 2.0E-4 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 140 165 8.4E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 412 437 1.9E-4 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 582 608 3.4E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 238 264 9.0E-6 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Gene3D G3DSA:3.30.1300.30 896 1004 6.5E-16 T 14-10-2018 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Gene3D G3DSA:1.20.5.170 706 793 1.3E-15 T 14-10-2018 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Gene3D G3DSA:2.150.10.10 579 705 6.7E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1516 92dfc75fb320c2a59970041508076ac4 1004 SUPERFAMILY SSF54523 882 1004 4.39E-12 T 14-10-2018 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Gene3D G3DSA:2.150.10.10 50 218 1.0E-23 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Gene3D G3DSA:2.150.10.10 393 564 2.5E-28 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Gene3D G3DSA:2.150.10.10 219 392 2.0E-28 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1516 92dfc75fb320c2a59970041508076ac4 1004 SUPERFAMILY SSF101967 408 554 5.49E-25 T 14-10-2018 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 SUPERFAMILY SSF101967 233 383 2.09E-25 T 14-10-2018 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 SUPERFAMILY SSF101967 576 728 4.05E-27 T 14-10-2018 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 SUPERFAMILY SSF101967 109 210 1.44E-20 T 14-10-2018 XF_1516 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF03895 YadA-like membrane anchor domain 952 1004 1.0E-9 T 14-10-2018 IPR005594 YadA-like, C-terminal XF_2571 99f76eb8886644da07b1c6a03437c8d0 359 Pfam PF01180 Dihydroorotate dehydrogenase 53 344 1.9E-89 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 XF_2571 99f76eb8886644da07b1c6a03437c8d0 359 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 87 106 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 XF_2571 99f76eb8886644da07b1c6a03437c8d0 359 SUPERFAMILY SSF51395 9 346 3.05E-101 T 14-10-2018 XF_2571 99f76eb8886644da07b1c6a03437c8d0 359 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 10 348 1.1E-124 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 XF_2571 99f76eb8886644da07b1c6a03437c8d0 359 Gene3D G3DSA:3.20.20.70 9 344 7.3E-128 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_2571 99f76eb8886644da07b1c6a03437c8d0 359 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 9 344 48.715 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 XF_2624 9dff8cc284ddde098e80db965be55204 690 Gene3D G3DSA:3.30.70.270 259 431 1.4E-25 T 14-10-2018 XF_2624 9dff8cc284ddde098e80db965be55204 690 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 426 1.2E-13 T 14-10-2018 IPR000160 GGDEF domain XF_2624 9dff8cc284ddde098e80db965be55204 690 SUPERFAMILY SSF55073 275 433 6.12E-19 T 14-10-2018 IPR029787 Nucleotide cyclase XF_2624 9dff8cc284ddde098e80db965be55204 690 SMART SM00052 443 690 1.3E-27 T 14-10-2018 IPR001633 EAL domain XF_2624 9dff8cc284ddde098e80db965be55204 690 SUPERFAMILY SSF141868 449 680 1.7E-46 T 14-10-2018 IPR035919 EAL domain superfamily XF_2624 9dff8cc284ddde098e80db965be55204 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 250 1.2E-8 T 14-10-2018 IPR000014 PAS domain XF_2624 9dff8cc284ddde098e80db965be55204 690 SUPERFAMILY SSF52172 8 164 2.69E-7 T 14-10-2018 IPR011006 CheY-like superfamily XF_2624 9dff8cc284ddde098e80db965be55204 690 Pfam PF00989 PAS fold 147 251 9.3E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 XF_2624 9dff8cc284ddde098e80db965be55204 690 SMART SM00267 258 431 2.0E-7 T 14-10-2018 IPR000160 GGDEF domain XF_2624 9dff8cc284ddde098e80db965be55204 690 Pfam PF00563 EAL domain 449 681 2.4E-51 T 14-10-2018 IPR001633 EAL domain XF_2624 9dff8cc284ddde098e80db965be55204 690 SMART SM00091 144 210 0.0099 T 14-10-2018 IPR000014 PAS domain XF_2624 9dff8cc284ddde098e80db965be55204 690 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 428 5.7E-13 T 14-10-2018 IPR000160 GGDEF domain XF_2624 9dff8cc284ddde098e80db965be55204 690 Gene3D G3DSA:3.20.20.450 432 690 1.0E-64 T 14-10-2018 IPR035919 EAL domain superfamily XF_2624 9dff8cc284ddde098e80db965be55204 690 SUPERFAMILY SSF55785 132 251 3.24E-13 T 14-10-2018 IPR035965 PAS domain superfamily XF_2624 9dff8cc284ddde098e80db965be55204 690 Gene3D G3DSA:3.30.450.20 131 253 2.0E-13 T 14-10-2018 XF_0235 576daf0608bb1482be1674ea25befd9a 892 Gene3D G3DSA:3.30.56.50 3 52 2.2E-10 T 14-10-2018 XF_0235 576daf0608bb1482be1674ea25befd9a 892 Gene3D G3DSA:3.40.50.10050 686 792 9.2E-33 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily XF_0235 576daf0608bb1482be1674ea25befd9a 892 SUPERFAMILY SSF46955 4 52 4.21E-9 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily XF_0235 576daf0608bb1482be1674ea25befd9a 892 Pfam PF00009 Elongation factor Tu GTP binding domain 396 551 1.8E-32 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_0235 576daf0608bb1482be1674ea25befd9a 892 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 309 892 1.2E-240 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 XF_0235 576daf0608bb1482be1674ea25befd9a 892 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 69 105 6.3E-9 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial XF_0235 576daf0608bb1482be1674ea25befd9a 892 Gene3D G3DSA:2.40.30.10 793 891 1.7E-30 T 14-10-2018 XF_0235 576daf0608bb1482be1674ea25befd9a 892 SUPERFAMILY SSF52156 676 799 3.79E-33 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily XF_0235 576daf0608bb1482be1674ea25befd9a 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 315 365 1.3E-13 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal XF_0235 576daf0608bb1482be1674ea25befd9a 892 ProSitePatterns PS01176 Initiation factor 2 signature. 843 865 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 XF_0235 576daf0608bb1482be1674ea25befd9a 892 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 394 549 6.3E-30 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XF_0235 576daf0608bb1482be1674ea25befd9a 892 Gene3D G3DSA:3.40.50.300 389 561 2.8E-67 T 14-10-2018 XF_0235 576daf0608bb1482be1674ea25befd9a 892 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 890 16.588 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 XF_0235 576daf0608bb1482be1674ea25befd9a 892 Pfam PF11987 Translation-initiation factor 2 678 782 3.8E-33 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 XF_0235 576daf0608bb1482be1674ea25befd9a 892 SUPERFAMILY SSF52540 383 556 1.23E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0235 576daf0608bb1482be1674ea25befd9a 892 Gene3D G3DSA:2.40.30.10 562 679 7.3E-39 T 14-10-2018 XF_0235 576daf0608bb1482be1674ea25befd9a 892 SUPERFAMILY SSF50447 794 890 3.53E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XF_0235 576daf0608bb1482be1674ea25befd9a 892 SUPERFAMILY SSF50447 564 647 1.85E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 SUPERFAMILY SSF50249 115 197 4.53E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 SUPERFAMILY SSF50249 441 548 3.09E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 Gene3D G3DSA:2.40.50.140 281 369 6.5E-29 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 Gene3D G3DSA:2.40.50.140 370 456 1.5E-23 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 Gene3D G3DSA:2.40.50.140 110 195 1.3E-7 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 Gene3D G3DSA:2.40.50.140 18 109 3.5E-15 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 PIRSF PIRSF002111 5 546 6.9E-211 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 Pfam PF00575 S1 RNA binding domain 200 272 2.6E-22 T 14-10-2018 IPR003029 S1 domain GO:0003676 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 Pfam PF00575 S1 RNA binding domain 460 532 1.5E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 Pfam PF00575 S1 RNA binding domain 115 183 3.0E-10 T 14-10-2018 IPR003029 S1 domain GO:0003676 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 Pfam PF00575 S1 RNA binding domain 373 446 2.2E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 Pfam PF00575 S1 RNA binding domain 291 359 3.0E-22 T 14-10-2018 IPR003029 S1 domain GO:0003676 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 Pfam PF00575 S1 RNA binding domain 29 98 1.8E-5 T 14-10-2018 IPR003029 S1 domain GO:0003676 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 Gene3D G3DSA:2.40.50.140 457 538 2.1E-18 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 SUPERFAMILY SSF50249 12 124 1.57E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 SMART SM00316 202 272 5.4E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 SMART SM00316 461 532 1.6E-16 T 14-10-2018 IPR022967 RNA-binding domain, S1 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 SMART SM00316 374 446 1.4E-20 T 14-10-2018 IPR022967 RNA-binding domain, S1 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 SMART SM00316 31 99 8.3E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 SMART SM00316 287 359 6.4E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 SMART SM00316 115 183 7.7E-9 T 14-10-2018 IPR022967 RNA-binding domain, S1 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 SUPERFAMILY SSF50249 359 451 1.29E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 PRINTS PR00681 Ribosomal protein S1 signature 33 51 7.3E-85 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 PRINTS PR00681 Ribosomal protein S1 signature 120 136 7.3E-85 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 PRINTS PR00681 Ribosomal protein S1 signature 167 187 7.3E-85 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 PRINTS PR00681 Ribosomal protein S1 signature 342 360 7.3E-85 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 PRINTS PR00681 Ribosomal protein S1 signature 51 65 7.3E-85 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 PRINTS PR00681 Ribosomal protein S1 signature 302 321 7.3E-85 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 PRINTS PR00681 Ribosomal protein S1 signature 224 245 7.3E-85 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 PRINTS PR00681 Ribosomal protein S1 signature 96 115 7.3E-85 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 PRINTS PR00681 Ribosomal protein S1 signature 138 155 7.3E-85 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 SUPERFAMILY SSF50249 267 368 3.13E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 Gene3D G3DSA:2.40.50.140 199 280 8.7E-28 T 14-10-2018 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 14 532 6.9E-208 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 XF_2438 c7a63f52b74e0d0b40cb8f48919f9b6c 569 SUPERFAMILY SSF50249 202 287 7.26E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2580 69cb8b6388e24d4b83315a33ddc75f5b 266 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 XF_2580 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.8E-34 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2580 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.8E-34 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2580 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.8E-34 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2580 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.8E-34 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2580 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.8E-34 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2580 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.8E-34 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2580 69cb8b6388e24d4b83315a33ddc75f5b 266 Gene3D G3DSA:1.10.287.610 103 150 3.5E-86 T 14-10-2018 XF_2580 69cb8b6388e24d4b83315a33ddc75f5b 266 Pfam PF00318 Ribosomal protein S2 9 224 1.9E-88 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2580 69cb8b6388e24d4b83315a33ddc75f5b 266 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 39.201 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2580 69cb8b6388e24d4b83315a33ddc75f5b 266 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 XF_2580 69cb8b6388e24d4b83315a33ddc75f5b 266 SUPERFAMILY SSF52313 6 231 6.67E-89 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily XF_2580 69cb8b6388e24d4b83315a33ddc75f5b 266 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 3.5E-96 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2580 69cb8b6388e24d4b83315a33ddc75f5b 266 Gene3D G3DSA:3.40.50.10490 8 219 3.5E-86 T 14-10-2018 XF_1473 be6701ea42ea99a857a098866f5b2488 416 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 18 415 8.4E-176 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 XF_1473 be6701ea42ea99a857a098866f5b2488 416 PIRSF PIRSF005572 33 414 2.9E-48 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 XF_1473 be6701ea42ea99a857a098866f5b2488 416 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 227 246 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site XF_1473 be6701ea42ea99a857a098866f5b2488 416 Gene3D G3DSA:3.90.1150.10 20 408 2.4E-160 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XF_1473 be6701ea42ea99a857a098866f5b2488 416 Gene3D G3DSA:3.40.640.10 47 306 2.4E-160 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XF_1473 be6701ea42ea99a857a098866f5b2488 416 SUPERFAMILY SSF53383 15 413 9.59E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XF_1473 be6701ea42ea99a857a098866f5b2488 416 Pfam PF00266 Aminotransferase class-V 36 404 1.7E-146 T 14-10-2018 IPR000192 Aminotransferase class V domain XF_0818 c2b978c69e43b892bb950675c6625a7d 592 SUPERFAMILY SSF51445 24 372 3.24E-74 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily XF_0818 c2b978c69e43b892bb950675c6625a7d 592 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 174 183 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 XF_0818 c2b978c69e43b892bb950675c6625a7d 592 Gene3D G3DSA:2.60.40.290 506 592 1.9E-16 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 XF_0818 c2b978c69e43b892bb950675c6625a7d 592 Pfam PF00553 Cellulose binding domain 515 591 1.5E-14 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 XF_0818 c2b978c69e43b892bb950675c6625a7d 592 SUPERFAMILY SSF49384 508 591 1.19E-19 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 XF_0818 c2b978c69e43b892bb950675c6625a7d 592 Gene3D G3DSA:3.20.20.80 22 370 3.6E-115 T 14-10-2018 XF_0818 c2b978c69e43b892bb950675c6625a7d 592 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 36 343 3.3E-53 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 XF_0818 c2b978c69e43b892bb950675c6625a7d 592 SMART SM00637 512 591 3.6E-16 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 XF_0323 9dabc59d8309ccdf417a6e2f4c5561f3 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 300 9.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_0323 9dabc59d8309ccdf417a6e2f4c5561f3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 5.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_0323 9dabc59d8309ccdf417a6e2f4c5561f3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 5.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_0323 9dabc59d8309ccdf417a6e2f4c5561f3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 415 5.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_0323 9dabc59d8309ccdf417a6e2f4c5561f3 460 Pfam PF08521 Two-component sensor kinase N-terminal 26 166 5.7E-37 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal XF_0323 9dabc59d8309ccdf417a6e2f4c5561f3 460 SMART SM00387 352 459 4.3E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_0323 9dabc59d8309ccdf417a6e2f4c5561f3 460 Gene3D G3DSA:1.10.287.130 194 308 5.2E-15 T 14-10-2018 XF_0323 9dabc59d8309ccdf417a6e2f4c5561f3 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 456 1.1E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_0323 9dabc59d8309ccdf417a6e2f4c5561f3 460 SMART SM00388 242 307 9.5E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_0323 9dabc59d8309ccdf417a6e2f4c5561f3 460 Gene3D G3DSA:3.30.565.10 311 459 2.9E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0323 9dabc59d8309ccdf417a6e2f4c5561f3 460 SUPERFAMILY SSF55874 312 458 7.33E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0323 9dabc59d8309ccdf417a6e2f4c5561f3 460 SUPERFAMILY SSF47384 225 300 5.89E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XF_2562 5188264a7dc158f4e1a2006bea98baeb 112 Gene3D G3DSA:2.60.300.12 2 107 5.0E-31 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XF_2562 5188264a7dc158f4e1a2006bea98baeb 112 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 XF_2562 5188264a7dc158f4e1a2006bea98baeb 112 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 4.6E-15 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 XF_2562 5188264a7dc158f4e1a2006bea98baeb 112 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 5.1E-30 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 XF_2562 5188264a7dc158f4e1a2006bea98baeb 112 SUPERFAMILY SSF89360 1 95 9.61E-26 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XF_2453 e5db917b1852d37233ffba5f7968c1ba 476 SMART SM00363 27 85 9.8E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_2453 e5db917b1852d37233ffba5f7968c1ba 476 Gene3D G3DSA:3.30.70.1560 152 247 8.6E-47 T 14-10-2018 XF_2453 e5db917b1852d37233ffba5f7968c1ba 476 SUPERFAMILY SSF55120 86 263 1.06E-37 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_2453 e5db917b1852d37233ffba5f7968c1ba 476 Pfam PF00849 RNA pseudouridylate synthase 90 225 6.1E-16 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_2453 e5db917b1852d37233ffba5f7968c1ba 476 Gene3D G3DSA:3.10.290.10 23 79 4.2E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XF_2453 e5db917b1852d37233ffba5f7968c1ba 476 SUPERFAMILY SSF55174 25 113 4.56E-17 T 14-10-2018 XF_2453 e5db917b1852d37233ffba5f7968c1ba 476 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 94 258 1.5E-50 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 XF_2453 e5db917b1852d37233ffba5f7968c1ba 476 Pfam PF01479 S4 domain 27 72 5.3E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_2453 e5db917b1852d37233ffba5f7968c1ba 476 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 128 142 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 XF_2453 e5db917b1852d37233ffba5f7968c1ba 476 Gene3D G3DSA:3.30.70.580 92 254 8.6E-47 T 14-10-2018 XF_1819 c2480603d49ec6bf1f9a68f1fa64f8fd 380 Gene3D G3DSA:3.40.50.1100 94 190 5.3E-88 T 14-10-2018 XF_1819 c2480603d49ec6bf1f9a68f1fa64f8fd 380 Gene3D G3DSA:3.40.50.1100 57 343 5.3E-88 T 14-10-2018 XF_1819 c2480603d49ec6bf1f9a68f1fa64f8fd 380 SUPERFAMILY SSF53686 53 345 1.57E-78 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XF_1819 c2480603d49ec6bf1f9a68f1fa64f8fd 380 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 69 330 1.2E-69 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XF_2651 02cacf15d4669a8745034a7065c04854 748 SMART SM00981 79 177 2.6E-21 T 14-10-2018 IPR004114 THUMP domain GO:0003723 XF_2651 02cacf15d4669a8745034a7065c04854 748 Gene3D G3DSA:3.30.750.80 434 532 1.8E-30 T 14-10-2018 XF_2651 02cacf15d4669a8745034a7065c04854 748 Gene3D G3DSA:3.40.50.150 192 409 8.7E-122 T 14-10-2018 XF_2651 02cacf15d4669a8745034a7065c04854 748 Gene3D G3DSA:3.30.2130.30 28 297 8.7E-122 T 14-10-2018 XF_2651 02cacf15d4669a8745034a7065c04854 748 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 27 748 28.548 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 XF_2651 02cacf15d4669a8745034a7065c04854 748 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 526 700 1.0E-16 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 XF_2651 02cacf15d4669a8745034a7065c04854 748 Gene3D G3DSA:3.40.50.150 533 747 5.3E-62 T 14-10-2018 XF_2651 02cacf15d4669a8745034a7065c04854 748 PIRSF PIRSF037618 22 748 7.1E-255 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 XF_2651 02cacf15d4669a8745034a7065c04854 748 SUPERFAMILY SSF53335 167 413 1.77E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_2651 02cacf15d4669a8745034a7065c04854 748 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 222 233 - T 14-10-2018 IPR000241 Putative RNA methylase domain XF_2651 02cacf15d4669a8745034a7065c04854 748 Pfam PF01170 Putative RNA methylase family UPF0020 185 411 3.6E-35 T 14-10-2018 IPR000241 Putative RNA methylase domain XF_2651 02cacf15d4669a8745034a7065c04854 748 Pfam PF02926 THUMP domain 54 176 1.1E-10 T 14-10-2018 IPR004114 THUMP domain GO:0003723 XF_2651 02cacf15d4669a8745034a7065c04854 748 SUPERFAMILY SSF53335 438 744 5.78E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PIRSF PIRSF001336 1 625 1.6E-239 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 74 339 1.1E-44 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 Gene3D G3DSA:2.40.37.10 12 559 5.7E-213 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 270 286 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site XF_0144 cdd40d65cc909e176c592ca7a1437034 628 TIGRFAM TIGR01273 speA: arginine decarboxylase 3 623 1.4E-269 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 Gene3D G3DSA:3.20.20.10 65 344 5.7E-213 T 14-10-2018 IPR029066 PLP-binding barrel XF_0144 cdd40d65cc909e176c592ca7a1437034 628 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 1 624 40.958 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 534 555 1.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 88 102 1.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 192 214 1.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 319 336 1.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 456 477 1.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 481 506 1.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 64 79 1.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 142 157 1.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 168 189 1.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 SUPERFAMILY SSF50621 449 560 6.38E-6 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 SUPERFAMILY SSF51419 64 341 2.45E-61 T 14-10-2018 IPR029066 PLP-binding barrel XF_0144 cdd40d65cc909e176c592ca7a1437034 628 Gene3D G3DSA:1.20.58.930 361 452 5.7E-213 T 14-10-2018 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 329 348 5.3E-15 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 96 114 5.3E-15 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 235 248 5.3E-15 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 534 547 5.3E-15 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XF_0144 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 119 131 5.3E-15 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XF_1179 7ebe78fbf8505e69b725c35281691a96 506 SMART SM00382 211 393 1.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1179 7ebe78fbf8505e69b725c35281691a96 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 496 1.1E-181 T 14-10-2018 IPR004482 Mg chelatase-related protein XF_1179 7ebe78fbf8505e69b725c35281691a96 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 210 225 7.7E-7 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XF_1179 7ebe78fbf8505e69b725c35281691a96 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 290 304 7.7E-7 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XF_1179 7ebe78fbf8505e69b725c35281691a96 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 318 331 7.7E-7 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XF_1179 7ebe78fbf8505e69b725c35281691a96 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 342 354 7.7E-7 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XF_1179 7ebe78fbf8505e69b725c35281691a96 506 SUPERFAMILY SSF52540 191 501 5.28E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1179 7ebe78fbf8505e69b725c35281691a96 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 394 2.0E-95 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain XF_1179 7ebe78fbf8505e69b725c35281691a96 506 Gene3D G3DSA:3.40.50.300 186 499 4.8E-56 T 14-10-2018 XF_1179 7ebe78fbf8505e69b725c35281691a96 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 4.7E-41 T 14-10-2018 XF_1179 7ebe78fbf8505e69b725c35281691a96 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 404 496 3.3E-28 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain XF_1179 7ebe78fbf8505e69b725c35281691a96 506 SUPERFAMILY SSF54211 10 168 1.9E-28 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_0918 fb13f2ed0c5d4b979c263d2968e69d18 214 Gene3D G3DSA:2.160.10.10 99 214 8.2E-19 T 14-10-2018 XF_0918 fb13f2ed0c5d4b979c263d2968e69d18 214 SUPERFAMILY SSF51161 32 212 3.91E-29 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily XF_0918 fb13f2ed0c5d4b979c263d2968e69d18 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XF_0918 fb13f2ed0c5d4b979c263d2968e69d18 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 122 150 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XF_0918 fb13f2ed0c5d4b979c263d2968e69d18 214 Gene3D G3DSA:2.160.10.10 27 98 1.6E-12 T 14-10-2018 XF_0918 fb13f2ed0c5d4b979c263d2968e69d18 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XF_0918 fb13f2ed0c5d4b979c263d2968e69d18 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 74 102 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XF_0918 fb13f2ed0c5d4b979c263d2968e69d18 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 85 117 4.6E-5 T 14-10-2018 IPR001451 Hexapeptide repeat XF_0918 fb13f2ed0c5d4b979c263d2968e69d18 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 49 81 1.1E-6 T 14-10-2018 IPR001451 Hexapeptide repeat XF_0918 fb13f2ed0c5d4b979c263d2968e69d18 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 155 189 3.0E-5 T 14-10-2018 IPR001451 Hexapeptide repeat XF_0015 68ba72edef848223445b18463b1ce7ab 795 SUPERFAMILY SSF53474 537 794 1.38E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0015 68ba72edef848223445b18463b1ce7ab 795 Gene3D G3DSA:3.40.50.1820 534 791 2.7E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0015 68ba72edef848223445b18463b1ce7ab 795 Gene3D G3DSA:2.140.10.30 236 533 2.4E-29 T 14-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily XF_0015 68ba72edef848223445b18463b1ce7ab 795 SUPERFAMILY SSF82171 220 538 4.05E-33 T 14-10-2018 XF_0015 68ba72edef848223445b18463b1ce7ab 795 Pfam PF00326 Prolyl oligopeptidase family 599 794 7.4E-43 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 XF_0015 68ba72edef848223445b18463b1ce7ab 795 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 337 507 1.1E-17 T 14-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 XF_2146 a0e3e354031690975dcb187a020878ef 211 Pfam PF00929 Exonuclease 24 198 5.2E-24 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XF_2146 a0e3e354031690975dcb187a020878ef 211 Hamap MF_00157 Ribonuclease T [rnt]. 1 211 86.154 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 XF_2146 a0e3e354031690975dcb187a020878ef 211 TIGRFAM TIGR01298 RNaseT: ribonuclease T 14 210 1.0E-111 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 XF_2146 a0e3e354031690975dcb187a020878ef 211 Gene3D G3DSA:3.30.420.10 13 209 7.8E-47 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XF_2146 a0e3e354031690975dcb187a020878ef 211 SUPERFAMILY SSF53098 12 205 5.69E-52 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily XF_2146 a0e3e354031690975dcb187a020878ef 211 SMART SM00479 22 207 3.5E-19 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:3.30.70.1440 658 857 1.2E-230 T 14-10-2018 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 SUPERFAMILY SSF82714 710 795 5.36E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:3.30.70.1430 558 657 1.2E-230 T 14-10-2018 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 SUPERFAMILY SSF82866 298 493 3.53E-35 T 14-10-2018 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 4.9E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 4.9E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 4.9E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 4.9E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 4.9E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:1.20.1640.10 507 1009 1.2E-230 T 14-10-2018 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 SUPERFAMILY SSF82693 557 606 7.85E-5 T 14-10-2018 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 SUPERFAMILY SSF82693 144 328 1.31E-15 T 14-10-2018 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 SUPERFAMILY SSF82714 190 271 7.72E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 SUPERFAMILY SSF82693 45 138 5.06E-14 T 14-10-2018 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:3.30.2090.10 709 797 1.2E-230 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:1.20.1640.10 18 506 1.2E-230 T 14-10-2018 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 SUPERFAMILY SSF82866 793 1016 6.41E-41 T 14-10-2018 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 Pfam PF00873 AcrB/AcrD/AcrF family 9 1010 7.2E-149 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:3.30.2090.10 184 273 1.2E-230 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:3.30.70.1430 45 805 1.2E-230 T 14-10-2018 XF_2083 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:3.30.70.1320 142 331 1.2E-230 T 14-10-2018 XF_1894 94efacf52ef400502fcd656914124143 227 PIRSF PIRSF000370 16 227 8.8E-66 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 XF_1894 94efacf52ef400502fcd656914124143 227 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 18 227 8.0E-110 T 14-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE XF_1894 94efacf52ef400502fcd656914124143 227 Pfam PF13394 4Fe-4S single cluster domain 39 120 3.4E-10 T 14-10-2018 XF_1894 94efacf52ef400502fcd656914124143 227 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 18 224 36.515 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 XF_1894 94efacf52ef400502fcd656914124143 227 Gene3D G3DSA:3.20.20.70 17 221 3.3E-36 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_1894 94efacf52ef400502fcd656914124143 227 Pfam PF04055 Radical SAM superfamily 41 118 8.9E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XF_1894 94efacf52ef400502fcd656914124143 227 SUPERFAMILY SSF102114 41 118 1.7E-15 T 14-10-2018 XF_2636 bc50c9b59cb82b19d6afda45933b71c9 232 Pfam PF00687 Ribosomal protein L1p/L10e family 29 220 1.3E-42 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein XF_2636 bc50c9b59cb82b19d6afda45933b71c9 232 PIRSF PIRSF002155 1 227 5.0E-66 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_2636 bc50c9b59cb82b19d6afda45933b71c9 232 Gene3D G3DSA:3.30.190.20 20 225 2.9E-73 T 14-10-2018 XF_2636 bc50c9b59cb82b19d6afda45933b71c9 232 SUPERFAMILY SSF56808 6 226 2.35E-71 T 14-10-2018 IPR023674 Ribosomal protein L1-like XF_2636 bc50c9b59cb82b19d6afda45933b71c9 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_2636 bc50c9b59cb82b19d6afda45933b71c9 232 Gene3D G3DSA:3.40.50.790 67 159 2.9E-73 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich XF_2636 bc50c9b59cb82b19d6afda45933b71c9 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 229 39.698 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 XF_2636 bc50c9b59cb82b19d6afda45933b71c9 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.9E-98 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 XF_1956 fa1f999fe536d3d7d35fd6ce3d064780 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 312 2.4E-145 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XF_1956 fa1f999fe536d3d7d35fd6ce3d064780 314 Gene3D G3DSA:3.30.1490.20 138 202 7.1E-105 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XF_1956 fa1f999fe536d3d7d35fd6ce3d064780 314 SUPERFAMILY SSF56059 124 311 6.06E-51 T 14-10-2018 XF_1956 fa1f999fe536d3d7d35fd6ce3d064780 314 Gene3D G3DSA:3.30.470.20 116 296 7.1E-105 T 14-10-2018 XF_1956 fa1f999fe536d3d7d35fd6ce3d064780 314 SUPERFAMILY SSF52440 3 122 2.65E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XF_1956 fa1f999fe536d3d7d35fd6ce3d064780 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 145.837 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XF_1956 fa1f999fe536d3d7d35fd6ce3d064780 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 3.0E-37 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XF_1956 fa1f999fe536d3d7d35fd6ce3d064780 314 Gene3D G3DSA:3.40.50.20 8 115 7.1E-105 T 14-10-2018 XF_1956 fa1f999fe536d3d7d35fd6ce3d064780 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 7.8E-73 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 PIRSF PIRSF036426 4 472 2.1E-198 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 Hamap MF_01646 Siroheme synthase [cysG]. 4 464 46.948 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 Gene3D G3DSA:3.40.50.720 5 115 1.1E-27 T 14-10-2018 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 220 454 6.6E-90 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 Gene3D G3DSA:3.40.1010.10 219 335 2.0E-43 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 Pfam PF14824 Sirohaem biosynthesis protein central 123 149 3.8E-7 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 222 432 1.0E-49 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 Pfam PF10414 Sirohaem synthase dimerisation region 154 211 1.7E-14 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 Gene3D G3DSA:3.30.950.10 336 468 4.0E-44 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 300 333 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 SUPERFAMILY SSF75615 118 214 1.83E-23 T 14-10-2018 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 Pfam PF13241 Putative NAD(P)-binding 9 119 4.4E-22 T 14-10-2018 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 7 211 7.6E-85 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 SUPERFAMILY SSF51735 7 115 9.7E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 Gene3D G3DSA:3.30.160.110 117 151 6.4E-14 T 14-10-2018 XF_0832 c7aabb9c1b9fcfe42abad9cde88a209e 476 SUPERFAMILY SSF53790 217 463 4.58E-77 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 XF_1181 907e6f5db7b541eb49322386390837f3 377 Gene3D G3DSA:3.40.50.1820 61 377 3.4E-83 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1181 907e6f5db7b541eb49322386390837f3 377 Pfam PF00561 alpha/beta hydrolase fold 70 202 2.6E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XF_1181 907e6f5db7b541eb49322386390837f3 377 SUPERFAMILY SSF53474 66 373 1.32E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1330 a1673a58ea6175895d0daae687471b50 1197 SUPERFAMILY SSF63829 395 641 1.4E-10 T 14-10-2018 XF_1330 a1673a58ea6175895d0daae687471b50 1197 Pfam PF07495 Y_Y_Y domain 690 751 2.4E-13 T 14-10-2018 IPR011123 Two component regulator three Y XF_1330 a1673a58ea6175895d0daae687471b50 1197 SMART SM00388 806 871 2.5E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_1330 a1673a58ea6175895d0daae687471b50 1197 Gene3D G3DSA:1.10.287.130 779 869 5.2E-23 T 14-10-2018 XF_1330 a1673a58ea6175895d0daae687471b50 1197 Pfam PF07494 Two component regulator propeller 171 192 0.0041 T 14-10-2018 IPR011110 Two component regulator propeller XF_1330 a1673a58ea6175895d0daae687471b50 1197 Pfam PF07494 Two component regulator propeller 36 59 8.3E-4 T 14-10-2018 IPR011110 Two component regulator propeller XF_1330 a1673a58ea6175895d0daae687471b50 1197 Gene3D G3DSA:3.30.565.10 870 1034 3.9E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_1330 a1673a58ea6175895d0daae687471b50 1197 SUPERFAMILY SSF47384 794 872 1.59E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XF_1330 a1673a58ea6175895d0daae687471b50 1197 SUPERFAMILY SSF55874 860 1032 5.5E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_1330 a1673a58ea6175895d0daae687471b50 1197 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 918 1032 1.7E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_1330 a1673a58ea6175895d0daae687471b50 1197 SUPERFAMILY SSF63829 39 241 1.96E-10 T 14-10-2018 XF_1330 a1673a58ea6175895d0daae687471b50 1197 Gene3D G3DSA:2.130.10.10 349 638 3.2E-30 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 XF_1330 a1673a58ea6175895d0daae687471b50 1197 Pfam PF00512 His Kinase A (phospho-acceptor) domain 806 871 6.6E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_1330 a1673a58ea6175895d0daae687471b50 1197 Gene3D G3DSA:2.130.10.10 27 325 3.0E-41 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 XF_1330 a1673a58ea6175895d0daae687471b50 1197 Pfam PF00072 Response regulator receiver domain 1059 1166 3.4E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1330 a1673a58ea6175895d0daae687471b50 1197 SUPERFAMILY SSF52172 1054 1178 2.99E-30 T 14-10-2018 IPR011006 CheY-like superfamily XF_1330 a1673a58ea6175895d0daae687471b50 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1018 1031 4.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1330 a1673a58ea6175895d0daae687471b50 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 994 1012 4.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1330 a1673a58ea6175895d0daae687471b50 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 976 986 4.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1330 a1673a58ea6175895d0daae687471b50 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 958 972 4.9E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1330 a1673a58ea6175895d0daae687471b50 1197 SMART SM00448 1056 1167 9.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1330 a1673a58ea6175895d0daae687471b50 1197 Gene3D G3DSA:2.60.40.10 657 762 3.6E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold XF_1330 a1673a58ea6175895d0daae687471b50 1197 Gene3D G3DSA:3.40.50.2300 1052 1179 6.7E-28 T 14-10-2018 XF_1330 a1673a58ea6175895d0daae687471b50 1197 SMART SM00387 918 1034 4.0E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_0680 21048f12ed6ea285c4e3933dfd8c94e4 472 Gene3D G3DSA:3.40.50.10810 4 220 7.6E-23 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily XF_0680 21048f12ed6ea285c4e3933dfd8c94e4 472 SMART SM00487 2 188 1.3E-6 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_0680 21048f12ed6ea285c4e3933dfd8c94e4 472 SUPERFAMILY SSF52540 2 200 3.94E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0680 21048f12ed6ea285c4e3933dfd8c94e4 472 Gene3D G3DSA:3.40.50.300 243 468 5.8E-17 T 14-10-2018 XF_0680 21048f12ed6ea285c4e3933dfd8c94e4 472 Pfam PF00176 SNF2 family N-terminal domain 25 264 1.3E-16 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 XF_0680 21048f12ed6ea285c4e3933dfd8c94e4 472 SUPERFAMILY SSF52540 117 456 8.44E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1829 159272adfd34a5a0a186f4f783223eb6 222 SUPERFAMILY SSF53474 14 218 2.68E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1829 159272adfd34a5a0a186f4f783223eb6 222 Gene3D G3DSA:3.40.50.1820 3 222 4.3E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1829 159272adfd34a5a0a186f4f783223eb6 222 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 67 143 2.6E-5 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 XF_0963 c39e117db6b4319fa81aa88db9b011d3 318 PRINTS PR00146 Dihydrodipicolinate synthase signature 145 162 2.1E-25 T 14-10-2018 IPR002220 DapA-like GO:0016829 XF_0963 c39e117db6b4319fa81aa88db9b011d3 318 PRINTS PR00146 Dihydrodipicolinate synthase signature 120 136 2.1E-25 T 14-10-2018 IPR002220 DapA-like GO:0016829 XF_0963 c39e117db6b4319fa81aa88db9b011d3 318 PRINTS PR00146 Dihydrodipicolinate synthase signature 52 73 2.1E-25 T 14-10-2018 IPR002220 DapA-like GO:0016829 XF_0963 c39e117db6b4319fa81aa88db9b011d3 318 PRINTS PR00146 Dihydrodipicolinate synthase signature 88 106 2.1E-25 T 14-10-2018 IPR002220 DapA-like GO:0016829 XF_0963 c39e117db6b4319fa81aa88db9b011d3 318 Pfam PF00701 Dihydrodipicolinate synthetase family 19 293 2.3E-75 T 14-10-2018 IPR002220 DapA-like GO:0016829 XF_0963 c39e117db6b4319fa81aa88db9b011d3 318 PIRSF PIRSF001365 17 312 1.0E-76 T 14-10-2018 IPR002220 DapA-like GO:0016829 XF_0963 c39e117db6b4319fa81aa88db9b011d3 318 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 22 294 2.7E-77 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XF_0963 c39e117db6b4319fa81aa88db9b011d3 318 SMART SM01130 18 305 9.3E-105 T 14-10-2018 IPR002220 DapA-like GO:0016829 XF_0963 c39e117db6b4319fa81aa88db9b011d3 318 Gene3D G3DSA:3.20.20.70 18 305 5.9E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_0963 c39e117db6b4319fa81aa88db9b011d3 318 SUPERFAMILY SSF51569 17 300 9.21E-82 T 14-10-2018 XF_0963 c39e117db6b4319fa81aa88db9b011d3 318 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 18 303 50.273 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XF_0963 c39e117db6b4319fa81aa88db9b011d3 318 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 55 72 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XF_0963 c39e117db6b4319fa81aa88db9b011d3 318 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 150 180 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 XF_1801 6789c38f78525089e52b7d1abd9a839a 189 Gene3D G3DSA:3.10.420.10 19 184 6.5E-53 T 14-10-2018 IPR035958 SecB-like superfamily XF_1801 6789c38f78525089e52b7d1abd9a839a 189 Hamap MF_00821 Protein-export protein SecB [secB]. 18 172 31.28 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XF_1801 6789c38f78525089e52b7d1abd9a839a 189 SUPERFAMILY SSF54611 36 167 1.35E-45 T 14-10-2018 IPR035958 SecB-like superfamily XF_1801 6789c38f78525089e52b7d1abd9a839a 189 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 124 146 5.4E-36 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XF_1801 6789c38f78525089e52b7d1abd9a839a 189 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 100 120 5.4E-36 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XF_1801 6789c38f78525089e52b7d1abd9a839a 189 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 150 168 5.4E-36 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XF_1801 6789c38f78525089e52b7d1abd9a839a 189 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 40 57 5.4E-36 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XF_1801 6789c38f78525089e52b7d1abd9a839a 189 Pfam PF02556 Preprotein translocase subunit SecB 35 170 2.8E-51 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XF_1801 6789c38f78525089e52b7d1abd9a839a 189 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 36 168 5.3E-46 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XF_1323 6de97c7cb8203cc7a6e40cc1d6331612 201 Pfam PF00583 Acetyltransferase (GNAT) family 29 137 8.1E-6 T 14-10-2018 IPR000182 GNAT domain XF_1323 6de97c7cb8203cc7a6e40cc1d6331612 201 SUPERFAMILY SSF55729 10 156 5.67E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase XF_1323 6de97c7cb8203cc7a6e40cc1d6331612 201 PIRSF PIRSF028520 1 173 5.6E-85 T 14-10-2018 IPR016890 Uncharacterised conserved protein UCP028520 XF_1323 6de97c7cb8203cc7a6e40cc1d6331612 201 Gene3D G3DSA:3.40.630.30 9 173 9.6E-15 T 14-10-2018 XF_0615 d0a9b693b4654c4923966ca881821332 547 Gene3D G3DSA:3.50.7.10 192 372 1.1E-236 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily XF_0615 d0a9b693b4654c4923966ca881821332 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XF_0615 d0a9b693b4654c4923966ca881821332 547 PRINTS PR00298 60kDa chaperonin signature 27 53 1.3E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XF_0615 d0a9b693b4654c4923966ca881821332 547 PRINTS PR00298 60kDa chaperonin signature 83 110 1.3E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XF_0615 d0a9b693b4654c4923966ca881821332 547 PRINTS PR00298 60kDa chaperonin signature 350 375 1.3E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XF_0615 d0a9b693b4654c4923966ca881821332 547 PRINTS PR00298 60kDa chaperonin signature 268 291 1.3E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XF_0615 d0a9b693b4654c4923966ca881821332 547 PRINTS PR00298 60kDa chaperonin signature 398 419 1.3E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XF_0615 d0a9b693b4654c4923966ca881821332 547 SUPERFAMILY SSF52029 184 376 5.41E-83 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily XF_0615 d0a9b693b4654c4923966ca881821332 547 SUPERFAMILY SSF48592 7 521 2.42E-77 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily XF_0615 d0a9b693b4654c4923966ca881821332 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.8E-253 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XF_0615 d0a9b693b4654c4923966ca881821332 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 545 40.872 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XF_0615 d0a9b693b4654c4923966ca881821332 547 Gene3D G3DSA:3.30.260.10 136 410 1.1E-236 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily XF_0615 d0a9b693b4654c4923966ca881821332 547 SUPERFAMILY SSF54849 137 204 1.79E-25 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily XF_0615 d0a9b693b4654c4923966ca881821332 547 Gene3D G3DSA:1.10.560.10 8 521 1.1E-236 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily XF_0615 d0a9b693b4654c4923966ca881821332 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 4.7E-96 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 XF_0480 56aa142a04c18230ef36087f4a3597f1 390 SUPERFAMILY SSF56349 73 377 4.71E-29 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XF_0480 56aa142a04c18230ef36087f4a3597f1 390 Gene3D G3DSA:1.10.150.130 73 191 3.1E-8 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal XF_0480 56aa142a04c18230ef36087f4a3597f1 390 Gene3D G3DSA:1.10.443.10 213 378 3.5E-9 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XF_1166 25698774577e94c8918d1aa7d9cb6714 132 SUPERFAMILY SSF56047 2 131 2.35E-40 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1166 25698774577e94c8918d1aa7d9cb6714 132 Gene3D G3DSA:3.30.1490.10 76 131 8.5E-21 T 14-10-2018 XF_1166 25698774577e94c8918d1aa7d9cb6714 132 Pfam PF00410 Ribosomal protein S8 5 131 6.0E-42 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1166 25698774577e94c8918d1aa7d9cb6714 132 Gene3D G3DSA:3.30.1370.30 2 74 9.3E-23 T 14-10-2018 XF_1166 25698774577e94c8918d1aa7d9cb6714 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 28.273 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1166 25698774577e94c8918d1aa7d9cb6714 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_2440 2e786dd1103022091ad7488b256ec1e5 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.163 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2440 2e786dd1103022091ad7488b256ec1e5 41 SUPERFAMILY SSF57840 1 40 8.5E-14 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2440 2e786dd1103022091ad7488b256ec1e5 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 40 3.6E-9 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2440 2e786dd1103022091ad7488b256ec1e5 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2440 2e786dd1103022091ad7488b256ec1e5 41 Pfam PF00444 Ribosomal protein L36 1 40 8.0E-17 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0395 b68629e40d642c30b3e47652420c7754 154 Pfam PF00210 Ferritin-like domain 8 144 3.0E-37 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 XF_0395 b68629e40d642c30b3e47652420c7754 154 PIRSF PIRSF002560 1 154 3.5E-69 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XF_0395 b68629e40d642c30b3e47652420c7754 154 SUPERFAMILY SSF47240 1 152 1.24E-51 T 14-10-2018 IPR009078 Ferritin-like superfamily XF_0395 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 65 85 4.7E-66 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XF_0395 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 44 64 4.7E-66 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XF_0395 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 128 149 4.7E-66 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XF_0395 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 107 127 4.7E-66 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XF_0395 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 3 22 4.7E-66 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XF_0395 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 23 43 4.7E-66 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XF_0395 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 86 106 4.7E-66 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XF_0395 b68629e40d642c30b3e47652420c7754 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XF_0395 b68629e40d642c30b3e47652420c7754 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 151 9.6E-70 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XF_0395 b68629e40d642c30b3e47652420c7754 154 Gene3D G3DSA:1.20.1260.10 1 154 2.7E-66 T 14-10-2018 IPR012347 Ferritin-like XF_0752 c7491d918faec9dc27a3bb6ea9a4a3d0 621 Pfam PF03781 Sulfatase-modifying factor enzyme 1 348 619 1.1E-71 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 XF_0752 c7491d918faec9dc27a3bb6ea9a4a3d0 621 Gene3D G3DSA:3.90.1580.10 336 621 3.1E-69 T 14-10-2018 XF_0752 c7491d918faec9dc27a3bb6ea9a4a3d0 621 SUPERFAMILY SSF56436 347 619 3.06E-66 T 14-10-2018 IPR016187 C-type lectin fold XF_1950 10f9bceb6bcce76f65784d0138d3be7e 156 SUPERFAMILY SSF50341 5 113 1.83E-9 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 XF_1950 10f9bceb6bcce76f65784d0138d3be7e 156 Pfam PF01584 CheW-like domain 11 145 2.5E-10 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XF_0465 b444404221928035e1716ea32690dc61 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 3.3E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_0465 b444404221928035e1716ea32690dc61 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.3E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_0465 b444404221928035e1716ea32690dc61 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 159 3.0E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XF_0465 b444404221928035e1716ea32690dc61 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 178 344 5.0E-26 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XF_0465 b444404221928035e1716ea32690dc61 465 SUPERFAMILY SSF52540 1 166 1.48E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0465 b444404221928035e1716ea32690dc61 465 Hamap MF_00195 GTPase Der [der]. 2 437 36.059 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 XF_0465 b444404221928035e1716ea32690dc61 465 Gene3D G3DSA:3.40.50.300 5 167 1.1E-41 T 14-10-2018 XF_0465 b444404221928035e1716ea32690dc61 465 SMART SM00382 177 328 0.28 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_0465 b444404221928035e1716ea32690dc61 465 SMART SM00382 1 166 1.8 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_0465 b444404221928035e1716ea32690dc61 465 PIRSF PIRSF006485 1 442 3.3E-167 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 XF_0465 b444404221928035e1716ea32690dc61 465 Gene3D G3DSA:3.40.50.300 173 349 1.1E-47 T 14-10-2018 XF_0465 b444404221928035e1716ea32690dc61 465 SUPERFAMILY SSF52540 139 440 2.1E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0465 b444404221928035e1716ea32690dc61 465 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.2E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_0465 b444404221928035e1716ea32690dc61 465 Pfam PF01926 50S ribosome-binding GTPase 180 298 7.8E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_0465 b444404221928035e1716ea32690dc61 465 Gene3D G3DSA:3.30.300.20 354 436 5.1E-20 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta XF_0465 b444404221928035e1716ea32690dc61 465 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 355 434 2.3E-22 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like XF_0465 b444404221928035e1716ea32690dc61 465 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 434 8.0E-160 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 XF_1647 7a0760fd04b13a160e00755f589c62f0 547 Gene3D G3DSA:3.90.320.10 6 195 1.0E-19 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal XF_1647 7a0760fd04b13a160e00755f589c62f0 547 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 6 153 4.6E-21 T 14-10-2018 IPR017482 Putative phage-type endonuclease XF_1647 7a0760fd04b13a160e00755f589c62f0 547 Pfam PF09588 YqaJ-like viral recombinase domain 12 147 1.7E-10 T 14-10-2018 IPR019080 YqaJ viral recombinase XF_1647 7a0760fd04b13a160e00755f589c62f0 547 SUPERFAMILY SSF52980 1 154 5.25E-20 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XF_1647 7a0760fd04b13a160e00755f589c62f0 547 PIRSF PIRSF028503 1 547 0.0 T 14-10-2018 IPR016889 Uncharacterised conserved protein UCP028503 XF_1252 66be2dbd128f53ab902a18c24c3d2277 1641 SUPERFAMILY SSF48239 1156 1413 1.1E-25 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid XF_1252 66be2dbd128f53ab902a18c24c3d2277 1641 Pfam PF01835 MG2 domain 386 473 6.4E-20 T 14-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 XF_1252 66be2dbd128f53ab902a18c24c3d2277 1641 SMART SM01359 747 890 2.4E-33 T 14-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 XF_1252 66be2dbd128f53ab902a18c24c3d2277 1641 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 748 890 3.1E-14 T 14-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 XF_1252 66be2dbd128f53ab902a18c24c3d2277 1641 Pfam PF00207 Alpha-2-macroglobulin family 957 1042 2.0E-8 T 14-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 XF_1252 66be2dbd128f53ab902a18c24c3d2277 1641 Gene3D G3DSA:1.50.10.20 1151 1417 1.8E-14 T 14-10-2018 XF_1252 66be2dbd128f53ab902a18c24c3d2277 1641 SMART SM01360 954 1043 6.9E-23 T 14-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 XF_1252 66be2dbd128f53ab902a18c24c3d2277 1641 Gene3D G3DSA:2.60.40.1930 386 485 7.9E-7 T 14-10-2018 XF_1252 66be2dbd128f53ab902a18c24c3d2277 1641 PIRSF PIRSF038980 33 1640 0.0 T 14-10-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria XF_1252 66be2dbd128f53ab902a18c24c3d2277 1641 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 286 380 1.5E-21 T 14-10-2018 XF_1309 8a69125a0014086ff4d10917168e01f5 369 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 31 362 1.1E-159 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XF_1309 8a69125a0014086ff4d10917168e01f5 369 Pfam PF06723 MreB/Mbl protein 33 361 2.6E-150 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XF_1309 8a69125a0014086ff4d10917168e01f5 369 SMART SM00268 32 367 0.0086 T 14-10-2018 IPR004000 Actin family XF_1309 8a69125a0014086ff4d10917168e01f5 369 Gene3D G3DSA:3.30.420.40 181 344 1.1E-129 T 14-10-2018 XF_1309 8a69125a0014086ff4d10917168e01f5 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 214 234 5.7E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XF_1309 8a69125a0014086ff4d10917168e01f5 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 95 118 5.7E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XF_1309 8a69125a0014086ff4d10917168e01f5 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 75 93 5.7E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XF_1309 8a69125a0014086ff4d10917168e01f5 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 159 178 5.7E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XF_1309 8a69125a0014086ff4d10917168e01f5 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 327 353 5.7E-62 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XF_1309 8a69125a0014086ff4d10917168e01f5 369 Gene3D G3DSA:3.30.420.40 36 354 1.1E-129 T 14-10-2018 XF_1309 8a69125a0014086ff4d10917168e01f5 369 SUPERFAMILY SSF53067 31 175 2.33E-38 T 14-10-2018 XF_1309 8a69125a0014086ff4d10917168e01f5 369 Gene3D G3DSA:3.90.640.10 213 286 1.1E-129 T 14-10-2018 XF_1309 8a69125a0014086ff4d10917168e01f5 369 SUPERFAMILY SSF53067 177 362 6.71E-48 T 14-10-2018 XF_0173 49e19a77d328f11b0286bbfb797694b1 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 5.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0173 49e19a77d328f11b0286bbfb797694b1 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 5.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0173 49e19a77d328f11b0286bbfb797694b1 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 5.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0173 49e19a77d328f11b0286bbfb797694b1 251 SUPERFAMILY SSF51735 16 250 6.16E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0173 49e19a77d328f11b0286bbfb797694b1 251 Gene3D G3DSA:3.40.50.720 11 251 9.9E-72 T 14-10-2018 XF_0173 49e19a77d328f11b0286bbfb797694b1 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 17 198 2.0E-6 T 14-10-2018 XF_0173 49e19a77d328f11b0286bbfb797694b1 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 4.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0173 49e19a77d328f11b0286bbfb797694b1 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 4.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0173 49e19a77d328f11b0286bbfb797694b1 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0173 49e19a77d328f11b0286bbfb797694b1 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 4.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0173 49e19a77d328f11b0286bbfb797694b1 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 4.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0173 49e19a77d328f11b0286bbfb797694b1 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 4.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0173 49e19a77d328f11b0286bbfb797694b1 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 250 1.4E-51 T 14-10-2018 XF_a0042 8fa9e8ec79c1c2fc569e691f2ecf97f8 296 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 69 282 6.4E-78 T 14-10-2018 IPR014142 P-type conjugative transfer protein TrbG XF_a0042 8fa9e8ec79c1c2fc569e691f2ecf97f8 296 Gene3D G3DSA:2.60.40.2500 190 295 8.6E-7 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily XF_a0042 8fa9e8ec79c1c2fc569e691f2ecf97f8 296 Pfam PF03524 Conjugal transfer protein 71 294 7.5E-53 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX XF_2224 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 188 205 7.4E-23 T 14-10-2018 XF_2224 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 113 128 7.4E-23 T 14-10-2018 XF_2224 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 153 166 7.4E-23 T 14-10-2018 XF_2224 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 267 282 7.4E-23 T 14-10-2018 XF_2224 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 28 43 7.4E-23 T 14-10-2018 XF_2224 f7e78601f1c3d0a818bff89dd1712ac0 322 Pfam PF08544 GHMP kinases C terminal 227 300 3.4E-12 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain XF_2224 f7e78601f1c3d0a818bff89dd1712ac0 322 SUPERFAMILY SSF55060 187 301 2.64E-24 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XF_2224 f7e78601f1c3d0a818bff89dd1712ac0 322 SUPERFAMILY SSF54211 22 175 2.2E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_2224 f7e78601f1c3d0a818bff89dd1712ac0 322 Gene3D G3DSA:3.30.230.10 15 179 1.5E-42 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XF_2224 f7e78601f1c3d0a818bff89dd1712ac0 322 PIRSF PIRSF000676 17 321 3.3E-82 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 XF_2224 f7e78601f1c3d0a818bff89dd1712ac0 322 Hamap MF_00384 Homoserine kinase [thrB]. 23 322 25.914 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 XF_2224 f7e78601f1c3d0a818bff89dd1712ac0 322 Pfam PF00288 GHMP kinases N terminal domain 100 166 4.1E-12 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 XF_2224 f7e78601f1c3d0a818bff89dd1712ac0 322 Gene3D G3DSA:3.30.70.890 180 313 3.5E-31 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XF_2224 f7e78601f1c3d0a818bff89dd1712ac0 322 TIGRFAM TIGR00191 thrB: homoserine kinase 25 290 4.3E-51 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 XF_0647 5153cac6d5e97a6dd33b30695a5cb25a 218 TIGRFAM TIGR01083 nth: endonuclease III 11 200 1.5E-82 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 XF_0647 5153cac6d5e97a6dd33b30695a5cb25a 218 Gene3D G3DSA:1.10.1670.10 18 209 7.7E-75 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 XF_0647 5153cac6d5e97a6dd33b30695a5cb25a 218 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 40 172 3.4E-19 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XF_0647 5153cac6d5e97a6dd33b30695a5cb25a 218 Pfam PF00633 Helix-hairpin-helix motif 106 133 5.7E-8 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 XF_0647 5153cac6d5e97a6dd33b30695a5cb25a 218 Hamap MF_00942 Endonuclease III [nth]. 1 215 36.148 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 XF_0647 5153cac6d5e97a6dd33b30695a5cb25a 218 PIRSF PIRSF001435 5 217 2.3E-50 T 14-10-2018 XF_0647 5153cac6d5e97a6dd33b30695a5cb25a 218 SUPERFAMILY SSF48150 11 214 1.4E-71 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 XF_0647 5153cac6d5e97a6dd33b30695a5cb25a 218 ProSitePatterns PS01155 Endonuclease III family signature. 108 137 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 XF_0647 5153cac6d5e97a6dd33b30695a5cb25a 218 Gene3D G3DSA:1.10.340.30 27 138 7.7E-75 T 14-10-2018 XF_0647 5153cac6d5e97a6dd33b30695a5cb25a 218 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 193 209 4.0E-6 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 XF_0647 5153cac6d5e97a6dd33b30695a5cb25a 218 SMART SM00525 192 212 1.8E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 XF_0647 5153cac6d5e97a6dd33b30695a5cb25a 218 SMART SM00478 44 191 3.6E-51 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 SUPERFAMILY SSF53738 4 168 4.71E-45 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 1.0E-43 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 Gene3D G3DSA:3.40.120.10 176 363 3.1E-62 T 14-10-2018 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 387 444 3.0E-10 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 365 1.7E-29 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 256 2.2E-18 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 447 44.983 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 SUPERFAMILY SSF55957 360 447 3.79E-17 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 SUPERFAMILY SSF53738 158 258 2.51E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 Gene3D G3DSA:3.40.120.10 3 156 7.4E-48 T 14-10-2018 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 Gene3D G3DSA:3.40.120.10 259 341 3.1E-62 T 14-10-2018 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 SUPERFAMILY SSF53738 260 364 1.73E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 Gene3D G3DSA:3.30.310.50 372 448 8.0E-18 T 14-10-2018 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 5.2E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 5.2E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 5.2E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_1468 bb5e8f80ecbbe02e29ea23a839b6f659 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 445 8.5E-203 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_2217 dd59de563eeab12486c3b6a9901897cb 375 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 339 351 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XF_2217 dd59de563eeab12486c3b6a9901897cb 375 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 1 375 48.402 T 14-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 XF_2217 dd59de563eeab12486c3b6a9901897cb 375 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 146 4.0E-18 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 XF_2217 dd59de563eeab12486c3b6a9901897cb 375 SUPERFAMILY SSF54211 169 253 8.35E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_2217 dd59de563eeab12486c3b6a9901897cb 375 Gene3D G3DSA:3.30.230.40 275 375 4.1E-36 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 XF_2217 dd59de563eeab12486c3b6a9901897cb 375 SUPERFAMILY SSF54211 276 361 2.91E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_2217 dd59de563eeab12486c3b6a9901897cb 375 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 357 2.2E-63 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XF_2217 dd59de563eeab12486c3b6a9901897cb 375 Gene3D G3DSA:3.40.50.1000 1 152 2.0E-34 T 14-10-2018 IPR023214 HAD superfamily XF_2217 dd59de563eeab12486c3b6a9901897cb 375 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XF_2217 dd59de563eeab12486c3b6a9901897cb 375 SUPERFAMILY SSF56784 1 149 8.95E-34 T 14-10-2018 IPR036412 HAD-like superfamily XF_2217 dd59de563eeab12486c3b6a9901897cb 375 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 375 36.289 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XF_2217 dd59de563eeab12486c3b6a9901897cb 375 Gene3D G3DSA:3.30.230.40 156 256 5.9E-38 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 XF_2217 dd59de563eeab12486c3b6a9901897cb 375 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 143 5.2E-34 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 XF_2217 dd59de563eeab12486c3b6a9901897cb 375 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 164 1.2E-73 T 14-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 XF_2635 369aa3a2702265d6c4241b720641a153 138 Gene3D G3DSA:3.30.70.1730 1 96 7.1E-19 T 14-10-2018 XF_2635 369aa3a2702265d6c4241b720641a153 138 Pfam PF00466 Ribosomal protein L10 1 64 3.2E-13 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 XF_2635 369aa3a2702265d6c4241b720641a153 138 SUPERFAMILY SSF160369 1 123 3.53E-30 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 16 487 8.7E-154 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.8E-35 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 337 1.8E-35 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 19 38 1.8E-35 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 302 1.8E-35 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 195 213 1.8E-35 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 445 2.4E-72 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 57 72 2.4E-72 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 2.4E-72 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 386 2.4E-72 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 18 40 2.4E-72 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 195 220 2.4E-72 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 301 2.4E-72 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 330 337 2.4E-72 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 452 472 2.4E-72 T 14-10-2018 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 Gene3D G3DSA:3.50.50.60 17 355 1.5E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 17 350 2.5E-65 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 SUPERFAMILY SSF51905 11 359 1.13E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 Gene3D G3DSA:3.30.390.30 368 490 3.9E-44 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 Gene3D G3DSA:3.50.50.60 175 300 1.5E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 PIRSF PIRSF000350 2 488 1.9E-80 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 SUPERFAMILY SSF55424 367 487 3.44E-41 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 369 477 3.3E-36 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 XF_1548 dbe00e3d1aa8962a6e0e2ef799d1a0c6 490 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 58 68 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 XF_a0011 572bc592d033b5522d74a5a27ce7e5be 348 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 46 266 3.0E-50 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 XF_0347 ae0a896c12e7f639b485862fe7e2958f 461 SUPERFAMILY SSF56176 7 219 9.81E-71 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XF_0347 ae0a896c12e7f639b485862fe7e2958f 461 Pfam PF01565 FAD binding domain 44 182 7.0E-42 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 XF_0347 ae0a896c12e7f639b485862fe7e2958f 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 457 5.6E-70 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 XF_0347 ae0a896c12e7f639b485862fe7e2958f 461 Gene3D G3DSA:3.30.465.40 8 237 2.1E-72 T 14-10-2018 XF_0347 ae0a896c12e7f639b485862fe7e2958f 461 Gene3D G3DSA:1.10.45.10 418 458 4.8E-16 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 XF_0347 ae0a896c12e7f639b485862fe7e2958f 461 Gene3D G3DSA:3.30.70.2740 336 417 2.5E-17 T 14-10-2018 XF_0347 ae0a896c12e7f639b485862fe7e2958f 461 SUPERFAMILY SSF55103 192 459 3.6E-61 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 XF_2176 28b523e385e23949f917233cd862bdf8 887 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 232 427 3.2E-68 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 XF_2176 28b523e385e23949f917233cd862bdf8 887 Gene3D G3DSA:3.90.740.10 238 439 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XF_2176 28b523e385e23949f917233cd862bdf8 887 Gene3D G3DSA:3.10.330.110 592 654 0.0 T 14-10-2018 XF_2176 28b523e385e23949f917233cd862bdf8 887 Gene3D G3DSA:3.10.20.590 825 887 1.3E-20 T 14-10-2018 XF_2176 28b523e385e23949f917233cd862bdf8 887 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 16 886 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XF_2176 28b523e385e23949f917233cd862bdf8 887 SUPERFAMILY SSF52374 15 692 1.21E-145 T 14-10-2018 XF_2176 28b523e385e23949f917233cd862bdf8 887 Gene3D G3DSA:3.40.50.620 44 591 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_2176 28b523e385e23949f917233cd862bdf8 887 SUPERFAMILY SSF50677 237 440 1.67E-49 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XF_2176 28b523e385e23949f917233cd862bdf8 887 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 15 886 23.302 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XF_2176 28b523e385e23949f917233cd862bdf8 887 SUPERFAMILY SSF47323 689 885 4.11E-31 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2176 28b523e385e23949f917233cd862bdf8 887 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 644 682 3.0E-6 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2176 28b523e385e23949f917233cd862bdf8 887 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 182 1.8E-26 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2176 28b523e385e23949f917233cd862bdf8 887 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 442 598 2.7E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2176 28b523e385e23949f917233cd862bdf8 887 PRINTS PR00985 Leucyl-tRNA synthetase signature 164 180 7.0E-46 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XF_2176 28b523e385e23949f917233cd862bdf8 887 PRINTS PR00985 Leucyl-tRNA synthetase signature 196 209 7.0E-46 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XF_2176 28b523e385e23949f917233cd862bdf8 887 PRINTS PR00985 Leucyl-tRNA synthetase signature 138 155 7.0E-46 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XF_2176 28b523e385e23949f917233cd862bdf8 887 PRINTS PR00985 Leucyl-tRNA synthetase signature 226 245 7.0E-46 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XF_2176 28b523e385e23949f917233cd862bdf8 887 PRINTS PR00985 Leucyl-tRNA synthetase signature 549 571 7.0E-46 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XF_2176 28b523e385e23949f917233cd862bdf8 887 PRINTS PR00985 Leucyl-tRNA synthetase signature 512 530 7.0E-46 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XF_2176 28b523e385e23949f917233cd862bdf8 887 PRINTS PR00985 Leucyl-tRNA synthetase signature 582 592 7.0E-46 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XF_2176 28b523e385e23949f917233cd862bdf8 887 Pfam PF08264 Anticodon-binding domain of tRNA 728 848 1.2E-14 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 XF_2176 28b523e385e23949f917233cd862bdf8 887 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 53 64 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2176 28b523e385e23949f917233cd862bdf8 887 Gene3D G3DSA:1.10.730.10 19 818 0.0 T 14-10-2018 XF_0794 22a7535612f184b803bb72d0926ddb41 468 SUPERFAMILY SSF53623 103 314 7.46E-51 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XF_0794 22a7535612f184b803bb72d0926ddb41 468 Gene3D G3DSA:3.90.190.20 319 461 4.3E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XF_0794 22a7535612f184b803bb72d0926ddb41 468 SUPERFAMILY SSF53244 320 457 9.39E-30 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XF_0794 22a7535612f184b803bb72d0926ddb41 468 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 458 30.586 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_0794 22a7535612f184b803bb72d0926ddb41 468 Pfam PF08245 Mur ligase middle domain 107 300 2.2E-41 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XF_0794 22a7535612f184b803bb72d0926ddb41 468 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 457 2.0E-135 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_0794 22a7535612f184b803bb72d0926ddb41 468 Pfam PF02875 Mur ligase family, glutamate ligase domain 331 398 9.7E-9 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XF_0794 22a7535612f184b803bb72d0926ddb41 468 Pfam PF01225 Mur ligase family, catalytic domain 24 94 6.3E-5 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XF_0794 22a7535612f184b803bb72d0926ddb41 468 SUPERFAMILY SSF63418 3 95 1.27E-20 T 14-10-2018 IPR035911 MurE/MurF, N-terminal XF_0794 22a7535612f184b803bb72d0926ddb41 468 Gene3D G3DSA:3.40.1390.10 1 81 3.0E-21 T 14-10-2018 XF_0794 22a7535612f184b803bb72d0926ddb41 468 Gene3D G3DSA:3.40.1190.10 82 316 8.8E-66 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 Gene3D G3DSA:2.40.50.140 131 188 2.9E-19 T 14-10-2018 XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 Pfam PF09285 Elongation factor P, C-terminal 132 187 8.6E-19 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 SUPERFAMILY SSF50249 69 129 2.06E-9 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 Gene3D G3DSA:2.40.50.140 67 129 8.6E-14 T 14-10-2018 XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 SUPERFAMILY SSF50249 131 188 9.42E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 SUPERFAMILY SSF50104 2 63 7.82E-9 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 SMART SM00841 132 187 1.0E-20 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 Gene3D G3DSA:2.30.30.30 1 63 1.3E-7 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 4.0E-11 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 123 1.6E-12 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 PIRSF PIRSF005901 1 189 4.4E-62 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 36.271 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 SMART SM01185 69 124 2.1E-13 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 1.8E-97 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP XF_2203 8c45525c6c6258f89262af7b1e0fcd2c 189 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site XF_0434 6a8117129b61da3c0cebbb7d76adc1ae 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 23.098 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0434 6a8117129b61da3c0cebbb7d76adc1ae 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_0434 6a8117129b61da3c0cebbb7d76adc1ae 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.0E-24 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0434 6a8117129b61da3c0cebbb7d76adc1ae 71 Pfam PF01165 Ribosomal protein S21 3 56 1.8E-22 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0434 6a8117129b61da3c0cebbb7d76adc1ae 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 1.0E-9 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0434 6a8117129b61da3c0cebbb7d76adc1ae 71 Gene3D G3DSA:1.20.5.1150 16 54 2.7E-20 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0434 6a8117129b61da3c0cebbb7d76adc1ae 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 8.3E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0434 6a8117129b61da3c0cebbb7d76adc1ae 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 8.3E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0434 6a8117129b61da3c0cebbb7d76adc1ae 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 8.3E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0434 6a8117129b61da3c0cebbb7d76adc1ae 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 8.3E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1316 b0f1dc7779d99550ea68f58bba6fa96e 718 Pfam PF13291 ACT domain 639 716 2.8E-14 T 14-10-2018 IPR002912 ACT domain XF_1316 b0f1dc7779d99550ea68f58bba6fa96e 718 Pfam PF02824 TGS domain 394 452 5.0E-20 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 XF_1316 b0f1dc7779d99550ea68f58bba6fa96e 718 Pfam PF04607 Region found in RelA / SpoT proteins 241 351 1.9E-37 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 XF_1316 b0f1dc7779d99550ea68f58bba6fa96e 718 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 120 715 2.4E-158 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 XF_1316 b0f1dc7779d99550ea68f58bba6fa96e 718 Pfam PF13328 HD domain 44 182 3.4E-16 T 14-10-2018 IPR003607 HD/PDEase domain XF_1316 b0f1dc7779d99550ea68f58bba6fa96e 718 SUPERFAMILY SSF55021 641 716 2.75E-7 T 14-10-2018 XF_1316 b0f1dc7779d99550ea68f58bba6fa96e 718 Gene3D G3DSA:3.30.460.10 199 331 5.0E-48 T 14-10-2018 XF_1316 b0f1dc7779d99550ea68f58bba6fa96e 718 SUPERFAMILY SSF109604 40 197 7.22E-24 T 14-10-2018 XF_1316 b0f1dc7779d99550ea68f58bba6fa96e 718 Gene3D G3DSA:3.30.70.260 639 718 5.9E-10 T 14-10-2018 XF_1316 b0f1dc7779d99550ea68f58bba6fa96e 718 Gene3D G3DSA:1.10.3210.10 50 197 9.1E-21 T 14-10-2018 XF_1316 b0f1dc7779d99550ea68f58bba6fa96e 718 SUPERFAMILY SSF81271 387 452 2.03E-19 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XF_1316 b0f1dc7779d99550ea68f58bba6fa96e 718 Gene3D G3DSA:3.10.20.30 386 462 2.8E-30 T 14-10-2018 IPR012675 Beta-grasp domain superfamily XF_1316 b0f1dc7779d99550ea68f58bba6fa96e 718 SMART SM00954 241 351 2.5E-66 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 XF_1316 b0f1dc7779d99550ea68f58bba6fa96e 718 SUPERFAMILY SSF81301 199 370 6.38E-62 T 14-10-2018 XF_2606 c92205f9dcce07214c4a47bd4f2be965 330 Gene3D G3DSA:3.30.2350.10 102 330 1.0E-65 T 14-10-2018 XF_2606 c92205f9dcce07214c4a47bd4f2be965 330 Gene3D G3DSA:3.10.290.10 19 81 2.1E-18 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XF_2606 c92205f9dcce07214c4a47bd4f2be965 330 Pfam PF00849 RNA pseudouridylate synthase 111 266 5.6E-26 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_2606 c92205f9dcce07214c4a47bd4f2be965 330 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 148 162 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_2606 c92205f9dcce07214c4a47bd4f2be965 330 SUPERFAMILY SSF55174 29 80 3.4E-10 T 14-10-2018 XF_2606 c92205f9dcce07214c4a47bd4f2be965 330 SMART SM00363 30 89 7.1E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_2606 c92205f9dcce07214c4a47bd4f2be965 330 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 26 329 6.5E-69 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_2606 c92205f9dcce07214c4a47bd4f2be965 330 Pfam PF01479 S4 domain 30 76 2.9E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_2606 c92205f9dcce07214c4a47bd4f2be965 330 SUPERFAMILY SSF55120 100 329 1.34E-55 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_2206 784138849ad9dcd6f85be7160fedbf2a 413 Gene3D G3DSA:3.40.50.720 16 314 2.1E-104 T 14-10-2018 XF_2206 784138849ad9dcd6f85be7160fedbf2a 413 SUPERFAMILY SSF51735 110 297 6.63E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2206 784138849ad9dcd6f85be7160fedbf2a 413 SUPERFAMILY SSF52283 10 137 2.1E-44 T 14-10-2018 XF_2206 784138849ad9dcd6f85be7160fedbf2a 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 296 3.6E-51 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 XF_2206 784138849ad9dcd6f85be7160fedbf2a 413 SUPERFAMILY SSF55021 335 412 8.4E-15 T 14-10-2018 XF_2206 784138849ad9dcd6f85be7160fedbf2a 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 202 224 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site XF_2206 784138849ad9dcd6f85be7160fedbf2a 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 328 2.1E-35 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 XF_2206 784138849ad9dcd6f85be7160fedbf2a 413 Gene3D G3DSA:3.40.50.720 111 299 2.1E-104 T 14-10-2018 XF_2206 784138849ad9dcd6f85be7160fedbf2a 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 156 183 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XF_2206 784138849ad9dcd6f85be7160fedbf2a 413 Gene3D G3DSA:3.30.70.260 330 412 5.7E-28 T 14-10-2018 XF_1294 edeb91c44146c2205f39b5eaa88a98d6 176 Pfam PF02542 YgbB family 15 168 1.2E-61 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XF_1294 edeb91c44146c2205f39b5eaa88a98d6 176 Gene3D G3DSA:3.30.1330.50 13 175 5.4E-66 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XF_1294 edeb91c44146c2205f39b5eaa88a98d6 176 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 16 169 4.2E-69 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XF_1294 edeb91c44146c2205f39b5eaa88a98d6 176 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 15 170 34.492 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XF_1294 edeb91c44146c2205f39b5eaa88a98d6 176 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 49 64 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XF_1294 edeb91c44146c2205f39b5eaa88a98d6 176 SUPERFAMILY SSF69765 14 171 1.96E-63 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 286 340 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 Gene3D G3DSA:1.20.210.10 37 571 4.4E-189 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 62 510 2.3E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 PRINTS PR01165 Cytochrome c oxidase subunit I signature 204 222 2.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 PRINTS PR01165 Cytochrome c oxidase subunit I signature 284 305 2.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 PRINTS PR01165 Cytochrome c oxidase subunit I signature 233 252 2.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 PRINTS PR01165 Cytochrome c oxidase subunit I signature 417 436 2.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 PRINTS PR01165 Cytochrome c oxidase subunit I signature 103 126 2.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 PRINTS PR01165 Cytochrome c oxidase subunit I signature 53 78 2.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 PRINTS PR01165 Cytochrome c oxidase subunit I signature 130 154 2.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 PRINTS PR01165 Cytochrome c oxidase subunit I signature 467 488 2.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 PRINTS PR01165 Cytochrome c oxidase subunit I signature 389 407 2.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 PRINTS PR01165 Cytochrome c oxidase subunit I signature 172 184 2.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 PRINTS PR01165 Cytochrome c oxidase subunit I signature 330 345 2.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 PRINTS PR01165 Cytochrome c oxidase subunit I signature 354 375 2.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 9 653 0.0 T 14-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 XF_1389 8ae5df3c4557e221579952b64e4e344b 672 SUPERFAMILY SSF81442 49 564 6.54E-177 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_0966 69e1d316ca6c37f0c7aa0ea54fa5b87c 185 SUPERFAMILY SSF54523 8 147 4.71E-17 T 14-10-2018 XF_0966 69e1d316ca6c37f0c7aa0ea54fa5b87c 185 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0966 69e1d316ca6c37f0c7aa0ea54fa5b87c 185 Gene3D G3DSA:3.30.700.10 7 147 1.5E-8 T 14-10-2018 XF_0966 69e1d316ca6c37f0c7aa0ea54fa5b87c 185 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 6.7E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0966 69e1d316ca6c37f0c7aa0ea54fa5b87c 185 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 3.5E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0966 69e1d316ca6c37f0c7aa0ea54fa5b87c 185 Pfam PF12019 Type II transport protein GspH 48 159 6.6E-15 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 XF_2071 54d38bcbebd224d3eb09b89319a520bf 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 73 3.6E-29 T 14-10-2018 IPR022789 Antitoxin ParD XF_2071 54d38bcbebd224d3eb09b89319a520bf 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 78 1.6E-41 T 14-10-2018 IPR022789 Antitoxin ParD XF_2071 54d38bcbebd224d3eb09b89319a520bf 80 SUPERFAMILY SSF47598 5 45 2.33E-8 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XF_2071 54d38bcbebd224d3eb09b89319a520bf 80 Gene3D G3DSA:1.10.8.1250 10 80 7.8E-24 T 14-10-2018 IPR038296 Antitoxin ParD superfamily XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Pfam PF00384 Molybdopterin oxidoreductase 445 608 6.0E-9 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Pfam PF00384 Molybdopterin oxidoreductase 285 414 1.5E-13 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 89 3.3E-19 T 14-10-2018 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 SUPERFAMILY SSF54862 89 223 6.7E-37 T 14-10-2018 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 SUPERFAMILY SSF53706 226 630 2.22E-74 T 14-10-2018 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 SMART SM00929 96 136 3.4E-20 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 44 61 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Gene3D G3DSA:3.10.20.740 14 136 1.0E-40 T 14-10-2018 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 111 123 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Gene3D G3DSA:3.40.50.740 226 424 1.2E-9 T 14-10-2018 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 SUPERFAMILY SSF50692 678 735 8.36E-10 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Gene3D G3DSA:3.40.50.740 432 637 6.4E-12 T 14-10-2018 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Gene3D G3DSA:3.30.70.20 138 217 1.3E-7 T 14-10-2018 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 17 607 9.1E-211 T 14-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 SUPERFAMILY SSF54292 15 87 1.72E-18 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Pfam PF01568 Molydopterin dinucleotide binding domain 676 730 2.4E-8 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 158 168 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 96 133 1.4E-16 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0311 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Gene3D G3DSA:2.40.40.20 638 739 1.2E-7 T 14-10-2018 XF_1905 9058a63053f415270687e5888a24022c 204 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 35 188 9.0E-51 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XF_1905 9058a63053f415270687e5888a24022c 204 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 159 3.0E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XF_1905 9058a63053f415270687e5888a24022c 204 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 36 49 3.0E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XF_1905 9058a63053f415270687e5888a24022c 204 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 94 110 3.0E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XF_1905 9058a63053f415270687e5888a24022c 204 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 116 132 3.0E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XF_1905 9058a63053f415270687e5888a24022c 204 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 171 183 3.0E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XF_1905 9058a63053f415270687e5888a24022c 204 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 33 186 42.632 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XF_1905 9058a63053f415270687e5888a24022c 204 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 35 183 4.1E-47 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XF_1905 9058a63053f415270687e5888a24022c 204 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 146 180 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 XF_1905 9058a63053f415270687e5888a24022c 204 SUPERFAMILY SSF53098 34 187 8.65E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily XF_1905 9058a63053f415270687e5888a24022c 204 Gene3D G3DSA:3.30.420.10 35 191 7.0E-42 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XF_2426 90f9a0a748f777c39f3afd0ee5057fdf 965 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 925 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 XF_2426 90f9a0a748f777c39f3afd0ee5057fdf 965 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_2426 90f9a0a748f777c39f3afd0ee5057fdf 965 SUPERFAMILY SSF52540 5 570 5.76E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2426 90f9a0a748f777c39f3afd0ee5057fdf 965 Gene3D G3DSA:1.20.1580.10 91 493 1.9E-242 T 14-10-2018 XF_2426 90f9a0a748f777c39f3afd0ee5057fdf 965 Gene3D G3DSA:3.40.50.300 617 936 6.1E-138 T 14-10-2018 XF_2426 90f9a0a748f777c39f3afd0ee5057fdf 965 Gene3D G3DSA:1.20.1580.10 692 830 6.1E-138 T 14-10-2018 XF_2426 90f9a0a748f777c39f3afd0ee5057fdf 965 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_2426 90f9a0a748f777c39f3afd0ee5057fdf 965 Gene3D G3DSA:1.10.8.280 288 404 1.9E-242 T 14-10-2018 XF_2426 90f9a0a748f777c39f3afd0ee5057fdf 965 SUPERFAMILY SSF52540 622 908 3.33E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2426 90f9a0a748f777c39f3afd0ee5057fdf 965 Gene3D G3DSA:3.40.50.300 7 596 1.9E-242 T 14-10-2018 XF_2426 90f9a0a748f777c39f3afd0ee5057fdf 965 Pfam PF00005 ABC transporter 624 860 1.2E-9 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_2426 90f9a0a748f777c39f3afd0ee5057fdf 965 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 940 22.439 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 XF_2426 90f9a0a748f777c39f3afd0ee5057fdf 965 Gene3D G3DSA:3.30.190.20 131 240 1.9E-242 T 14-10-2018 XF_0683 cd931689bdee4a24f2907405fd6361cf 726 SUPERFAMILY SSF56672 187 724 9.45E-68 T 14-10-2018 XF_0683 cd931689bdee4a24f2907405fd6361cf 726 SMART SM00482 372 690 4.2E-6 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_0683 cd931689bdee4a24f2907405fd6361cf 726 Gene3D G3DSA:3.30.420.10 6 193 5.6E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XF_0683 cd931689bdee4a24f2907405fd6361cf 726 Pfam PF00476 DNA polymerase family A 267 498 3.1E-10 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_0683 cd931689bdee4a24f2907405fd6361cf 726 SUPERFAMILY SSF53098 27 179 4.74E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily XF_2448 3ad480fba64a77c39c0a5c757bdada7f 430 Pfam PF13416 Bacterial extracellular solute-binding protein 43 352 2.6E-37 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein XF_2448 3ad480fba64a77c39c0a5c757bdada7f 430 Gene3D G3DSA:3.40.190.10 41 368 1.2E-134 T 14-10-2018 XF_2448 3ad480fba64a77c39c0a5c757bdada7f 430 Gene3D G3DSA:3.40.190.10 141 405 1.2E-134 T 14-10-2018 XF_2448 3ad480fba64a77c39c0a5c757bdada7f 430 SUPERFAMILY SSF53850 27 406 2.1E-82 T 14-10-2018 XF_1550 17efc3997c9911ae5cde80afd744e193 967 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 817 957 1.1E-51 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 XF_1550 17efc3997c9911ae5cde80afd744e193 967 Gene3D G3DSA:3.40.50.11610 749 954 8.8E-165 T 14-10-2018 XF_1550 17efc3997c9911ae5cde80afd744e193 967 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 36 74 5.7E-16 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 XF_1550 17efc3997c9911ae5cde80afd744e193 967 PIRSF PIRSF000157 26 959 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 XF_1550 17efc3997c9911ae5cde80afd744e193 967 Gene3D G3DSA:3.40.50.970 187 554 6.3E-146 T 14-10-2018 XF_1550 17efc3997c9911ae5cde80afd744e193 967 Gene3D G3DSA:1.10.287.1150 103 186 1.7E-21 T 14-10-2018 XF_1550 17efc3997c9911ae5cde80afd744e193 967 SMART SM00861 619 812 2.6E-53 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XF_1550 17efc3997c9911ae5cde80afd744e193 967 Pfam PF02779 Transketolase, pyrimidine binding domain 620 813 2.5E-62 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XF_1550 17efc3997c9911ae5cde80afd744e193 967 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 39 957 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 XF_1550 17efc3997c9911ae5cde80afd744e193 967 SUPERFAMILY SSF52518 142 567 2.36E-85 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold XF_1550 17efc3997c9911ae5cde80afd744e193 967 Gene3D G3DSA:3.40.50.12470 582 828 8.8E-165 T 14-10-2018 XF_1550 17efc3997c9911ae5cde80afd744e193 967 SUPERFAMILY SSF52518 602 819 1.96E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold XF_1550 17efc3997c9911ae5cde80afd744e193 967 Pfam PF00676 Dehydrogenase E1 component 234 541 9.1E-52 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 XF_0324 b23c09ee8b4a79f5ab800bb230b6767f 323 Gene3D G3DSA:3.40.190.10 111 316 2.4E-113 T 14-10-2018 XF_0324 b23c09ee8b4a79f5ab800bb230b6767f 323 SUPERFAMILY SSF53850 14 283 2.83E-41 T 14-10-2018 XF_0324 b23c09ee8b4a79f5ab800bb230b6767f 323 Gene3D G3DSA:3.40.190.10 13 303 2.4E-113 T 14-10-2018 XF_0324 b23c09ee8b4a79f5ab800bb230b6767f 323 Pfam PF13531 Bacterial extracellular solute-binding protein 28 271 9.0E-17 T 14-10-2018 XF_1347 9ebb2127152b3d5c7e29aa7ef447026a 348 SMART SM00382 27 214 7.2E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1347 9ebb2127152b3d5c7e29aa7ef447026a 348 SUPERFAMILY SSF52540 3 243 7.72E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1347 9ebb2127152b3d5c7e29aa7ef447026a 348 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 2.4E-111 T 14-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 XF_1347 9ebb2127152b3d5c7e29aa7ef447026a 348 Gene3D G3DSA:3.40.50.300 3 248 2.0E-77 T 14-10-2018 XF_1347 9ebb2127152b3d5c7e29aa7ef447026a 348 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_1347 9ebb2127152b3d5c7e29aa7ef447026a 348 Pfam PF12857 TOBE-like domain 284 337 2.2E-6 T 14-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 XF_1347 9ebb2127152b3d5c7e29aa7ef447026a 348 Pfam PF00005 ABC transporter 19 164 7.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_1347 9ebb2127152b3d5c7e29aa7ef447026a 348 SUPERFAMILY SSF50331 240 340 1.36E-7 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal XF_2235 d738e7ce91aeef319a584fbcb699656d 796 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 708 792 2.2E-15 T 14-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_2235 d738e7ce91aeef319a584fbcb699656d 796 Pfam PF00912 Transglycosylase 73 239 1.2E-44 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_2235 d738e7ce91aeef319a584fbcb699656d 796 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 52 794 4.1E-225 T 14-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_2235 d738e7ce91aeef319a584fbcb699656d 796 Gene3D G3DSA:1.10.3810.10 68 262 8.0E-49 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_2235 d738e7ce91aeef319a584fbcb699656d 796 SUPERFAMILY SSF56601 221 643 1.01E-95 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XF_2235 d738e7ce91aeef319a584fbcb699656d 796 Gene3D G3DSA:3.40.710.10 266 620 1.4E-68 T 14-10-2018 XF_2235 d738e7ce91aeef319a584fbcb699656d 796 SUPERFAMILY SSF53955 52 270 1.6E-61 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_2235 d738e7ce91aeef319a584fbcb699656d 796 Pfam PF00905 Penicillin binding protein transpeptidase domain 316 535 2.8E-13 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XF_0790 ffb33dfb85fab208069e8f068041f912 313 Gene3D G3DSA:1.10.150.170 106 213 7.8E-95 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 XF_0790 ffb33dfb85fab208069e8f068041f912 313 Gene3D G3DSA:3.40.50.150 6 305 7.8E-95 T 14-10-2018 XF_0790 ffb33dfb85fab208069e8f068041f912 313 SUPERFAMILY SSF53335 3 306 1.98E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0790 ffb33dfb85fab208069e8f068041f912 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 305 8.2E-99 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XF_0790 ffb33dfb85fab208069e8f068041f912 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 3 306 36.815 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XF_0790 ffb33dfb85fab208069e8f068041f912 313 Pfam PF01795 MraW methylase family 2 305 1.1E-96 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XF_0790 ffb33dfb85fab208069e8f068041f912 313 PIRSF PIRSF004486 1 307 1.0E-94 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XF_0790 ffb33dfb85fab208069e8f068041f912 313 SUPERFAMILY SSF81799 108 212 4.05E-33 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 XF_0189 8fa1fab34f6a559903690399ddfb81ab 486 Pfam PF00202 Aminotransferase class-III 47 477 6.6E-113 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XF_0189 8fa1fab34f6a559903690399ddfb81ab 486 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 32 479 1.3E-159 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 XF_0189 8fa1fab34f6a559903690399ddfb81ab 486 SUPERFAMILY SSF53383 27 480 5.29E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XF_0189 8fa1fab34f6a559903690399ddfb81ab 486 Gene3D G3DSA:3.90.1150.10 28 469 1.2E-149 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XF_0189 8fa1fab34f6a559903690399ddfb81ab 486 Gene3D G3DSA:3.40.640.10 83 377 1.2E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XF_0189 8fa1fab34f6a559903690399ddfb81ab 486 PIRSF PIRSF000521 48 454 4.0E-24 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 PRINTS PR00625 DnaJ domain signature 25 40 8.6E-29 T 14-10-2018 IPR001623 DnaJ domain XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 PRINTS PR00625 DnaJ domain signature 7 25 8.6E-29 T 14-10-2018 IPR001623 DnaJ domain XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 PRINTS PR00625 DnaJ domain signature 42 62 8.6E-29 T 14-10-2018 IPR001623 DnaJ domain XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 PRINTS PR00625 DnaJ domain signature 62 81 8.6E-29 T 14-10-2018 IPR001623 DnaJ domain XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 SMART SM00271 4 62 7.4E-30 T 14-10-2018 IPR001623 DnaJ domain XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 362 39.183 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 SUPERFAMILY SSF49493 104 246 5.1E-19 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Pfam PF00226 DnaJ domain 5 67 6.1E-26 T 14-10-2018 IPR001623 DnaJ domain XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Gene3D G3DSA:1.10.287.110 1 107 8.3E-33 T 14-10-2018 IPR036869 Chaperone J-domain superfamily XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 337 3.8E-126 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Pfam PF01556 DnaJ C terminal domain 112 322 1.1E-41 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Gene3D G3DSA:2.60.260.20 108 238 2.5E-38 T 14-10-2018 XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 SUPERFAMILY SSF57938 124 199 1.44E-20 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 SUPERFAMILY SSF49493 248 333 3.66E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 SUPERFAMILY SSF46565 1 100 3.66E-33 T 14-10-2018 IPR036869 Chaperone J-domain superfamily XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Gene3D G3DSA:2.10.230.10 137 196 2.5E-38 T 14-10-2018 XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Pfam PF00684 DnaJ central domain 137 196 1.7E-13 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 XF_2339 8b7c14ac90ce09c8bd1d68d6d7fb64ce 368 Gene3D G3DSA:2.60.260.20 243 351 4.6E-28 T 14-10-2018 XF_2157 a24cb164e4e3fe11c742cfd7f3aea3c8 239 SUPERFAMILY SSF53098 4 180 1.1E-50 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily XF_2157 a24cb164e4e3fe11c742cfd7f3aea3c8 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 181 6.7E-60 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_2157 a24cb164e4e3fe11c742cfd7f3aea3c8 239 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 6 237 1.9E-100 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_2157 a24cb164e4e3fe11c742cfd7f3aea3c8 239 SMART SM00479 6 179 3.2E-43 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XF_2157 a24cb164e4e3fe11c742cfd7f3aea3c8 239 Gene3D G3DSA:3.30.420.10 1 183 7.4E-53 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XF_2157 a24cb164e4e3fe11c742cfd7f3aea3c8 239 Pfam PF00929 Exonuclease 8 170 1.4E-32 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XF_1831 ed9829387356fc9ee72481ace53b4c28 283 SUPERFAMILY SSF53328 88 283 2.49E-60 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XF_1831 ed9829387356fc9ee72481ace53b4c28 283 Gene3D G3DSA:3.40.50.170 87 282 4.9E-69 T 14-10-2018 XF_1831 ed9829387356fc9ee72481ace53b4c28 283 Gene3D G3DSA:3.30.70.260 1 85 7.7E-26 T 14-10-2018 XF_1831 ed9829387356fc9ee72481ace53b4c28 283 SUPERFAMILY SSF55021 2 84 2.96E-18 T 14-10-2018 XF_1831 ed9829387356fc9ee72481ace53b4c28 283 PIRSF PIRSF036480 2 283 2.9E-107 T 14-10-2018 XF_1831 ed9829387356fc9ee72481ace53b4c28 283 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 282 1.4E-100 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XF_1831 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 8.8E-52 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XF_1831 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 8.8E-52 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XF_1831 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 8.8E-52 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XF_1831 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 8.8E-52 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XF_1831 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 8.8E-52 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XF_1831 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 8.8E-52 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XF_1831 ed9829387356fc9ee72481ace53b4c28 283 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 282 46.85 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XF_1831 ed9829387356fc9ee72481ace53b4c28 283 Pfam PF00551 Formyl transferase 88 264 5.0E-38 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XF_2352 b945ceae72950a7428f147a765c38fcf 67 PRINTS PR00050 Cold shock protein signature 4 19 9.7E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XF_2352 b945ceae72950a7428f147a765c38fcf 67 PRINTS PR00050 Cold shock protein signature 25 34 9.7E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XF_2352 b945ceae72950a7428f147a765c38fcf 67 PRINTS PR00050 Cold shock protein signature 40 58 9.7E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XF_2352 b945ceae72950a7428f147a765c38fcf 67 SMART SM00357 3 67 1.8E-28 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 XF_2352 b945ceae72950a7428f147a765c38fcf 67 SUPERFAMILY SSF50249 1 66 4.5E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2352 b945ceae72950a7428f147a765c38fcf 67 PIRSF PIRSF002599 1 67 9.0E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 XF_2352 b945ceae72950a7428f147a765c38fcf 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site XF_2352 b945ceae72950a7428f147a765c38fcf 67 Gene3D G3DSA:2.40.50.140 1 65 1.5E-28 T 14-10-2018 XF_2352 b945ceae72950a7428f147a765c38fcf 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 3.4E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 537 555 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site XF_1116 5ead2987bccafe3d7df4a51c19513812 868 PIRSF PIRSF036459 1 868 0.0 T 14-10-2018 IPR011246 Bifunctional diaminopimelate decarboxylase/aspartate kinase XF_1116 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:2.40.37.10 510 867 6.9E-95 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 641 650 1.7E-13 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 772 790 1.7E-13 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 855 868 1.7E-13 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 555 572 1.7E-13 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:3.40.1160.10 12 303 2.8E-70 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XF_1116 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF53633 9 305 2.09E-57 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XF_1116 5ead2987bccafe3d7df4a51c19513812 868 Pfam PF00696 Amino acid kinase family 10 291 1.5E-41 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 ProSitePatterns PS00324 Aspartokinase signature. 12 20 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF55021 313 405 2.59E-11 T 14-10-2018 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 9 460 7.4E-82 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:3.20.20.10 516 758 6.9E-95 T 14-10-2018 IPR029066 PLP-binding barrel XF_1116 5ead2987bccafe3d7df4a51c19513812 868 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 515 845 1.1E-20 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF55021 388 462 2.21E-9 T 14-10-2018 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF51419 510 756 8.58E-56 T 14-10-2018 IPR029066 PLP-binding barrel XF_1116 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:3.30.70.260 317 456 1.4E-34 T 14-10-2018 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF50621 734 866 1.34E-41 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 519 754 6.6E-41 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 509 867 5.3E-90 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 697 713 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site XF_1116 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 744 763 4.9E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 537 555 4.9E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 666 679 4.9E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 845 858 4.9E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 557 569 4.9E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:3.30.70.260 323 395 1.4E-34 T 14-10-2018 XF_1116 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:1.20.120.1320 52 141 2.8E-70 T 14-10-2018 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 SUPERFAMILY SSF51621 17 355 2.37E-87 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 ProSitePatterns PS00110 Pyruvate kinase active site signature. 231 243 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 Pfam PF00224 Pyruvate kinase, barrel domain 19 355 4.8E-115 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 Gene3D G3DSA:3.20.20.60 19 351 2.2E-153 T 14-10-2018 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 Pfam PF02887 Pyruvate kinase, alpha/beta domain 373 486 4.3E-25 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 Gene3D G3DSA:3.40.1380.20 352 485 2.2E-153 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 19 489 3.2E-152 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 Gene3D G3DSA:2.40.33.10 87 185 2.2E-153 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 SUPERFAMILY SSF50800 87 184 1.34E-22 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 SUPERFAMILY SSF52935 339 489 8.9E-37 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 PRINTS PR01050 Pyruvate kinase family signature 76 92 6.2E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 PRINTS PR01050 Pyruvate kinase family signature 310 328 6.2E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 PRINTS PR01050 Pyruvate kinase family signature 233 259 6.2E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 PRINTS PR01050 Pyruvate kinase family signature 260 284 6.2E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 PRINTS PR01050 Pyruvate kinase family signature 285 309 6.2E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 PRINTS PR01050 Pyruvate kinase family signature 329 345 6.2E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XF_0824 2ae6d91d142623a7bea1297d07dfa804 501 PRINTS PR01050 Pyruvate kinase family signature 203 217 6.2E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XF_1362 53602859e21a08bc160506398a6ac01c 416 Gene3D G3DSA:3.30.460.10 1 122 2.9E-30 T 14-10-2018 XF_1362 53602859e21a08bc160506398a6ac01c 416 SUPERFAMILY SSF81891 121 404 6.54E-53 T 14-10-2018 XF_1362 53602859e21a08bc160506398a6ac01c 416 Pfam PF01966 HD domain 238 348 1.6E-4 T 14-10-2018 IPR006674 HD domain XF_1362 53602859e21a08bc160506398a6ac01c 416 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 409 48.811 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 XF_1362 53602859e21a08bc160506398a6ac01c 416 SUPERFAMILY SSF81301 2 120 1.42E-29 T 14-10-2018 XF_1362 53602859e21a08bc160506398a6ac01c 416 Gene3D G3DSA:1.10.3090.10 123 407 7.1E-43 T 14-10-2018 XF_1362 53602859e21a08bc160506398a6ac01c 416 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 213 6.0E-12 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XF_1362 53602859e21a08bc160506398a6ac01c 416 Pfam PF01743 Poly A polymerase head domain 4 123 1.2E-20 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XF_1362 53602859e21a08bc160506398a6ac01c 416 PIRSF PIRSF000813 1 408 6.5E-181 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 XF_1799 ebb42432665dd3ddc30b612a93239901 305 Gene3D G3DSA:3.40.50.10090 90 216 1.3E-38 T 14-10-2018 XF_1799 ebb42432665dd3ddc30b612a93239901 305 SUPERFAMILY SSF69618 59 295 6.67E-42 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_1799 ebb42432665dd3ddc30b612a93239901 305 Pfam PF02602 Uroporphyrinogen-III synthase HemD 73 265 3.6E-21 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_1799 ebb42432665dd3ddc30b612a93239901 305 Gene3D G3DSA:3.40.50.10090 62 291 1.3E-38 T 14-10-2018 XF_0599 e2cebb53079f2d4885fd51d94565e957 776 Pfam PF00593 TonB dependent receptor 289 774 7.0E-50 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XF_0599 e2cebb53079f2d4885fd51d94565e957 776 Gene3D G3DSA:2.170.130.10 70 197 1.0E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XF_0599 e2cebb53079f2d4885fd51d94565e957 776 SUPERFAMILY SSF56935 50 775 6.54E-113 T 14-10-2018 XF_0599 e2cebb53079f2d4885fd51d94565e957 776 Gene3D G3DSA:2.40.170.20 202 776 2.7E-111 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XF_0599 e2cebb53079f2d4885fd51d94565e957 776 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 89 775 4.7E-70 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 XF_0599 e2cebb53079f2d4885fd51d94565e957 776 Pfam PF07715 TonB-dependent Receptor Plug Domain 88 188 1.2E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain XF_2343 a5e213058d3e92907cb5e21a6f37f269 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 507 1.9E-21 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal XF_2343 a5e213058d3e92907cb5e21a6f37f269 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 2.7E-148 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 XF_2343 a5e213058d3e92907cb5e21a6f37f269 557 Gene3D G3DSA:3.40.50.300 323 553 2.7E-43 T 14-10-2018 XF_2343 a5e213058d3e92907cb5e21a6f37f269 557 SUPERFAMILY SSF52540 1 507 7.02E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2343 a5e213058d3e92907cb5e21a6f37f269 557 PIRSF PIRSF003128 1 557 8.8E-149 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 XF_2343 a5e213058d3e92907cb5e21a6f37f269 557 Gene3D G3DSA:3.40.50.300 1 265 3.0E-46 T 14-10-2018 XF_1924 793e41d64db04ad8ee90cf7e1a5c96d8 512 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 13 480 7.6E-137 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 XF_1924 793e41d64db04ad8ee90cf7e1a5c96d8 512 Gene3D G3DSA:3.90.700.10 237 344 1.3E-127 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1924 793e41d64db04ad8ee90cf7e1a5c96d8 512 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 341 363 6.2E-6 T 14-10-2018 XF_1924 793e41d64db04ad8ee90cf7e1a5c96d8 512 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 6.2E-6 T 14-10-2018 XF_1924 793e41d64db04ad8ee90cf7e1a5c96d8 512 Pfam PF02910 Fumarate reductase flavoprotein C-term 455 493 3.2E-6 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1924 793e41d64db04ad8ee90cf7e1a5c96d8 512 Gene3D G3DSA:3.50.50.60 13 390 1.3E-127 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1924 793e41d64db04ad8ee90cf7e1a5c96d8 512 Gene3D G3DSA:1.20.58.100 405 497 2.9E-12 T 14-10-2018 XF_1924 793e41d64db04ad8ee90cf7e1a5c96d8 512 Pfam PF00890 FAD binding domain 13 378 1.7E-77 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1924 793e41d64db04ad8ee90cf7e1a5c96d8 512 SUPERFAMILY SSF56425 227 338 4.19E-35 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1924 793e41d64db04ad8ee90cf7e1a5c96d8 512 SUPERFAMILY SSF51905 13 405 3.62E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1924 793e41d64db04ad8ee90cf7e1a5c96d8 512 SUPERFAMILY SSF46977 416 493 1.31E-13 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 7.2E-7 T 14-10-2018 IPR024973 ESPR domain XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 717 748 1.0 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 979 1017 1.1E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 321 353 1.4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 528 558 0.0077 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 353 392 5.5E-7 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 464 499 0.07 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 856 888 0.33 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 507 539 0.0082 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1300 1338 0.07 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 378 414 0.0073 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 959 989 0.0038 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 734 768 0.003 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 880 915 1.3E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 568 599 5.1E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1222 1256 2.1 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1260 1298 0.0057 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1182 1214 2.6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 333 373 1.9E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 757 789 0.0012 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 918 956 3.5E-9 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1063 1100 2.1E-7 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1122 1162 4.2E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 669 705 1.9E-6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1453 1478 1.3 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 775 811 0.005 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 812 852 5.5E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05594 Haemagluttinin repeat 948 1009 0.0036 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05594 Haemagluttinin repeat 1054 1108 0.049 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05594 Haemagluttinin repeat 317 363 0.013 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05594 Haemagluttinin repeat 1208 1280 0.052 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05594 Haemagluttinin repeat 672 735 0.56 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05594 Haemagluttinin repeat 1114 1202 0.3 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05594 Haemagluttinin repeat 512 564 15.0 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05594 Haemagluttinin repeat 1287 1360 49.0 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05594 Haemagluttinin repeat 879 944 0.0016 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05594 Haemagluttinin repeat 575 636 0.0022 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05594 Haemagluttinin repeat 365 399 31.0 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05594 Haemagluttinin repeat 773 831 6.7E-5 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05594 Haemagluttinin repeat 2063 2135 0.0068 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Gene3D G3DSA:2.160.20.10 74 396 2.3E-99 T 14-10-2018 IPR012334 Pectin lyase fold XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF13332 Haemagluttinin repeat 2300 2452 1.9E-6 T 14-10-2018 IPR025157 Hemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF13332 Haemagluttinin repeat 2526 2695 1.1E-40 T 14-10-2018 IPR025157 Hemagglutinin repeat XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 3226 3400 9.2E-17 T 14-10-2018 IPR008487 Protein of unknown function DUF769 XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 Pfam PF05860 haemagglutination activity domain 74 205 3.7E-33 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 106 202 1.6E-25 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 SUPERFAMILY SSF51126 76 361 1.91E-60 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor XF_2196 86692d2094fd6eb7f83ce5952fd96465 3442 SMART SM00912 87 207 1.0E-47 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XF_1000 f6d1cd6fe57fff8ef754a86fec11ab45 364 Pfam PF01546 Peptidase family M20/M25/M40 67 362 9.1E-21 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 XF_1000 f6d1cd6fe57fff8ef754a86fec11ab45 364 SUPERFAMILY SSF53187 3 362 5.09E-35 T 14-10-2018 XF_1000 f6d1cd6fe57fff8ef754a86fec11ab45 364 SUPERFAMILY SSF55031 165 265 3.49E-13 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain XF_1000 f6d1cd6fe57fff8ef754a86fec11ab45 364 Pfam PF07687 Peptidase dimerisation domain 163 265 5.5E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain XF_1000 f6d1cd6fe57fff8ef754a86fec11ab45 364 Gene3D G3DSA:3.30.70.360 166 279 2.2E-106 T 14-10-2018 XF_1000 f6d1cd6fe57fff8ef754a86fec11ab45 364 Gene3D G3DSA:3.40.630.10 15 350 2.2E-106 T 14-10-2018 XF_1983 5c2e2e9e898cedaed00215238e01055b 206 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 15 198 38.868 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XF_1983 5c2e2e9e898cedaed00215238e01055b 206 Pfam PF01227 GTP cyclohydrolase I 20 197 1.3E-73 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XF_1983 5c2e2e9e898cedaed00215238e01055b 206 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 77 93 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XF_1983 5c2e2e9e898cedaed00215238e01055b 206 Gene3D G3DSA:1.10.286.10 4 63 5.5E-21 T 14-10-2018 XF_1983 5c2e2e9e898cedaed00215238e01055b 206 SUPERFAMILY SSF55620 7 198 6.6E-76 T 14-10-2018 XF_1983 5c2e2e9e898cedaed00215238e01055b 206 Gene3D G3DSA:3.30.1130.10 67 200 2.8E-52 T 14-10-2018 XF_1983 5c2e2e9e898cedaed00215238e01055b 206 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 125 135 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XF_1983 5c2e2e9e898cedaed00215238e01055b 206 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 20 197 3.4E-65 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 431 445 1.6E-70 T 14-10-2018 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 46 61 1.6E-70 T 14-10-2018 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 279 292 1.6E-70 T 14-10-2018 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 498 514 1.6E-70 T 14-10-2018 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 81 94 1.6E-70 T 14-10-2018 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 536 548 1.6E-70 T 14-10-2018 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 516 533 1.6E-70 T 14-10-2018 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 124 138 1.6E-70 T 14-10-2018 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 746 762 1.6E-70 T 14-10-2018 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Pfam PF00204 DNA gyrase B 232 401 5.3E-57 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 SMART SM00387 42 186 4.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 184 1.5E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Gene3D G3DSA:3.40.50.670 409 578 5.0E-71 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 SUPERFAMILY SSF55874 16 221 1.24E-68 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Pfam PF01751 Toprim domain 430 539 5.9E-18 T 14-10-2018 IPR006171 TOPRIM domain XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 SMART SM00433 46 807 1.2E-253 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 SUPERFAMILY SSF54211 232 402 2.66E-54 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 191 206 2.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 16 26 2.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 231 253 2.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 371 385 2.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 323 339 2.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 206 219 2.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 385 405 2.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 767 779 2.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 481 490 2.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 783 799 2.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Gene3D G3DSA:3.30.230.10 232 403 2.1E-69 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 16 814 95.08 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 ProSitePatterns PS00177 DNA topoisomerase II signature. 433 441 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 16 814 5.3E-292 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 SUPERFAMILY SSF56719 405 806 4.18E-83 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Gene3D G3DSA:3.40.50.670 694 812 8.0E-24 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Gene3D G3DSA:3.30.565.10 14 231 6.0E-87 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0005 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 742 803 3.6E-28 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 XF_1125 ec619ab104b0c57342af84a1426a4d27 497 Pfam PF10150 Ribonuclease E/G family 130 401 1.5E-98 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 XF_1125 ec619ab104b0c57342af84a1426a4d27 497 Pfam PF00575 S1 RNA binding domain 38 125 3.5E-5 T 14-10-2018 IPR003029 S1 domain GO:0003676 XF_1125 ec619ab104b0c57342af84a1426a4d27 497 SUPERFAMILY SSF50249 39 134 2.29E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1125 ec619ab104b0c57342af84a1426a4d27 497 Gene3D G3DSA:2.40.50.140 33 133 4.5E-30 T 14-10-2018 XF_1125 ec619ab104b0c57342af84a1426a4d27 497 SMART SM00316 37 128 3.3E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 XF_1125 ec619ab104b0c57342af84a1426a4d27 497 Gene3D G3DSA:3.40.1260.20 410 497 2.9E-6 T 14-10-2018 XF_1125 ec619ab104b0c57342af84a1426a4d27 497 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 434 9.2E-150 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 XF_1535 f8a3083b265021704708f23ad2d82ae1 429 Gene3D G3DSA:1.10.230.10 269 379 1.2E-143 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain XF_1535 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 362 378 4.2E-53 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 XF_1535 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 382 396 4.2E-53 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 XF_1535 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 166 179 4.2E-53 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 XF_1535 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 299 319 4.2E-53 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 XF_1535 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 220 235 4.2E-53 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 XF_1535 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 242 270 4.2E-53 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 XF_1535 f8a3083b265021704708f23ad2d82ae1 429 ProSitePatterns PS00480 Citrate synthase signature. 306 318 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 XF_1535 f8a3083b265021704708f23ad2d82ae1 429 Gene3D G3DSA:1.10.580.10 58 414 1.2E-143 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 XF_1535 f8a3083b265021704708f23ad2d82ae1 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 425 4.7E-201 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 XF_1535 f8a3083b265021704708f23ad2d82ae1 429 Gene3D G3DSA:2.20.28.60 5 51 1.4E-14 T 14-10-2018 XF_1535 f8a3083b265021704708f23ad2d82ae1 429 SUPERFAMILY SSF48256 9 427 1.96E-160 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 XF_1535 f8a3083b265021704708f23ad2d82ae1 429 Pfam PF00285 Citrate synthase, C-terminal domain 47 414 5.2E-134 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 XF_1535 f8a3083b265021704708f23ad2d82ae1 429 PIRSF PIRSF001369 38 429 2.5E-159 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type XF_1426 6c2f346865a85761622228396a72242c 297 Pfam PF00520 Ion transport protein 34 239 5.0E-30 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 XF_1426 6c2f346865a85761622228396a72242c 297 Gene3D G3DSA:1.10.287.70 34 246 2.2E-53 T 14-10-2018 XF_1426 6c2f346865a85761622228396a72242c 297 SUPERFAMILY SSF81324 30 244 4.28E-53 T 14-10-2018 XF_1426 6c2f346865a85761622228396a72242c 297 PRINTS PR00169 Potassium channel signature 95 115 3.6E-28 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XF_1426 6c2f346865a85761622228396a72242c 297 PRINTS PR00169 Potassium channel signature 27 55 3.6E-28 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XF_1426 6c2f346865a85761622228396a72242c 297 PRINTS PR00169 Potassium channel signature 160 183 3.6E-28 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XF_1426 6c2f346865a85761622228396a72242c 297 PRINTS PR00169 Potassium channel signature 189 211 3.6E-28 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XF_1426 6c2f346865a85761622228396a72242c 297 PRINTS PR00169 Potassium channel signature 218 244 3.6E-28 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XF_1426 6c2f346865a85761622228396a72242c 297 PRINTS PR00169 Potassium channel signature 131 157 3.6E-28 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XF_1426 6c2f346865a85761622228396a72242c 297 PRINTS PR00169 Potassium channel signature 69 92 3.6E-28 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XF_2446 aa19ef11e60898a15d5d50f9ed246d2d 278 Gene3D G3DSA:1.10.3720.10 4 269 2.2E-66 T 14-10-2018 IPR035906 MetI-like superfamily XF_2446 aa19ef11e60898a15d5d50f9ed246d2d 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 267 6.7E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XF_2446 aa19ef11e60898a15d5d50f9ed246d2d 278 SUPERFAMILY SSF161098 8 278 4.8E-72 T 14-10-2018 IPR035906 MetI-like superfamily XF_1369 19fea084106aaf067b4f386f2859f24f 374 Pfam PF01264 Chorismate synthase 13 347 2.7E-130 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XF_1369 19fea084106aaf067b4f386f2859f24f 374 ProSitePatterns PS00788 Chorismate synthase signature 2. 126 142 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XF_1369 19fea084106aaf067b4f386f2859f24f 374 SUPERFAMILY SSF103263 6 353 1.24E-140 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XF_1369 19fea084106aaf067b4f386f2859f24f 374 ProSitePatterns PS00789 Chorismate synthase signature 3. 321 337 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XF_1369 19fea084106aaf067b4f386f2859f24f 374 PIRSF PIRSF001456 5 363 7.0E-131 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XF_1369 19fea084106aaf067b4f386f2859f24f 374 ProSitePatterns PS00787 Chorismate synthase signature 1. 18 33 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XF_1369 19fea084106aaf067b4f386f2859f24f 374 TIGRFAM TIGR00033 aroC: chorismate synthase 13 352 2.5E-134 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XF_1369 19fea084106aaf067b4f386f2859f24f 374 Gene3D G3DSA:3.60.150.10 3 364 2.6E-145 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XF_1369 19fea084106aaf067b4f386f2859f24f 374 Hamap MF_00300 Chorismate synthase [aroC]. 12 356 35.248 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XF_0036 f44f49b6a0dbe52e6c710223152a5f44 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 XF_0036 f44f49b6a0dbe52e6c710223152a5f44 400 Gene3D G3DSA:3.90.1150.10 7 394 2.8E-149 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XF_0036 f44f49b6a0dbe52e6c710223152a5f44 400 Pfam PF00155 Aminotransferase class I and II 28 394 2.1E-75 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XF_0036 f44f49b6a0dbe52e6c710223152a5f44 400 SUPERFAMILY SSF53383 3 397 5.69E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XF_0036 f44f49b6a0dbe52e6c710223152a5f44 400 PRINTS PR00799 Aspartate aminotransferase signature 208 220 1.2E-33 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XF_0036 f44f49b6a0dbe52e6c710223152a5f44 400 PRINTS PR00799 Aspartate aminotransferase signature 276 301 1.2E-33 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XF_0036 f44f49b6a0dbe52e6c710223152a5f44 400 PRINTS PR00799 Aspartate aminotransferase signature 343 361 1.2E-33 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XF_0036 f44f49b6a0dbe52e6c710223152a5f44 400 PRINTS PR00799 Aspartate aminotransferase signature 177 196 1.2E-33 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XF_0036 f44f49b6a0dbe52e6c710223152a5f44 400 Gene3D G3DSA:3.40.640.10 62 303 2.8E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XF_2326 e070ea90620b441d179c2a768d564812 362 PIRSF PIRSF000525 1 362 1.5E-144 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 XF_2326 e070ea90620b441d179c2a768d564812 362 SUPERFAMILY SSF53383 3 360 2.81E-106 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XF_2326 e070ea90620b441d179c2a768d564812 362 Gene3D G3DSA:3.90.1150.10 258 362 8.8E-38 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XF_2326 e070ea90620b441d179c2a768d564812 362 Pfam PF00266 Aminotransferase class-V 5 350 1.1E-50 T 14-10-2018 IPR000192 Aminotransferase class V domain XF_2326 e070ea90620b441d179c2a768d564812 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 3 361 46.744 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 XF_2326 e070ea90620b441d179c2a768d564812 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 361 7.1E-156 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 XF_2326 e070ea90620b441d179c2a768d564812 362 Gene3D G3DSA:3.40.640.10 18 256 1.1E-80 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 Gene3D G3DSA:3.90.960.10 258 404 8.8E-223 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 SUPERFAMILY SSF52954 478 580 3.6E-23 T 14-10-2018 XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 Hamap MF_01569 Proline--tRNA ligase [proS]. 19 581 38.938 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 SUPERFAMILY SSF55681 28 492 9.44E-102 T 14-10-2018 XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 Gene3D G3DSA:3.40.50.800 22 566 8.8E-223 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 PRINTS PR01046 Prolyl-tRNA synthetase signature 122 133 7.7E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 PRINTS PR01046 Prolyl-tRNA synthetase signature 86 104 7.7E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 PRINTS PR01046 Prolyl-tRNA synthetase signature 162 173 7.7E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 PRINTS PR01046 Prolyl-tRNA synthetase signature 152 160 7.7E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 113 473 2.2E-45 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 SUPERFAMILY SSF55826 236 404 4.06E-29 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 Gene3D G3DSA:3.30.930.10 29 479 8.8E-223 T 14-10-2018 XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 Pfam PF03129 Anticodon binding domain 489 579 2.6E-12 T 14-10-2018 IPR004154 Anticodon-binding XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 19 577 1.1E-209 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 XF_0445 722f3bf4a28c24aaf29348e976ff4c16 582 Pfam PF04073 Aminoacyl-tRNA editing domain 274 393 1.3E-24 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 XF_2449 ed4cee6c1bdf684707b70fdd5a797f31 544 Gene3D G3DSA:1.50.10.140 63 503 2.3E-158 T 14-10-2018 XF_2449 ed4cee6c1bdf684707b70fdd5a797f31 544 Pfam PF10091 Putative glucoamylase 236 482 2.4E-86 T 14-10-2018 IPR019282 Domain of unknown function DUF2329 XF_2449 ed4cee6c1bdf684707b70fdd5a797f31 544 PIRSF PIRSF028431 23 509 2.7E-195 T 14-10-2018 IPR016883 Uncharacterised conserved protein UCP028431 XF_0050 7ca3cfb37b76044d01fb9e2647e32261 728 Gene3D G3DSA:3.40.50.300 282 642 1.7E-121 T 14-10-2018 XF_0050 7ca3cfb37b76044d01fb9e2647e32261 728 SUPERFAMILY SSF52540 7 648 3.24E-173 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0050 7ca3cfb37b76044d01fb9e2647e32261 728 Gene3D G3DSA:1.10.486.10 383 544 1.7E-121 T 14-10-2018 XF_0050 7ca3cfb37b76044d01fb9e2647e32261 728 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 6.4E-65 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 XF_0050 7ca3cfb37b76044d01fb9e2647e32261 728 Pfam PF13361 UvrD-like helicase C-terminal domain 278 622 2.5E-75 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XF_0050 7ca3cfb37b76044d01fb9e2647e32261 728 Gene3D G3DSA:1.10.10.160 114 188 8.1E-92 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily XF_0050 7ca3cfb37b76044d01fb9e2647e32261 728 Gene3D G3DSA:3.40.50.300 10 274 8.1E-92 T 14-10-2018 XF_0050 7ca3cfb37b76044d01fb9e2647e32261 728 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 726 0.0 T 14-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 XF_0111 fa907bb1c202b140dc350b62c85737cf 259 Pfam PF00557 Metallopeptidase family M24 13 243 1.9E-54 T 14-10-2018 IPR000994 Peptidase M24 XF_0111 fa907bb1c202b140dc350b62c85737cf 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 3.2E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XF_0111 fa907bb1c202b140dc350b62c85737cf 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 3.2E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XF_0111 fa907bb1c202b140dc350b62c85737cf 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 3.2E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XF_0111 fa907bb1c202b140dc350b62c85737cf 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 3.2E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XF_0111 fa907bb1c202b140dc350b62c85737cf 259 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XF_0111 fa907bb1c202b140dc350b62c85737cf 259 SUPERFAMILY SSF55920 6 256 6.28E-94 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like XF_0111 fa907bb1c202b140dc350b62c85737cf 259 Gene3D G3DSA:3.90.230.10 2 257 2.6E-112 T 14-10-2018 XF_0111 fa907bb1c202b140dc350b62c85737cf 259 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 5 251 1.2E-99 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XF_0111 fa907bb1c202b140dc350b62c85737cf 259 Hamap MF_01974 Methionine aminopeptidase [map]. 4 252 42.704 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XF_0221 67d1a18e08d56aa3c7cc8ea543abdfb0 613 Pfam PF05960 Bacterial protein of unknown function (DUF885) 67 598 1.4E-159 T 14-10-2018 IPR010281 Protein of unknown function DUF885 XF_2704 b1c338826d91e708d04dde6dff6e5406 508 SMART SM00245 205 397 4.3E-64 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XF_2704 b1c338826d91e708d04dde6dff6e5406 508 Gene3D G3DSA:2.30.42.10 134 219 2.7E-89 T 14-10-2018 XF_2704 b1c338826d91e708d04dde6dff6e5406 508 SUPERFAMILY SSF50156 133 215 2.71E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 XF_2704 b1c338826d91e708d04dde6dff6e5406 508 Pfam PF03572 Peptidase family S41 231 394 4.9E-51 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XF_2704 b1c338826d91e708d04dde6dff6e5406 508 SMART SM00228 134 203 4.4E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 XF_2704 b1c338826d91e708d04dde6dff6e5406 508 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 87 397 6.7E-92 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 XF_2704 b1c338826d91e708d04dde6dff6e5406 508 Gene3D G3DSA:3.30.750.44 82 372 2.7E-89 T 14-10-2018 XF_2704 b1c338826d91e708d04dde6dff6e5406 508 Pfam PF13180 PDZ domain 135 211 4.9E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 XF_2704 b1c338826d91e708d04dde6dff6e5406 508 Gene3D G3DSA:3.90.226.10 220 394 2.7E-89 T 14-10-2018 XF_2704 b1c338826d91e708d04dde6dff6e5406 508 SUPERFAMILY SSF52096 69 399 5.14E-72 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XF_1904 c5d4a74dbcee7ede203b306bb82b4b42 194 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 193 8.3E-49 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 XF_1904 c5d4a74dbcee7ede203b306bb82b4b42 194 SUPERFAMILY SSF50249 1 63 1.43E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1904 c5d4a74dbcee7ede203b306bb82b4b42 194 Gene3D G3DSA:1.10.8.10 147 193 6.8E-9 T 14-10-2018 XF_1904 c5d4a74dbcee7ede203b306bb82b4b42 194 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 193 30.781 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 XF_1904 c5d4a74dbcee7ede203b306bb82b4b42 194 SUPERFAMILY SSF46929 148 191 2.22E-7 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily XF_1904 c5d4a74dbcee7ede203b306bb82b4b42 194 Gene3D G3DSA:1.10.150.20 67 141 1.7E-24 T 14-10-2018 XF_1904 c5d4a74dbcee7ede203b306bb82b4b42 194 Pfam PF07499 RuvA, C-terminal domain 150 191 4.3E-7 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 XF_1904 c5d4a74dbcee7ede203b306bb82b4b42 194 SUPERFAMILY SSF47781 67 136 2.0E-20 T 14-10-2018 IPR010994 RuvA domain 2-like XF_1904 c5d4a74dbcee7ede203b306bb82b4b42 194 Pfam PF01330 RuvA N terminal domain 1 62 4.4E-18 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 XF_1904 c5d4a74dbcee7ede203b306bb82b4b42 194 SMART SM00278 73 92 19.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XF_1904 c5d4a74dbcee7ede203b306bb82b4b42 194 SMART SM00278 108 127 0.31 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XF_1904 c5d4a74dbcee7ede203b306bb82b4b42 194 Pfam PF14520 Helix-hairpin-helix domain 72 130 5.8E-17 T 14-10-2018 XF_1904 c5d4a74dbcee7ede203b306bb82b4b42 194 Gene3D G3DSA:2.40.50.140 1 66 6.9E-23 T 14-10-2018 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 526 552 4.9E-56 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 94 119 4.9E-56 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 79 92 4.9E-56 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 53 75 4.9E-56 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 313 336 4.9E-56 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 Gene3D G3DSA:1.10.520.10 47 476 3.6E-225 T 14-10-2018 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 SUPERFAMILY SSF48113 476 780 1.77E-108 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 Gene3D G3DSA:1.10.520.10 479 780 3.5E-145 T 14-10-2018 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 PRINTS PR00458 Haem peroxidase superfamily signature 117 131 7.6E-13 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 PRINTS PR00458 Haem peroxidase superfamily signature 195 207 7.6E-13 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 PRINTS PR00458 Haem peroxidase superfamily signature 177 194 7.6E-13 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 PRINTS PR00458 Haem peroxidase superfamily signature 364 379 7.6E-13 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 Pfam PF00141 Peroxidase 104 440 2.0E-48 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 Pfam PF00141 Peroxidase 450 754 2.3E-34 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 305 315 - T 14-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 SUPERFAMILY SSF48113 47 474 1.41E-151 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 Hamap MF_01961 Catalase-peroxidase [katG]. 36 781 41.765 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 ProSitePatterns PS00436 Peroxidases active site signature. 117 128 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 40 781 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 Gene3D G3DSA:1.10.420.20 218 443 3.6E-225 T 14-10-2018 XF_2232 8ffd4ef46c9518e1142faa56305cb8c6 781 Gene3D G3DSA:1.10.420.10 633 756 3.5E-145 T 14-10-2018 XF_0307 c544a1dc9c96d37bac964f15cc18c4c8 250 Gene3D G3DSA:3.30.460.80 1 77 8.0E-7 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0307 c544a1dc9c96d37bac964f15cc18c4c8 250 Gene3D G3DSA:3.30.460.80 100 179 8.5E-28 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0307 c544a1dc9c96d37bac964f15cc18c4c8 250 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 160 181 - T 14-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0307 c544a1dc9c96d37bac964f15cc18c4c8 250 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 12 207 32.665 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0307 c544a1dc9c96d37bac964f15cc18c4c8 250 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 200 2.4E-40 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0307 c544a1dc9c96d37bac964f15cc18c4c8 250 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 132 187 2.0E-26 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0307 c544a1dc9c96d37bac964f15cc18c4c8 250 SUPERFAMILY SSF143243 8 219 1.7E-52 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0122 2cb6dd9cb55c455bda7940b81fe663a1 223 SUPERFAMILY SSF46785 13 81 2.03E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_0122 2cb6dd9cb55c455bda7940b81fe663a1 223 Hamap MF_00015 LexA repressor [lexA]. 14 222 30.083 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 XF_0122 2cb6dd9cb55c455bda7940b81fe663a1 223 Gene3D G3DSA:1.10.10.10 12 80 1.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_0122 2cb6dd9cb55c455bda7940b81fe663a1 223 Pfam PF00717 Peptidase S24-like 138 203 1.6E-14 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XF_0122 2cb6dd9cb55c455bda7940b81fe663a1 223 Gene3D G3DSA:2.10.109.10 104 222 5.0E-35 T 14-10-2018 XF_0122 2cb6dd9cb55c455bda7940b81fe663a1 223 SUPERFAMILY SSF51306 98 220 9.77E-33 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XF_0122 2cb6dd9cb55c455bda7940b81fe663a1 223 Pfam PF01726 LexA DNA binding domain 14 76 1.4E-16 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 XF_0122 2cb6dd9cb55c455bda7940b81fe663a1 223 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 174 186 4.2E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 XF_0122 2cb6dd9cb55c455bda7940b81fe663a1 223 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 135 145 4.2E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 XF_0122 2cb6dd9cb55c455bda7940b81fe663a1 223 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 146 157 4.2E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 XF_0122 2cb6dd9cb55c455bda7940b81fe663a1 223 TIGRFAM TIGR00498 lexA: repressor LexA 14 221 8.8E-54 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 XF_2364 e7c13c55ae141ac81a577a000990480d 380 SUPERFAMILY SSF53756 2 370 1.15E-58 T 14-10-2018 XF_2364 e7c13c55ae141ac81a577a000990480d 380 Gene3D G3DSA:3.40.50.2000 189 338 2.0E-24 T 14-10-2018 XF_2364 e7c13c55ae141ac81a577a000990480d 380 Pfam PF00534 Glycosyl transferases group 1 188 328 4.2E-21 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 XF_2364 e7c13c55ae141ac81a577a000990480d 380 Gene3D G3DSA:3.40.50.2000 1 188 5.6E-26 T 14-10-2018 XF_2364 e7c13c55ae141ac81a577a000990480d 380 Pfam PF13439 Glycosyltransferase Family 4 14 179 2.4E-18 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XF_0952 91baebf0043e0100deb831224dd88df0 200 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 7.5E-57 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XF_0952 91baebf0043e0100deb831224dd88df0 200 Gene3D G3DSA:2.40.30.20 1 89 2.3E-24 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XF_0952 91baebf0043e0100deb831224dd88df0 200 SUPERFAMILY SSF63380 1 88 2.04E-22 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XF_0952 91baebf0043e0100deb831224dd88df0 200 PIRSF PIRSF000498 1 200 4.0E-73 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XF_0952 91baebf0043e0100deb831224dd88df0 200 Pfam PF00677 Lumazine binding domain 100 184 1.6E-23 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XF_0952 91baebf0043e0100deb831224dd88df0 200 Pfam PF00677 Lumazine binding domain 3 87 1.1E-18 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XF_0952 91baebf0043e0100deb831224dd88df0 200 SUPERFAMILY SSF63380 93 194 3.06E-31 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XF_0952 91baebf0043e0100deb831224dd88df0 200 Gene3D G3DSA:2.40.30.20 102 200 4.6E-33 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XF_0418 d046821d17a4b58bccd4e5474e3d6d31 218 Gene3D G3DSA:3.10.450.710 34 210 4.7E-41 T 14-10-2018 XF_0418 d046821d17a4b58bccd4e5474e3d6d31 218 PIRSF PIRSF004649 9 218 2.0E-55 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC XF_0418 d046821d17a4b58bccd4e5474e3d6d31 218 Pfam PF05494 MlaC protein 45 206 4.0E-43 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC XF_0660 fd62984ef24fa4b8a2d3e415a28da91c 88 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 15.424 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XF_0660 fd62984ef24fa4b8a2d3e415a28da91c 88 Pfam PF02609 Exonuclease VII small subunit 15 65 1.6E-18 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XF_0660 fd62984ef24fa4b8a2d3e415a28da91c 88 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 15 67 1.4E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XF_0660 fd62984ef24fa4b8a2d3e415a28da91c 88 SUPERFAMILY SSF116842 14 71 6.93E-18 T 14-10-2018 XF_0660 fd62984ef24fa4b8a2d3e415a28da91c 88 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 26 53 5.0E-10 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XF_0660 fd62984ef24fa4b8a2d3e415a28da91c 88 Gene3D G3DSA:1.10.287.1040 10 85 1.0E-22 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 XF_0557 1c3b9da9e80134c1de638f2dfc827c97 151 SUPERFAMILY SSF49503 24 147 1.69E-41 T 14-10-2018 IPR008972 Cupredoxin XF_0557 1c3b9da9e80134c1de638f2dfc827c97 151 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 150 5.0E-69 T 14-10-2018 XF_0557 1c3b9da9e80134c1de638f2dfc827c97 151 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 24 148 8.9E-21 T 14-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 XF_0557 1c3b9da9e80134c1de638f2dfc827c97 151 TIGRFAM TIGR02695 azurin: azurin 25 148 4.4E-56 T 14-10-2018 IPR014068 Azurin XF_0557 1c3b9da9e80134c1de638f2dfc827c97 151 Gene3D G3DSA:2.60.40.420 23 149 7.3E-42 T 14-10-2018 IPR008972 Cupredoxin XF_2465 bb7973881d5fdb433f8f9f1af1038e02 370 Pfam PF00561 alpha/beta hydrolase fold 45 354 1.7E-27 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XF_2465 bb7973881d5fdb433f8f9f1af1038e02 370 PIRSF PIRSF000443 1 370 5.8E-130 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 XF_2465 bb7973881d5fdb433f8f9f1af1038e02 370 SUPERFAMILY SSF53474 14 369 2.06E-86 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_2465 bb7973881d5fdb433f8f9f1af1038e02 370 Gene3D G3DSA:1.10.1740.110 179 285 4.8E-124 T 14-10-2018 XF_2465 bb7973881d5fdb433f8f9f1af1038e02 370 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 16 367 7.1E-109 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 XF_2465 bb7973881d5fdb433f8f9f1af1038e02 370 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 11 368 28.908 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 XF_2465 bb7973881d5fdb433f8f9f1af1038e02 370 Gene3D G3DSA:3.40.50.1820 21 362 4.8E-124 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0944 1fc7671d1a4c245d623712aa5d26837d 554 SUPERFAMILY SSF52540 302 523 6.69E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0944 1fc7671d1a4c245d623712aa5d26837d 554 SUPERFAMILY SSF52540 10 244 8.67E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0944 1fc7671d1a4c245d623712aa5d26837d 554 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_0944 1fc7671d1a4c245d623712aa5d26837d 554 Pfam PF12848 ABC transporter 231 307 2.2E-11 T 14-10-2018 IPR032781 ABC-transporter extension domain XF_0944 1fc7671d1a4c245d623712aa5d26837d 554 Gene3D G3DSA:3.40.50.300 2 286 1.4E-82 T 14-10-2018 XF_0944 1fc7671d1a4c245d623712aa5d26837d 554 Pfam PF00005 ABC transporter 341 474 2.0E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_0944 1fc7671d1a4c245d623712aa5d26837d 554 SMART SM00382 32 237 4.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_0944 1fc7671d1a4c245d623712aa5d26837d 554 SMART SM00382 349 527 6.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_0944 1fc7671d1a4c245d623712aa5d26837d 554 Gene3D G3DSA:3.40.50.300 287 548 3.9E-73 T 14-10-2018 XF_0944 1fc7671d1a4c245d623712aa5d26837d 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 7.6E-288 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 XF_0944 1fc7671d1a4c245d623712aa5d26837d 554 Pfam PF00005 ABC transporter 24 192 3.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_0088 254fa508b28fc01e4e5f72290d8757f1 450 Pfam PF01926 50S ribosome-binding GTPase 200 318 4.3E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_0088 254fa508b28fc01e4e5f72290d8757f1 450 Gene3D G3DSA:3.40.50.11060 18 138 6.6E-36 T 14-10-2018 XF_0088 254fa508b28fc01e4e5f72290d8757f1 450 SUPERFAMILY SSF52540 198 365 3.35E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0088 254fa508b28fc01e4e5f72290d8757f1 450 Pfam PF13167 GTP-binding GTPase N-terminal 26 112 4.4E-29 T 14-10-2018 IPR025121 GTPase HflX, N-terminal XF_0088 254fa508b28fc01e4e5f72290d8757f1 450 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 364 5.4E-144 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 XF_0088 254fa508b28fc01e4e5f72290d8757f1 450 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 6.6E-12 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_0088 254fa508b28fc01e4e5f72290d8757f1 450 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 6.6E-12 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_0088 254fa508b28fc01e4e5f72290d8757f1 450 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 6.6E-12 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_0088 254fa508b28fc01e4e5f72290d8757f1 450 Pfam PF16360 GTP-binding GTPase Middle Region 114 193 3.2E-26 T 14-10-2018 IPR032305 GTP-binding protein, middle domain XF_0088 254fa508b28fc01e4e5f72290d8757f1 450 PIRSF PIRSF006809 3 424 2.4E-138 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 XF_0088 254fa508b28fc01e4e5f72290d8757f1 450 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 199 359 1.6E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XF_0088 254fa508b28fc01e4e5f72290d8757f1 450 Hamap MF_00900 GTPase HflX [hflX]. 27 394 45.951 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 XF_0088 254fa508b28fc01e4e5f72290d8757f1 450 Gene3D G3DSA:3.40.50.300 198 373 1.1E-40 T 14-10-2018 XF_0452 a3664fae0ce773d70ebcda91b7e32cc4 379 Gene3D G3DSA:3.30.479.30 94 225 5.7E-18 T 14-10-2018 XF_0452 a3664fae0ce773d70ebcda91b7e32cc4 379 PRINTS PR00721 Stomatin signature 118 139 2.3E-9 T 14-10-2018 IPR001972 Stomatin family GO:0016020 XF_0452 a3664fae0ce773d70ebcda91b7e32cc4 379 PRINTS PR00721 Stomatin signature 70 92 2.3E-9 T 14-10-2018 IPR001972 Stomatin family GO:0016020 XF_0452 a3664fae0ce773d70ebcda91b7e32cc4 379 PRINTS PR00721 Stomatin signature 153 170 2.3E-9 T 14-10-2018 IPR001972 Stomatin family GO:0016020 XF_0452 a3664fae0ce773d70ebcda91b7e32cc4 379 PRINTS PR00721 Stomatin signature 199 217 2.3E-9 T 14-10-2018 IPR001972 Stomatin family GO:0016020 XF_0452 a3664fae0ce773d70ebcda91b7e32cc4 379 Pfam PF01145 SPFH domain / Band 7 family 68 238 4.8E-29 T 14-10-2018 IPR001107 Band 7 domain XF_0452 a3664fae0ce773d70ebcda91b7e32cc4 379 SMART SM00244 63 223 8.2E-35 T 14-10-2018 IPR001107 Band 7 domain XF_0452 a3664fae0ce773d70ebcda91b7e32cc4 379 SUPERFAMILY SSF117892 96 230 2.48E-20 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily XF_0452 a3664fae0ce773d70ebcda91b7e32cc4 379 TIGRFAM TIGR01933 hflK: HflK protein 65 322 8.3E-106 T 14-10-2018 IPR010201 HflK GO:0016021 XF_0737 0611e38bb0b3fc182f0b27e2f53d4435 159 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 3 158 3.5E-61 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XF_0737 0611e38bb0b3fc182f0b27e2f53d4435 159 SUPERFAMILY SSF55200 71 158 4.97E-30 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 XF_0737 0611e38bb0b3fc182f0b27e2f53d4435 159 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 71 155 2.8E-35 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 XF_0737 0611e38bb0b3fc182f0b27e2f53d4435 159 Gene3D G3DSA:3.10.20.80 1 63 2.9E-28 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XF_0737 0611e38bb0b3fc182f0b27e2f53d4435 159 ProSitePatterns PS00938 Initiation factor 3 signature. 46 59 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 XF_0737 0611e38bb0b3fc182f0b27e2f53d4435 159 SUPERFAMILY SSF54364 2 66 1.02E-25 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XF_0737 0611e38bb0b3fc182f0b27e2f53d4435 159 Gene3D G3DSA:3.30.110.10 64 159 3.4E-36 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 XF_0737 0611e38bb0b3fc182f0b27e2f53d4435 159 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 64 4.4E-26 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XF_0737 0611e38bb0b3fc182f0b27e2f53d4435 159 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 158 27.826 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 Pfam PF07516 SecA Wing and Scaffold domain 615 826 1.3E-64 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 815 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 SUPERFAMILY SSF52540 6 411 6.55E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0806 eeacf8512171c11a336a979842aa7bcc 914 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 829 19.959 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 Pfam PF07517 SecA DEAD-like domain 7 398 2.5E-132 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 Pfam PF01043 SecA preprotein cross-linking domain 233 354 1.9E-38 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 SUPERFAMILY SSF81886 618 902 1.22E-78 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily XF_0806 eeacf8512171c11a336a979842aa7bcc 914 Gene3D G3DSA:3.40.50.300 22 411 1.7E-177 T 14-10-2018 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 Gene3D G3DSA:3.90.1440.10 229 364 1.7E-177 T 14-10-2018 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 Gene3D G3DSA:3.40.50.300 413 617 1.1E-84 T 14-10-2018 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 SMART SM00958 228 354 3.2E-78 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 SUPERFAMILY SSF52540 412 615 2.76E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0806 eeacf8512171c11a336a979842aa7bcc 914 Gene3D G3DSA:1.10.3060.10 619 830 2.8E-71 T 14-10-2018 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 SUPERFAMILY SSF81767 227 364 1.44E-43 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 SMART SM00957 6 398 0.0 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 63 87 1.8E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 335 357 1.8E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 372 389 1.8E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 409 422 1.8E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 117 127 1.8E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 170 190 1.8E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 101 115 1.8E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 ProSitePatterns PS01312 SecA family signature. 496 511 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 XF_0806 eeacf8512171c11a336a979842aa7bcc 914 Pfam PF02810 SEC-C motif 894 911 8.4E-11 T 14-10-2018 IPR004027 SEC-C motif XF_0165 cca3fd3336a6fbbb3ce070a0060c6819 509 Pfam PF13000 Acetyl-coenzyme A transporter 1 22 107 6.4E-10 T 14-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 XF_0165 cca3fd3336a6fbbb3ce070a0060c6819 509 Gene3D G3DSA:1.20.1250.20 17 207 3.9E-8 T 14-10-2018 XF_0165 cca3fd3336a6fbbb3ce070a0060c6819 509 Gene3D G3DSA:1.20.1250.20 284 501 1.6E-7 T 14-10-2018 XF_0165 cca3fd3336a6fbbb3ce070a0060c6819 509 SUPERFAMILY SSF103473 18 500 8.2E-22 T 14-10-2018 IPR036259 MFS transporter superfamily XF_2547 f05fb559ea48664e70e3d26894e5d5ab 387 Gene3D G3DSA:3.40.50.261 240 386 6.6E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XF_2547 f05fb559ea48664e70e3d26894e5d5ab 387 Gene3D G3DSA:3.30.1490.20 21 104 2.6E-90 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XF_2547 f05fb559ea48664e70e3d26894e5d5ab 387 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.939 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XF_2547 f05fb559ea48664e70e3d26894e5d5ab 387 SUPERFAMILY SSF52210 239 384 4.84E-52 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XF_2547 f05fb559ea48664e70e3d26894e5d5ab 387 Gene3D G3DSA:3.30.470.20 1 234 2.6E-90 T 14-10-2018 XF_2547 f05fb559ea48664e70e3d26894e5d5ab 387 Pfam PF08442 ATP-grasp domain 2 202 1.7E-73 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XF_2547 f05fb559ea48664e70e3d26894e5d5ab 387 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XF_2547 f05fb559ea48664e70e3d26894e5d5ab 387 Pfam PF00549 CoA-ligase 262 381 1.4E-25 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XF_2547 f05fb559ea48664e70e3d26894e5d5ab 387 PIRSF PIRSF001554 1 387 9.3E-152 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XF_2547 f05fb559ea48664e70e3d26894e5d5ab 387 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.7E-160 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XF_2547 f05fb559ea48664e70e3d26894e5d5ab 387 SUPERFAMILY SSF56059 1 238 9.02E-79 T 14-10-2018 XF_2534 5c5dd3986a5e409ab43ae121394a7316 225 Gene3D G3DSA:1.10.10.10 120 223 6.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_2534 5c5dd3986a5e409ab43ae121394a7316 225 SMART SM00862 146 220 1.4E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XF_2534 5c5dd3986a5e409ab43ae121394a7316 225 SMART SM00448 1 113 1.3E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2534 5c5dd3986a5e409ab43ae121394a7316 225 SUPERFAMILY SSF52172 2 171 1.71E-38 T 14-10-2018 IPR011006 CheY-like superfamily XF_2534 5c5dd3986a5e409ab43ae121394a7316 225 Pfam PF00072 Response regulator receiver domain 3 112 2.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2534 5c5dd3986a5e409ab43ae121394a7316 225 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-36 T 14-10-2018 XF_2534 5c5dd3986a5e409ab43ae121394a7316 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 1.2E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XF_1854 da53dfa273883e8f96bf5cf712a1b639 532 SMART SM00245 317 505 1.7E-8 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XF_1854 da53dfa273883e8f96bf5cf712a1b639 532 SUPERFAMILY SSF52096 268 523 1.82E-47 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XF_1854 da53dfa273883e8f96bf5cf712a1b639 532 Gene3D G3DSA:2.30.42.10 126 165 1.6E-6 T 14-10-2018 XF_1854 da53dfa273883e8f96bf5cf712a1b639 532 Gene3D G3DSA:2.30.42.10 261 328 2.9E-30 T 14-10-2018 XF_1854 da53dfa273883e8f96bf5cf712a1b639 532 Pfam PF03572 Peptidase family S41 350 503 2.9E-20 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XF_1854 da53dfa273883e8f96bf5cf712a1b639 532 Gene3D G3DSA:3.30.750.44 45 125 1.6E-6 T 14-10-2018 XF_1854 da53dfa273883e8f96bf5cf712a1b639 532 Gene3D G3DSA:3.30.750.44 466 480 2.9E-30 T 14-10-2018 XF_1854 da53dfa273883e8f96bf5cf712a1b639 532 Gene3D G3DSA:3.90.226.10 329 502 2.9E-30 T 14-10-2018 XF_1854 da53dfa273883e8f96bf5cf712a1b639 532 Pfam PF14684 Tricorn protease C1 domain 43 101 8.0E-9 T 14-10-2018 IPR028204 Tricorn protease C1 domain XF_1891 2e01c0331b69307648d33a804fff99fb 510 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 25 506 5.9E-105 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 XF_1891 2e01c0331b69307648d33a804fff99fb 510 SUPERFAMILY SSF103473 18 312 3.14E-20 T 14-10-2018 IPR036259 MFS transporter superfamily XF_1891 2e01c0331b69307648d33a804fff99fb 510 Gene3D G3DSA:1.20.1250.20 18 510 7.8E-121 T 14-10-2018 XF_1891 2e01c0331b69307648d33a804fff99fb 510 SUPERFAMILY SSF103473 240 506 4.71E-8 T 14-10-2018 IPR036259 MFS transporter superfamily XF_1891 2e01c0331b69307648d33a804fff99fb 510 Pfam PF00854 POT family 103 467 1.9E-65 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 XF_1891 2e01c0331b69307648d33a804fff99fb 510 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 164 176 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 XF_1889 87c11f5c9cd2915095687a4f63aecd32 259 Gene3D G3DSA:2.40.30.10 1 97 7.9E-28 T 14-10-2018 XF_1889 87c11f5c9cd2915095687a4f63aecd32 259 SUPERFAMILY SSF63380 7 100 4.95E-24 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XF_1889 87c11f5c9cd2915095687a4f63aecd32 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 229 1.5E-10 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 XF_1889 87c11f5c9cd2915095687a4f63aecd32 259 Pfam PF00970 Oxidoreductase FAD-binding domain 21 98 1.0E-6 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 XF_1889 87c11f5c9cd2915095687a4f63aecd32 259 SUPERFAMILY SSF52343 104 257 1.57E-39 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XF_1889 87c11f5c9cd2915095687a4f63aecd32 259 Gene3D G3DSA:3.40.50.80 101 255 5.0E-42 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XF_1602 f3cb0776fd33bf733c84f6c4acc3f2fd 283 SMART SM00382 26 204 2.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1602 f3cb0776fd33bf733c84f6c4acc3f2fd 283 SUPERFAMILY SSF52540 2 218 7.95E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1602 f3cb0776fd33bf733c84f6c4acc3f2fd 283 Pfam PF00005 ABC transporter 18 154 1.0E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_1602 f3cb0776fd33bf733c84f6c4acc3f2fd 283 Gene3D G3DSA:3.40.50.300 1 229 1.8E-40 T 14-10-2018 XF_2568 364d3806d82bfae496fc3dffaf78113d 246 SUPERFAMILY SSF52540 47 242 7.66E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2568 364d3806d82bfae496fc3dffaf78113d 246 Pfam PF00005 ABC transporter 49 181 4.1E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_2568 364d3806d82bfae496fc3dffaf78113d 246 Gene3D G3DSA:3.40.50.300 4 245 5.5E-37 T 14-10-2018 XF_2568 364d3806d82bfae496fc3dffaf78113d 246 SMART SM00382 58 229 0.001 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 SUPERFAMILY SSF56014 439 569 1.1E-32 T 14-10-2018 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 25 568 1.7E-281 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 Gene3D G3DSA:3.30.413.10 435 570 1.4E-35 T 14-10-2018 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 SUPERFAMILY SSF56014 154 351 6.28E-53 T 14-10-2018 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 487 503 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 180 335 6.2E-43 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 SUPERFAMILY SSF55124 19 153 4.74E-30 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 Gene3D G3DSA:3.90.480.10 87 176 5.1E-25 T 14-10-2018 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 SUPERFAMILY SSF55124 353 430 6.05E-16 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 82 145 3.7E-16 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 358 423 6.0E-13 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 18 579 54.843 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 439 567 0.0017 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 PRINTS PR00397 Sirohaem Fe-binding site signature 487 505 2.2E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 PRINTS PR00397 Sirohaem Fe-binding site signature 439 457 2.2E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XF_1498 af3b201f9bee75e1cf4af3f09ff2a4f2 586 Gene3D G3DSA:3.30.413.10 210 347 2.3E-39 T 14-10-2018 XF_1427 053855612247d486e04bcd0814d786da 411 Gene3D G3DSA:3.40.640.10 58 306 1.2E-141 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XF_1427 053855612247d486e04bcd0814d786da 411 Gene3D G3DSA:3.90.1150.10 23 395 1.2E-141 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XF_1427 053855612247d486e04bcd0814d786da 411 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 405 70.832 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 XF_1427 053855612247d486e04bcd0814d786da 411 PIRSF PIRSF000521 173 405 8.2E-33 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XF_1427 053855612247d486e04bcd0814d786da 411 PIRSF PIRSF000521 21 159 7.2E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XF_1427 053855612247d486e04bcd0814d786da 411 Pfam PF00202 Aminotransferase class-III 20 402 2.4E-112 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XF_1427 053855612247d486e04bcd0814d786da 411 SUPERFAMILY SSF53383 12 403 2.15E-119 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XF_1427 053855612247d486e04bcd0814d786da 411 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 402 8.6E-140 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 XF_1427 053855612247d486e04bcd0814d786da 411 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 224 261 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XF_0768 b132452141dc5303432040f084ce6c71 431 Gene3D G3DSA:3.60.15.10 143 426 1.0E-103 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XF_0768 b132452141dc5303432040f084ce6c71 431 SMART SM00849 156 345 4.9E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase XF_0768 b132452141dc5303432040f084ce6c71 431 Pfam PF04273 Putative phosphatase (DUF442) 3 111 7.8E-50 T 14-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 XF_0768 b132452141dc5303432040f084ce6c71 431 SUPERFAMILY SSF56281 151 426 1.16E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XF_0768 b132452141dc5303432040f084ce6c71 431 Gene3D G3DSA:3.90.190.10 1 142 5.5E-37 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like XF_0768 b132452141dc5303432040f084ce6c71 431 SUPERFAMILY SSF52799 5 98 2.02E-8 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like XF_0768 b132452141dc5303432040f084ce6c71 431 Pfam PF00753 Metallo-beta-lactamase superfamily 158 345 1.1E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase XF_0768 b132452141dc5303432040f084ce6c71 431 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 4 132 3.0E-28 T 14-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 XF_1607 418765d00cec45c9f0a4ea0302f30414 78 Pfam PF04102 SlyX 14 78 2.0E-13 T 14-10-2018 IPR007236 SlyX XF_1607 418765d00cec45c9f0a4ea0302f30414 78 Gene3D G3DSA:1.20.5.300 1 59 1.5E-32 T 14-10-2018 XF_1607 418765d00cec45c9f0a4ea0302f30414 78 Hamap MF_00715 Protein SlyX [slyX]. 12 78 13.466 T 14-10-2018 IPR007236 SlyX XF_0593 6473cd921007656a3b0b1497d01f5409 109 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 25 86 5.8E-25 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain XF_0593 6473cd921007656a3b0b1497d01f5409 109 SUPERFAMILY SSF47781 24 89 2.33E-25 T 14-10-2018 IPR010994 RuvA domain 2-like XF_0593 6473cd921007656a3b0b1497d01f5409 109 Pfam PF12836 Helix-hairpin-helix motif 23 86 5.8E-23 T 14-10-2018 XF_0593 6473cd921007656a3b0b1497d01f5409 109 Gene3D G3DSA:1.10.150.280 18 91 1.3E-20 T 14-10-2018 XF_0843 31d33c677efde7fbcf00b14841144d3a 516 PIRSF PIRSF028846 71 506 1.1E-199 T 14-10-2018 IPR008313 Metal-independent alpha-mannosidase XF_0843 31d33c677efde7fbcf00b14841144d3a 516 Gene3D G3DSA:1.50.10.10 77 515 2.1E-165 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 XF_0843 31d33c677efde7fbcf00b14841144d3a 516 SMART SM01149 93 496 8.3E-244 T 14-10-2018 IPR008313 Metal-independent alpha-mannosidase XF_0843 31d33c677efde7fbcf00b14841144d3a 516 Pfam PF06824 Metal-independent alpha-mannosidase (GH125) 93 495 4.2E-149 T 14-10-2018 IPR008313 Metal-independent alpha-mannosidase XF_0843 31d33c677efde7fbcf00b14841144d3a 516 SUPERFAMILY SSF48208 64 505 2.96E-165 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF03895 YadA-like membrane anchor domain 1130 1190 2.2E-18 T 14-10-2018 IPR005594 YadA-like, C-terminal XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1017 1043 1.6E-5 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05658 Head domain of trimeric autotransporter adhesin 897 923 1.3E-7 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05658 Head domain of trimeric autotransporter adhesin 869 895 2.6E-4 T 14-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF101967 176 338 4.45E-17 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF101967 1010 1096 7.72E-24 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:2.150.10.10 153 337 4.0E-28 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:2.150.10.10 992 1093 4.6E-28 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:3.30.1300.30 1094 1190 1.7E-31 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1075 1112 1.2E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 568 609 2.1E-14 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 318 359 8.0E-9 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 818 847 1.4E-11 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 443 484 3.6E-11 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 693 734 1.8E-14 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 961 994 5.7E-8 T 14-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF101967 608 715 6.54E-15 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF101967 343 467 2.62E-13 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:2.150.10.10 839 990 3.8E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF101967 843 983 4.71E-16 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:3.30.390.90 659 698 4.6E-14 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:3.30.390.90 786 823 4.7E-14 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:3.30.390.90 534 573 4.8E-14 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:3.30.390.90 396 447 3.0E-10 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF54523 1086 1190 9.42E-24 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:2.20.25.490 338 394 3.2E-16 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:2.20.25.490 585 644 1.1E-15 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:2.20.25.490 709 770 3.4E-15 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:2.20.25.490 462 519 1.6E-14 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF101967 722 840 7.72E-14 T 14-10-2018 XF_1981 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF101967 471 590 7.32E-15 T 14-10-2018 XF_0204 4dd8816332880be30df1f17374ba9270 1212 Gene3D G3DSA:3.20.20.140 8 300 1.8E-78 T 14-10-2018 XF_0204 4dd8816332880be30df1f17374ba9270 1212 SMART SM00481 26 107 4.0E-14 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal XF_0204 4dd8816332880be30df1f17374ba9270 1212 Pfam PF14579 Helix-hairpin-helix motif 843 931 2.8E-25 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_0204 4dd8816332880be30df1f17374ba9270 1212 Pfam PF01336 OB-fold nucleic acid binding domain 1045 1113 5.3E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XF_0204 4dd8816332880be30df1f17374ba9270 1212 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 25 1076 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_0204 4dd8816332880be30df1f17374ba9270 1212 Pfam PF02811 PHP domain 27 203 2.8E-24 T 14-10-2018 IPR004013 PHP domain GO:0003824 XF_0204 4dd8816332880be30df1f17374ba9270 1212 Gene3D G3DSA:1.10.10.1600 462 546 4.5E-29 T 14-10-2018 XF_0204 4dd8816332880be30df1f17374ba9270 1212 SUPERFAMILY SSF89550 25 291 8.04E-11 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 XF_0204 4dd8816332880be30df1f17374ba9270 1212 SUPERFAMILY SSF50249 1039 1104 8.0E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_0204 4dd8816332880be30df1f17374ba9270 1212 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 323 767 5.0E-169 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1155 18999e314e0d8ca22aefe03745392ff5 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 46.246 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 XF_1155 18999e314e0d8ca22aefe03745392ff5 275 Gene3D G3DSA:2.30.30.30 118 195 1.4E-30 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 XF_1155 18999e314e0d8ca22aefe03745392ff5 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1155 18999e314e0d8ca22aefe03745392ff5 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.1E-33 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1155 18999e314e0d8ca22aefe03745392ff5 275 SUPERFAMILY SSF50104 126 272 2.17E-57 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily XF_1155 18999e314e0d8ca22aefe03745392ff5 275 PIRSF PIRSF002158 9 275 2.8E-97 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1155 18999e314e0d8ca22aefe03745392ff5 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 4.4E-54 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 XF_1155 18999e314e0d8ca22aefe03745392ff5 275 SUPERFAMILY SSF50249 3 125 6.17E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1155 18999e314e0d8ca22aefe03745392ff5 275 Gene3D G3DSA:4.10.950.10 196 274 1.2E-34 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1155 18999e314e0d8ca22aefe03745392ff5 275 SMART SM01382 124 253 1.4E-89 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 XF_1155 18999e314e0d8ca22aefe03745392ff5 275 SMART SM01383 42 118 2.7E-42 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1155 18999e314e0d8ca22aefe03745392ff5 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 1.4E-131 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 XF_1155 18999e314e0d8ca22aefe03745392ff5 275 Gene3D G3DSA:2.40.50.140 1 114 5.2E-46 T 14-10-2018 XF_1906 e6caa10c01862e987ea9db4b4f23776f 244 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 6 236 1.2E-87 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1906 e6caa10c01862e987ea9db4b4f23776f 244 SUPERFAMILY SSF75625 7 237 4.45E-83 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1906 e6caa10c01862e987ea9db4b4f23776f 244 Pfam PF01709 Transcriptional regulator 7 236 3.0E-85 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1906 e6caa10c01862e987ea9db4b4f23776f 244 Gene3D G3DSA:3.30.70.980 127 204 3.3E-50 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1906 e6caa10c01862e987ea9db4b4f23776f 244 Gene3D G3DSA:1.10.10.200 15 78 4.1E-26 T 14-10-2018 IPR017856 Integrase-like, N-terminal XF_1906 e6caa10c01862e987ea9db4b4f23776f 244 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 2 238 31.998 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1906 e6caa10c01862e987ea9db4b4f23776f 244 Gene3D G3DSA:3.30.70.980 82 235 3.3E-50 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1454 ead4e5cc0b2cd87b9e375395116a14f7 181 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 48 166 17.495 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 XF_1454 ead4e5cc0b2cd87b9e375395116a14f7 181 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 49 161 6.1E-20 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 XF_2190 5905020502438044413bc9a2183b4a3e 70 SUPERFAMILY SSF160472 1 63 3.79E-25 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_2190 5905020502438044413bc9a2183b4a3e 70 Pfam PF04591 Protein of unknown function, DUF596 1 70 1.3E-28 T 14-10-2018 IPR007670 Protein of unknown function DUF596 XF_2190 5905020502438044413bc9a2183b4a3e 70 Gene3D G3DSA:1.10.3510.10 1 69 2.3E-15 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_1536 66ab68a8d2399c28ad1f83a96fcfec48 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.337 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid XF_1536 66ab68a8d2399c28ad1f83a96fcfec48 130 SUPERFAMILY SSF54211 6 130 8.34E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_1536 66ab68a8d2399c28ad1f83a96fcfec48 130 Gene3D G3DSA:3.30.230.10 2 130 1.0E-50 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XF_1536 66ab68a8d2399c28ad1f83a96fcfec48 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 8.6E-45 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 XF_1536 66ab68a8d2399c28ad1f83a96fcfec48 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 XF_0572 d48a976043c909694b0bb0c4431a4ce5 173 SUPERFAMILY SSF54637 3 170 1.79E-52 T 14-10-2018 IPR029069 HotDog domain superfamily XF_0572 d48a976043c909694b0bb0c4431a4ce5 173 Pfam PF07977 FabA-like domain 29 159 2.0E-50 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XF_0572 d48a976043c909694b0bb0c4431a4ce5 173 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 173 49.356 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XF_0572 d48a976043c909694b0bb0c4431a4ce5 173 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 173 1.8E-85 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XF_0572 d48a976043c909694b0bb0c4431a4ce5 173 Gene3D G3DSA:3.10.129.10 2 173 7.2E-60 T 14-10-2018 XF_1282 72e16bd09d4bb8873ab262495ac70a54 503 ProSitePatterns PS00131 Serine carboxypeptidases, serine active site. 204 211 - T 14-10-2018 IPR018202 Serine carboxypeptidase, serine active site XF_1282 72e16bd09d4bb8873ab262495ac70a54 503 Pfam PF00450 Serine carboxypeptidase 91 464 9.4E-21 T 14-10-2018 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 XF_1282 72e16bd09d4bb8873ab262495ac70a54 503 SUPERFAMILY SSF53474 52 483 9.07E-71 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_2553 f8584ddd9c515ac6b50ed65738ed9b1b 354 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 17 341 2.1E-139 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XF_2553 f8584ddd9c515ac6b50ed65738ed9b1b 354 Pfam PF01008 Initiation factor 2 subunit family 57 341 7.5E-76 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 XF_2553 f8584ddd9c515ac6b50ed65738ed9b1b 354 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 42 341 2.3E-112 T 14-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XF_2553 f8584ddd9c515ac6b50ed65738ed9b1b 354 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 352 38.513 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XF_2553 f8584ddd9c515ac6b50ed65738ed9b1b 354 Gene3D G3DSA:1.20.120.420 14 153 3.5E-40 T 14-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XF_2553 f8584ddd9c515ac6b50ed65738ed9b1b 354 Gene3D G3DSA:3.40.50.10470 159 351 1.7E-64 T 14-10-2018 XF_2553 f8584ddd9c515ac6b50ed65738ed9b1b 354 SUPERFAMILY SSF100950 11 345 1.67E-111 T 14-10-2018 IPR037171 NagB/RpiA transferase-like XF_0039 7aa8d11a2533ac35ca04199c49498e9c 134 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 1.9E-13 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 XF_0039 7aa8d11a2533ac35ca04199c49498e9c 134 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 1.9E-13 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 XF_0039 7aa8d11a2533ac35ca04199c49498e9c 134 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.9E-13 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 XF_0039 7aa8d11a2533ac35ca04199c49498e9c 134 SUPERFAMILY SSF81330 12 129 7.85E-35 T 14-10-2018 IPR036019 Gated mechanosensitive channel XF_0039 7aa8d11a2533ac35ca04199c49498e9c 134 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 133 1.2E-42 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L XF_0039 7aa8d11a2533ac35ca04199c49498e9c 134 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 24.049 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 XF_0039 7aa8d11a2533ac35ca04199c49498e9c 134 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 1.6E-40 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 XF_0039 7aa8d11a2533ac35ca04199c49498e9c 134 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 14-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site XF_0039 7aa8d11a2533ac35ca04199c49498e9c 134 Gene3D G3DSA:1.10.1200.120 3 134 4.4E-39 T 14-10-2018 IPR036019 Gated mechanosensitive channel XF_0998 f062d31aacaaa197902e69b9cbc3c50f 336 Gene3D G3DSA:3.40.50.1370 168 331 1.2E-113 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XF_0998 f062d31aacaaa197902e69b9cbc3c50f 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 287 296 9.1E-11 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XF_0998 f062d31aacaaa197902e69b9cbc3c50f 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 9.1E-11 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XF_0998 f062d31aacaaa197902e69b9cbc3c50f 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 9.1E-11 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XF_0998 f062d31aacaaa197902e69b9cbc3c50f 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 170 332 4.2E-32 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 XF_0998 f062d31aacaaa197902e69b9cbc3c50f 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 161 7.9E-34 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 XF_0998 f062d31aacaaa197902e69b9cbc3c50f 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 315 329 3.0E-9 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_0998 f062d31aacaaa197902e69b9cbc3c50f 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 35 57 3.0E-9 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_0998 f062d31aacaaa197902e69b9cbc3c50f 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 147 164 3.0E-9 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_0998 f062d31aacaaa197902e69b9cbc3c50f 336 SUPERFAMILY SSF53671 2 334 1.28E-70 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XF_0998 f062d31aacaaa197902e69b9cbc3c50f 336 Gene3D G3DSA:3.40.50.1370 5 167 1.2E-113 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 1.4E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.4E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 488 502 1.4E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 1.4E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 381 397 1.4E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 SMART SM00437 252 525 2.3E-115 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF01131 DNA topoisomerase 133 562 2.3E-130 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 Gene3D G3DSA:1.10.290.10 260 396 3.1E-170 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 618 5.3E-227 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 Gene3D G3DSA:1.10.460.10 139 565 3.1E-170 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 674 55.583 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 Gene3D G3DSA:3.40.50.140 1 138 7.5E-50 T 14-10-2018 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 312 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF01751 Toprim domain 5 117 5.2E-26 T 14-10-2018 IPR006171 TOPRIM domain XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF13368 Topoisomerase C-terminal repeat 715 757 1.4E-13 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF13368 Topoisomerase C-terminal repeat 658 703 8.1E-11 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF13368 Topoisomerase C-terminal repeat 594 653 8.9E-12 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 Gene3D G3DSA:2.70.20.10 188 472 3.1E-170 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 SMART SM00493 3 103 7.8E-32 T 14-10-2018 IPR006171 TOPRIM domain XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 SMART SM00436 108 196 1.5E-46 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 XF_0920 a2bb845f82c3c320e6427e10fe3010b5 815 SUPERFAMILY SSF56712 3 576 3.53E-186 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 Gene3D G3DSA:2.40.50.140 642 714 6.5E-29 T 14-10-2018 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 Gene3D G3DSA:3.30.230.70 8 248 4.7E-79 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 Pfam PF01138 3' exoribonuclease family, domain 1 34 162 3.1E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 Pfam PF01138 3' exoribonuclease family, domain 1 344 476 8.5E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 SUPERFAMILY SSF54791 575 659 1.35E-22 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 SUPERFAMILY SSF55666 470 569 1.96E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 SUPERFAMILY SSF50249 631 713 2.29E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 SUPERFAMILY SSF46915 257 340 8.63E-15 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 PIRSF PIRSF005499 19 718 3.4E-293 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 Pfam PF00575 S1 RNA binding domain 639 710 3.6E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 Gene3D G3DSA:3.30.1370.10 570 641 1.5E-19 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 SUPERFAMILY SSF54211 19 162 9.62E-50 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 SUPERFAMILY SSF54211 315 508 3.49E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 263 340 4.1E-14 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 Pfam PF00013 KH domain 577 633 1.1E-9 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 SUPERFAMILY SSF55666 163 254 2.66E-27 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 Pfam PF03725 3' exoribonuclease family, domain 2 479 547 5.0E-6 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 Pfam PF03725 3' exoribonuclease family, domain 2 165 227 5.3E-10 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 28 712 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 SMART SM00316 640 710 6.0E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 SMART SM00322 572 637 1.3E-10 T 14-10-2018 IPR004087 K Homology domain GO:0003676 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 Gene3D G3DSA:3.30.230.70 252 569 4.9E-114 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XF_0239 3e0566d55b9d4ba79f97061f5eb01049 719 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 21 713 30.364 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XF_0845 358acdb075bb7a38e3d97dd124092e32 882 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 45 326 4.9E-49 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XF_0845 358acdb075bb7a38e3d97dd124092e32 882 SMART SM01217 792 860 1.2E-23 T 14-10-2018 IPR026891 Fibronectin type III-like domain XF_0845 358acdb075bb7a38e3d97dd124092e32 882 Gene3D G3DSA:3.20.20.300 29 346 5.1E-96 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 XF_0845 358acdb075bb7a38e3d97dd124092e32 882 SMART SM00758 452 606 1.2E-36 T 14-10-2018 IPR011658 PA14 domain XF_0845 358acdb075bb7a38e3d97dd124092e32 882 SUPERFAMILY SSF52279 369 758 1.02E-51 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XF_0845 358acdb075bb7a38e3d97dd124092e32 882 Gene3D G3DSA:3.40.50.1700 354 452 5.9E-17 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XF_0845 358acdb075bb7a38e3d97dd124092e32 882 Gene3D G3DSA:2.60.40.10 758 865 1.8E-29 T 14-10-2018 IPR013783 Immunoglobulin-like fold XF_0845 358acdb075bb7a38e3d97dd124092e32 882 PRINTS PR00133 Glycosyl hydrolase family 3 signature 180 196 2.2E-11 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XF_0845 358acdb075bb7a38e3d97dd124092e32 882 PRINTS PR00133 Glycosyl hydrolase family 3 signature 84 103 2.2E-11 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XF_0845 358acdb075bb7a38e3d97dd124092e32 882 PRINTS PR00133 Glycosyl hydrolase family 3 signature 251 269 2.2E-11 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XF_0845 358acdb075bb7a38e3d97dd124092e32 882 Pfam PF07691 PA14 domain 452 605 3.8E-45 T 14-10-2018 IPR011658 PA14 domain XF_0845 358acdb075bb7a38e3d97dd124092e32 882 Gene3D G3DSA:3.40.50.1700 537 757 4.4E-57 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XF_0845 358acdb075bb7a38e3d97dd124092e32 882 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 369 755 1.4E-60 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 XF_0845 358acdb075bb7a38e3d97dd124092e32 882 SUPERFAMILY SSF51445 27 368 2.32E-95 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily XF_0845 358acdb075bb7a38e3d97dd124092e32 882 SUPERFAMILY SSF56988 455 633 1.83E-24 T 14-10-2018 XF_0845 358acdb075bb7a38e3d97dd124092e32 882 Pfam PF14310 Fibronectin type III-like domain 792 858 4.8E-19 T 14-10-2018 IPR026891 Fibronectin type III-like domain XF_0141 802e87c41d3bc629a0d980f873548b6d 609 Gene3D G3DSA:3.40.50.10490 447 594 3.7E-140 T 14-10-2018 XF_0141 802e87c41d3bc629a0d980f873548b6d 609 Pfam PF01380 SIS domain 295 417 7.7E-30 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XF_0141 802e87c41d3bc629a0d980f873548b6d 609 Pfam PF01380 SIS domain 463 591 4.6E-26 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XF_0141 802e87c41d3bc629a0d980f873548b6d 609 SUPERFAMILY SSF56235 2 233 1.54E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XF_0141 802e87c41d3bc629a0d980f873548b6d 609 Pfam PF13522 Glutamine amidotransferase domain 63 192 4.6E-21 T 14-10-2018 XF_0141 802e87c41d3bc629a0d980f873548b6d 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 38.629 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 XF_0141 802e87c41d3bc629a0d980f873548b6d 609 Gene3D G3DSA:3.40.50.10490 248 608 3.7E-140 T 14-10-2018 XF_0141 802e87c41d3bc629a0d980f873548b6d 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 5.1E-262 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 XF_0141 802e87c41d3bc629a0d980f873548b6d 609 SUPERFAMILY SSF53697 244 609 3.34E-112 T 14-10-2018 XF_0141 802e87c41d3bc629a0d980f873548b6d 609 Gene3D G3DSA:3.60.20.10 2 239 2.4E-75 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XF_0033 89a658c28b9aefcef2a0969b5cafd691 139 PRINTS PR00885 Bacterial general secretion pathway protein H signature 13 27 1.4E-5 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 XF_0033 89a658c28b9aefcef2a0969b5cafd691 139 PRINTS PR00885 Bacterial general secretion pathway protein H signature 28 42 1.4E-5 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 XF_0033 89a658c28b9aefcef2a0969b5cafd691 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 38 1.3E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0033 89a658c28b9aefcef2a0969b5cafd691 139 SUPERFAMILY SSF54523 18 133 1.31E-26 T 14-10-2018 XF_0033 89a658c28b9aefcef2a0969b5cafd691 139 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 40 124 1.3E-24 T 14-10-2018 IPR031982 Type IV minor pilin ComP XF_0033 89a658c28b9aefcef2a0969b5cafd691 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 38 3.4E-11 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0033 89a658c28b9aefcef2a0969b5cafd691 139 Gene3D G3DSA:3.30.700.10 18 138 1.0E-22 T 14-10-2018 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1074 13.44 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1059 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 Gene3D G3DSA:3.40.50.20 1 116 1.2E-48 T 14-10-2018 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.294 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 SUPERFAMILY SSF56059 128 401 1.11E-107 T 14-10-2018 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 428 548 2.1E-37 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 SMART SM00851 962 1048 1.0E-28 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 Gene3D G3DSA:3.40.50.20 555 663 4.8E-49 T 14-10-2018 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 Gene3D G3DSA:3.40.50.1380 945 1079 6.3E-37 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 Gene3D G3DSA:3.30.470.20 119 403 4.8E-127 T 14-10-2018 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.2E-65 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.2E-65 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.2E-65 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.2E-65 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.2E-65 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.2E-65 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.2E-65 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 Gene3D G3DSA:3.30.470.20 666 942 3.2E-113 T 14-10-2018 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 SUPERFAMILY SSF52440 1 127 2.73E-48 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 SUPERFAMILY SSF52440 558 676 2.01E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 SUPERFAMILY SSF56059 674 939 6.72E-101 T 14-10-2018 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 Pfam PF02142 MGS-like domain 963 1047 1.2E-16 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 SUPERFAMILY SSF48108 396 555 1.28E-48 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 SUPERFAMILY SSF52335 944 1077 5.36E-38 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 882 1.4E-38 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.6E-70 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 Gene3D G3DSA:1.10.1030.10 404 554 4.1E-45 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1107 957d1e098b6fab3b2499e874e3384f2c 1080 SMART SM01096 425 548 6.0E-69 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 Pfam PF00204 DNA gyrase B 218 384 3.4E-38 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 627 46.196 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 SMART SM00433 34 623 2.6E-201 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 Gene3D G3DSA:3.30.565.10 3 215 1.1E-73 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 413 427 1.6E-57 T 14-10-2018 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 516 528 1.6E-57 T 14-10-2018 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.6E-57 T 14-10-2018 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.6E-57 T 14-10-2018 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 265 278 1.6E-57 T 14-10-2018 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 496 513 1.6E-57 T 14-10-2018 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.6E-57 T 14-10-2018 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 478 494 1.6E-57 T 14-10-2018 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 561 577 1.6E-57 T 14-10-2018 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 SUPERFAMILY SSF54211 217 380 4.55E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 SMART SM00387 27 173 2.0E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 Pfam PF01751 Toprim domain 412 510 5.2E-12 T 14-10-2018 IPR006171 TOPRIM domain XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 619 4.9E-23 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 SUPERFAMILY SSF56719 387 620 9.42E-74 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 Gene3D G3DSA:3.40.50.670 389 622 5.1E-85 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 Gene3D G3DSA:3.30.230.10 218 388 9.8E-56 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 4.6E-95 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 4.6E-95 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 4.6E-95 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 4.6E-95 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 4.6E-95 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 4.6E-95 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 4.6E-95 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 4.6E-95 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 4.6E-95 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 4.6E-95 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 4.6E-95 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 4.6E-95 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 4.6E-95 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 4.6E-95 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 SUPERFAMILY SSF55874 4 215 3.8E-65 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 4 623 3.3E-285 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1286 4bfeb83773cc2ef20821a95f0bf7512c 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 2.2E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_1768 24bed13154da03f8426efea74979878e 313 SUPERFAMILY SSF53850 108 311 1.99E-37 T 14-10-2018 XF_1768 24bed13154da03f8426efea74979878e 313 Gene3D G3DSA:3.40.190.10 111 310 5.5E-50 T 14-10-2018 XF_1768 24bed13154da03f8426efea74979878e 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 81 3.3E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1768 24bed13154da03f8426efea74979878e 313 Pfam PF03466 LysR substrate binding domain 107 311 3.9E-34 T 14-10-2018 IPR005119 LysR, substrate-binding XF_1768 24bed13154da03f8426efea74979878e 313 Gene3D G3DSA:3.40.190.10 183 286 5.5E-50 T 14-10-2018 XF_1768 24bed13154da03f8426efea74979878e 313 Gene3D G3DSA:1.10.10.10 21 108 9.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1768 24bed13154da03f8426efea74979878e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 59 70 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1768 24bed13154da03f8426efea74979878e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 59 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1768 24bed13154da03f8426efea74979878e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1768 24bed13154da03f8426efea74979878e 313 SUPERFAMILY SSF46785 22 130 9.66E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_2051 e8c227c11290067e39850664f5ecf5ed 296 Pfam PF03524 Conjugal transfer protein 71 294 6.4E-53 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX XF_2051 e8c227c11290067e39850664f5ecf5ed 296 Gene3D G3DSA:2.60.40.2500 189 295 9.5E-7 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily XF_2051 e8c227c11290067e39850664f5ecf5ed 296 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 69 282 7.5E-78 T 14-10-2018 IPR014142 P-type conjugative transfer protein TrbG XF_0430 4e733205ec0475165c78beeab57ba83d 577 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 247 5.4E-41 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal XF_0430 4e733205ec0475165c78beeab57ba83d 577 Pfam PF13662 Toprim domain 256 320 1.9E-14 T 14-10-2018 IPR006171 TOPRIM domain XF_0430 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:3.40.1360.10 237 363 1.2E-41 T 14-10-2018 XF_0430 4e733205ec0475165c78beeab57ba83d 577 SMART SM00766 443 570 1.9E-35 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 XF_0430 4e733205ec0475165c78beeab57ba83d 577 Pfam PF10410 DnaB-helicase binding domain of primase 365 418 2.2E-11 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 XF_0430 4e733205ec0475165c78beeab57ba83d 577 TIGRFAM TIGR01391 dnaG: DNA primase 3 413 5.5E-139 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 XF_0430 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:3.90.580.10 1 101 1.2E-36 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 XF_0430 4e733205ec0475165c78beeab57ba83d 577 Pfam PF01807 CHC2 zinc finger 5 100 1.2E-36 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XF_0430 4e733205ec0475165c78beeab57ba83d 577 SUPERFAMILY SSF117023 440 573 1.11E-28 T 14-10-2018 XF_0430 4e733205ec0475165c78beeab57ba83d 577 Hamap MF_00974 DNA primase [dnaG]. 3 571 28.081 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 XF_0430 4e733205ec0475165c78beeab57ba83d 577 SMART SM00493 255 326 2.0E-20 T 14-10-2018 IPR006171 TOPRIM domain XF_0430 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:1.20.50.20 364 419 2.7E-13 T 14-10-2018 XF_0430 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:1.10.860.10 431 576 2.1E-30 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal XF_0430 4e733205ec0475165c78beeab57ba83d 577 SUPERFAMILY SSF56731 113 417 6.8E-105 T 14-10-2018 XF_0430 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:3.90.980.10 108 236 4.2E-39 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily XF_0430 4e733205ec0475165c78beeab57ba83d 577 SUPERFAMILY SSF57783 1 99 4.42E-35 T 14-10-2018 XF_0430 4e733205ec0475165c78beeab57ba83d 577 Pfam PF08278 DNA primase DnaG DnaB-binding 446 569 3.1E-24 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 XF_0430 4e733205ec0475165c78beeab57ba83d 577 SMART SM00400 35 89 1.0E-29 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XF_0281 63754ce84b6cdb8cde14b0cd6f54ed84 389 Pfam PF01594 AI-2E family transporter 54 376 1.7E-43 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like XF_1099 2dc6af70ecc86ebfec923cb2787f84d7 191 Gene3D G3DSA:1.20.144.10 127 191 1.0E-5 T 14-10-2018 XF_1099 2dc6af70ecc86ebfec923cb2787f84d7 191 SUPERFAMILY SSF48317 133 186 2.49E-6 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 Gene3D G3DSA:2.40.30.10 237 337 1.6E-32 T 14-10-2018 XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 Gene3D G3DSA:3.40.50.300 39 236 6.3E-67 T 14-10-2018 XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 Pfam PF00009 Elongation factor Tu GTP binding domain 42 233 5.8E-56 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 SUPERFAMILY SSF54980 340 429 3.96E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 43 193 1.3E-26 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 SUPERFAMILY SSF52540 37 245 1.52E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 43 641 8.9E-281 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 Pfam PF03144 Elongation factor Tu domain 2 260 327 5.0E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 Pfam PF00679 Elongation factor G C-terminus 438 516 5.2E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 SMART SM00838 437 526 0.0047 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 Gene3D G3DSA:3.30.70.240 431 524 2.2E-123 T 14-10-2018 XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 Gene3D G3DSA:2.40.50.250 525 641 2.2E-123 T 14-10-2018 XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 PRINTS PR00315 GTP-binding elongation factor signature 161 170 5.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 PRINTS PR00315 GTP-binding elongation factor signature 45 58 5.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 SUPERFAMILY SSF54980 440 554 8.15E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 Gene3D G3DSA:3.30.70.870 344 632 2.2E-123 T 14-10-2018 XF_1213 33fb9961d4c99bfed92ecac21e7c1ab6 646 SUPERFAMILY SSF50447 190 337 8.73E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XF_2478 33c473c3c075f03f4d0cf4df0be5e0d3 135 Gene3D G3DSA:1.10.443.10 4 101 1.7E-10 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XF_2478 33c473c3c075f03f4d0cf4df0be5e0d3 135 Pfam PF00589 Phage integrase family 34 77 1.9E-5 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XF_2478 33c473c3c075f03f4d0cf4df0be5e0d3 135 SUPERFAMILY SSF56349 17 90 5.0E-11 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XF_1012 818d2f2ba6197e8ccd8aa07b9dec7e6f 167 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 17 160 43.618 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 XF_1012 818d2f2ba6197e8ccd8aa07b9dec7e6f 167 SUPERFAMILY SSF53927 8 161 1.51E-53 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XF_1012 818d2f2ba6197e8ccd8aa07b9dec7e6f 167 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 64 101 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 XF_1012 818d2f2ba6197e8ccd8aa07b9dec7e6f 167 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 13 112 2.8E-24 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain XF_1012 818d2f2ba6197e8ccd8aa07b9dec7e6f 167 Gene3D G3DSA:3.40.140.10 10 165 6.6E-54 T 14-10-2018 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Gene3D G3DSA:2.40.50.100 1047 1150 8.5E-27 T 14-10-2018 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Pfam PF04998 RNA polymerase Rpb1, domain 5 789 1338 1.1E-77 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Gene3D G3DSA:1.10.1790.20 1159 1337 1.6E-62 T 14-10-2018 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 SMART SM00663 258 537 5.9E-180 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 42 1389 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Pfam PF04983 RNA polymerase Rpb1, domain 3 512 667 5.2E-28 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Pfam PF00623 RNA polymerase Rpb1, domain 2 412 508 4.0E-27 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Pfam PF00623 RNA polymerase Rpb1, domain 2 367 418 3.5E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Gene3D G3DSA:2.40.50.100 972 1046 5.0E-27 T 14-10-2018 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Pfam PF04997 RNA polymerase Rpb1, domain 1 40 365 3.7E-83 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Gene3D G3DSA:1.10.150.390 1339 1397 1.1E-27 T 14-10-2018 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Gene3D G3DSA:1.10.40.90 397 439 5.6E-22 T 14-10-2018 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 SUPERFAMILY SSF64484 39 1386 0.0 T 14-10-2018 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Gene3D G3DSA:1.10.274.100 513 663 1.6E-40 T 14-10-2018 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Gene3D G3DSA:2.40.50.100 1175 1238 1.6E-62 T 14-10-2018 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Gene3D G3DSA:1.10.132.30 664 813 4.6E-62 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 33 1403 18.722 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2632 026eb0da86548abb669dfde46451d4ac 1430 Pfam PF05000 RNA polymerase Rpb1, domain 4 697 786 1.3E-18 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_1082 7414c6ba988250b4d06088241ad3a03f 339 SUPERFAMILY SSF52540 54 198 5.42E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1082 7414c6ba988250b4d06088241ad3a03f 339 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 34 319 9.6E-65 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 XF_1082 7414c6ba988250b4d06088241ad3a03f 339 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 8 338 36.009 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 XF_1082 7414c6ba988250b4d06088241ad3a03f 339 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 22 333 1.4E-99 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 XF_0846 56ebb3a1a88fa894bc0006fc23f1bf4f 891 SUPERFAMILY SSF49303 237 344 1.4E-18 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily XF_0846 56ebb3a1a88fa894bc0006fc23f1bf4f 891 Gene3D G3DSA:2.60.40.10 796 882 2.3E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold XF_0846 56ebb3a1a88fa894bc0006fc23f1bf4f 891 Pfam PF00703 Glycosyl hydrolases family 2 236 345 3.6E-9 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 XF_0846 56ebb3a1a88fa894bc0006fc23f1bf4f 891 SUPERFAMILY SSF49303 701 799 3.45E-10 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily XF_0846 56ebb3a1a88fa894bc0006fc23f1bf4f 891 Gene3D G3DSA:2.60.120.260 35 234 2.5E-59 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily XF_0846 56ebb3a1a88fa894bc0006fc23f1bf4f 891 Gene3D G3DSA:3.20.20.80 344 697 1.1E-120 T 14-10-2018 XF_0846 56ebb3a1a88fa894bc0006fc23f1bf4f 891 Gene3D G3DSA:2.60.40.10 235 343 7.4E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold XF_0846 56ebb3a1a88fa894bc0006fc23f1bf4f 891 SUPERFAMILY SSF49785 37 233 3.74E-47 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily XF_0846 56ebb3a1a88fa894bc0006fc23f1bf4f 891 SUPERFAMILY SSF51445 343 699 4.39E-105 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily XF_0846 56ebb3a1a88fa894bc0006fc23f1bf4f 891 SUPERFAMILY SSF49303 801 877 1.87E-15 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily XF_1617 5b7e4c1c513cd797c13ec3348e86651b 309 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 6.0E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XF_1617 5b7e4c1c513cd797c13ec3348e86651b 309 Gene3D G3DSA:3.40.50.150 134 302 4.4E-33 T 14-10-2018 XF_1617 5b7e4c1c513cd797c13ec3348e86651b 309 Pfam PF08241 Methyltransferase domain 152 245 3.3E-22 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 XF_1617 5b7e4c1c513cd797c13ec3348e86651b 309 SMART SM00418 8 88 4.2E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XF_1617 5b7e4c1c513cd797c13ec3348e86651b 309 Gene3D G3DSA:1.10.10.10 1 92 3.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1617 5b7e4c1c513cd797c13ec3348e86651b 309 SUPERFAMILY SSF53335 127 293 1.11E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_1617 5b7e4c1c513cd797c13ec3348e86651b 309 SUPERFAMILY SSF46785 1 80 4.85E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_1617 5b7e4c1c513cd797c13ec3348e86651b 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.0E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XF_1617 5b7e4c1c513cd797c13ec3348e86651b 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.0E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XF_1617 5b7e4c1c513cd797c13ec3348e86651b 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.0E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XF_0296 07a518a353cffc91a8a5e80f5bceb399 442 Pfam PF01420 Type I restriction modification DNA specificity domain 239 405 6.9E-19 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XF_0296 07a518a353cffc91a8a5e80f5bceb399 442 Gene3D G3DSA:3.90.220.20 42 420 6.6E-61 T 14-10-2018 XF_0296 07a518a353cffc91a8a5e80f5bceb399 442 Gene3D G3DSA:1.10.287.1120 165 417 6.6E-61 T 14-10-2018 XF_0296 07a518a353cffc91a8a5e80f5bceb399 442 Gene3D G3DSA:3.90.220.20 229 373 6.6E-61 T 14-10-2018 XF_0296 07a518a353cffc91a8a5e80f5bceb399 442 SUPERFAMILY SSF116734 40 212 3.6E-14 T 14-10-2018 XF_0296 07a518a353cffc91a8a5e80f5bceb399 442 SUPERFAMILY SSF116734 217 424 1.1E-46 T 14-10-2018 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 SUPERFAMILY SSF50249 595 701 1.25E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_0549 14d068d29bc3936c187e2684ebf43c50 702 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 23 34 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 SUPERFAMILY SSF52374 16 394 6.81E-88 T 14-10-2018 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 Hamap MF_00098 Methionine--tRNA ligase [metG]. 14 557 38.48 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 Gene3D G3DSA:3.40.50.620 17 389 4.1E-142 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0549 14d068d29bc3936c187e2684ebf43c50 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 98 109 3.0E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 261 272 3.0E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 18 31 3.0E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 50 64 3.0E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 300 315 3.0E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 394 405 3.0E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 Pfam PF09334 tRNA synthetases class I (M) 17 406 1.3E-148 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 Gene3D G3DSA:1.10.730.10 390 551 5.5E-31 T 14-10-2018 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 Gene3D G3DSA:2.20.28.20 150 184 4.1E-142 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 578 701 1.9E-37 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 SUPERFAMILY SSF57770 150 184 1.83E-12 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 Pfam PF01588 Putative tRNA binding domain 605 699 3.6E-20 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 SUPERFAMILY SSF47323 399 559 1.63E-39 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 Gene3D G3DSA:2.40.50.140 589 701 5.6E-29 T 14-10-2018 XF_0549 14d068d29bc3936c187e2684ebf43c50 702 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 17 547 7.5E-160 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XF_0237 0ceafd646e72a54830c56b18960d3113 302 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 220 1.7E-65 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_0237 0ceafd646e72a54830c56b18960d3113 302 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 300 17.288 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_0237 0ceafd646e72a54830c56b18960d3113 302 SUPERFAMILY SSF55120 11 223 6.62E-71 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_0237 0ceafd646e72a54830c56b18960d3113 302 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 245 300 4.8E-12 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_0237 0ceafd646e72a54830c56b18960d3113 302 Gene3D G3DSA:3.30.2350.10 4 239 5.5E-79 T 14-10-2018 XF_0237 0ceafd646e72a54830c56b18960d3113 302 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 181 8.9E-48 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 XF_0237 0ceafd646e72a54830c56b18960d3113 302 SUPERFAMILY SSF88697 244 301 3.68E-8 T 14-10-2018 IPR015947 PUA-like superfamily XF_0237 0ceafd646e72a54830c56b18960d3113 302 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 182 237 8.3E-16 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 XF_1623 a470f24835f9ec79f2e3c2ab2665db59 615 Gene3D G3DSA:3.90.550.10 113 345 8.5E-17 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_1623 a470f24835f9ec79f2e3c2ab2665db59 615 SUPERFAMILY SSF53448 118 404 1.55E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_1623 a470f24835f9ec79f2e3c2ab2665db59 615 Pfam PF13632 Glycosyl transferase family group 2 217 457 6.3E-16 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XF_1623 a470f24835f9ec79f2e3c2ab2665db59 615 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 1 615 45.174 T 14-10-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 XF_2179 2827a8c71f3b713ebacbb30b417c9513 222 SUPERFAMILY SSF52374 4 217 6.19E-44 T 14-10-2018 XF_2179 2827a8c71f3b713ebacbb30b417c9513 222 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 217 25.341 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XF_2179 2827a8c71f3b713ebacbb30b417c9513 222 Pfam PF01467 Cytidylyltransferase-like 7 191 7.3E-36 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XF_2179 2827a8c71f3b713ebacbb30b417c9513 222 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 63 2.2E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XF_2179 2827a8c71f3b713ebacbb30b417c9513 222 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 216 2.0E-57 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XF_2179 2827a8c71f3b713ebacbb30b417c9513 222 Gene3D G3DSA:3.40.50.620 5 221 1.5E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0851 f8dc32706f2e71dd97dda9367516d5c8 435 SUPERFAMILY SSF51905 1 416 2.98E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_0851 f8dc32706f2e71dd97dda9367516d5c8 435 Gene3D G3DSA:3.50.50.60 1 72 1.4E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_0851 f8dc32706f2e71dd97dda9367516d5c8 435 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 46.206 T 14-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 XF_0851 f8dc32706f2e71dd97dda9367516d5c8 435 SUPERFAMILY SSF54373 270 360 3.79E-16 T 14-10-2018 XF_0851 f8dc32706f2e71dd97dda9367516d5c8 435 Gene3D G3DSA:3.50.50.60 105 400 6.4E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_0851 f8dc32706f2e71dd97dda9367516d5c8 435 Pfam PF01266 FAD dependent oxidoreductase 3 398 1.6E-69 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 XF_0851 f8dc32706f2e71dd97dda9367516d5c8 435 Gene3D G3DSA:3.30.9.10 134 362 6.4E-51 T 14-10-2018 XF_1428 738d0b0e4616099c185cf51f69d2f2e6 454 Gene3D G3DSA:3.30.590.20 3 454 1.5E-177 T 14-10-2018 XF_1428 738d0b0e4616099c185cf51f69d2f2e6 454 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 56 358 9.0E-94 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 XF_1428 738d0b0e4616099c185cf51f69d2f2e6 454 SUPERFAMILY SSF55931 27 445 7.26E-67 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 XF_1428 738d0b0e4616099c185cf51f69d2f2e6 454 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 11 454 1.7E-210 T 14-10-2018 IPR011556 Glutamate--cysteine ligase, plant-type GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 XF_1428 738d0b0e4616099c185cf51f69d2f2e6 454 PIRSF PIRSF017901 2 454 3.8E-184 T 14-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 XF_0028 439f372c5a44aaf76f525f2d53083928 187 SUPERFAMILY SSF54523 15 140 8.63E-22 T 14-10-2018 XF_0028 439f372c5a44aaf76f525f2d53083928 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 35 8.1E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0028 439f372c5a44aaf76f525f2d53083928 187 Gene3D G3DSA:3.30.700.10 15 159 3.4E-13 T 14-10-2018 XF_0028 439f372c5a44aaf76f525f2d53083928 187 Pfam PF12019 Type II transport protein GspH 51 167 9.8E-19 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 XF_0236 313a3f61999b2d03dadc9c5eb3020c24 125 Gene3D G3DSA:3.30.300.20 3 105 8.9E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta XF_0236 313a3f61999b2d03dadc9c5eb3020c24 125 SUPERFAMILY SSF89919 4 112 6.41E-27 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily XF_0236 313a3f61999b2d03dadc9c5eb3020c24 125 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 7 110 25.894 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XF_0236 313a3f61999b2d03dadc9c5eb3020c24 125 Pfam PF02033 Ribosome-binding factor A 8 110 7.8E-27 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XF_0236 313a3f61999b2d03dadc9c5eb3020c24 125 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 XF_0236 313a3f61999b2d03dadc9c5eb3020c24 125 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 7 113 3.1E-25 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XF_0236 313a3f61999b2d03dadc9c5eb3020c24 125 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 97 1.0E-44 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 Gene3D G3DSA:3.40.1160.10 13 308 1.0E-91 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 Pfam PF00696 Amino acid kinase family 13 293 8.8E-46 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 Pfam PF13840 ACT domain 402 462 3.2E-7 T 14-10-2018 IPR027795 CASTOR, ACT domain XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 Pfam PF13840 ACT domain 321 382 1.8E-7 T 14-10-2018 IPR027795 CASTOR, ACT domain XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 Gene3D G3DSA:3.30.2130.10 311 468 1.2E-44 T 14-10-2018 XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 Gene3D G3DSA:3.40.50.720 475 821 7.8E-124 T 14-10-2018 XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 SUPERFAMILY SSF55021 314 388 6.41E-19 T 14-10-2018 XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 Gene3D G3DSA:3.30.360.10 633 803 7.8E-124 T 14-10-2018 XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 PIRSF PIRSF000727 13 825 0.0 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 SUPERFAMILY SSF53633 13 307 3.53E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 ProSitePatterns PS00324 Aspartokinase signature. 15 23 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 SUPERFAMILY SSF55021 395 483 4.89E-22 T 14-10-2018 XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 Pfam PF00742 Homoserine dehydrogenase 622 818 1.0E-50 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 SUPERFAMILY SSF51735 472 644 5.91E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 668 690 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 13 467 2.7E-108 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 SUPERFAMILY SSF55347 622 805 1.44E-48 T 14-10-2018 XF_2225 f9ca3650b8a59d161dcf02887febb1e7 828 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 480 614 1.7E-22 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 201 2.6E-76 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 Pfam PF00117 Glutamine amidotransferase class-I 12 197 3.7E-40 T 14-10-2018 IPR017926 Glutamine amidotransferase XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 Pfam PF00958 GMP synthase C terminal domain 430 521 6.6E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 Gene3D G3DSA:3.30.300.10 403 522 1.4E-50 T 14-10-2018 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 SUPERFAMILY SSF52317 9 205 7.37E-56 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 Gene3D G3DSA:3.40.50.620 207 402 3.4E-72 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 1.7E-5 T 14-10-2018 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 1.7E-5 T 14-10-2018 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 1.7E-5 T 14-10-2018 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 SUPERFAMILY SSF52402 191 443 7.06E-57 T 14-10-2018 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.6E-7 T 14-10-2018 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 1.6E-7 T 14-10-2018 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.6E-7 T 14-10-2018 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 522 55.009 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 SUPERFAMILY SSF54810 402 522 2.48E-49 T 14-10-2018 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 522 1.7E-145 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 Pfam PF02540 NAD synthase 211 291 7.1E-9 T 14-10-2018 IPR022310 NAD/GMP synthase XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.9E-6 T 14-10-2018 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00097 Anthranilate synthase component II signature 174 187 1.9E-6 T 14-10-2018 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.9E-6 T 14-10-2018 XF_2429 b7a63836665432f6c1f6a6d850c4fd76 522 Gene3D G3DSA:3.40.50.880 6 206 2.0E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_1463 7823963892ab963e38f919fbbb96c71c 327 Pfam PF13377 Periplasmic binding protein-like domain 144 310 9.2E-36 T 14-10-2018 XF_1463 7823963892ab963e38f919fbbb96c71c 327 Gene3D G3DSA:3.40.50.2300 28 282 1.9E-64 T 14-10-2018 XF_1463 7823963892ab963e38f919fbbb96c71c 327 Gene3D G3DSA:3.40.50.2300 136 265 1.9E-64 T 14-10-2018 XF_1463 7823963892ab963e38f919fbbb96c71c 327 Gene3D G3DSA:1.10.260.40 1 27 3.3E-6 T 14-10-2018 XF_1463 7823963892ab963e38f919fbbb96c71c 327 SUPERFAMILY SSF53822 35 312 3.34E-62 T 14-10-2018 IPR028082 Periplasmic binding protein-like I XF_0913 ce578aa62d10269952f7ba119bea50e1 261 Gene3D G3DSA:3.40.50.720 2 259 8.9E-80 T 14-10-2018 XF_0913 ce578aa62d10269952f7ba119bea50e1 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XF_0913 ce578aa62d10269952f7ba119bea50e1 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 256 3.4E-60 T 14-10-2018 XF_0913 ce578aa62d10269952f7ba119bea50e1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 2.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0913 ce578aa62d10269952f7ba119bea50e1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0913 ce578aa62d10269952f7ba119bea50e1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 2.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0913 ce578aa62d10269952f7ba119bea50e1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 2.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0913 ce578aa62d10269952f7ba119bea50e1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 2.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0913 ce578aa62d10269952f7ba119bea50e1 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 2.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0913 ce578aa62d10269952f7ba119bea50e1 261 SUPERFAMILY SSF51735 12 258 9.56E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0913 ce578aa62d10269952f7ba119bea50e1 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 1.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0913 ce578aa62d10269952f7ba119bea50e1 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 1.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0913 ce578aa62d10269952f7ba119bea50e1 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 1.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0422 513d1b8f28104fe2e7d68b3b0a517b23 1121 Gene3D G3DSA:1.10.10.160 88 182 2.8E-55 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily XF_0422 513d1b8f28104fe2e7d68b3b0a517b23 1121 Gene3D G3DSA:3.40.50.300 319 789 8.9E-126 T 14-10-2018 XF_0422 513d1b8f28104fe2e7d68b3b0a517b23 1121 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 10 789 2.9E-219 T 14-10-2018 XF_0422 513d1b8f28104fe2e7d68b3b0a517b23 1121 PIRSF PIRSF000980 9 1112 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 XF_0422 513d1b8f28104fe2e7d68b3b0a517b23 1121 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 9 1111 15.927 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 XF_0422 513d1b8f28104fe2e7d68b3b0a517b23 1121 SUPERFAMILY SSF52540 345 795 1.44E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0422 513d1b8f28104fe2e7d68b3b0a517b23 1121 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 10 1071 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 XF_0422 513d1b8f28104fe2e7d68b3b0a517b23 1121 SUPERFAMILY SSF52980 805 1103 3.43E-51 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XF_0422 513d1b8f28104fe2e7d68b3b0a517b23 1121 Gene3D G3DSA:1.10.486.10 439 650 8.9E-126 T 14-10-2018 XF_0422 513d1b8f28104fe2e7d68b3b0a517b23 1121 Gene3D G3DSA:3.40.50.10930 12 284 2.8E-55 T 14-10-2018 XF_0422 513d1b8f28104fe2e7d68b3b0a517b23 1121 SUPERFAMILY SSF52540 10 331 3.72E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2160 05d6ce155097894616775642047147c1 258 PIRSF PIRSF005457 1 252 1.5E-85 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XF_2160 05d6ce155097894616775642047147c1 258 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 2.2E-95 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XF_2160 05d6ce155097894616775642047147c1 258 SUPERFAMILY SSF56281 1 253 3.68E-67 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XF_2160 05d6ce155097894616775642047147c1 258 Gene3D G3DSA:3.60.15.10 1 252 1.7E-85 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XF_2160 05d6ce155097894616775642047147c1 258 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 165 252 6.6E-26 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XF_2160 05d6ce155097894616775642047147c1 258 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 252 40.363 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XF_2160 05d6ce155097894616775642047147c1 258 SMART SM00849 12 164 1.7E-34 T 14-10-2018 IPR001279 Metallo-beta-lactamase XF_2160 05d6ce155097894616775642047147c1 258 Pfam PF00753 Metallo-beta-lactamase superfamily 15 164 1.0E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase XF_2154 46311424260c09d38912380e4cb40a5a 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 82 314 3.3E-43 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 XF_2154 46311424260c09d38912380e4cb40a5a 350 SUPERFAMILY SSF53756 8 343 2.2E-73 T 14-10-2018 XF_2154 46311424260c09d38912380e4cb40a5a 350 Gene3D G3DSA:3.40.50.2000 3 154 9.5E-20 T 14-10-2018 XF_2154 46311424260c09d38912380e4cb40a5a 350 Gene3D G3DSA:3.40.50.2000 160 342 1.8E-35 T 14-10-2018 XF_1050 f73912eb903d479ab987a15866c42ea7 255 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 12 239 5.2E-84 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 XF_1050 f73912eb903d479ab987a15866c42ea7 255 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 239 8.7E-79 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 XF_1050 f73912eb903d479ab987a15866c42ea7 255 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 240 39.292 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 XF_1050 f73912eb903d479ab987a15866c42ea7 255 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 185 202 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 XF_1050 f73912eb903d479ab987a15866c42ea7 255 SUPERFAMILY SSF64005 11 235 2.75E-85 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 XF_1050 f73912eb903d479ab987a15866c42ea7 255 Gene3D G3DSA:3.40.1180.10 2 234 6.8E-91 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 XF_1354 0e909d2b3c3ae32e0fef32de630808fe 145 Pfam PF01047 MarR family 38 92 8.6E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_1354 0e909d2b3c3ae32e0fef32de630808fe 145 SMART SM00347 28 128 2.6E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_1354 0e909d2b3c3ae32e0fef32de630808fe 145 SUPERFAMILY SSF46785 10 143 8.37E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_1354 0e909d2b3c3ae32e0fef32de630808fe 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 6.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_1354 0e909d2b3c3ae32e0fef32de630808fe 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 6.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_1354 0e909d2b3c3ae32e0fef32de630808fe 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 6.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_1354 0e909d2b3c3ae32e0fef32de630808fe 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 6.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_1354 0e909d2b3c3ae32e0fef32de630808fe 145 Gene3D G3DSA:1.10.10.10 2 143 1.9E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_2200 098e98fbc9a805a2501b057596b00a9e 130 Pfam PF04591 Protein of unknown function, DUF596 56 124 1.2E-23 T 14-10-2018 IPR007670 Protein of unknown function DUF596 XF_2200 098e98fbc9a805a2501b057596b00a9e 130 SUPERFAMILY SSF160472 1 117 1.09E-33 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_2200 098e98fbc9a805a2501b057596b00a9e 130 Gene3D G3DSA:1.10.3510.10 4 123 8.3E-14 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_0868 78f59e7e1db1f5d02388552347d30f82 603 SUPERFAMILY SSF51905 119 458 1.49E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_0868 78f59e7e1db1f5d02388552347d30f82 603 SUPERFAMILY SSF55424 471 592 3.09E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 Pfam PF00364 Biotin-requiring enzyme 5 75 1.8E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment XF_0868 78f59e7e1db1f5d02388552347d30f82 603 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 123 449 7.0E-69 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 123 585 1.5E-153 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 311 6.1E-39 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 124 143 6.1E-39 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 272 6.1E-39 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 414 436 6.1E-39 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 385 401 6.1E-39 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 Gene3D G3DSA:3.50.50.60 124 454 3.7E-119 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 293 318 1.0E-70 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 266 1.0E-70 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 534 549 1.0E-70 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 556 576 1.0E-70 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 123 145 1.0E-70 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 469 490 1.0E-70 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 171 1.0E-70 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 386 400 1.0E-70 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 436 1.0E-70 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 Gene3D G3DSA:2.40.50.100 2 81 4.3E-18 T 14-10-2018 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 473 580 1.9E-34 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 Gene3D G3DSA:3.50.50.60 269 395 3.7E-119 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_0868 78f59e7e1db1f5d02388552347d30f82 603 SUPERFAMILY SSF51230 2 92 6.28E-21 T 14-10-2018 IPR011053 Single hybrid motif XF_0868 78f59e7e1db1f5d02388552347d30f82 603 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 PIRSF PIRSF000350 76 594 5.9E-86 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 157 167 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 XF_0868 78f59e7e1db1f5d02388552347d30f82 603 Gene3D G3DSA:3.30.390.30 472 593 2.0E-42 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XF_0919 d22c79dad3d0980598128a148d7e0541 187 Gene3D G3DSA:3.90.870.10 2 186 8.9E-52 T 14-10-2018 XF_0919 d22c79dad3d0980598128a148d7e0541 187 SUPERFAMILY SSF55821 7 185 4.58E-49 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XF_0919 d22c79dad3d0980598128a148d7e0541 187 Pfam PF01300 Telomere recombination 13 185 1.1E-39 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 XF_0919 d22c79dad3d0980598128a148d7e0541 187 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 186 38.056 T 14-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 XF_0301 2e708cd749675de52d8a0aaa39786293 100 Gene3D G3DSA:2.40.30.170 77 97 3.1E-11 T 14-10-2018 XF_0301 2e708cd749675de52d8a0aaa39786293 100 SUPERFAMILY SSF111369 6 91 3.4E-7 T 14-10-2018 XF_0301 2e708cd749675de52d8a0aaa39786293 100 Gene3D G3DSA:2.40.50.100 34 75 3.1E-11 T 14-10-2018 XF_0301 2e708cd749675de52d8a0aaa39786293 100 Gene3D G3DSA:1.10.287.470 5 33 3.1E-11 T 14-10-2018 XF_2778 2f716d1a4b61a348f6203c35b44409fd 451 Gene3D G3DSA:3.30.1360.120 1 125 5.2E-40 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 XF_2778 2f716d1a4b61a348f6203c35b44409fd 451 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 451 4.7E-96 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 XF_2778 2f716d1a4b61a348f6203c35b44409fd 451 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 451 31.183 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 XF_2778 2f716d1a4b61a348f6203c35b44409fd 451 Gene3D G3DSA:3.40.50.300 221 380 2.6E-94 T 14-10-2018 XF_2778 2f716d1a4b61a348f6203c35b44409fd 451 SUPERFAMILY SSF116878 125 451 2.48E-43 T 14-10-2018 XF_2778 2f716d1a4b61a348f6203c35b44409fd 451 Pfam PF12631 MnmE helical domain 127 448 2.4E-51 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 XF_2778 2f716d1a4b61a348f6203c35b44409fd 451 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 124 4.4E-36 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 XF_2778 2f716d1a4b61a348f6203c35b44409fd 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 290 308 3.4E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2778 2f716d1a4b61a348f6203c35b44409fd 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 223 243 3.4E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2778 2f716d1a4b61a348f6203c35b44409fd 451 Gene3D G3DSA:1.20.120.430 126 451 2.6E-94 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 XF_2778 2f716d1a4b61a348f6203c35b44409fd 451 Pfam PF01926 50S ribosome-binding GTPase 224 312 1.2E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2778 2f716d1a4b61a348f6203c35b44409fd 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 224 349 4.3E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XF_2778 2f716d1a4b61a348f6203c35b44409fd 451 SUPERFAMILY SSF52540 76 367 4.94E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0405 61b62e63647898c5e7f6ee5c8c4a6283 128 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 9 128 35.265 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 XF_0405 61b62e63647898c5e7f6ee5c8c4a6283 128 Gene3D G3DSA:2.60.300.12 22 128 7.7E-35 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XF_0405 61b62e63647898c5e7f6ee5c8c4a6283 128 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 24 128 1.1E-37 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 XF_0405 61b62e63647898c5e7f6ee5c8c4a6283 128 SUPERFAMILY SSF89360 23 117 1.04E-29 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XF_0405 61b62e63647898c5e7f6ee5c8c4a6283 128 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 109 126 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 XF_0405 61b62e63647898c5e7f6ee5c8c4a6283 128 Pfam PF01521 Iron-sulphur cluster biosynthesis 23 123 2.7E-19 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 XF_1314 1a35debae49553a9dbb5d125026a4d23 347 Gene3D G3DSA:3.40.1780.10 15 339 5.3E-113 T 14-10-2018 XF_1314 1a35debae49553a9dbb5d125026a4d23 347 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 2 340 46.319 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XF_1314 1a35debae49553a9dbb5d125026a4d23 347 Gene3D G3DSA:2.40.10.240 65 162 5.3E-113 T 14-10-2018 XF_1314 1a35debae49553a9dbb5d125026a4d23 347 SUPERFAMILY SSF111337 5 340 2.75E-130 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XF_1314 1a35debae49553a9dbb5d125026a4d23 347 Pfam PF02547 Queuosine biosynthesis protein 5 339 2.0E-127 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XF_1314 1a35debae49553a9dbb5d125026a4d23 347 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 339 1.5E-126 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XF_2557 9f219ac4328efe88a6f7f9242ad70608 243 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 39 225 3.3E-68 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 XF_2557 9f219ac4328efe88a6f7f9242ad70608 243 Gene3D G3DSA:3.30.1400.10 94 232 3.7E-38 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 XF_2557 9f219ac4328efe88a6f7f9242ad70608 243 SMART SM00771 95 225 1.9E-59 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 XF_2557 9f219ac4328efe88a6f7f9242ad70608 243 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 98 226 8.0E-71 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 XF_2557 9f219ac4328efe88a6f7f9242ad70608 243 Hamap MF_00509 Cell division protein ZipA [zipA]. 5 227 17.665 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 XF_2557 9f219ac4328efe88a6f7f9242ad70608 243 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 98 223 3.1E-36 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 XF_2557 9f219ac4328efe88a6f7f9242ad70608 243 SUPERFAMILY SSF64383 95 231 1.44E-34 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 XF_1446 042131f8415478c655e915884b451c95 243 Gene3D G3DSA:3.40.630.70 65 238 6.2E-58 T 14-10-2018 XF_1446 042131f8415478c655e915884b451c95 243 Gene3D G3DSA:2.30.210.20 8 64 9.3E-25 T 14-10-2018 XF_1446 042131f8415478c655e915884b451c95 243 SUPERFAMILY SSF55729 10 231 2.81E-85 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase XF_1446 042131f8415478c655e915884b451c95 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 222 2.0E-55 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 XF_1446 042131f8415478c655e915884b451c95 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 38 208 2.9E-67 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 XF_1446 042131f8415478c655e915884b451c95 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 89.513 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 XF_2643 1f849b7e633c16e021c9876756fde82c 208 Gene3D G3DSA:2.170.120.20 99 195 4.6E-26 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal XF_2643 1f849b7e633c16e021c9876756fde82c 208 Pfam PF01386 Ribosomal L25p family 6 94 6.4E-27 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 XF_2643 1f849b7e633c16e021c9876756fde82c 208 SUPERFAMILY SSF50715 4 195 2.62E-54 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XF_2643 1f849b7e633c16e021c9876756fde82c 208 Gene3D G3DSA:2.40.240.10 2 97 3.4E-32 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XF_2643 1f849b7e633c16e021c9876756fde82c 208 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 178 4.2E-38 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 XF_2643 1f849b7e633c16e021c9876756fde82c 208 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 188 30.133 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 XF_2643 1f849b7e633c16e021c9876756fde82c 208 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 4 97 23.18 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 XF_2643 1f849b7e633c16e021c9876756fde82c 208 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 186 3.8E-25 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain XF_2643 1f849b7e633c16e021c9876756fde82c 208 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 97 9.0E-50 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 XF_2221 10833ca31506d2050efea4337e4d0186 112 Gene3D G3DSA:1.10.1270.10 8 105 4.3E-29 T 14-10-2018 IPR038116 TrpR-like superfamily XF_2221 10833ca31506d2050efea4337e4d0186 112 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 16 98 2.3E-17 T 14-10-2018 IPR013368 TrpR homologue YerC/YecD XF_2221 10833ca31506d2050efea4337e4d0186 112 PIRSF PIRSF012508 4 106 2.3E-33 T 14-10-2018 IPR013368 TrpR homologue YerC/YecD XF_2221 10833ca31506d2050efea4337e4d0186 112 SUPERFAMILY SSF48295 15 99 6.8E-24 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XF_2221 10833ca31506d2050efea4337e4d0186 112 Pfam PF01371 Trp repressor protein 16 100 9.8E-29 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 XF_1920 fdb6d6084bb91917610fa5956e407eef 92 SUPERFAMILY SSF48295 4 88 1.1E-19 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XF_1920 fdb6d6084bb91917610fa5956e407eef 92 PIRSF PIRSF003196 1 92 1.7E-30 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XF_1920 fdb6d6084bb91917610fa5956e407eef 92 Pfam PF01371 Trp repressor protein 5 89 3.7E-27 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 XF_1920 fdb6d6084bb91917610fa5956e407eef 92 TIGRFAM TIGR01321 TrpR: trp operon repressor 2 90 2.2E-39 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XF_1920 fdb6d6084bb91917610fa5956e407eef 92 Gene3D G3DSA:1.10.1270.10 1 91 1.6E-23 T 14-10-2018 IPR038116 TrpR-like superfamily XF_1920 fdb6d6084bb91917610fa5956e407eef 92 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 7 86 2.0E-6 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XF_1920 fdb6d6084bb91917610fa5956e407eef 92 Hamap MF_00475 Trp operon repressor [trpR]. 3 92 15.924 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XF_1188 44530429dec77dac2ddf6cf3e56012a2 426 Pfam PF06689 ClpX C4-type zinc finger 16 53 3.4E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 XF_1188 44530429dec77dac2ddf6cf3e56012a2 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 7 417 53.164 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 XF_1188 44530429dec77dac2ddf6cf3e56012a2 426 SMART SM00382 113 265 1.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1188 44530429dec77dac2ddf6cf3e56012a2 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 1.3E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal XF_1188 44530429dec77dac2ddf6cf3e56012a2 426 Gene3D G3DSA:3.30.50.30 6 55 1.6E-24 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily XF_1188 44530429dec77dac2ddf6cf3e56012a2 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 14 414 7.6E-204 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 XF_1188 44530429dec77dac2ddf6cf3e56012a2 426 Gene3D G3DSA:3.40.50.300 59 317 8.3E-109 T 14-10-2018 XF_1188 44530429dec77dac2ddf6cf3e56012a2 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 3.3E-49 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XF_1188 44530429dec77dac2ddf6cf3e56012a2 426 Gene3D G3DSA:1.10.8.60 318 426 4.2E-40 T 14-10-2018 XF_1188 44530429dec77dac2ddf6cf3e56012a2 426 SUPERFAMILY SSF52540 64 406 2.2E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1188 44530429dec77dac2ddf6cf3e56012a2 426 SMART SM01086 319 414 8.0E-31 T 14-10-2018 IPR019489 Clp ATPase, C-terminal XF_1188 44530429dec77dac2ddf6cf3e56012a2 426 SUPERFAMILY SSF57716 16 51 1.28E-11 T 14-10-2018 XF_1188 44530429dec77dac2ddf6cf3e56012a2 426 SMART SM00994 15 54 9.8E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 XF_0960 9cc8727e794411341e917209aed7cb1f 247 SMART SM00670 6 145 1.2E-12 T 14-10-2018 IPR002716 PIN domain XF_0960 9cc8727e794411341e917209aed7cb1f 247 Pfam PF13638 PIN domain 8 158 8.6E-39 T 14-10-2018 IPR002716 PIN domain XF_0960 9cc8727e794411341e917209aed7cb1f 247 SUPERFAMILY SSF88723 7 159 2.11E-12 T 14-10-2018 IPR029060 PIN-like domain superfamily XF_0960 9cc8727e794411341e917209aed7cb1f 247 Gene3D G3DSA:3.40.50.1010 3 161 2.2E-25 T 14-10-2018 XF_0116 4265e0de84e06dd6662f078b09bcfa00 377 SUPERFAMILY SSF55031 179 286 2.09E-27 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain XF_0116 4265e0de84e06dd6662f078b09bcfa00 377 Gene3D G3DSA:3.30.70.360 179 292 1.4E-123 T 14-10-2018 XF_0116 4265e0de84e06dd6662f078b09bcfa00 377 SUPERFAMILY SSF53187 2 374 9.95E-64 T 14-10-2018 XF_0116 4265e0de84e06dd6662f078b09bcfa00 377 Gene3D G3DSA:3.40.630.10 7 362 1.4E-123 T 14-10-2018 XF_0116 4265e0de84e06dd6662f078b09bcfa00 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 49.409 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 XF_0116 4265e0de84e06dd6662f078b09bcfa00 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 135 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 XF_0116 4265e0de84e06dd6662f078b09bcfa00 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 2.8E-175 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 XF_0116 4265e0de84e06dd6662f078b09bcfa00 377 Pfam PF07687 Peptidase dimerisation domain 175 282 1.9E-24 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain XF_0116 4265e0de84e06dd6662f078b09bcfa00 377 Pfam PF01546 Peptidase family M20/M25/M40 63 371 2.8E-40 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 XF_0390 920324617f21dcabb64a2179e70a4915 482 SMART SM00387 369 482 3.6E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_0390 920324617f21dcabb64a2179e70a4915 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 480 1.6E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_0390 920324617f21dcabb64a2179e70a4915 482 Gene3D G3DSA:3.30.565.10 334 480 3.5E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0390 920324617f21dcabb64a2179e70a4915 482 Gene3D G3DSA:1.10.287.130 219 324 5.2E-11 T 14-10-2018 XF_0390 920324617f21dcabb64a2179e70a4915 482 SUPERFAMILY SSF55874 318 479 2.23E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0390 920324617f21dcabb64a2179e70a4915 482 SUPERFAMILY SSF47384 250 315 4.32E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XF_0390 920324617f21dcabb64a2179e70a4915 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 2.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_0390 920324617f21dcabb64a2179e70a4915 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 2.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_0390 920324617f21dcabb64a2179e70a4915 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 2.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_0454 96e2545371244eb836c6353add75d5f2 88 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 31 86 1.2E-14 T 14-10-2018 IPR019201 Protein of unknown function DUF2065 XF_0240 dd8c7c30fd607c74ebc54704d675999f 142 Gene3D G3DSA:1.10.10.10 15 132 3.4E-43 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_0240 dd8c7c30fd607c74ebc54704d675999f 142 Pfam PF01638 HxlR-like helix-turn-helix 33 120 2.1E-28 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type XF_0240 dd8c7c30fd607c74ebc54704d675999f 142 SUPERFAMILY SSF46785 19 136 1.19E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_0640 40a564abcb43771ce5b5d59677518d03 283 Pfam PF12183 Restriction endonuclease NotI 6 253 8.0E-55 T 14-10-2018 IPR022009 Restriction endonuclease, type II, NotI XF_2347 262882e385cb6ca0b06a91bc7dd42771 146 SUPERFAMILY SSF55961 1 139 3.05E-24 T 14-10-2018 XF_2347 262882e385cb6ca0b06a91bc7dd42771 146 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 134 1.4E-25 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 XF_2347 262882e385cb6ca0b06a91bc7dd42771 146 Gene3D G3DSA:3.30.530.20 5 141 3.4E-23 T 14-10-2018 IPR023393 START-like domain superfamily XF_1078 2dea79428a9f8105e297717012fedf60 836 SMART SM00849 568 753 4.3E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase XF_1078 2dea79428a9f8105e297717012fedf60 836 Pfam PF00753 Metallo-beta-lactamase superfamily 565 729 3.8E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase XF_1078 2dea79428a9f8105e297717012fedf60 836 Pfam PF03772 Competence protein 264 531 9.4E-66 T 14-10-2018 IPR004477 ComEC/Rec2-related protein XF_1078 2dea79428a9f8105e297717012fedf60 836 Gene3D G3DSA:3.60.15.10 557 792 1.7E-50 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XF_1078 2dea79428a9f8105e297717012fedf60 836 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 286 462 4.5E-25 T 14-10-2018 IPR004477 ComEC/Rec2-related protein XF_1078 2dea79428a9f8105e297717012fedf60 836 Pfam PF13567 Domain of unknown function (DUF4131) 69 227 8.6E-24 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 XF_1078 2dea79428a9f8105e297717012fedf60 836 SUPERFAMILY SSF56281 556 792 1.83E-45 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XF_1078 2dea79428a9f8105e297717012fedf60 836 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 179 781 8.5E-106 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 XF_2450 1c0d51b30d62a639e53129a4668bd5ec 96 PIRSF PIRSF003113 4 96 7.9E-22 T 14-10-2018 IPR002634 BolA protein XF_2450 1c0d51b30d62a639e53129a4668bd5ec 96 SUPERFAMILY SSF82657 10 91 1.96E-21 T 14-10-2018 IPR036065 BolA-like superfamily XF_2450 1c0d51b30d62a639e53129a4668bd5ec 96 Pfam PF01722 BolA-like protein 18 89 1.2E-24 T 14-10-2018 IPR002634 BolA protein XF_2450 1c0d51b30d62a639e53129a4668bd5ec 96 Gene3D G3DSA:3.30.300.90 7 95 1.2E-24 T 14-10-2018 XF_2770 4ebd8ca1bcb5c28781cce2411b8761bb 132 SUPERFAMILY SSF160472 2 124 3.27E-40 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_2770 4ebd8ca1bcb5c28781cce2411b8761bb 132 Pfam PF04591 Protein of unknown function, DUF596 61 123 7.8E-26 T 14-10-2018 IPR007670 Protein of unknown function DUF596 XF_2770 4ebd8ca1bcb5c28781cce2411b8761bb 132 Gene3D G3DSA:1.10.3510.10 3 131 4.6E-16 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_2418 0a497da1dd652f4800defa894ca4074a 943 SUPERFAMILY SSF47323 668 934 8.6E-69 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2418 0a497da1dd652f4800defa894ca4074a 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 16 858 3.2E-264 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XF_2418 0a497da1dd652f4800defa894ca4074a 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 657 4.9E-194 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2418 0a497da1dd652f4800defa894ca4074a 943 Pfam PF08264 Anticodon-binding domain of tRNA 701 857 4.1E-24 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 XF_2418 0a497da1dd652f4800defa894ca4074a 943 SUPERFAMILY SSF52374 5 663 6.86E-133 T 14-10-2018 XF_2418 0a497da1dd652f4800defa894ca4074a 943 Gene3D G3DSA:1.10.730.20 656 934 3.9E-84 T 14-10-2018 XF_2418 0a497da1dd652f4800defa894ca4074a 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 544 557 3.2E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XF_2418 0a497da1dd652f4800defa894ca4074a 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 419 434 3.2E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XF_2418 0a497da1dd652f4800defa894ca4074a 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 577 586 3.2E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XF_2418 0a497da1dd652f4800defa894ca4074a 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 3.2E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XF_2418 0a497da1dd652f4800defa894ca4074a 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 3.2E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 XF_2418 0a497da1dd652f4800defa894ca4074a 943 Pfam PF06827 Zinc finger found in FPG and IleRS 905 931 4.1E-7 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 XF_2418 0a497da1dd652f4800defa894ca4074a 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2418 0a497da1dd652f4800defa894ca4074a 943 Gene3D G3DSA:3.40.50.620 26 645 1.8E-217 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_2418 0a497da1dd652f4800defa894ca4074a 943 Gene3D G3DSA:3.90.740.10 196 426 1.8E-217 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XF_2418 0a497da1dd652f4800defa894ca4074a 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 934 20.975 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 XF_2418 0a497da1dd652f4800defa894ca4074a 943 SUPERFAMILY SSF50677 205 421 4.19E-40 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XF_1105 872470bd96123b19cd3309fbdbcf3403 237 PIRSF PIRSF000161 3 237 9.6E-62 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XF_1105 872470bd96123b19cd3309fbdbcf3403 237 SUPERFAMILY SSF55347 121 208 1.77E-20 T 14-10-2018 XF_1105 872470bd96123b19cd3309fbdbcf3403 237 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 168 2.4E-36 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XF_1105 872470bd96123b19cd3309fbdbcf3403 237 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 122 235 1.1E-27 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XF_1105 872470bd96123b19cd3309fbdbcf3403 237 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 237 27.636 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XF_1105 872470bd96123b19cd3309fbdbcf3403 237 SUPERFAMILY SSF51735 4 236 1.18E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1105 872470bd96123b19cd3309fbdbcf3403 237 Gene3D G3DSA:3.30.360.10 121 206 5.2E-58 T 14-10-2018 XF_1105 872470bd96123b19cd3309fbdbcf3403 237 Gene3D G3DSA:3.40.50.720 6 234 5.2E-58 T 14-10-2018 XF_1105 872470bd96123b19cd3309fbdbcf3403 237 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 119 1.1E-22 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XF_1105 872470bd96123b19cd3309fbdbcf3403 237 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 143 160 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XF_1947 dcdd15380826b8916978d856a0a7d4a8 322 SUPERFAMILY SSF110997 244 316 1.7E-13 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XF_1947 dcdd15380826b8916978d856a0a7d4a8 322 Gene3D G3DSA:3.30.70.1070 247 318 2.6E-10 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XF_1947 dcdd15380826b8916978d856a0a7d4a8 322 Pfam PF05036 Sporulation related domain 101 165 5.1E-11 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 XF_1947 dcdd15380826b8916978d856a0a7d4a8 322 Pfam PF05036 Sporulation related domain 247 311 4.5E-14 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 XF_1947 dcdd15380826b8916978d856a0a7d4a8 322 SUPERFAMILY SSF110997 103 164 6.15E-7 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XF_0670 681cc15536af261cba0d2b415d9c5ca3 317 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 12 311 5.9E-34 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain XF_0670 681cc15536af261cba0d2b415d9c5ca3 317 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 8 296 2.0E-93 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 XF_0670 681cc15536af261cba0d2b415d9c5ca3 317 Gene3D G3DSA:3.30.70.250 130 202 2.2E-93 T 14-10-2018 XF_0670 681cc15536af261cba0d2b415d9c5ca3 317 Gene3D G3DSA:3.40.366.10 11 291 2.2E-93 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 XF_0670 681cc15536af261cba0d2b415d9c5ca3 317 Pfam PF00698 Acyl transferase domain 11 282 9.2E-39 T 14-10-2018 IPR014043 Acyl transferase XF_0670 681cc15536af261cba0d2b415d9c5ca3 317 SUPERFAMILY SSF55048 135 202 1.7E-14 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding XF_0670 681cc15536af261cba0d2b415d9c5ca3 317 PIRSF PIRSF000446 6 314 5.9E-96 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 XF_0670 681cc15536af261cba0d2b415d9c5ca3 317 SUPERFAMILY SSF52151 9 312 1.67E-71 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XF_1408 f5cabc982f42a292da5f761670e0cb91 462 Pfam PF04963 Sigma-54 factor, core binding domain 96 289 4.6E-46 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 XF_1408 f5cabc982f42a292da5f761670e0cb91 462 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 50 1.2E-15 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XF_1408 f5cabc982f42a292da5f761670e0cb91 462 Gene3D G3DSA:1.10.10.60 401 459 9.8E-22 T 14-10-2018 XF_1408 f5cabc982f42a292da5f761670e0cb91 462 Pfam PF04552 Sigma-54, DNA binding domain 302 460 5.5E-64 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding XF_1408 f5cabc982f42a292da5f761670e0cb91 462 PIRSF PIRSF000774 1 462 5.9E-132 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XF_1408 f5cabc982f42a292da5f761670e0cb91 462 Gene3D G3DSA:1.10.10.1330 101 211 1.0E-17 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily XF_1408 f5cabc982f42a292da5f761670e0cb91 462 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 440 447 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XF_1408 f5cabc982f42a292da5f761670e0cb91 462 PRINTS PR00045 Sigma-54 factor signature 435 453 1.9E-25 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XF_1408 f5cabc982f42a292da5f761670e0cb91 462 PRINTS PR00045 Sigma-54 factor signature 170 187 1.9E-25 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XF_1408 f5cabc982f42a292da5f761670e0cb91 462 PRINTS PR00045 Sigma-54 factor signature 361 373 1.9E-25 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XF_1408 f5cabc982f42a292da5f761670e0cb91 462 PRINTS PR00045 Sigma-54 factor signature 377 388 1.9E-25 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XF_1408 f5cabc982f42a292da5f761670e0cb91 462 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 349 368 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XF_1408 f5cabc982f42a292da5f761670e0cb91 462 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 12 458 4.1E-137 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XF_1479 96f329aa96fe85fe2f353e0fda0186b9 763 Gene3D G3DSA:2.130.10.120 142 489 3.0E-249 T 14-10-2018 XF_1479 96f329aa96fe85fe2f353e0fda0186b9 763 SUPERFAMILY SSF50993 70 492 1.96E-75 T 14-10-2018 XF_1479 96f329aa96fe85fe2f353e0fda0186b9 763 Pfam PF00326 Prolyl oligopeptidase family 547 761 1.5E-66 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 XF_1479 96f329aa96fe85fe2f353e0fda0186b9 763 Gene3D G3DSA:3.40.50.1820 91 756 3.0E-249 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1479 96f329aa96fe85fe2f353e0fda0186b9 763 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 72 488 6.9E-105 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 XF_1479 96f329aa96fe85fe2f353e0fda0186b9 763 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 548 3.6E-45 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XF_1479 96f329aa96fe85fe2f353e0fda0186b9 763 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 690 712 3.6E-45 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XF_1479 96f329aa96fe85fe2f353e0fda0186b9 763 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 672 687 3.6E-45 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XF_1479 96f329aa96fe85fe2f353e0fda0186b9 763 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 584 603 3.6E-45 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XF_1479 96f329aa96fe85fe2f353e0fda0186b9 763 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 556 580 3.6E-45 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XF_1479 96f329aa96fe85fe2f353e0fda0186b9 763 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 614 634 3.6E-45 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XF_1479 96f329aa96fe85fe2f353e0fda0186b9 763 SUPERFAMILY SSF53474 498 760 1.2E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1503 7c9da21960f9f68cd596e04b0621bd9a 204 SUPERFAMILY SSF52540 2 188 8.46E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1503 7c9da21960f9f68cd596e04b0621bd9a 204 Gene3D G3DSA:3.40.50.300 7 180 1.5E-63 T 14-10-2018 XF_1503 7c9da21960f9f68cd596e04b0621bd9a 204 Gene3D G3DSA:3.30.63.10 34 93 1.5E-63 T 14-10-2018 XF_1503 7c9da21960f9f68cd596e04b0621bd9a 204 SMART SM00072 2 184 2.9E-59 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit XF_1503 7c9da21960f9f68cd596e04b0621bd9a 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 9.0E-72 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 XF_1503 7c9da21960f9f68cd596e04b0621bd9a 204 Pfam PF00625 Guanylate kinase 4 181 1.4E-46 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit XF_1503 7c9da21960f9f68cd596e04b0621bd9a 204 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 35.158 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 XF_1503 7c9da21960f9f68cd596e04b0621bd9a 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 XF_0801 b6620d073732127311c5fc2d5692959a 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 411 30.25 T 14-10-2018 IPR020823 Cell division protein FtsA XF_0801 b6620d073732127311c5fc2d5692959a 411 SUPERFAMILY SSF53067 200 378 3.04E-44 T 14-10-2018 XF_0801 b6620d073732127311c5fc2d5692959a 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 1.4E-158 T 14-10-2018 IPR020823 Cell division protein FtsA XF_0801 b6620d073732127311c5fc2d5692959a 411 Gene3D G3DSA:3.30.1490.110 87 170 7.2E-119 T 14-10-2018 XF_0801 b6620d073732127311c5fc2d5692959a 411 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.6E-28 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 XF_0801 b6620d073732127311c5fc2d5692959a 411 SMART SM00842 10 197 1.1E-97 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 XF_0801 b6620d073732127311c5fc2d5692959a 411 Gene3D G3DSA:3.30.420.40 13 360 7.2E-119 T 14-10-2018 XF_0801 b6620d073732127311c5fc2d5692959a 411 Gene3D G3DSA:3.90.640.10 236 301 7.2E-119 T 14-10-2018 XF_0801 b6620d073732127311c5fc2d5692959a 411 Pfam PF14450 Cell division protein FtsA 11 181 1.6E-11 T 14-10-2018 XF_0801 b6620d073732127311c5fc2d5692959a 411 SUPERFAMILY SSF53067 9 198 1.25E-58 T 14-10-2018 XF_0801 b6620d073732127311c5fc2d5692959a 411 Gene3D G3DSA:3.30.420.40 198 353 7.2E-119 T 14-10-2018 XF_0801 b6620d073732127311c5fc2d5692959a 411 PIRSF PIRSF003101 1 411 5.4E-147 T 14-10-2018 IPR020823 Cell division protein FtsA XF_0801 b6620d073732127311c5fc2d5692959a 411 Pfam PF14450 Cell division protein FtsA 208 361 1.5E-23 T 14-10-2018 XF_2709 7fbf44a272d810b10ffa6f809686b062 494 SUPERFAMILY SSF46548 6 158 3.03E-37 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XF_2709 7fbf44a272d810b10ffa6f809686b062 494 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 7 483 1.0E-253 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 XF_2709 7fbf44a272d810b10ffa6f809686b062 494 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 471 6.2E-26 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XF_2709 7fbf44a272d810b10ffa6f809686b062 494 Gene3D G3DSA:1.10.1060.10 20 145 5.3E-33 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XF_2709 7fbf44a272d810b10ffa6f809686b062 494 Gene3D G3DSA:3.50.50.60 257 409 1.4E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_2709 7fbf44a272d810b10ffa6f809686b062 494 SUPERFAMILY SSF51971 146 410 9.42E-65 T 14-10-2018 XF_2709 7fbf44a272d810b10ffa6f809686b062 494 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 29 135 8.8E-37 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 XF_2709 7fbf44a272d810b10ffa6f809686b062 494 PRINTS PR00419 Adrenodoxin reductase family signature 172 185 1.6E-29 T 14-10-2018 XF_2709 7fbf44a272d810b10ffa6f809686b062 494 PRINTS PR00419 Adrenodoxin reductase family signature 299 313 1.6E-29 T 14-10-2018 XF_2709 7fbf44a272d810b10ffa6f809686b062 494 PRINTS PR00419 Adrenodoxin reductase family signature 149 171 1.6E-29 T 14-10-2018 XF_2709 7fbf44a272d810b10ffa6f809686b062 494 PRINTS PR00419 Adrenodoxin reductase family signature 333 346 1.6E-29 T 14-10-2018 XF_2709 7fbf44a272d810b10ffa6f809686b062 494 Gene3D G3DSA:3.40.50.720 146 256 4.9E-19 T 14-10-2018 XF_2287 7de2f7df9cad0d052f4276feac6afa24 231 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 151 228 8.4E-23 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 XF_2287 7de2f7df9cad0d052f4276feac6afa24 231 Gene3D G3DSA:3.30.1150.10 126 229 1.2E-23 T 14-10-2018 XF_2287 7de2f7df9cad0d052f4276feac6afa24 231 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 152 229 3.7E-24 T 14-10-2018 IPR006260 TonB/TolA, C-terminal XF_2287 7de2f7df9cad0d052f4276feac6afa24 231 SUPERFAMILY SSF74653 146 227 4.97E-20 T 14-10-2018 XF_1740 3e733ffc3d632f3ce40c035c68b22b69 405 Pfam PF07995 Glucose / Sorbosone dehydrogenase 71 398 7.7E-128 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase XF_1740 3e733ffc3d632f3ce40c035c68b22b69 405 Gene3D G3DSA:2.120.10.30 57 402 2.2E-110 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XF_1740 3e733ffc3d632f3ce40c035c68b22b69 405 SUPERFAMILY SSF50952 52 403 3.01E-48 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 XF_1004 a686348eeb9db618968519081a8904b3 384 Hamap MF_00456 Glutamate 5-kinase [proB]. 19 271 34.212 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XF_1004 a686348eeb9db618968519081a8904b3 384 Gene3D G3DSA:2.30.130.10 278 384 1.0E-27 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 XF_1004 a686348eeb9db618968519081a8904b3 384 SUPERFAMILY SSF88697 289 383 2.98E-22 T 14-10-2018 IPR015947 PUA-like superfamily XF_1004 a686348eeb9db618968519081a8904b3 384 SMART SM00359 289 376 9.1E-13 T 14-10-2018 IPR002478 PUA domain GO:0003723 XF_1004 a686348eeb9db618968519081a8904b3 384 TIGRFAM TIGR01027 proB: glutamate 5-kinase 20 382 2.5E-116 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XF_1004 a686348eeb9db618968519081a8904b3 384 Pfam PF00696 Amino acid kinase family 20 247 7.3E-39 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XF_1004 a686348eeb9db618968519081a8904b3 384 PIRSF PIRSF000729 15 384 2.0E-126 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 XF_1004 a686348eeb9db618968519081a8904b3 384 PRINTS PR00474 Glutamate 5-kinase family signature 160 187 3.2E-38 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XF_1004 a686348eeb9db618968519081a8904b3 384 PRINTS PR00474 Glutamate 5-kinase family signature 56 70 3.2E-38 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XF_1004 a686348eeb9db618968519081a8904b3 384 PRINTS PR00474 Glutamate 5-kinase family signature 128 149 3.2E-38 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XF_1004 a686348eeb9db618968519081a8904b3 384 PRINTS PR00474 Glutamate 5-kinase family signature 221 241 3.2E-38 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XF_1004 a686348eeb9db618968519081a8904b3 384 ProSitePatterns PS00902 Glutamate 5-kinase signature. 219 236 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XF_1004 a686348eeb9db618968519081a8904b3 384 SUPERFAMILY SSF53633 19 269 2.49E-60 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XF_1004 a686348eeb9db618968519081a8904b3 384 Pfam PF01472 PUA domain 289 364 2.3E-19 T 14-10-2018 IPR002478 PUA domain GO:0003723 XF_1004 a686348eeb9db618968519081a8904b3 384 Gene3D G3DSA:3.40.1160.10 13 277 1.1E-74 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XF_1196 18c36eddb0ab08657ed351bad92f97a3 830 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 212 817 1.2E-166 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XF_1196 18c36eddb0ab08657ed351bad92f97a3 830 SUPERFAMILY SSF48168 72 293 7.46E-51 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XF_1196 18c36eddb0ab08657ed351bad92f97a3 830 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 208 289 3.3E-14 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XF_1196 18c36eddb0ab08657ed351bad92f97a3 830 Gene3D G3DSA:3.20.70.20 139 823 5.4E-195 T 14-10-2018 XF_1196 18c36eddb0ab08657ed351bad92f97a3 830 SUPERFAMILY SSF51998 294 819 9.16E-165 T 14-10-2018 XF_1196 18c36eddb0ab08657ed351bad92f97a3 830 Pfam PF02867 Ribonucleotide reductase, barrel domain 295 814 1.8E-143 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XF_1196 18c36eddb0ab08657ed351bad92f97a3 830 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 687 709 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XF_1196 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 698 725 1.1E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XF_1196 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 571 594 1.1E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XF_1196 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 370 389 1.1E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XF_1196 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 637 660 1.1E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XF_1196 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 609 631 1.1E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XF_1196 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 513 524 1.1E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XF_1156 69441a0939f294f89264cc95e7a327a1 89 Pfam PF00203 Ribosomal protein S19 3 81 9.2E-34 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1156 69441a0939f294f89264cc95e7a327a1 89 SUPERFAMILY SSF54570 3 82 6.15E-32 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1156 69441a0939f294f89264cc95e7a327a1 89 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 87 24.105 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1156 69441a0939f294f89264cc95e7a327a1 89 ProSitePatterns PS00323 Ribosomal protein S19 signature. 51 75 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1156 69441a0939f294f89264cc95e7a327a1 89 PRINTS PR00975 Ribosomal protein S19 family signature 63 78 3.5E-20 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1156 69441a0939f294f89264cc95e7a327a1 89 PRINTS PR00975 Ribosomal protein S19 family signature 31 50 3.5E-20 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1156 69441a0939f294f89264cc95e7a327a1 89 PRINTS PR00975 Ribosomal protein S19 family signature 51 63 3.5E-20 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1156 69441a0939f294f89264cc95e7a327a1 89 PIRSF PIRSF002144 1 89 8.8E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1156 69441a0939f294f89264cc95e7a327a1 89 Gene3D G3DSA:3.30.860.10 1 89 3.2E-36 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1156 69441a0939f294f89264cc95e7a327a1 89 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 87 5.5E-38 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 XF_1730 7029d8b2caccd7787376610809267477 296 Gene3D G3DSA:1.10.10.10 1 79 5.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1730 7029d8b2caccd7787376610809267477 296 SUPERFAMILY SSF53850 77 291 4.34E-39 T 14-10-2018 XF_1730 7029d8b2caccd7787376610809267477 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 52 1.6E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1730 7029d8b2caccd7787376610809267477 296 SUPERFAMILY SSF46785 2 101 1.22E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_1730 7029d8b2caccd7787376610809267477 296 Gene3D G3DSA:3.40.190.10 153 260 4.8E-59 T 14-10-2018 XF_1730 7029d8b2caccd7787376610809267477 296 Pfam PF03466 LysR substrate binding domain 78 289 1.0E-41 T 14-10-2018 IPR005119 LysR, substrate-binding XF_1730 7029d8b2caccd7787376610809267477 296 Gene3D G3DSA:3.40.190.10 81 286 4.8E-59 T 14-10-2018 XF_0114 39506436fc13942f01a9fd0bba583403 299 Gene3D G3DSA:2.160.10.10 111 281 7.6E-54 T 14-10-2018 XF_0114 39506436fc13942f01a9fd0bba583403 299 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 28 296 4.0E-123 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 XF_0114 39506436fc13942f01a9fd0bba583403 299 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 27 93 2.5E-21 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 XF_0114 39506436fc13942f01a9fd0bba583403 299 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 156 190 3.6E-4 T 14-10-2018 IPR001451 Hexapeptide repeat XF_0114 39506436fc13942f01a9fd0bba583403 299 Gene3D G3DSA:1.10.166.10 25 94 1.4E-20 T 14-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 XF_0114 39506436fc13942f01a9fd0bba583403 299 SUPERFAMILY SSF51161 29 280 1.94E-65 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily XF_0114 39506436fc13942f01a9fd0bba583403 299 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 24 296 53.984 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 XF_0114 39506436fc13942f01a9fd0bba583403 299 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 199 233 7.9E-11 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1856 a20afea35a01860b14fff7d947db77ab 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 8.6E-226 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 XF_1856 a20afea35a01860b14fff7d947db77ab 589 SUPERFAMILY SSF50249 1 112 2.36E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1856 a20afea35a01860b14fff7d947db77ab 589 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 585 32.692 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 XF_1856 a20afea35a01860b14fff7d947db77ab 589 Gene3D G3DSA:3.30.930.10 120 582 3.2E-187 T 14-10-2018 XF_1856 a20afea35a01860b14fff7d947db77ab 589 Pfam PF02938 GAD domain 311 405 3.4E-23 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 XF_1856 a20afea35a01860b14fff7d947db77ab 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 3.8E-107 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_1856 a20afea35a01860b14fff7d947db77ab 589 SUPERFAMILY SSF55681 115 582 3.98E-104 T 14-10-2018 XF_1856 a20afea35a01860b14fff7d947db77ab 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 6.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_1856 a20afea35a01860b14fff7d947db77ab 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 6.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_1856 a20afea35a01860b14fff7d947db77ab 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 6.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_1856 a20afea35a01860b14fff7d947db77ab 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 6.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_1856 a20afea35a01860b14fff7d947db77ab 589 Pfam PF01336 OB-fold nucleic acid binding domain 18 105 2.9E-13 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XF_1856 a20afea35a01860b14fff7d947db77ab 589 SUPERFAMILY SSF55261 293 420 1.13E-36 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 XF_1856 a20afea35a01860b14fff7d947db77ab 589 Gene3D G3DSA:2.40.50.140 1 114 2.5E-29 T 14-10-2018 XF_1856 a20afea35a01860b14fff7d947db77ab 589 Gene3D G3DSA:3.30.1360.30 275 420 3.2E-187 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 XF_1451 f0716069095903df59f007f8f701528c 636 Gene3D G3DSA:3.10.620.30 247 386 2.4E-30 T 14-10-2018 XF_1451 f0716069095903df59f007f8f701528c 636 SUPERFAMILY SSF54001 256 365 2.78E-10 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XF_1451 f0716069095903df59f007f8f701528c 636 Pfam PF01841 Transglutaminase-like superfamily 261 335 1.8E-8 T 14-10-2018 IPR002931 Transglutaminase-like XF_1451 f0716069095903df59f007f8f701528c 636 Gene3D G3DSA:2.60.40.3140 30 237 2.2E-37 T 14-10-2018 XF_1451 f0716069095903df59f007f8f701528c 636 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 47 214 3.1E-36 T 14-10-2018 IPR024618 Domain of unknown function DUF3857 XF_0588 b1f180a7b5d60ad71079dfbddfa75424 390 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 56 293 6.5E-61 T 14-10-2018 IPR018642 Protein of unknown function DUF2066 XF_0511 96e113d0a881053ff402ae7fcfe0cfa0 752 SUPERFAMILY SSF52096 18 191 1.12E-36 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XF_0511 96e113d0a881053ff402ae7fcfe0cfa0 752 Gene3D G3DSA:3.90.226.10 16 196 4.7E-40 T 14-10-2018 XF_0511 96e113d0a881053ff402ae7fcfe0cfa0 752 Pfam PF00574 Clp protease 44 190 7.6E-26 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA XF_0511 96e113d0a881053ff402ae7fcfe0cfa0 752 PRINTS PR00127 Clp protease catalytic subunit P signature 167 186 1.6E-8 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XF_0511 96e113d0a881053ff402ae7fcfe0cfa0 752 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 1.6E-8 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XF_0511 96e113d0a881053ff402ae7fcfe0cfa0 752 PRINTS PR00127 Clp protease catalytic subunit P signature 109 128 1.6E-8 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XF_0547 a1ed39bdf2ebb4a0376a8707893c2171 159 Gene3D G3DSA:1.10.15.40 30 80 7.7E-11 T 14-10-2018 XF_0547 a1ed39bdf2ebb4a0376a8707893c2171 159 Pfam PF04060 Putative Fe-S cluster 37 69 8.2E-15 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 XF_0547 a1ed39bdf2ebb4a0376a8707893c2171 159 SUPERFAMILY SSF54862 30 157 2.06E-27 T 14-10-2018 XF_0547 a1ed39bdf2ebb4a0376a8707893c2171 159 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 15 158 5.5E-69 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 XF_0547 a1ed39bdf2ebb4a0376a8707893c2171 159 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XF_0547 a1ed39bdf2ebb4a0376a8707893c2171 159 Pfam PF14697 4Fe-4S dicluster domain 102 155 5.9E-15 T 14-10-2018 XF_0547 a1ed39bdf2ebb4a0376a8707893c2171 159 Gene3D G3DSA:3.30.70.20 81 159 1.5E-17 T 14-10-2018 XF_0547 a1ed39bdf2ebb4a0376a8707893c2171 159 PIRSF PIRSF005784 15 159 8.5E-64 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 XF_0190 524e00660c1453e210790658f4420798 244 Gene3D G3DSA:3.40.1280.10 74 244 5.4E-58 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XF_0190 524e00660c1453e210790658f4420798 244 Pfam PF04452 RNA methyltransferase 21 239 7.0E-72 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 XF_0190 524e00660c1453e210790658f4420798 244 SUPERFAMILY SSF75217 74 244 1.99E-51 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases XF_0190 524e00660c1453e210790658f4420798 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 244 1.5E-53 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 XF_0190 524e00660c1453e210790658f4420798 244 Gene3D G3DSA:2.40.240.20 1 68 9.5E-16 T 14-10-2018 XF_0190 524e00660c1453e210790658f4420798 244 SUPERFAMILY SSF88697 3 69 3.73E-14 T 14-10-2018 IPR015947 PUA-like superfamily XF_0190 524e00660c1453e210790658f4420798 244 PIRSF PIRSF015601 5 244 1.3E-55 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 635 8.1E-107 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 Pfam PF01578 Cytochrome C assembly protein 89 295 6.8E-48 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 637 8.6E-206 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 1.1E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 1.1E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.1E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.1E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 1.1E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 1.1E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 1.1E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 1.1E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 356 373 1.8E-44 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.8E-44 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.8E-44 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 399 418 1.8E-44 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 628 641 1.8E-44 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2460 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 1.8E-44 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_1718 17e054d48b98b59d2ad0b3ee14c2a501 653 Pfam PF13356 Arm DNA-binding domain 3 87 1.6E-16 T 14-10-2018 IPR025166 Integrase, DNA-binding domain XF_1718 17e054d48b98b59d2ad0b3ee14c2a501 653 Gene3D G3DSA:3.30.160.390 1 99 1.1E-29 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily XF_1718 17e054d48b98b59d2ad0b3ee14c2a501 653 Gene3D G3DSA:1.10.150.130 100 209 1.9E-24 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal XF_1718 17e054d48b98b59d2ad0b3ee14c2a501 653 SUPERFAMILY SSF56349 99 401 2.03E-48 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XF_1718 17e054d48b98b59d2ad0b3ee14c2a501 653 Pfam PF00589 Phage integrase family 215 391 6.7E-16 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XF_1718 17e054d48b98b59d2ad0b3ee14c2a501 653 Gene3D G3DSA:1.10.443.10 211 402 4.1E-12 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XF_1718 17e054d48b98b59d2ad0b3ee14c2a501 653 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 150 5.0E-5 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XF_1719 a416807b2bd47b1f6aac97fd52657c48 221 Pfam PF03466 LysR substrate binding domain 10 206 7.0E-27 T 14-10-2018 IPR005119 LysR, substrate-binding XF_1719 a416807b2bd47b1f6aac97fd52657c48 221 SUPERFAMILY SSF53850 12 213 8.32E-26 T 14-10-2018 XF_1719 a416807b2bd47b1f6aac97fd52657c48 221 Gene3D G3DSA:3.40.190.10 16 204 5.7E-23 T 14-10-2018 XF_1719 a416807b2bd47b1f6aac97fd52657c48 221 Gene3D G3DSA:3.40.190.10 85 187 5.7E-23 T 14-10-2018 XF_1385 9de8af4c8074869ca3b8e005b185c9e7 993 Pfam PF02347 Glycine cleavage system P-protein 32 453 1.2E-174 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XF_1385 9de8af4c8074869ca3b8e005b185c9e7 993 Pfam PF02347 Glycine cleavage system P-protein 458 813 2.6E-11 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XF_1385 9de8af4c8074869ca3b8e005b185c9e7 993 SUPERFAMILY SSF53383 33 449 3.87E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XF_1385 9de8af4c8074869ca3b8e005b185c9e7 993 Gene3D G3DSA:3.90.1150.10 782 921 1.3E-39 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XF_1385 9de8af4c8074869ca3b8e005b185c9e7 993 Gene3D G3DSA:3.40.640.10 111 369 3.2E-107 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XF_1385 9de8af4c8074869ca3b8e005b185c9e7 993 Gene3D G3DSA:3.40.640.10 532 757 6.2E-59 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XF_1385 9de8af4c8074869ca3b8e005b185c9e7 993 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 33 968 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XF_1385 9de8af4c8074869ca3b8e005b185c9e7 993 SUPERFAMILY SSF53383 483 969 4.03E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XF_1385 9de8af4c8074869ca3b8e005b185c9e7 993 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 24 974 25.414 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XF_1013 a651eb6eb9690dd80d8a6046c057802b 160 SUPERFAMILY SSF46785 52 126 2.14E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_1013 a651eb6eb9690dd80d8a6046c057802b 160 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 99 155 3.2E-11 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 XF_1013 a651eb6eb9690dd80d8a6046c057802b 160 SMART SM00529 60 159 2.3E-29 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 XF_1013 a651eb6eb9690dd80d8a6046c057802b 160 Gene3D G3DSA:1.10.60.10 99 158 6.8E-22 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 XF_1013 a651eb6eb9690dd80d8a6046c057802b 160 Gene3D G3DSA:1.10.10.10 28 98 9.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1013 a651eb6eb9690dd80d8a6046c057802b 160 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 42 95 6.1E-11 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 XF_0378 40bbbfa17cb85096ea5eeb35768ece7c 234 SUPERFAMILY SSF51391 31 231 3.14E-54 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XF_0378 40bbbfa17cb85096ea5eeb35768ece7c 234 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 35 233 23.857 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XF_0378 40bbbfa17cb85096ea5eeb35768ece7c 234 Pfam PF02581 Thiamine monophosphate synthase 37 215 4.2E-50 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XF_0378 40bbbfa17cb85096ea5eeb35768ece7c 234 Gene3D G3DSA:3.20.20.70 24 233 1.4E-52 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_0378 40bbbfa17cb85096ea5eeb35768ece7c 234 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 37 226 2.3E-58 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XF_2724 41d3110d10105abdd754bc650edd9f2e 382 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 331 337 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XF_2724 41d3110d10105abdd754bc650edd9f2e 382 Pfam PF12161 HsdM N-terminal domain 32 167 2.1E-20 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain XF_2724 41d3110d10105abdd754bc650edd9f2e 382 Gene3D G3DSA:3.40.50.150 195 382 2.5E-46 T 14-10-2018 XF_2724 41d3110d10105abdd754bc650edd9f2e 382 Pfam PF02384 N-6 DNA Methylase 193 357 1.0E-28 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 XF_2724 41d3110d10105abdd754bc650edd9f2e 382 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 328 340 1.4E-11 T 14-10-2018 XF_2724 41d3110d10105abdd754bc650edd9f2e 382 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 216 232 1.4E-11 T 14-10-2018 XF_2724 41d3110d10105abdd754bc650edd9f2e 382 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 247 261 1.4E-11 T 14-10-2018 XF_2724 41d3110d10105abdd754bc650edd9f2e 382 SUPERFAMILY SSF53335 31 382 4.49E-60 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_2134 51bdcace97ba8f8c58f3c3a40ec2c520 793 SUPERFAMILY SSF56935 33 793 3.3E-97 T 14-10-2018 XF_2134 51bdcace97ba8f8c58f3c3a40ec2c520 793 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 14-10-2018 IPR010916 TonB box, conserved site XF_2134 51bdcace97ba8f8c58f3c3a40ec2c520 793 Pfam PF00593 TonB dependent receptor 284 781 1.0E-44 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XF_2134 51bdcace97ba8f8c58f3c3a40ec2c520 793 Gene3D G3DSA:2.170.130.10 28 172 1.2E-33 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XF_2134 51bdcace97ba8f8c58f3c3a40ec2c520 793 Gene3D G3DSA:2.40.170.20 275 779 7.3E-54 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XF_2134 51bdcace97ba8f8c58f3c3a40ec2c520 793 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 168 1.1E-20 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 5.5E-14 T 14-10-2018 XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 5.5E-14 T 14-10-2018 XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 5.5E-14 T 14-10-2018 XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.2E-6 T 14-10-2018 XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.2E-6 T 14-10-2018 XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 SUPERFAMILY SSF52317 1 192 5.58E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.5E-36 T 14-10-2018 XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.5E-36 T 14-10-2018 XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.5E-36 T 14-10-2018 XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.5E-36 T 14-10-2018 XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.5E-36 T 14-10-2018 XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.5E-36 T 14-10-2018 XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 Pfam PF00117 Glutamine amidotransferase class-I 4 190 8.1E-53 T 14-10-2018 IPR017926 Glutamine amidotransferase XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 1.9E-79 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_0211 2dee3d36a8e46a5e807e0d5fa6ae301e 194 Gene3D G3DSA:3.40.50.880 1 192 4.4E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 SUPERFAMILY SSF46589 930 994 3.77E-16 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 930 994 6.6E-19 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 Gene3D G3DSA:1.10.730.10 612 863 1.9E-65 T 14-10-2018 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 SUPERFAMILY SSF52374 2 672 1.94E-125 T 14-10-2018 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 976 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 662 5.7E-190 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 994 15.398 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 Gene3D G3DSA:3.90.740.10 200 391 3.6E-45 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 Gene3D G3DSA:3.40.50.620 392 611 1.3E-57 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 Pfam PF08264 Anticodon-binding domain of tRNA 718 869 2.2E-39 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 4.7E-30 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 PRINTS PR00986 Valyl-tRNA synthetase signature 251 268 4.7E-30 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 PRINTS PR00986 Valyl-tRNA synthetase signature 502 523 4.7E-30 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 PRINTS PR00986 Valyl-tRNA synthetase signature 537 555 4.7E-30 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 SUPERFAMILY SSF47323 673 945 6.73E-58 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 SUPERFAMILY SSF50677 195 398 1.83E-50 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 Gene3D G3DSA:1.10.287.380 923 994 3.0E-21 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 XF_0134 7e48a1a9dd48db5e627e90fa2274d451 994 Gene3D G3DSA:3.40.50.620 5 199 8.3E-59 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_1809 e36e1912ef3d71ca6cca9f982ee8fce1 244 SMART SM00493 125 210 8.0E-9 T 14-10-2018 IPR006171 TOPRIM domain XF_1809 e36e1912ef3d71ca6cca9f982ee8fce1 244 Hamap MF_00017 Recombination protein RecR [recR]. 47 243 85.526 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 XF_1809 e36e1912ef3d71ca6cca9f982ee8fce1 244 Gene3D G3DSA:3.40.1360.10 122 243 4.6E-39 T 14-10-2018 XF_1809 e36e1912ef3d71ca6cca9f982ee8fce1 244 Gene3D G3DSA:1.10.8.420 48 97 2.3E-16 T 14-10-2018 XF_1809 e36e1912ef3d71ca6cca9f982ee8fce1 244 SUPERFAMILY SSF111304 47 243 7.45E-70 T 14-10-2018 IPR023627 Recombination protein RecR XF_1809 e36e1912ef3d71ca6cca9f982ee8fce1 244 Pfam PF02132 RecR protein 85 123 4.9E-12 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger XF_1809 e36e1912ef3d71ca6cca9f982ee8fce1 244 ProSitePatterns PS01300 RecR protein signature. 102 123 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 XF_1809 e36e1912ef3d71ca6cca9f982ee8fce1 244 TIGRFAM TIGR00615 recR: recombination protein RecR 48 240 8.3E-69 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 XF_1809 e36e1912ef3d71ca6cca9f982ee8fce1 244 Pfam PF13662 Toprim domain 126 216 6.7E-21 T 14-10-2018 IPR006171 TOPRIM domain XF_0103 f1ddfd095c261ce03133658d0a68c570 443 Pfam PF04932 O-Antigen ligase 221 373 4.6E-20 T 14-10-2018 IPR007016 O-antigen ligase-related XF_0659 74ef8482305b2fad185a459c14ec2a92 437 Gene3D G3DSA:3.40.50.620 9 226 8.6E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0659 74ef8482305b2fad185a459c14ec2a92 437 SUPERFAMILY SSF56037 317 431 3.92E-25 T 14-10-2018 XF_0659 74ef8482305b2fad185a459c14ec2a92 437 SUPERFAMILY SSF82829 231 313 4.19E-18 T 14-10-2018 XF_0659 74ef8482305b2fad185a459c14ec2a92 437 Pfam PF09179 TilS substrate binding domain 242 309 1.2E-13 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XF_0659 74ef8482305b2fad185a459c14ec2a92 437 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 301 20.967 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XF_0659 74ef8482305b2fad185a459c14ec2a92 437 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 17 197 8.8E-49 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XF_0659 74ef8482305b2fad185a459c14ec2a92 437 SUPERFAMILY SSF52402 13 224 7.28E-53 T 14-10-2018 XF_0659 74ef8482305b2fad185a459c14ec2a92 437 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 356 402 3.8E-17 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XF_0659 74ef8482305b2fad185a459c14ec2a92 437 Pfam PF01171 PP-loop family 17 192 2.1E-58 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 XF_0659 74ef8482305b2fad185a459c14ec2a92 437 SMART SM00977 356 429 2.1E-19 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XF_0659 74ef8482305b2fad185a459c14ec2a92 437 Pfam PF11734 TilS substrate C-terminal domain 358 429 9.7E-20 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XF_0659 74ef8482305b2fad185a459c14ec2a92 437 Gene3D G3DSA:1.20.59.20 230 312 7.4E-15 T 14-10-2018 XF_0208 da9b54a585ed0463e1c7732868467048 239 SUPERFAMILY SSF51366 17 232 4.58E-73 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XF_0208 da9b54a585ed0463e1c7732868467048 239 Gene3D G3DSA:3.20.20.70 20 238 5.3E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_0208 da9b54a585ed0463e1c7732868467048 239 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 49 63 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XF_0208 da9b54a585ed0463e1c7732868467048 239 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 21 232 3.1E-96 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XF_0208 da9b54a585ed0463e1c7732868467048 239 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 152 174 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XF_0208 da9b54a585ed0463e1c7732868467048 239 PIRSF PIRSF001461 16 239 1.3E-100 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XF_0208 da9b54a585ed0463e1c7732868467048 239 Pfam PF00834 Ribulose-phosphate 3 epimerase family 22 219 1.0E-87 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XF_2384 63cdb25f72c66d3d02655e0080b379e6 411 Gene3D G3DSA:2.40.420.20 305 374 1.6E-86 T 14-10-2018 XF_2384 63cdb25f72c66d3d02655e0080b379e6 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 374 9.2E-81 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XF_2384 63cdb25f72c66d3d02655e0080b379e6 411 SUPERFAMILY SSF111369 63 299 8.24E-56 T 14-10-2018 XF_2384 63cdb25f72c66d3d02655e0080b379e6 411 Gene3D G3DSA:1.10.287.470 108 181 1.6E-86 T 14-10-2018 XF_2384 63cdb25f72c66d3d02655e0080b379e6 411 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 73 294 5.4E-19 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XF_2384 63cdb25f72c66d3d02655e0080b379e6 411 Gene3D G3DSA:2.40.30.170 60 304 1.6E-86 T 14-10-2018 XF_2384 63cdb25f72c66d3d02655e0080b379e6 411 Gene3D G3DSA:2.40.50.100 73 215 1.6E-86 T 14-10-2018 XF_0822 f2c6cab9ec3e2ddf8743c218e3c0d326 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 1.2E-166 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XF_0822 f2c6cab9ec3e2ddf8743c218e3c0d326 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0822 f2c6cab9ec3e2ddf8743c218e3c0d326 467 SUPERFAMILY SSF52374 4 296 9.12E-102 T 14-10-2018 XF_0822 f2c6cab9ec3e2ddf8743c218e3c0d326 467 Gene3D G3DSA:3.40.50.620 2 314 3.6E-126 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0822 f2c6cab9ec3e2ddf8743c218e3c0d326 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 305 2.8E-98 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 XF_0822 f2c6cab9ec3e2ddf8743c218e3c0d326 467 SUPERFAMILY SSF48163 299 461 9.16E-38 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XF_0822 f2c6cab9ec3e2ddf8743c218e3c0d326 467 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 29.857 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XF_0822 f2c6cab9ec3e2ddf8743c218e3c0d326 467 Gene3D G3DSA:1.10.10.350 369 466 3.9E-23 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XF_0822 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 6.2E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XF_0822 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 6.2E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XF_0822 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 6.2E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XF_0822 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 6.2E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XF_0822 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 6.2E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XF_2052 bd591f7e3e6dcacc0e2ce34b1ab8603e 238 SUPERFAMILY SSF54427 103 237 2.85E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily XF_2052 bd591f7e3e6dcacc0e2ce34b1ab8603e 238 Gene3D G3DSA:3.10.450.230 132 238 4.7E-6 T 14-10-2018 XF_2052 bd591f7e3e6dcacc0e2ce34b1ab8603e 238 Pfam PF04335 VirB8 protein 26 237 5.1E-49 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 XF_1998 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 70 90 8.4E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XF_1998 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 53 70 8.4E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XF_1998 fabaf4de59a16c7851fc9b17567bf576 90 SUPERFAMILY SSF46689 4 89 4.3E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XF_1998 fabaf4de59a16c7851fc9b17567bf576 90 PIRSF PIRSF002097 2 90 4.6E-34 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XF_1998 fabaf4de59a16c7851fc9b17567bf576 90 Pfam PF02954 Bacterial regulatory protein, Fis family 48 87 8.1E-15 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XF_1998 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01591 DNA-binding protein FIS signature 18 34 5.3E-9 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XF_1998 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01591 DNA-binding protein FIS signature 34 49 5.3E-9 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XF_1998 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01591 DNA-binding protein FIS signature 49 61 5.3E-9 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XF_1998 fabaf4de59a16c7851fc9b17567bf576 90 Gene3D G3DSA:1.10.10.60 3 89 6.8E-27 T 14-10-2018 XF_2205 547a350d1af3984a1d25cf30f395db54 454 Gene3D G3DSA:3.30.465.10 86 206 4.7E-41 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XF_2205 547a350d1af3984a1d25cf30f395db54 454 Pfam PF02913 FAD linked oxidases, C-terminal domain 209 451 1.1E-54 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 XF_2205 547a350d1af3984a1d25cf30f395db54 454 SUPERFAMILY SSF55103 181 453 3.76E-54 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 XF_2205 547a350d1af3984a1d25cf30f395db54 454 Pfam PF01565 FAD binding domain 32 170 2.7E-41 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 XF_2205 547a350d1af3984a1d25cf30f395db54 454 Gene3D G3DSA:3.30.70.2190 208 323 6.4E-24 T 14-10-2018 XF_2205 547a350d1af3984a1d25cf30f395db54 454 Gene3D G3DSA:3.30.70.2740 326 411 2.8E-25 T 14-10-2018 XF_2205 547a350d1af3984a1d25cf30f395db54 454 Gene3D G3DSA:3.30.43.10 1 84 6.2E-23 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 XF_2205 547a350d1af3984a1d25cf30f395db54 454 SUPERFAMILY SSF56176 9 208 6.13E-66 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XF_2205 547a350d1af3984a1d25cf30f395db54 454 Gene3D G3DSA:1.10.45.10 412 452 3.3E-15 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 Pfam PF07244 Surface antigen variable number repeat 99 178 2.9E-13 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 Pfam PF07244 Surface antigen variable number repeat 353 426 2.0E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 Pfam PF07244 Surface antigen variable number repeat 33 97 2.0E-4 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 Pfam PF07244 Surface antigen variable number repeat 272 347 4.6E-10 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 Pfam PF07244 Surface antigen variable number repeat 182 269 1.2E-11 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 31 784 5.2E-244 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 Gene3D G3DSA:3.10.20.310 352 427 1.4E-24 T 14-10-2018 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 Pfam PF01103 Surface antigen 454 784 1.1E-89 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 Gene3D G3DSA:3.10.20.310 98 179 2.2E-18 T 14-10-2018 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 Gene3D G3DSA:2.40.160.50 432 784 1.3E-104 T 14-10-2018 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 Gene3D G3DSA:3.10.20.310 271 351 1.3E-16 T 14-10-2018 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 Gene3D G3DSA:3.10.20.310 24 97 6.3E-21 T 14-10-2018 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 PIRSF PIRSF006076 1 784 3.7E-250 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 Gene3D G3DSA:3.10.20.310 181 270 2.4E-19 T 14-10-2018 XF_1046 dd95c9ded2974e677cd2b5911ff59bd1 784 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 8 784 24.998 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 XF_2710 24349ddd3ffd288639f57ed1b59bb560 1489 Pfam PF04898 Glutamate synthase central domain 466 749 1.0E-97 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 XF_2710 24349ddd3ffd288639f57ed1b59bb560 1489 Pfam PF00310 Glutamine amidotransferases class-II 24 436 7.4E-158 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain XF_2710 24349ddd3ffd288639f57ed1b59bb560 1489 Gene3D G3DSA:3.60.20.10 24 554 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XF_2710 24349ddd3ffd288639f57ed1b59bb560 1489 SUPERFAMILY SSF56235 24 439 2.67E-132 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XF_2710 24349ddd3ffd288639f57ed1b59bb560 1489 SUPERFAMILY SSF51395 455 1201 9.16E-249 T 14-10-2018 XF_2710 24349ddd3ffd288639f57ed1b59bb560 1489 SUPERFAMILY SSF69336 1220 1475 2.49E-83 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 XF_2710 24349ddd3ffd288639f57ed1b59bb560 1489 Gene3D G3DSA:2.160.20.60 1209 1479 1.1E-96 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 XF_2710 24349ddd3ffd288639f57ed1b59bb560 1489 Pfam PF01645 Conserved region in glutamate synthase 805 1167 2.1E-148 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 XF_2710 24349ddd3ffd288639f57ed1b59bb560 1489 Gene3D G3DSA:3.20.20.70 441 804 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_2710 24349ddd3ffd288639f57ed1b59bb560 1489 Gene3D G3DSA:3.20.20.70 492 1183 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_2710 24349ddd3ffd288639f57ed1b59bb560 1489 Pfam PF01493 GXGXG motif 1246 1428 3.0E-74 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 XF_0252 cf9395718e3166f051a8b6f350d7635b 614 Pfam PF00270 DEAD/DEAH box helicase 40 204 7.1E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XF_0252 cf9395718e3166f051a8b6f350d7635b 614 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 10 574 46.703 T 14-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 XF_0252 cf9395718e3166f051a8b6f350d7635b 614 SMART SM00487 34 232 2.0E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_0252 cf9395718e3166f051a8b6f350d7635b 614 Pfam PF03880 DbpA RNA binding domain 503 572 8.0E-23 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain XF_0252 cf9395718e3166f051a8b6f350d7635b 614 SUPERFAMILY SSF52540 84 370 4.69E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0252 cf9395718e3166f051a8b6f350d7635b 614 Pfam PF00271 Helicase conserved C-terminal domain 241 349 1.1E-29 T 14-10-2018 IPR001650 Helicase, C-terminal XF_0252 cf9395718e3166f051a8b6f350d7635b 614 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XF_0252 cf9395718e3166f051a8b6f350d7635b 614 Gene3D G3DSA:3.40.50.300 223 440 4.0E-53 T 14-10-2018 XF_0252 cf9395718e3166f051a8b6f350d7635b 614 Gene3D G3DSA:3.30.70.330 503 575 2.2E-13 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily XF_0252 cf9395718e3166f051a8b6f350d7635b 614 SMART SM00490 268 349 2.3E-34 T 14-10-2018 IPR001650 Helicase, C-terminal XF_0252 cf9395718e3166f051a8b6f350d7635b 614 Gene3D G3DSA:3.40.50.300 7 221 1.6E-75 T 14-10-2018 XF_1076 018ca9591a13bb76da17bcd3f9a300f3 413 Pfam PF02687 FtsX-like permease family 300 406 5.5E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 XF_1076 018ca9591a13bb76da17bcd3f9a300f3 413 Pfam PF12704 MacB-like periplasmic core domain 28 226 2.5E-14 T 14-10-2018 IPR025857 MacB-like periplasmic core domain XF_1076 018ca9591a13bb76da17bcd3f9a300f3 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 2.9E-141 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 XF_2437 0debd9d09dc0217ac007f1dd4a82f0fe 126 SMART SM00411 23 113 3.1E-39 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_2437 0debd9d09dc0217ac007f1dd4a82f0fe 126 Pfam PF00216 Bacterial DNA-binding protein 23 112 1.0E-27 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_2437 0debd9d09dc0217ac007f1dd4a82f0fe 126 PRINTS PR01727 Prokaryotic integration host factor signature 97 111 4.3E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_2437 0debd9d09dc0217ac007f1dd4a82f0fe 126 PRINTS PR01727 Prokaryotic integration host factor signature 63 78 4.3E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_2437 0debd9d09dc0217ac007f1dd4a82f0fe 126 PRINTS PR01727 Prokaryotic integration host factor signature 81 94 4.3E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_2437 0debd9d09dc0217ac007f1dd4a82f0fe 126 Gene3D G3DSA:4.10.520.10 23 114 3.6E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XF_2437 0debd9d09dc0217ac007f1dd4a82f0fe 126 SUPERFAMILY SSF47729 23 113 6.62E-29 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XF_2437 0debd9d09dc0217ac007f1dd4a82f0fe 126 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 23 113 1.5E-41 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 XF_2437 0debd9d09dc0217ac007f1dd4a82f0fe 126 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 69 88 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 XF_2437 0debd9d09dc0217ac007f1dd4a82f0fe 126 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 23 116 28.501 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 XF_1363 cb43746e560ccad7910147b560452187 710 Gene3D G3DSA:1.25.20.10 88 441 6.8E-79 T 14-10-2018 XF_1363 cb43746e560ccad7910147b560452187 710 SUPERFAMILY SSF53955 538 694 1.69E-48 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_1363 cb43746e560ccad7910147b560452187 710 Pfam PF14718 Soluble lytic murein transglycosylase L domain 463 521 3.9E-9 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 XF_1363 cb43746e560ccad7910147b560452187 710 SUPERFAMILY SSF48435 86 535 3.79E-102 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 XF_1363 cb43746e560ccad7910147b560452187 710 Gene3D G3DSA:1.10.530.10 532 698 5.5E-49 T 14-10-2018 XF_1363 cb43746e560ccad7910147b560452187 710 Pfam PF01464 Transglycosylase SLT domain 542 655 1.4E-26 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 XF_1682 cd94a09adf630c7c26868a26500b80b4 327 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 84 327 3.1E-77 T 14-10-2018 IPR020049 Protein of unknown function DUF2184 XF_1682 cd94a09adf630c7c26868a26500b80b4 327 PIRSF PIRSF029202 22 327 1.7E-132 T 14-10-2018 IPR020049 Protein of unknown function DUF2184 XF_1577 cd94a09adf630c7c26868a26500b80b4 327 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 84 327 3.1E-77 T 14-10-2018 IPR020049 Protein of unknown function DUF2184 XF_1577 cd94a09adf630c7c26868a26500b80b4 327 PIRSF PIRSF029202 22 327 1.7E-132 T 14-10-2018 IPR020049 Protein of unknown function DUF2184 XF_1324 cf05c79b076312e0f1e7311169aec3f0 395 SUPERFAMILY SSF55136 299 370 6.28E-5 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily XF_1324 cf05c79b076312e0f1e7311169aec3f0 395 Gene3D G3DSA:3.20.80.10 301 380 2.9E-5 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily XF_1843 fe42fec408addac8764cf5a7e3d2b9a0 112 SUPERFAMILY SSF54913 1 112 3.11E-44 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta XF_1843 fe42fec408addac8764cf5a7e3d2b9a0 112 PIRSF PIRSF039144 1 112 2.3E-52 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XF_1843 fe42fec408addac8764cf5a7e3d2b9a0 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 XF_1843 fe42fec408addac8764cf5a7e3d2b9a0 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.2E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XF_1843 fe42fec408addac8764cf5a7e3d2b9a0 112 SMART SM00938 4 105 2.9E-61 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XF_1843 fe42fec408addac8764cf5a7e3d2b9a0 112 PRINTS PR00340 P-II protein signature 83 103 1.7E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XF_1843 fe42fec408addac8764cf5a7e3d2b9a0 112 PRINTS PR00340 P-II protein signature 2 17 1.7E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XF_1843 fe42fec408addac8764cf5a7e3d2b9a0 112 PRINTS PR00340 P-II protein signature 52 75 1.7E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XF_1843 fe42fec408addac8764cf5a7e3d2b9a0 112 PRINTS PR00340 P-II protein signature 23 41 1.7E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XF_1843 fe42fec408addac8764cf5a7e3d2b9a0 112 Gene3D G3DSA:3.30.70.120 1 112 2.1E-44 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XF_0796 f5558f176c446f2eb98b79eebe09d51d 423 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 19 372 1.2E-124 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0796 f5558f176c446f2eb98b79eebe09d51d 423 Pfam PF01098 Cell cycle protein 23 372 6.5E-102 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0796 f5558f176c446f2eb98b79eebe09d51d 423 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 17 381 37.787 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_2416 07f4e64909ba7c16d1ed9ecc64528033 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 37.808 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 XF_2416 07f4e64909ba7c16d1ed9ecc64528033 316 Gene3D G3DSA:3.40.50.11270 12 96 2.7E-109 T 14-10-2018 XF_2416 07f4e64909ba7c16d1ed9ecc64528033 316 Gene3D G3DSA:3.40.1010.20 97 198 2.7E-109 T 14-10-2018 XF_2416 07f4e64909ba7c16d1ed9ecc64528033 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 3.4E-98 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 XF_2416 07f4e64909ba7c16d1ed9ecc64528033 316 Gene3D G3DSA:3.40.1010.20 6 283 2.7E-109 T 14-10-2018 XF_2416 07f4e64909ba7c16d1ed9ecc64528033 316 Pfam PF02401 LytB protein 3 284 1.2E-90 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 XF_1207 aa3d8eae98ca9e13e49b18694af72d0a 54 Pfam PF00471 Ribosomal protein L33 7 52 5.8E-18 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1207 aa3d8eae98ca9e13e49b18694af72d0a 54 ProSitePatterns PS00582 Ribosomal protein L33 signature. 20 39 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1207 aa3d8eae98ca9e13e49b18694af72d0a 54 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 54 2.3E-24 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1207 aa3d8eae98ca9e13e49b18694af72d0a 54 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 4 52 14.671 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1207 aa3d8eae98ca9e13e49b18694af72d0a 54 Gene3D G3DSA:2.20.28.120 1 54 6.8E-27 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1207 aa3d8eae98ca9e13e49b18694af72d0a 54 SUPERFAMILY SSF57829 3 52 1.71E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 XF_2056 aab501ee484c6209d479cf26771fb71a 97 Gene3D G3DSA:3.40.50.300 1 91 4.7E-19 T 14-10-2018 XF_2056 aab501ee484c6209d479cf26771fb71a 97 Pfam PF00437 Type II/IV secretion system protein 5 72 4.7E-16 T 14-10-2018 IPR001482 Type II/IV secretion system protein XF_0432 0b9c6a58853562a503667bac4475c10d 269 Pfam PF03631 Virulence factor BrkB 11 258 1.8E-51 T 14-10-2018 IPR017039 Virulence factor BrkB XF_0432 0b9c6a58853562a503667bac4475c10d 269 PIRSF PIRSF035875 1 269 6.5E-65 T 14-10-2018 IPR017039 Virulence factor BrkB XF_0432 0b9c6a58853562a503667bac4475c10d 269 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 2 257 8.5E-30 T 14-10-2018 IPR017039 Virulence factor BrkB XF_2680 edb432c4f0a20ccae3f98a96dbd8440a 680 Gene3D G3DSA:3.40.50.300 26 287 2.2E-84 T 14-10-2018 XF_2680 edb432c4f0a20ccae3f98a96dbd8440a 680 Pfam PF13361 UvrD-like helicase C-terminal domain 291 625 2.9E-62 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XF_2680 edb432c4f0a20ccae3f98a96dbd8440a 680 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 26 679 0.0 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 XF_2680 edb432c4f0a20ccae3f98a96dbd8440a 680 Gene3D G3DSA:1.10.486.10 397 552 2.4E-104 T 14-10-2018 XF_2680 edb432c4f0a20ccae3f98a96dbd8440a 680 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 24 680 35.926 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 XF_2680 edb432c4f0a20ccae3f98a96dbd8440a 680 Gene3D G3DSA:1.10.10.160 128 203 2.2E-84 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily XF_2680 edb432c4f0a20ccae3f98a96dbd8440a 680 Pfam PF00580 UvrD/REP helicase N-terminal domain 26 285 2.2E-66 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 XF_2680 edb432c4f0a20ccae3f98a96dbd8440a 680 SUPERFAMILY SSF52540 22 650 7.89E-157 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2680 edb432c4f0a20ccae3f98a96dbd8440a 680 Gene3D G3DSA:3.40.50.300 295 645 2.4E-104 T 14-10-2018 XF_1606 e63b13566a10468ddebc14ddb9681836 450 PIRSF PIRSF000124 1 444 2.0E-150 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XF_1606 e63b13566a10468ddebc14ddb9681836 450 SMART SM00984 325 429 3.3E-49 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XF_1606 e63b13566a10468ddebc14ddb9681836 450 PIRSF PIRSF500134 1 447 2.6E-186 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 XF_1606 e63b13566a10468ddebc14ddb9681836 450 SUPERFAMILY SSF48179 204 301 5.27E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XF_1606 e63b13566a10468ddebc14ddb9681836 450 SUPERFAMILY SSF52413 319 440 2.62E-38 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 XF_1606 e63b13566a10468ddebc14ddb9681836 450 Gene3D G3DSA:3.40.50.720 235 450 1.4E-75 T 14-10-2018 XF_1606 e63b13566a10468ddebc14ddb9681836 450 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 425 7.7E-137 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XF_1606 e63b13566a10468ddebc14ddb9681836 450 Gene3D G3DSA:1.20.5.100 203 233 5.1E-18 T 14-10-2018 XF_1606 e63b13566a10468ddebc14ddb9681836 450 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 429 4.7E-31 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XF_1606 e63b13566a10468ddebc14ddb9681836 450 Gene3D G3DSA:3.40.50.720 1 202 1.1E-78 T 14-10-2018 XF_1606 e63b13566a10468ddebc14ddb9681836 450 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 5.1E-38 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XF_1606 e63b13566a10468ddebc14ddb9681836 450 SUPERFAMILY SSF51735 1 195 2.63E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1606 e63b13566a10468ddebc14ddb9681836 450 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 1.9E-68 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XF_0866 db0821b309cdbf70293dff0f6913ddef 321 SUPERFAMILY SSF160240 241 308 6.15E-8 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 XF_0866 db0821b309cdbf70293dff0f6913ddef 321 SUPERFAMILY SSF161111 36 231 1.1E-58 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily XF_0866 db0821b309cdbf70293dff0f6913ddef 321 Gene3D G3DSA:1.20.1510.10 36 230 5.4E-49 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily XF_0866 db0821b309cdbf70293dff0f6913ddef 321 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 36 310 3.3E-85 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 XF_0866 db0821b309cdbf70293dff0f6913ddef 321 Pfam PF01545 Cation efflux family 40 230 6.5E-49 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 XF_1900 b2c70aaf8540cd7f7d19328dc2e0a2a4 257 Pfam PF01618 MotA/TolQ/ExbB proton channel family 109 239 2.0E-37 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel XF_1900 b2c70aaf8540cd7f7d19328dc2e0a2a4 257 TIGRFAM TIGR02796 tolQ: protein TolQ 36 251 5.6E-86 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 XF_1900 b2c70aaf8540cd7f7d19328dc2e0a2a4 257 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 35 256 39.215 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 XF_1311 d71552d154a434e002dda6c16a452468 161 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 6 151 5.4E-29 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 XF_1311 d71552d154a434e002dda6c16a452468 161 PIRSF PIRSF018472 1 160 2.5E-46 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type XF_1311 d71552d154a434e002dda6c16a452468 161 Pfam PF04093 rod shape-determining protein MreD 3 152 1.2E-39 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 XF_0318 5b26237404d9d9b89ed029564a34f121 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 1.3E-8 T 14-10-2018 XF_0318 5b26237404d9d9b89ed029564a34f121 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 1.3E-8 T 14-10-2018 XF_0318 5b26237404d9d9b89ed029564a34f121 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 416 435 1.3E-8 T 14-10-2018 XF_0318 5b26237404d9d9b89ed029564a34f121 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 1.3E-8 T 14-10-2018 XF_0318 5b26237404d9d9b89ed029564a34f121 485 Pfam PF00361 Proton-conducting membrane transporter 129 422 2.7E-79 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0318 5b26237404d9d9b89ed029564a34f121 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 14 473 3.1E-141 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 XF_0318 5b26237404d9d9b89ed029564a34f121 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 11 474 18.086 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 203 219 3.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 45 60 3.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 148 172 3.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 242 263 3.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 133 145 3.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 12 34 3.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 111 119 3.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 3.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 3.4E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 140 160 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 12 317 1.1E-118 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 1.3E-39 T 14-10-2018 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 1.3E-39 T 14-10-2018 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.3E-39 T 14-10-2018 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 1.3E-39 T 14-10-2018 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 256 1.3E-39 T 14-10-2018 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 301 3.0E-45 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 Gene3D G3DSA:3.50.50.60 14 316 7.0E-121 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 SUPERFAMILY SSF51905 5 317 6.29E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1448 5b393aeaf178653b3bd7c1d545c5990b 321 Gene3D G3DSA:3.50.50.60 122 248 7.0E-121 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_0967 ba902319fa13b9455684b1fab62e6a55 669 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.1E-21 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain XF_0967 ba902319fa13b9455684b1fab62e6a55 669 SMART SM00490 460 546 3.1E-20 T 14-10-2018 IPR001650 Helicase, C-terminal XF_0967 ba902319fa13b9455684b1fab62e6a55 669 Gene3D G3DSA:3.40.50.300 1 238 6.6E-70 T 14-10-2018 XF_0967 ba902319fa13b9455684b1fab62e6a55 669 Pfam PF02151 UvrB/uvrC motif 635 665 1.3E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 XF_0967 ba902319fa13b9455684b1fab62e6a55 669 SUPERFAMILY SSF52540 36 583 8.43E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0967 ba902319fa13b9455684b1fab62e6a55 669 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 42.296 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 XF_0967 ba902319fa13b9455684b1fab62e6a55 669 SUPERFAMILY SSF46600 620 665 5.1E-12 T 14-10-2018 IPR036876 UVR domain superfamily XF_0967 ba902319fa13b9455684b1fab62e6a55 669 Gene3D G3DSA:3.40.50.300 269 414 2.8E-49 T 14-10-2018 XF_0967 ba902319fa13b9455684b1fab62e6a55 669 SMART SM00487 9 426 1.3E-25 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_0967 ba902319fa13b9455684b1fab62e6a55 669 Gene3D G3DSA:3.40.50.300 415 596 6.5E-50 T 14-10-2018 XF_0967 ba902319fa13b9455684b1fab62e6a55 669 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 XF_0967 ba902319fa13b9455684b1fab62e6a55 669 Gene3D G3DSA:4.10.860.10 613 668 5.0E-15 T 14-10-2018 XF_0967 ba902319fa13b9455684b1fab62e6a55 669 Pfam PF04851 Type III restriction enzyme, res subunit 16 92 1.1E-8 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XF_0967 ba902319fa13b9455684b1fab62e6a55 669 Pfam PF00271 Helicase conserved C-terminal domain 444 544 1.6E-18 T 14-10-2018 IPR001650 Helicase, C-terminal XF_0967 ba902319fa13b9455684b1fab62e6a55 669 SUPERFAMILY SSF52540 4 415 5.27E-127 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1954 d73f7644c47679d1599b1eeaad8d70ed 176 Gene3D G3DSA:2.30.30.40 45 155 1.6E-15 T 14-10-2018 XF_1954 d73f7644c47679d1599b1eeaad8d70ed 176 SMART SM00260 29 166 5.7E-5 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XF_1954 d73f7644c47679d1599b1eeaad8d70ed 176 SUPERFAMILY SSF50341 26 170 8.72E-27 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 XF_1954 d73f7644c47679d1599b1eeaad8d70ed 176 Pfam PF01584 CheW-like domain 35 166 5.8E-24 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XF_1954 d73f7644c47679d1599b1eeaad8d70ed 176 Gene3D G3DSA:2.40.50.180 52 118 1.6E-15 T 14-10-2018 XF_0153 e463638adb26f4014e3cc8e062ac0425 219 SUPERFAMILY SSF53271 2 202 1.85E-43 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like XF_0153 e463638adb26f4014e3cc8e062ac0425 219 Gene3D G3DSA:3.40.50.2020 1 219 1.0E-66 T 14-10-2018 XF_0153 e463638adb26f4014e3cc8e062ac0425 219 Pfam PF00156 Phosphoribosyl transferase domain 46 158 5.1E-15 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XF_0153 e463638adb26f4014e3cc8e062ac0425 219 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 219 29.4 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_0153 e463638adb26f4014e3cc8e062ac0425 219 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 189 1.8E-53 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_1456 d46fda4e5d5f74363125f79690e5ce44 209 Gene3D G3DSA:3.30.70.560 37 193 7.4E-33 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XF_1456 d46fda4e5d5f74363125f79690e5ce44 209 SUPERFAMILY SSF55083 39 189 8.11E-37 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XF_1456 d46fda4e5d5f74363125f79690e5ce44 209 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 44 169 3.2E-21 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XF_1456 d46fda4e5d5f74363125f79690e5ce44 209 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 42 169 3.5E-30 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XF_1292 a43af5378b2b426d96b36527483ce2f3 118 Hamap MF_00599 Cell division protein FtsB [ftsB]. 2 93 32.828 T 14-10-2018 IPR023081 Cell division protein FtsB XF_1292 a43af5378b2b426d96b36527483ce2f3 118 Pfam PF04977 Septum formation initiator 14 92 9.6E-29 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC XF_1751 464824a043eafcf58ce18b4e34b2666b 167 Gene3D G3DSA:2.40.100.20 51 165 8.5E-12 T 14-10-2018 XF_1751 464824a043eafcf58ce18b4e34b2666b 167 SUPERFAMILY SSF50891 51 166 3.79E-22 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily XF_2268 e8cbf6c93856291b8806c3022b4bd357 516 Gene3D G3DSA:3.30.420.40 271 515 1.0E-84 T 14-10-2018 XF_2268 e8cbf6c93856291b8806c3022b4bd357 516 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 21 511 5.0E-219 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 XF_2268 e8cbf6c93856291b8806c3022b4bd357 516 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 379 399 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 XF_2268 e8cbf6c93856291b8806c3022b4bd357 516 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 152 164 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 XF_2268 e8cbf6c93856291b8806c3022b4bd357 516 Gene3D G3DSA:3.30.420.40 17 270 2.2E-106 T 14-10-2018 XF_2268 e8cbf6c93856291b8806c3022b4bd357 516 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 278 467 3.1E-61 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 XF_2268 e8cbf6c93856291b8806c3022b4bd357 516 Hamap MF_00186 Glycerol kinase [glpK]. 20 514 58.403 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 XF_2268 e8cbf6c93856291b8806c3022b4bd357 516 SUPERFAMILY SSF53067 272 511 4.32E-80 T 14-10-2018 XF_2268 e8cbf6c93856291b8806c3022b4bd357 516 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 22 269 2.0E-81 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 XF_2268 e8cbf6c93856291b8806c3022b4bd357 516 PIRSF PIRSF000538 20 513 5.5E-175 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 XF_2268 e8cbf6c93856291b8806c3022b4bd357 516 SUPERFAMILY SSF53067 21 272 7.5E-93 T 14-10-2018 XF_1633 b936c92282c083d671070bc7fee3c769 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 14-10-2018 IPR001482 Type II/IV secretion system protein XF_1633 b936c92282c083d671070bc7fee3c769 344 Gene3D G3DSA:3.40.50.300 101 344 2.7E-103 T 14-10-2018 XF_1633 b936c92282c083d671070bc7fee3c769 344 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 3.1E-161 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 XF_1633 b936c92282c083d671070bc7fee3c769 344 SUPERFAMILY SSF52540 5 336 2.46E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1633 b936c92282c083d671070bc7fee3c769 344 Gene3D G3DSA:3.30.450.90 1 100 2.3E-35 T 14-10-2018 XF_1633 b936c92282c083d671070bc7fee3c769 344 Pfam PF00437 Type II/IV secretion system protein 12 268 1.8E-47 T 14-10-2018 IPR001482 Type II/IV secretion system protein XF_1633 b936c92282c083d671070bc7fee3c769 344 SMART SM00382 122 262 0.0012 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_0313 3ffbf0532c43213c6855aa8aeb9fdf62 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XF_0313 3ffbf0532c43213c6855aa8aeb9fdf62 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XF_0313 3ffbf0532c43213c6855aa8aeb9fdf62 163 SUPERFAMILY SSF54862 37 145 7.95E-25 T 14-10-2018 XF_0313 3ffbf0532c43213c6855aa8aeb9fdf62 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 11 160 26.648 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0313 3ffbf0532c43213c6855aa8aeb9fdf62 163 Gene3D G3DSA:3.30.70.3270 37 162 6.4E-35 T 14-10-2018 XF_0313 3ffbf0532c43213c6855aa8aeb9fdf62 163 Pfam PF12838 4Fe-4S dicluster domain 63 116 5.8E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XF_0313 3ffbf0532c43213c6855aa8aeb9fdf62 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 138 8.3E-44 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0187 5bfaf8bbc1e6b8caaeac109888eb6e5e 272 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 14 262 40.198 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 XF_0187 5bfaf8bbc1e6b8caaeac109888eb6e5e 272 Gene3D G3DSA:3.30.540.10 12 160 2.9E-43 T 14-10-2018 XF_0187 5bfaf8bbc1e6b8caaeac109888eb6e5e 272 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 92 105 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site XF_0187 5bfaf8bbc1e6b8caaeac109888eb6e5e 272 Gene3D G3DSA:3.40.190.80 161 264 3.0E-30 T 14-10-2018 XF_0187 5bfaf8bbc1e6b8caaeac109888eb6e5e 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 46 66 1.8E-10 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XF_0187 5bfaf8bbc1e6b8caaeac109888eb6e5e 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 216 240 1.8E-10 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XF_0187 5bfaf8bbc1e6b8caaeac109888eb6e5e 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 92 108 1.8E-10 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XF_0187 5bfaf8bbc1e6b8caaeac109888eb6e5e 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 68 84 1.8E-10 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XF_0187 5bfaf8bbc1e6b8caaeac109888eb6e5e 272 Pfam PF00459 Inositol monophosphatase family 19 255 2.3E-45 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XF_0187 5bfaf8bbc1e6b8caaeac109888eb6e5e 272 SUPERFAMILY SSF56655 13 263 2.09E-73 T 14-10-2018 XF_0187 5bfaf8bbc1e6b8caaeac109888eb6e5e 272 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 16 260 3.1E-86 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 XF_0187 5bfaf8bbc1e6b8caaeac109888eb6e5e 272 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 219 233 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 XF_2781 c0f01f5a72f7731befa286bde8966a29 142 SUPERFAMILY SSF54211 14 120 8.6E-22 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_2781 c0f01f5a72f7731befa286bde8966a29 142 Gene3D G3DSA:3.30.230.10 10 122 9.9E-24 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XF_2781 c0f01f5a72f7731befa286bde8966a29 142 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 19 120 2.2E-17 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XF_2781 c0f01f5a72f7731befa286bde8966a29 142 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 14 122 17.143 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XF_2781 c0f01f5a72f7731befa286bde8966a29 142 Pfam PF00825 Ribonuclease P 14 119 1.7E-22 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XF_2781 c0f01f5a72f7731befa286bde8966a29 142 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 30 119 6.0E-44 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XF_2781 c0f01f5a72f7731befa286bde8966a29 142 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 63 77 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 XF_2726 d12274ccf800dedff71c68c7ebdc001f 409 SUPERFAMILY SSF116734 5 205 5.56E-35 T 14-10-2018 XF_2726 d12274ccf800dedff71c68c7ebdc001f 409 SUPERFAMILY SSF116734 216 406 1.47E-37 T 14-10-2018 XF_2726 d12274ccf800dedff71c68c7ebdc001f 409 Pfam PF01420 Type I restriction modification DNA specificity domain 218 388 3.0E-27 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XF_2726 d12274ccf800dedff71c68c7ebdc001f 409 Pfam PF01420 Type I restriction modification DNA specificity domain 14 189 1.9E-14 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XF_2726 d12274ccf800dedff71c68c7ebdc001f 409 Gene3D G3DSA:3.90.220.20 204 381 8.9E-32 T 14-10-2018 XF_2726 d12274ccf800dedff71c68c7ebdc001f 409 Gene3D G3DSA:3.90.220.20 2 203 4.5E-31 T 14-10-2018 XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 Gene3D G3DSA:3.30.250.10 271 345 6.9E-25 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 SUPERFAMILY SSF52540 6 269 2.27E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 326 5.1E-165 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 SUPERFAMILY SSF54752 270 327 5.76E-20 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 ProSitePatterns PS00321 recA signature. 215 223 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 Hamap MF_00268 Protein RecA [recA]. 5 331 50.397 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 Gene3D G3DSA:3.40.50.300 30 270 4.7E-78 T 14-10-2018 XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 127 156 8.2E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 212 240 8.2E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 165 194 8.2E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 299 316 8.2E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 93 122 8.2E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 245 274 8.2E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 SMART SM00382 57 230 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_0123 f90e6c4c541278d6a60fbfaf42573156 347 Pfam PF00154 recA bacterial DNA recombination protein 7 270 2.0E-139 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XF_2638 fc45f41a2fe969b22e4484bfdafe88ac 185 Gene3D G3DSA:3.30.70.940 1 125 4.5E-39 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XF_2638 fc45f41a2fe969b22e4484bfdafe88ac 185 SMART SM00738 1 119 2.5E-41 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XF_2638 fc45f41a2fe969b22e4484bfdafe88ac 185 Gene3D G3DSA:2.30.30.30 126 184 1.9E-23 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 XF_2638 fc45f41a2fe969b22e4484bfdafe88ac 185 SUPERFAMILY SSF50104 129 184 6.02E-18 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily XF_2638 fc45f41a2fe969b22e4484bfdafe88ac 185 SMART SM00739 131 158 4.2E-4 T 14-10-2018 IPR005824 KOW XF_2638 fc45f41a2fe969b22e4484bfdafe88ac 185 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 4.9E-17 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XF_2638 fc45f41a2fe969b22e4484bfdafe88ac 185 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 4.9E-17 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XF_2638 fc45f41a2fe969b22e4484bfdafe88ac 185 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 4.9E-17 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XF_2638 fc45f41a2fe969b22e4484bfdafe88ac 185 Pfam PF02357 Transcription termination factor nusG 2 116 9.6E-23 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XF_2638 fc45f41a2fe969b22e4484bfdafe88ac 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 185 23.346 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XF_2638 fc45f41a2fe969b22e4484bfdafe88ac 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 184 5.1E-59 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XF_2638 fc45f41a2fe969b22e4484bfdafe88ac 185 SUPERFAMILY SSF82679 2 122 4.84E-33 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XF_2638 fc45f41a2fe969b22e4484bfdafe88ac 185 Pfam PF00467 KOW motif 134 164 2.4E-6 T 14-10-2018 IPR005824 KOW XF_2638 fc45f41a2fe969b22e4484bfdafe88ac 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site XF_2369 5da900fbda9c8cf728b1ad9f2eb230f0 467 Pfam PF02706 Chain length determinant protein 20 110 9.9E-11 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 XF_2369 5da900fbda9c8cf728b1ad9f2eb230f0 467 Pfam PF13807 G-rich domain on putative tyrosine kinase 381 453 3.1E-15 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 Gene3D G3DSA:3.40.50.140 1 129 7.7E-45 T 14-10-2018 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 SMART SM00493 1 100 3.2E-21 T 14-10-2018 IPR006171 TOPRIM domain XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 637 51.685 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 3 592 1.4E-150 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 277 291 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 Pfam PF01131 DNA topoisomerase 123 539 2.1E-108 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 SMART SM00436 99 187 3.1E-30 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 74 87 3.0E-32 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 282 291 3.0E-32 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 466 480 3.0E-32 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 353 369 3.0E-32 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 157 175 3.0E-32 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 563 595 1.1E-7 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 613 651 0.18 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 Gene3D G3DSA:1.10.460.10 130 540 4.4E-118 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 Pfam PF01751 Toprim domain 3 108 1.3E-21 T 14-10-2018 IPR006171 TOPRIM domain XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 SUPERFAMILY SSF56712 1 571 1.26E-149 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 Gene3D G3DSA:2.70.20.10 179 450 4.4E-118 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 Gene3D G3DSA:1.10.290.10 248 368 4.4E-118 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 SUPERFAMILY SSF57783 557 592 1.28E-7 T 14-10-2018 XF_a0003 b92b0068a8fb9f10bbb769bb8723c7e2 660 SMART SM00437 240 503 9.2E-77 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 XF_0906 e5e3a64ab996eb527c410a2f74d77dca 497 Pfam PF04055 Radical SAM superfamily 196 380 5.0E-26 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XF_0906 e5e3a64ab996eb527c410a2f74d77dca 497 SUPERFAMILY SSF102114 167 425 1.31E-58 T 14-10-2018 XF_0906 e5e3a64ab996eb527c410a2f74d77dca 497 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 49 494 2.8E-177 T 14-10-2018 XF_0906 e5e3a64ab996eb527c410a2f74d77dca 497 Gene3D G3DSA:3.40.50.12160 49 183 1.4E-32 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily XF_0906 e5e3a64ab996eb527c410a2f74d77dca 497 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 49 492 7.5E-144 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 XF_0906 e5e3a64ab996eb527c410a2f74d77dca 497 SMART SM00729 192 418 5.4E-54 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XF_0906 e5e3a64ab996eb527c410a2f74d77dca 497 Pfam PF00919 Uncharacterized protein family UPF0004 49 149 2.6E-28 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 XF_0906 e5e3a64ab996eb527c410a2f74d77dca 497 Pfam PF01938 TRAM domain 433 494 1.2E-18 T 14-10-2018 IPR002792 TRAM domain XF_0906 e5e3a64ab996eb527c410a2f74d77dca 497 Gene3D G3DSA:3.80.30.20 190 436 6.4E-79 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe XF_0906 e5e3a64ab996eb527c410a2f74d77dca 497 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 196 216 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 XF_0906 e5e3a64ab996eb527c410a2f74d77dca 497 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 48 495 71.054 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 XF_0576 65960f21e79e04f927bb94f69819d86f 700 Gene3D G3DSA:1.10.1380.10 93 483 3.9E-224 T 14-10-2018 XF_0576 65960f21e79e04f927bb94f69819d86f 700 Pfam PF05649 Peptidase family M13 67 444 1.3E-93 T 14-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 XF_0576 65960f21e79e04f927bb94f69819d86f 700 SUPERFAMILY SSF55486 55 700 2.49E-204 T 14-10-2018 XF_0576 65960f21e79e04f927bb94f69819d86f 700 Gene3D G3DSA:3.40.390.10 62 700 3.9E-224 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 XF_0576 65960f21e79e04f927bb94f69819d86f 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 527 543 8.8E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XF_0576 65960f21e79e04f927bb94f69819d86f 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 488 500 8.8E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XF_0576 65960f21e79e04f927bb94f69819d86f 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 506 518 8.8E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XF_0576 65960f21e79e04f927bb94f69819d86f 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 598 609 8.8E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XF_0576 65960f21e79e04f927bb94f69819d86f 700 Pfam PF01431 Peptidase family M13 496 697 3.0E-69 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 Pfam PF00072 Response regulator receiver domain 404 516 4.6E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 306 316 4.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 302 4.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 360 4.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 341 4.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 Pfam PF01627 Hpt domain 570 643 3.8E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 Gene3D G3DSA:3.40.50.2300 388 523 1.8E-34 T 14-10-2018 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 SMART SM00388 134 199 8.8E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 SUPERFAMILY SSF47226 540 653 1.44E-13 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 SMART SM00073 557 652 0.0019 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 Pfam PF00512 His Kinase A (phospho-acceptor) domain 134 199 7.8E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 SUPERFAMILY SSF47384 117 200 3.53E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 Gene3D G3DSA:3.30.565.10 198 366 5.2E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 SUPERFAMILY SSF55874 189 361 6.94E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 SMART SM00448 402 517 3.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 SUPERFAMILY SSF52172 400 522 1.18E-31 T 14-10-2018 IPR011006 CheY-like superfamily XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 246 362 9.3E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 Gene3D G3DSA:1.20.120.160 535 654 1.3E-9 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 Gene3D G3DSA:1.10.287.130 114 197 3.6E-25 T 14-10-2018 XF_1114 3b343b1a64004570eb0a7a642b7223a5 662 SMART SM00387 246 363 5.4E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_1748 cff16ae6b754e5ef1284161785868099 237 SUPERFAMILY SSF53597 2 231 8.74E-31 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XF_1748 cff16ae6b754e5ef1284161785868099 237 Pfam PF01872 RibD C-terminal domain 4 192 2.2E-12 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 XF_1748 cff16ae6b754e5ef1284161785868099 237 Gene3D G3DSA:3.40.430.10 1 233 2.5E-31 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XF_0227 28007a32e809f27471a0942751b7d830 421 SUPERFAMILY SSF81301 7 159 8.07E-39 T 14-10-2018 XF_0227 28007a32e809f27471a0942751b7d830 421 Gene3D G3DSA:1.10.3090.10 160 406 2.3E-77 T 14-10-2018 XF_0227 28007a32e809f27471a0942751b7d830 421 SUPERFAMILY SSF81891 161 371 3.27E-43 T 14-10-2018 XF_0227 28007a32e809f27471a0942751b7d830 421 Gene3D G3DSA:3.30.460.10 2 158 2.1E-57 T 14-10-2018 XF_0227 28007a32e809f27471a0942751b7d830 421 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 4 394 8.5E-144 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 XF_0227 28007a32e809f27471a0942751b7d830 421 Pfam PF12626 Polymerase A arginine-rich C-terminus 305 407 2.6E-27 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain XF_0227 28007a32e809f27471a0942751b7d830 421 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 3 419 35.913 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 XF_0227 28007a32e809f27471a0942751b7d830 421 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 189 251 2.4E-21 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XF_0227 28007a32e809f27471a0942751b7d830 421 Pfam PF01743 Poly A polymerase head domain 35 162 1.1E-35 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XF_1110 2cbf864580179545783f78861b03aa92 581 Gene3D G3DSA:3.10.310.30 318 448 6.5E-28 T 14-10-2018 XF_1110 2cbf864580179545783f78861b03aa92 581 Pfam PF01368 DHH family 50 177 1.9E-9 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 XF_1110 2cbf864580179545783f78861b03aa92 581 SUPERFAMILY SSF64182 24 453 3.14E-103 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily XF_1110 2cbf864580179545783f78861b03aa92 581 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 17 559 3.8E-131 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 XF_1110 2cbf864580179545783f78861b03aa92 581 Gene3D G3DSA:3.90.1640.30 24 313 2.9E-80 T 14-10-2018 XF_1110 2cbf864580179545783f78861b03aa92 581 Pfam PF02272 DHHA1 domain 309 441 3.9E-22 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 XF_0181 836d27f2f35bf85001d52fc4af9d9c9a 144 Gene3D G3DSA:2.40.50.100 15 144 5.8E-48 T 14-10-2018 XF_0181 836d27f2f35bf85001d52fc4af9d9c9a 144 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 17 142 2.3E-48 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 XF_0181 836d27f2f35bf85001d52fc4af9d9c9a 144 SUPERFAMILY SSF51230 17 140 8.11E-44 T 14-10-2018 IPR011053 Single hybrid motif XF_0181 836d27f2f35bf85001d52fc4af9d9c9a 144 Pfam PF01597 Glycine cleavage H-protein 21 141 9.5E-44 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate XF_0181 836d27f2f35bf85001d52fc4af9d9c9a 144 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 18 140 39.253 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 XF_0181 836d27f2f35bf85001d52fc4af9d9c9a 144 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 62 91 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XF_0083 2d6695de2a2d3c5e8c79ed3226309214 184 Gene3D G3DSA:2.60.40.1090 26 184 4.9E-33 T 14-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XF_0083 2d6695de2a2d3c5e8c79ed3226309214 184 Pfam PF16970 Type-1 fimbrial protein, A 54 184 1.9E-19 T 14-10-2018 IPR039458 Type-1 fimbrial protein, A XF_0083 2d6695de2a2d3c5e8c79ed3226309214 184 SUPERFAMILY SSF49401 29 184 4.82E-25 T 14-10-2018 IPR008966 Adhesion domain superfamily XF_2764 f80097ff453d32e5b20b93ad02200fb7 113 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 17 110 2.1E-38 T 14-10-2018 IPR014056 Addiction module killer protein, predicted XF_2764 f80097ff453d32e5b20b93ad02200fb7 113 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 27 109 3.9E-6 T 14-10-2018 IPR009241 Toxin HigB-like XF_2764 f80097ff453d32e5b20b93ad02200fb7 113 PIRSF PIRSF028744 10 113 6.4E-38 T 14-10-2018 IPR014056 Addiction module killer protein, predicted XF_0259 35fcd0d9a3d9420a27c697a20629591a 482 Pfam PF01050 Mannose-6-phosphate isomerase 327 477 1.1E-73 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 XF_0259 35fcd0d9a3d9420a27c697a20629591a 482 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 19 481 3.0E-230 T 14-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 XF_0259 35fcd0d9a3d9420a27c697a20629591a 482 Gene3D G3DSA:3.90.550.10 18 360 4.7E-118 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_0259 35fcd0d9a3d9420a27c697a20629591a 482 SUPERFAMILY SSF53448 19 295 2.69E-72 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_0259 35fcd0d9a3d9420a27c697a20629591a 482 Gene3D G3DSA:2.60.120.10 361 466 1.1E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold XF_0259 35fcd0d9a3d9420a27c697a20629591a 482 SUPERFAMILY SSF51182 198 481 3.65E-88 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily XF_0259 35fcd0d9a3d9420a27c697a20629591a 482 Pfam PF00483 Nucleotidyl transferase 21 299 4.4E-73 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 SUPERFAMILY SSF51120 1282 1439 1.2E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1229 1273 3.1E-11 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1561 1600 3.3E-10 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1063 1107 3.1E-11 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1395 1439 3.1E-11 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 857 971 3.0E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1011 947e9948512bb524a0435c385b57b6f1 1636 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1123 1141 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_1011 947e9948512bb524a0435c385b57b6f1 1636 SUPERFAMILY SSF51120 1448 1597 7.33E-26 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1011 947e9948512bb524a0435c385b57b6f1 1636 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 512 530 1.9E-6 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 952 973 1.9E-6 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1289 1307 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 1112 1165 1.3E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1011 947e9948512bb524a0435c385b57b6f1 1636 SUPERFAMILY SSF51120 1116 1273 1.07E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1284 1300 0.13 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1450 1466 0.25 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1477 1493 0.46 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1339 1355 0.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 943 959 0.041 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1174 1189 0.12 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 960 977 9.0E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 925 941 14.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1118 1134 0.25 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1007 1023 0.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1506 1521 0.12 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1136 1152 0.11 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1302 1318 0.11 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 979 995 0.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 SUPERFAMILY SSF51120 967 1107 6.28E-21 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1011 947e9948512bb524a0435c385b57b6f1 1636 PRINTS PR00313 NodO calcium binding signature 1136 1144 7.5E-10 T 14-10-2018 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 PRINTS PR00313 NodO calcium binding signature 1008 1016 7.5E-10 T 14-10-2018 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 PRINTS PR00313 NodO calcium binding signature 1154 1163 7.5E-10 T 14-10-2018 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 PRINTS PR00313 NodO calcium binding signature 958 969 7.5E-10 T 14-10-2018 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 1498 1613 1.1E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 1333 1447 8.5E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 1166 1275 9.4E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 972 1111 2.2E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1011 947e9948512bb524a0435c385b57b6f1 1636 SUPERFAMILY SSF103647 449 550 2.22E-7 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 1276 1332 6.1E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1011 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 1448 1497 1.2E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1011 947e9948512bb524a0435c385b57b6f1 1636 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1455 1473 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2324 91c8603c2c56cdecea6792139dd5357a 454 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 25 437 1.1E-112 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 XF_2324 91c8603c2c56cdecea6792139dd5357a 454 ProSitePatterns PS00104 EPSP synthase signature 1. 106 120 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XF_2324 91c8603c2c56cdecea6792139dd5357a 454 SUPERFAMILY SSF55205 21 444 2.78E-123 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 XF_2324 91c8603c2c56cdecea6792139dd5357a 454 ProSitePatterns PS00885 EPSP synthase signature 2. 358 376 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XF_2324 91c8603c2c56cdecea6792139dd5357a 454 Gene3D G3DSA:3.65.10.10 31 436 4.0E-146 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XF_2324 91c8603c2c56cdecea6792139dd5357a 454 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 27 446 31.578 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XF_2324 91c8603c2c56cdecea6792139dd5357a 454 PIRSF PIRSF000505 19 450 2.6E-116 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XF_2324 91c8603c2c56cdecea6792139dd5357a 454 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 31 441 4.1E-118 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XF_2324 91c8603c2c56cdecea6792139dd5357a 454 Gene3D G3DSA:3.65.10.10 39 248 4.0E-146 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XF_2693 6601fd8211656c85085494ab20adfc60 264 Gene3D G3DSA:3.40.50.2300 1 122 1.6E-15 T 14-10-2018 XF_2693 6601fd8211656c85085494ab20adfc60 264 SUPERFAMILY SSF52172 124 260 1.71E-24 T 14-10-2018 IPR011006 CheY-like superfamily XF_2693 6601fd8211656c85085494ab20adfc60 264 SMART SM00448 125 248 4.8E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2693 6601fd8211656c85085494ab20adfc60 264 SMART SM00448 1 113 1.1E-4 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2693 6601fd8211656c85085494ab20adfc60 264 SUPERFAMILY SSF52172 1 118 2.28E-18 T 14-10-2018 IPR011006 CheY-like superfamily XF_2693 6601fd8211656c85085494ab20adfc60 264 Pfam PF00072 Response regulator receiver domain 127 248 2.4E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2693 6601fd8211656c85085494ab20adfc60 264 Pfam PF00072 Response regulator receiver domain 1 112 7.2E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2693 6601fd8211656c85085494ab20adfc60 264 Gene3D G3DSA:3.40.50.2300 123 259 1.2E-22 T 14-10-2018 XF_0950 541fff7d09d3477e37629dae00f6486c 364 Pfam PF01872 RibD C-terminal domain 152 356 9.8E-46 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 XF_0950 541fff7d09d3477e37629dae00f6486c 364 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 XF_0950 541fff7d09d3477e37629dae00f6486c 364 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 357 1.5E-112 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 XF_0950 541fff7d09d3477e37629dae00f6486c 364 PIRSF PIRSF006769 4 361 1.2E-121 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 XF_0950 541fff7d09d3477e37629dae00f6486c 364 SUPERFAMILY SSF53597 150 360 1.13E-55 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XF_0950 541fff7d09d3477e37629dae00f6486c 364 Gene3D G3DSA:3.40.430.10 146 362 1.4E-64 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XF_0950 541fff7d09d3477e37629dae00f6486c 364 Gene3D G3DSA:3.40.140.10 3 145 1.5E-44 T 14-10-2018 XF_0950 541fff7d09d3477e37629dae00f6486c 364 SUPERFAMILY SSF53927 8 149 1.52E-46 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XF_0950 541fff7d09d3477e37629dae00f6486c 364 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 360 6.8E-53 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 XF_0950 541fff7d09d3477e37629dae00f6486c 364 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 104 2.3E-19 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF05860 haemagglutination activity domain 74 205 2.5E-33 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 106 202 1.0E-25 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 464 499 0.066 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1260 1298 0.0054 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 880 915 1.2E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 321 353 1.4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 669 705 5.9E-6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1222 1256 2.0 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1453 1478 1.3 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 353 392 5.4E-7 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 568 599 5.2E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1063 1100 2.0E-7 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 717 748 1.0 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 979 1017 1.0E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 528 558 0.0075 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 856 888 0.31 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 378 414 0.0072 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1122 1162 4.0E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 959 989 0.0036 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1300 1338 0.066 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 812 852 6.2E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 757 789 0.0012 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 918 956 3.4E-9 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1182 1214 2.5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 734 768 0.0029 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 507 539 0.0077 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 775 811 0.005 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 333 373 1.8E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 6.9E-7 T 14-10-2018 IPR024973 ESPR domain XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Gene3D G3DSA:2.160.20.10 75 397 1.1E-99 T 14-10-2018 IPR012334 Pectin lyase fold XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF05594 Haemagluttinin repeat 1208 1280 0.051 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF05594 Haemagluttinin repeat 1054 1108 0.05 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF05594 Haemagluttinin repeat 365 399 24.0 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF05594 Haemagluttinin repeat 672 735 1.0 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF05594 Haemagluttinin repeat 2063 2135 0.0064 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF05594 Haemagluttinin repeat 512 564 15.0 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF05594 Haemagluttinin repeat 773 831 5.7E-5 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF05594 Haemagluttinin repeat 948 1009 0.0034 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF05594 Haemagluttinin repeat 312 363 0.015 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF05594 Haemagluttinin repeat 1114 1202 0.27 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF05594 Haemagluttinin repeat 879 944 0.0015 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF05594 Haemagluttinin repeat 575 636 0.0037 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 SUPERFAMILY SSF51126 76 361 3.45E-61 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 SMART SM00912 87 207 4.3E-48 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF13332 Haemagluttinin repeat 2299 2365 2.9E-5 T 14-10-2018 IPR025157 Hemagglutinin repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF13332 Haemagluttinin repeat 2382 2485 0.0095 T 14-10-2018 IPR025157 Hemagglutinin repeat XF_0889 9c0e996eeb9ce522a65df9be1b41129b 3282 Pfam PF13332 Haemagluttinin repeat 2533 2712 1.1E-28 T 14-10-2018 IPR025157 Hemagglutinin repeat XF_1200 bd6418adb5ca6485d750469acf01f367 236 Gene3D G3DSA:3.10.290.10 1 54 1.5E-7 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XF_1200 bd6418adb5ca6485d750469acf01f367 236 Gene3D G3DSA:3.30.70.1560 128 210 7.0E-47 T 14-10-2018 XF_1200 bd6418adb5ca6485d750469acf01f367 236 SUPERFAMILY SSF55120 60 227 3.52E-37 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_1200 bd6418adb5ca6485d750469acf01f367 236 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 64 223 1.5E-39 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 XF_1200 bd6418adb5ca6485d750469acf01f367 236 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 XF_1200 bd6418adb5ca6485d750469acf01f367 236 Pfam PF00849 RNA pseudouridylate synthase 61 191 1.8E-12 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_1200 bd6418adb5ca6485d750469acf01f367 236 Gene3D G3DSA:3.30.70.580 61 226 7.0E-47 T 14-10-2018 XF_1589 447cc130eebaecadadf7d8fa6f0b356a 142 Gene3D G3DSA:3.40.50.1010 1 138 5.5E-37 T 14-10-2018 XF_1589 447cc130eebaecadadf7d8fa6f0b356a 142 SUPERFAMILY SSF88723 1 136 4.21E-30 T 14-10-2018 IPR029060 PIN-like domain superfamily XF_1589 447cc130eebaecadadf7d8fa6f0b356a 142 Pfam PF01850 PIN domain 2 124 3.1E-17 T 14-10-2018 IPR002716 PIN domain XF_1589 447cc130eebaecadadf7d8fa6f0b356a 142 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 135 11.848 T 14-10-2018 IPR022907 VapC family GO:0004540 XF_1439 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 204 29.693 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD XF_1439 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 Pfam PF04356 Protein of unknown function (DUF489) 7 196 2.0E-58 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD XF_1439 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 Gene3D G3DSA:1.10.3890.10 2 204 2.6E-56 T 14-10-2018 IPR035932 HflD-like superfamily XF_1439 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 10 190 1.0E-90 T 14-10-2018 XF_1439 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 SUPERFAMILY SSF101322 3 203 1.14E-59 T 14-10-2018 IPR035932 HflD-like superfamily XF_0183 60b54a132b3c739ce2156509557292c1 368 Gene3D G3DSA:3.30.70.1400 51 138 3.8E-84 T 14-10-2018 XF_0183 60b54a132b3c739ce2156509557292c1 368 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 4.8E-132 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 XF_0183 60b54a132b3c739ce2156509557292c1 368 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 44.759 T 14-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 XF_0183 60b54a132b3c739ce2156509557292c1 368 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 259 4.9E-88 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain XF_0183 60b54a132b3c739ce2156509557292c1 368 SUPERFAMILY SSF101790 274 362 3.11E-23 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal XF_0183 60b54a132b3c739ce2156509557292c1 368 Gene3D G3DSA:2.40.30.110 282 367 8.3E-28 T 14-10-2018 XF_0183 60b54a132b3c739ce2156509557292c1 368 Gene3D G3DSA:4.10.1250.10 237 279 8.2E-21 T 14-10-2018 XF_0183 60b54a132b3c739ce2156509557292c1 368 PIRSF PIRSF006487 1 366 2.9E-87 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 XF_0183 60b54a132b3c739ce2156509557292c1 368 Gene3D G3DSA:3.30.1360.120 7 236 3.8E-84 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 XF_0183 60b54a132b3c739ce2156509557292c1 368 SUPERFAMILY SSF103025 2 282 4.49E-92 T 14-10-2018 XF_0183 60b54a132b3c739ce2156509557292c1 368 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 267 352 1.7E-18 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 XF_2535 ff8dfaef16f680889fcadf6535d501c8 373 SMART SM00387 270 373 6.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_2535 ff8dfaef16f680889fcadf6535d501c8 373 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 353 6.0E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_2535 ff8dfaef16f680889fcadf6535d501c8 373 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 316 6.0E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_2535 ff8dfaef16f680889fcadf6535d501c8 373 SUPERFAMILY SSF47384 147 230 1.33E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XF_2535 ff8dfaef16f680889fcadf6535d501c8 373 SMART SM00388 164 230 4.9E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_2535 ff8dfaef16f680889fcadf6535d501c8 373 Gene3D G3DSA:3.30.565.10 232 373 6.8E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_2535 ff8dfaef16f680889fcadf6535d501c8 373 Pfam PF00512 His Kinase A (phospho-acceptor) domain 166 230 3.9E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_2535 ff8dfaef16f680889fcadf6535d501c8 373 SUPERFAMILY SSF55874 234 371 1.23E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_2535 ff8dfaef16f680889fcadf6535d501c8 373 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 273 364 9.7E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_2535 ff8dfaef16f680889fcadf6535d501c8 373 Gene3D G3DSA:1.10.287.130 113 230 9.6E-21 T 14-10-2018 XF_0798 fe434def4e7b25e28de2422b5abff431 477 SUPERFAMILY SSF53244 319 467 1.34E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XF_0798 fe434def4e7b25e28de2422b5abff431 477 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 18 467 1.6E-160 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_0798 fe434def4e7b25e28de2422b5abff431 477 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 473 42.787 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_0798 fe434def4e7b25e28de2422b5abff431 477 Gene3D G3DSA:3.40.1190.10 104 316 2.2E-81 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XF_0798 fe434def4e7b25e28de2422b5abff431 477 SUPERFAMILY SSF53623 101 317 1.31E-70 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XF_0798 fe434def4e7b25e28de2422b5abff431 477 Gene3D G3DSA:3.40.50.720 17 102 7.4E-31 T 14-10-2018 XF_0798 fe434def4e7b25e28de2422b5abff431 477 Pfam PF01225 Mur ligase family, catalytic domain 18 114 1.2E-25 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XF_0798 fe434def4e7b25e28de2422b5abff431 477 Pfam PF08245 Mur ligase middle domain 120 299 1.7E-29 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XF_0798 fe434def4e7b25e28de2422b5abff431 477 SUPERFAMILY SSF51984 17 102 1.23E-26 T 14-10-2018 XF_0798 fe434def4e7b25e28de2422b5abff431 477 Gene3D G3DSA:3.90.190.20 317 472 6.4E-44 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XF_0798 fe434def4e7b25e28de2422b5abff431 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 335 410 7.6E-18 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2094 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82714 182 272 3.27E-23 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2094 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:3.30.70.1430 567 666 0.0 T 14-10-2018 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 14-10-2018 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:3.30.70.1440 667 865 0.0 T 14-10-2018 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 14-10-2018 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:1.20.1640.10 513 1025 0.0 T 14-10-2018 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:3.30.2090.10 717 812 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2094 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.8E-100 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.8E-100 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 617 631 1.8E-100 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.8E-100 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.8E-100 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.8E-100 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.8E-100 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 1.8E-100 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.8E-100 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82693 135 330 4.39E-22 T 14-10-2018 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82693 563 664 1.41E-28 T 14-10-2018 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82866 296 497 5.75E-47 T 14-10-2018 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82866 832 1028 8.89E-42 T 14-10-2018 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1040 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82714 716 808 3.14E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2094 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82693 665 858 2.2E-23 T 14-10-2018 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:3.30.70.1430 38 820 0.0 T 14-10-2018 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2094 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82693 38 132 1.15E-27 T 14-10-2018 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 18 319 2.7E-82 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 64 71 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 171 317 1.1E-23 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 17 321 38.145 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 18 161 9.6E-35 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 Gene3D G3DSA:3.40.50.1370 18 317 1.4E-83 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 SUPERFAMILY SSF53671 16 320 2.75E-87 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 235 244 3.8E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 300 314 3.8E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 276 281 3.8E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 149 166 3.8E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 92 101 3.8E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 PRINTS PR00101 Aspartate carbamoyltransferase signature 54 76 3.8E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 Gene3D G3DSA:3.40.50.1370 150 306 1.4E-83 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 284 307 2.6E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 150 161 2.6E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 281 2.6E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XF_2226 16d2b99485a5eb0d5a57780fa4ef7d33 322 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 64 83 2.6E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XF_2294 9fb492332fcb249d5ee0a9027beaeb80 242 Pfam PF04383 KilA-N domain 28 125 2.6E-13 T 14-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding XF_2294 9fb492332fcb249d5ee0a9027beaeb80 242 SMART SM01252 25 131 2.4E-26 T 14-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding XF_1383 d819dd4b2d68e57f0aee89bd03f2963c 1478 Pfam PF00271 Helicase conserved C-terminal domain 331 455 1.0E-10 T 14-10-2018 IPR001650 Helicase, C-terminal XF_1383 d819dd4b2d68e57f0aee89bd03f2963c 1478 Pfam PF04408 Helicase associated domain (HA2) 542 615 1.5E-17 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 XF_1383 d819dd4b2d68e57f0aee89bd03f2963c 1478 SUPERFAMILY SSF52540 89 656 1.15E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1383 d819dd4b2d68e57f0aee89bd03f2963c 1478 Gene3D G3DSA:1.20.120.1080 522 621 8.7E-20 T 14-10-2018 XF_1383 d819dd4b2d68e57f0aee89bd03f2963c 1478 Gene3D G3DSA:3.40.50.300 45 264 5.4E-77 T 14-10-2018 XF_1383 d819dd4b2d68e57f0aee89bd03f2963c 1478 Pfam PF00270 DEAD/DEAH box helicase 104 245 1.0E-6 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XF_1383 d819dd4b2d68e57f0aee89bd03f2963c 1478 SMART SM00487 84 271 5.4E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_1383 d819dd4b2d68e57f0aee89bd03f2963c 1478 SMART SM00382 104 422 9.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1383 d819dd4b2d68e57f0aee89bd03f2963c 1478 Pfam PF11898 Domain of unknown function (DUF3418) 899 1474 8.0E-169 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal XF_1383 d819dd4b2d68e57f0aee89bd03f2963c 1478 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 809 883 2.9E-13 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 XF_1383 d819dd4b2d68e57f0aee89bd03f2963c 1478 SMART SM00847 539 629 2.4E-32 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 XF_1383 d819dd4b2d68e57f0aee89bd03f2963c 1478 Gene3D G3DSA:3.40.50.300 313 473 1.9E-53 T 14-10-2018 XF_1383 d819dd4b2d68e57f0aee89bd03f2963c 1478 SMART SM00490 356 456 2.2E-13 T 14-10-2018 IPR001650 Helicase, C-terminal XF_1490 1350e2d4852db8d9ede3af96b84e3f75 159 Pfam PF01047 MarR family 46 101 7.4E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_1490 1350e2d4852db8d9ede3af96b84e3f75 159 Gene3D G3DSA:1.10.10.10 1 159 4.8E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1490 1350e2d4852db8d9ede3af96b84e3f75 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 3.4E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_1490 1350e2d4852db8d9ede3af96b84e3f75 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 3.4E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_1490 1350e2d4852db8d9ede3af96b84e3f75 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 3.4E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_1490 1350e2d4852db8d9ede3af96b84e3f75 159 SMART SM00347 37 137 1.0E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_1490 1350e2d4852db8d9ede3af96b84e3f75 159 SUPERFAMILY SSF46785 10 149 2.65E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_2501 bc3027626499b6e76cff20564811b261 193 SUPERFAMILY SSF46955 26 77 2.56E-8 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily XF_2501 bc3027626499b6e76cff20564811b261 193 Gene3D G3DSA:1.10.10.10 23 90 5.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_2501 bc3027626499b6e76cff20564811b261 193 Pfam PF07471 Phage DNA packaging protein Nu1 23 172 7.1E-53 T 14-10-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit XF_0710 bc3027626499b6e76cff20564811b261 193 SUPERFAMILY SSF46955 26 77 2.56E-8 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily XF_0710 bc3027626499b6e76cff20564811b261 193 Gene3D G3DSA:1.10.10.10 23 90 5.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_0710 bc3027626499b6e76cff20564811b261 193 Pfam PF07471 Phage DNA packaging protein Nu1 23 172 7.1E-53 T 14-10-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit XF_1094 bf166096bf4d0ac249c68884b73357f7 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 195 6.1E-44 T 14-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 XF_1094 bf166096bf4d0ac249c68884b73357f7 199 Gene3D G3DSA:3.40.50.360 1 196 3.8E-60 T 14-10-2018 IPR029039 Flavoprotein-like superfamily XF_1094 bf166096bf4d0ac249c68884b73357f7 199 Pfam PF03358 NADPH-dependent FMN reductase 65 130 9.0E-9 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 XF_1094 bf166096bf4d0ac249c68884b73357f7 199 SUPERFAMILY SSF52218 1 195 5.34E-55 T 14-10-2018 IPR029039 Flavoprotein-like superfamily XF_2061 8238a2c074e4d3bb3775f1460efce5e6 1371 Pfam PF08401 Domain of unknown function (DUF1738) 220 335 2.2E-30 T 14-10-2018 IPR013610 Domain of unknown function DUF1738 XF_2061 8238a2c074e4d3bb3775f1460efce5e6 1371 Pfam PF13662 Toprim domain 1220 1292 1.0E-8 T 14-10-2018 IPR006171 TOPRIM domain XF_2061 8238a2c074e4d3bb3775f1460efce5e6 1371 SMART SM00493 1219 1297 3.2E-4 T 14-10-2018 IPR006171 TOPRIM domain XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 SMART SM00387 288 398 3.2E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 395 7.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 352 7.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 376 7.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 338 7.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 Gene3D G3DSA:3.30.565.10 243 401 1.2E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 Gene3D G3DSA:1.10.287.130 146 242 1.0E-12 T 14-10-2018 XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 289 397 9.0E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 Pfam PF12860 PAS fold 32 145 2.7E-41 T 14-10-2018 XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 Gene3D G3DSA:3.40.50.2300 423 545 8.8E-14 T 14-10-2018 XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 Pfam PF00072 Response regulator receiver domain 427 535 4.1E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 SMART SM00448 425 537 1.4E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 SUPERFAMILY SSF52172 426 541 1.01E-14 T 14-10-2018 IPR011006 CheY-like superfamily XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 SUPERFAMILY SSF55785 19 139 1.63E-6 T 14-10-2018 IPR035965 PAS domain superfamily XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 SMART SM00388 179 244 5.5E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 Pfam PF00512 His Kinase A (phospho-acceptor) domain 180 244 5.1E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 SUPERFAMILY SSF55874 234 397 6.02E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 SUPERFAMILY SSF47384 165 245 1.71E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XF_0973 325289655a2eb21a8b8c6be30632ac2b 545 Gene3D G3DSA:3.30.450.20 18 145 1.1E-10 T 14-10-2018 XF_2295 902bc0e88b2daed9055f194f849a3836 470 SUPERFAMILY SSF52540 117 396 3.19E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2295 902bc0e88b2daed9055f194f849a3836 470 Gene3D G3DSA:3.40.50.300 253 400 3.9E-5 T 14-10-2018 XF_2295 902bc0e88b2daed9055f194f849a3836 470 Pfam PF00176 SNF2 family N-terminal domain 25 260 1.9E-15 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 XF_2295 902bc0e88b2daed9055f194f849a3836 470 SUPERFAMILY SSF52540 2 202 2.33E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2295 902bc0e88b2daed9055f194f849a3836 470 SMART SM00487 2 188 5.8E-7 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_2295 902bc0e88b2daed9055f194f849a3836 470 Gene3D G3DSA:3.40.50.10810 4 228 3.0E-23 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily XF_2227 14e52355ebde8466d9b02035f4e957cb 155 Gene3D G3DSA:3.30.420.140 10 147 1.3E-33 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 XF_2227 14e52355ebde8466d9b02035f4e957cb 155 SMART SM00732 11 111 7.9E-30 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 XF_2227 14e52355ebde8466d9b02035f4e957cb 155 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 14 145 2.4E-28 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 XF_2227 14e52355ebde8466d9b02035f4e957cb 155 SUPERFAMILY SSF53098 11 146 6.68E-31 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily XF_2227 14e52355ebde8466d9b02035f4e957cb 155 Pfam PF03652 Holliday junction resolvase 12 146 2.2E-34 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 XF_2227 14e52355ebde8466d9b02035f4e957cb 155 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 11 149 20.632 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 XF_2099 fd5d7b82e29f5515f2dd4f635d6fc732 295 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 5 265 29.706 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 XF_2099 fd5d7b82e29f5515f2dd4f635d6fc732 295 SUPERFAMILY SSF53335 10 206 3.35E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_2099 fd5d7b82e29f5515f2dd4f635d6fc732 295 Gene3D G3DSA:3.40.50.150 11 172 1.0E-31 T 14-10-2018 XF_2099 fd5d7b82e29f5515f2dd4f635d6fc732 295 Pfam PF08241 Methyltransferase domain 51 147 3.1E-19 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 XF_2099 fd5d7b82e29f5515f2dd4f635d6fc732 295 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 13 264 7.5E-68 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 XF_1186 fad06228d1bb1dbe01099c9bf8927476 431 PIRSF PIRSF003095 1 431 8.6E-102 T 14-10-2018 IPR005215 Trigger factor GO:0015031 XF_1186 fad06228d1bb1dbe01099c9bf8927476 431 Gene3D G3DSA:3.30.70.1050 1 111 3.2E-29 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 XF_1186 fad06228d1bb1dbe01099c9bf8927476 431 Gene3D G3DSA:3.10.50.40 147 243 2.2E-62 T 14-10-2018 XF_1186 fad06228d1bb1dbe01099c9bf8927476 431 Gene3D G3DSA:1.10.3120.10 112 417 2.2E-62 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 XF_1186 fad06228d1bb1dbe01099c9bf8927476 431 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 260 413 4.2E-34 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 XF_1186 fad06228d1bb1dbe01099c9bf8927476 431 Hamap MF_00303 Trigger factor [tig]. 1 420 16.918 T 14-10-2018 IPR005215 Trigger factor GO:0015031 XF_1186 fad06228d1bb1dbe01099c9bf8927476 431 Pfam PF05697 Bacterial trigger factor protein (TF) 1 141 3.4E-32 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 XF_1186 fad06228d1bb1dbe01099c9bf8927476 431 SUPERFAMILY SSF109998 245 429 4.51E-34 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily XF_1186 fad06228d1bb1dbe01099c9bf8927476 431 TIGRFAM TIGR00115 tig: trigger factor 11 412 3.1E-96 T 14-10-2018 IPR005215 Trigger factor GO:0015031 XF_1186 fad06228d1bb1dbe01099c9bf8927476 431 SUPERFAMILY SSF102735 1 124 1.83E-28 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 XF_1186 fad06228d1bb1dbe01099c9bf8927476 431 SUPERFAMILY SSF54534 129 242 3.93E-14 T 14-10-2018 XF_0306 08730ab3918aebe1bb232791e5bcc52f 191 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 45 184 3.6E-76 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0306 08730ab3918aebe1bb232791e5bcc52f 191 SUPERFAMILY SSF56770 42 186 3.53E-66 T 14-10-2018 XF_0306 08730ab3918aebe1bb232791e5bcc52f 191 Gene3D G3DSA:3.40.50.12280 29 191 1.6E-78 T 14-10-2018 XF_0306 08730ab3918aebe1bb232791e5bcc52f 191 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 70 179 6.5E-23 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0306 08730ab3918aebe1bb232791e5bcc52f 191 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 151 167 - T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0306 08730ab3918aebe1bb232791e5bcc52f 191 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 34 184 41.238 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_1985 05a19f46646a06cc1f685f9c8168f758 249 SMART SM00967 7 83 1.1E-12 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 XF_1985 05a19f46646a06cc1f685f9c8168f758 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 6 246 1.3E-70 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 XF_1985 05a19f46646a06cc1f685f9c8168f758 249 Gene3D G3DSA:3.40.1280.10 81 247 3.6E-58 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XF_1985 05a19f46646a06cc1f685f9c8168f758 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 5 247 39.451 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB XF_1985 05a19f46646a06cc1f685f9c8168f758 249 Pfam PF00588 SpoU rRNA Methylase family 100 239 6.8E-39 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 XF_1985 05a19f46646a06cc1f685f9c8168f758 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 81 1.4E-11 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 XF_1985 05a19f46646a06cc1f685f9c8168f758 249 Gene3D G3DSA:3.30.1330.30 1 78 3.0E-15 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like XF_1985 05a19f46646a06cc1f685f9c8168f758 249 SUPERFAMILY SSF55315 1 76 1.07E-14 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like XF_1985 05a19f46646a06cc1f685f9c8168f758 249 SUPERFAMILY SSF75217 75 247 1.44E-48 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases XF_1146 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.6E-18 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1146 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 133 148 1.6E-18 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1146 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 72 83 1.6E-18 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1146 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 148 166 1.6E-18 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1146 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 83 97 1.6E-18 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1146 c7c0ad048e3edd0a70bd98e7ef724338 175 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 173 3.7E-34 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1146 c7c0ad048e3edd0a70bd98e7ef724338 175 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 173 2.4E-43 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1146 c7c0ad048e3edd0a70bd98e7ef724338 175 Gene3D G3DSA:1.10.520.20 2 104 3.3E-21 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1146 c7c0ad048e3edd0a70bd98e7ef724338 175 SUPERFAMILY SSF47928 3 103 2.35E-19 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1146 c7c0ad048e3edd0a70bd98e7ef724338 175 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 175 17.241 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1621 29b25cda1f0a67fdb63834b0195f79da 455 Pfam PF00144 Beta-lactamase 68 395 2.4E-64 T 14-10-2018 IPR001466 Beta-lactamase-related XF_1621 29b25cda1f0a67fdb63834b0195f79da 455 SUPERFAMILY SSF56601 62 402 2.47E-74 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XF_1621 29b25cda1f0a67fdb63834b0195f79da 455 Gene3D G3DSA:3.40.710.10 57 396 3.4E-77 T 14-10-2018 XF_0231 33333c36e83503f88d209e7fae369503 142 SUPERFAMILY SSF50692 17 137 1.74E-45 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily XF_0231 33333c36e83503f88d209e7fae369503 142 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 142 60.615 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XF_0231 33333c36e83503f88d209e7fae369503 142 Pfam PF02261 Aspartate decarboxylase 17 130 5.9E-47 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XF_0231 33333c36e83503f88d209e7fae369503 142 PIRSF PIRSF006246 17 141 1.0E-46 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XF_0231 33333c36e83503f88d209e7fae369503 142 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 17 142 3.7E-48 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XF_0231 33333c36e83503f88d209e7fae369503 142 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 21 138 1.0E-63 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XF_0231 33333c36e83503f88d209e7fae369503 142 Gene3D G3DSA:2.40.40.20 17 142 5.5E-53 T 14-10-2018 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SUPERFAMILY SSF47807 166 280 2.09E-31 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 TIGRFAM TIGR00593 pola: DNA polymerase I 4 923 2.8E-261 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Pfam PF00476 DNA polymerase family A 543 921 1.1E-142 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SMART SM00482 679 887 1.1E-99 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:1.20.1060.10 536 651 3.9E-38 T 14-10-2018 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:1.10.150.20 702 845 1.2E-104 T 14-10-2018 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SUPERFAMILY SSF56672 518 923 5.89E-149 T 14-10-2018 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SMART SM00279 168 203 6.6E-13 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:3.30.70.370 657 919 1.2E-104 T 14-10-2018 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 ProSitePatterns PS00447 DNA polymerase family A signature. 747 766 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:3.30.420.10 321 534 1.1E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:1.10.150.20 169 241 3.3E-85 T 14-10-2018 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:3.40.50.1010 4 272 3.3E-85 T 14-10-2018 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SMART SM00474 323 510 1.1E-28 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 165 8.7E-44 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Pfam PF01612 3'-5' exonuclease 323 509 6.7E-31 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 648 670 1.8E-69 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 838 854 1.8E-69 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 716 1.8E-69 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 1.8E-69 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 747 772 1.8E-69 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 723 736 1.8E-69 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 671 686 1.8E-69 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 784 795 1.8E-69 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SUPERFAMILY SSF88723 1 165 1.79E-48 T 14-10-2018 IPR029060 PIN-like domain superfamily XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 260 1.1E-26 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SUPERFAMILY SSF53098 320 509 8.22E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily XF_1103 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SMART SM00475 2 256 9.1E-103 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 XF_2153 693349148e7a041cca2e14a17e654618 259 SUPERFAMILY SSF56112 56 229 2.56E-19 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily XF_2153 693349148e7a041cca2e14a17e654618 259 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 50 251 8.8E-75 T 14-10-2018 XF_2153 693349148e7a041cca2e14a17e654618 259 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 20 253 39.203 T 14-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 XF_2153 693349148e7a041cca2e14a17e654618 259 Gene3D G3DSA:1.10.510.10 158 256 6.6E-11 T 14-10-2018 XF_2556 bb2e0284d5c303a43213ef6336e73497 837 SMART SM00292 757 834 2.4E-10 T 14-10-2018 IPR001357 BRCT domain XF_2556 bb2e0284d5c303a43213ef6336e73497 837 SUPERFAMILY SSF52113 758 832 1.4E-14 T 14-10-2018 IPR036420 BRCT domain superfamily XF_2556 bb2e0284d5c303a43213ef6336e73497 837 Pfam PF12826 Helix-hairpin-helix motif 582 645 1.7E-13 T 14-10-2018 XF_2556 bb2e0284d5c303a43213ef6336e73497 837 Hamap MF_01588 DNA ligase [ligA]. 10 831 49.644 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 XF_2556 bb2e0284d5c303a43213ef6336e73497 837 SMART SM00532 11 455 2.1E-247 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 XF_2556 bb2e0284d5c303a43213ef6336e73497 837 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 14 325 9.0E-120 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 XF_2556 bb2e0284d5c303a43213ef6336e73497 837 Gene3D G3DSA:1.10.287.610 11 76 3.7E-25 T 14-10-2018 XF_2556 bb2e0284d5c303a43213ef6336e73497 837 Gene3D G3DSA:3.40.50.10190 747 833 1.2E-22 T 14-10-2018 IPR036420 BRCT domain superfamily XF_2556 bb2e0284d5c303a43213ef6336e73497 837 Gene3D G3DSA:3.30.470.90 77 324 1.2E-92 T 14-10-2018 XF_2556 bb2e0284d5c303a43213ef6336e73497 837 Gene3D G3DSA:1.10.150.20 439 506 5.2E-19 T 14-10-2018 XF_2556 bb2e0284d5c303a43213ef6336e73497 837 Gene3D G3DSA:2.40.50.140 325 397 4.3E-32 T 14-10-2018 XF_2556 bb2e0284d5c303a43213ef6336e73497 837 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 20 504 1.0E-187 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 XF_2556 bb2e0284d5c303a43213ef6336e73497 837 SUPERFAMILY SSF56091 11 323 1.17E-113 T 14-10-2018 XF_2556 bb2e0284d5c303a43213ef6336e73497 837 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 328 403 3.8E-33 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 XF_2556 bb2e0284d5c303a43213ef6336e73497 837 SUPERFAMILY SSF50249 325 404 3.08E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2556 bb2e0284d5c303a43213ef6336e73497 837 Gene3D G3DSA:2.20.70.80 398 438 3.5E-14 T 14-10-2018 XF_2556 bb2e0284d5c303a43213ef6336e73497 837 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 122 151 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site XF_2556 bb2e0284d5c303a43213ef6336e73497 837 SUPERFAMILY SSF47781 668 740 5.08E-8 T 14-10-2018 IPR010994 RuvA domain 2-like XF_2556 bb2e0284d5c303a43213ef6336e73497 837 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 759 829 2.6E-10 T 14-10-2018 IPR001357 BRCT domain XF_2556 bb2e0284d5c303a43213ef6336e73497 837 SUPERFAMILY SSF47781 411 656 2.45E-48 T 14-10-2018 IPR010994 RuvA domain 2-like XF_2556 bb2e0284d5c303a43213ef6336e73497 837 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 415 441 1.3E-9 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 XF_2556 bb2e0284d5c303a43213ef6336e73497 837 Gene3D G3DSA:1.10.150.20 578 658 5.4E-20 T 14-10-2018 XF_2243 367524109a27f1b9ea4763fffd333d09 602 Pfam PF06421 GTP-binding protein LepA C-terminus 492 598 1.0E-51 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal XF_2243 367524109a27f1b9ea4763fffd333d09 602 SMART SM00838 403 491 0.0019 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like XF_2243 367524109a27f1b9ea4763fffd333d09 602 TIGRFAM TIGR01393 lepA: elongation factor 4 8 600 9.8E-293 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 XF_2243 367524109a27f1b9ea4763fffd333d09 602 Pfam PF03144 Elongation factor Tu domain 2 210 280 1.0E-7 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XF_2243 367524109a27f1b9ea4763fffd333d09 602 Gene3D G3DSA:3.30.70.3380 373 483 7.1E-38 T 14-10-2018 XF_2243 367524109a27f1b9ea4763fffd333d09 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site XF_2243 367524109a27f1b9ea4763fffd333d09 602 Pfam PF00009 Elongation factor Tu GTP binding domain 8 186 1.3E-51 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2243 367524109a27f1b9ea4763fffd333d09 602 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2243 367524109a27f1b9ea4763fffd333d09 602 PRINTS PR00315 GTP-binding elongation factor signature 11 24 2.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2243 367524109a27f1b9ea4763fffd333d09 602 PRINTS PR00315 GTP-binding elongation factor signature 79 89 2.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2243 367524109a27f1b9ea4763fffd333d09 602 PRINTS PR00315 GTP-binding elongation factor signature 54 62 2.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2243 367524109a27f1b9ea4763fffd333d09 602 PRINTS PR00315 GTP-binding elongation factor signature 95 106 2.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2243 367524109a27f1b9ea4763fffd333d09 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 150 2.2E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XF_2243 367524109a27f1b9ea4763fffd333d09 602 SUPERFAMILY SSF54980 404 498 1.34E-23 T 14-10-2018 IPR035647 EF-G domain III/V-like XF_2243 367524109a27f1b9ea4763fffd333d09 602 Pfam PF00679 Elongation factor G C-terminus 404 484 4.2E-19 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like XF_2243 367524109a27f1b9ea4763fffd333d09 602 Gene3D G3DSA:3.30.70.870 291 372 1.9E-36 T 14-10-2018 XF_2243 367524109a27f1b9ea4763fffd333d09 602 SUPERFAMILY SSF52540 5 206 8.37E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2243 367524109a27f1b9ea4763fffd333d09 602 Gene3D G3DSA:3.40.50.300 6 190 3.1E-70 T 14-10-2018 XF_2243 367524109a27f1b9ea4763fffd333d09 602 SUPERFAMILY SSF50447 171 293 6.82E-27 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XF_2243 367524109a27f1b9ea4763fffd333d09 602 Gene3D G3DSA:2.40.30.10 192 290 3.8E-30 T 14-10-2018 XF_2243 367524109a27f1b9ea4763fffd333d09 602 Gene3D G3DSA:3.30.70.2570 485 558 3.0E-32 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily XF_2243 367524109a27f1b9ea4763fffd333d09 602 SUPERFAMILY SSF54980 297 375 6.83E-19 T 14-10-2018 IPR035647 EF-G domain III/V-like XF_2243 367524109a27f1b9ea4763fffd333d09 602 Hamap MF_00071 Elongation factor 4 [lepA]. 1 602 294.058 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 XF_1176 e1705667dc5d42bb1449ee39f0f87ca6 332 Gene3D G3DSA:3.30.1360.10 17 227 1.0E-78 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_1176 e1705667dc5d42bb1449ee39f0f87ca6 332 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 325 2.0E-34 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_1176 e1705667dc5d42bb1449ee39f0f87ca6 332 SUPERFAMILY SSF56553 53 177 4.19E-41 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_1176 e1705667dc5d42bb1449ee39f0f87ca6 332 Gene3D G3DSA:1.10.150.20 245 327 6.4E-34 T 14-10-2018 XF_1176 e1705667dc5d42bb1449ee39f0f87ca6 332 Gene3D G3DSA:2.170.120.12 53 176 1.0E-78 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_1176 e1705667dc5d42bb1449ee39f0f87ca6 332 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 314 2.8E-104 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_1176 e1705667dc5d42bb1449ee39f0f87ca6 332 SMART SM00662 23 233 1.2E-103 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_1176 e1705667dc5d42bb1449ee39f0f87ca6 332 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 307 2.0E-23 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_1176 e1705667dc5d42bb1449ee39f0f87ca6 332 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 33.482 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_1176 e1705667dc5d42bb1449ee39f0f87ca6 332 SUPERFAMILY SSF55257 10 232 9.81E-31 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_1176 e1705667dc5d42bb1449ee39f0f87ca6 332 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 3.0E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_1176 e1705667dc5d42bb1449ee39f0f87ca6 332 SUPERFAMILY SSF47789 250 323 1.18E-24 T 14-10-2018 XF_1176 e1705667dc5d42bb1449ee39f0f87ca6 332 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 154 5.0E-23 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2313 0f302f423751cf7247cc59bd1de0d665 243 SUPERFAMILY SSF53335 9 239 5.07E-51 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_2313 0f302f423751cf7247cc59bd1de0d665 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 179 196 2.8E-28 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XF_2313 0f302f423751cf7247cc59bd1de0d665 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 197 215 2.8E-28 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XF_2313 0f302f423751cf7247cc59bd1de0d665 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 220 240 2.8E-28 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XF_2313 0f302f423751cf7247cc59bd1de0d665 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 27 41 2.8E-28 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XF_2313 0f302f423751cf7247cc59bd1de0d665 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 84 104 2.8E-28 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XF_2313 0f302f423751cf7247cc59bd1de0d665 243 Gene3D G3DSA:3.40.50.150 9 240 6.6E-49 T 14-10-2018 XF_2313 0f302f423751cf7247cc59bd1de0d665 243 Pfam PF01555 DNA methylase 176 236 6.0E-17 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XF_2313 0f302f423751cf7247cc59bd1de0d665 243 Pfam PF01555 DNA methylase 28 151 2.7E-11 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XF_2313 0f302f423751cf7247cc59bd1de0d665 243 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 31 37 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XF_0823 1745312d269e772d21e1f5447f873958 500 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 115 497 38.196 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0823 1745312d269e772d21e1f5447f873958 500 Gene3D G3DSA:3.40.50.1260 274 487 6.7E-143 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0823 1745312d269e772d21e1f5447f873958 500 PRINTS PR00477 Phosphoglycerate kinase family signature 241 263 2.8E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0823 1745312d269e772d21e1f5447f873958 500 PRINTS PR00477 Phosphoglycerate kinase family signature 140 162 2.8E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0823 1745312d269e772d21e1f5447f873958 500 PRINTS PR00477 Phosphoglycerate kinase family signature 213 228 2.8E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0823 1745312d269e772d21e1f5447f873958 500 PRINTS PR00477 Phosphoglycerate kinase family signature 295 314 2.8E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0823 1745312d269e772d21e1f5447f873958 500 PRINTS PR00477 Phosphoglycerate kinase family signature 272 294 2.8E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0823 1745312d269e772d21e1f5447f873958 500 PRINTS PR00477 Phosphoglycerate kinase family signature 417 442 2.8E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0823 1745312d269e772d21e1f5447f873958 500 PRINTS PR00477 Phosphoglycerate kinase family signature 450 461 2.8E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0823 1745312d269e772d21e1f5447f873958 500 PRINTS PR00477 Phosphoglycerate kinase family signature 119 135 2.8E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0823 1745312d269e772d21e1f5447f873958 500 PRINTS PR00477 Phosphoglycerate kinase family signature 473 490 2.8E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0823 1745312d269e772d21e1f5447f873958 500 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 124 134 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0823 1745312d269e772d21e1f5447f873958 500 Pfam PF00162 Phosphoglycerate kinase 115 487 3.1E-137 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0823 1745312d269e772d21e1f5447f873958 500 Gene3D G3DSA:3.40.50.1260 117 495 6.7E-143 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0823 1745312d269e772d21e1f5447f873958 500 SUPERFAMILY SSF53748 112 496 1.53E-141 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_1145 114c3cafce5c686aeecba8df93166db8 515 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 384 509 8.9E-46 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1145 114c3cafce5c686aeecba8df93166db8 515 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 512 1.1E-246 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1145 114c3cafce5c686aeecba8df93166db8 515 SUPERFAMILY SSF50615 12 96 4.12E-26 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XF_1145 114c3cafce5c686aeecba8df93166db8 515 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XF_1145 114c3cafce5c686aeecba8df93166db8 515 Gene3D G3DSA:3.40.50.300 96 384 2.6E-129 T 14-10-2018 XF_1145 114c3cafce5c686aeecba8df93166db8 515 Gene3D G3DSA:1.20.150.20 385 515 1.4E-47 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1145 114c3cafce5c686aeecba8df93166db8 515 SUPERFAMILY SSF52540 98 383 2.92E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1145 114c3cafce5c686aeecba8df93166db8 515 SUPERFAMILY SSF47917 385 512 1.83E-46 T 14-10-2018 XF_1145 114c3cafce5c686aeecba8df93166db8 515 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 377 6.4E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XF_1145 114c3cafce5c686aeecba8df93166db8 515 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 94 1.0E-12 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XF_1145 114c3cafce5c686aeecba8df93166db8 515 Gene3D G3DSA:2.40.30.20 3 95 1.9E-30 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XF_1145 114c3cafce5c686aeecba8df93166db8 515 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 514 49.393 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1834 3151faf6370ee0cf18f43464e8034477 154 SUPERFAMILY SSF52833 1 122 3.55E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_1834 3151faf6370ee0cf18f43464e8034477 154 Gene3D G3DSA:3.40.30.10 16 148 4.7E-38 T 14-10-2018 XF_1834 3151faf6370ee0cf18f43464e8034477 154 Pfam PF13899 Thioredoxin-like 30 114 5.2E-15 T 14-10-2018 XF_0661 9e8d06c38ab5dd2d21c6edee658b0b47 291 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site XF_0661 9e8d06c38ab5dd2d21c6edee658b0b47 291 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 210 222 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site XF_0661 9e8d06c38ab5dd2d21c6edee658b0b47 291 SUPERFAMILY SSF48576 5 284 9.71E-82 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily XF_0661 9e8d06c38ab5dd2d21c6edee658b0b47 291 Pfam PF00348 Polyprenyl synthetase 29 255 4.4E-54 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 XF_0661 9e8d06c38ab5dd2d21c6edee658b0b47 291 Gene3D G3DSA:1.10.600.10 2 288 1.9E-89 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily XF_0303 e64ffd9b5cbead128523e1ec20c1792a 249 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0303 e64ffd9b5cbead128523e1ec20c1792a 249 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 247 56.094 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0303 e64ffd9b5cbead128523e1ec20c1792a 249 Gene3D G3DSA:3.20.20.70 1 249 9.0E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_0303 e64ffd9b5cbead128523e1ec20c1792a 249 Pfam PF00121 Triosephosphate isomerase 4 244 3.9E-87 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0303 e64ffd9b5cbead128523e1ec20c1792a 249 SUPERFAMILY SSF51351 1 247 1.2E-82 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0303 e64ffd9b5cbead128523e1ec20c1792a 249 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 6.9E-59 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_2209 731108650fc6c89c1007e4ff1254096f 218 Gene3D G3DSA:3.40.225.10 13 215 3.7E-44 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily XF_2209 731108650fc6c89c1007e4ff1254096f 218 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 217 102.763 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 XF_2209 731108650fc6c89c1007e4ff1254096f 218 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 208 2.6E-37 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal XF_2209 731108650fc6c89c1007e4ff1254096f 218 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 25 213 1.8E-69 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 XF_2209 731108650fc6c89c1007e4ff1254096f 218 SUPERFAMILY SSF53639 17 215 2.16E-42 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily XF_2209 731108650fc6c89c1007e4ff1254096f 218 SMART SM01007 21 209 8.9E-46 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal XF_0624 ad2c73bc804dd661a09b3414404dd6af 282 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 3 274 31.945 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 XF_0624 ad2c73bc804dd661a09b3414404dd6af 282 SUPERFAMILY SSF51735 103 273 2.02E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0624 ad2c73bc804dd661a09b3414404dd6af 282 Gene3D G3DSA:3.40.50.10860 6 263 1.8E-74 T 14-10-2018 XF_0624 ad2c73bc804dd661a09b3414404dd6af 282 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 192 7.3E-10 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase XF_0624 ad2c73bc804dd661a09b3414404dd6af 282 SUPERFAMILY SSF53223 4 102 2.59E-30 T 14-10-2018 XF_0624 ad2c73bc804dd661a09b3414404dd6af 282 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 6 274 2.0E-71 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 XF_0624 ad2c73bc804dd661a09b3414404dd6af 282 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 8 90 8.6E-27 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 XF_0624 ad2c73bc804dd661a09b3414404dd6af 282 Gene3D G3DSA:3.40.50.720 102 242 1.8E-74 T 14-10-2018 XF_0081 1e701f2f0916c38726a2feaa41b8511b 901 Pfam PF13954 PapC N-terminal domain 101 243 3.5E-47 T 14-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 XF_0081 1e701f2f0916c38726a2feaa41b8511b 901 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 375 385 - T 14-10-2018 IPR018030 Fimbrial membrane usher, conserved site XF_0081 1e701f2f0916c38726a2feaa41b8511b 901 Gene3D G3DSA:2.60.40.2070 815 901 4.9E-19 T 14-10-2018 XF_0081 1e701f2f0916c38726a2feaa41b8511b 901 Gene3D G3DSA:2.60.40.2610 724 814 9.2E-29 T 14-10-2018 XF_0081 1e701f2f0916c38726a2feaa41b8511b 901 Pfam PF00577 Outer membrane usher protein 263 809 9.3E-169 T 14-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 XF_0081 1e701f2f0916c38726a2feaa41b8511b 901 Gene3D G3DSA:3.10.20.410 99 221 1.7E-34 T 14-10-2018 XF_0081 1e701f2f0916c38726a2feaa41b8511b 901 Gene3D G3DSA:2.60.40.3110 333 422 2.3E-39 T 14-10-2018 XF_0081 1e701f2f0916c38726a2feaa41b8511b 901 SUPERFAMILY SSF141729 122 235 3.53E-34 T 14-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 XF_0081 1e701f2f0916c38726a2feaa41b8511b 901 Pfam PF13953 PapC C-terminal domain 819 883 2.0E-21 T 14-10-2018 IPR025949 PapC-like, C-terminal domain XF_1272 ea8ca5b66906720f4b681e6e19897e46 267 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 123 207 4.8E-12 T 14-10-2018 IPR032030 YscD, cytoplasmic domain XF_1272 ea8ca5b66906720f4b681e6e19897e46 267 Gene3D G3DSA:2.60.200.20 98 208 3.3E-16 T 14-10-2018 XF_1272 ea8ca5b66906720f4b681e6e19897e46 267 SUPERFAMILY SSF49879 114 207 3.32E-16 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 XF_1625 abe04dc9608c4c53589b02183359c7db 346 SUPERFAMILY SSF55874 213 296 9.89E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_1625 abe04dc9608c4c53589b02183359c7db 346 Pfam PF06580 Histidine kinase 158 236 8.0E-21 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 XF_2489 cf3f1edbcb90bccdb0799f5ffbb67b7b 91 Pfam PF04965 Gene 25-like lysozyme 1 64 6.8E-12 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD XF_2489 cf3f1edbcb90bccdb0799f5ffbb67b7b 91 Gene3D G3DSA:3.10.450.40 1 83 1.4E-16 T 14-10-2018 XF_2489 cf3f1edbcb90bccdb0799f5ffbb67b7b 91 SUPERFAMILY SSF160719 1 82 2.09E-20 T 14-10-2018 XF_0723 cf3f1edbcb90bccdb0799f5ffbb67b7b 91 Pfam PF04965 Gene 25-like lysozyme 1 64 6.8E-12 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD XF_0723 cf3f1edbcb90bccdb0799f5ffbb67b7b 91 Gene3D G3DSA:3.10.450.40 1 83 1.4E-16 T 14-10-2018 XF_0723 cf3f1edbcb90bccdb0799f5ffbb67b7b 91 SUPERFAMILY SSF160719 1 82 2.09E-20 T 14-10-2018 XF_1332 4312f32b0e02d1ce6239d93cabd01810 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 350 2.7E-136 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XF_1332 4312f32b0e02d1ce6239d93cabd01810 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 7 349 3.3E-128 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XF_1332 4312f32b0e02d1ce6239d93cabd01810 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XF_1332 4312f32b0e02d1ce6239d93cabd01810 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 4 352 49.373 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XF_1332 4312f32b0e02d1ce6239d93cabd01810 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 20 29 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XF_1332 4312f32b0e02d1ce6239d93cabd01810 354 SUPERFAMILY SSF51726 1 353 4.01E-110 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XF_1332 4312f32b0e02d1ce6239d93cabd01810 354 Gene3D G3DSA:3.20.20.210 1 354 6.4E-147 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XF_1197 3001268b82946bafc6014574e4bfb06b 346 Gene3D G3DSA:1.10.620.20 26 317 2.6E-78 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 XF_1197 3001268b82946bafc6014574e4bfb06b 346 SUPERFAMILY SSF47240 22 346 3.36E-85 T 14-10-2018 IPR009078 Ferritin-like superfamily XF_1197 3001268b82946bafc6014574e4bfb06b 346 PIRSF PIRSF000355 1 346 1.3E-112 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XF_1197 3001268b82946bafc6014574e4bfb06b 346 Pfam PF00268 Ribonucleotide reductase, small chain 31 304 2.8E-68 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XF_0901 d38f667bc8df97ebd617eaede4b2448f 323 SMART SM00116 109 158 0.17 T 14-10-2018 IPR000644 CBS domain XF_0901 d38f667bc8df97ebd617eaede4b2448f 323 SMART SM00116 172 220 6.4 T 14-10-2018 IPR000644 CBS domain XF_0901 d38f667bc8df97ebd617eaede4b2448f 323 Pfam PF00571 CBS domain 171 220 3.6E-5 T 14-10-2018 IPR000644 CBS domain XF_0901 d38f667bc8df97ebd617eaede4b2448f 323 Pfam PF00571 CBS domain 100 155 7.8E-7 T 14-10-2018 IPR000644 CBS domain XF_0901 d38f667bc8df97ebd617eaede4b2448f 323 Gene3D G3DSA:3.90.1280.20 109 168 1.4E-20 T 14-10-2018 XF_0901 d38f667bc8df97ebd617eaede4b2448f 323 Gene3D G3DSA:3.30.465.10 227 315 6.2E-28 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XF_0901 d38f667bc8df97ebd617eaede4b2448f 323 SUPERFAMILY SSF54631 97 234 2.81E-30 T 14-10-2018 XF_0901 d38f667bc8df97ebd617eaede4b2448f 323 Pfam PF03471 Transporter associated domain 240 314 1.8E-22 T 14-10-2018 IPR005170 Transporter-associated domain XF_0901 d38f667bc8df97ebd617eaede4b2448f 323 SMART SM01091 238 316 4.1E-29 T 14-10-2018 IPR005170 Transporter-associated domain XF_0901 d38f667bc8df97ebd617eaede4b2448f 323 Gene3D G3DSA:3.90.1280.20 169 226 5.8E-29 T 14-10-2018 XF_0901 d38f667bc8df97ebd617eaede4b2448f 323 SUPERFAMILY SSF56176 236 321 3.27E-25 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XF_0473 b806b18a272fb2109700b2624d0f9333 170 Pfam PF12019 Type II transport protein GspH 44 160 6.7E-17 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 XF_0473 b806b18a272fb2109700b2624d0f9333 170 Gene3D G3DSA:3.30.700.10 8 169 7.4E-15 T 14-10-2018 XF_0473 b806b18a272fb2109700b2624d0f9333 170 SUPERFAMILY SSF54523 8 145 4.39E-20 T 14-10-2018 XF_0473 b806b18a272fb2109700b2624d0f9333 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 2.1E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0473 b806b18a272fb2109700b2624d0f9333 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 28 2.5E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_1067 67e3bae20c566113f952b7c68f8dc3da 364 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_1067 67e3bae20c566113f952b7c68f8dc3da 364 Pfam PF08402 TOBE domain 282 353 3.2E-10 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 XF_1067 67e3bae20c566113f952b7c68f8dc3da 364 Pfam PF00005 ABC transporter 22 162 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_1067 67e3bae20c566113f952b7c68f8dc3da 364 SUPERFAMILY SSF50331 238 361 4.37E-27 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal XF_1067 67e3bae20c566113f952b7c68f8dc3da 364 Gene3D G3DSA:3.40.50.300 3 222 2.8E-61 T 14-10-2018 XF_1067 67e3bae20c566113f952b7c68f8dc3da 364 Gene3D G3DSA:2.40.50.940 223 354 1.9E-30 T 14-10-2018 XF_1067 67e3bae20c566113f952b7c68f8dc3da 364 SUPERFAMILY SSF52540 4 242 5.46E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1067 67e3bae20c566113f952b7c68f8dc3da 364 SMART SM00382 29 211 1.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1067 67e3bae20c566113f952b7c68f8dc3da 364 Gene3D G3DSA:2.40.50.140 289 345 1.9E-30 T 14-10-2018 XF_2611 9c88ac78d080f5f520007f2f5c970845 109 SUPERFAMILY SSF52172 2 98 2.85E-10 T 14-10-2018 IPR011006 CheY-like superfamily XF_2611 9c88ac78d080f5f520007f2f5c970845 109 Gene3D G3DSA:3.40.50.2300 1 102 3.0E-20 T 14-10-2018 XF_2530 da81853e416bc24b958764fbfdafc1df 339 Gene3D G3DSA:1.10.150.130 64 168 4.1E-6 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal XF_2530 da81853e416bc24b958764fbfdafc1df 339 SUPERFAMILY SSF56349 65 328 2.56E-48 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XF_2530 da81853e416bc24b958764fbfdafc1df 339 Pfam PF00589 Phage integrase family 174 329 2.3E-15 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XF_2530 da81853e416bc24b958764fbfdafc1df 339 Gene3D G3DSA:1.10.443.10 169 335 2.9E-29 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XF_1132 b3c61fcf2364aadd2115e09ea38ba457 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1132 b3c61fcf2364aadd2115e09ea38ba457 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1132 b3c61fcf2364aadd2115e09ea38ba457 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1132 b3c61fcf2364aadd2115e09ea38ba457 301 SUPERFAMILY SSF46785 7 86 8.04E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_1132 b3c61fcf2364aadd2115e09ea38ba457 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 6.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1132 b3c61fcf2364aadd2115e09ea38ba457 301 Gene3D G3DSA:1.10.10.10 4 91 3.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1132 b3c61fcf2364aadd2115e09ea38ba457 301 Gene3D G3DSA:3.40.190.10 165 266 3.6E-55 T 14-10-2018 XF_1132 b3c61fcf2364aadd2115e09ea38ba457 301 SUPERFAMILY SSF53850 90 298 1.56E-40 T 14-10-2018 XF_1132 b3c61fcf2364aadd2115e09ea38ba457 301 Pfam PF03466 LysR substrate binding domain 89 295 5.0E-41 T 14-10-2018 IPR005119 LysR, substrate-binding XF_1132 b3c61fcf2364aadd2115e09ea38ba457 301 Gene3D G3DSA:3.40.190.10 93 291 3.6E-55 T 14-10-2018 XF_0669 e42baf6215011e4b6de7275828bde2bf 985 SUPERFAMILY SSF52518 149 561 5.36E-133 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold XF_0669 e42baf6215011e4b6de7275828bde2bf 985 SUPERFAMILY SSF52518 569 795 1.08E-91 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold XF_0669 e42baf6215011e4b6de7275828bde2bf 985 SUPERFAMILY SSF52922 796 983 1.17E-57 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XF_0669 e42baf6215011e4b6de7275828bde2bf 985 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 229 383 1.6E-6 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XF_0669 e42baf6215011e4b6de7275828bde2bf 985 Gene3D G3DSA:3.40.50.920 801 984 1.8E-73 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XF_0669 e42baf6215011e4b6de7275828bde2bf 985 PIRSF PIRSF000156 88 985 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 XF_0669 e42baf6215011e4b6de7275828bde2bf 985 Gene3D G3DSA:3.40.50.970 148 565 1.6E-125 T 14-10-2018 XF_0669 e42baf6215011e4b6de7275828bde2bf 985 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 98 983 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 XF_0669 e42baf6215011e4b6de7275828bde2bf 985 Gene3D G3DSA:3.40.50.970 566 800 4.0E-101 T 14-10-2018 XF_1338 9804f901c78f293a96965db6cdc70caa 580 SUPERFAMILY SSF50715 364 575 1.78E-68 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XF_1338 9804f901c78f293a96965db6cdc70caa 580 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 35 578 2.0E-198 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XF_1338 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:2.40.240.10 364 574 2.6E-70 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XF_1338 9804f901c78f293a96965db6cdc70caa 580 SUPERFAMILY SSF52374 19 362 4.74E-89 T 14-10-2018 XF_1338 9804f901c78f293a96965db6cdc70caa 580 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 364 556 4.8E-53 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XF_1338 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:3.90.800.10 107 215 2.7E-95 T 14-10-2018 XF_1338 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:1.10.1160.10 285 363 9.0E-34 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 XF_1338 9804f901c78f293a96965db6cdc70caa 580 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 35 261 1.6E-77 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 XF_1338 9804f901c78f293a96965db6cdc70caa 580 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 277 361 2.7E-16 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 XF_1338 9804f901c78f293a96965db6cdc70caa 580 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 6 577 52.1 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 XF_1338 9804f901c78f293a96965db6cdc70caa 580 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 226 5.8E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XF_1338 9804f901c78f293a96965db6cdc70caa 580 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 50 5.8E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XF_1338 9804f901c78f293a96965db6cdc70caa 580 PRINTS PR00987 Glutamyl-tRNA synthetase signature 67 80 5.8E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XF_1338 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:2.40.240.10 372 490 2.6E-70 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XF_1338 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:3.40.50.620 36 253 2.7E-95 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_1338 9804f901c78f293a96965db6cdc70caa 580 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_1133 3dd71296725114da33eef0fd7f0202b0 189 Gene3D G3DSA:3.40.50.360 2 188 1.6E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily XF_1133 3dd71296725114da33eef0fd7f0202b0 189 SUPERFAMILY SSF52218 3 186 1.83E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily XF_1133 3dd71296725114da33eef0fd7f0202b0 189 Pfam PF03358 NADPH-dependent FMN reductase 46 123 4.5E-10 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 XF_1133 3dd71296725114da33eef0fd7f0202b0 189 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 XF_2741 3ebc4a304ea4e443a4f4f91c75e84ec0 412 SUPERFAMILY SSF116734 199 405 2.78E-26 T 14-10-2018 XF_2741 3ebc4a304ea4e443a4f4f91c75e84ec0 412 Pfam PF01420 Type I restriction modification DNA specificity domain 69 158 3.3E-9 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XF_2741 3ebc4a304ea4e443a4f4f91c75e84ec0 412 SUPERFAMILY SSF116734 5 170 1.47E-25 T 14-10-2018 XF_2741 3ebc4a304ea4e443a4f4f91c75e84ec0 412 Gene3D G3DSA:3.90.220.20 46 169 3.5E-11 T 14-10-2018 XF_2741 3ebc4a304ea4e443a4f4f91c75e84ec0 412 Gene3D G3DSA:3.90.220.20 200 399 9.4E-24 T 14-10-2018 XF_2208 35ef5a0bd3ecdc79c84e14d509cccb4c 477 Gene3D G3DSA:1.20.1740.10 22 476 2.9E-123 T 14-10-2018 XF_2208 35ef5a0bd3ecdc79c84e14d509cccb4c 477 PIRSF PIRSF006060 8 477 2.4E-96 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XF_2208 35ef5a0bd3ecdc79c84e14d509cccb4c 477 Pfam PF13520 Amino acid permease 27 440 2.0E-61 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XF_2628 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.0E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XF_2628 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:2.40.30.10 208 336 1.3E-52 T 14-10-2018 XF_2628 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF50447 207 301 3.53E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XF_2628 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF00009 Elongation factor Tu GTP binding domain 11 203 6.2E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2628 85b470620d53c501f2cfbff7df48ce70 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 8.4E-223 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XF_2628 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:2.40.30.10 340 395 5.2E-28 T 14-10-2018 XF_2628 85b470620d53c501f2cfbff7df48ce70 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 1.2E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XF_2628 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 5.2E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal XF_2628 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF50465 304 396 1.58E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XF_2628 85b470620d53c501f2cfbff7df48ce70 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.146 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XF_2628 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:3.40.50.300 1 205 1.3E-68 T 14-10-2018 XF_2628 85b470620d53c501f2cfbff7df48ce70 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site XF_2628 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF52540 5 221 4.53E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2628 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2628 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2628 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2628 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2628 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2640 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.0E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XF_2640 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:2.40.30.10 208 336 1.3E-52 T 14-10-2018 XF_2640 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF50447 207 301 3.53E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XF_2640 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF00009 Elongation factor Tu GTP binding domain 11 203 6.2E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2640 85b470620d53c501f2cfbff7df48ce70 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 8.4E-223 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XF_2640 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:2.40.30.10 340 395 5.2E-28 T 14-10-2018 XF_2640 85b470620d53c501f2cfbff7df48ce70 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 1.2E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XF_2640 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 5.2E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal XF_2640 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF50465 304 396 1.58E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XF_2640 85b470620d53c501f2cfbff7df48ce70 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.146 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XF_2640 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:3.40.50.300 1 205 1.3E-68 T 14-10-2018 XF_2640 85b470620d53c501f2cfbff7df48ce70 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site XF_2640 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF52540 5 221 4.53E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2640 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2640 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2640 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2640 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_2640 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_1392 9c9536d28dd477309864c488a51c67e9 164 Pfam PF00436 Single-strand binding protein family 5 108 2.0E-38 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XF_1392 9c9536d28dd477309864c488a51c67e9 164 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 35.543 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XF_1392 9c9536d28dd477309864c488a51c67e9 164 SUPERFAMILY SSF50249 3 164 2.02E-55 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1392 9c9536d28dd477309864c488a51c67e9 164 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 164 1.5E-50 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XF_1392 9c9536d28dd477309864c488a51c67e9 164 Gene3D G3DSA:2.40.50.140 1 119 2.8E-43 T 14-10-2018 XF_1392 9c9536d28dd477309864c488a51c67e9 164 PIRSF PIRSF002070 1 163 3.0E-36 T 14-10-2018 XF_2475 41ea897ac2247fa48068734b9353fb30 281 Pfam PF00588 SpoU rRNA Methylase family 36 186 3.2E-36 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 XF_2475 41ea897ac2247fa48068734b9353fb30 281 Gene3D G3DSA:1.10.8.590 209 271 4.6E-19 T 14-10-2018 XF_2475 41ea897ac2247fa48068734b9353fb30 281 Gene3D G3DSA:3.40.1280.10 32 197 1.3E-61 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XF_2475 41ea897ac2247fa48068734b9353fb30 281 PIRSF PIRSF004808 32 278 1.7E-71 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 XF_2475 41ea897ac2247fa48068734b9353fb30 281 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 35 271 6.3E-66 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 XF_2475 41ea897ac2247fa48068734b9353fb30 281 SUPERFAMILY SSF75217 17 193 2.09E-37 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 658 676 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 SUPERFAMILY SSF51120 773 930 9.42E-28 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 SUPERFAMILY SSF51120 1098 1254 5.49E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1155 1173 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 831 849 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 667 685 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 SUPERFAMILY SSF51120 601 767 1.44E-27 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 SUPERFAMILY SSF51120 936 1092 1.16E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1137 1155 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 822 840 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1146 1164 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF06594 Haemolysin-type calcium binding protein related domain 894 932 4.2E-13 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF06594 Haemolysin-type calcium binding protein related domain 730 770 1.1E-11 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1218 1257 6.0E-12 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1056 1094 4.2E-13 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 813 831 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 835 850 0.012 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 671 686 0.008 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 798 814 1.7 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 978 995 0.002 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1141 1157 0.05 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 997 1012 0.012 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1122 1138 1.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 625 641 3.9 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 960 976 0.27 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 653 669 0.018 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1159 1174 0.012 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 817 833 0.01 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 993 1011 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 PRINTS PR00313 NodO calcium binding signature 997 1005 1.7E-12 T 14-10-2018 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 PRINTS PR00313 NodO calcium binding signature 979 987 1.7E-12 T 14-10-2018 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 PRINTS PR00313 NodO calcium binding signature 832 843 1.7E-12 T 14-10-2018 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 PRINTS PR00313 NodO calcium binding signature 1006 1015 1.7E-12 T 14-10-2018 XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 975 993 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 984 1002 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 649 667 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Gene3D G3DSA:2.150.10.10 946 1108 1.7E-36 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Gene3D G3DSA:2.150.10.10 625 785 1.3E-33 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Gene3D G3DSA:2.150.10.10 791 945 3.1E-36 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2759 9aba11f80f5361bae335ab8e814bd799 1296 Gene3D G3DSA:2.150.10.10 1115 1272 1.1E-44 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_1700 57ab4fc80863a13a4c1ed9de771d529a 213 Gene3D G3DSA:2.40.50.230 28 125 1.3E-25 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Gene3D G3DSA:3.90.1800.10 1298 1349 7.3E-11 T 14-10-2018 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Gene3D G3DSA:2.40.50.150 866 989 8.2E-44 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Gene3D G3DSA:2.40.270.10 1080 1288 2.4E-85 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 18 1388 12.279 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Pfam PF04560 RNA polymerase Rpb2, domain 7 1312 1386 6.9E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Gene3D G3DSA:3.90.1100.10 23 181 2.6E-55 T 14-10-2018 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Gene3D G3DSA:3.90.1100.10 678 745 9.1E-21 T 14-10-2018 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1108 1120 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 13 1385 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Gene3D G3DSA:2.40.50.100 746 821 3.4E-29 T 14-10-2018 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Pfam PF04561 RNA polymerase Rpb2, domain 2 454 486 3.7E-5 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Pfam PF04561 RNA polymerase Rpb2, domain 2 161 231 4.2E-8 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Gene3D G3DSA:2.40.270.10 823 865 1.5E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Gene3D G3DSA:3.90.1100.10 473 662 9.4E-67 T 14-10-2018 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Pfam PF00562 RNA polymerase Rpb2, domain 6 750 1310 1.0E-158 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Gene3D G3DSA:3.90.1110.10 331 472 4.3E-28 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Pfam PF10385 RNA polymerase beta subunit external 1 domain 623 688 2.9E-23 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 SUPERFAMILY SSF64484 17 1386 0.0 T 14-10-2018 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Pfam PF04565 RNA polymerase Rpb2, domain 3 545 612 5.2E-27 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_2633 37adfe3c1408b7f6b0d642e11bf24272 1388 Pfam PF04563 RNA polymerase beta subunit 32 531 7.8E-42 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_1424 67bde8741da3070cd265b4c14283c579 262 Pfam PF13098 Thioredoxin-like domain 129 251 1.0E-23 T 14-10-2018 IPR012336 Thioredoxin-like fold XF_1424 67bde8741da3070cd265b4c14283c579 262 Gene3D G3DSA:3.10.450.70 40 97 2.0E-10 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 XF_1424 67bde8741da3070cd265b4c14283c579 262 SUPERFAMILY SSF54423 53 100 1.41E-10 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 XF_1424 67bde8741da3070cd265b4c14283c579 262 Pfam PF10411 Disulfide bond isomerase protein N-terminus 47 99 7.2E-16 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal XF_1424 67bde8741da3070cd265b4c14283c579 262 Gene3D G3DSA:3.40.30.10 98 255 2.1E-45 T 14-10-2018 XF_1424 67bde8741da3070cd265b4c14283c579 262 SUPERFAMILY SSF52833 112 253 6.28E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_2349 6928cc457acba60f17e6592991eef651 745 SUPERFAMILY SSF103515 498 745 5.36E-26 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily XF_2349 6928cc457acba60f17e6592991eef651 745 SMART SM00869 487 734 1.1E-5 T 14-10-2018 IPR005546 Autotransporter beta-domain XF_2349 6928cc457acba60f17e6592991eef651 745 Gene3D G3DSA:2.40.128.130 469 745 7.4E-15 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily XF_1158 8582d846e46db3e72848884440ecbc0e 239 Gene3D G3DSA:3.30.300.20 17 107 2.3E-26 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta XF_1158 8582d846e46db3e72848884440ecbc0e 239 SUPERFAMILY SSF54814 2 106 5.23E-34 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XF_1158 8582d846e46db3e72848884440ecbc0e 239 SMART SM00322 60 125 4.6E-6 T 14-10-2018 IPR004087 K Homology domain GO:0003676 XF_1158 8582d846e46db3e72848884440ecbc0e 239 Pfam PF07650 KH domain 38 111 4.8E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1158 8582d846e46db3e72848884440ecbc0e 239 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 36.137 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 XF_1158 8582d846e46db3e72848884440ecbc0e 239 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 8.0E-87 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 XF_1158 8582d846e46db3e72848884440ecbc0e 239 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 5.4E-36 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1158 8582d846e46db3e72848884440ecbc0e 239 Gene3D G3DSA:3.30.1140.32 108 208 1.2E-39 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1158 8582d846e46db3e72848884440ecbc0e 239 SUPERFAMILY SSF54821 108 206 6.02E-37 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_0926 8cd707868e19d15e8bb19e7bed470a3f 170 Pfam PF01327 Polypeptide deformylase 5 155 1.2E-50 T 14-10-2018 IPR023635 Peptide deformylase XF_0926 8cd707868e19d15e8bb19e7bed470a3f 170 PRINTS PR01576 Peptide deformylase signature 36 65 3.6E-37 T 14-10-2018 IPR023635 Peptide deformylase XF_0926 8cd707868e19d15e8bb19e7bed470a3f 170 PRINTS PR01576 Peptide deformylase signature 92 103 3.6E-37 T 14-10-2018 IPR023635 Peptide deformylase XF_0926 8cd707868e19d15e8bb19e7bed470a3f 170 PRINTS PR01576 Peptide deformylase signature 104 122 3.6E-37 T 14-10-2018 IPR023635 Peptide deformylase XF_0926 8cd707868e19d15e8bb19e7bed470a3f 170 PRINTS PR01576 Peptide deformylase signature 123 152 3.6E-37 T 14-10-2018 IPR023635 Peptide deformylase XF_0926 8cd707868e19d15e8bb19e7bed470a3f 170 Hamap MF_00163 Peptide deformylase [def]. 2 165 31.011 T 14-10-2018 IPR023635 Peptide deformylase XF_0926 8cd707868e19d15e8bb19e7bed470a3f 170 PIRSF PIRSF004749 1 170 4.9E-56 T 14-10-2018 IPR023635 Peptide deformylase XF_0926 8cd707868e19d15e8bb19e7bed470a3f 170 SUPERFAMILY SSF56420 2 167 3.93E-62 T 14-10-2018 IPR036821 Peptide deformylase superfamily XF_0926 8cd707868e19d15e8bb19e7bed470a3f 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 162 1.9E-51 T 14-10-2018 IPR023635 Peptide deformylase XF_0926 8cd707868e19d15e8bb19e7bed470a3f 170 Gene3D G3DSA:3.90.45.10 1 170 3.9E-61 T 14-10-2018 IPR036821 Peptide deformylase superfamily XF_2617 bae9975df892c6e6769247d5fd1ab0e2 623 Pfam PF00005 ABC transporter 20 180 3.0E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_2617 bae9975df892c6e6769247d5fd1ab0e2 623 SUPERFAMILY SSF52540 2 240 1.36E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2617 bae9975df892c6e6769247d5fd1ab0e2 623 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_2617 bae9975df892c6e6769247d5fd1ab0e2 623 Pfam PF00005 ABC transporter 331 464 5.3E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_2617 bae9975df892c6e6769247d5fd1ab0e2 623 Gene3D G3DSA:1.10.287.380 547 623 2.9E-22 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 XF_2617 bae9975df892c6e6769247d5fd1ab0e2 623 Gene3D G3DSA:3.40.50.300 3 274 2.3E-64 T 14-10-2018 XF_2617 bae9975df892c6e6769247d5fd1ab0e2 623 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_2617 bae9975df892c6e6769247d5fd1ab0e2 623 Pfam PF16326 ABC transporter C-terminal domain 554 621 5.8E-20 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 XF_2617 bae9975df892c6e6769247d5fd1ab0e2 623 SUPERFAMILY SSF52540 308 508 2.63E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2617 bae9975df892c6e6769247d5fd1ab0e2 623 SMART SM00382 28 225 4.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_2617 bae9975df892c6e6769247d5fd1ab0e2 623 SMART SM00382 339 509 9.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_2617 bae9975df892c6e6769247d5fd1ab0e2 623 Pfam PF12848 ABC transporter 219 293 2.1E-10 T 14-10-2018 IPR032781 ABC-transporter extension domain XF_2617 bae9975df892c6e6769247d5fd1ab0e2 623 Gene3D G3DSA:3.40.50.300 277 541 4.8E-66 T 14-10-2018 XF_0991 64262d70fd34879171710cfd0be86592 133 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 92 123 1.2E-7 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 XF_0991 64262d70fd34879171710cfd0be86592 133 SUPERFAMILY SSF109635 4 89 1.96E-26 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily XF_0991 64262d70fd34879171710cfd0be86592 133 Gene3D G3DSA:1.20.120.910 5 132 4.4E-30 T 14-10-2018 XF_0991 64262d70fd34879171710cfd0be86592 133 SUPERFAMILY SSF57716 93 131 1.21E-6 T 14-10-2018 XF_0991 64262d70fd34879171710cfd0be86592 133 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 10 132 27.627 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 XF_0991 64262d70fd34879171710cfd0be86592 133 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 14 123 3.3E-42 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 XF_1118 765e94794ac8667d111b85f50afedef5 468 SUPERFAMILY SSF53623 118 303 5.27E-41 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XF_1118 765e94794ac8667d111b85f50afedef5 468 Gene3D G3DSA:3.40.50.720 5 97 2.4E-5 T 14-10-2018 XF_1118 765e94794ac8667d111b85f50afedef5 468 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 450 5.8E-81 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XF_1118 765e94794ac8667d111b85f50afedef5 468 SUPERFAMILY SSF53244 310 450 6.41E-26 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XF_1118 765e94794ac8667d111b85f50afedef5 468 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 455 25.943 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XF_1118 765e94794ac8667d111b85f50afedef5 468 Gene3D G3DSA:3.40.1190.10 115 311 3.2E-41 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XF_1118 765e94794ac8667d111b85f50afedef5 468 Pfam PF08245 Mur ligase middle domain 120 289 2.7E-24 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XF_1118 765e94794ac8667d111b85f50afedef5 468 Gene3D G3DSA:3.90.190.20 312 452 3.4E-28 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XF_0995 81048c7359d6579d2e8c0a2d429e882a 474 SUPERFAMILY SSF52374 11 321 2.39E-87 T 14-10-2018 XF_0995 81048c7359d6579d2e8c0a2d429e882a 474 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 10 472 36.452 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 XF_0995 81048c7359d6579d2e8c0a2d429e882a 474 Pfam PF09190 DALR domain 347 415 6.0E-14 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 XF_0995 81048c7359d6579d2e8c0a2d429e882a 474 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 10 471 1.1E-145 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 XF_0995 81048c7359d6579d2e8c0a2d429e882a 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 33 44 1.6E-28 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XF_0995 81048c7359d6579d2e8c0a2d429e882a 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 229 250 1.6E-28 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XF_0995 81048c7359d6579d2e8c0a2d429e882a 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 69 78 1.6E-28 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XF_0995 81048c7359d6579d2e8c0a2d429e882a 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 198 216 1.6E-28 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XF_0995 81048c7359d6579d2e8c0a2d429e882a 474 SUPERFAMILY SSF47323 324 471 2.62E-29 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0995 81048c7359d6579d2e8c0a2d429e882a 474 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 26 320 3.0E-111 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 XF_0995 81048c7359d6579d2e8c0a2d429e882a 474 Gene3D G3DSA:1.20.120.640 314 472 4.7E-34 T 14-10-2018 XF_0995 81048c7359d6579d2e8c0a2d429e882a 474 SMART SM00840 346 415 2.8E-13 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 XF_0995 81048c7359d6579d2e8c0a2d429e882a 474 Gene3D G3DSA:3.40.50.620 5 313 1.3E-120 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0275 a4c99b22a2a033a664853252ac7383ec 198 Pfam PF00406 Adenylate kinase 16 174 1.7E-53 T 14-10-2018 XF_0275 a4c99b22a2a033a664853252ac7383ec 198 Gene3D G3DSA:3.40.50.300 8 196 7.1E-62 T 14-10-2018 XF_0275 a4c99b22a2a033a664853252ac7383ec 198 PRINTS PR00094 Adenylate kinase signature 43 57 1.9E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XF_0275 a4c99b22a2a033a664853252ac7383ec 198 PRINTS PR00094 Adenylate kinase signature 161 175 1.9E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XF_0275 a4c99b22a2a033a664853252ac7383ec 198 PRINTS PR00094 Adenylate kinase signature 15 28 1.9E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XF_0275 a4c99b22a2a033a664853252ac7383ec 198 PRINTS PR00094 Adenylate kinase signature 92 108 1.9E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XF_0275 a4c99b22a2a033a664853252ac7383ec 198 PRINTS PR00094 Adenylate kinase signature 144 159 1.9E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XF_0275 a4c99b22a2a033a664853252ac7383ec 198 ProSitePatterns PS00113 Adenylate kinase signature. 92 103 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XF_0275 a4c99b22a2a033a664853252ac7383ec 198 Hamap MF_00235 Adenylate kinase [adk]. 12 197 44.606 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XF_0275 a4c99b22a2a033a664853252ac7383ec 198 SUPERFAMILY SSF52540 12 194 4.97E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0275 a4c99b22a2a033a664853252ac7383ec 198 TIGRFAM TIGR01351 adk: adenylate kinase 13 139 3.7E-50 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 XF_0554 b1e69d004e4c467ae25cb12ec304683a 121 Gene3D G3DSA:3.40.1350.10 10 121 7.7E-28 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XF_0554 b1e69d004e4c467ae25cb12ec304683a 121 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 4 116 1.4E-31 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 XF_0554 b1e69d004e4c467ae25cb12ec304683a 121 Pfam PF02021 Uncharacterised protein family UPF0102 12 100 2.4E-22 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 XF_0554 b1e69d004e4c467ae25cb12ec304683a 121 SUPERFAMILY SSF52980 6 110 1.29E-13 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XF_0554 b1e69d004e4c467ae25cb12ec304683a 121 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 115 21.466 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 XF_0497 60ff6f703c3486a840020976b6389da5 155 Pfam PF14367 Domain of unknown function (DUF4411) 2 155 5.7E-41 T 14-10-2018 IPR016541 Uncharacterised conserved protein UCP008505 XF_0497 60ff6f703c3486a840020976b6389da5 155 SUPERFAMILY SSF88723 1 121 7.01E-6 T 14-10-2018 IPR029060 PIN-like domain superfamily XF_0497 60ff6f703c3486a840020976b6389da5 155 PIRSF PIRSF008505 1 155 1.7E-69 T 14-10-2018 IPR016541 Uncharacterised conserved protein UCP008505 XF_0186 7b6af5be6cef03543b50760d3db60bea 277 TIGRFAM TIGR00444 mazG: MazG family protein 17 267 2.0E-78 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG XF_0186 7b6af5be6cef03543b50760d3db60bea 277 SUPERFAMILY SSF101386 10 111 3.74E-24 T 14-10-2018 XF_0186 7b6af5be6cef03543b50760d3db60bea 277 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 34 107 1.3E-27 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core XF_0186 7b6af5be6cef03543b50760d3db60bea 277 SUPERFAMILY SSF101386 147 246 5.61E-8 T 14-10-2018 XF_0186 7b6af5be6cef03543b50760d3db60bea 277 Gene3D G3DSA:1.10.287.1080 138 273 2.6E-27 T 14-10-2018 XF_0186 7b6af5be6cef03543b50760d3db60bea 277 Gene3D G3DSA:1.10.287.1080 8 132 5.2E-44 T 14-10-2018 XF_2673 76444f15149b26bcc5b1fd50a084fcd2 89 Gene3D G3DSA:2.20.25.10 8 89 3.3E-31 T 14-10-2018 XF_2673 76444f15149b26bcc5b1fd50a084fcd2 89 Pfam PF03966 Trm112p-like protein 2 68 3.7E-9 T 14-10-2018 IPR005651 Trm112-like XF_2673 76444f15149b26bcc5b1fd50a084fcd2 89 SUPERFAMILY SSF158997 1 78 7.85E-7 T 14-10-2018 XF_1419 1dc3e18054b8fcaa7414c9fcd2d274c8 305 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 158 4.2E-6 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1419 1dc3e18054b8fcaa7414c9fcd2d274c8 305 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 246 278 2.1E-5 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1419 1dc3e18054b8fcaa7414c9fcd2d274c8 305 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 109 3.6E-5 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1419 1dc3e18054b8fcaa7414c9fcd2d274c8 305 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 166 200 0.001 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1419 1dc3e18054b8fcaa7414c9fcd2d274c8 305 Gene3D G3DSA:2.160.10.10 38 107 1.4E-9 T 14-10-2018 XF_1419 1dc3e18054b8fcaa7414c9fcd2d274c8 305 Gene3D G3DSA:2.160.10.10 108 187 2.1E-14 T 14-10-2018 XF_1419 1dc3e18054b8fcaa7414c9fcd2d274c8 305 Gene3D G3DSA:2.160.10.10 188 299 3.1E-17 T 14-10-2018 XF_1419 1dc3e18054b8fcaa7414c9fcd2d274c8 305 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 247 275 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XF_1419 1dc3e18054b8fcaa7414c9fcd2d274c8 305 SUPERFAMILY SSF51161 49 289 8.37E-37 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily XF_1163 81b4cb3ecff5b39e1653e87305ea08e7 105 SUPERFAMILY SSF50104 4 102 1.81E-29 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily XF_1163 81b4cb3ecff5b39e1653e87305ea08e7 105 Pfam PF00467 KOW motif 7 35 5.1E-8 T 14-10-2018 IPR005824 KOW XF_1163 81b4cb3ecff5b39e1653e87305ea08e7 105 SMART SM00739 4 31 2.8E-7 T 14-10-2018 IPR005824 KOW XF_1163 81b4cb3ecff5b39e1653e87305ea08e7 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1163 81b4cb3ecff5b39e1653e87305ea08e7 105 Gene3D G3DSA:2.30.30.30 2 104 2.4E-34 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 XF_1163 81b4cb3ecff5b39e1653e87305ea08e7 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.273 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1163 81b4cb3ecff5b39e1653e87305ea08e7 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 103 4.1E-23 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1163 81b4cb3ecff5b39e1653e87305ea08e7 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.9E-34 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0816 4795ca74f78ee64177121816f86979ec 990 Gene3D G3DSA:3.30.830.10 301 498 8.6E-37 T 14-10-2018 XF_0816 4795ca74f78ee64177121816f86979ec 990 Gene3D G3DSA:3.30.830.10 771 966 1.3E-38 T 14-10-2018 XF_0816 4795ca74f78ee64177121816f86979ec 990 Gene3D G3DSA:3.30.830.10 75 297 2.3E-65 T 14-10-2018 XF_0816 4795ca74f78ee64177121816f86979ec 990 SUPERFAMILY SSF63411 775 981 2.67E-33 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XF_0816 4795ca74f78ee64177121816f86979ec 990 SUPERFAMILY SSF63411 543 761 1.38E-40 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XF_0816 4795ca74f78ee64177121816f86979ec 990 Pfam PF00675 Insulinase (Peptidase family M16) 559 679 8.4E-8 T 14-10-2018 IPR011765 Peptidase M16, N-terminal XF_0816 4795ca74f78ee64177121816f86979ec 990 Pfam PF00675 Insulinase (Peptidase family M16) 89 226 5.9E-15 T 14-10-2018 IPR011765 Peptidase M16, N-terminal XF_0816 4795ca74f78ee64177121816f86979ec 990 SUPERFAMILY SSF63411 74 284 3.3E-53 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XF_0816 4795ca74f78ee64177121816f86979ec 990 SUPERFAMILY SSF63411 304 487 3.0E-31 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XF_0816 4795ca74f78ee64177121816f86979ec 990 Pfam PF05193 Peptidase M16 inactive domain 246 421 2.0E-30 T 14-10-2018 IPR007863 Peptidase M16, C-terminal XF_0816 4795ca74f78ee64177121816f86979ec 990 Pfam PF05193 Peptidase M16 inactive domain 714 894 4.1E-29 T 14-10-2018 IPR007863 Peptidase M16, C-terminal XF_0816 4795ca74f78ee64177121816f86979ec 990 Gene3D G3DSA:3.30.830.10 549 761 4.1E-41 T 14-10-2018 XF_0826 e2e0900dee0f9b512c889e4338a9e08c 334 Pfam PF00274 Fructose-bisphosphate aldolase class-I 6 333 3.6E-136 T 14-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0826 e2e0900dee0f9b512c889e4338a9e08c 334 Gene3D G3DSA:3.20.20.70 2 334 5.2E-149 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_0826 e2e0900dee0f9b512c889e4338a9e08c 334 SUPERFAMILY SSF51569 4 333 5.34E-131 T 14-10-2018 XF_0826 e2e0900dee0f9b512c889e4338a9e08c 334 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 211 221 - T 14-10-2018 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_1175 407a1a6ca808ab1fa6c42775cbd6e279 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 34.828 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 XF_1175 407a1a6ca808ab1fa6c42775cbd6e279 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1175 407a1a6ca808ab1fa6c42775cbd6e279 208 Gene3D G3DSA:1.10.1050.10 6 208 8.3E-77 T 14-10-2018 XF_1175 407a1a6ca808ab1fa6c42775cbd6e279 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 7.2E-76 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 XF_1175 407a1a6ca808ab1fa6c42775cbd6e279 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 7.3E-31 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 XF_1175 407a1a6ca808ab1fa6c42775cbd6e279 208 SMART SM00363 97 155 1.5E-19 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1175 407a1a6ca808ab1fa6c42775cbd6e279 208 SMART SM01390 3 96 7.0E-46 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 XF_1175 407a1a6ca808ab1fa6c42775cbd6e279 208 SUPERFAMILY SSF55174 2 208 6.54E-66 T 14-10-2018 XF_1175 407a1a6ca808ab1fa6c42775cbd6e279 208 Gene3D G3DSA:3.10.290.10 96 193 8.3E-77 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XF_1175 407a1a6ca808ab1fa6c42775cbd6e279 208 Pfam PF01479 S4 domain 98 144 7.3E-21 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_2422 8125f592f76580362f51c57c4dd20261 347 Hamap MF_01454 GTPase Obg [obg]. 1 333 44.349 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 XF_2422 8125f592f76580362f51c57c4dd20261 347 Pfam PF01018 GTP1/OBG 1 148 1.3E-57 T 14-10-2018 IPR006169 GTP1/OBG domain XF_2422 8125f592f76580362f51c57c4dd20261 347 ProSitePatterns PS00905 GTP1/OBG family signature. 203 216 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 XF_2422 8125f592f76580362f51c57c4dd20261 347 PIRSF PIRSF002401 1 347 1.4E-129 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type XF_2422 8125f592f76580362f51c57c4dd20261 347 Gene3D G3DSA:3.40.50.300 149 339 1.8E-46 T 14-10-2018 XF_2422 8125f592f76580362f51c57c4dd20261 347 Pfam PF01926 50S ribosome-binding GTPase 152 284 1.5E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2422 8125f592f76580362f51c57c4dd20261 347 SUPERFAMILY SSF52540 141 336 3.41E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2422 8125f592f76580362f51c57c4dd20261 347 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 1 331 5.0E-132 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 XF_2422 8125f592f76580362f51c57c4dd20261 347 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 173 191 3.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2422 8125f592f76580362f51c57c4dd20261 347 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 152 172 3.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2422 8125f592f76580362f51c57c4dd20261 347 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 216 3.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2422 8125f592f76580362f51c57c4dd20261 347 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 218 236 3.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2422 8125f592f76580362f51c57c4dd20261 347 SUPERFAMILY SSF82051 1 148 1.12E-55 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily XF_2422 8125f592f76580362f51c57c4dd20261 347 Gene3D G3DSA:2.70.210.12 1 148 7.4E-58 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily XF_1021 348eb5b4b9792be3eec3ea64f851f1ad 310 Pfam PF13622 Thioesterase-like superfamily 44 299 8.4E-59 T 14-10-2018 XF_1021 348eb5b4b9792be3eec3ea64f851f1ad 310 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 29 300 5.8E-89 T 14-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 XF_1021 348eb5b4b9792be3eec3ea64f851f1ad 310 SUPERFAMILY SSF54637 133 300 9.69E-49 T 14-10-2018 IPR029069 HotDog domain superfamily XF_1021 348eb5b4b9792be3eec3ea64f851f1ad 310 SUPERFAMILY SSF54637 26 131 3.16E-37 T 14-10-2018 IPR029069 HotDog domain superfamily XF_1021 348eb5b4b9792be3eec3ea64f851f1ad 310 Gene3D G3DSA:3.10.129.90 19 303 2.6E-96 T 14-10-2018 XF_1143 367d20165a29fe82b6aac6c79cc30886 466 Gene3D G3DSA:1.10.1140.10 349 466 1.2E-59 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XF_1143 367d20165a29fe82b6aac6c79cc30886 466 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 9.1E-250 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 XF_1143 367d20165a29fe82b6aac6c79cc30886 466 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 4.6E-18 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XF_1143 367d20165a29fe82b6aac6c79cc30886 466 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.353 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 XF_1143 367d20165a29fe82b6aac6c79cc30886 466 SUPERFAMILY SSF47917 349 464 1.18E-54 T 14-10-2018 XF_1143 367d20165a29fe82b6aac6c79cc30886 466 Gene3D G3DSA:3.40.50.300 74 348 4.2E-110 T 14-10-2018 XF_1143 367d20165a29fe82b6aac6c79cc30886 466 SUPERFAMILY SSF52540 75 352 1.81E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1143 367d20165a29fe82b6aac6c79cc30886 466 SMART SM00382 140 409 9.1E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1143 367d20165a29fe82b6aac6c79cc30886 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.3E-61 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XF_1143 367d20165a29fe82b6aac6c79cc30886 466 SUPERFAMILY SSF50615 1 72 2.04E-24 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XF_1143 367d20165a29fe82b6aac6c79cc30886 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XF_1143 367d20165a29fe82b6aac6c79cc30886 466 Gene3D G3DSA:2.40.10.170 1 73 3.1E-28 T 14-10-2018 XF_0099 83ded0c60ab16a8f91077dce78a06cf3 610 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 8.0E-248 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XF_0099 83ded0c60ab16a8f91077dce78a06cf3 610 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.435 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XF_0099 83ded0c60ab16a8f91077dce78a06cf3 610 Gene3D G3DSA:3.50.30.80 419 570 9.2E-53 T 14-10-2018 XF_0099 83ded0c60ab16a8f91077dce78a06cf3 610 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XF_0099 83ded0c60ab16a8f91077dce78a06cf3 610 SUPERFAMILY SSF52016 419 606 2.35E-59 T 14-10-2018 XF_0099 83ded0c60ab16a8f91077dce78a06cf3 610 SUPERFAMILY SSF143975 4 418 1.96E-135 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XF_0099 83ded0c60ab16a8f91077dce78a06cf3 610 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XF_0099 83ded0c60ab16a8f91077dce78a06cf3 610 Pfam PF00920 Dehydratase family 34 603 8.6E-218 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XF_1170 3a22c66bf378239df6a70eda60368d16 53 PIRSF PIRSF002211 1 53 5.7E-21 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1170 3a22c66bf378239df6a70eda60368d16 53 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 1 53 2.6E-18 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1170 3a22c66bf378239df6a70eda60368d16 53 Pfam PF00327 Ribosomal protein L30p/L7e 1 49 4.6E-14 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain XF_1170 3a22c66bf378239df6a70eda60368d16 53 Gene3D G3DSA:3.30.1390.20 1 53 1.4E-18 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily XF_1170 3a22c66bf378239df6a70eda60368d16 53 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 53 15.12 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1170 3a22c66bf378239df6a70eda60368d16 53 SUPERFAMILY SSF55129 1 52 3.27E-16 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily XF_2588 452c7a8b1d40ec437403eb07fa7b3b31 250 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 249 109.403 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 XF_2588 452c7a8b1d40ec437403eb07fa7b3b31 250 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 212 3.1E-8 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 XF_2588 452c7a8b1d40ec437403eb07fa7b3b31 250 SUPERFAMILY SSF56300 1 240 1.57E-30 T 14-10-2018 XF_2588 452c7a8b1d40ec437403eb07fa7b3b31 250 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 240 6.2E-95 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 XF_2588 452c7a8b1d40ec437403eb07fa7b3b31 250 Gene3D G3DSA:3.60.21.10 1 241 4.5E-14 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like XF_0781 891c147e423d1be5f02595e845f0143d 597 Gene3D G3DSA:2.40.128.130 312 597 1.2E-39 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily XF_0781 891c147e423d1be5f02595e845f0143d 597 PIRSF PIRSF037375 1 597 2.5E-203 T 14-10-2018 IPR017186 Lipase, autotransporter EstA XF_0781 891c147e423d1be5f02595e845f0143d 597 SMART SM00869 332 589 1.3E-23 T 14-10-2018 IPR005546 Autotransporter beta-domain XF_0781 891c147e423d1be5f02595e845f0143d 597 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 32 290 6.4E-12 T 14-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 XF_0781 891c147e423d1be5f02595e845f0143d 597 Pfam PF03797 Autotransporter beta-domain 339 570 2.8E-35 T 14-10-2018 IPR005546 Autotransporter beta-domain XF_0781 891c147e423d1be5f02595e845f0143d 597 SUPERFAMILY SSF52266 31 297 7.66E-17 T 14-10-2018 XF_0781 891c147e423d1be5f02595e845f0143d 597 Gene3D G3DSA:3.40.50.1110 18 302 4.1E-76 T 14-10-2018 IPR036514 SGNH hydrolase superfamily XF_0781 891c147e423d1be5f02595e845f0143d 597 SUPERFAMILY SSF103515 328 592 3.01E-26 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily XF_0353 45a12706ee869ed7600ffdf4f6513b10 127 Gene3D G3DSA:3.30.1330.40 2 127 7.0E-50 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XF_0353 45a12706ee869ed7600ffdf4f6513b10 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 125 1.0E-48 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 XF_0353 45a12706ee869ed7600ffdf4f6513b10 127 SUPERFAMILY SSF55298 1 126 1.38E-44 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XF_0353 45a12706ee869ed7600ffdf4f6513b10 127 Pfam PF01042 Endoribonuclease L-PSP 9 125 9.9E-40 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 XF_1539 8ca0b6fe4d4903a69b5f6d197cf14991 264 Pfam PF02675 S-adenosylmethionine decarboxylase 43 170 8.4E-31 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XF_1539 8ca0b6fe4d4903a69b5f6d197cf14991 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 153.661 T 14-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XF_1539 8ca0b6fe4d4903a69b5f6d197cf14991 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 262 3.9E-142 T 14-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XF_1539 8ca0b6fe4d4903a69b5f6d197cf14991 264 PIRSF PIRSF001356 2 264 2.6E-147 T 14-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XF_1539 8ca0b6fe4d4903a69b5f6d197cf14991 264 Gene3D G3DSA:3.60.90.10 103 187 9.6E-7 T 14-10-2018 XF_1539 8ca0b6fe4d4903a69b5f6d197cf14991 264 Gene3D G3DSA:3.30.360.110 43 88 3.1E-5 T 14-10-2018 XF_1539 8ca0b6fe4d4903a69b5f6d197cf14991 264 SUPERFAMILY SSF56276 47 175 1.88E-24 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 XF_0267 0658a86c11b4170a05bdb95b0d72b204 910 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 36 47 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site XF_0267 0658a86c11b4170a05bdb95b0d72b204 910 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 287 297 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site XF_0267 0658a86c11b4170a05bdb95b0d72b204 910 Gene3D G3DSA:3.40.50.200 4 346 2.8E-60 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XF_0267 0658a86c11b4170a05bdb95b0d72b204 910 SUPERFAMILY SSF103515 608 906 2.09E-37 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily XF_0267 0658a86c11b4170a05bdb95b0d72b204 910 SUPERFAMILY SSF52743 14 347 3.14E-59 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XF_0267 0658a86c11b4170a05bdb95b0d72b204 910 SMART SM00869 642 902 3.7E-24 T 14-10-2018 IPR005546 Autotransporter beta-domain XF_0267 0658a86c11b4170a05bdb95b0d72b204 910 Pfam PF03797 Autotransporter beta-domain 646 881 1.2E-31 T 14-10-2018 IPR005546 Autotransporter beta-domain XF_0267 0658a86c11b4170a05bdb95b0d72b204 910 PRINTS PR00723 Subtilisin serine protease family (S8) signature 31 50 1.2E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related XF_0267 0658a86c11b4170a05bdb95b0d72b204 910 PRINTS PR00723 Subtilisin serine protease family (S8) signature 286 302 1.2E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related XF_0267 0658a86c11b4170a05bdb95b0d72b204 910 PRINTS PR00723 Subtilisin serine protease family (S8) signature 71 84 1.2E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related XF_0267 0658a86c11b4170a05bdb95b0d72b204 910 Pfam PF12951 Passenger-associated-transport-repeat 377 406 1.5E-8 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat XF_0267 0658a86c11b4170a05bdb95b0d72b204 910 Pfam PF00082 Subtilase family 31 337 1.0E-38 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 XF_0267 0658a86c11b4170a05bdb95b0d72b204 910 Gene3D G3DSA:2.40.128.130 600 908 8.4E-37 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily XF_0267 0658a86c11b4170a05bdb95b0d72b204 910 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 376 407 9.2E-11 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat XF_a0057 d1dc8002edf1ed095f6a587385a7dd5d 92 Pfam PF16509 TrfB plasmid transcriptional repressor 17 90 3.3E-10 T 14-10-2018 IPR032428 TrfB transcriptional repressor protein XF_a0057 d1dc8002edf1ed095f6a587385a7dd5d 92 Gene3D G3DSA:1.10.10.2690 13 92 5.4E-18 T 14-10-2018 XF_0226 cee4fa5642b6a72168fc5c602d47f110 321 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 43 291 2.1E-61 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 XF_0226 cee4fa5642b6a72168fc5c602d47f110 321 Gene3D G3DSA:1.20.1640.10 136 307 3.0E-9 T 14-10-2018 XF_0226 cee4fa5642b6a72168fc5c602d47f110 321 SUPERFAMILY SSF82866 78 296 2.49E-33 T 14-10-2018 XF_0226 cee4fa5642b6a72168fc5c602d47f110 321 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 8.7E-28 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XF_0226 cee4fa5642b6a72168fc5c602d47f110 321 PRINTS PR01755 Bacterial translocase SecF protein signature 42 57 8.7E-28 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XF_0226 cee4fa5642b6a72168fc5c602d47f110 321 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 8.7E-28 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XF_0226 cee4fa5642b6a72168fc5c602d47f110 321 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 8.7E-28 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XF_0226 cee4fa5642b6a72168fc5c602d47f110 321 Pfam PF02355 Protein export membrane protein 131 296 1.3E-47 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial XF_0226 cee4fa5642b6a72168fc5c602d47f110 321 Pfam PF07549 SecD/SecF GG Motif 40 64 7.8E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site XF_0226 cee4fa5642b6a72168fc5c602d47f110 321 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 15 301 25.691 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 XF_1910 290a003a2a2870f9ba75ddea88a01a7e 397 Pfam PF00448 SRP54-type protein, GTPase domain 189 390 1.3E-71 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XF_1910 290a003a2a2870f9ba75ddea88a01a7e 397 SMART SM00962 189 391 2.1E-109 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XF_1910 290a003a2a2870f9ba75ddea88a01a7e 397 SMART SM00963 95 174 2.0E-16 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XF_1910 290a003a2a2870f9ba75ddea88a01a7e 397 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 364 377 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XF_1910 290a003a2a2870f9ba75ddea88a01a7e 397 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 118 390 8.4E-99 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 XF_1910 290a003a2a2870f9ba75ddea88a01a7e 397 Gene3D G3DSA:3.40.50.300 178 379 5.3E-102 T 14-10-2018 XF_1910 290a003a2a2870f9ba75ddea88a01a7e 397 SMART SM00382 188 367 1.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1910 290a003a2a2870f9ba75ddea88a01a7e 397 SUPERFAMILY SSF52540 140 389 9.15E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1910 290a003a2a2870f9ba75ddea88a01a7e 397 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 117 391 59.839 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 XF_1910 290a003a2a2870f9ba75ddea88a01a7e 397 Pfam PF02881 SRP54-type protein, helical bundle domain 105 170 2.6E-12 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XF_1910 290a003a2a2870f9ba75ddea88a01a7e 397 Gene3D G3DSA:1.20.120.140 112 389 5.3E-102 T 14-10-2018 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 SUPERFAMILY SSF46955 403 474 7.87E-17 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 SMART SM00874 402 470 6.8E-25 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 Pfam PF03484 tRNA synthetase B5 domain 407 470 2.7E-16 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 Gene3D G3DSA:3.30.56.10 402 475 2.0E-22 T 14-10-2018 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 Gene3D G3DSA:3.30.56.10 4 180 4.0E-63 T 14-10-2018 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 SMART SM00873 211 384 4.7E-84 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 Pfam PF03483 B3/4 domain 212 384 2.7E-64 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 SMART SM00896 698 791 2.5E-36 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 1.3E-25 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 Gene3D G3DSA:2.40.50.140 39 153 4.0E-63 T 14-10-2018 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 SUPERFAMILY SSF50249 41 191 2.94E-41 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 Gene3D G3DSA:3.30.70.380 699 792 9.5E-25 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 Gene3D G3DSA:3.30.930.10 488 688 2.6E-57 T 14-10-2018 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 SUPERFAMILY SSF56037 196 391 1.07E-68 T 14-10-2018 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 3.1E-225 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 Gene3D G3DSA:3.50.40.10 197 393 1.7E-70 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 Pfam PF01588 Putative tRNA binding domain 45 144 1.5E-22 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 SUPERFAMILY SSF54991 693 791 1.96E-27 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 SUPERFAMILY SSF55681 466 687 9.44E-47 T 14-10-2018 XF_0742 7467df0bf2eea706251fb1e9c1a565a2 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 45.189 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 XF_0139 8634adb8317fb8bd813a288b1143549b 361 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 349 9.0E-70 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 XF_0139 8634adb8317fb8bd813a288b1143549b 361 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 349 9.1E-110 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 XF_1626 b4d095e4827bb575522e8ac52c4d6fe1 252 Pfam PF04397 LytTr DNA-binding domain 148 242 5.9E-22 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 XF_1626 b4d095e4827bb575522e8ac52c4d6fe1 252 SMART SM00448 2 114 7.1E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1626 b4d095e4827bb575522e8ac52c4d6fe1 252 Pfam PF00072 Response regulator receiver domain 4 114 1.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1626 b4d095e4827bb575522e8ac52c4d6fe1 252 Gene3D G3DSA:3.40.50.2300 1 124 3.5E-34 T 14-10-2018 XF_1626 b4d095e4827bb575522e8ac52c4d6fe1 252 SMART SM00850 146 243 9.7E-24 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 XF_1626 b4d095e4827bb575522e8ac52c4d6fe1 252 Gene3D G3DSA:2.40.50.40 137 203 1.9E-9 T 14-10-2018 XF_1626 b4d095e4827bb575522e8ac52c4d6fe1 252 SUPERFAMILY SSF52172 2 120 6.69E-33 T 14-10-2018 IPR011006 CheY-like superfamily XF_1519 ce2c71ba46e543e1b03bb534bb293a43 165 SUPERFAMILY SSF54523 67 163 8.37E-26 T 14-10-2018 XF_1519 ce2c71ba46e543e1b03bb534bb293a43 165 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 39 163 1.5E-28 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 XF_1519 ce2c71ba46e543e1b03bb534bb293a43 165 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 38 58 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_1519 ce2c71ba46e543e1b03bb534bb293a43 165 Gene3D G3DSA:3.30.700.10 65 164 2.7E-23 T 14-10-2018 XF_1519 ce2c71ba46e543e1b03bb534bb293a43 165 Pfam PF08334 Type II secretion system (T2SS), protein G 62 163 1.8E-29 T 14-10-2018 IPR013545 Type II secretion system protein G XF_1519 ce2c71ba46e543e1b03bb534bb293a43 165 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 37 59 9.8E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_1519 ce2c71ba46e543e1b03bb534bb293a43 165 PRINTS PR00813 Bacterial general secretion pathway protein G signature 39 64 1.0E-9 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 XF_1519 ce2c71ba46e543e1b03bb534bb293a43 165 PRINTS PR00813 Bacterial general secretion pathway protein G signature 75 93 1.0E-9 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 XF_2590 4ff2057c95087014717f759fe44f29cd 508 Gene3D G3DSA:1.10.3210.10 317 507 1.0E-49 T 14-10-2018 XF_2590 4ff2057c95087014717f759fe44f29cd 508 Gene3D G3DSA:3.30.420.150 121 301 1.2E-83 T 14-10-2018 XF_2590 4ff2057c95087014717f759fe44f29cd 508 Pfam PF02541 Ppx/GppA phosphatase family 31 314 1.5E-64 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 XF_2590 4ff2057c95087014717f759fe44f29cd 508 PIRSF PIRSF001267 7 508 1.2E-185 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 XF_2590 4ff2057c95087014717f759fe44f29cd 508 SUPERFAMILY SSF53067 142 314 2.04E-44 T 14-10-2018 XF_2590 4ff2057c95087014717f759fe44f29cd 508 Gene3D G3DSA:3.30.420.40 18 309 1.2E-83 T 14-10-2018 XF_2590 4ff2057c95087014717f759fe44f29cd 508 SUPERFAMILY SSF53067 17 137 1.29E-31 T 14-10-2018 XF_2590 4ff2057c95087014717f759fe44f29cd 508 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 17 312 4.5E-97 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 XF_2590 4ff2057c95087014717f759fe44f29cd 508 SUPERFAMILY SSF109604 319 498 4.54E-45 T 14-10-2018 XF_2310 775b0438b50c14a930e69cfddd12e634 211 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 191 3.2E-51 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 XF_2310 775b0438b50c14a930e69cfddd12e634 211 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 3.5E-16 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XF_2310 775b0438b50c14a930e69cfddd12e634 211 Gene3D G3DSA:1.20.120.1760 2 179 1.8E-13 T 14-10-2018 XF_2310 775b0438b50c14a930e69cfddd12e634 211 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XF_2310 775b0438b50c14a930e69cfddd12e634 211 PIRSF PIRSF000847 1 196 4.3E-44 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 XF_1257 02fceff3b2bba6d3f96136993a7e9015 193 SUPERFAMILY SSF53098 10 183 9.22E-43 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily XF_1257 02fceff3b2bba6d3f96136993a7e9015 193 Gene3D G3DSA:3.30.420.10 7 189 3.8E-67 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XF_1257 02fceff3b2bba6d3f96136993a7e9015 193 Hamap MF_00045 Oligoribonuclease [orn]. 9 187 39.476 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 XF_1257 02fceff3b2bba6d3f96136993a7e9015 193 Pfam PF00929 Exonuclease 15 176 4.4E-26 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XF_1257 02fceff3b2bba6d3f96136993a7e9015 193 SMART SM00479 13 186 2.9E-7 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XF_1800 a18fcbfa1b109fbc0d1cd58576b39034 161 SMART SM00450 57 155 2.8E-17 T 14-10-2018 IPR001763 Rhodanese-like domain XF_1800 a18fcbfa1b109fbc0d1cd58576b39034 161 Pfam PF00581 Rhodanese-like domain 59 151 6.2E-17 T 14-10-2018 IPR001763 Rhodanese-like domain XF_1800 a18fcbfa1b109fbc0d1cd58576b39034 161 Gene3D G3DSA:3.40.250.10 55 160 3.9E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily XF_1800 a18fcbfa1b109fbc0d1cd58576b39034 161 SUPERFAMILY SSF52821 37 159 9.3E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily XF_0784 cb73c6ee2b142dcb69d839fc482cfdd2 244 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 30 244 28.137 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 XF_0784 cb73c6ee2b142dcb69d839fc482cfdd2 244 Pfam PF02390 Putative methyltransferase 70 239 3.7E-46 T 14-10-2018 XF_0784 cb73c6ee2b142dcb69d839fc482cfdd2 244 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 59 243 8.8E-42 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 XF_0784 cb73c6ee2b142dcb69d839fc482cfdd2 244 SUPERFAMILY SSF53335 21 241 1.95E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0784 cb73c6ee2b142dcb69d839fc482cfdd2 244 Gene3D G3DSA:3.40.50.150 37 244 1.3E-57 T 14-10-2018 XF_2463 014e658b40d1fa132a62a1fc694dac50 214 Gene3D G3DSA:1.25.40.10 68 210 3.5E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2463 014e658b40d1fa132a62a1fc694dac50 214 Pfam PF13432 Tetratricopeptide repeat 68 119 0.0043 T 14-10-2018 XF_2463 014e658b40d1fa132a62a1fc694dac50 214 Pfam PF13432 Tetratricopeptide repeat 141 178 0.0018 T 14-10-2018 XF_2463 014e658b40d1fa132a62a1fc694dac50 214 SUPERFAMILY SSF48452 70 182 6.56E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_1430 d408cc9c8f5a671b6088a6c983f93ce3 229 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 34 219 2.5E-72 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 XF_1430 d408cc9c8f5a671b6088a6c983f93ce3 229 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 39 223 28.011 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 XF_1430 d408cc9c8f5a671b6088a6c983f93ce3 229 SUPERFAMILY SSF52540 45 223 5.96E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1430 d408cc9c8f5a671b6088a6c983f93ce3 229 Pfam PF01926 50S ribosome-binding GTPase 53 171 2.2E-19 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_1430 d408cc9c8f5a671b6088a6c983f93ce3 229 Gene3D G3DSA:3.40.50.300 30 225 2.2E-52 T 14-10-2018 XF_0940 0e005ae4809136f76b6c22ee71221f7e 260 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 31 258 1.3E-50 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase XF_0940 0e005ae4809136f76b6c22ee71221f7e 260 Gene3D G3DSA:3.60.140.10 3 259 8.9E-76 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily XF_0940 0e005ae4809136f76b6c22ee71221f7e 260 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 26 257 8.3E-68 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase XF_0940 0e005ae4809136f76b6c22ee71221f7e 260 SUPERFAMILY SSF64438 7 258 1.83E-71 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic XF_0883 71f88d206488e11037a0834e1c603ed1 185 SUPERFAMILY SSF48452 77 173 2.37E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_0883 71f88d206488e11037a0834e1c603ed1 185 Gene3D G3DSA:1.25.40.10 47 177 3.5E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_0177 4b779179363dd02884ed1eddc3457dc2 260 Gene3D G3DSA:3.20.20.140 1 256 4.2E-78 T 14-10-2018 XF_0177 4b779179363dd02884ed1eddc3457dc2 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XF_0177 4b779179363dd02884ed1eddc3457dc2 260 PIRSF PIRSF005902 1 258 1.1E-70 T 14-10-2018 IPR001130 TatD family GO:0016788 XF_0177 4b779179363dd02884ed1eddc3457dc2 260 SUPERFAMILY SSF51556 5 255 5.68E-79 T 14-10-2018 IPR032466 Metal-dependent hydrolase XF_0177 4b779179363dd02884ed1eddc3457dc2 260 Pfam PF01026 TatD related DNase 6 253 7.2E-69 T 14-10-2018 IPR001130 TatD family GO:0016788 XF_0177 4b779179363dd02884ed1eddc3457dc2 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XF_0177 4b779179363dd02884ed1eddc3457dc2 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 127 137 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XF_0253 f3bc807fe0a81f3ff71b82fd3d293b37 316 Pfam PF01012 Electron transfer flavoprotein domain 5 174 2.2E-31 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 XF_0253 f3bc807fe0a81f3ff71b82fd3d293b37 316 Gene3D G3DSA:3.40.50.1220 190 316 8.2E-54 T 14-10-2018 XF_0253 f3bc807fe0a81f3ff71b82fd3d293b37 316 SUPERFAMILY SSF52467 194 310 1.26E-46 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily XF_0253 f3bc807fe0a81f3ff71b82fd3d293b37 316 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 258 284 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 XF_0253 f3bc807fe0a81f3ff71b82fd3d293b37 316 SUPERFAMILY SSF52402 4 184 4.05E-40 T 14-10-2018 XF_0253 f3bc807fe0a81f3ff71b82fd3d293b37 316 SMART SM00893 4 187 1.0E-29 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 XF_0253 f3bc807fe0a81f3ff71b82fd3d293b37 316 Gene3D G3DSA:3.40.50.620 4 187 9.8E-41 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0253 f3bc807fe0a81f3ff71b82fd3d293b37 316 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 195 277 1.7E-35 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 XF_0253 f3bc807fe0a81f3ff71b82fd3d293b37 316 PIRSF PIRSF000089 1 316 3.1E-107 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 XF_1320 1ab4b9dfc24776d0c12e0dfca29aa08b 85 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 81 1.3E-25 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 XF_1320 1ab4b9dfc24776d0c12e0dfca29aa08b 85 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 17.049 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 XF_1320 1ab4b9dfc24776d0c12e0dfca29aa08b 85 Pfam PF03776 Septum formation topological specificity factor MinE 13 80 3.0E-21 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 XF_1320 1ab4b9dfc24776d0c12e0dfca29aa08b 85 Gene3D G3DSA:3.30.1070.10 19 78 2.8E-24 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 XF_1320 1ab4b9dfc24776d0c12e0dfca29aa08b 85 SUPERFAMILY SSF55229 32 82 9.15E-13 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 XF_1642 e067451e9e789007f032ebce2169e39b 339 Gene3D G3DSA:1.10.443.10 170 335 1.1E-28 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XF_1642 e067451e9e789007f032ebce2169e39b 339 Gene3D G3DSA:1.10.150.130 64 168 1.5E-7 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal XF_1642 e067451e9e789007f032ebce2169e39b 339 Pfam PF00589 Phage integrase family 177 330 5.0E-16 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XF_1642 e067451e9e789007f032ebce2169e39b 339 SUPERFAMILY SSF56349 65 329 1.44E-48 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XF_2340 dabf62c9961400e55ae6704c477fd023 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:3.30.420.40 181 367 3.3E-164 T 14-10-2018 XF_2340 dabf62c9961400e55ae6704c477fd023 638 SUPERFAMILY SSF100920 385 541 1.44E-57 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:2.60.34.10 384 524 2.8E-61 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 Pfam PF00012 Hsp70 protein 4 600 1.1E-257 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:3.90.640.10 230 317 3.3E-164 T 14-10-2018 XF_2340 dabf62c9961400e55ae6704c477fd023 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 SUPERFAMILY SSF53067 188 383 9.26E-67 T 14-10-2018 XF_2340 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:3.30.420.40 5 380 3.3E-164 T 14-10-2018 XF_2340 dabf62c9961400e55ae6704c477fd023 638 SUPERFAMILY SSF53067 1 184 1.62E-64 T 14-10-2018 XF_2340 dabf62c9961400e55ae6704c477fd023 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 36.056 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 XF_2340 dabf62c9961400e55ae6704c477fd023 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 9.8E-283 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 XF_2340 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:1.20.1270.10 525 603 4.2E-21 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 366 386 2.9E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.9E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 199 209 2.9E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 139 159 2.9E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.9E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 335 351 2.9E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 389 408 2.9E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.9E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XF_2340 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 470 486 2.9E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XF_2699 c64b2f04558a90e19b88677c35e186d4 411 Gene3D G3DSA:1.10.720.10 1 40 7.4E-12 T 14-10-2018 XF_2699 c64b2f04558a90e19b88677c35e186d4 411 SMART SM00382 163 343 3.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_2699 c64b2f04558a90e19b88677c35e186d4 411 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 410 2.1E-205 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 XF_2699 c64b2f04558a90e19b88677c35e186d4 411 SUPERFAMILY SSF50249 42 116 8.57E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2699 c64b2f04558a90e19b88677c35e186d4 411 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 153 356 7.6E-23 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XF_2699 c64b2f04558a90e19b88677c35e186d4 411 Pfam PF07497 Rho termination factor, RNA-binding domain 45 117 6.4E-28 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 XF_2699 c64b2f04558a90e19b88677c35e186d4 411 Pfam PF07498 Rho termination factor, N-terminal domain 1 40 1.5E-11 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 XF_2699 c64b2f04558a90e19b88677c35e186d4 411 Gene3D G3DSA:2.40.50.140 41 116 1.5E-30 T 14-10-2018 XF_2699 c64b2f04558a90e19b88677c35e186d4 411 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 411 234.676 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 XF_2699 c64b2f04558a90e19b88677c35e186d4 411 SMART SM00959 1 40 1.9E-7 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 XF_2699 c64b2f04558a90e19b88677c35e186d4 411 SMART SM00357 45 111 6.8E-15 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 XF_2699 c64b2f04558a90e19b88677c35e186d4 411 Gene3D G3DSA:3.40.50.300 123 410 6.1E-129 T 14-10-2018 XF_2699 c64b2f04558a90e19b88677c35e186d4 411 SUPERFAMILY SSF52540 83 364 3.43E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0629 f561fa9cf369030c78c6948e8eaa4282 236 Pfam PF10137 Predicted nucleotide-binding protein containing TIR-like domain 88 209 4.8E-36 T 14-10-2018 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain XF_0629 f561fa9cf369030c78c6948e8eaa4282 236 PIRSF PIRSF032620 1 233 3.9E-71 T 14-10-2018 IPR014571 Uncharacterised conserved protein UCP032620 XF_1090 814adfbae074670d7d20a0a1e5b99fbc 136 Gene3D G3DSA:1.10.260.40 15 92 7.3E-10 T 14-10-2018 XF_1090 814adfbae074670d7d20a0a1e5b99fbc 136 Pfam PF13560 Helix-turn-helix domain 26 87 3.6E-10 T 14-10-2018 XF_1090 814adfbae074670d7d20a0a1e5b99fbc 136 SUPERFAMILY SSF47413 24 87 3.26E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_1090 814adfbae074670d7d20a0a1e5b99fbc 136 SMART SM00530 29 92 0.001 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_2505 328a00facf0e79ce5cdd2239d6130cb5 819 Pfam PF03288 Poxvirus D5 protein-like 727 794 4.4E-5 T 14-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal XF_2505 328a00facf0e79ce5cdd2239d6130cb5 819 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 456 778 3.6E-81 T 14-10-2018 IPR006500 DNA primase, phage/plasmid XF_2505 328a00facf0e79ce5cdd2239d6130cb5 819 SUPERFAMILY SSF52540 504 665 1.24E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2505 328a00facf0e79ce5cdd2239d6130cb5 819 Pfam PF08706 D5 N terminal like 349 506 2.7E-36 T 14-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XF_2505 328a00facf0e79ce5cdd2239d6130cb5 819 SMART SM00885 348 507 1.5E-53 T 14-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XF_1260 767141c658bcac9ab79abc1b63bf214d 284 Pfam PF03618 Kinase/pyrophosphorylase 18 274 2.4E-69 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 XF_1260 767141c658bcac9ab79abc1b63bf214d 284 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 15 283 72.493 T 14-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein XF_0775 00777653d516674e92b589b66b8c0d8a 326 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 96 251 2.1E-4 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XF_0775 00777653d516674e92b589b66b8c0d8a 326 PIRSF PIRSF028561 1 321 2.7E-166 T 14-10-2018 IPR014548 Predicted acyltransferase XF_0213 074e153f670b8089a9c9c7525c73f86e 264 Gene3D G3DSA:3.20.20.70 1 263 1.4E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_0213 074e153f670b8089a9c9c7525c73f86e 264 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 259 5.3E-94 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 XF_0213 074e153f670b8089a9c9c7525c73f86e 264 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 36.075 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 XF_0213 074e153f670b8089a9c9c7525c73f86e 264 SUPERFAMILY SSF51366 12 262 8.71E-90 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XF_0213 074e153f670b8089a9c9c7525c73f86e 264 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 XF_0858 e58b7beda7c6523c004b01b4925830f8 262 Gene3D G3DSA:3.40.1210.10 1 256 1.7E-93 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XF_0858 e58b7beda7c6523c004b01b4925830f8 262 Pfam PF01975 Survival protein SurE 3 188 1.7E-61 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XF_0858 e58b7beda7c6523c004b01b4925830f8 262 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 239 5.2E-73 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XF_0858 e58b7beda7c6523c004b01b4925830f8 262 SUPERFAMILY SSF64167 1 254 1.7E-83 T 14-10-2018 XF_0858 e58b7beda7c6523c004b01b4925830f8 262 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 256 41.451 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XF_2637 ba57052a7c15a76f4c7bc3d80d5d946a 158 Gene3D G3DSA:1.10.10.2720 89 158 1.1E-25 T 14-10-2018 XF_2637 ba57052a7c15a76f4c7bc3d80d5d946a 158 Pfam PF00298 Ribosomal protein L11, RNA binding domain 88 156 1.4E-22 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 XF_2637 ba57052a7c15a76f4c7bc3d80d5d946a 158 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 52 90 1.0E-16 T 14-10-2018 XF_2637 ba57052a7c15a76f4c7bc3d80d5d946a 158 SUPERFAMILY SSF54747 19 89 1.31E-29 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily XF_2637 ba57052a7c15a76f4c7bc3d80d5d946a 158 Gene3D G3DSA:3.30.1550.10 18 88 1.8E-34 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily XF_2637 ba57052a7c15a76f4c7bc3d80d5d946a 158 SUPERFAMILY SSF46906 84 157 3.53E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily XF_2637 ba57052a7c15a76f4c7bc3d80d5d946a 158 ProSitePatterns PS00359 Ribosomal protein L11 signature. 143 158 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_2637 ba57052a7c15a76f4c7bc3d80d5d946a 158 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 19 157 1.4E-64 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2637 ba57052a7c15a76f4c7bc3d80d5d946a 158 Pfam PF03946 Ribosomal protein L11, N-terminal domain 25 83 2.8E-29 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal XF_2637 ba57052a7c15a76f4c7bc3d80d5d946a 158 SMART SM00649 25 157 7.5E-83 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 XF_2637 ba57052a7c15a76f4c7bc3d80d5d946a 158 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 21 158 31.032 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 XF_1061 8c4e5a9766bb4f470b63f508d3ccdc3b 219 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 11 212 1.5E-83 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 XF_1061 8c4e5a9766bb4f470b63f508d3ccdc3b 219 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 42 51 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 XF_1061 8c4e5a9766bb4f470b63f508d3ccdc3b 219 Pfam PF01081 KDPG and KHG aldolase 12 203 5.5E-63 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 XF_1061 8c4e5a9766bb4f470b63f508d3ccdc3b 219 Gene3D G3DSA:3.20.20.70 1 216 4.7E-69 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_1061 8c4e5a9766bb4f470b63f508d3ccdc3b 219 SUPERFAMILY SSF51569 7 213 3.3E-61 T 14-10-2018 XF_2302 2b2c494239390195bbdc360bf5e51ef2 444 Gene3D G3DSA:3.90.1150.10 9 419 3.5E-174 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XF_2302 2b2c494239390195bbdc360bf5e51ef2 444 SUPERFAMILY SSF53383 1 425 7.9E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XF_2302 2b2c494239390195bbdc360bf5e51ef2 444 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XF_2302 2b2c494239390195bbdc360bf5e51ef2 444 Pfam PF00202 Aminotransferase class-III 35 396 7.3E-76 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XF_2302 2b2c494239390195bbdc360bf5e51ef2 444 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 427 101.854 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 XF_2302 2b2c494239390195bbdc360bf5e51ef2 444 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 9.8E-187 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 XF_2302 2b2c494239390195bbdc360bf5e51ef2 444 Gene3D G3DSA:3.40.640.10 71 319 3.5E-174 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XF_0223 514f8a97a8a4b599b46204b8562bc11d 403 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 25 386 2.0E-143 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XF_0223 514f8a97a8a4b599b46204b8562bc11d 403 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 25 386 2.2E-149 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XF_0223 514f8a97a8a4b599b46204b8562bc11d 403 Pfam PF01702 Queuine tRNA-ribosyltransferase 148 384 1.3E-83 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XF_0223 514f8a97a8a4b599b46204b8562bc11d 403 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 23 387 54.902 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XF_0223 514f8a97a8a4b599b46204b8562bc11d 403 SUPERFAMILY SSF51713 22 385 8.89E-148 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XF_0223 514f8a97a8a4b599b46204b8562bc11d 403 Gene3D G3DSA:3.20.20.105 14 388 6.6E-153 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XF_0924 b13f7ca98b7def7bd9759d381a6da3a5 387 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 84 298 1.6E-70 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 XF_0924 b13f7ca98b7def7bd9759d381a6da3a5 387 SUPERFAMILY SSF102405 93 297 1.81E-39 T 14-10-2018 XF_0924 b13f7ca98b7def7bd9759d381a6da3a5 387 Gene3D G3DSA:1.10.10.10 313 383 1.4E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_0924 b13f7ca98b7def7bd9759d381a6da3a5 387 Pfam PF02481 DNA recombination-mediator protein A 89 290 3.3E-72 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 XF_0924 b13f7ca98b7def7bd9759d381a6da3a5 387 Gene3D G3DSA:3.40.50.450 3 303 7.2E-94 T 14-10-2018 XF_1093 bf3d8d26d664c4b1c491f770cc92e2e8 161 Gene3D G3DSA:3.40.50.1170 1 159 1.1E-28 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 XF_1093 bf3d8d26d664c4b1c491f770cc92e2e8 161 SUPERFAMILY SSF53774 1 152 9.16E-33 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 XF_1093 bf3d8d26d664c4b1c491f770cc92e2e8 161 PRINTS PR00139 Asparaginase/glutaminase family signature 75 93 3.0E-5 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XF_1093 bf3d8d26d664c4b1c491f770cc92e2e8 161 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 3.0E-5 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XF_1093 bf3d8d26d664c4b1c491f770cc92e2e8 161 Pfam PF00710 Asparaginase, N-terminal 4 152 2.7E-23 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 XF_1131 db20b5db95b9bf9ae6c514abbb279a82 428 Pfam PF01523 Putative modulator of DNA gyrase 12 304 1.3E-52 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 XF_1131 db20b5db95b9bf9ae6c514abbb279a82 428 Gene3D G3DSA:3.30.2290.10 1 212 6.7E-81 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal XF_1131 db20b5db95b9bf9ae6c514abbb279a82 428 SUPERFAMILY SSF111283 1 427 1.12E-113 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 SUPERFAMILY SSF55186 594 751 2.22E-48 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 Gene3D G3DSA:3.30.54.20 664 716 1.6E-47 T 14-10-2018 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 Gene3D G3DSA:3.30.980.10 603 736 1.6E-47 T 14-10-2018 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 SUPERFAMILY SSF101353 290 480 2.09E-57 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 Gene3D G3DSA:3.30.930.10 39 286 2.6E-118 T 14-10-2018 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 Pfam PF02272 DHHA1 domain 772 911 7.7E-23 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 693 735 5.4E-17 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 SUPERFAMILY SSF55681 39 289 2.98E-106 T 14-10-2018 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 SUPERFAMILY SSF50447 491 590 2.4E-16 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 Pfam PF01411 tRNA synthetases class II (A) 43 592 4.9E-212 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 43 894 2.7E-295 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 Gene3D G3DSA:2.40.30.130 508 592 1.3E-8 T 14-10-2018 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 PRINTS PR00980 Alanyl-tRNA synthetase signature 112 123 1.3E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 PRINTS PR00980 Alanyl-tRNA synthetase signature 243 254 1.3E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 PRINTS PR00980 Alanyl-tRNA synthetase signature 340 353 1.3E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 PRINTS PR00980 Alanyl-tRNA synthetase signature 316 332 1.3E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 PRINTS PR00980 Alanyl-tRNA synthetase signature 270 283 1.3E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 38 915 183.08 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 SMART SM00863 693 735 2.2E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XF_0124 17ff71727492c9e15e5ac6fa884200ac 916 Gene3D G3DSA:3.10.310.40 803 912 2.1E-21 T 14-10-2018 XF_1253 585e6911a135f272d539f1191411dce5 325 Gene3D G3DSA:3.40.50.1820 3 325 2.5E-98 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1253 585e6911a135f272d539f1191411dce5 325 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 90 106 - T 14-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 XF_1253 585e6911a135f272d539f1191411dce5 325 SUPERFAMILY SSF53474 38 321 9.21E-70 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1253 585e6911a135f272d539f1191411dce5 325 Pfam PF07859 alpha/beta hydrolase fold 91 297 1.5E-71 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 Pfam PF00549 CoA-ligase 152 270 9.8E-19 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 2.3E-138 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 Pfam PF02629 CoA binding domain 6 99 3.2E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 SUPERFAMILY SSF51735 1 123 2.25E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 289 43.35 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 Gene3D G3DSA:3.40.50.720 2 124 3.7E-52 T 14-10-2018 XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 153 182 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 SUPERFAMILY SSF52210 124 289 4.19E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 Gene3D G3DSA:3.40.50.261 125 290 6.7E-72 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 PIRSF PIRSF001553 1 290 4.1E-130 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 SMART SM00881 4 100 1.3E-35 T 14-10-2018 IPR003781 CoA-binding GO:0048037 XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 PRINTS PR01798 Succinyl-CoA synthase signature 178 196 3.1E-35 T 14-10-2018 XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 3.1E-35 T 14-10-2018 XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 3.1E-35 T 14-10-2018 XF_2548 ffd0a9448a48a6333a3be9426cef1e8d 290 PRINTS PR01798 Succinyl-CoA synthase signature 209 222 3.1E-35 T 14-10-2018 XF_1231 f9ca725753ab7e1e3fd42759215992d9 617 Gene3D G3DSA:3.10.20.310 223 299 1.2E-14 T 14-10-2018 XF_1231 f9ca725753ab7e1e3fd42759215992d9 617 Gene3D G3DSA:3.10.20.310 50 134 6.4E-6 T 14-10-2018 XF_1231 f9ca725753ab7e1e3fd42759215992d9 617 Pfam PF01103 Surface antigen 328 605 1.8E-30 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 XF_1231 f9ca725753ab7e1e3fd42759215992d9 617 Gene3D G3DSA:3.10.20.310 135 222 3.8E-19 T 14-10-2018 XF_1231 f9ca725753ab7e1e3fd42759215992d9 617 Pfam PF17243 POTRA domain TamA domain 1 52 132 5.8E-15 T 14-10-2018 IPR035243 TamA, POTRA domain 1 XF_1231 f9ca725753ab7e1e3fd42759215992d9 617 Pfam PF07244 Surface antigen variable number repeat 144 204 4.3E-6 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XF_1231 f9ca725753ab7e1e3fd42759215992d9 617 Gene3D G3DSA:2.40.160.50 300 617 8.3E-77 T 14-10-2018 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Gene3D G3DSA:2.40.50.180 1502 1563 5.9E-29 T 14-10-2018 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Pfam PF01584 CheW-like domain 1483 1610 4.4E-19 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 SUPERFAMILY SSF47226 971 1090 1.7E-24 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 SUPERFAMILY SSF55874 1295 1476 7.99E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Gene3D G3DSA:3.30.565.10 1292 1478 1.1E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Gene3D G3DSA:1.20.120.160 726 867 6.4E-7 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Gene3D G3DSA:1.20.120.160 970 1096 1.2E-23 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 SUPERFAMILY SSF52172 1630 1752 2.56E-34 T 14-10-2018 IPR011006 CheY-like superfamily XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1157 1292 6.6E-6 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 SMART SM01231 1155 1293 1.5E-10 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1439 1457 1.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1463 1476 1.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1383 1397 1.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 SMART SM00073 969 1066 2.7E-13 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 SMART SM00073 568 666 3.0E-4 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 SUPERFAMILY SSF47226 327 445 4.71E-7 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Gene3D G3DSA:2.30.30.40 1479 1603 5.9E-29 T 14-10-2018 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Pfam PF00072 Response regulator receiver domain 1633 1744 1.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Pfam PF01627 Hpt domain 571 659 2.4E-14 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Pfam PF01627 Hpt domain 971 1071 5.0E-14 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Pfam PF01627 Hpt domain 49 148 6.9E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Pfam PF01627 Hpt domain 729 818 1.8E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Gene3D G3DSA:1.20.120.160 565 695 4.5E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 SUPERFAMILY SSF47226 567 671 6.93E-22 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 SUPERFAMILY SSF50341 1478 1607 6.28E-24 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1342 1478 4.1E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 SMART SM00260 1471 1608 2.7E-21 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 SUPERFAMILY SSF47226 726 841 2.36E-13 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 SMART SM00448 1631 1744 9.1E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 SMART SM00387 1338 1479 5.2E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 SUPERFAMILY SSF47226 49 170 2.49E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 XF_1952 7a7759da30ef1fa57789fdfeec3af7eb 1755 Gene3D G3DSA:3.40.50.12740 1632 1755 8.3E-36 T 14-10-2018 XF_2774 b9160748ca81fe0cf68c87e47476a2bf 126 Gene3D G3DSA:1.10.3510.10 2 124 2.0E-13 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_2774 b9160748ca81fe0cf68c87e47476a2bf 126 Pfam PF04591 Protein of unknown function, DUF596 56 124 8.7E-23 T 14-10-2018 IPR007670 Protein of unknown function DUF596 XF_2774 b9160748ca81fe0cf68c87e47476a2bf 126 SUPERFAMILY SSF160472 1 119 1.03E-35 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_1374 ecd59cb3cf483282b1c1c2487923eafc 229 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 17 220 35.438 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 XF_1374 ecd59cb3cf483282b1c1c2487923eafc 229 Gene3D G3DSA:3.20.20.70 15 223 5.7E-58 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_1374 ecd59cb3cf483282b1c1c2487923eafc 229 SUPERFAMILY SSF51366 17 218 9.26E-54 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XF_1374 ecd59cb3cf483282b1c1c2487923eafc 229 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 20 215 3.6E-41 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 SUPERFAMILY SSF51120 1046 1204 4.97E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 SUPERFAMILY SSF103647 377 474 8.76E-6 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Gene3D G3DSA:2.150.10.10 1040 1095 4.6E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Gene3D G3DSA:2.150.10.10 1373 1428 6.8E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Gene3D G3DSA:2.150.10.10 1706 1760 7.2E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 860 878 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1883 1901 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 887 905 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Gene3D G3DSA:2.150.10.10 1545 1595 8.8E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 SUPERFAMILY SSF51120 1378 1536 4.06E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1551 1569 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF06594 Haemolysin-type calcium binding protein related domain 993 1037 3.5E-13 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1823 1867 6.7E-13 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1657 1701 6.7E-13 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1989 2027 1.1E-9 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1491 1535 6.7E-13 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1325 1369 6.7E-13 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1159 1203 6.7E-13 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Gene3D G3DSA:2.150.10.10 1873 1925 7.9E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1717 1735 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 878 896 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 SUPERFAMILY SSF51120 1710 1868 9.68E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Gene3D G3DSA:2.150.10.10 1208 1372 2.6E-30 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Gene3D G3DSA:2.150.10.10 1596 1705 3.0E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Gene3D G3DSA:2.150.10.10 1096 1207 4.1E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Gene3D G3DSA:2.150.10.10 1926 2041 4.7E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Gene3D G3DSA:2.150.10.10 1761 1872 7.3E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Gene3D G3DSA:2.150.10.10 899 1039 6.6E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Gene3D G3DSA:2.150.10.10 837 898 9.5E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Gene3D G3DSA:2.150.10.10 1429 1544 4.7E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 SUPERFAMILY SSF51120 839 1038 7.43E-32 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 SUPERFAMILY SSF51120 1544 1702 6.28E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1933 1949 0.34 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1767 1783 2.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1601 1617 0.34 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 909 925 0.068 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1905 1921 0.85 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1435 1451 0.34 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1103 1119 0.34 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1739 1755 0.85 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1573 1589 0.85 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1048 1064 0.17 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 872 889 0.005 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1623 1638 11.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1878 1894 0.17 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1269 1285 0.34 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1380 1396 0.17 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1546 1562 0.17 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1712 1728 0.17 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1789 1804 11.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1075 1091 0.85 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 855 871 0.16 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1457 1472 3.6 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1214 1230 0.17 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1407 1423 0.85 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1125 1140 3.6 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 937 953 2.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1291 1306 3.6 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 959 974 7.8 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 837 853 20.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1241 1257 0.85 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1955 1970 11.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 890 907 0.24 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 SUPERFAMILY SSF51120 1212 1370 4.01E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1385 1403 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 PRINTS PR00313 NodO calcium binding signature 1084 1093 3.1E-9 T 14-10-2018 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 PRINTS PR00313 NodO calcium binding signature 918 926 3.1E-9 T 14-10-2018 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 PRINTS PR00313 NodO calcium binding signature 870 881 3.1E-9 T 14-10-2018 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 PRINTS PR00313 NodO calcium binding signature 900 908 3.1E-9 T 14-10-2018 XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 SUPERFAMILY SSF51120 1876 2025 3.92E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1053 1071 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_2407 17bec2698aa48b859551d8425dafdfa2 2064 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1219 1237 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_0580 3e2c2b15c86e270989f10fe514c9afbb 217 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 9 188 9.7E-37 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 XF_0580 3e2c2b15c86e270989f10fe514c9afbb 217 Pfam PF02223 Thymidylate kinase 14 188 1.5E-35 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 XF_0580 3e2c2b15c86e270989f10fe514c9afbb 217 Hamap MF_00165 Thymidylate kinase [tmk]. 10 200 20.782 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 XF_0580 3e2c2b15c86e270989f10fe514c9afbb 217 SUPERFAMILY SSF52540 9 200 9.23E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0580 3e2c2b15c86e270989f10fe514c9afbb 217 Gene3D G3DSA:3.40.50.300 8 202 1.8E-44 T 14-10-2018 XF_0942 b3633948eb7b25a70d10092f92265ab7 562 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 41 524 3.3E-196 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 XF_0942 b3633948eb7b25a70d10092f92265ab7 562 Gene3D G3DSA:3.30.9.10 146 305 4.7E-7 T 14-10-2018 XF_0942 b3633948eb7b25a70d10092f92265ab7 562 Gene3D G3DSA:3.50.50.60 43 297 4.7E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_0942 b3633948eb7b25a70d10092f92265ab7 562 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 41 526 1.9E-223 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 XF_0942 b3633948eb7b25a70d10092f92265ab7 562 SUPERFAMILY SSF51905 20 359 2.85E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_0942 b3633948eb7b25a70d10092f92265ab7 562 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 37 526 53.14 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 XF_2055 720b74d4330ef686e018b99a9e8556ea 144 Pfam PF04956 TrbC/VIRB2 family 27 119 3.9E-17 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 XF_0789 5e9f7fc62f45e0e883077c354c11ed3c 170 Gene3D G3DSA:2.40.330.20 20 163 2.3E-31 T 14-10-2018 IPR038619 MraZ superfamily XF_0789 5e9f7fc62f45e0e883077c354c11ed3c 170 Pfam PF02381 MraZ protein, putative antitoxin-like 24 94 2.6E-8 T 14-10-2018 IPR020603 MraZ domain XF_0789 5e9f7fc62f45e0e883077c354c11ed3c 170 Pfam PF02381 MraZ protein, putative antitoxin-like 107 155 3.2E-11 T 14-10-2018 IPR020603 MraZ domain XF_0789 5e9f7fc62f45e0e883077c354c11ed3c 170 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 23 147 2.0E-68 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 XF_0789 5e9f7fc62f45e0e883077c354c11ed3c 170 SUPERFAMILY SSF89447 21 158 3.35E-33 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily XF_0789 5e9f7fc62f45e0e883077c354c11ed3c 170 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 170 41.108 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 XF_2305 b3dcfc7f48ed5c2a3dfe0eaa1f412784 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 121 6.0E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain XF_2305 b3dcfc7f48ed5c2a3dfe0eaa1f412784 127 Gene3D G3DSA:3.10.180.10 6 127 1.7E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XF_2305 b3dcfc7f48ed5c2a3dfe0eaa1f412784 127 SUPERFAMILY SSF54593 1 121 5.5E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XF_0849 f0762e7869bea692a07ac9d61908e36e 155 Pfam PF01641 SelR domain 20 136 2.8E-46 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 XF_0849 f0762e7869bea692a07ac9d61908e36e 155 SUPERFAMILY SSF51316 15 140 3.84E-52 T 14-10-2018 IPR011057 Mss4-like superfamily XF_0849 f0762e7869bea692a07ac9d61908e36e 155 Gene3D G3DSA:2.170.150.20 11 154 5.1E-56 T 14-10-2018 XF_0849 f0762e7869bea692a07ac9d61908e36e 155 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 11 137 35.364 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 XF_0849 f0762e7869bea692a07ac9d61908e36e 155 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 16 137 8.3E-48 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 XF_0793 d555fdd41c87c4fd95b4c88624fbd7fa 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 20 485 1.1E-149 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 XF_0793 d555fdd41c87c4fd95b4c88624fbd7fa 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 485 34.087 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 XF_0793 d555fdd41c87c4fd95b4c88624fbd7fa 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 415 2.5E-18 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XF_0793 d555fdd41c87c4fd95b4c88624fbd7fa 495 Pfam PF08245 Mur ligase middle domain 109 311 1.3E-47 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XF_0793 d555fdd41c87c4fd95b4c88624fbd7fa 495 Gene3D G3DSA:3.40.1390.10 5 99 3.3E-19 T 14-10-2018 XF_0793 d555fdd41c87c4fd95b4c88624fbd7fa 495 Gene3D G3DSA:3.40.1190.10 100 335 7.5E-81 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XF_0793 d555fdd41c87c4fd95b4c88624fbd7fa 495 Gene3D G3DSA:3.90.190.20 340 494 4.1E-55 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XF_0793 d555fdd41c87c4fd95b4c88624fbd7fa 495 Pfam PF01225 Mur ligase family, catalytic domain 22 97 2.8E-10 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XF_0793 d555fdd41c87c4fd95b4c88624fbd7fa 495 SUPERFAMILY SSF53623 100 331 5.63E-77 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XF_0793 d555fdd41c87c4fd95b4c88624fbd7fa 495 SUPERFAMILY SSF53244 332 486 9.94E-46 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XF_0793 d555fdd41c87c4fd95b4c88624fbd7fa 495 SUPERFAMILY SSF63418 7 100 2.88E-19 T 14-10-2018 IPR035911 MurE/MurF, N-terminal XF_2656 29782e711b7ffda564daf9550312acb7 189 SMART SM00644 16 159 3.0E-29 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XF_2656 29782e711b7ffda564daf9550312acb7 189 Gene3D G3DSA:3.40.80.10 17 183 1.5E-30 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XF_2656 29782e711b7ffda564daf9550312acb7 189 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 26 170 6.7E-22 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XF_2656 29782e711b7ffda564daf9550312acb7 189 SUPERFAMILY SSF55846 21 181 7.72E-33 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XF_0767 7c24c8abb0446693974c84607e26b847 114 Gene3D G3DSA:1.10.10.10 13 114 2.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_0767 7c24c8abb0446693974c84607e26b847 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 44 3.7E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XF_0767 7c24c8abb0446693974c84607e26b847 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 3.7E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XF_0767 7c24c8abb0446693974c84607e26b847 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 3.7E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XF_0767 7c24c8abb0446693974c84607e26b847 114 SMART SM00418 27 105 6.4E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XF_0767 7c24c8abb0446693974c84607e26b847 114 SUPERFAMILY SSF46785 13 109 2.95E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_0767 7c24c8abb0446693974c84607e26b847 114 Pfam PF12840 Helix-turn-helix domain 27 82 2.8E-11 T 14-10-2018 XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 ProSitePatterns PS01275 Elongation factor P signature. 157 176 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 Gene3D G3DSA:2.40.50.140 71 132 4.1E-29 T 14-10-2018 XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 Hamap MF_00141 Elongation factor P [efp]. 8 192 47.709 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 TIGRFAM TIGR00038 efp: translation elongation factor P 11 192 4.6E-73 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 Pfam PF01132 Elongation factor P (EF-P) OB domain 76 128 3.0E-21 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 SUPERFAMILY SSF50249 74 133 1.84E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 Gene3D G3DSA:2.30.30.30 2 70 1.2E-19 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 SMART SM00841 136 191 6.7E-34 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 11 67 5.4E-19 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 SMART SM01185 74 128 4.3E-21 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 SUPERFAMILY SSF50104 5 68 1.5E-15 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 SUPERFAMILY SSF50249 135 192 2.57E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 PIRSF PIRSF005901 7 193 1.0E-62 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 Gene3D G3DSA:2.40.50.140 135 193 2.4E-28 T 14-10-2018 XF_2473 fd4e43a4e15e8fc6d68c63f9cfa34f8d 193 Pfam PF09285 Elongation factor P, C-terminal 136 191 3.5E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XF_1334 0886756ef9fb44e6bfefb5a0676a5e75 394 SUPERFAMILY SSF56796 14 368 3.14E-109 T 14-10-2018 XF_1334 0886756ef9fb44e6bfefb5a0676a5e75 394 Gene3D G3DSA:1.20.1090.10 180 373 7.6E-62 T 14-10-2018 XF_1334 0886756ef9fb44e6bfefb5a0676a5e75 394 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 18 366 9.7E-110 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 XF_1334 0886756ef9fb44e6bfefb5a0676a5e75 394 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 368 66.278 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 XF_1334 0886756ef9fb44e6bfefb5a0676a5e75 394 Pfam PF01761 3-dehydroquinate synthase 74 337 2.2E-102 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 XF_1334 0886756ef9fb44e6bfefb5a0676a5e75 394 PIRSF PIRSF001455 24 376 2.7E-104 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 XF_1334 0886756ef9fb44e6bfefb5a0676a5e75 394 Gene3D G3DSA:3.40.50.1970 3 179 1.4E-60 T 14-10-2018 XF_2647 0cc9de0ee924633b816e0b88b77a09a3 559 SUPERFAMILY SSF48452 205 363 1.09E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2647 0cc9de0ee924633b816e0b88b77a09a3 559 Gene3D G3DSA:1.25.40.10 376 556 2.3E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2647 0cc9de0ee924633b816e0b88b77a09a3 559 SMART SM00028 412 445 2.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2647 0cc9de0ee924633b816e0b88b77a09a3 559 SMART SM00028 446 480 220.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2647 0cc9de0ee924633b816e0b88b77a09a3 559 SMART SM00028 514 547 2.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2647 0cc9de0ee924633b816e0b88b77a09a3 559 SUPERFAMILY SSF48452 379 549 5.63E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2647 0cc9de0ee924633b816e0b88b77a09a3 559 Pfam PF13432 Tetratricopeptide repeat 462 504 0.014 T 14-10-2018 XF_2647 0cc9de0ee924633b816e0b88b77a09a3 559 Pfam PF13432 Tetratricopeptide repeat 385 445 0.011 T 14-10-2018 XF_1830 f96917b8ff544924c8a47f7452d1ed18 442 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 264 417 2.0E-22 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal XF_1830 f96917b8ff544924c8a47f7452d1ed18 442 SMART SM00833 264 417 4.4E-41 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal XF_1830 f96917b8ff544924c8a47f7452d1ed18 442 Gene3D G3DSA:3.40.50.300 10 237 4.3E-67 T 14-10-2018 XF_1830 f96917b8ff544924c8a47f7452d1ed18 442 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 13 218 3.2E-57 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain XF_1830 f96917b8ff544924c8a47f7452d1ed18 442 SUPERFAMILY SSF52540 11 317 2.57E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1946 dd60dda72e114211d13af17a594bb1a0 441 Pfam PF08245 Mur ligase middle domain 57 200 7.0E-10 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XF_1946 dd60dda72e114211d13af17a594bb1a0 441 Gene3D G3DSA:3.40.1190.10 6 293 9.5E-84 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XF_1946 dd60dda72e114211d13af17a594bb1a0 441 Gene3D G3DSA:3.90.190.20 295 431 2.4E-23 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XF_1946 dd60dda72e114211d13af17a594bb1a0 441 PIRSF PIRSF001563 8 433 9.1E-99 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 XF_1946 dd60dda72e114211d13af17a594bb1a0 441 SUPERFAMILY SSF53623 13 291 7.79E-84 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XF_1946 dd60dda72e114211d13af17a594bb1a0 441 TIGRFAM TIGR01499 folC: bifunctional protein FolC 35 425 3.7E-92 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 XF_1946 dd60dda72e114211d13af17a594bb1a0 441 SUPERFAMILY SSF53244 295 430 9.34E-25 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XF_1121 d7a1f480bf2af892f501c6dfb21e6fb4 275 SUPERFAMILY SSF51730 3 274 4.9E-87 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like XF_1121 d7a1f480bf2af892f501c6dfb21e6fb4 275 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 4 273 8.9E-98 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 XF_1121 d7a1f480bf2af892f501c6dfb21e6fb4 275 Gene3D G3DSA:3.20.20.220 1 275 1.5E-93 T 14-10-2018 XF_1121 d7a1f480bf2af892f501c6dfb21e6fb4 275 Pfam PF02219 Methylenetetrahydrofolate reductase 4 274 8.8E-83 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 XF_2137 34291de4f619b7247a1def320012bf28 788 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 169 1.1E-23 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain XF_2137 34291de4f619b7247a1def320012bf28 788 SUPERFAMILY SSF56935 34 788 1.65E-96 T 14-10-2018 XF_2137 34291de4f619b7247a1def320012bf28 788 Gene3D G3DSA:2.170.130.10 29 173 1.2E-35 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XF_2137 34291de4f619b7247a1def320012bf28 788 Gene3D G3DSA:2.40.170.20 177 762 2.5E-53 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XF_2137 34291de4f619b7247a1def320012bf28 788 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 14-10-2018 IPR010916 TonB box, conserved site XF_2137 34291de4f619b7247a1def320012bf28 788 Pfam PF00593 TonB dependent receptor 280 770 1.5E-44 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XF_1388 5753a9e608d023d40b4fc1649fe23f65 202 SUPERFAMILY SSF81452 12 200 5.1E-57 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1388 5753a9e608d023d40b4fc1649fe23f65 202 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 23 202 2.3E-82 T 14-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 XF_1388 5753a9e608d023d40b4fc1649fe23f65 202 Gene3D G3DSA:1.20.120.80 17 202 2.1E-58 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1388 5753a9e608d023d40b4fc1649fe23f65 202 Pfam PF00510 Cytochrome c oxidase subunit III 23 200 3.6E-13 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1411 4614f1bd71492631b758d052b825fcbc 189 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 11 184 3.4E-43 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related XF_1411 4614f1bd71492631b758d052b825fcbc 189 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 186 20.51 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 XF_1411 4614f1bd71492631b758d052b825fcbc 189 Gene3D G3DSA:2.60.450.10 60 188 1.3E-13 T 14-10-2018 XF_1411 4614f1bd71492631b758d052b825fcbc 189 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 9 183 9.0E-43 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 Pfam PF02096 60Kd inner membrane protein 370 549 4.7E-56 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 552 21.218 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 Gene3D G3DSA:2.70.98.90 73 347 2.4E-69 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 Pfam PF14849 YidC periplasmic domain 77 358 1.2E-64 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 367 2.6E-60 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR01900 YidC translocation/secretion protein signature 505 529 9.7E-15 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR01900 YidC translocation/secretion protein signature 484 499 9.7E-15 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR01900 YidC translocation/secretion protein signature 355 371 9.7E-15 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 369 549 1.6E-65 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR00701 60kDa inner membrane protein signature 2 23 9.6E-48 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR00701 60kDa inner membrane protein signature 431 454 9.6E-48 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR00701 60kDa inner membrane protein signature 516 539 9.6E-48 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR00701 60kDa inner membrane protein signature 172 192 9.6E-48 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR00701 60kDa inner membrane protein signature 230 248 9.6E-48 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR00701 60kDa inner membrane protein signature 478 500 9.6E-48 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XF_2780 1fa25a971aa7ce17d79330ff0f17a76e 565 PRINTS PR00701 60kDa inner membrane protein signature 264 279 9.6E-48 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 XF_0719 047ac53806442d3a0db8da7b9f0c5409 195 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 118 5.3E-34 T 14-10-2018 IPR006531 Gp5 N-terminal XF_0719 047ac53806442d3a0db8da7b9f0c5409 195 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 193 2.4E-63 T 14-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 XF_0719 047ac53806442d3a0db8da7b9f0c5409 195 Gene3D G3DSA:2.60.220.40 90 157 3.4E-12 T 14-10-2018 XF_0719 047ac53806442d3a0db8da7b9f0c5409 195 Gene3D G3DSA:2.40.50.230 1 87 1.8E-26 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XF_1823 170e6b61b11d7a6049edee73d3ce1280 727 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 555 702 6.3E-32 T 14-10-2018 IPR020992 Tail specific protease, C-terminal XF_1823 170e6b61b11d7a6049edee73d3ce1280 727 Gene3D G3DSA:2.30.42.10 238 322 5.0E-12 T 14-10-2018 XF_1823 170e6b61b11d7a6049edee73d3ce1280 727 SUPERFAMILY SSF52096 171 554 2.32E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XF_1823 170e6b61b11d7a6049edee73d3ce1280 727 Pfam PF03572 Peptidase family S41 366 548 2.5E-53 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XF_1823 170e6b61b11d7a6049edee73d3ce1280 727 Gene3D G3DSA:3.90.226.10 328 569 2.0E-59 T 14-10-2018 XF_1823 170e6b61b11d7a6049edee73d3ce1280 727 SUPERFAMILY SSF50156 247 319 2.51E-10 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 XF_1823 170e6b61b11d7a6049edee73d3ce1280 727 SMART SM00245 330 550 4.8E-48 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XF_1823 170e6b61b11d7a6049edee73d3ce1280 727 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 242 320 1.2E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 XF_1823 170e6b61b11d7a6049edee73d3ce1280 727 SMART SM00228 247 325 6.4E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 XF_1823 170e6b61b11d7a6049edee73d3ce1280 727 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 204 569 6.0E-88 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 XF_1721 dcd9dcd087b7f83a9536973cf22a5d75 130 SUPERFAMILY SSF53850 1 128 2.9E-16 T 14-10-2018 XF_1721 dcd9dcd087b7f83a9536973cf22a5d75 130 Pfam PF03466 LysR substrate binding domain 1 128 1.6E-16 T 14-10-2018 IPR005119 LysR, substrate-binding XF_1721 dcd9dcd087b7f83a9536973cf22a5d75 130 Gene3D G3DSA:3.40.190.10 1 101 3.3E-17 T 14-10-2018 XF_a0027 9ad7a8dd2d341058aed727ece737f25e 108 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 103 3.8E-23 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 XF_a0027 9ad7a8dd2d341058aed727ece737f25e 108 PIRSF PIRSF033490 1 106 2.4E-32 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 XF_a0027 9ad7a8dd2d341058aed727ece737f25e 108 Gene3D G3DSA:2.30.30.110 1 108 3.2E-27 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor XF_a0027 9ad7a8dd2d341058aed727ece737f25e 108 SUPERFAMILY SSF50118 2 106 8.94E-28 T 14-10-2018 XF_2045 8d5e8905d346d115bd5cf523c6837ceb 201 SUPERFAMILY SSF53955 7 124 3.44E-24 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_0696 9106ed71bf82f87a72e810ead41f169d 221 Pfam PF00717 Peptidase S24-like 138 193 1.4E-7 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XF_0696 9106ed71bf82f87a72e810ead41f169d 221 SUPERFAMILY SSF47413 2 68 3.38E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_0696 9106ed71bf82f87a72e810ead41f169d 221 SMART SM00530 9 63 1.3E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_0696 9106ed71bf82f87a72e810ead41f169d 221 Gene3D G3DSA:1.10.260.40 4 72 1.1E-16 T 14-10-2018 XF_0696 9106ed71bf82f87a72e810ead41f169d 221 SUPERFAMILY SSF51306 114 212 3.53E-15 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XF_0696 9106ed71bf82f87a72e810ead41f169d 221 Pfam PF01381 Helix-turn-helix 10 63 3.4E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 489 795 6.2E-60 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 26 352 2.4E-114 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 Gene3D G3DSA:3.50.30.10 366 484 9.4E-40 T 14-10-2018 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 13 796 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 Pfam PF00391 PEP-utilising enzyme, mobile domain 391 462 4.6E-25 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 701 719 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 SUPERFAMILY SSF56059 10 392 4.71E-104 T 14-10-2018 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 421 432 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 PIRSF PIRSF000854 8 799 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 SUPERFAMILY SSF52009 355 473 5.62E-34 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 SUPERFAMILY SSF51621 469 796 1.52E-94 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 718 733 5.1E-5 T 14-10-2018 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 701 716 5.1E-5 T 14-10-2018 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 754 766 5.1E-5 T 14-10-2018 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 Gene3D G3DSA:3.20.20.60 485 797 6.1E-99 T 14-10-2018 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 Gene3D G3DSA:3.30.1490.20 9 202 3.5E-70 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XF_1259 540fde3e5e5bf2adfaa0abcd3f0beddb 799 Gene3D G3DSA:3.30.470.20 203 364 8.0E-56 T 14-10-2018 XF_0250 50c8e6b77df49b5f82f2fed5900af5d6 304 SUPERFAMILY SSF103481 195 290 1.28E-8 T 14-10-2018 XF_0250 50c8e6b77df49b5f82f2fed5900af5d6 304 SUPERFAMILY SSF103481 46 140 3.27E-7 T 14-10-2018 XF_0250 50c8e6b77df49b5f82f2fed5900af5d6 304 Pfam PF00892 EamA-like transporter family 16 139 2.6E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XF_0250 50c8e6b77df49b5f82f2fed5900af5d6 304 Pfam PF00892 EamA-like transporter family 148 290 3.4E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 Pfam PF00815 Histidinol dehydrogenase 26 427 4.8E-161 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 Gene3D G3DSA:3.40.50.1980 31 232 4.6E-118 T 14-10-2018 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.6E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 1.6E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.6E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 1.6E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 199 224 1.6E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 169 195 1.6E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.6E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.6E-89 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 426 6.7E-159 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 Gene3D G3DSA:3.40.50.1980 234 349 4.6E-118 T 14-10-2018 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 SUPERFAMILY SSF53720 3 427 2.35E-79 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 427 41.0 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PIRSF PIRSF000099 1 430 2.2E-158 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XF_2219 0dd6973ae47eb75bb0bdf32b250a3a2a 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 668 686 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1077 1093 0.073 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 874 890 0.082 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 645 661 8.7 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1022 1038 0.18 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 663 679 0.0033 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 856 872 0.096 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 911 927 0.073 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 698 715 0.082 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1099 1114 48.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1049 1065 0.15 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 680 697 3.6E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 745 761 0.073 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 717 733 0.17 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF06594 Haemolysin-type calcium binding protein related domain 801 845 2.2E-11 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF06594 Haemolysin-type calcium binding protein related domain 967 1011 2.2E-11 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1133 1171 1.4E-10 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 SUPERFAMILY SSF51120 645 843 1.47E-31 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 SUPERFAMILY SSF51120 854 1011 4.19E-26 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Gene3D G3DSA:2.150.10.10 1015 1070 1.4E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 SUPERFAMILY SSF103647 182 274 1.11E-6 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 PRINTS PR00313 NodO calcium binding signature 892 900 4.2E-10 T 14-10-2018 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 PRINTS PR00313 NodO calcium binding signature 678 689 4.2E-10 T 14-10-2018 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 PRINTS PR00313 NodO calcium binding signature 912 921 4.2E-10 T 14-10-2018 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 PRINTS PR00313 NodO calcium binding signature 874 882 4.2E-10 T 14-10-2018 XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1027 1045 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Gene3D G3DSA:2.150.10.10 707 852 8.5E-30 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Gene3D G3DSA:2.150.10.10 906 1014 9.4E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Gene3D G3DSA:2.150.10.10 645 706 1.3E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Gene3D G3DSA:2.150.10.10 1071 1185 9.8E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 SUPERFAMILY SSF51120 1020 1169 3.27E-26 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 Gene3D G3DSA:2.150.10.10 855 905 5.2E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XF_0668 42eb4fb94d5c1739aa3b9233f663b248 1208 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 861 879 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XF_a0001 2f2a2decd9ebeda03a7e46cae471bbc0 86 SUPERFAMILY SSF47413 17 81 4.02E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_a0001 2f2a2decd9ebeda03a7e46cae471bbc0 86 Pfam PF01381 Helix-turn-helix 28 78 4.3E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_a0001 2f2a2decd9ebeda03a7e46cae471bbc0 86 SMART SM00530 26 81 2.4E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_a0001 2f2a2decd9ebeda03a7e46cae471bbc0 86 Gene3D G3DSA:1.10.260.40 3 85 2.2E-19 T 14-10-2018 XF_2354 d6f24270c6d4debbc7cb5c539399c0ae 185 SUPERFAMILY SSF53271 7 184 4.2E-45 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like XF_2354 d6f24270c6d4debbc7cb5c539399c0ae 185 Pfam PF00156 Phosphoribosyl transferase domain 17 168 7.9E-23 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XF_2354 d6f24270c6d4debbc7cb5c539399c0ae 185 Gene3D G3DSA:3.40.50.2020 3 185 1.4E-45 T 14-10-2018 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 382 401 6.5E-53 T 14-10-2018 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 739 758 6.5E-53 T 14-10-2018 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 631 647 6.5E-53 T 14-10-2018 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 709 728 6.5E-53 T 14-10-2018 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 762 780 6.5E-53 T 14-10-2018 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 378 514 1.2E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 Gene3D G3DSA:3.30.230.10 621 808 1.2E-77 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XF_1189 5aa55315408ddbd08e541b9b534d4209 848 TIGRFAM TIGR00763 lon: endopeptidase La 38 807 1.2E-300 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 PIRSF PIRSF001174 25 810 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 Gene3D G3DSA:1.20.58.1480 147 271 3.4E-42 T 14-10-2018 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 606 808 3.3E-92 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 SUPERFAMILY SSF52540 342 622 2.54E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1189 5aa55315408ddbd08e541b9b534d4209 848 Hamap MF_01973 Lon protease [lon]. 36 808 70.208 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 SUPERFAMILY SSF54211 631 806 2.28E-56 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_1189 5aa55315408ddbd08e541b9b534d4209 848 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 712 720 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 Gene3D G3DSA:1.10.8.60 517 620 2.4E-30 T 14-10-2018 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 Gene3D G3DSA:3.40.50.300 339 516 4.7E-62 T 14-10-2018 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 SUPERFAMILY SSF88697 35 227 6.21E-44 T 14-10-2018 IPR015947 PUA-like superfamily XF_1189 5aa55315408ddbd08e541b9b534d4209 848 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 36 226 2.9E-36 T 14-10-2018 IPR003111 Lon, substrate-binding domain XF_1189 5aa55315408ddbd08e541b9b534d4209 848 SMART SM00382 374 520 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1189 5aa55315408ddbd08e541b9b534d4209 848 Gene3D G3DSA:2.30.130.40 19 140 1.1E-31 T 14-10-2018 XF_1189 5aa55315408ddbd08e541b9b534d4209 848 SMART SM00464 35 228 3.7E-66 T 14-10-2018 IPR003111 Lon, substrate-binding domain XF_0644 31bc2d5374556eff78b88c2d7820cb46 230 Gene3D G3DSA:1.10.287.460 21 86 9.8E-18 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 XF_0644 31bc2d5374556eff78b88c2d7820cb46 230 SUPERFAMILY SSF54534 25 230 2.95E-37 T 14-10-2018 XF_0644 31bc2d5374556eff78b88c2d7820cb46 230 Gene3D G3DSA:3.10.50.40 91 230 8.1E-21 T 14-10-2018 XF_0644 31bc2d5374556eff78b88c2d7820cb46 230 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 15 133 1.4E-25 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 XF_0644 31bc2d5374556eff78b88c2d7820cb46 230 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 180 227 1.1E-6 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XF_1310 732bfd458a02c27c5e3db356e92d3c71 316 Gene3D G3DSA:2.40.10.350 187 262 3.7E-30 T 14-10-2018 XF_1310 732bfd458a02c27c5e3db356e92d3c71 316 Gene3D G3DSA:2.40.10.340 129 272 3.7E-30 T 14-10-2018 XF_1310 732bfd458a02c27c5e3db356e92d3c71 316 PIRSF PIRSF038471 15 280 4.2E-59 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 XF_1310 732bfd458a02c27c5e3db356e92d3c71 316 Pfam PF04085 rod shape-determining protein MreC 133 274 4.4E-33 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 XF_1310 732bfd458a02c27c5e3db356e92d3c71 316 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 18 275 4.8E-52 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 XF_2648 586ba43ac5c55f14ef4b6cb6abc0fba1 432 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 91 114 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XF_2648 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Gene3D G3DSA:3.30.460.30 1 150 2.0E-50 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XF_2648 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 410 29.037 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XF_2648 586ba43ac5c55f14ef4b6cb6abc0fba1 432 SUPERFAMILY SSF69075 309 409 4.18E-24 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XF_2648 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 313 407 1.3E-19 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XF_2648 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Gene3D G3DSA:3.40.50.720 154 305 2.9E-41 T 14-10-2018 XF_2648 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 148 5.1E-46 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XF_2648 586ba43ac5c55f14ef4b6cb6abc0fba1 432 SUPERFAMILY SSF51735 154 307 1.99E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2648 586ba43ac5c55f14ef4b6cb6abc0fba1 432 SUPERFAMILY SSF69742 1 150 1.44E-45 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XF_2648 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 164 297 2.8E-45 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase XF_2648 586ba43ac5c55f14ef4b6cb6abc0fba1 432 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 407 4.1E-121 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XF_2648 586ba43ac5c55f14ef4b6cb6abc0fba1 432 PIRSF PIRSF000445 1 421 2.7E-146 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XF_0274 8b34decd1540de84ff416dee40b20735 427 PIRSF PIRSF036483 12 427 1.9E-218 T 14-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 XF_0274 8b34decd1540de84ff416dee40b20735 427 Gene3D G3DSA:3.40.50.450 16 408 5.6E-139 T 14-10-2018 XF_0274 8b34decd1540de84ff416dee40b20735 427 Gene3D G3DSA:3.40.50.460 149 395 5.6E-139 T 14-10-2018 XF_0274 8b34decd1540de84ff416dee40b20735 427 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 13 408 43.14 T 14-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 XF_0274 8b34decd1540de84ff416dee40b20735 427 SUPERFAMILY SSF53784 15 425 6.28E-101 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XF_0274 8b34decd1540de84ff416dee40b20735 427 Pfam PF00365 Phosphofructokinase 20 331 2.6E-49 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XF_0274 8b34decd1540de84ff416dee40b20735 427 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 244 256 1.4E-11 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XF_0274 8b34decd1540de84ff416dee40b20735 427 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 18 37 1.4E-11 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XF_0274 8b34decd1540de84ff416dee40b20735 427 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 186 202 1.4E-11 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XF_0274 8b34decd1540de84ff416dee40b20735 427 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 144 161 1.4E-11 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XF_0598 24da25d37505e884b2f439a78d921ff9 230 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 180 6.3E-14 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 XF_0598 24da25d37505e884b2f439a78d921ff9 230 Gene3D G3DSA:4.10.860.20 184 230 1.1E-17 T 14-10-2018 XF_0598 24da25d37505e884b2f439a78d921ff9 230 Gene3D G3DSA:2.60.120.620 1 182 3.1E-43 T 14-10-2018 XF_0598 24da25d37505e884b2f439a78d921ff9 230 SMART SM00702 1 181 4.0E-32 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 XF_0598 24da25d37505e884b2f439a78d921ff9 230 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 230 44.618 T 14-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 XF_2601 30090c16fa371e11c60c69af6296159b 107 SUPERFAMILY SSF54862 1 96 1.21E-23 T 14-10-2018 XF_2601 30090c16fa371e11c60c69af6296159b 107 Pfam PF00037 4Fe-4S binding domain 34 56 3.5E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XF_2601 30090c16fa371e11c60c69af6296159b 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XF_2601 30090c16fa371e11c60c69af6296159b 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.4E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 XF_2601 30090c16fa371e11c60c69af6296159b 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.4E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 XF_2601 30090c16fa371e11c60c69af6296159b 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.4E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 XF_2601 30090c16fa371e11c60c69af6296159b 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 8.3E-19 T 14-10-2018 IPR022569 Ferredoxin, C-terminal XF_2601 30090c16fa371e11c60c69af6296159b 107 Gene3D G3DSA:3.30.70.20 2 98 1.4E-30 T 14-10-2018 XF_1234 6dd34274efa71b7e5a6d68dd2d73943f 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 16 255 1.1E-50 T 14-10-2018 XF_1234 6dd34274efa71b7e5a6d68dd2d73943f 298 SUPERFAMILY SSF51621 7 292 4.04E-97 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XF_1234 6dd34274efa71b7e5a6d68dd2d73943f 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 8 296 48.368 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 XF_1234 6dd34274efa71b7e5a6d68dd2d73943f 298 Gene3D G3DSA:3.20.20.60 5 298 2.1E-100 T 14-10-2018 XF_1234 6dd34274efa71b7e5a6d68dd2d73943f 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 11 294 1.8E-124 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 XF_1234 6dd34274efa71b7e5a6d68dd2d73943f 298 ProSitePatterns PS00161 Isocitrate lyase signature. 125 130 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 XF_1485 9fa63bf630a64b004732b1b8289807d5 459 SUPERFAMILY SSF52540 11 457 2.67E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1485 9fa63bf630a64b004732b1b8289807d5 459 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 351 420 2.3E-8 T 14-10-2018 IPR019489 Clp ATPase, C-terminal XF_1485 9fa63bf630a64b004732b1b8289807d5 459 SMART SM01086 351 450 2.8E-27 T 14-10-2018 IPR019489 Clp ATPase, C-terminal XF_1485 9fa63bf630a64b004732b1b8289807d5 459 Gene3D G3DSA:1.10.8.60 351 456 5.8E-40 T 14-10-2018 XF_1485 9fa63bf630a64b004732b1b8289807d5 459 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 61 107 3.6E-6 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XF_1485 9fa63bf630a64b004732b1b8289807d5 459 Pfam PF07724 AAA domain (Cdc48 subfamily) 199 345 3.8E-40 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XF_1485 9fa63bf630a64b004732b1b8289807d5 459 SMART SM00382 57 348 7.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1485 9fa63bf630a64b004732b1b8289807d5 459 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 12 459 9.3E-202 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 XF_1485 9fa63bf630a64b004732b1b8289807d5 459 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 9 459 44.062 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 XF_1604 00ecfaae5eb638f20e132b8e48d5d655 194 PRINTS PR01011 Glutathione peroxidase family signature 52 69 6.9E-15 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XF_1604 00ecfaae5eb638f20e132b8e48d5d655 194 PRINTS PR01011 Glutathione peroxidase family signature 148 157 6.9E-15 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XF_1604 00ecfaae5eb638f20e132b8e48d5d655 194 PRINTS PR01011 Glutathione peroxidase family signature 87 103 6.9E-15 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XF_1604 00ecfaae5eb638f20e132b8e48d5d655 194 PIRSF PIRSF000303 7 190 9.1E-56 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XF_1604 00ecfaae5eb638f20e132b8e48d5d655 194 SUPERFAMILY SSF52833 32 186 2.18E-47 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_1604 00ecfaae5eb638f20e132b8e48d5d655 194 ProSitePatterns PS00460 Glutathione peroxidases active site. 54 69 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 XF_1604 00ecfaae5eb638f20e132b8e48d5d655 194 Pfam PF00255 Glutathione peroxidase 38 140 1.4E-32 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XF_1604 00ecfaae5eb638f20e132b8e48d5d655 194 Gene3D G3DSA:3.40.30.10 26 193 6.8E-51 T 14-10-2018 XF_2739 4f149c3db30ce58d8dcb5e04ec34288b 1058 Pfam PF11867 Domain of unknown function (DUF3387) 712 1051 5.7E-121 T 14-10-2018 IPR021810 Protein of unknown function DUF3387 XF_2739 4f149c3db30ce58d8dcb5e04ec34288b 1058 Gene3D G3DSA:3.90.1570.50 113 274 1.1E-29 T 14-10-2018 XF_2739 4f149c3db30ce58d8dcb5e04ec34288b 1058 SUPERFAMILY SSF52540 239 503 1.08E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2739 4f149c3db30ce58d8dcb5e04ec34288b 1058 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 21 714 5.4E-183 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 XF_2739 4f149c3db30ce58d8dcb5e04ec34288b 1058 Pfam PF04851 Type III restriction enzyme, res subunit 284 460 2.7E-16 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XF_2739 4f149c3db30ce58d8dcb5e04ec34288b 1058 SMART SM00487 282 493 7.5E-11 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_2739 4f149c3db30ce58d8dcb5e04ec34288b 1058 SUPERFAMILY SSF52540 411 697 9.3E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2739 4f149c3db30ce58d8dcb5e04ec34288b 1058 Gene3D G3DSA:3.40.50.300 479 724 7.7E-43 T 14-10-2018 XF_2739 4f149c3db30ce58d8dcb5e04ec34288b 1058 Gene3D G3DSA:3.40.50.300 280 478 2.3E-48 T 14-10-2018 XF_2739 4f149c3db30ce58d8dcb5e04ec34288b 1058 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 18 225 3.5E-47 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 XF_1936 b589757f74a6132e96fb7e18824817b6 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 336 1.1E-153 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XF_1936 b589757f74a6132e96fb7e18824817b6 666 Pfam PF02780 Transketolase, C-terminal domain 554 659 1.4E-13 T 14-10-2018 IPR033248 Transketolase, C-terminal domain XF_1936 b589757f74a6132e96fb7e18824817b6 666 SMART SM00861 357 528 5.0E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XF_1936 b589757f74a6132e96fb7e18824817b6 666 SUPERFAMILY SSF52518 7 321 6.29E-118 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold XF_1936 b589757f74a6132e96fb7e18824817b6 666 Gene3D G3DSA:3.40.50.970 5 328 5.7E-130 T 14-10-2018 XF_1936 b589757f74a6132e96fb7e18824817b6 666 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XF_1936 b589757f74a6132e96fb7e18824817b6 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 665 1.5E-287 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 XF_1936 b589757f74a6132e96fb7e18824817b6 666 Gene3D G3DSA:3.40.50.920 542 666 9.0E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XF_1936 b589757f74a6132e96fb7e18824817b6 666 SUPERFAMILY SSF52518 343 528 9.03E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold XF_1936 b589757f74a6132e96fb7e18824817b6 666 Pfam PF02779 Transketolase, pyrimidine binding domain 357 528 8.9E-45 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XF_1936 b589757f74a6132e96fb7e18824817b6 666 Gene3D G3DSA:3.40.50.970 329 540 1.5E-74 T 14-10-2018 XF_1936 b589757f74a6132e96fb7e18824817b6 666 ProSitePatterns PS00802 Transketolase signature 2. 470 486 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XF_1936 b589757f74a6132e96fb7e18824817b6 666 SUPERFAMILY SSF52922 535 666 3.85E-42 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XF_2417 c9fff63f7bc33a403cb79c7afc1345d4 167 ProSitePatterns PS00855 Signal peptidases II signature. 105 117 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XF_2417 c9fff63f7bc33a403cb79c7afc1345d4 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 138 154 1.1E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XF_2417 c9fff63f7bc33a403cb79c7afc1345d4 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 1.1E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XF_2417 c9fff63f7bc33a403cb79c7afc1345d4 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 1.1E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XF_2417 c9fff63f7bc33a403cb79c7afc1345d4 167 TIGRFAM TIGR00077 lspA: signal peptidase II 10 162 8.4E-41 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XF_2417 c9fff63f7bc33a403cb79c7afc1345d4 167 Pfam PF01252 Signal peptidase (SPase) II 16 157 4.2E-36 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XF_2417 c9fff63f7bc33a403cb79c7afc1345d4 167 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 163 16.258 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XF_1657 2a54277ace5011eed64e4904d8f400cc 203 Pfam PF02661 Fic/DOC family 55 152 1.8E-18 T 14-10-2018 IPR003812 Fido domain XF_1657 2a54277ace5011eed64e4904d8f400cc 203 SUPERFAMILY SSF140931 37 197 2.49E-36 T 14-10-2018 IPR036597 Fido-like domain superfamily XF_1657 2a54277ace5011eed64e4904d8f400cc 203 Gene3D G3DSA:1.10.3290.10 2 202 1.3E-65 T 14-10-2018 IPR036597 Fido-like domain superfamily XF_0550 b42392cca9e8c8a1f3304c37c614f8c4 1041 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 193 7.2E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain XF_0550 b42392cca9e8c8a1f3304c37c614f8c4 1041 Pfam PF00593 TonB dependent receptor 461 1039 5.7E-31 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XF_0550 b42392cca9e8c8a1f3304c37c614f8c4 1041 SUPERFAMILY SSF56935 60 1040 1.74E-65 T 14-10-2018 XF_0550 b42392cca9e8c8a1f3304c37c614f8c4 1041 Gene3D G3DSA:2.170.130.10 53 197 4.8E-25 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XF_0885 657063f7e8f31c524a551f5d531fe445 443 Gene3D G3DSA:3.40.50.2000 269 431 4.2E-18 T 14-10-2018 XF_0885 657063f7e8f31c524a551f5d531fe445 443 SUPERFAMILY SSF53756 88 435 3.92E-31 T 14-10-2018 XF_0885 657063f7e8f31c524a551f5d531fe445 443 Pfam PF13692 Glycosyl transferases group 1 271 405 3.6E-25 T 14-10-2018 XF_0107 a4bc439ad7ae2e8082e1a4183d884adf 86 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 1.9E-33 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0107 a4bc439ad7ae2e8082e1a4183d884adf 86 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.937 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0107 a4bc439ad7ae2e8082e1a4183d884adf 86 Pfam PF00886 Ribosomal protein S16 8 68 3.0E-24 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0107 a4bc439ad7ae2e8082e1a4183d884adf 86 Gene3D G3DSA:3.30.1320.10 1 86 6.6E-31 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0107 a4bc439ad7ae2e8082e1a4183d884adf 86 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_0107 a4bc439ad7ae2e8082e1a4183d884adf 86 SUPERFAMILY SSF54565 1 79 7.85E-30 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1753 d9ec9352b37a673d97a228c91a701f5e 616 Pfam PF07514 Putative helicase 27 340 1.7E-128 T 14-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative XF_1753 d9ec9352b37a673d97a228c91a701f5e 616 Gene3D G3DSA:1.10.3210.40 31 250 3.4E-40 T 14-10-2018 XF_1753 d9ec9352b37a673d97a228c91a701f5e 616 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 489 611 3.7E-48 T 14-10-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal XF_1753 d9ec9352b37a673d97a228c91a701f5e 616 SUPERFAMILY SSF46785 486 612 2.04E-43 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_1753 d9ec9352b37a673d97a228c91a701f5e 616 Gene3D G3DSA:2.40.10.200 506 606 4.2E-26 T 14-10-2018 XF_1753 d9ec9352b37a673d97a228c91a701f5e 616 Gene3D G3DSA:1.10.10.10 490 560 4.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1753 d9ec9352b37a673d97a228c91a701f5e 616 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 26 243 2.9E-88 T 14-10-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class XF_0496 1a7b92919a8b309d63fe059608ef3123 391 Gene3D G3DSA:3.40.390.50 164 266 1.2E-9 T 14-10-2018 XF_0496 1a7b92919a8b309d63fe059608ef3123 391 Pfam PF06114 IrrE N-terminal-like domain 178 305 1.3E-22 T 14-10-2018 IPR010359 IrrE N-terminal-like domain XF_0496 1a7b92919a8b309d63fe059608ef3123 391 SUPERFAMILY SSF55486 135 360 2.34E-6 T 14-10-2018 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:1.10.150.20 435 494 1.5E-15 T 14-10-2018 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:3.30.300.20 282 351 8.0E-25 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta XF_0234 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF50249 135 203 4.18E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_0234 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:1.10.150.20 356 425 2.2E-27 T 14-10-2018 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 Pfam PF13184 NusA-like KH domain 234 301 1.1E-27 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 29.335 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:3.30.1480.10 1 133 3.4E-39 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 2.7E-124 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 SMART SM00322 305 368 0.025 T 14-10-2018 IPR004087 K Homology domain GO:0003676 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 SMART SM00322 234 297 18.0 T 14-10-2018 IPR004087 K Homology domain GO:0003676 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 Pfam PF08529 NusA N-terminal domain 4 128 3.6E-34 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 Pfam PF14520 Helix-hairpin-helix domain 437 492 1.7E-4 T 14-10-2018 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF47794 361 419 2.04E-15 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF47794 434 493 2.35E-7 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:3.30.300.20 203 281 7.5E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta XF_0234 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:2.40.50.140 139 202 1.8E-20 T 14-10-2018 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 5.5E-22 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication XF_0234 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF69705 1 130 1.09E-35 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 Pfam PF00575 S1 RNA binding domain 137 199 4.6E-9 T 14-10-2018 IPR003029 S1 domain GO:0003676 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF54814 205 282 1.63E-29 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF54814 283 346 1.31E-14 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XF_0234 75d14377d20abddb16e08dd9005b6e59 503 SMART SM00316 137 204 1.6E-9 T 14-10-2018 IPR022967 RNA-binding domain, S1 XF_0757 23049aa612ecf10e89c135467af13a27 473 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 407 417 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site XF_0757 23049aa612ecf10e89c135467af13a27 473 SUPERFAMILY SSF64153 3 223 6.8E-54 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 XF_0757 23049aa612ecf10e89c135467af13a27 473 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 291 301 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site XF_0757 23049aa612ecf10e89c135467af13a27 473 Pfam PF03853 YjeF-related protein N-terminus 7 163 1.7E-39 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 XF_0757 23049aa612ecf10e89c135467af13a27 473 Gene3D G3DSA:3.40.1190.20 196 468 8.0E-80 T 14-10-2018 IPR029056 Ribokinase-like XF_0757 23049aa612ecf10e89c135467af13a27 473 PIRSF PIRSF017184 1 469 4.4E-117 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 XF_0757 23049aa612ecf10e89c135467af13a27 473 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 1 186 18.488 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 XF_0757 23049aa612ecf10e89c135467af13a27 473 Gene3D G3DSA:3.40.50.10260 1 192 4.1E-51 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 XF_0757 23049aa612ecf10e89c135467af13a27 473 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 6 186 3.8E-35 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 XF_0757 23049aa612ecf10e89c135467af13a27 473 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 200 468 1.3E-67 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 XF_0757 23049aa612ecf10e89c135467af13a27 473 Pfam PF01256 Carbohydrate kinase 224 459 2.8E-55 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 XF_0757 23049aa612ecf10e89c135467af13a27 473 SUPERFAMILY SSF53613 203 467 9.24E-74 T 14-10-2018 IPR029056 Ribokinase-like XF_0757 23049aa612ecf10e89c135467af13a27 473 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 201 468 22.347 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 Pfam PF01751 Toprim domain 3 138 1.2E-17 T 14-10-2018 IPR006171 TOPRIM domain XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 SMART SM00436 131 226 2.0E-20 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 Gene3D G3DSA:1.10.290.10 290 419 8.7E-151 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 Gene3D G3DSA:2.70.20.10 220 497 8.7E-151 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 Pfam PF01131 DNA topoisomerase 158 601 6.3E-106 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 SMART SM00493 1 131 8.7E-24 T 14-10-2018 IPR006171 TOPRIM domain XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 668 3.0E-202 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 318 333 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 SMART SM00437 281 567 1.1E-66 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 SUPERFAMILY SSF57783 625 670 9.69E-5 T 14-10-2018 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 SUPERFAMILY SSF56712 1 615 1.31E-169 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 Gene3D G3DSA:1.10.460.10 165 611 8.7E-151 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 Gene3D G3DSA:3.40.50.140 1 159 4.4E-53 T 14-10-2018 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 405 421 9.1E-23 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 324 333 9.1E-23 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 530 544 9.1E-23 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 105 118 9.1E-23 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_2059 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 196 214 9.1E-23 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_1862 a56efbd414d0437916dece0c37257dbd 109 SUPERFAMILY SSF50118 3 108 2.78E-24 T 14-10-2018 XF_1862 a56efbd414d0437916dece0c37257dbd 109 Gene3D G3DSA:2.30.30.110 15 109 6.5E-19 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor XF_1862 a56efbd414d0437916dece0c37257dbd 109 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 5 105 6.2E-20 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 XF_2228 787d15ba8d0eee3643ec145e78a09e9d 188 Pfam PF02622 Uncharacterized ACR, COG1678 17 175 4.5E-45 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 XF_2228 787d15ba8d0eee3643ec145e78a09e9d 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 6 188 35.868 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 XF_2228 787d15ba8d0eee3643ec145e78a09e9d 188 Gene3D G3DSA:3.40.1740.10 3 188 9.1E-62 T 14-10-2018 XF_2228 787d15ba8d0eee3643ec145e78a09e9d 188 SUPERFAMILY SSF143456 6 188 3.4E-61 T 14-10-2018 XF_0989 2f49e94f9e083d56d2ecb31577b663fa 87 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 67 2.0E-24 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XF_0989 2f49e94f9e083d56d2ecb31577b663fa 87 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 4 71 4.7E-26 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XF_0989 2f49e94f9e083d56d2ecb31577b663fa 87 Pfam PF01809 Haemolytic domain 4 67 6.9E-27 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XF_0989 2f49e94f9e083d56d2ecb31577b663fa 87 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 68 23.12 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XF_0989 2f49e94f9e083d56d2ecb31577b663fa 87 SMART SM01234 2 67 2.0E-33 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 Pfam PF02559 CarD-like/TRCF domain 525 618 1.5E-24 T 14-10-2018 IPR003711 CarD-like/TRCF domain XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 SUPERFAMILY SSF143517 1047 1191 6.41E-40 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 Gene3D G3DSA:3.40.50.300 587 826 1.8E-231 T 14-10-2018 XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 SUPERFAMILY SSF52540 370 510 7.73E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 SUPERFAMILY SSF52540 568 828 7.53E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 Gene3D G3DSA:3.90.1150.50 1050 1192 4.8E-39 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 SUPERFAMILY SSF52540 827 1035 5.78E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 153 1128 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 Gene3D G3DSA:3.40.50.11180 28 346 2.4E-106 T 14-10-2018 XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 Gene3D G3DSA:3.40.50.11140 369 433 1.7E-7 T 14-10-2018 XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 Pfam PF03461 TRCF domain 1055 1146 1.1E-24 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 Pfam PF00270 DEAD/DEAH box helicase 650 807 9.6E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 Gene3D G3DSA:3.40.50.300 524 1035 1.8E-231 T 14-10-2018 XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 SMART SM01058 524 621 4.2E-48 T 14-10-2018 IPR003711 CarD-like/TRCF domain XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 Gene3D G3DSA:2.30.30.840 528 586 1.8E-231 T 14-10-2018 XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 Gene3D G3DSA:3.30.2060.10 135 220 2.4E-106 T 14-10-2018 XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 SMART SM00490 871 955 5.0E-18 T 14-10-2018 IPR001650 Helicase, C-terminal XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 SUPERFAMILY SSF52540 20 352 1.31E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 SMART SM00982 1054 1154 9.7E-45 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 Pfam PF00271 Helicase conserved C-terminal domain 855 954 5.6E-16 T 14-10-2018 IPR001650 Helicase, C-terminal XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 SUPERFAMILY SSF141259 516 593 2.48E-21 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 27 1158 27.866 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 XF_0045 ab84cc5afc8e00424ed9c37ee6e57072 1193 SMART SM00487 645 835 3.0E-34 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_1845 43b77b03b4e4008b919d3e1efaa0dfe4 161 Pfam PF01131 DNA topoisomerase 2 117 1.4E-17 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XF_1845 43b77b03b4e4008b919d3e1efaa0dfe4 161 Gene3D G3DSA:1.10.290.10 80 140 2.2E-27 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XF_1845 43b77b03b4e4008b919d3e1efaa0dfe4 161 SUPERFAMILY SSF56712 2 117 2.49E-24 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XF_1845 43b77b03b4e4008b919d3e1efaa0dfe4 161 Gene3D G3DSA:2.70.20.10 10 79 2.2E-27 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XF_0847 d28e82a75569685b824ea55c9e000186 841 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 610 663 1.1E-14 T 14-10-2018 XF_0847 d28e82a75569685b824ea55c9e000186 841 PRINTS PR00738 Glycosyl hydrolase family 20 signature 178 198 2.6E-41 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XF_0847 d28e82a75569685b824ea55c9e000186 841 PRINTS PR00738 Glycosyl hydrolase family 20 signature 359 377 2.6E-41 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XF_0847 d28e82a75569685b824ea55c9e000186 841 PRINTS PR00738 Glycosyl hydrolase family 20 signature 543 560 2.6E-41 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XF_0847 d28e82a75569685b824ea55c9e000186 841 PRINTS PR00738 Glycosyl hydrolase family 20 signature 311 328 2.6E-41 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XF_0847 d28e82a75569685b824ea55c9e000186 841 PRINTS PR00738 Glycosyl hydrolase family 20 signature 215 232 2.6E-41 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XF_0847 d28e82a75569685b824ea55c9e000186 841 PRINTS PR00738 Glycosyl hydrolase family 20 signature 381 394 2.6E-41 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XF_0847 d28e82a75569685b824ea55c9e000186 841 PRINTS PR00738 Glycosyl hydrolase family 20 signature 525 541 2.6E-41 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XF_0847 d28e82a75569685b824ea55c9e000186 841 PRINTS PR00738 Glycosyl hydrolase family 20 signature 244 265 2.6E-41 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XF_0847 d28e82a75569685b824ea55c9e000186 841 Gene3D G3DSA:3.30.379.10 89 220 1.5E-156 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 XF_0847 d28e82a75569685b824ea55c9e000186 841 SUPERFAMILY SSF51445 221 574 1.35E-118 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily XF_0847 d28e82a75569685b824ea55c9e000186 841 SUPERFAMILY SSF55545 82 220 3.53E-23 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 XF_0847 d28e82a75569685b824ea55c9e000186 841 Gene3D G3DSA:3.20.20.80 221 583 1.5E-156 T 14-10-2018 XF_0847 d28e82a75569685b824ea55c9e000186 841 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 89 218 8.0E-19 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal XF_0847 d28e82a75569685b824ea55c9e000186 841 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 221 561 9.1E-114 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 XF_1472 183697c5c9802e632fa69160fa96351e 109 Gene3D G3DSA:2.102.10.10 1 109 3.2E-30 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 XF_1472 183697c5c9802e632fa69160fa96351e 109 SUPERFAMILY SSF50022 2 106 6.02E-27 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 XF_1472 183697c5c9802e632fa69160fa96351e 109 Pfam PF00355 Rieske [2Fe-2S] domain 4 94 3.0E-17 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 XF_1072 d30d6e8ef17634ae9c92dec25e743170 596 Gene3D G3DSA:3.90.700.10 250 353 2.3E-167 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1072 d30d6e8ef17634ae9c92dec25e743170 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 596 1.5E-43 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1072 d30d6e8ef17634ae9c92dec25e743170 596 Gene3D G3DSA:4.10.80.40 548 596 1.5E-10 T 14-10-2018 XF_1072 d30d6e8ef17634ae9c92dec25e743170 596 SUPERFAMILY SSF56425 240 358 3.59E-43 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1072 d30d6e8ef17634ae9c92dec25e743170 596 SUPERFAMILY SSF46977 454 596 2.75E-50 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1072 d30d6e8ef17634ae9c92dec25e743170 596 PIRSF PIRSF000171 1 585 5.7E-38 T 14-10-2018 XF_1072 d30d6e8ef17634ae9c92dec25e743170 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 12 596 2.7E-241 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1072 d30d6e8ef17634ae9c92dec25e743170 596 Gene3D G3DSA:3.50.50.60 12 419 2.3E-167 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1072 d30d6e8ef17634ae9c92dec25e743170 596 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 9 596 4.8E-287 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1072 d30d6e8ef17634ae9c92dec25e743170 596 SUPERFAMILY SSF51905 4 440 4.99E-77 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1072 d30d6e8ef17634ae9c92dec25e743170 596 Gene3D G3DSA:1.20.58.100 437 547 3.3E-37 T 14-10-2018 XF_1072 d30d6e8ef17634ae9c92dec25e743170 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 46 55 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1072 d30d6e8ef17634ae9c92dec25e743170 596 Pfam PF00890 FAD binding domain 12 408 9.4E-122 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_0310 0955a3ccb4981e3571d0e39e9719f811 444 SUPERFAMILY SSF142984 255 338 2.62E-21 T 14-10-2018 XF_0310 0955a3ccb4981e3571d0e39e9719f811 444 Gene3D G3DSA:1.20.1440.230 342 441 2.4E-33 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0310 0955a3ccb4981e3571d0e39e9719f811 444 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0310 0955a3ccb4981e3571d0e39e9719f811 444 SUPERFAMILY SSF140490 339 436 1.28E-34 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0310 0955a3ccb4981e3571d0e39e9719f811 444 SUPERFAMILY SSF142019 20 252 8.11E-79 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0310 0955a3ccb4981e3571d0e39e9719f811 444 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 62 233 3.4E-44 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0310 0955a3ccb4981e3571d0e39e9719f811 444 Gene3D G3DSA:3.40.50.11540 67 245 1.4E-73 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0310 0955a3ccb4981e3571d0e39e9719f811 444 Pfam PF10531 SLBB domain 257 305 1.5E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0310 0955a3ccb4981e3571d0e39e9719f811 444 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 429 1.9E-194 T 14-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0310 0955a3ccb4981e3571d0e39e9719f811 444 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 356 367 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0310 0955a3ccb4981e3571d0e39e9719f811 444 SMART SM00928 343 388 3.1E-26 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0310 0955a3ccb4981e3571d0e39e9719f811 444 Gene3D G3DSA:3.10.20.600 247 340 4.5E-27 T 14-10-2018 XF_0310 0955a3ccb4981e3571d0e39e9719f811 444 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 346 426 1.8E-29 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_2278 1128ec66eb4bc3c2551e490de9435e91 253 SUPERFAMILY SSF53448 13 241 1.53E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_2278 1128ec66eb4bc3c2551e490de9435e91 253 Gene3D G3DSA:3.90.550.10 6 245 1.4E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_2278 1128ec66eb4bc3c2551e490de9435e91 253 Pfam PF00535 Glycosyl transferase family 2 20 181 8.1E-23 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XF_0285 a7ad56a40d706206394decf14c65ed33 481 Pfam PF13180 PDZ domain 292 382 8.5E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 XF_0285 a7ad56a40d706206394decf14c65ed33 481 SUPERFAMILY SSF50156 290 386 2.89E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 XF_0285 a7ad56a40d706206394decf14c65ed33 481 SUPERFAMILY SSF50494 62 287 3.07E-62 T 14-10-2018 IPR009003 Peptidase S1, PA clan XF_0285 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 3.5E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XF_0285 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 242 259 3.5E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XF_0285 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 124 136 3.5E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XF_0285 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 185 209 3.5E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XF_0285 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 220 237 3.5E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XF_0285 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 145 165 3.5E-52 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XF_0285 a7ad56a40d706206394decf14c65ed33 481 Gene3D G3DSA:2.40.10.120 62 284 3.8E-79 T 14-10-2018 XF_0285 a7ad56a40d706206394decf14c65ed33 481 Gene3D G3DSA:2.30.42.10 289 390 1.3E-24 T 14-10-2018 XF_0285 a7ad56a40d706206394decf14c65ed33 481 Gene3D G3DSA:2.30.42.10 401 481 1.7E-9 T 14-10-2018 XF_0285 a7ad56a40d706206394decf14c65ed33 481 SMART SM00228 291 373 1.3E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 XF_0285 a7ad56a40d706206394decf14c65ed33 481 SMART SM00228 397 473 0.22 T 14-10-2018 IPR001478 PDZ domain GO:0005515 XF_0285 a7ad56a40d706206394decf14c65ed33 481 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 64 475 4.9E-128 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 XF_0285 a7ad56a40d706206394decf14c65ed33 481 SUPERFAMILY SSF50156 406 475 2.5E-8 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 XF_0285 a7ad56a40d706206394decf14c65ed33 481 Pfam PF13365 Trypsin-like peptidase domain 114 249 1.0E-31 T 14-10-2018 XF_0831 3f9a8ddeedfc2ed607172bcaac906e8a 332 Gene3D G3DSA:3.40.50.1100 50 168 2.9E-112 T 14-10-2018 XF_0831 3f9a8ddeedfc2ed607172bcaac906e8a 332 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 304 4.1E-62 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XF_0831 3f9a8ddeedfc2ed607172bcaac906e8a 332 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 45 63 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 XF_0831 3f9a8ddeedfc2ed607172bcaac906e8a 332 TIGRFAM TIGR01139 cysK: cysteine synthase A 21 316 2.4E-136 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 XF_0831 3f9a8ddeedfc2ed607172bcaac906e8a 332 Gene3D G3DSA:3.40.50.1100 20 313 2.9E-112 T 14-10-2018 XF_0831 3f9a8ddeedfc2ed607172bcaac906e8a 332 TIGRFAM TIGR01136 cysKM: cysteine synthase 21 316 4.3E-127 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 XF_0831 3f9a8ddeedfc2ed607172bcaac906e8a 332 SUPERFAMILY SSF53686 14 318 2.1E-92 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XF_0929 754f9e1bc83fb7e5e8777abbcb7a47ae 583 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 75 236 1.2E-19 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like XF_2689 08ed5aaa57e171b985aa23469ac08b8e 733 SUPERFAMILY SSF52540 408 613 1.6E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2689 08ed5aaa57e171b985aa23469ac08b8e 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 2.6E-171 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 XF_2689 08ed5aaa57e171b985aa23469ac08b8e 733 Gene3D G3DSA:1.10.8.630 4 114 2.7E-29 T 14-10-2018 XF_2689 08ed5aaa57e171b985aa23469ac08b8e 733 SMART SM00487 196 392 1.1E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_2689 08ed5aaa57e171b985aa23469ac08b8e 733 Gene3D G3DSA:3.40.50.300 189 379 1.6E-71 T 14-10-2018 XF_2689 08ed5aaa57e171b985aa23469ac08b8e 733 Pfam PF00271 Helicase conserved C-terminal domain 507 593 1.6E-5 T 14-10-2018 IPR001650 Helicase, C-terminal XF_2689 08ed5aaa57e171b985aa23469ac08b8e 733 Pfam PF00270 DEAD/DEAH box helicase 204 362 1.7E-12 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XF_2689 08ed5aaa57e171b985aa23469ac08b8e 733 SMART SM00490 497 593 2.4E-9 T 14-10-2018 IPR001650 Helicase, C-terminal XF_2689 08ed5aaa57e171b985aa23469ac08b8e 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 23.112 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 XF_2689 08ed5aaa57e171b985aa23469ac08b8e 733 SUPERFAMILY SSF52540 184 380 3.91E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0740 ff70ff89d24723f68dffd1ef7bc883c1 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.4E-48 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0740 ff70ff89d24723f68dffd1ef7bc883c1 119 Gene3D G3DSA:1.10.720.90 2 55 2.9E-21 T 14-10-2018 XF_0740 ff70ff89d24723f68dffd1ef7bc883c1 119 Pfam PF00453 Ribosomal protein L20 3 109 3.1E-48 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0740 ff70ff89d24723f68dffd1ef7bc883c1 119 SUPERFAMILY SSF74731 3 117 3.56E-49 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0740 ff70ff89d24723f68dffd1ef7bc883c1 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.372 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0740 ff70ff89d24723f68dffd1ef7bc883c1 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.1E-38 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0740 ff70ff89d24723f68dffd1ef7bc883c1 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.1E-38 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0740 ff70ff89d24723f68dffd1ef7bc883c1 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.1E-38 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0740 ff70ff89d24723f68dffd1ef7bc883c1 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0740 ff70ff89d24723f68dffd1ef7bc883c1 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 2.0E-21 T 14-10-2018 XF_0740 ff70ff89d24723f68dffd1ef7bc883c1 119 Gene3D G3DSA:1.10.1900.20 56 118 9.8E-28 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1002 d66d2e08ea9d56f84669f4538c87fe29 333 Gene3D G3DSA:3.30.360.10 134 290 2.1E-86 T 14-10-2018 XF_1002 d66d2e08ea9d56f84669f4538c87fe29 333 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 124 7.8E-28 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XF_1002 d66d2e08ea9d56f84669f4538c87fe29 333 Gene3D G3DSA:3.40.50.720 8 308 2.1E-86 T 14-10-2018 XF_1002 d66d2e08ea9d56f84669f4538c87fe29 333 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 6 316 31.926 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XF_1002 d66d2e08ea9d56f84669f4538c87fe29 333 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 131 147 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XF_1002 d66d2e08ea9d56f84669f4538c87fe29 333 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 7 321 9.8E-97 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XF_1002 d66d2e08ea9d56f84669f4538c87fe29 333 SMART SM00859 7 128 1.5E-29 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XF_1002 d66d2e08ea9d56f84669f4538c87fe29 333 SUPERFAMILY SSF55347 136 290 8.72E-33 T 14-10-2018 XF_1002 d66d2e08ea9d56f84669f4538c87fe29 333 SUPERFAMILY SSF51735 6 151 1.03E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2277 805ec1d70ed2d3c943de5d9d73077539 109 PIRSF PIRSF028440 5 109 1.4E-40 T 14-10-2018 IPR014546 Uncharacterised conserved protein, lipid A biosynthesis XF_2277 805ec1d70ed2d3c943de5d9d73077539 109 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 28 99 8.4E-21 T 14-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XF_2277 805ec1d70ed2d3c943de5d9d73077539 109 SMART SM01259 28 101 8.6E-23 T 14-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XF_2277 805ec1d70ed2d3c943de5d9d73077539 109 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 23 106 1.0E-42 T 14-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XF_a0041 ced63ef9083b04b3c1dd044272e4bd0a 158 Pfam PF07283 Conjugal transfer protein TrbH 33 158 4.9E-53 T 14-10-2018 IPR010837 Conjugal transfer, TrbH XF_2742 c4295bad2d754d1b32a7b46703ab8af1 519 Pfam PF02384 N-6 DNA Methylase 157 478 3.4E-113 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 XF_2742 c4295bad2d754d1b32a7b46703ab8af1 519 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 281 287 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XF_2742 c4295bad2d754d1b32a7b46703ab8af1 519 Pfam PF12161 HsdM N-terminal domain 19 135 9.2E-25 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain XF_2742 c4295bad2d754d1b32a7b46703ab8af1 519 Gene3D G3DSA:3.40.50.150 158 462 4.4E-118 T 14-10-2018 XF_2742 c4295bad2d754d1b32a7b46703ab8af1 519 SUPERFAMILY SSF53335 19 518 5.68E-139 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_2742 c4295bad2d754d1b32a7b46703ab8af1 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 181 197 3.0E-20 T 14-10-2018 XF_2742 c4295bad2d754d1b32a7b46703ab8af1 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 278 290 3.0E-20 T 14-10-2018 XF_2742 c4295bad2d754d1b32a7b46703ab8af1 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 204 218 3.0E-20 T 14-10-2018 XF_2742 c4295bad2d754d1b32a7b46703ab8af1 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 312 336 3.0E-20 T 14-10-2018 XF_2742 c4295bad2d754d1b32a7b46703ab8af1 519 Gene3D G3DSA:1.20.1260.30 15 148 2.4E-43 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily XF_1855 ae57399308e4433345c426a8d110c684 551 SUPERFAMILY SSF117457 363 532 7.98E-62 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 XF_1855 ae57399308e4433345c426a8d110c684 551 Pfam PF05683 Fumarase C-terminus 335 534 1.8E-78 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 XF_1855 ae57399308e4433345c426a8d110c684 551 PIRSF PIRSF001394 39 551 2.8E-221 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 XF_1855 ae57399308e4433345c426a8d110c684 551 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 58 331 3.1E-60 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 XF_1855 ae57399308e4433345c426a8d110c684 551 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 371 532 1.1E-48 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 XF_1855 ae57399308e4433345c426a8d110c684 551 Pfam PF05681 Fumarate hydratase (Fumerase) 57 331 2.7E-97 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 XF_1855 ae57399308e4433345c426a8d110c684 551 Gene3D G3DSA:3.20.130.10 353 533 6.8E-60 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 XF_0560 dadfb647880215a00ffcede7c322fee4 240 SUPERFAMILY SSF52317 28 204 3.15E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_0560 dadfb647880215a00ffcede7c322fee4 240 Gene3D G3DSA:3.40.50.880 17 240 1.3E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_0560 dadfb647880215a00ffcede7c322fee4 240 Pfam PF00117 Glutamine amidotransferase class-I 40 193 1.2E-19 T 14-10-2018 IPR017926 Glutamine amidotransferase XF_0433 2dd7a76d61bf6eeb139bae8ef8027bcf 148 SUPERFAMILY SSF89095 1 147 4.03E-43 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 XF_0433 2dd7a76d61bf6eeb139bae8ef8027bcf 148 Gene3D G3DSA:1.10.10.410 91 147 5.4E-19 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal XF_0433 2dd7a76d61bf6eeb139bae8ef8027bcf 148 Gene3D G3DSA:1.10.1510.10 1 90 5.5E-30 T 14-10-2018 XF_0433 2dd7a76d61bf6eeb139bae8ef8027bcf 148 Pfam PF09424 Yqey-like protein 4 146 1.7E-55 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 XF_1153 8b22349327f6629b7a570011e02bfc06 202 SUPERFAMILY SSF52166 10 201 9.29E-57 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 XF_1153 8b22349327f6629b7a570011e02bfc06 202 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 14 199 7.6E-60 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1153 8b22349327f6629b7a570011e02bfc06 202 Pfam PF00573 Ribosomal protein L4/L1 family 13 199 9.5E-52 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 XF_1153 8b22349327f6629b7a570011e02bfc06 202 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 202 27.319 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1153 8b22349327f6629b7a570011e02bfc06 202 Gene3D G3DSA:3.40.1370.10 7 202 2.1E-53 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 XF_2563 98722d3bd4df6d088b2cdf39f72550f4 466 SUPERFAMILY SSF55681 98 464 9.74E-95 T 14-10-2018 XF_2563 98722d3bd4df6d088b2cdf39f72550f4 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 7.4E-194 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 XF_2563 98722d3bd4df6d088b2cdf39f72550f4 466 Gene3D G3DSA:3.30.930.10 108 464 2.0E-107 T 14-10-2018 XF_2563 98722d3bd4df6d088b2cdf39f72550f4 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 5.7E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2563 98722d3bd4df6d088b2cdf39f72550f4 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 5.7E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2563 98722d3bd4df6d088b2cdf39f72550f4 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 5.7E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2563 98722d3bd4df6d088b2cdf39f72550f4 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 5.7E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2563 98722d3bd4df6d088b2cdf39f72550f4 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 459 3.7E-82 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2563 98722d3bd4df6d088b2cdf39f72550f4 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.287 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 XF_2563 98722d3bd4df6d088b2cdf39f72550f4 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 4.8E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XF_2563 98722d3bd4df6d088b2cdf39f72550f4 466 Gene3D G3DSA:2.40.50.140 2 105 2.1E-18 T 14-10-2018 XF_2563 98722d3bd4df6d088b2cdf39f72550f4 466 SUPERFAMILY SSF50249 15 102 2.57E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2234 60f23dfbb8d8ab233317da2c2287740b 160 Gene3D G3DSA:2.60.40.790 11 147 1.1E-37 T 14-10-2018 IPR008978 HSP20-like chaperone XF_2234 60f23dfbb8d8ab233317da2c2287740b 160 SUPERFAMILY SSF49764 24 147 9.77E-38 T 14-10-2018 IPR008978 HSP20-like chaperone XF_2234 60f23dfbb8d8ab233317da2c2287740b 160 Pfam PF00011 Hsp20/alpha crystallin family 48 147 3.4E-24 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain XF_2671 a98e872be7cc46bf2730cd4f74d2df6e 393 Gene3D G3DSA:3.30.1490.20 103 180 2.9E-26 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XF_2671 a98e872be7cc46bf2730cd4f74d2df6e 393 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 351 39.708 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 XF_2671 a98e872be7cc46bf2730cd4f74d2df6e 393 SUPERFAMILY SSF52440 3 95 1.18E-19 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XF_2671 a98e872be7cc46bf2730cd4f74d2df6e 393 SUPERFAMILY SSF51246 304 368 2.35E-15 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 XF_2671 a98e872be7cc46bf2730cd4f74d2df6e 393 Gene3D G3DSA:3.30.470.20 181 372 2.6E-66 T 14-10-2018 XF_2671 a98e872be7cc46bf2730cd4f74d2df6e 393 Pfam PF02222 ATP-grasp domain 107 279 3.8E-53 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type XF_2671 a98e872be7cc46bf2730cd4f74d2df6e 393 Gene3D G3DSA:3.40.50.20 1 102 3.1E-31 T 14-10-2018 XF_2671 a98e872be7cc46bf2730cd4f74d2df6e 393 SUPERFAMILY SSF56059 98 299 3.71E-59 T 14-10-2018 XF_2671 a98e872be7cc46bf2730cd4f74d2df6e 393 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 354 5.3E-109 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 XF_2189 6446bce6da596ca7abec02555b899bab 109 Pfam PF13930 DNA/RNA non-specific endonuclease 2 98 1.1E-20 T 14-10-2018 XF_1344 526c88d4f5613203962db44adc421fdc 339 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 25 335 5.5E-142 T 14-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 XF_1344 526c88d4f5613203962db44adc421fdc 339 Gene3D G3DSA:3.40.190.10 122 334 1.5E-128 T 14-10-2018 XF_1344 526c88d4f5613203962db44adc421fdc 339 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 153 161 - T 14-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 XF_1344 526c88d4f5613203962db44adc421fdc 339 Gene3D G3DSA:3.40.190.10 34 304 1.5E-128 T 14-10-2018 XF_1344 526c88d4f5613203962db44adc421fdc 339 Pfam PF13531 Bacterial extracellular solute-binding protein 46 288 4.1E-41 T 14-10-2018 XF_1344 526c88d4f5613203962db44adc421fdc 339 SUPERFAMILY SSF53850 28 335 1.23E-84 T 14-10-2018 XF_0093 d9aa6637effc722268baa3d65517e440 645 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 332 5.9E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XF_0093 d9aa6637effc722268baa3d65517e440 645 SUPERFAMILY SSF140990 416 614 1.44E-75 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 XF_0093 d9aa6637effc722268baa3d65517e440 645 ProSitePatterns PS00674 AAA-protein family signature. 304 322 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 XF_0093 d9aa6637effc722268baa3d65517e440 645 SMART SM00382 197 336 6.4E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_0093 d9aa6637effc722268baa3d65517e440 645 Gene3D G3DSA:2.40.50.920 36 109 2.1E-5 T 14-10-2018 XF_0093 d9aa6637effc722268baa3d65517e440 645 Gene3D G3DSA:3.40.50.300 155 333 8.3E-70 T 14-10-2018 XF_0093 d9aa6637effc722268baa3d65517e440 645 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 8 633 37.232 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 XF_0093 d9aa6637effc722268baa3d65517e440 645 SUPERFAMILY SSF52540 160 404 2.54E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0093 d9aa6637effc722268baa3d65517e440 645 Gene3D G3DSA:1.20.58.760 415 612 7.8E-74 T 14-10-2018 XF_0093 d9aa6637effc722268baa3d65517e440 645 Pfam PF01434 Peptidase family M41 395 605 8.2E-83 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 XF_0093 d9aa6637effc722268baa3d65517e440 645 Pfam PF06480 FtsH Extracellular 11 101 1.6E-8 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 XF_0093 d9aa6637effc722268baa3d65517e440 645 Gene3D G3DSA:1.10.8.60 335 412 3.8E-28 T 14-10-2018 XF_0093 d9aa6637effc722268baa3d65517e440 645 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 114 606 1.3E-241 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 XF_2639 d3ad9ed508c8e3a8e8c5792967173c74 135 Gene3D G3DSA:1.20.5.1030 76 132 8.4E-16 T 14-10-2018 IPR038379 SecE superfamily XF_2639 d3ad9ed508c8e3a8e8c5792967173c74 135 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 81 109 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XF_2639 d3ad9ed508c8e3a8e8c5792967173c74 135 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 81 132 4.6E-17 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XF_2639 d3ad9ed508c8e3a8e8c5792967173c74 135 PRINTS PR01650 Bacterial translocase SecE signature 54 75 2.0E-13 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XF_2639 d3ad9ed508c8e3a8e8c5792967173c74 135 PRINTS PR01650 Bacterial translocase SecE signature 75 95 2.0E-13 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XF_2639 d3ad9ed508c8e3a8e8c5792967173c74 135 PRINTS PR01650 Bacterial translocase SecE signature 99 119 2.0E-13 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XF_2639 d3ad9ed508c8e3a8e8c5792967173c74 135 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 79 133 6.8E-19 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XF_2639 d3ad9ed508c8e3a8e8c5792967173c74 135 Hamap MF_00422 Protein translocase subunit SecE [secE]. 76 131 11.866 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XF_0821 cb886c97dd23d81111b5d96602d7ccbf 169 Gene3D G3DSA:1.10.10.10 14 102 4.5E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_0821 cb886c97dd23d81111b5d96602d7ccbf 169 Gene3D G3DSA:3.30.1490.190 105 163 2.1E-14 T 14-10-2018 XF_0821 cb886c97dd23d81111b5d96602d7ccbf 169 Pfam PF01475 Ferric uptake regulator family 30 152 7.8E-11 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 XF_0821 cb886c97dd23d81111b5d96602d7ccbf 169 SUPERFAMILY SSF46785 25 157 7.44E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_2394 d70633f33ee2b137bf416385a1b4f6f1 279 Gene3D G3DSA:3.40.250.10 171 275 3.5E-16 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily XF_2394 d70633f33ee2b137bf416385a1b4f6f1 279 SUPERFAMILY SSF52833 2 75 1.79E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_2394 d70633f33ee2b137bf416385a1b4f6f1 279 Gene3D G3DSA:3.40.30.10 1 75 4.6E-24 T 14-10-2018 XF_2394 d70633f33ee2b137bf416385a1b4f6f1 279 SUPERFAMILY SSF52821 173 274 9.33E-19 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily XF_2394 d70633f33ee2b137bf416385a1b4f6f1 279 Pfam PF00581 Rhodanese-like domain 181 269 2.8E-7 T 14-10-2018 IPR001763 Rhodanese-like domain XF_2394 d70633f33ee2b137bf416385a1b4f6f1 279 Pfam PF00462 Glutaredoxin 2 55 7.5E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 XF_2394 d70633f33ee2b137bf416385a1b4f6f1 279 SUPERFAMILY SSF89360 85 172 1.28E-11 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XF_2394 d70633f33ee2b137bf416385a1b4f6f1 279 Gene3D G3DSA:2.60.300.12 86 170 1.7E-6 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XF_2394 d70633f33ee2b137bf416385a1b4f6f1 279 SMART SM00450 179 274 2.5E-11 T 14-10-2018 IPR001763 Rhodanese-like domain XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 56 180 4.1E-34 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 Gene3D G3DSA:3.40.120.10 52 198 3.0E-53 T 14-10-2018 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 Gene3D G3DSA:3.30.310.50 418 500 3.3E-27 T 14-10-2018 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 Gene3D G3DSA:3.40.120.10 299 417 3.7E-34 T 14-10-2018 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 307 417 2.7E-22 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 SUPERFAMILY SSF53738 47 226 9.71E-36 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 Gene3D G3DSA:3.40.120.10 221 298 9.1E-30 T 14-10-2018 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 143 152 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 SUPERFAMILY SSF53738 202 305 4.71E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 SUPERFAMILY SSF53738 307 411 2.28E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 SUPERFAMILY SSF55957 417 500 1.2E-18 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 422 498 1.2E-11 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 219 238 4.1E-28 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 253 266 4.1E-28 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 282 297 4.1E-28 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 142 156 4.1E-28 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_0260 02a401206575acf9ddf6f8dd37a9360c 500 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 203 302 8.5E-23 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XF_1728 09f12368940db4709e9fd52451e7f010 447 Gene3D G3DSA:1.20.1250.20 66 439 1.4E-38 T 14-10-2018 XF_1728 09f12368940db4709e9fd52451e7f010 447 SUPERFAMILY SSF103473 67 439 2.62E-43 T 14-10-2018 IPR036259 MFS transporter superfamily XF_1728 09f12368940db4709e9fd52451e7f010 447 Pfam PF07690 Major Facilitator Superfamily 73 402 2.9E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XF_0437 610f77a2bf2e4e44feeb1d7a6701ac20 472 SUPERFAMILY SSF50182 231 298 1.18E-10 T 14-10-2018 IPR010920 LSM domain superfamily XF_0437 610f77a2bf2e4e44feeb1d7a6701ac20 472 Pfam PF00924 Mechanosensitive ion channel 191 443 5.0E-41 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 XF_0486 224623fc244af28cb581cee82f8cd033 203 Gene3D G3DSA:2.160.10.10 33 98 7.6E-12 T 14-10-2018 XF_0486 224623fc244af28cb581cee82f8cd033 203 SUPERFAMILY SSF51161 23 195 6.99E-27 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily XF_0486 224623fc244af28cb581cee82f8cd033 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 70 103 2.3E-7 T 14-10-2018 IPR001451 Hexapeptide repeat XF_0486 224623fc244af28cb581cee82f8cd033 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 164 2.5E-6 T 14-10-2018 IPR001451 Hexapeptide repeat XF_0486 224623fc244af28cb581cee82f8cd033 203 Gene3D G3DSA:2.160.10.10 99 194 3.9E-14 T 14-10-2018 XF_2211 777a5f4fe18764e05b651dbb996fc86d 232 Gene3D G3DSA:3.40.50.1000 6 213 3.2E-70 T 14-10-2018 IPR023214 HAD superfamily XF_2211 777a5f4fe18764e05b651dbb996fc86d 232 SUPERFAMILY SSF56784 1 230 3.31E-57 T 14-10-2018 IPR036412 HAD-like superfamily XF_2211 777a5f4fe18764e05b651dbb996fc86d 232 Gene3D G3DSA:1.10.720.60 18 99 3.2E-70 T 14-10-2018 XF_2211 777a5f4fe18764e05b651dbb996fc86d 232 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 3 227 40.6 T 14-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 XF_2211 777a5f4fe18764e05b651dbb996fc86d 232 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 6 213 3.1E-76 T 14-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 XF_2211 777a5f4fe18764e05b651dbb996fc86d 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 117 197 1.3E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XF_2593 87dbe9f0075632e37f4f0d551080f88d 266 Gene3D G3DSA:3.40.50.2300 28 164 1.4E-37 T 14-10-2018 XF_2593 87dbe9f0075632e37f4f0d551080f88d 266 Gene3D G3DSA:1.10.10.10 165 262 4.0E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_2593 87dbe9f0075632e37f4f0d551080f88d 266 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 37 261 6.6E-107 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 XF_2593 87dbe9f0075632e37f4f0d551080f88d 266 SMART SM00448 38 151 2.1E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2593 87dbe9f0075632e37f4f0d551080f88d 266 Pfam PF00072 Response regulator receiver domain 40 152 5.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2593 87dbe9f0075632e37f4f0d551080f88d 266 SUPERFAMILY SSF52172 37 159 1.71E-41 T 14-10-2018 IPR011006 CheY-like superfamily XF_2593 87dbe9f0075632e37f4f0d551080f88d 266 SUPERFAMILY SSF46894 162 260 4.25E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XF_2593 87dbe9f0075632e37f4f0d551080f88d 266 SMART SM00862 185 260 2.4E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XF_2593 87dbe9f0075632e37f4f0d551080f88d 266 Pfam PF00486 Transcriptional regulatory protein, C terminal 188 260 5.8E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XF_1127 98c6df7195ebdfde742f0435703fd6e6 485 PIRSF PIRSF004919 19 484 3.2E-137 T 14-10-2018 IPR025502 TldD XF_1127 98c6df7195ebdfde742f0435703fd6e6 485 SUPERFAMILY SSF111283 23 483 1.83E-131 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 XF_1127 98c6df7195ebdfde742f0435703fd6e6 485 Gene3D G3DSA:3.30.2290.10 15 243 1.2E-23 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal XF_1127 98c6df7195ebdfde742f0435703fd6e6 485 Pfam PF01523 Putative modulator of DNA gyrase 40 335 7.9E-74 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 XF_1925 e920b67eb2ee50663150e1b04e61afd4 289 Gene3D G3DSA:3.20.20.70 129 271 2.2E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_1925 e920b67eb2ee50663150e1b04e61afd4 289 PIRSF PIRSF006250 8 284 7.2E-94 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 XF_1925 e920b67eb2ee50663150e1b04e61afd4 289 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 15 281 5.2E-96 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 XF_1925 e920b67eb2ee50663150e1b04e61afd4 289 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 26 113 1.3E-26 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 XF_1925 e920b67eb2ee50663150e1b04e61afd4 289 Gene3D G3DSA:3.90.1170.20 18 279 2.2E-100 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 XF_1925 e920b67eb2ee50663150e1b04e61afd4 289 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 115 280 8.0E-59 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 XF_1925 e920b67eb2ee50663150e1b04e61afd4 289 SUPERFAMILY SSF51690 115 281 2.63E-58 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XF_1925 e920b67eb2ee50663150e1b04e61afd4 289 SUPERFAMILY SSF54675 2 114 1.57E-31 T 14-10-2018 XF_0230 aac984724ff8553b945976c0d0894e43 281 Gene3D G3DSA:3.30.1300.10 180 281 6.1E-27 T 14-10-2018 XF_0230 aac984724ff8553b945976c0d0894e43 281 Gene3D G3DSA:3.40.50.620 1 179 1.2E-68 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0230 aac984724ff8553b945976c0d0894e43 281 SUPERFAMILY SSF52374 3 280 6.66E-98 T 14-10-2018 XF_0230 aac984724ff8553b945976c0d0894e43 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 4 279 4.3E-86 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 XF_0230 aac984724ff8553b945976c0d0894e43 281 Pfam PF02569 Pantoate-beta-alanine ligase 5 279 2.0E-93 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 XF_0230 aac984724ff8553b945976c0d0894e43 281 Hamap MF_00158 Pantothenate synthetase [panC]. 3 281 37.628 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 XF_0003 863dd12bdde465029251562484acf40d 364 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 364 79.606 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 XF_0003 863dd12bdde465029251562484acf40d 364 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 336 4.5E-17 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal XF_0003 863dd12bdde465029251562484acf40d 364 ProSitePatterns PS00618 RecF protein signature 2. 303 321 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 XF_0003 863dd12bdde465029251562484acf40d 364 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 338 1.7E-76 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 XF_0003 863dd12bdde465029251562484acf40d 364 Gene3D G3DSA:1.20.1050.90 123 302 3.4E-73 T 14-10-2018 XF_0003 863dd12bdde465029251562484acf40d 364 Gene3D G3DSA:3.40.50.300 7 338 3.4E-73 T 14-10-2018 XF_0003 863dd12bdde465029251562484acf40d 364 ProSitePatterns PS00617 RecF protein signature 1. 120 140 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 XF_0003 863dd12bdde465029251562484acf40d 364 SUPERFAMILY SSF52540 1 335 2.55E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2081 a175fe04d750387547f4f3b2b216bc4c 86 Gene3D G3DSA:1.10.1220.10 5 78 1.1E-14 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XF_2081 a175fe04d750387547f4f3b2b216bc4c 86 Pfam PF04221 RelB antitoxin 4 83 9.2E-30 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ XF_2081 a175fe04d750387547f4f3b2b216bc4c 86 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 68 2.3E-20 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ XF_2081 a175fe04d750387547f4f3b2b216bc4c 86 PIRSF PIRSF003108 1 86 7.1E-29 T 14-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 XF_1375 4cfdc5419a12b859a34073eb72f4e4c9 449 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 56 445 50.149 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XF_1375 4cfdc5419a12b859a34073eb72f4e4c9 449 SUPERFAMILY SSF53686 57 442 3.4E-141 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XF_1375 4cfdc5419a12b859a34073eb72f4e4c9 449 PIRSF PIRSF001413 43 449 7.8E-155 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XF_1375 4cfdc5419a12b859a34073eb72f4e4c9 449 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 61 443 2.2E-182 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XF_1375 4cfdc5419a12b859a34073eb72f4e4c9 449 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 135 149 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XF_1375 4cfdc5419a12b859a34073eb72f4e4c9 449 Gene3D G3DSA:3.40.50.1100 64 260 2.3E-177 T 14-10-2018 XF_1375 4cfdc5419a12b859a34073eb72f4e4c9 449 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 107 432 1.6E-46 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XF_1375 4cfdc5419a12b859a34073eb72f4e4c9 449 Gene3D G3DSA:3.40.50.1100 108 438 2.3E-177 T 14-10-2018 XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:2.40.50.140 635 727 1.9E-27 T 14-10-2018 XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF50249 642 730 1.34E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:1.10.150.310 503 634 4.5E-50 T 14-10-2018 XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 SMART SM00732 329 428 4.0E-37 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 Pfam PF09371 Tex-like protein N-terminal domain 14 196 1.0E-64 T 14-10-2018 IPR018974 Tex-like protein, N-terminal XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF158832 5 324 5.75E-112 T 14-10-2018 XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF47781 565 636 4.89E-20 T 14-10-2018 IPR010994 RuvA domain 2-like XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF53098 325 473 5.54E-51 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 SMART SM00316 653 724 2.3E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:3.30.420.140 328 455 2.2E-150 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 Pfam PF12836 Helix-hairpin-helix motif 495 559 7.7E-27 T 14-10-2018 XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:1.10.3500.10 117 500 2.2E-150 T 14-10-2018 IPR023323 Tex-like domain superfamily XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:1.10.10.650 3 114 9.2E-38 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF47781 474 561 8.45E-26 T 14-10-2018 IPR010994 RuvA domain 2-like XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 Pfam PF16921 Tex protein YqgF-like domain 330 455 2.3E-54 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain XF_2165 cf642a99e7065fb2b29ca3094d1dc5a9 772 Pfam PF00575 S1 RNA binding domain 653 724 5.9E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 XF_1810 28a4963b443f7a6ac230c6692e12ead2 114 Pfam PF01230 HIT domain 12 108 5.5E-23 T 14-10-2018 IPR001310 Histidine triad (HIT) protein XF_1810 28a4963b443f7a6ac230c6692e12ead2 114 PRINTS PR00332 Histidine triad family signature 27 45 5.4E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein XF_1810 28a4963b443f7a6ac230c6692e12ead2 114 PRINTS PR00332 Histidine triad family signature 96 106 5.4E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein XF_1810 28a4963b443f7a6ac230c6692e12ead2 114 PRINTS PR00332 Histidine triad family signature 6 22 5.4E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein XF_1810 28a4963b443f7a6ac230c6692e12ead2 114 SUPERFAMILY SSF54197 1 112 6.5E-33 T 14-10-2018 IPR036265 HIT-like superfamily XF_1810 28a4963b443f7a6ac230c6692e12ead2 114 Gene3D G3DSA:3.30.428.10 1 111 1.5E-31 T 14-10-2018 IPR036265 HIT-like superfamily XF_1810 28a4963b443f7a6ac230c6692e12ead2 114 ProSitePatterns PS00892 HIT domain signature. 89 107 - T 14-10-2018 IPR019808 Histidine triad, conserved site XF_1668 a8acbe90e30d49b49627906d1be8f377 120 SUPERFAMILY SSF47598 79 118 2.31E-8 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XF_1668 a8acbe90e30d49b49627906d1be8f377 120 SUPERFAMILY SSF143100 8 84 9.94E-5 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like XF_1668 a8acbe90e30d49b49627906d1be8f377 120 Pfam PF05534 HicB family 64 114 7.3E-24 T 14-10-2018 IPR008651 Uncharacterised protein family HicB XF_1668 a8acbe90e30d49b49627906d1be8f377 120 Gene3D G3DSA:1.20.5.780 79 119 1.1E-5 T 14-10-2018 XF_0568 e964528bb6d089a51eee971ba527a487 302 Pfam PF04381 Putative exonuclease, RdgC 1 289 3.8E-95 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 XF_0568 e964528bb6d089a51eee971ba527a487 302 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 300 41.613 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 XF_2074 bd13ed91c01a0406239b36c530b807ae 98 Gene3D G3DSA:3.30.2310.20 2 94 5.2E-12 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XF_2074 bd13ed91c01a0406239b36c530b807ae 98 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 94 1.4E-16 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XF_2151 1b5da75030be4d86ad643790390fdb20 424 SUPERFAMILY SSF53474 89 384 1.92E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_2151 1b5da75030be4d86ad643790390fdb20 424 PIRSF PIRSF029171 6 424 6.0E-73 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XF_2151 1b5da75030be4d86ad643790390fdb20 424 Gene3D G3DSA:3.40.50.1820 341 424 1.3E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_2151 1b5da75030be4d86ad643790390fdb20 424 Gene3D G3DSA:3.40.50.1820 35 259 1.3E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_2151 1b5da75030be4d86ad643790390fdb20 424 Pfam PF03583 Secretory lipase 134 212 1.9E-6 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XF_0150 c823135c5f7ab9fcdf06749de55ac186 155 TIGRFAM TIGR00576 dut: dUTP diphosphatase 16 153 3.3E-44 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 XF_0150 c823135c5f7ab9fcdf06749de55ac186 155 Gene3D G3DSA:2.70.40.10 2 153 1.0E-45 T 14-10-2018 IPR036157 dUTPase-like superfamily XF_0150 c823135c5f7ab9fcdf06749de55ac186 155 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 10 154 31.457 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 XF_0150 c823135c5f7ab9fcdf06749de55ac186 155 Pfam PF00692 dUTPase 23 153 9.9E-34 T 14-10-2018 IPR029054 dUTPase-like XF_0150 c823135c5f7ab9fcdf06749de55ac186 155 SUPERFAMILY SSF51283 9 154 9.42E-49 T 14-10-2018 IPR036157 dUTPase-like superfamily XF_1951 1a73cb33773d4b8fb1299b768bb341f5 389 Pfam PF01339 CheB methylesterase 215 355 1.9E-10 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 XF_1951 1a73cb33773d4b8fb1299b768bb341f5 389 Gene3D G3DSA:3.40.50.180 212 353 3.3E-10 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal XF_1951 1a73cb33773d4b8fb1299b768bb341f5 389 SUPERFAMILY SSF52738 210 365 6.41E-21 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal XF_1951 1a73cb33773d4b8fb1299b768bb341f5 389 PIRSF PIRSF036592 1 387 1.4E-215 T 14-10-2018 IPR012071 Chemotaxis glutamate methyltransferase XF_2135 906427c883abfab6fed9ba1743bba1d6 256 SUPERFAMILY SSF52833 40 246 2.92E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_2135 906427c883abfab6fed9ba1743bba1d6 256 Pfam PF01323 DSBA-like thioredoxin domain 42 241 4.5E-51 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 XF_2135 906427c883abfab6fed9ba1743bba1d6 256 Gene3D G3DSA:3.40.30.10 39 243 1.2E-59 T 14-10-2018 XF_0292 7927ef0aaefbb67a137be793141bbbb1 886 ProSitePatterns PS00450 Aconitase family signature 1. 728 745 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XF_0292 7927ef0aaefbb67a137be793141bbbb1 886 SUPERFAMILY SSF52016 181 391 9.81E-65 T 14-10-2018 XF_0292 7927ef0aaefbb67a137be793141bbbb1 886 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 20 877 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XF_0292 7927ef0aaefbb67a137be793141bbbb1 886 Gene3D G3DSA:3.30.499.10 428 555 6.8E-148 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XF_0292 7927ef0aaefbb67a137be793141bbbb1 886 SUPERFAMILY SSF53732 398 879 4.45E-145 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 XF_0292 7927ef0aaefbb67a137be793141bbbb1 886 Gene3D G3DSA:3.40.1060.10 404 707 6.8E-148 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 XF_0292 7927ef0aaefbb67a137be793141bbbb1 886 Pfam PF06434 Aconitate hydratase 2 N-terminus 187 401 1.6E-93 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XF_0292 7927ef0aaefbb67a137be793141bbbb1 886 Pfam PF00330 Aconitase family (aconitate hydratase) 497 840 6.4E-39 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_0292 7927ef0aaefbb67a137be793141bbbb1 886 Gene3D G3DSA:3.30.499.10 709 885 6.3E-64 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XF_0292 7927ef0aaefbb67a137be793141bbbb1 886 Pfam PF11791 Aconitate B N-terminal domain 23 175 1.7E-60 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XF_0292 7927ef0aaefbb67a137be793141bbbb1 886 Gene3D G3DSA:3.20.19.10 181 380 2.7E-68 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 XF_0292 7927ef0aaefbb67a137be793141bbbb1 886 SUPERFAMILY SSF74778 20 179 2.35E-63 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XF_0292 7927ef0aaefbb67a137be793141bbbb1 886 Gene3D G3DSA:1.25.40.310 20 180 5.3E-64 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XF_0292 7927ef0aaefbb67a137be793141bbbb1 886 PIRSF PIRSF036687 18 884 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XF_0811 1f1b75c41b3cf0de9cb9f8cc9667d9d7 286 SUPERFAMILY SSF53335 73 273 2.47E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0811 1f1b75c41b3cf0de9cb9f8cc9667d9d7 286 Gene3D G3DSA:3.40.50.150 125 280 3.0E-14 T 14-10-2018 XF_1177 86614b0c318f6e0591fec61b1b690797 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.144 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1177 86614b0c318f6e0591fec61b1b690797 126 Gene3D G3DSA:3.90.1030.10 1 116 3.8E-41 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1177 86614b0c318f6e0591fec61b1b690797 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1177 86614b0c318f6e0591fec61b1b690797 126 Pfam PF01196 Ribosomal protein L17 20 115 2.6E-29 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1177 86614b0c318f6e0591fec61b1b690797 126 SUPERFAMILY SSF64263 1 119 5.36E-46 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1177 86614b0c318f6e0591fec61b1b690797 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 116 5.0E-42 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0743 ed7166dce18f2319209eea5dc6c01e0e 99 SMART SM00411 3 92 1.3E-40 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_0743 ed7166dce18f2319209eea5dc6c01e0e 99 SUPERFAMILY SSF47729 3 92 1.44E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XF_0743 ed7166dce18f2319209eea5dc6c01e0e 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 29.342 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 XF_0743 ed7166dce18f2319209eea5dc6c01e0e 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.1E-15 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_0743 ed7166dce18f2319209eea5dc6c01e0e 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.1E-15 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_0743 ed7166dce18f2319209eea5dc6c01e0e 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.1E-15 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_0743 ed7166dce18f2319209eea5dc6c01e0e 99 Gene3D G3DSA:4.10.520.10 1 96 2.1E-35 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XF_0743 ed7166dce18f2319209eea5dc6c01e0e 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.8E-30 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_0743 ed7166dce18f2319209eea5dc6c01e0e 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 XF_0743 ed7166dce18f2319209eea5dc6c01e0e 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 6.8E-45 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 XF_2085 f7819a3360518a52377f44c158ea409e 205 Gene3D G3DSA:1.10.357.10 12 204 5.9E-27 T 14-10-2018 XF_2085 f7819a3360518a52377f44c158ea409e 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 2.5E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XF_2085 f7819a3360518a52377f44c158ea409e 205 SUPERFAMILY SSF48498 90 204 6.58E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XF_2085 f7819a3360518a52377f44c158ea409e 205 SUPERFAMILY SSF46689 12 95 2.72E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XF_2085 f7819a3360518a52377f44c158ea409e 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 6.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XF_2085 f7819a3360518a52377f44c158ea409e 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 6.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XF_1190 0ae240216ae7286ba02d60c612d59ad2 94 SUPERFAMILY SSF47729 1 90 6.92E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XF_1190 0ae240216ae7286ba02d60c612d59ad2 94 Gene3D G3DSA:4.10.520.10 1 93 8.1E-35 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XF_1190 0ae240216ae7286ba02d60c612d59ad2 94 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_1190 0ae240216ae7286ba02d60c612d59ad2 94 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_1190 0ae240216ae7286ba02d60c612d59ad2 94 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_1190 0ae240216ae7286ba02d60c612d59ad2 94 SMART SM00411 1 90 4.5E-41 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_1190 0ae240216ae7286ba02d60c612d59ad2 94 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.5E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_2675 89586082ba4b0451cd6ff6082ed3e266 345 PIRSF PIRSF028415 16 344 3.4E-202 T 14-10-2018 IPR014545 Uncharacterised conserved protein UCP028415 XF_2675 89586082ba4b0451cd6ff6082ed3e266 345 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 113 322 1.5E-103 T 14-10-2018 IPR019262 Domain of unknown function DUF2272 XF_1833 b4bfa017d6a0c47a214e7424a2da5d7a 552 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 444 3.5E-180 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 XF_1833 b4bfa017d6a0c47a214e7424a2da5d7a 552 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 549 50.817 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 XF_1833 b4bfa017d6a0c47a214e7424a2da5d7a 552 SUPERFAMILY SSF56112 92 434 9.48E-34 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily XF_1833 b4bfa017d6a0c47a214e7424a2da5d7a 552 Pfam PF03109 ABC1 family 110 227 2.8E-33 T 14-10-2018 IPR004147 UbiB domain XF_0933 0bfced99ad6d1ab33a36cf4735c2fa53 617 Pfam PF07670 Nucleoside recognition 284 378 1.6E-11 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 XF_0933 0bfced99ad6d1ab33a36cf4735c2fa53 617 Pfam PF07670 Nucleoside recognition 453 586 1.4E-24 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 XF_0933 0bfced99ad6d1ab33a36cf4735c2fa53 617 Gene3D G3DSA:3.40.50.300 6 205 6.9E-43 T 14-10-2018 XF_0933 0bfced99ad6d1ab33a36cf4735c2fa53 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 29 47 2.4E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_0933 0bfced99ad6d1ab33a36cf4735c2fa53 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 8 28 2.4E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_0933 0bfced99ad6d1ab33a36cf4735c2fa53 617 SUPERFAMILY SSF52540 3 168 7.38E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0933 0bfced99ad6d1ab33a36cf4735c2fa53 617 Pfam PF02421 Ferrous iron transport protein B 7 166 1.5E-53 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 XF_0933 0bfced99ad6d1ab33a36cf4735c2fa53 617 Pfam PF07664 Ferrous iron transport protein B C terminus 396 448 1.6E-15 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 Gene3D G3DSA:3.40.30.80 41 241 1.0E-55 T 14-10-2018 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 SUPERFAMILY SSF52833 41 143 6.6E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_1531 780f6064444c88b60c325e4b2bc6462c 571 SUPERFAMILY SSF51905 248 555 5.54E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1531 780f6064444c88b60c325e4b2bc6462c 571 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 41 558 3.0E-232 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PIRSF PIRSF000238 41 561 1.2E-263 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 Gene3D G3DSA:3.50.50.60 254 548 9.4E-110 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1531 780f6064444c88b60c325e4b2bc6462c 571 Gene3D G3DSA:3.50.50.60 367 490 9.4E-110 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1531 780f6064444c88b60c325e4b2bc6462c 571 SUPERFAMILY SSF52833 145 238 2.45E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 255 277 4.2E-64 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 484 505 4.2E-64 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 356 364 4.2E-64 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 518 536 4.2E-64 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 393 417 4.2E-64 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 287 302 4.2E-64 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 378 390 4.2E-64 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 461 4.2E-64 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 307 317 4.2E-64 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 254 544 6.0E-46 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 508 530 2.5E-38 T 14-10-2018 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 482 498 2.5E-38 T 14-10-2018 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 275 2.5E-38 T 14-10-2018 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 373 2.5E-38 T 14-10-2018 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 397 415 2.5E-38 T 14-10-2018 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 385 405 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 XF_1531 780f6064444c88b60c325e4b2bc6462c 571 Pfam PF13192 Thioredoxin domain 167 236 1.6E-8 T 14-10-2018 IPR012336 Thioredoxin-like fold XF_1717 26d69bb6aa20b830c70068fb20c67016 266 Pfam PF01168 Alanine racemase, N-terminal domain 44 255 3.3E-22 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_1717 26d69bb6aa20b830c70068fb20c67016 266 SUPERFAMILY SSF51419 23 253 5.1E-72 T 14-10-2018 IPR029066 PLP-binding barrel XF_1717 26d69bb6aa20b830c70068fb20c67016 266 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 31 254 27.916 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 XF_1717 26d69bb6aa20b830c70068fb20c67016 266 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 28 255 1.6E-57 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 XF_1717 26d69bb6aa20b830c70068fb20c67016 266 Gene3D G3DSA:3.20.20.10 15 265 2.3E-82 T 14-10-2018 IPR029066 PLP-binding barrel XF_1717 26d69bb6aa20b830c70068fb20c67016 266 PIRSF PIRSF004848 21 260 9.1E-68 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 Gene3D G3DSA:3.30.70.1430 46 138 2.0E-206 T 14-10-2018 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 Gene3D G3DSA:3.30.70.1430 563 657 2.0E-206 T 14-10-2018 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 SUPERFAMILY SSF82714 712 781 2.88E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 Gene3D G3DSA:3.30.70.1320 139 330 2.0E-206 T 14-10-2018 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 Gene3D G3DSA:1.20.1640.10 16 509 2.0E-206 T 14-10-2018 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 SUPERFAMILY SSF82693 561 656 2.88E-12 T 14-10-2018 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 SUPERFAMILY SSF82866 832 1056 4.58E-45 T 14-10-2018 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 6.3E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 6.3E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 6.3E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 6.3E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 6.3E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 6.3E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 PRINTS PR00702 Acriflavin resistance protein family signature 615 629 6.3E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 6.3E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 6.3E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 Gene3D G3DSA:3.30.70.1440 844 893 4.3E-75 T 14-10-2018 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 Gene3D G3DSA:3.30.70.1440 658 709 2.0E-206 T 14-10-2018 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 SUPERFAMILY SSF82693 142 328 1.23E-22 T 14-10-2018 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 Gene3D G3DSA:1.20.1640.10 894 1050 4.3E-75 T 14-10-2018 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 Gene3D G3DSA:1.20.1640.10 510 562 2.0E-206 T 14-10-2018 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 Gene3D G3DSA:3.30.2090.10 816 835 4.3E-75 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 Gene3D G3DSA:3.30.2090.10 710 786 2.0E-206 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 SUPERFAMILY SSF82866 294 495 3.01E-48 T 14-10-2018 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 Gene3D G3DSA:3.30.2090.10 183 273 2.0E-206 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 SUPERFAMILY SSF82693 46 136 3.4E-20 T 14-10-2018 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 Pfam PF00873 AcrB/AcrD/AcrF family 10 1053 4.5E-300 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2385 8ac809e791d8f0b9cf2ea2c0652d1a1b 1077 SUPERFAMILY SSF82714 187 271 4.58E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_0988 79ca9740c8f7873b0aa87ebb5e3967c9 449 SUPERFAMILY SSF51556 55 377 1.54E-88 T 14-10-2018 IPR032466 Metal-dependent hydrolase XF_0988 79ca9740c8f7873b0aa87ebb5e3967c9 449 ProSitePatterns PS00483 Dihydroorotase signature 2. 313 324 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_0988 79ca9740c8f7873b0aa87ebb5e3967c9 449 Gene3D G3DSA:2.30.40.10 6 431 3.4E-132 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XF_0988 79ca9740c8f7873b0aa87ebb5e3967c9 449 Pfam PF01979 Amidohydrolase family 52 429 2.9E-17 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 XF_0988 79ca9740c8f7873b0aa87ebb5e3967c9 449 SUPERFAMILY SSF51338 1 440 9.73E-29 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XF_0988 79ca9740c8f7873b0aa87ebb5e3967c9 449 Gene3D G3DSA:3.20.20.140 56 416 3.4E-132 T 14-10-2018 XF_2498 b106f18eaeacd564e95d8b6055a98c40 532 Pfam PF05136 Phage portal protein, lambda family 53 396 1.3E-97 T 14-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XF_2498 b106f18eaeacd564e95d8b6055a98c40 532 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 45 503 6.4E-215 T 14-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XF_0713 b106f18eaeacd564e95d8b6055a98c40 532 Pfam PF05136 Phage portal protein, lambda family 53 396 1.3E-97 T 14-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XF_0713 b106f18eaeacd564e95d8b6055a98c40 532 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 45 503 6.4E-215 T 14-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XF_0609 2e1218fdd82980dcf6d0d5970523acca 346 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 332 3.8E-133 T 14-10-2018 IPR016040 NAD(P)-binding domain XF_0609 2e1218fdd82980dcf6d0d5970523acca 346 Gene3D G3DSA:3.90.25.10 189 337 9.8E-143 T 14-10-2018 XF_0609 2e1218fdd82980dcf6d0d5970523acca 346 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 338 1.0E-140 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 XF_0609 2e1218fdd82980dcf6d0d5970523acca 346 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 342 51.858 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 XF_0609 2e1218fdd82980dcf6d0d5970523acca 346 Gene3D G3DSA:3.40.50.720 6 323 9.8E-143 T 14-10-2018 XF_0609 2e1218fdd82980dcf6d0d5970523acca 346 SUPERFAMILY SSF51735 4 335 1.56E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1230 882870daa20e31964f9d513177f4447d 162 Gene3D G3DSA:3.30.450.40 12 162 1.4E-61 T 14-10-2018 IPR029016 GAF-like domain superfamily XF_1230 882870daa20e31964f9d513177f4447d 162 Pfam PF13185 GAF domain 57 155 9.7E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 XF_1230 882870daa20e31964f9d513177f4447d 162 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 100 117 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site XF_1230 882870daa20e31964f9d513177f4447d 162 SUPERFAMILY SSF55781 15 160 1.44E-42 T 14-10-2018 XF_0132 ece9dbafe22d3cf3bb19446a52aaff8d 611 Gene3D G3DSA:2.60.40.420 490 610 2.7E-31 T 14-10-2018 IPR008972 Cupredoxin XF_0132 ece9dbafe22d3cf3bb19446a52aaff8d 611 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 43 3.6E-6 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal XF_0132 ece9dbafe22d3cf3bb19446a52aaff8d 611 Pfam PF00394 Multicopper oxidase 185 361 5.1E-31 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 XF_0132 ece9dbafe22d3cf3bb19446a52aaff8d 611 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 12 610 0.0 T 14-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 XF_0132 ece9dbafe22d3cf3bb19446a52aaff8d 611 SUPERFAMILY SSF49503 49 205 2.99E-42 T 14-10-2018 IPR008972 Cupredoxin XF_0132 ece9dbafe22d3cf3bb19446a52aaff8d 611 SUPERFAMILY SSF49503 178 388 8.94E-54 T 14-10-2018 IPR008972 Cupredoxin XF_0132 ece9dbafe22d3cf3bb19446a52aaff8d 611 ProSitePatterns PS00080 Multicopper oxidases signature 2. 592 603 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 XF_0132 ece9dbafe22d3cf3bb19446a52aaff8d 611 Pfam PF07731 Multicopper oxidase 497 610 2.4E-26 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 XF_0132 ece9dbafe22d3cf3bb19446a52aaff8d 611 Pfam PF07732 Multicopper oxidase 63 173 6.0E-40 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 XF_0132 ece9dbafe22d3cf3bb19446a52aaff8d 611 ProSitePatterns PS00079 Multicopper oxidases signature 1. 587 607 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site XF_0132 ece9dbafe22d3cf3bb19446a52aaff8d 611 Gene3D G3DSA:2.60.40.420 179 388 1.1E-37 T 14-10-2018 IPR008972 Cupredoxin XF_0132 ece9dbafe22d3cf3bb19446a52aaff8d 611 SUPERFAMILY SSF49503 461 609 3.74E-37 T 14-10-2018 IPR008972 Cupredoxin XF_0132 ece9dbafe22d3cf3bb19446a52aaff8d 611 ProSitePatterns PS00079 Multicopper oxidases signature 1. 149 169 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site XF_0132 ece9dbafe22d3cf3bb19446a52aaff8d 611 Gene3D G3DSA:2.60.40.420 39 173 4.3E-41 T 14-10-2018 IPR008972 Cupredoxin XF_1505 8772edbb2251dc76775c0d1dbd1c324b 241 SUPERFAMILY SSF54211 5 184 8.6E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_1505 8772edbb2251dc76775c0d1dbd1c324b 241 Pfam PF03725 3' exoribonuclease family, domain 2 161 226 2.2E-7 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XF_1505 8772edbb2251dc76775c0d1dbd1c324b 241 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 5 239 1.9E-111 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 XF_1505 8772edbb2251dc76775c0d1dbd1c324b 241 ProSitePatterns PS01277 Ribonuclease PH signature. 119 132 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site XF_1505 8772edbb2251dc76775c0d1dbd1c324b 241 SUPERFAMILY SSF55666 156 240 2.62E-23 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XF_1505 8772edbb2251dc76775c0d1dbd1c324b 241 Hamap MF_00564 Ribonuclease PH [rph]. 14 240 44.012 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 XF_1505 8772edbb2251dc76775c0d1dbd1c324b 241 Gene3D G3DSA:3.30.230.70 13 241 2.1E-57 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XF_1505 8772edbb2251dc76775c0d1dbd1c324b 241 Pfam PF01138 3' exoribonuclease family, domain 1 14 143 7.0E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XF_2246 ac9a4e3f862f98f3410038efb8746f1e 212 SUPERFAMILY SSF54768 94 208 1.02E-29 T 14-10-2018 XF_2246 ac9a4e3f862f98f3410038efb8746f1e 212 Hamap MF_00104 Ribonuclease 3 [rnc]. 1 205 26.01 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 XF_2246 ac9a4e3f862f98f3410038efb8746f1e 212 SUPERFAMILY SSF69065 2 143 5.58E-42 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 XF_2246 ac9a4e3f862f98f3410038efb8746f1e 212 SMART SM00535 6 134 1.2E-49 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 XF_2246 ac9a4e3f862f98f3410038efb8746f1e 212 Gene3D G3DSA:1.10.1520.10 1 132 4.1E-37 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 XF_2246 ac9a4e3f862f98f3410038efb8746f1e 212 ProSitePatterns PS00517 Ribonuclease III family signature. 23 31 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 XF_2246 ac9a4e3f862f98f3410038efb8746f1e 212 Pfam PF14622 Ribonuclease-III-like 4 123 1.3E-31 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 XF_2246 ac9a4e3f862f98f3410038efb8746f1e 212 Pfam PF00035 Double-stranded RNA binding motif 141 208 2.5E-13 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain XF_2246 ac9a4e3f862f98f3410038efb8746f1e 212 SMART SM00358 141 209 1.5E-18 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain XF_2246 ac9a4e3f862f98f3410038efb8746f1e 212 Gene3D G3DSA:3.30.160.20 139 211 1.6E-22 T 14-10-2018 XF_2246 ac9a4e3f862f98f3410038efb8746f1e 212 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 2 208 6.6E-71 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 XF_1933 42e18e4b279ca41bfde5a8acf213e303 264 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 3 256 8.4E-79 T 14-10-2018 XF_1933 42e18e4b279ca41bfde5a8acf213e303 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 249 1.8E-21 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase XF_1933 42e18e4b279ca41bfde5a8acf213e303 264 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 213 224 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 XF_1933 42e18e4b279ca41bfde5a8acf213e303 264 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 XF_1933 42e18e4b279ca41bfde5a8acf213e303 264 SUPERFAMILY SSF56219 3 257 2.62E-77 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XF_1933 42e18e4b279ca41bfde5a8acf213e303 264 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 3 256 8.8E-76 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 XF_1933 42e18e4b279ca41bfde5a8acf213e303 264 Gene3D G3DSA:3.60.10.10 3 257 4.4E-69 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XF_0799 ddafd6eb0dddb1a789b7f8d8baf8de72 320 Gene3D G3DSA:3.40.50.20 8 102 3.2E-25 T 14-10-2018 XF_0799 ddafd6eb0dddb1a789b7f8d8baf8de72 320 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 261 290 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_0799 ddafd6eb0dddb1a789b7f8d8baf8de72 320 SUPERFAMILY SSF56059 114 318 1.0E-47 T 14-10-2018 XF_0799 ddafd6eb0dddb1a789b7f8d8baf8de72 320 SUPERFAMILY SSF52440 20 114 2.3E-24 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XF_0799 ddafd6eb0dddb1a789b7f8d8baf8de72 320 Pfam PF01820 D-ala D-ala ligase N-terminus 20 104 5.6E-14 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_0799 ddafd6eb0dddb1a789b7f8d8baf8de72 320 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 20 319 1.6E-105 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_0799 ddafd6eb0dddb1a789b7f8d8baf8de72 320 Gene3D G3DSA:3.30.470.20 103 316 1.8E-69 T 14-10-2018 XF_0799 ddafd6eb0dddb1a789b7f8d8baf8de72 320 Gene3D G3DSA:3.30.1490.20 129 197 1.8E-69 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XF_0799 ddafd6eb0dddb1a789b7f8d8baf8de72 320 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 81 92 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_0799 ddafd6eb0dddb1a789b7f8d8baf8de72 320 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 19 320 34.199 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_0799 ddafd6eb0dddb1a789b7f8d8baf8de72 320 Pfam PF07478 D-ala D-ala ligase C-terminus 122 317 2.3E-53 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_0799 ddafd6eb0dddb1a789b7f8d8baf8de72 320 PIRSF PIRSF039102 57 320 6.6E-79 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_0799 ddafd6eb0dddb1a789b7f8d8baf8de72 320 PIRSF PIRSF039102 18 59 9.7E-7 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_1997 c4b4bd431992a4be8037ed9a7f46d0e6 219 Pfam PF11906 Protein of unknown function (DUF3426) 74 218 2.7E-33 T 14-10-2018 IPR021834 Protein of unknown function DUF3426 XF_0927 48b0893b79807b0f394d425249d92d8b 307 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XF_0927 48b0893b79807b0f394d425249d92d8b 307 Gene3D G3DSA:3.40.50.170 1 205 1.5E-73 T 14-10-2018 XF_0927 48b0893b79807b0f394d425249d92d8b 307 Gene3D G3DSA:3.10.25.10 206 307 2.1E-28 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XF_0927 48b0893b79807b0f394d425249d92d8b 307 SUPERFAMILY SSF53328 1 205 5.76E-62 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XF_0927 48b0893b79807b0f394d425249d92d8b 307 SUPERFAMILY SSF50486 205 302 8.44E-28 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 XF_0927 48b0893b79807b0f394d425249d92d8b 307 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 302 7.4E-89 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 XF_0927 48b0893b79807b0f394d425249d92d8b 307 Pfam PF02911 Formyl transferase, C-terminal domain 203 299 4.6E-24 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XF_0927 48b0893b79807b0f394d425249d92d8b 307 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 303 35.754 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 XF_0927 48b0893b79807b0f394d425249d92d8b 307 Pfam PF00551 Formyl transferase 10 176 2.9E-43 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XF_0449 6caaed83a7f32b4a7c159c158fa0375c 116 PIRSF PIRSF021239 5 116 1.2E-49 T 14-10-2018 IPR007437 Protein of unknown function DUF486 XF_0449 6caaed83a7f32b4a7c159c158fa0375c 116 SUPERFAMILY SSF103481 78 115 5.36E-5 T 14-10-2018 XF_0449 6caaed83a7f32b4a7c159c158fa0375c 116 Pfam PF04342 Putative member of DMT superfamily (DUF486) 12 114 2.0E-43 T 14-10-2018 IPR007437 Protein of unknown function DUF486 XF_2353 fe9272660cecdb50aee3e26065b7b186 237 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 4 236 31.555 T 14-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 XF_2353 fe9272660cecdb50aee3e26065b7b186 237 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 52 92 - T 14-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 XF_2353 fe9272660cecdb50aee3e26065b7b186 237 SUPERFAMILY SSF53167 5 233 1.39E-72 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 XF_2353 fe9272660cecdb50aee3e26065b7b186 237 Pfam PF01048 Phosphorylase superfamily 6 219 1.1E-37 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 XF_2353 fe9272660cecdb50aee3e26065b7b186 237 Gene3D G3DSA:3.40.50.1580 1 236 4.4E-74 T 14-10-2018 XF_1445 2f59ce3ed405aff5f2d3182dabea94d9 72 SMART SM00316 4 72 1.7E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 XF_1445 2f59ce3ed405aff5f2d3182dabea94d9 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.9E-26 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 XF_1445 2f59ce3ed405aff5f2d3182dabea94d9 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 9.9E-37 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 XF_1445 2f59ce3ed405aff5f2d3182dabea94d9 72 SUPERFAMILY SSF50249 1 70 1.01E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1445 2f59ce3ed405aff5f2d3182dabea94d9 72 Gene3D G3DSA:2.40.50.140 1 72 2.1E-36 T 14-10-2018 XF_1445 2f59ce3ed405aff5f2d3182dabea94d9 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.187 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 XF_0167 c47dea24a1310e6726a777b5569f5d7b 417 SUPERFAMILY SSF51261 117 364 7.85E-70 T 14-10-2018 IPR011055 Duplicated hybrid motif XF_0167 c47dea24a1310e6726a777b5569f5d7b 417 Pfam PF01551 Peptidase family M23 266 362 7.1E-33 T 14-10-2018 IPR016047 Peptidase M23 XF_0167 c47dea24a1310e6726a777b5569f5d7b 417 Gene3D G3DSA:3.10.450.350 142 383 2.9E-86 T 14-10-2018 XF_0167 c47dea24a1310e6726a777b5569f5d7b 417 Gene3D G3DSA:3.10.450.350 35 125 9.4E-14 T 14-10-2018 XF_0167 c47dea24a1310e6726a777b5569f5d7b 417 Pfam PF04225 Opacity-associated protein A LysM-like domain 43 110 2.3E-6 T 14-10-2018 IPR007340 Opacity-associated protein A XF_0167 c47dea24a1310e6726a777b5569f5d7b 417 Gene3D G3DSA:2.70.70.10 239 368 2.9E-86 T 14-10-2018 IPR011055 Duplicated hybrid motif XF_2705 9b8f664427ef7db84d9f75a8b0ba33c6 455 Gene3D G3DSA:2.70.70.10 320 453 6.5E-33 T 14-10-2018 IPR011055 Duplicated hybrid motif XF_2705 9b8f664427ef7db84d9f75a8b0ba33c6 455 SUPERFAMILY SSF51261 233 452 1.26E-44 T 14-10-2018 IPR011055 Duplicated hybrid motif XF_2705 9b8f664427ef7db84d9f75a8b0ba33c6 455 Pfam PF01551 Peptidase family M23 355 448 4.4E-26 T 14-10-2018 IPR016047 Peptidase M23 XF_1534 baa11d6f0af740a1134440847a5ad937 80 PRINTS PR01249 Ribosomal protein L31 signature 60 78 2.3E-18 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1534 baa11d6f0af740a1134440847a5ad937 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.3E-18 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1534 baa11d6f0af740a1134440847a5ad937 80 PRINTS PR01249 Ribosomal protein L31 signature 45 60 2.3E-18 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1534 baa11d6f0af740a1134440847a5ad937 80 Gene3D G3DSA:2.30.170.50 1 80 1.3E-25 T 14-10-2018 XF_1534 baa11d6f0af740a1134440847a5ad937 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.3E-20 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1534 baa11d6f0af740a1134440847a5ad937 80 Pfam PF01197 Ribosomal protein L31 1 79 1.1E-29 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1534 baa11d6f0af740a1134440847a5ad937 80 SUPERFAMILY SSF143800 1 79 7.06E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1534 baa11d6f0af740a1134440847a5ad937 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1534 baa11d6f0af740a1134440847a5ad937 80 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.973 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2149 44888277fb2955eff35ffee9ae833806 127 Pfam PF04379 ApaG domain 20 104 1.1E-33 T 14-10-2018 IPR007474 ApaG domain XF_2149 44888277fb2955eff35ffee9ae833806 127 Gene3D G3DSA:2.60.40.1470 1 127 2.7E-46 T 14-10-2018 IPR036767 ApaG domain superfamily XF_2149 44888277fb2955eff35ffee9ae833806 127 SUPERFAMILY SSF110069 6 127 1.83E-46 T 14-10-2018 IPR036767 ApaG domain superfamily XF_2149 44888277fb2955eff35ffee9ae833806 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 31.609 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG XF_1488 f10f663069966a9a15046192be4b8a7c 671 SUPERFAMILY SSF48371 523 656 5.06E-39 T 14-10-2018 IPR016024 Armadillo-type fold XF_1488 f10f663069966a9a15046192be4b8a7c 671 Gene3D G3DSA:1.25.40.320 517 657 1.3E-39 T 14-10-2018 IPR038502 Peptidase M1 LTA-4 hydrolase/aminopeptidase, C-terminal domain superfamily XF_1488 f10f663069966a9a15046192be4b8a7c 671 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 202 217 1.2E-16 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XF_1488 f10f663069966a9a15046192be4b8a7c 671 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 367 379 1.2E-16 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XF_1488 f10f663069966a9a15046192be4b8a7c 671 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 247 262 1.2E-16 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XF_1488 f10f663069966a9a15046192be4b8a7c 671 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 321 331 1.2E-16 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XF_1488 f10f663069966a9a15046192be4b8a7c 671 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 348 363 1.2E-16 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XF_1488 f10f663069966a9a15046192be4b8a7c 671 Pfam PF01433 Peptidase family M1 domain 273 485 7.3E-49 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XF_1488 f10f663069966a9a15046192be4b8a7c 671 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 545 655 3.3E-27 T 14-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 XF_1488 f10f663069966a9a15046192be4b8a7c 671 SMART SM01263 517 656 2.4E-49 T 14-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 XF_1488 f10f663069966a9a15046192be4b8a7c 671 SUPERFAMILY SSF63737 65 264 2.48E-38 T 14-10-2018 XF_1488 f10f663069966a9a15046192be4b8a7c 671 Gene3D G3DSA:1.10.390.10 361 515 3.1E-43 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily XF_1488 f10f663069966a9a15046192be4b8a7c 671 Gene3D G3DSA:2.60.40.1730 77 263 1.6E-57 T 14-10-2018 XF_1488 f10f663069966a9a15046192be4b8a7c 671 SUPERFAMILY SSF55486 269 511 7.33E-66 T 14-10-2018 XF_1488 f10f663069966a9a15046192be4b8a7c 671 Gene3D G3DSA:1.10.1740.60 264 360 1.3E-43 T 14-10-2018 XF_1851 44a1dd7a0e63ba51d075554cbd4a48e2 1000 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 377 387 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site XF_1851 44a1dd7a0e63ba51d075554cbd4a48e2 1000 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 126 137 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site XF_1851 44a1dd7a0e63ba51d075554cbd4a48e2 1000 Pfam PF00082 Subtilase family 121 427 5.2E-36 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 XF_1851 44a1dd7a0e63ba51d075554cbd4a48e2 1000 Gene3D G3DSA:2.40.128.130 690 1000 5.3E-32 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily XF_1851 44a1dd7a0e63ba51d075554cbd4a48e2 1000 Pfam PF12951 Passenger-associated-transport-repeat 467 497 1.3E-9 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat XF_1851 44a1dd7a0e63ba51d075554cbd4a48e2 1000 PRINTS PR00723 Subtilisin serine protease family (S8) signature 121 140 1.1E-10 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related XF_1851 44a1dd7a0e63ba51d075554cbd4a48e2 1000 PRINTS PR00723 Subtilisin serine protease family (S8) signature 376 392 1.1E-10 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related XF_1851 44a1dd7a0e63ba51d075554cbd4a48e2 1000 PRINTS PR00723 Subtilisin serine protease family (S8) signature 164 177 1.1E-10 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related XF_1851 44a1dd7a0e63ba51d075554cbd4a48e2 1000 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 466 498 1.1E-11 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat XF_1851 44a1dd7a0e63ba51d075554cbd4a48e2 1000 SUPERFAMILY SSF52743 102 438 7.72E-55 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XF_1851 44a1dd7a0e63ba51d075554cbd4a48e2 1000 Gene3D G3DSA:3.40.50.200 99 438 6.4E-56 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XF_1851 44a1dd7a0e63ba51d075554cbd4a48e2 1000 SUPERFAMILY SSF103515 698 995 3.27E-31 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily XF_1851 44a1dd7a0e63ba51d075554cbd4a48e2 1000 SMART SM00869 732 990 5.5E-20 T 14-10-2018 IPR005546 Autotransporter beta-domain XF_1851 44a1dd7a0e63ba51d075554cbd4a48e2 1000 Pfam PF03797 Autotransporter beta-domain 739 969 3.7E-28 T 14-10-2018 IPR005546 Autotransporter beta-domain XF_1373 c744abd935497b871ce75637bd488572 257 Gene3D G3DSA:3.30.70.660 107 242 2.0E-44 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 XF_1373 c744abd935497b871ce75637bd488572 257 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 30.421 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_1373 c744abd935497b871ce75637bd488572 257 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 239 3.3E-56 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_1373 c744abd935497b871ce75637bd488572 257 Gene3D G3DSA:3.30.70.580 1 106 3.2E-31 T 14-10-2018 XF_1373 c744abd935497b871ce75637bd488572 257 PIRSF PIRSF001430 1 254 3.4E-65 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_1373 c744abd935497b871ce75637bd488572 257 SUPERFAMILY SSF55120 1 251 1.44E-80 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_1373 c744abd935497b871ce75637bd488572 257 Pfam PF01416 tRNA pseudouridine synthase 144 245 1.2E-25 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_2130 88a36873ddb22209cec5edad23193cfd 74 Pfam PF13986 Domain of unknown function (DUF4224) 15 57 1.5E-14 T 14-10-2018 IPR025319 Domain of unknown function DUF4224 XF_0174 dae3e1518f12958228009334f03668b0 548 Gene3D G3DSA:3.40.50.300 84 391 5.2E-108 T 14-10-2018 XF_0174 dae3e1518f12958228009334f03668b0 548 Gene3D G3DSA:3.30.70.3280 402 541 7.1E-50 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily XF_0174 dae3e1518f12958228009334f03668b0 548 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 28 165 1.3E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XF_0174 dae3e1518f12958228009334f03668b0 548 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 70 85 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site XF_0174 dae3e1518f12958228009334f03668b0 548 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 15 541 1.4E-246 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 XF_0174 dae3e1518f12958228009334f03668b0 548 PRINTS PR00315 GTP-binding elongation factor signature 77 85 2.5E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_0174 dae3e1518f12958228009334f03668b0 548 PRINTS PR00315 GTP-binding elongation factor signature 113 124 2.5E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_0174 dae3e1518f12958228009334f03668b0 548 PRINTS PR00315 GTP-binding elongation factor signature 149 158 2.5E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_0174 dae3e1518f12958228009334f03668b0 548 PRINTS PR00315 GTP-binding elongation factor signature 97 107 2.5E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_0174 dae3e1518f12958228009334f03668b0 548 PRINTS PR00315 GTP-binding elongation factor signature 27 40 2.5E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_0174 dae3e1518f12958228009334f03668b0 548 Gene3D G3DSA:3.40.50.300 122 287 5.2E-108 T 14-10-2018 XF_0174 dae3e1518f12958228009334f03668b0 548 Pfam PF00009 Elongation factor Tu GTP binding domain 25 290 4.4E-48 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XF_0174 dae3e1518f12958228009334f03668b0 548 SUPERFAMILY SSF54980 405 480 3.96E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like XF_0174 dae3e1518f12958228009334f03668b0 548 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 16 539 51.892 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 XF_0174 dae3e1518f12958228009334f03668b0 548 Pfam PF16658 Class II release factor RF3, C-terminal domain 399 526 9.0E-46 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal XF_0174 dae3e1518f12958228009334f03668b0 548 SUPERFAMILY SSF52540 22 290 1.5E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0174 dae3e1518f12958228009334f03668b0 548 SUPERFAMILY SSF50447 273 405 3.06E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XF_1897 e6cb1096dc949a475706f9f15b8b7702 430 Gene3D G3DSA:2.120.10.30 159 430 8.0E-85 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XF_1897 e6cb1096dc949a475706f9f15b8b7702 430 Pfam PF07676 WD40-like Beta Propeller Repeat 234 267 9.5E-6 T 14-10-2018 IPR011659 WD40-like Beta Propeller XF_1897 e6cb1096dc949a475706f9f15b8b7702 430 Pfam PF07676 WD40-like Beta Propeller Repeat 277 310 5.4E-15 T 14-10-2018 IPR011659 WD40-like Beta Propeller XF_1897 e6cb1096dc949a475706f9f15b8b7702 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 1.2E-6 T 14-10-2018 IPR011659 WD40-like Beta Propeller XF_1897 e6cb1096dc949a475706f9f15b8b7702 430 Pfam PF04052 TolB amino-terminal domain 18 123 1.3E-29 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 XF_1897 e6cb1096dc949a475706f9f15b8b7702 430 SUPERFAMILY SSF52964 24 155 7.45E-36 T 14-10-2018 XF_1897 e6cb1096dc949a475706f9f15b8b7702 430 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 1 423 47.203 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 XF_1897 e6cb1096dc949a475706f9f15b8b7702 430 Gene3D G3DSA:3.40.50.10070 15 158 5.2E-40 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 XF_1897 e6cb1096dc949a475706f9f15b8b7702 430 SUPERFAMILY SSF69304 150 425 9.02E-50 T 14-10-2018 XF_1897 e6cb1096dc949a475706f9f15b8b7702 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 12 424 1.1E-157 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 Gene3D G3DSA:1.10.8.60 270 341 4.9E-20 T 14-10-2018 XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 SUPERFAMILY SSF48295 336 438 2.88E-34 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 436 3.3E-162 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 Gene3D G3DSA:1.10.1750.10 346 439 2.3E-33 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 Pfam PF00308 Bacterial dnaA protein 103 321 2.4E-85 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 350 416 1.6E-29 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 SMART SM00760 347 416 1.3E-39 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 ProSitePatterns PS01008 DnaA protein signature. 397 416 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 SMART SM00382 136 267 6.8E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 Gene3D G3DSA:3.40.50.300 94 268 6.5E-45 T 14-10-2018 XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 397 416 1.1E-46 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 235 262 1.1E-46 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 169 183 1.1E-46 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 201 215 1.1E-46 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 137 157 1.1E-46 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 Gene3D G3DSA:3.30.300.180 1 93 8.4E-20 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 SUPERFAMILY SSF52540 104 315 1.24E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 Pfam PF11638 DnaA N-terminal domain 1 62 6.7E-14 T 14-10-2018 IPR024633 DnaA N-terminal domain XF_0001 6853aafa11c9c34fe0ff32b22a471166 439 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 438 32.07 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 XF_a0007 5aea5b517964cf7366eb4399800a186f 815 Gene3D G3DSA:3.40.50.300 600 780 9.2E-24 T 14-10-2018 XF_a0007 5aea5b517964cf7366eb4399800a186f 815 SUPERFAMILY SSF52540 411 774 6.39E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_a0007 5aea5b517964cf7366eb4399800a186f 815 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 12 808 8.8E-247 T 14-10-2018 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 XF_a0007 5aea5b517964cf7366eb4399800a186f 815 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 180 382 6.9E-44 T 14-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 XF_1780 b6cd84354e9dcd392d9848b3b2d38eec 249 Pfam PF08900 Domain of unknown function (DUF1845) 12 211 2.5E-67 T 14-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 XF_1780 b6cd84354e9dcd392d9848b3b2d38eec 249 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 13 214 5.1E-77 T 14-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 XF_2216 f4b475b3e236d7baf6925b9c8bfb61be 200 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 197 32.465 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 XF_2216 f4b475b3e236d7baf6925b9c8bfb61be 200 SUPERFAMILY SSF52317 4 197 2.85E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_2216 f4b475b3e236d7baf6925b9c8bfb61be 200 PRINTS PR00097 Anthranilate synthase component II signature 73 84 6.3E-5 T 14-10-2018 XF_2216 f4b475b3e236d7baf6925b9c8bfb61be 200 PRINTS PR00097 Anthranilate synthase component II signature 42 51 6.3E-5 T 14-10-2018 XF_2216 f4b475b3e236d7baf6925b9c8bfb61be 200 PRINTS PR00097 Anthranilate synthase component II signature 175 188 6.3E-5 T 14-10-2018 XF_2216 f4b475b3e236d7baf6925b9c8bfb61be 200 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 197 1.0E-67 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 XF_2216 f4b475b3e236d7baf6925b9c8bfb61be 200 Pfam PF00117 Glutamine amidotransferase class-I 6 195 2.0E-17 T 14-10-2018 IPR017926 Glutamine amidotransferase XF_2216 f4b475b3e236d7baf6925b9c8bfb61be 200 PIRSF PIRSF000495 2 200 2.5E-61 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 XF_2216 f4b475b3e236d7baf6925b9c8bfb61be 200 Gene3D G3DSA:3.40.50.880 1 200 1.7E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_1949 e62e52e236540324b13d54d79dfa7650 485 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 462 2.9E-161 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 XF_1949 e62e52e236540324b13d54d79dfa7650 485 SUPERFAMILY SSF56235 2 255 4.72E-65 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XF_1949 e62e52e236540324b13d54d79dfa7650 485 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 462 44.87 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 XF_1949 e62e52e236540324b13d54d79dfa7650 485 PIRSF PIRSF000485 1 476 3.5E-155 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 XF_1949 e62e52e236540324b13d54d79dfa7650 485 SUPERFAMILY SSF53271 248 471 5.25E-70 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like XF_1949 e62e52e236540324b13d54d79dfa7650 485 Gene3D G3DSA:3.40.50.2020 273 442 2.0E-145 T 14-10-2018 XF_1949 e62e52e236540324b13d54d79dfa7650 485 Pfam PF13522 Glutamine amidotransferase domain 57 206 4.5E-15 T 14-10-2018 XF_1949 e62e52e236540324b13d54d79dfa7650 485 Gene3D G3DSA:3.60.20.10 2 463 2.0E-145 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XF_2230 1a326991a6e9175a9202dd3300d823ea 396 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 40 267 6.1E-77 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 XF_2230 1a326991a6e9175a9202dd3300d823ea 396 SUPERFAMILY SSF69189 288 380 6.67E-25 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XF_2230 1a326991a6e9175a9202dd3300d823ea 396 Gene3D G3DSA:2.60.410.10 288 378 7.8E-30 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XF_2230 1a326991a6e9175a9202dd3300d823ea 396 Gene3D G3DSA:3.40.710.10 27 286 2.2E-84 T 14-10-2018 XF_2230 1a326991a6e9175a9202dd3300d823ea 396 SUPERFAMILY SSF56601 5 288 5.52E-79 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XF_2230 1a326991a6e9175a9202dd3300d823ea 396 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 288 378 1.4E-24 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XF_2230 1a326991a6e9175a9202dd3300d823ea 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 128 145 6.1E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XF_2230 1a326991a6e9175a9202dd3300d823ea 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 6.1E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XF_2230 1a326991a6e9175a9202dd3300d823ea 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 155 168 6.1E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XF_2230 1a326991a6e9175a9202dd3300d823ea 396 SMART SM00936 288 378 1.7E-31 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XF_0363 52f63627e7261d81db8bd8bc14a28a1e 242 Pfam PF00691 OmpA family 127 222 2.5E-22 T 14-10-2018 IPR006665 OmpA-like domain XF_0363 52f63627e7261d81db8bd8bc14a28a1e 242 Pfam PF13488 Glycine zipper 52 97 1.5E-11 T 14-10-2018 IPR039567 Glycine zipper domain XF_0363 52f63627e7261d81db8bd8bc14a28a1e 242 PRINTS PR01021 OMPA domain signature 128 150 1.1E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XF_0363 52f63627e7261d81db8bd8bc14a28a1e 242 PRINTS PR01021 OMPA domain signature 173 189 1.1E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XF_0363 52f63627e7261d81db8bd8bc14a28a1e 242 PRINTS PR01021 OMPA domain signature 158 173 1.1E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XF_0363 52f63627e7261d81db8bd8bc14a28a1e 242 ProSitePatterns PS01068 OmpA-like domain. 160 204 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 XF_0363 52f63627e7261d81db8bd8bc14a28a1e 242 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 173 190 1.6E-9 T 14-10-2018 XF_0363 52f63627e7261d81db8bd8bc14a28a1e 242 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 211 231 1.6E-9 T 14-10-2018 XF_0363 52f63627e7261d81db8bd8bc14a28a1e 242 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 191 210 1.6E-9 T 14-10-2018 XF_0363 52f63627e7261d81db8bd8bc14a28a1e 242 Gene3D G3DSA:3.30.1330.60 91 236 5.5E-47 T 14-10-2018 IPR036737 OmpA-like domain superfamily XF_0363 52f63627e7261d81db8bd8bc14a28a1e 242 SUPERFAMILY SSF103088 115 230 1.44E-39 T 14-10-2018 IPR036737 OmpA-like domain superfamily XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 SUPERFAMILY SSF48557 28 414 3.46E-87 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 Pfam PF00206 Lyase 39 307 7.2E-47 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 Gene3D G3DSA:1.10.40.30 368 406 1.3E-103 T 14-10-2018 XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 TIGRFAM TIGR00838 argH: argininosuccinate lyase 29 403 1.9E-86 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 PRINTS PR00149 Fumarate lyase superfamily signature 284 300 6.6E-14 T 14-10-2018 IPR000362 Fumarate lyase family XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 PRINTS PR00149 Fumarate lyase superfamily signature 155 173 6.6E-14 T 14-10-2018 IPR000362 Fumarate lyase family XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 PRINTS PR00149 Fumarate lyase superfamily signature 110 128 6.6E-14 T 14-10-2018 IPR000362 Fumarate lyase family XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 Hamap MF_00006 Argininosuccinate lyase [argH]. 9 434 30.091 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 Gene3D G3DSA:1.10.275.10 39 237 1.3E-103 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 Gene3D G3DSA:1.20.200.10 127 367 1.3E-103 T 14-10-2018 XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 PRINTS PR00145 Argininosuccinate lyase family signature 284 300 2.7E-30 T 14-10-2018 XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 PRINTS PR00145 Argininosuccinate lyase family signature 318 337 2.7E-30 T 14-10-2018 XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 PRINTS PR00145 Argininosuccinate lyase family signature 150 170 2.7E-30 T 14-10-2018 XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 PRINTS PR00145 Argininosuccinate lyase family signature 109 131 2.7E-30 T 14-10-2018 XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 PRINTS PR00145 Argininosuccinate lyase family signature 201 217 2.7E-30 T 14-10-2018 XF_1003 2785d8cdad9cfb791e7d09a9b5190036 445 ProSitePatterns PS00163 Fumarate lyases signature. 284 293 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 XF_1610 1df1f0afffa577bf6fb1475778f05312 338 SUPERFAMILY SSF53613 12 334 1.42E-75 T 14-10-2018 IPR029056 Ribokinase-like XF_1610 1df1f0afffa577bf6fb1475778f05312 338 Pfam PF00294 pfkB family carbohydrate kinase 13 325 1.5E-58 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB XF_1610 1df1f0afffa577bf6fb1475778f05312 338 Gene3D G3DSA:3.40.1190.20 9 338 4.6E-135 T 14-10-2018 IPR029056 Ribokinase-like XF_1610 1df1f0afffa577bf6fb1475778f05312 338 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 44 68 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XF_1610 1df1f0afffa577bf6fb1475778f05312 338 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 264 277 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XF_1413 604aa89ccfd6bf2567d016ce2cc46324 333 Gene3D G3DSA:3.40.50.10490 12 204 1.5E-60 T 14-10-2018 XF_1413 604aa89ccfd6bf2567d016ce2cc46324 333 Pfam PF01380 SIS domain 50 181 1.8E-29 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XF_1413 604aa89ccfd6bf2567d016ce2cc46324 333 PIRSF PIRSF004692 4 333 8.3E-135 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 XF_1413 604aa89ccfd6bf2567d016ce2cc46324 333 Pfam PF00571 CBS domain 279 330 5.2E-7 T 14-10-2018 IPR000644 CBS domain XF_1413 604aa89ccfd6bf2567d016ce2cc46324 333 Pfam PF00571 CBS domain 211 267 7.3E-9 T 14-10-2018 IPR000644 CBS domain XF_1413 604aa89ccfd6bf2567d016ce2cc46324 333 SMART SM00116 284 332 4.4E-4 T 14-10-2018 IPR000644 CBS domain XF_1413 604aa89ccfd6bf2567d016ce2cc46324 333 SMART SM00116 219 267 5.2E-5 T 14-10-2018 IPR000644 CBS domain XF_1413 604aa89ccfd6bf2567d016ce2cc46324 333 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 54 323 5.0E-112 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 XF_1413 604aa89ccfd6bf2567d016ce2cc46324 333 SUPERFAMILY SSF53697 20 330 7.56E-69 T 14-10-2018 XF_1413 604aa89ccfd6bf2567d016ce2cc46324 333 Gene3D G3DSA:3.10.580.10 205 330 4.3E-46 T 14-10-2018 XF_1960 b64cde8c88e6395e5d1ba6343fc9599c 307 Gene3D G3DSA:3.30.930.10 4 222 2.2E-108 T 14-10-2018 XF_1960 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 120 144 3.6E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1960 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 68 83 3.6E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1960 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 259 275 3.6E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1960 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 89 109 3.6E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1960 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 146 166 3.6E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1960 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 169 184 3.6E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1960 b64cde8c88e6395e5d1ba6343fc9599c 307 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 16 298 9.1E-147 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1960 b64cde8c88e6395e5d1ba6343fc9599c 307 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 15 305 4.4E-157 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1960 b64cde8c88e6395e5d1ba6343fc9599c 307 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 14 299 59.027 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1960 b64cde8c88e6395e5d1ba6343fc9599c 307 Gene3D G3DSA:1.20.58.180 223 304 8.7E-32 T 14-10-2018 XF_1960 b64cde8c88e6395e5d1ba6343fc9599c 307 SUPERFAMILY SSF55681 15 298 1.74E-129 T 14-10-2018 XF_0999 8773e8e79a8326282419a18fb780ed4c 401 SUPERFAMILY SSF52402 3 185 7.72E-34 T 14-10-2018 XF_0999 8773e8e79a8326282419a18fb780ed4c 401 Pfam PF00764 Arginosuccinate synthase 7 392 1.2E-84 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XF_0999 8773e8e79a8326282419a18fb780ed4c 401 SUPERFAMILY SSF69864 174 398 1.15E-58 T 14-10-2018 XF_0999 8773e8e79a8326282419a18fb780ed4c 401 Gene3D G3DSA:3.90.1260.10 65 352 4.5E-103 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XF_0999 8773e8e79a8326282419a18fb780ed4c 401 Gene3D G3DSA:3.40.50.620 6 174 4.5E-103 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0999 8773e8e79a8326282419a18fb780ed4c 401 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 397 38.335 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XF_0999 8773e8e79a8326282419a18fb780ed4c 401 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 395 2.7E-83 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XF_0999 8773e8e79a8326282419a18fb780ed4c 401 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XF_0999 8773e8e79a8326282419a18fb780ed4c 401 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XF_1106 151de11760426ad1de3d2681edc9cf15 399 SMART SM01097 28 158 6.1E-88 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1106 151de11760426ad1de3d2681edc9cf15 399 Gene3D G3DSA:3.40.50.880 176 397 6.5E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_1106 151de11760426ad1de3d2681edc9cf15 399 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 30 156 3.1E-51 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1106 151de11760426ad1de3d2681edc9cf15 399 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 28 399 47.348 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1106 151de11760426ad1de3d2681edc9cf15 399 SUPERFAMILY SSF52021 29 173 1.03E-55 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1106 151de11760426ad1de3d2681edc9cf15 399 PRINTS PR00096 Glutamine amidotransferase superfamily signature 370 383 3.9E-11 T 14-10-2018 XF_1106 151de11760426ad1de3d2681edc9cf15 399 PRINTS PR00096 Glutamine amidotransferase superfamily signature 285 296 3.9E-11 T 14-10-2018 XF_1106 151de11760426ad1de3d2681edc9cf15 399 PRINTS PR00096 Glutamine amidotransferase superfamily signature 257 266 3.9E-11 T 14-10-2018 XF_1106 151de11760426ad1de3d2681edc9cf15 399 SUPERFAMILY SSF52317 178 397 4.43E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_1106 151de11760426ad1de3d2681edc9cf15 399 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 254 268 3.1E-37 T 14-10-2018 XF_1106 151de11760426ad1de3d2681edc9cf15 399 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 302 319 3.1E-37 T 14-10-2018 XF_1106 151de11760426ad1de3d2681edc9cf15 399 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 215 229 3.1E-37 T 14-10-2018 XF_1106 151de11760426ad1de3d2681edc9cf15 399 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 285 301 3.1E-37 T 14-10-2018 XF_1106 151de11760426ad1de3d2681edc9cf15 399 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 327 338 3.1E-37 T 14-10-2018 XF_1106 151de11760426ad1de3d2681edc9cf15 399 Gene3D G3DSA:3.50.30.20 27 175 1.3E-57 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_1106 151de11760426ad1de3d2681edc9cf15 399 Pfam PF00117 Glutamine amidotransferase class-I 218 393 9.9E-45 T 14-10-2018 IPR017926 Glutamine amidotransferase XF_1106 151de11760426ad1de3d2681edc9cf15 399 PRINTS PR00097 Anthranilate synthase component II signature 370 383 1.3E-5 T 14-10-2018 XF_1106 151de11760426ad1de3d2681edc9cf15 399 PRINTS PR00097 Anthranilate synthase component II signature 257 266 1.3E-5 T 14-10-2018 XF_1106 151de11760426ad1de3d2681edc9cf15 399 PRINTS PR00097 Anthranilate synthase component II signature 285 296 1.3E-5 T 14-10-2018 XF_1106 151de11760426ad1de3d2681edc9cf15 399 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 30 396 4.2E-143 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XF_2023 19abf527cb9a245cc63ea4feebc09a0e 237 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 14 234 4.6E-71 T 14-10-2018 IPR012808 Conserved hypothetical protein CHP02453 XF_2023 19abf527cb9a245cc63ea4feebc09a0e 237 Pfam PF09365 Conserved hypothetical protein (DUF2461) 17 228 1.4E-54 T 14-10-2018 IPR012808 Conserved hypothetical protein CHP02453 XF_2023 19abf527cb9a245cc63ea4feebc09a0e 237 PIRSF PIRSF028451 10 237 6.2E-95 T 14-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 XF_2575 f50ce33a3b9503c6419e5507e8be9c15 417 Gene3D G3DSA:3.30.413.10 299 415 4.6E-36 T 14-10-2018 XF_2575 f50ce33a3b9503c6419e5507e8be9c15 417 PIRSF PIRSF004640 8 414 1.0E-121 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XF_2575 f50ce33a3b9503c6419e5507e8be9c15 417 Pfam PF04551 GcpE protein 18 405 2.4E-106 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XF_2575 f50ce33a3b9503c6419e5507e8be9c15 417 SUPERFAMILY SSF56014 304 409 3.53E-5 T 14-10-2018 XF_2575 f50ce33a3b9503c6419e5507e8be9c15 417 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 15 404 1.1E-113 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XF_2575 f50ce33a3b9503c6419e5507e8be9c15 417 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 13 407 28.35 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XF_2575 f50ce33a3b9503c6419e5507e8be9c15 417 Gene3D G3DSA:3.20.20.20 13 298 3.7E-93 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XF_1453 7f57b6ab770949db685efdb68294175f 429 Gene3D G3DSA:1.20.272.10 219 323 7.2E-40 T 14-10-2018 XF_1453 7f57b6ab770949db685efdb68294175f 429 Gene3D G3DSA:1.10.8.60 146 218 7.2E-18 T 14-10-2018 XF_1453 7f57b6ab770949db685efdb68294175f 429 Gene3D G3DSA:1.10.3710.10 324 425 1.3E-31 T 14-10-2018 XF_1453 7f57b6ab770949db685efdb68294175f 429 SMART SM00382 30 146 2.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1453 7f57b6ab770949db685efdb68294175f 429 Pfam PF16193 AAA C-terminal domain 168 245 2.2E-22 T 14-10-2018 IPR032423 AAA C-terminal domain XF_1453 7f57b6ab770949db685efdb68294175f 429 SUPERFAMILY SSF48019 230 412 7.37E-70 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 XF_1453 7f57b6ab770949db685efdb68294175f 429 SUPERFAMILY SSF52540 1 208 4.35E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1453 7f57b6ab770949db685efdb68294175f 429 Pfam PF12002 MgsA AAA+ ATPase C terminal 247 412 4.0E-62 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal XF_1453 7f57b6ab770949db685efdb68294175f 429 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 34 142 3.7E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XF_1453 7f57b6ab770949db685efdb68294175f 429 Gene3D G3DSA:3.40.50.300 1 144 3.1E-40 T 14-10-2018 XF_1029 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 SMART SM00939 365 629 1.7E-84 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 XF_1029 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 49 634 2.8E-72 T 14-10-2018 IPR005674 CocE/Serine esterase GO:0016787 XF_1029 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 SUPERFAMILY SSF49785 407 633 1.87E-73 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily XF_1029 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 Gene3D G3DSA:1.10.3020.10 208 283 6.8E-125 T 14-10-2018 XF_1029 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 379 628 1.5E-37 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 XF_1029 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 Gene3D G3DSA:2.60.120.260 394 632 7.4E-77 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily XF_1029 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 Gene3D G3DSA:3.40.50.1820 43 393 6.8E-125 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1029 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 52 338 4.1E-72 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 XF_1029 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 SUPERFAMILY SSF53474 36 400 9.66E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0649 d8565d5d511c3522a80d991f19543259 224 SMART SM01160 53 142 0.0019 T 14-10-2018 XF_0649 d8565d5d511c3522a80d991f19543259 224 Pfam PF01694 Rhomboid family 56 205 1.5E-37 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 XF_0649 d8565d5d511c3522a80d991f19543259 224 SUPERFAMILY SSF144091 8 205 6.28E-42 T 14-10-2018 XF_0649 d8565d5d511c3522a80d991f19543259 224 Gene3D G3DSA:1.20.1540.10 4 204 2.2E-33 T 14-10-2018 IPR035952 Rhomboid-like superfamily XF_1406 0eefd1adc7f71fc0876c4526280cbb35 316 SUPERFAMILY SSF53795 137 306 1.62E-32 T 14-10-2018 XF_1406 0eefd1adc7f71fc0876c4526280cbb35 316 Pfam PF02603 HPr Serine kinase N terminus 5 132 7.0E-25 T 14-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 XF_1406 0eefd1adc7f71fc0876c4526280cbb35 316 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 309 4.8E-101 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 XF_1406 0eefd1adc7f71fc0876c4526280cbb35 316 SUPERFAMILY SSF75138 11 136 4.32E-31 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily XF_1406 0eefd1adc7f71fc0876c4526280cbb35 316 Gene3D G3DSA:3.40.1390.20 12 134 1.7E-26 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily XF_1406 0eefd1adc7f71fc0876c4526280cbb35 316 Gene3D G3DSA:3.40.50.300 135 315 8.1E-61 T 14-10-2018 XF_1406 0eefd1adc7f71fc0876c4526280cbb35 316 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 4 314 35.898 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 XF_1406 0eefd1adc7f71fc0876c4526280cbb35 316 Pfam PF07475 HPr Serine kinase C-terminal domain 136 306 9.8E-57 T 14-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 XF_0421 9be31739a7c6f2bbb8d587cc6ad22ae1 264 SUPERFAMILY SSF52540 6 234 7.82E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0421 9be31739a7c6f2bbb8d587cc6ad22ae1 264 Pfam PF00005 ABC transporter 23 170 2.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_0421 9be31739a7c6f2bbb8d587cc6ad22ae1 264 Gene3D G3DSA:3.40.50.300 2 244 1.6E-58 T 14-10-2018 XF_0421 9be31739a7c6f2bbb8d587cc6ad22ae1 264 SMART SM00382 32 247 1.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_0421 9be31739a7c6f2bbb8d587cc6ad22ae1 264 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_0121 a469725ccfce0ba0b4864beb715b3e47 343 SUPERFAMILY SSF51412 10 314 4.43E-43 T 14-10-2018 XF_0121 a469725ccfce0ba0b4864beb715b3e47 343 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 210 230 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 XF_0121 a469725ccfce0ba0b4864beb715b3e47 343 Gene3D G3DSA:3.20.20.70 6 343 1.8E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_0121 a469725ccfce0ba0b4864beb715b3e47 343 Pfam PF03060 Nitronate monooxygenase 12 339 2.0E-66 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 XF_2389 2991f726b49c73ba39e6a54d4d251ef3 349 SUPERFAMILY SSF50129 8 171 4.72E-47 T 14-10-2018 IPR011032 GroES-like superfamily XF_2389 2991f726b49c73ba39e6a54d4d251ef3 349 SUPERFAMILY SSF51735 151 312 1.18E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2389 2991f726b49c73ba39e6a54d4d251ef3 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XF_2389 2991f726b49c73ba39e6a54d4d251ef3 349 Gene3D G3DSA:3.90.180.10 13 342 1.6E-131 T 14-10-2018 XF_2389 2991f726b49c73ba39e6a54d4d251ef3 349 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 178 205 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XF_2389 2991f726b49c73ba39e6a54d4d251ef3 349 Pfam PF00107 Zinc-binding dehydrogenase 185 308 9.1E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XF_2389 2991f726b49c73ba39e6a54d4d251ef3 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 142 1.3E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XF_2389 2991f726b49c73ba39e6a54d4d251ef3 349 Gene3D G3DSA:3.40.50.720 159 314 1.6E-131 T 14-10-2018 XF_2389 2991f726b49c73ba39e6a54d4d251ef3 349 SMART SM00829 13 342 3.8E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XF_0317 93ed67134c4fbb418047a01cbec96ad8 501 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 495 1.1E-191 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0317 93ed67134c4fbb418047a01cbec96ad8 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 9.2E-40 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0317 93ed67134c4fbb418047a01cbec96ad8 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 386 412 9.2E-40 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0317 93ed67134c4fbb418047a01cbec96ad8 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 9.2E-40 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0317 93ed67134c4fbb418047a01cbec96ad8 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 135 154 9.2E-40 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0317 93ed67134c4fbb418047a01cbec96ad8 501 Pfam PF00361 Proton-conducting membrane transporter 129 429 7.8E-78 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_2038 509db2aa857ee64c9458328cec01d212 216 Pfam PF04299 Putative FMN-binding domain 3 169 3.8E-46 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type XF_2038 509db2aa857ee64c9458328cec01d212 216 SUPERFAMILY SSF50475 14 195 6.28E-27 T 14-10-2018 XF_2038 509db2aa857ee64c9458328cec01d212 216 Gene3D G3DSA:2.30.110.10 2 210 1.4E-54 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 XF_2038 509db2aa857ee64c9458328cec01d212 216 PIRSF PIRSF010372 2 211 3.1E-50 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type XF_2578 97817cede122663c9ab8660c1d63e9b4 192 Gene3D G3DSA:1.10.10.60 127 183 4.1E-20 T 14-10-2018 XF_2578 97817cede122663c9ab8660c1d63e9b4 192 SMART SM00448 6 118 2.4E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2578 97817cede122663c9ab8660c1d63e9b4 192 Pfam PF02954 Bacterial regulatory protein, Fis family 147 180 3.0E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XF_2578 97817cede122663c9ab8660c1d63e9b4 192 Pfam PF00072 Response regulator receiver domain 10 118 1.5E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2578 97817cede122663c9ab8660c1d63e9b4 192 Gene3D G3DSA:3.40.50.2300 5 124 3.7E-25 T 14-10-2018 XF_2578 97817cede122663c9ab8660c1d63e9b4 192 SUPERFAMILY SSF52172 10 122 2.56E-27 T 14-10-2018 IPR011006 CheY-like superfamily XF_2578 97817cede122663c9ab8660c1d63e9b4 192 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 147 164 1.3E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XF_2578 97817cede122663c9ab8660c1d63e9b4 192 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 164 184 1.3E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XF_2578 97817cede122663c9ab8660c1d63e9b4 192 SUPERFAMILY SSF46689 135 180 5.82E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XF_0882 2547cdd9faa65690b12e9501eb6ed001 708 Gene3D G3DSA:3.40.50.300 59 323 1.5E-42 T 14-10-2018 XF_0882 2547cdd9faa65690b12e9501eb6ed001 708 Pfam PF13307 Helicase C-terminal domain 510 665 1.5E-30 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 XF_0882 2547cdd9faa65690b12e9501eb6ed001 708 SMART SM00491 525 653 1.3E-33 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 XF_0882 2547cdd9faa65690b12e9501eb6ed001 708 Gene3D G3DSA:3.40.50.300 501 685 1.7E-31 T 14-10-2018 XF_0882 2547cdd9faa65690b12e9501eb6ed001 708 SUPERFAMILY SSF52540 53 649 1.33E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1842 6f110248517f76004833b4eefe1b7ead 504 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 294 309 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 XF_1842 6f110248517f76004833b4eefe1b7ead 504 SMART SM01230 137 414 2.3E-136 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XF_1842 6f110248517f76004833b4eefe1b7ead 504 ProSitePatterns PS00180 Glutamine synthetase signature 1. 85 103 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 XF_1842 6f110248517f76004833b4eefe1b7ead 504 Gene3D G3DSA:3.10.20.70 37 139 1.2E-37 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XF_1842 6f110248517f76004833b4eefe1b7ead 504 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 39 502 9.2E-193 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XF_1842 6f110248517f76004833b4eefe1b7ead 504 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 49 130 2.0E-29 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 XF_1842 6f110248517f76004833b4eefe1b7ead 504 Gene3D G3DSA:3.30.590.10 140 492 1.3E-138 T 14-10-2018 XF_1842 6f110248517f76004833b4eefe1b7ead 504 SUPERFAMILY SSF55931 138 502 7.16E-130 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 XF_1842 6f110248517f76004833b4eefe1b7ead 504 SUPERFAMILY SSF54368 38 135 5.23E-36 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XF_1842 6f110248517f76004833b4eefe1b7ead 504 Pfam PF00120 Glutamine synthetase, catalytic domain 138 501 1.4E-131 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XF_0839 c5139a972ea7d2678663d6fe11572ca9 330 Gene3D G3DSA:3.40.718.10 2 324 9.3E-109 T 14-10-2018 XF_0839 c5139a972ea7d2678663d6fe11572ca9 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 323 34.978 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 XF_0839 c5139a972ea7d2678663d6fe11572ca9 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 315 6.7E-98 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 XF_0839 c5139a972ea7d2678663d6fe11572ca9 330 SUPERFAMILY SSF53659 4 323 1.17E-99 T 14-10-2018 XF_0839 c5139a972ea7d2678663d6fe11572ca9 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 319 1.3E-113 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 SUPERFAMILY SSF82693 136 322 2.62E-15 T 14-10-2018 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 SUPERFAMILY SSF82714 710 796 2.49E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:3.30.2090.10 709 798 1.0E-235 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:3.30.70.1440 658 855 1.0E-235 T 14-10-2018 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 SUPERFAMILY SSF82693 42 132 3.66E-14 T 14-10-2018 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 3.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 3.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 3.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 3.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 SUPERFAMILY SSF82714 182 264 9.81E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:1.20.1640.10 13 504 1.0E-235 T 14-10-2018 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 SUPERFAMILY SSF82866 292 491 3.53E-39 T 14-10-2018 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:3.30.70.1320 134 328 1.0E-235 T 14-10-2018 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:3.30.70.1430 556 657 1.0E-235 T 14-10-2018 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 SUPERFAMILY SSF82866 796 1016 1.29E-47 T 14-10-2018 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:3.30.2090.10 177 270 1.0E-235 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 Pfam PF00873 AcrB/AcrD/AcrF family 12 1011 2.1E-160 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:3.30.70.1430 40 806 1.0E-235 T 14-10-2018 XF_0243 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:1.20.1640.10 505 1009 1.0E-235 T 14-10-2018 XF_0048 fbf54f1fffdf625924353819064f8c03 161 Gene3D G3DSA:2.40.50.100 84 160 7.8E-30 T 14-10-2018 XF_0048 fbf54f1fffdf625924353819064f8c03 161 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 161 1.1E-49 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XF_0048 fbf54f1fffdf625924353819064f8c03 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 107 121 9.5E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XF_0048 fbf54f1fffdf625924353819064f8c03 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 122 135 9.5E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XF_0048 fbf54f1fffdf625924353819064f8c03 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 90 103 9.5E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XF_0048 fbf54f1fffdf625924353819064f8c03 161 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 117 134 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XF_0048 fbf54f1fffdf625924353819064f8c03 161 Pfam PF00364 Biotin-requiring enzyme 87 160 8.3E-23 T 14-10-2018 IPR000089 Biotin/lipoyl attachment XF_0048 fbf54f1fffdf625924353819064f8c03 161 SUPERFAMILY SSF51230 86 160 4.32E-24 T 14-10-2018 IPR011053 Single hybrid motif XF_0425 0fdff9fc0e0700bcfbad849669e08d7b 639 Pfam PF13245 AAA domain 157 313 4.6E-30 T 14-10-2018 XF_0425 0fdff9fc0e0700bcfbad849669e08d7b 639 Gene3D G3DSA:3.40.50.300 111 353 9.1E-58 T 14-10-2018 XF_0425 0fdff9fc0e0700bcfbad849669e08d7b 639 SUPERFAMILY SSF52540 5 323 2.39E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0425 0fdff9fc0e0700bcfbad849669e08d7b 639 Gene3D G3DSA:1.10.10.1020 1 110 1.4E-5 T 14-10-2018 XF_0425 0fdff9fc0e0700bcfbad849669e08d7b 639 Gene3D G3DSA:3.40.50.300 380 480 2.8E-6 T 14-10-2018 XF_0425 0fdff9fc0e0700bcfbad849669e08d7b 639 Gene3D G3DSA:3.40.50.300 487 599 1.3E-23 T 14-10-2018 XF_0425 0fdff9fc0e0700bcfbad849669e08d7b 639 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 13 608 45.017 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 XF_0425 0fdff9fc0e0700bcfbad849669e08d7b 639 Pfam PF13538 UvrD-like helicase C-terminal domain 539 585 2.7E-14 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain XF_0425 0fdff9fc0e0700bcfbad849669e08d7b 639 SUPERFAMILY SSF52540 290 609 3.36E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0425 0fdff9fc0e0700bcfbad849669e08d7b 639 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 4 610 6.2E-200 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 XF_2372 e6efe687b509358ea7f473bc71dc1bba 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 50.854 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 XF_2372 e6efe687b509358ea7f473bc71dc1bba 357 Gene3D G3DSA:3.40.718.10 1 357 5.8E-145 T 14-10-2018 XF_2372 e6efe687b509358ea7f473bc71dc1bba 357 SUPERFAMILY SSF53659 1 357 1.28E-119 T 14-10-2018 XF_2372 e6efe687b509358ea7f473bc71dc1bba 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 8.8E-152 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 XF_2372 e6efe687b509358ea7f473bc71dc1bba 357 SMART SM01329 4 353 1.8E-197 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XF_2372 e6efe687b509358ea7f473bc71dc1bba 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 XF_2372 e6efe687b509358ea7f473bc71dc1bba 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 353 1.9E-130 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XF_0212 86b7a92bced90d68af3350770abd6b6b 344 Gene3D G3DSA:1.20.970.10 1 72 1.4E-28 T 14-10-2018 XF_0212 86b7a92bced90d68af3350770abd6b6b 344 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 336 4.1E-123 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 XF_0212 86b7a92bced90d68af3350770abd6b6b 344 SUPERFAMILY SSF52418 78 339 3.66E-94 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XF_0212 86b7a92bced90d68af3350770abd6b6b 344 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 36.78 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 XF_0212 86b7a92bced90d68af3350770abd6b6b 344 Pfam PF00591 Glycosyl transferase family, a/b domain 77 327 8.1E-90 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 XF_0212 86b7a92bced90d68af3350770abd6b6b 344 SUPERFAMILY SSF47648 3 71 5.49E-16 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XF_0212 86b7a92bced90d68af3350770abd6b6b 344 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 68 7.5E-11 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 XF_0212 86b7a92bced90d68af3350770abd6b6b 344 Gene3D G3DSA:3.40.1030.10 73 341 3.1E-105 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XF_1298 4a0926922d553f397080371eeacacb88 548 SUPERFAMILY SSF51905 13 389 1.82E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1298 4a0926922d553f397080371eeacacb88 548 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 447 546 6.9E-43 T 14-10-2018 XF_1298 4a0926922d553f397080371eeacacb88 548 Gene3D G3DSA:3.30.9.90 87 434 1.4E-159 T 14-10-2018 XF_1298 4a0926922d553f397080371eeacacb88 548 SUPERFAMILY SSF54373 216 310 3.02E-30 T 14-10-2018 XF_1298 4a0926922d553f397080371eeacacb88 548 Gene3D G3DSA:3.50.50.60 19 384 1.4E-159 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1298 4a0926922d553f397080371eeacacb88 548 Pfam PF01946 Thi4 family 16 63 1.0E-6 T 14-10-2018 XF_1298 4a0926922d553f397080371eeacacb88 548 SUPERFAMILY SSF54862 448 547 4.49E-24 T 14-10-2018 XF_1298 4a0926922d553f397080371eeacacb88 548 Gene3D G3DSA:3.30.70.20 447 543 3.2E-34 T 14-10-2018 XF_1953 66ec6d3109499ebc22b88983a69c048d 693 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 450 479 1.3E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XF_1953 66ec6d3109499ebc22b88983a69c048d 693 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 527 554 1.3E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XF_1953 66ec6d3109499ebc22b88983a69c048d 693 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 556 585 1.3E-18 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XF_1953 66ec6d3109499ebc22b88983a69c048d 693 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 657 1.1E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 XF_1953 66ec6d3109499ebc22b88983a69c048d 693 SUPERFAMILY SSF58104 392 691 1.05E-64 T 14-10-2018 XF_1953 66ec6d3109499ebc22b88983a69c048d 693 SMART SM00283 429 690 1.1E-82 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 XF_1953 66ec6d3109499ebc22b88983a69c048d 693 Gene3D G3DSA:1.10.287.950 365 692 6.2E-59 T 14-10-2018 XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 Gene3D G3DSA:3.40.50.880 1013 1322 7.8E-121 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 Gene3D G3DSA:3.30.1330.10 206 411 6.8E-39 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 SUPERFAMILY SSF56042 421 679 9.42E-49 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 SMART SM01211 1070 1321 3.5E-138 T 14-10-2018 XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 Gene3D G3DSA:1.10.8.750 151 205 2.6E-19 T 14-10-2018 XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1321 0.0 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 SUPERFAMILY SSF55326 643 840 2.88E-62 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1322 19.827 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1070 1321 2.7E-96 T 14-10-2018 XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 Pfam PF02769 AIR synthase related protein, C-terminal domain 889 982 2.0E-7 T 14-10-2018 IPR010918 PurM-like, C-terminal domain XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 Pfam PF02769 AIR synthase related protein, C-terminal domain 421 578 6.1E-32 T 14-10-2018 IPR010918 PurM-like, C-terminal domain XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 SUPERFAMILY SSF56042 847 1063 1.29E-46 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 Gene3D G3DSA:3.90.650.10 412 592 1.2E-51 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 Gene3D G3DSA:3.90.650.10 832 1012 5.4E-27 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 Gene3D G3DSA:3.30.1330.10 648 831 2.0E-22 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 SUPERFAMILY SSF55326 213 416 5.23E-48 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 SUPERFAMILY SSF109736 161 212 3.14E-17 T 14-10-2018 XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 SUPERFAMILY SSF52317 1067 1321 1.15E-89 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_1423 ed5b8900b0d17eb0870bdf5b5557929f 1322 SUPERFAMILY SSF82697 1 148 5.75E-33 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XF_0029 1621b80ef719e5f8b04dca9bf3e27206 158 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 10 129 3.2E-18 T 14-10-2018 IPR013362 Pilus modification type IV, PilV XF_0029 1621b80ef719e5f8b04dca9bf3e27206 158 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 31 6.9E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_1641 6ea253ec5c942d000643cb19bf07f5c5 863 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 544 831 9.6E-89 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal XF_1641 6ea253ec5c942d000643cb19bf07f5c5 863 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 23 304 4.9E-10 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD XF_1641 6ea253ec5c942d000643cb19bf07f5c5 863 SUPERFAMILY SSF55729 647 829 3.71E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase XF_1341 1a904e60793045bc3372177323251a3b 267 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 26 228 29.014 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 XF_1341 1a904e60793045bc3372177323251a3b 267 Pfam PF03932 CutC family 28 226 6.4E-86 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 XF_1341 1a904e60793045bc3372177323251a3b 267 SUPERFAMILY SSF110395 28 263 1.11E-66 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 XF_1341 1a904e60793045bc3372177323251a3b 267 Gene3D G3DSA:3.20.20.380 26 265 9.2E-79 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 XF_0375 39f548fcaf978d0d79ac591418ea4abe 552 Pfam PF08019 Domain of unknown function (DUF1705) 69 217 5.2E-45 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 XF_0375 39f548fcaf978d0d79ac591418ea4abe 552 SUPERFAMILY SSF53649 244 536 1.74E-15 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 XF_0375 39f548fcaf978d0d79ac591418ea4abe 552 Pfam PF00884 Sulfatase 247 534 3.1E-52 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 XF_0375 39f548fcaf978d0d79ac591418ea4abe 552 Gene3D G3DSA:3.40.720.10 231 552 1.1E-80 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XF_1250 288f0168801ffd2bd3072f63115fedac 293 Pfam PF00491 Arginase family 67 223 1.2E-13 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 XF_1250 288f0168801ffd2bd3072f63115fedac 293 Gene3D G3DSA:3.40.800.10 28 286 3.3E-28 T 14-10-2018 XF_1250 288f0168801ffd2bd3072f63115fedac 293 SUPERFAMILY SSF52768 8 284 1.46E-39 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily XF_0241 3a4408ae49794ada4ed273b7a3dc0bcd 293 SUPERFAMILY SSF51735 6 256 8.86E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0241 3a4408ae49794ada4ed273b7a3dc0bcd 293 Gene3D G3DSA:3.40.50.720 9 274 9.4E-81 T 14-10-2018 XF_0241 3a4408ae49794ada4ed273b7a3dc0bcd 293 Gene3D G3DSA:3.90.25.10 143 276 9.4E-81 T 14-10-2018 XF_0241 3a4408ae49794ada4ed273b7a3dc0bcd 293 Pfam PF05368 NmrA-like family 8 227 1.1E-18 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 XF_1403 e69bb8ad949323dc1c2f2495e71b64ba 95 PRINTS PR00107 Phosphocarrier protein signature 59 76 3.8E-17 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like XF_1403 e69bb8ad949323dc1c2f2495e71b64ba 95 PRINTS PR00107 Phosphocarrier protein signature 19 35 3.8E-17 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like XF_1403 e69bb8ad949323dc1c2f2495e71b64ba 95 PRINTS PR00107 Phosphocarrier protein signature 44 59 3.8E-17 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like XF_1403 e69bb8ad949323dc1c2f2495e71b64ba 95 Gene3D G3DSA:3.30.1340.10 7 94 1.1E-30 T 14-10-2018 IPR035895 HPr-like superfamily XF_1403 e69bb8ad949323dc1c2f2495e71b64ba 95 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 7 88 2.2E-33 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like XF_1403 e69bb8ad949323dc1c2f2495e71b64ba 95 SUPERFAMILY SSF55594 7 94 3.93E-28 T 14-10-2018 IPR035895 HPr-like superfamily XF_1403 e69bb8ad949323dc1c2f2495e71b64ba 95 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 19 26 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site XF_1403 e69bb8ad949323dc1c2f2495e71b64ba 95 Pfam PF00381 PTS HPr component phosphorylation site 9 88 9.8E-28 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like XF_1403 e69bb8ad949323dc1c2f2495e71b64ba 95 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 45 60 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site XF_2685 c2daf2db7038e3216756b12ae0a2511f 633 Gene3D G3DSA:3.90.226.10 98 326 3.4E-152 T 14-10-2018 XF_2685 c2daf2db7038e3216756b12ae0a2511f 633 Gene3D G3DSA:3.90.226.10 327 550 3.4E-152 T 14-10-2018 XF_2685 c2daf2db7038e3216756b12ae0a2511f 633 PIRSF PIRSF001217 10 633 6.7E-196 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 XF_2685 c2daf2db7038e3216756b12ae0a2511f 633 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 19 580 3.1E-156 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 XF_2685 c2daf2db7038e3216756b12ae0a2511f 633 Pfam PF01343 Peptidase family S49 143 297 3.7E-23 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 XF_2685 c2daf2db7038e3216756b12ae0a2511f 633 Pfam PF01343 Peptidase family S49 400 551 9.2E-48 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 XF_2685 c2daf2db7038e3216756b12ae0a2511f 633 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 358 549 2.8E-52 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 XF_2685 c2daf2db7038e3216756b12ae0a2511f 633 Gene3D G3DSA:3.40.1750.10 189 507 3.4E-152 T 14-10-2018 XF_2685 c2daf2db7038e3216756b12ae0a2511f 633 SUPERFAMILY SSF52096 331 537 1.25E-38 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XF_2685 c2daf2db7038e3216756b12ae0a2511f 633 SUPERFAMILY SSF52096 39 290 1.62E-18 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XF_2482 d50165d6f458de14d7203bc182d97da6 739 Pfam PF10145 Phage-related minor tail protein 162 373 6.1E-32 T 14-10-2018 IPR010090 Phage tail tape measure protein XF_2482 d50165d6f458de14d7203bc182d97da6 739 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 117 480 1.2E-64 T 14-10-2018 IPR010090 Phage tail tape measure protein XF_0651 01e52854270a8136c827bcd388129a9e 430 Pfam PF04235 Protein of unknown function (DUF418) 262 418 2.4E-42 T 14-10-2018 IPR007349 Domain of unknown function DUF418 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 SUPERFAMILY SSF50621 231 360 3.49E-42 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 Gene3D G3DSA:3.20.20.10 13 219 1.6E-123 T 14-10-2018 IPR029066 PLP-binding barrel XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 Gene3D G3DSA:2.40.37.10 11 356 1.6E-123 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 Hamap MF_01201 Alanine racemase. 4 359 33.524 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 PRINTS PR00992 Alanine racemase signature 63 81 3.8E-57 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 PRINTS PR00992 Alanine racemase signature 252 267 3.8E-57 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 PRINTS PR00992 Alanine racemase signature 157 168 3.8E-57 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 PRINTS PR00992 Alanine racemase signature 194 221 3.8E-57 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 PRINTS PR00992 Alanine racemase signature 269 284 3.8E-57 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 PRINTS PR00992 Alanine racemase signature 28 44 3.8E-57 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 PRINTS PR00992 Alanine racemase signature 123 135 3.8E-57 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 PRINTS PR00992 Alanine racemase signature 290 307 3.8E-57 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 SMART SM01005 236 359 2.6E-57 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 TIGRFAM TIGR00492 alr: alanine racemase 6 359 1.2E-102 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 Pfam PF00842 Alanine racemase, C-terminal domain 236 358 1.6E-36 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 33 43 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 SUPERFAMILY SSF51419 11 237 1.57E-70 T 14-10-2018 IPR029066 PLP-binding barrel XF_0852 6ef594b162f1822b4e07f9a718d1679b 365 Pfam PF01168 Alanine racemase, N-terminal domain 11 221 1.7E-69 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XF_1371 68b063acc8d074f56f836090bd77c68c 344 SUPERFAMILY SSF51735 10 163 1.63E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1371 68b063acc8d074f56f836090bd77c68c 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 326 2.3E-57 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XF_1371 68b063acc8d074f56f836090bd77c68c 344 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 11 340 2.7E-139 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XF_1371 68b063acc8d074f56f836090bd77c68c 344 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 9 340 37.003 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XF_1371 68b063acc8d074f56f836090bd77c68c 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 11 125 1.4E-32 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XF_1371 68b063acc8d074f56f836090bd77c68c 344 Gene3D G3DSA:3.40.50.720 12 338 4.6E-146 T 14-10-2018 XF_1371 68b063acc8d074f56f836090bd77c68c 344 PIRSF PIRSF000148 9 344 1.3E-129 T 14-10-2018 XF_1371 68b063acc8d074f56f836090bd77c68c 344 Gene3D G3DSA:3.30.360.10 136 322 4.6E-146 T 14-10-2018 XF_1371 68b063acc8d074f56f836090bd77c68c 344 SUPERFAMILY SSF55347 135 327 2.38E-73 T 14-10-2018 XF_1371 68b063acc8d074f56f836090bd77c68c 344 SMART SM00859 11 126 2.8E-45 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XF_0755 ad5a14bf3b7244b53bcac27dd099fc5f 444 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 5 440 31.144 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 XF_0755 ad5a14bf3b7244b53bcac27dd099fc5f 444 Pfam PF13742 OB-fold nucleic acid binding domain 11 100 6.2E-26 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 XF_0755 ad5a14bf3b7244b53bcac27dd099fc5f 444 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 355 1.7E-125 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 XF_0755 ad5a14bf3b7244b53bcac27dd099fc5f 444 Pfam PF02601 Exonuclease VII, large subunit 124 437 2.5E-93 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 XF_2662 45ff5ed3db116025e84128c4393df4b7 119 SUPERFAMILY SSF52540 3 74 1.36E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2662 45ff5ed3db116025e84128c4393df4b7 119 Gene3D G3DSA:3.40.50.300 1 109 6.6E-8 T 14-10-2018 XF_1465 3baa805c0b6543da60f709368068216c 386 PIRSF PIRSF038994 9 385 3.5E-113 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 XF_1465 3baa805c0b6543da60f709368068216c 386 Gene3D G3DSA:3.20.20.140 64 351 3.7E-125 T 14-10-2018 XF_1465 3baa805c0b6543da60f709368068216c 386 SUPERFAMILY SSF51556 63 357 5.58E-99 T 14-10-2018 IPR032466 Metal-dependent hydrolase XF_1465 3baa805c0b6543da60f709368068216c 386 Pfam PF01979 Amidohydrolase family 60 383 2.1E-28 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 XF_1465 3baa805c0b6543da60f709368068216c 386 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 11 383 1.2E-99 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 XF_1465 3baa805c0b6543da60f709368068216c 386 Gene3D G3DSA:2.30.40.10 15 383 3.7E-125 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XF_1465 3baa805c0b6543da60f709368068216c 386 SUPERFAMILY SSF51338 11 383 5.89E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XF_1569 98ac3f028c416edafffb47d939bb3be2 316 Gene3D G3DSA:3.40.50.300 1 205 2.8E-6 T 14-10-2018 XF_1674 98ac3f028c416edafffb47d939bb3be2 316 Gene3D G3DSA:3.40.50.300 1 205 2.8E-6 T 14-10-2018 XF_1818 67c0591984c2098ceac94bcc9d53fc95 519 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 206 219 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XF_1818 67c0591984c2098ceac94bcc9d53fc95 519 SUPERFAMILY SSF51569 8 298 3.91E-94 T 14-10-2018 XF_1818 67c0591984c2098ceac94bcc9d53fc95 519 Pfam PF00682 HMGL-like 11 279 4.3E-89 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 XF_1818 67c0591984c2098ceac94bcc9d53fc95 519 SMART SM00917 376 504 2.0E-26 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XF_1818 67c0591984c2098ceac94bcc9d53fc95 519 SUPERFAMILY SSF110921 405 503 3.4E-21 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XF_1818 67c0591984c2098ceac94bcc9d53fc95 519 Pfam PF08502 LeuA allosteric (dimerisation) domain 377 504 5.5E-29 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XF_1818 67c0591984c2098ceac94bcc9d53fc95 519 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 9 513 39.643 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XF_1818 67c0591984c2098ceac94bcc9d53fc95 519 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XF_1818 67c0591984c2098ceac94bcc9d53fc95 519 Gene3D G3DSA:3.30.160.270 400 505 1.6E-10 T 14-10-2018 XF_1818 67c0591984c2098ceac94bcc9d53fc95 519 Gene3D G3DSA:1.10.238.260 287 399 6.2E-35 T 14-10-2018 XF_1818 67c0591984c2098ceac94bcc9d53fc95 519 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 11 501 2.2E-193 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XF_1818 67c0591984c2098ceac94bcc9d53fc95 519 Gene3D G3DSA:3.20.20.70 9 283 1.5E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_1710 994ca683a2f4e1b44d6e62740fc6df6b 110 SUPERFAMILY SSF47413 54 102 1.66E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_1710 994ca683a2f4e1b44d6e62740fc6df6b 110 Gene3D G3DSA:1.10.260.40 29 108 6.9E-13 T 14-10-2018 XF_1710 994ca683a2f4e1b44d6e62740fc6df6b 110 SMART SM00530 56 109 0.0082 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_2260 2412d3d0d234c37609f6b944a9e68e44 709 Pfam PF07676 WD40-like Beta Propeller Repeat 111 135 0.0055 T 14-10-2018 IPR011659 WD40-like Beta Propeller XF_2260 2412d3d0d234c37609f6b944a9e68e44 709 Pfam PF07676 WD40-like Beta Propeller Repeat 302 324 0.02 T 14-10-2018 IPR011659 WD40-like Beta Propeller XF_2260 2412d3d0d234c37609f6b944a9e68e44 709 Gene3D G3DSA:2.120.10.30 39 199 1.3E-20 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XF_2260 2412d3d0d234c37609f6b944a9e68e44 709 Gene3D G3DSA:3.40.50.1820 443 709 2.5E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_2260 2412d3d0d234c37609f6b944a9e68e44 709 Pfam PF00326 Prolyl oligopeptidase family 499 708 1.0E-59 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 XF_2260 2412d3d0d234c37609f6b944a9e68e44 709 Gene3D G3DSA:2.120.10.30 209 442 3.7E-16 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XF_2260 2412d3d0d234c37609f6b944a9e68e44 709 SUPERFAMILY SSF53474 452 707 1.19E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_2260 2412d3d0d234c37609f6b944a9e68e44 709 SUPERFAMILY SSF82171 54 437 5.1E-34 T 14-10-2018 XF_1025 9cbb6b74207393a41a912d20cb7e0378 127 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 9 37 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XF_1025 9cbb6b74207393a41a912d20cb7e0378 127 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 5 33 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XF_1025 9cbb6b74207393a41a912d20cb7e0378 127 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 11 39 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XF_1025 9cbb6b74207393a41a912d20cb7e0378 127 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 7 35 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XF_1025 9cbb6b74207393a41a912d20cb7e0378 127 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 1 29 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XF_1025 9cbb6b74207393a41a912d20cb7e0378 127 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 13 41 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XF_0102 fe4854fe80b0c79f75e2eed56ecf1eac 376 Gene3D G3DSA:3.40.50.2000 188 353 5.0E-24 T 14-10-2018 XF_0102 fe4854fe80b0c79f75e2eed56ecf1eac 376 Gene3D G3DSA:3.40.50.2000 13 187 7.9E-23 T 14-10-2018 XF_0102 fe4854fe80b0c79f75e2eed56ecf1eac 376 SUPERFAMILY SSF53756 11 375 5.1E-56 T 14-10-2018 XF_0102 fe4854fe80b0c79f75e2eed56ecf1eac 376 Pfam PF00534 Glycosyl transferases group 1 198 346 1.2E-16 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 XF_0102 fe4854fe80b0c79f75e2eed56ecf1eac 376 Pfam PF13439 Glycosyltransferase Family 4 21 175 1.4E-22 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XF_0505 88c688650e47b9e13dd828c48cce9f0a 350 SUPERFAMILY SSF57783 6 86 2.38E-29 T 14-10-2018 XF_0505 88c688650e47b9e13dd828c48cce9f0a 350 SMART SM00400 32 86 7.3E-27 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XF_0505 88c688650e47b9e13dd828c48cce9f0a 350 Gene3D G3DSA:3.90.580.10 2 95 4.0E-31 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 XF_0505 88c688650e47b9e13dd828c48cce9f0a 350 Pfam PF01807 CHC2 zinc finger 6 86 1.4E-30 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XF_2122 88c688650e47b9e13dd828c48cce9f0a 350 SUPERFAMILY SSF57783 6 86 2.38E-29 T 14-10-2018 XF_2122 88c688650e47b9e13dd828c48cce9f0a 350 SMART SM00400 32 86 7.3E-27 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XF_2122 88c688650e47b9e13dd828c48cce9f0a 350 Gene3D G3DSA:3.90.580.10 2 95 4.0E-31 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 XF_2122 88c688650e47b9e13dd828c48cce9f0a 350 Pfam PF01807 CHC2 zinc finger 6 86 1.4E-30 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XF_1048 38a0d094020c6bda38dd811b510681f1 396 SUPERFAMILY SSF55347 130 268 4.9E-59 T 14-10-2018 XF_1048 38a0d094020c6bda38dd811b510681f1 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 265 381 4.8E-38 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XF_1048 38a0d094020c6bda38dd811b510681f1 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 150 233 2.6E-39 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XF_1048 38a0d094020c6bda38dd811b510681f1 396 PIRSF PIRSF006205 5 390 6.9E-152 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XF_1048 38a0d094020c6bda38dd811b510681f1 396 Gene3D G3DSA:3.40.50.720 1 154 1.2E-46 T 14-10-2018 XF_1048 38a0d094020c6bda38dd811b510681f1 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 8 136 6.3E-41 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XF_1048 38a0d094020c6bda38dd811b510681f1 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 384 3.5E-137 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XF_1048 38a0d094020c6bda38dd811b510681f1 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 8 386 45.199 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XF_1048 38a0d094020c6bda38dd811b510681f1 396 Gene3D G3DSA:1.10.1740.10 306 390 1.8E-27 T 14-10-2018 XF_1048 38a0d094020c6bda38dd811b510681f1 396 SUPERFAMILY SSF51735 6 154 1.35E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1048 38a0d094020c6bda38dd811b510681f1 396 SUPERFAMILY SSF69055 295 386 1.31E-29 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XF_0732 a47f3ed2c0ebc73569ec017a4d04cb25 72 Gene3D G3DSA:3.10.350.10 5 72 6.3E-19 T 14-10-2018 IPR036779 LysM domain superfamily XF_0732 a47f3ed2c0ebc73569ec017a4d04cb25 72 Pfam PF05489 Phage Tail Protein X 4 64 8.0E-29 T 14-10-2018 IPR008861 Phage Tail Protein X-like XF_2480 a47f3ed2c0ebc73569ec017a4d04cb25 72 Gene3D G3DSA:3.10.350.10 5 72 6.3E-19 T 14-10-2018 IPR036779 LysM domain superfamily XF_2480 a47f3ed2c0ebc73569ec017a4d04cb25 72 Pfam PF05489 Phage Tail Protein X 4 64 8.0E-29 T 14-10-2018 IPR008861 Phage Tail Protein X-like XF_0833 cce588821d0aae6f4498428f612714f8 343 SUPERFAMILY SSF46785 8 128 2.73E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_0833 cce588821d0aae6f4498428f612714f8 343 Gene3D G3DSA:1.10.10.10 13 102 2.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_0833 cce588821d0aae6f4498428f612714f8 343 Gene3D G3DSA:3.40.190.10 183 283 4.8E-63 T 14-10-2018 XF_0833 cce588821d0aae6f4498428f612714f8 343 Gene3D G3DSA:3.40.190.10 108 317 4.8E-63 T 14-10-2018 XF_0833 cce588821d0aae6f4498428f612714f8 343 Pfam PF03466 LysR substrate binding domain 105 308 6.6E-36 T 14-10-2018 IPR005119 LysR, substrate-binding XF_0833 cce588821d0aae6f4498428f612714f8 343 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 80 5.7E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_0833 cce588821d0aae6f4498428f612714f8 343 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 4.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_0833 cce588821d0aae6f4498428f612714f8 343 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 4.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_0833 cce588821d0aae6f4498428f612714f8 343 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 4.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_0833 cce588821d0aae6f4498428f612714f8 343 SUPERFAMILY SSF53850 107 313 3.1E-34 T 14-10-2018 XF_2677 c5308aadd105736292b3b7078cc122d3 721 SUPERFAMILY SSF49503 73 247 4.5E-21 T 14-10-2018 IPR008972 Cupredoxin XF_2677 c5308aadd105736292b3b7078cc122d3 721 ProSitePatterns PS00079 Multicopper oxidases signature 1. 690 710 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site XF_2677 c5308aadd105736292b3b7078cc122d3 721 ProSitePatterns PS00080 Multicopper oxidases signature 2. 695 706 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 XF_2677 c5308aadd105736292b3b7078cc122d3 721 SUPERFAMILY SSF49503 574 710 1.72E-14 T 14-10-2018 IPR008972 Cupredoxin XF_2677 c5308aadd105736292b3b7078cc122d3 721 Gene3D G3DSA:2.60.40.420 265 472 2.4E-14 T 14-10-2018 IPR008972 Cupredoxin XF_2677 c5308aadd105736292b3b7078cc122d3 721 SUPERFAMILY SSF49503 312 445 3.83E-9 T 14-10-2018 IPR008972 Cupredoxin XF_2677 c5308aadd105736292b3b7078cc122d3 721 Gene3D G3DSA:2.60.40.420 95 243 2.4E-30 T 14-10-2018 IPR008972 Cupredoxin XF_2677 c5308aadd105736292b3b7078cc122d3 721 Pfam PF07732 Multicopper oxidase 174 246 1.7E-10 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 XF_2677 c5308aadd105736292b3b7078cc122d3 721 Pfam PF07732 Multicopper oxidase 114 162 1.0E-4 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 XF_2677 c5308aadd105736292b3b7078cc122d3 721 Gene3D G3DSA:2.60.40.420 562 720 5.0E-29 T 14-10-2018 IPR008972 Cupredoxin XF_2677 c5308aadd105736292b3b7078cc122d3 721 Pfam PF07731 Multicopper oxidase 581 712 4.8E-13 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 XF_1321 e22b6ecafa40231af7cd0fea6870fc2e 269 SUPERFAMILY SSF52540 4 267 2.23E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1321 e22b6ecafa40231af7cd0fea6870fc2e 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 266 6.1E-113 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 XF_1321 e22b6ecafa40231af7cd0fea6870fc2e 269 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 226 1.8E-22 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain XF_1321 e22b6ecafa40231af7cd0fea6870fc2e 269 Gene3D G3DSA:3.40.50.300 1 259 1.3E-66 T 14-10-2018 XF_1321 e22b6ecafa40231af7cd0fea6870fc2e 269 PIRSF PIRSF003092 1 269 2.1E-91 T 14-10-2018 IPR025501 ATP binding protein MinD XF_0392 b8b2d0ee62de2f7bda27b383b2c19b60 403 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 101 1.9E-41 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XF_0392 b8b2d0ee62de2f7bda27b383b2c19b60 403 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XF_0392 b8b2d0ee62de2f7bda27b383b2c19b60 403 Gene3D G3DSA:3.30.300.10 11 272 2.3E-167 T 14-10-2018 XF_0392 b8b2d0ee62de2f7bda27b383b2c19b60 403 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XF_0392 b8b2d0ee62de2f7bda27b383b2c19b60 403 SUPERFAMILY SSF55973 235 400 2.47E-65 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XF_0392 b8b2d0ee62de2f7bda27b383b2c19b60 403 SUPERFAMILY SSF55973 110 234 5.49E-46 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XF_0392 b8b2d0ee62de2f7bda27b383b2c19b60 403 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 400 55.602 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XF_0392 b8b2d0ee62de2f7bda27b383b2c19b60 403 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 367 5.4E-178 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XF_0392 b8b2d0ee62de2f7bda27b383b2c19b60 403 Gene3D G3DSA:3.30.300.10 102 391 2.3E-167 T 14-10-2018 XF_0392 b8b2d0ee62de2f7bda27b383b2c19b60 403 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 366 7.2E-66 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XF_0392 b8b2d0ee62de2f7bda27b383b2c19b60 403 PIRSF PIRSF000497 1 401 1.6E-166 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XF_0392 b8b2d0ee62de2f7bda27b383b2c19b60 403 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 233 1.1E-41 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XF_0392 b8b2d0ee62de2f7bda27b383b2c19b60 403 SUPERFAMILY SSF55973 3 109 7.46E-46 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XF_0392 b8b2d0ee62de2f7bda27b383b2c19b60 403 Gene3D G3DSA:3.30.300.10 5 235 2.3E-167 T 14-10-2018 XF_1345 86797e46f4f256f3ef79ad1162a70eff 286 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 16 278 7.2E-124 T 14-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 XF_1345 86797e46f4f256f3ef79ad1162a70eff 286 SUPERFAMILY SSF161098 23 271 1.4E-56 T 14-10-2018 IPR035906 MetI-like superfamily XF_1345 86797e46f4f256f3ef79ad1162a70eff 286 Gene3D G3DSA:1.10.3720.10 22 280 1.1E-68 T 14-10-2018 IPR035906 MetI-like superfamily XF_1345 86797e46f4f256f3ef79ad1162a70eff 286 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 13 276 4.7E-96 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 XF_1345 86797e46f4f256f3ef79ad1162a70eff 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 276 4.5E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XF_1816 73cbea07f7914b8a586912ea8e76c0c7 64 SUPERFAMILY SSF57829 2 55 3.42E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 XF_1816 73cbea07f7914b8a586912ea8e76c0c7 64 Pfam PF01783 Ribosomal L32p protein family 2 55 7.6E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1816 73cbea07f7914b8a586912ea8e76c0c7 64 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.4E-19 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1816 73cbea07f7914b8a586912ea8e76c0c7 64 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.135 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2542 b956db87539c1905abcdbcab7abf9480 148 Gene3D G3DSA:3.30.700.10 7 146 6.0E-29 T 14-10-2018 XF_2542 b956db87539c1905abcdbcab7abf9480 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.3E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_2542 b956db87539c1905abcdbcab7abf9480 148 Pfam PF00114 Pilin (bacterial filament) 35 145 1.5E-24 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XF_2542 b956db87539c1905abcdbcab7abf9480 148 SUPERFAMILY SSF54523 7 146 1.2E-27 T 14-10-2018 XF_2542 b956db87539c1905abcdbcab7abf9480 148 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_2542 b956db87539c1905abcdbcab7abf9480 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 5.4E-12 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0002 486c1a177d76ef84e2454f53d63e89f7 366 SMART SM00480 17 362 2.7E-131 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 XF_0002 486c1a177d76ef84e2454f53d63e89f7 366 SUPERFAMILY SSF55979 246 366 1.78E-32 T 14-10-2018 XF_0002 486c1a177d76ef84e2454f53d63e89f7 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 3.5E-36 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 XF_0002 486c1a177d76ef84e2454f53d63e89f7 366 Gene3D G3DSA:3.10.150.10 1 121 7.6E-40 T 14-10-2018 XF_0002 486c1a177d76ef84e2454f53d63e89f7 366 SUPERFAMILY SSF55979 127 244 4.65E-27 T 14-10-2018 XF_0002 486c1a177d76ef84e2454f53d63e89f7 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 365 1.1E-33 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 XF_0002 486c1a177d76ef84e2454f53d63e89f7 366 Gene3D G3DSA:3.10.150.10 122 248 4.2E-37 T 14-10-2018 XF_0002 486c1a177d76ef84e2454f53d63e89f7 366 PIRSF PIRSF000804 1 366 1.3E-116 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 XF_0002 486c1a177d76ef84e2454f53d63e89f7 366 Gene3D G3DSA:3.10.150.10 249 366 7.9E-36 T 14-10-2018 XF_0002 486c1a177d76ef84e2454f53d63e89f7 366 SUPERFAMILY SSF55979 1 116 5.83E-27 T 14-10-2018 XF_0002 486c1a177d76ef84e2454f53d63e89f7 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 6.2E-35 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 XF_0002 486c1a177d76ef84e2454f53d63e89f7 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.2E-106 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 XF_1827 a32bcc954c1e8e84cff4e8abc108758d 143 Pfam PF02566 OsmC-like protein 44 137 2.8E-16 T 14-10-2018 IPR003718 OsmC/Ohr family XF_1827 a32bcc954c1e8e84cff4e8abc108758d 143 Gene3D G3DSA:2.20.25.10 1 48 4.6E-24 T 14-10-2018 XF_1827 a32bcc954c1e8e84cff4e8abc108758d 143 SUPERFAMILY SSF82784 5 139 2.22E-41 T 14-10-2018 IPR036102 OsmC/Ohr superfamily XF_1827 a32bcc954c1e8e84cff4e8abc108758d 143 Gene3D G3DSA:3.30.300.20 49 141 3.0E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta XF_1827 a32bcc954c1e8e84cff4e8abc108758d 143 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 8 139 5.0E-52 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 XF_0145 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0145 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0145 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0145 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0145 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0145 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 2.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0145 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 2.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0145 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 2.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0145 a96ea94deab4901c5bdaaa98d85dadfc 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 0.0063 T 14-10-2018 XF_0145 a96ea94deab4901c5bdaaa98d85dadfc 251 Gene3D G3DSA:3.40.50.720 2 236 6.2E-60 T 14-10-2018 XF_0145 a96ea94deab4901c5bdaaa98d85dadfc 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XF_0145 a96ea94deab4901c5bdaaa98d85dadfc 251 Pfam PF00106 short chain dehydrogenase 3 187 6.7E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0145 a96ea94deab4901c5bdaaa98d85dadfc 251 SUPERFAMILY SSF51735 3 225 1.47E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0169 0e9ed280d50a302395f8da83947d6678 418 Pfam PF01479 S4 domain 339 377 8.4E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_0169 0e9ed280d50a302395f8da83947d6678 418 SUPERFAMILY SSF55174 333 400 1.09E-14 T 14-10-2018 XF_0169 0e9ed280d50a302395f8da83947d6678 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0169 0e9ed280d50a302395f8da83947d6678 418 Gene3D G3DSA:1.10.240.10 218 329 4.7E-24 T 14-10-2018 XF_0169 0e9ed280d50a302395f8da83947d6678 418 Pfam PF00579 tRNA synthetases class I (W and Y) 31 315 3.2E-69 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0169 0e9ed280d50a302395f8da83947d6678 418 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 400 44.783 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 XF_0169 0e9ed280d50a302395f8da83947d6678 418 Gene3D G3DSA:3.40.50.620 5 217 3.5E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0169 0e9ed280d50a302395f8da83947d6678 418 SUPERFAMILY SSF52374 8 316 8.67E-88 T 14-10-2018 XF_0169 0e9ed280d50a302395f8da83947d6678 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 6.0E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XF_0169 0e9ed280d50a302395f8da83947d6678 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 6.0E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XF_0169 0e9ed280d50a302395f8da83947d6678 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 6.0E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XF_0169 0e9ed280d50a302395f8da83947d6678 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 6.0E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XF_0169 0e9ed280d50a302395f8da83947d6678 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 9 399 7.0E-109 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XF_0169 0e9ed280d50a302395f8da83947d6678 418 Gene3D G3DSA:3.10.290.10 330 400 6.5E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XF_2088 c648488d03b9191ee777ef0edd39807f 205 Gene3D G3DSA:2.60.120.10 79 200 1.4E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold XF_2088 c648488d03b9191ee777ef0edd39807f 205 SUPERFAMILY SSF51182 76 199 1.01E-23 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily XF_2088 c648488d03b9191ee777ef0edd39807f 205 Pfam PF07883 Cupin domain 113 183 1.4E-17 T 14-10-2018 IPR013096 Cupin 2, conserved barrel XF_0591 afce732145eafa58efe9ab2275b12546 240 Gene3D G3DSA:3.90.550.10 1 236 3.2E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_0591 afce732145eafa58efe9ab2275b12546 240 Pfam PF00483 Nucleotidyl transferase 2 118 4.4E-11 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XF_0591 afce732145eafa58efe9ab2275b12546 240 SUPERFAMILY SSF53448 1 233 6.31E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_2220 adbfc38ad0ac114da76070c4feb45e77 304 Gene3D G3DSA:3.40.190.10 109 198 2.2E-62 T 14-10-2018 XF_2220 adbfc38ad0ac114da76070c4feb45e77 304 Gene3D G3DSA:3.30.70.120 232 303 6.0E-8 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XF_2220 adbfc38ad0ac114da76070c4feb45e77 304 Pfam PF01634 ATP phosphoribosyltransferase 60 223 2.3E-43 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XF_2220 adbfc38ad0ac114da76070c4feb45e77 304 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 12 304 29.754 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 XF_2220 adbfc38ad0ac114da76070c4feb45e77 304 SUPERFAMILY SSF53850 12 227 3.74E-59 T 14-10-2018 XF_2220 adbfc38ad0ac114da76070c4feb45e77 304 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 162 183 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 XF_2220 adbfc38ad0ac114da76070c4feb45e77 304 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 13 201 4.1E-52 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XF_2220 adbfc38ad0ac114da76070c4feb45e77 304 Gene3D G3DSA:3.40.190.10 13 226 2.2E-62 T 14-10-2018 XF_2220 adbfc38ad0ac114da76070c4feb45e77 304 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 207 302 4.2E-16 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XF_2220 adbfc38ad0ac114da76070c4feb45e77 304 Pfam PF08029 HisG, C-terminal domain 231 301 3.0E-8 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XF_2614 46526996b00e083750a21f62e20ecdeb 203 SUPERFAMILY SSF54719 88 202 3.4E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_2614 46526996b00e083750a21f62e20ecdeb 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 1.8E-37 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_2614 46526996b00e083750a21f62e20ecdeb 203 Gene3D G3DSA:2.40.500.20 90 203 8.6E-44 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_2614 46526996b00e083750a21f62e20ecdeb 203 Gene3D G3DSA:1.10.287.990 20 89 6.7E-30 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_2614 46526996b00e083750a21f62e20ecdeb 203 SUPERFAMILY SSF46609 1 89 1.44E-35 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_2614 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.3E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_2614 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 3.3E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_2614 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 3.3E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_2614 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.3E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_2614 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 3.3E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_2614 46526996b00e083750a21f62e20ecdeb 203 PIRSF PIRSF000349 1 203 1.1E-77 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_2614 46526996b00e083750a21f62e20ecdeb 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 2.9E-32 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_2614 46526996b00e083750a21f62e20ecdeb 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_1111 4e1b857586629580d244dad904a3b440 338 Pfam PF00472 RF-1 domain 192 301 3.9E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XF_1111 4e1b857586629580d244dad904a3b440 338 SMART SM00937 49 159 1.5E-54 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 XF_1111 4e1b857586629580d244dad904a3b440 338 SUPERFAMILY SSF75620 3 327 5.1E-126 T 14-10-2018 XF_1111 4e1b857586629580d244dad904a3b440 338 Gene3D G3DSA:3.30.70.1660 94 322 1.5E-98 T 14-10-2018 XF_1111 4e1b857586629580d244dad904a3b440 338 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 327 2.5E-145 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 XF_1111 4e1b857586629580d244dad904a3b440 338 Gene3D G3DSA:3.30.160.20 190 285 1.5E-98 T 14-10-2018 XF_1111 4e1b857586629580d244dad904a3b440 338 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 329 35.07 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 XF_1111 4e1b857586629580d244dad904a3b440 338 Pfam PF03462 PCRF domain 2 184 2.2E-53 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 XF_1111 4e1b857586629580d244dad904a3b440 338 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 209 225 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XF_1111 4e1b857586629580d244dad904a3b440 338 Gene3D G3DSA:1.20.58.410 1 80 1.3E-12 T 14-10-2018 XF_0459 4ce2b69fcc37391c0f95880ea59e9adb 406 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 27 384 72.69 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 XF_0459 4ce2b69fcc37391c0f95880ea59e9adb 406 PIRSF PIRSF006004 20 397 2.2E-150 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 XF_0459 4ce2b69fcc37391c0f95880ea59e9adb 406 Gene3D G3DSA:3.20.20.70 90 369 6.9E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_0459 4ce2b69fcc37391c0f95880ea59e9adb 406 Pfam PF04055 Radical SAM superfamily 134 303 4.2E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XF_0459 4ce2b69fcc37391c0f95880ea59e9adb 406 Gene3D G3DSA:1.10.150.530 27 89 7.2E-24 T 14-10-2018 XF_0459 4ce2b69fcc37391c0f95880ea59e9adb 406 SUPERFAMILY SSF102114 130 368 4.58E-17 T 14-10-2018 XF_0459 4ce2b69fcc37391c0f95880ea59e9adb 406 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 26 388 8.9E-134 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 XF_2604 e79bebf2dd390d735f9c0436dfd116a3 116 SUPERFAMILY SSF55248 21 113 4.05E-31 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 XF_2604 e79bebf2dd390d735f9c0436dfd116a3 116 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 19 112 22.85 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 XF_2604 e79bebf2dd390d735f9c0436dfd116a3 116 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 21 110 2.1E-25 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 XF_2604 e79bebf2dd390d735f9c0436dfd116a3 116 Gene3D G3DSA:3.30.1360.20 20 115 5.2E-30 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 XF_0451 ff028f0e2e851c6e71da6523dd28db70 363 SMART SM00829 53 360 1.5E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XF_0451 ff028f0e2e851c6e71da6523dd28db70 363 SUPERFAMILY SSF51735 153 329 5.44E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0451 ff028f0e2e851c6e71da6523dd28db70 363 Gene3D G3DSA:3.40.50.720 163 329 3.4E-97 T 14-10-2018 XF_0451 ff028f0e2e851c6e71da6523dd28db70 363 SUPERFAMILY SSF50129 40 179 1.42E-35 T 14-10-2018 IPR011032 GroES-like superfamily XF_0451 ff028f0e2e851c6e71da6523dd28db70 363 Pfam PF00107 Zinc-binding dehydrogenase 196 307 1.0E-7 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XF_0451 ff028f0e2e851c6e71da6523dd28db70 363 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 41 362 1.2E-119 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI XF_0451 ff028f0e2e851c6e71da6523dd28db70 363 Gene3D G3DSA:3.90.180.10 55 361 3.4E-97 T 14-10-2018 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 SUPERFAMILY SSF63380 234 460 4.25E-52 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XF_1499 907bc7140afcad5c65a00442708f6fa3 612 SUPERFAMILY SSF52343 459 612 5.89E-48 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XF_1499 907bc7140afcad5c65a00442708f6fa3 612 Gene3D G3DSA:3.40.50.360 59 220 4.6E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily XF_1499 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00369 Flavodoxin signature 149 159 2.8E-18 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00369 Flavodoxin signature 69 82 2.8E-18 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00369 Flavodoxin signature 173 192 2.8E-18 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00369 Flavodoxin signature 117 128 2.8E-18 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 Pfam PF00258 Flavodoxin 70 193 9.2E-33 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 PIRSF PIRSF000207 1 612 8.4E-199 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 Pfam PF00175 Oxidoreductase NAD-binding domain 471 576 6.1E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 Gene3D G3DSA:3.40.50.80 459 612 5.0E-52 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XF_1499 907bc7140afcad5c65a00442708f6fa3 612 SUPERFAMILY SSF52218 67 213 3.24E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily XF_1499 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 283 293 2.9E-23 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 495 504 2.9E-23 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 508 519 2.9E-23 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 434 443 2.9E-23 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 470 489 2.9E-23 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 401 408 2.9E-23 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 562 570 2.9E-23 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 539 555 2.9E-23 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 Pfam PF00667 FAD binding domain 264 439 2.4E-18 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 Gene3D G3DSA:1.20.990.10 293 399 5.3E-58 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 612 5.3E-233 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XF_1499 907bc7140afcad5c65a00442708f6fa3 612 Gene3D G3DSA:2.40.30.10 262 453 5.3E-58 T 14-10-2018 XF_2471 7fdb1139cbcf2027042c3d1b89b16662 246 SUPERFAMILY SSF53335 18 233 2.5E-51 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_2471 7fdb1139cbcf2027042c3d1b89b16662 246 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 16 239 37.048 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 XF_2471 7fdb1139cbcf2027042c3d1b89b16662 246 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 233 1.7E-85 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 XF_2471 7fdb1139cbcf2027042c3d1b89b16662 246 Pfam PF13489 Methyltransferase domain 54 207 5.3E-24 T 14-10-2018 XF_2471 7fdb1139cbcf2027042c3d1b89b16662 246 Gene3D G3DSA:3.40.50.150 16 238 8.1E-77 T 14-10-2018 XF_2573 04c5cbb92b3e4e021fbdefab9d8fc022 311 SUPERFAMILY SSF103481 44 144 1.03E-16 T 14-10-2018 XF_2573 04c5cbb92b3e4e021fbdefab9d8fc022 311 Pfam PF00892 EamA-like transporter family 152 278 1.3E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XF_2573 04c5cbb92b3e4e021fbdefab9d8fc022 311 Pfam PF00892 EamA-like transporter family 11 141 1.0E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XF_2573 04c5cbb92b3e4e021fbdefab9d8fc022 311 SUPERFAMILY SSF103481 185 282 1.96E-15 T 14-10-2018 XF_2013 3f1fc3e57f43c4c8a40678568d8f9c64 203 SUPERFAMILY SSF100950 11 194 7.39E-50 T 14-10-2018 IPR037171 NagB/RpiA transferase-like XF_2013 3f1fc3e57f43c4c8a40678568d8f9c64 203 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 13 191 2.8E-47 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase XF_2013 3f1fc3e57f43c4c8a40678568d8f9c64 203 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 14 191 8.0E-33 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase XF_2013 3f1fc3e57f43c4c8a40678568d8f9c64 203 PIRSF PIRSF006806 7 193 1.2E-30 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase XF_2013 3f1fc3e57f43c4c8a40678568d8f9c64 203 Gene3D G3DSA:3.40.50.10420 11 197 1.9E-45 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily XF_1198 18b07be6c1ca3170d98770e84a99385f 160 SUPERFAMILY SSF52218 1 151 1.8E-25 T 14-10-2018 IPR029039 Flavoprotein-like superfamily XF_1198 18b07be6c1ca3170d98770e84a99385f 160 TIGRFAM TIGR01754 flav_RNR: putative ribonucleotide reductase-associated flavodoxin 1 144 5.9E-74 T 14-10-2018 IPR010088 Ribonucleotide reductase-associated flavodoxin, putative XF_1198 18b07be6c1ca3170d98770e84a99385f 160 Gene3D G3DSA:3.40.50.360 2 147 1.8E-16 T 14-10-2018 IPR029039 Flavoprotein-like superfamily XF_1198 18b07be6c1ca3170d98770e84a99385f 160 Pfam PF00258 Flavodoxin 8 122 1.2E-7 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 XF_1987 09e41444e4bc51db4cd5160357833dbd 717 Pfam PF08206 Ribonuclease B OB domain 86 143 5.9E-24 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain XF_1987 09e41444e4bc51db4cd5160357833dbd 717 Gene3D G3DSA:2.40.50.140 76 147 9.6E-20 T 14-10-2018 XF_1987 09e41444e4bc51db4cd5160357833dbd 717 SMART SM00357 85 144 1.0E-14 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 XF_1987 09e41444e4bc51db4cd5160357833dbd 717 TIGRFAM TIGR02063 RNase_R: ribonuclease R 20 717 4.0E-269 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 XF_1987 09e41444e4bc51db4cd5160357833dbd 717 SUPERFAMILY SSF50249 137 236 7.71E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1987 09e41444e4bc51db4cd5160357833dbd 717 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 78 716 1.6E-210 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 XF_1987 09e41444e4bc51db4cd5160357833dbd 717 SUPERFAMILY SSF50249 66 146 1.02E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1987 09e41444e4bc51db4cd5160357833dbd 717 Pfam PF00575 S1 RNA binding domain 634 713 2.0E-12 T 14-10-2018 IPR003029 S1 domain GO:0003676 XF_1987 09e41444e4bc51db4cd5160357833dbd 717 SMART SM00316 633 716 6.1E-14 T 14-10-2018 IPR022967 RNA-binding domain, S1 XF_1987 09e41444e4bc51db4cd5160357833dbd 717 ProSitePatterns PS01175 Ribonuclease II family signature. 554 578 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site XF_1987 09e41444e4bc51db4cd5160357833dbd 717 SMART SM00955 259 587 1.1E-174 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 XF_1987 09e41444e4bc51db4cd5160357833dbd 717 SUPERFAMILY SSF50249 224 633 1.14E-135 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1987 09e41444e4bc51db4cd5160357833dbd 717 Gene3D G3DSA:2.40.50.140 637 717 5.8E-21 T 14-10-2018 XF_1987 09e41444e4bc51db4cd5160357833dbd 717 Pfam PF00773 RNB domain 259 586 2.6E-104 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 XF_1987 09e41444e4bc51db4cd5160357833dbd 717 SUPERFAMILY SSF50249 635 715 3.95E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1987 09e41444e4bc51db4cd5160357833dbd 717 Hamap MF_01895 Ribonuclease R [rnr]. 39 716 56.273 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 XF_0203 7e7a263587dd4c893ecae0acb37b547d 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 48.86 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_0203 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 3.0E-45 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_0203 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 3.0E-45 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_0203 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 3.0E-45 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_0203 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 3.0E-45 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_0203 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 3.0E-45 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_0203 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 3.0E-45 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_0203 7e7a263587dd4c893ecae0acb37b547d 319 Gene3D G3DSA:3.90.226.10 1 318 1.0E-112 T 14-10-2018 XF_0203 7e7a263587dd4c893ecae0acb37b547d 319 SUPERFAMILY SSF52096 5 316 5.17E-95 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XF_0203 7e7a263587dd4c893ecae0acb37b547d 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 1.2E-60 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_0203 7e7a263587dd4c893ecae0acb37b547d 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 316 8.7E-148 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XF_0373 8ed880f983406165e6c2cc8ac468d7f2 637 Gene3D G3DSA:3.30.1370.120 294 373 8.2E-9 T 14-10-2018 IPR038591 NolW-like superfamily XF_0373 8ed880f983406165e6c2cc8ac468d7f2 637 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 196 627 6.9E-155 T 14-10-2018 IPR013355 Type IV pilus secretin PilQ XF_0373 8ed880f983406165e6c2cc8ac468d7f2 637 Gene3D G3DSA:3.55.50.30 178 292 4.6E-39 T 14-10-2018 XF_0373 8ed880f983406165e6c2cc8ac468d7f2 637 Pfam PF03958 Bacterial type II/III secretion system short domain 296 374 3.0E-12 T 14-10-2018 IPR005644 NolW-like XF_0373 8ed880f983406165e6c2cc8ac468d7f2 637 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 573 606 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 XF_0373 8ed880f983406165e6c2cc8ac468d7f2 637 PRINTS PR00811 Bacterial general secretion pathway protein D signature 459 483 5.2E-18 T 14-10-2018 IPR001775 GspD/PilQ family XF_0373 8ed880f983406165e6c2cc8ac468d7f2 637 PRINTS PR00811 Bacterial general secretion pathway protein D signature 592 610 5.2E-18 T 14-10-2018 IPR001775 GspD/PilQ family XF_0373 8ed880f983406165e6c2cc8ac468d7f2 637 PRINTS PR00811 Bacterial general secretion pathway protein D signature 374 384 5.2E-18 T 14-10-2018 IPR001775 GspD/PilQ family XF_0373 8ed880f983406165e6c2cc8ac468d7f2 637 PRINTS PR00811 Bacterial general secretion pathway protein D signature 615 629 5.2E-18 T 14-10-2018 IPR001775 GspD/PilQ family XF_0373 8ed880f983406165e6c2cc8ac468d7f2 637 Pfam PF07660 Secretin and TonB N terminus short domain 222 268 1.0E-7 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 XF_0373 8ed880f983406165e6c2cc8ac468d7f2 637 Pfam PF00263 Bacterial type II and III secretion system protein 463 628 2.5E-48 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 XF_0373 8ed880f983406165e6c2cc8ac468d7f2 637 Gene3D G3DSA:2.60.40.3470 44 169 3.1E-32 T 14-10-2018 XF_0373 8ed880f983406165e6c2cc8ac468d7f2 637 SMART SM00965 221 269 8.3E-10 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 XF_2110 4466f7a52f3eaab4d2b126ac3db63431 112 Pfam PF01381 Helix-turn-helix 59 102 1.9E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_2110 4466f7a52f3eaab4d2b126ac3db63431 112 Gene3D G3DSA:1.10.260.40 31 110 3.3E-12 T 14-10-2018 XF_2110 4466f7a52f3eaab4d2b126ac3db63431 112 SUPERFAMILY SSF47413 55 97 2.11E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_2110 4466f7a52f3eaab4d2b126ac3db63431 112 SMART SM00530 58 111 0.0031 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_0357 fc0d41603df93926f7f6b9aa3ddef553 387 Pfam PF03583 Secretory lipase 92 173 2.7E-6 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XF_0357 fc0d41603df93926f7f6b9aa3ddef553 387 Gene3D G3DSA:3.40.50.1820 1 216 2.4E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0357 fc0d41603df93926f7f6b9aa3ddef553 387 Gene3D G3DSA:3.40.50.1820 303 387 3.0E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0357 fc0d41603df93926f7f6b9aa3ddef553 387 PIRSF PIRSF029171 2 386 1.1E-79 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XF_0357 fc0d41603df93926f7f6b9aa3ddef553 387 SUPERFAMILY SSF53474 49 334 3.32E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1469 9bc1af4aff8d659880acbece3972c62d 284 SUPERFAMILY SSF88713 21 250 3.95E-41 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XF_1469 9bc1af4aff8d659880acbece3972c62d 284 Gene3D G3DSA:3.20.20.370 1 251 1.4E-60 T 14-10-2018 XF_1469 9bc1af4aff8d659880acbece3972c62d 284 Pfam PF01522 Polysaccharide deacetylase 56 223 3.7E-38 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XF_0075 c1cb2a9af703db3ff6f9781a4c790261 267 Pfam PF01063 Amino-transferase class IV 27 240 2.4E-33 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 XF_0075 c1cb2a9af703db3ff6f9781a4c790261 267 SUPERFAMILY SSF56752 18 248 1.83E-38 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 XF_0075 c1cb2a9af703db3ff6f9781a4c790261 267 Gene3D G3DSA:3.30.470.10 19 95 2.8E-7 T 14-10-2018 XF_0075 c1cb2a9af703db3ff6f9781a4c790261 267 Gene3D G3DSA:3.20.10.10 114 264 1.6E-20 T 14-10-2018 XF_2325 26c93f3cac629419c00c49a0fe070ba5 374 SUPERFAMILY SSF48600 18 107 3.51E-20 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XF_2325 26c93f3cac629419c00c49a0fe070ba5 374 SMART SM00830 23 104 2.0E-29 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XF_2325 26c93f3cac629419c00c49a0fe070ba5 374 Pfam PF01842 ACT domain 292 357 1.4E-10 T 14-10-2018 IPR002912 ACT domain XF_2325 26c93f3cac629419c00c49a0fe070ba5 374 Pfam PF01817 Chorismate mutase type II 23 102 4.9E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XF_2325 26c93f3cac629419c00c49a0fe070ba5 374 TIGRFAM TIGR01807 CM_P2: chorismate mutase 19 94 6.3E-24 T 14-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 XF_2325 26c93f3cac629419c00c49a0fe070ba5 374 SUPERFAMILY SSF53850 105 288 7.49E-51 T 14-10-2018 XF_2325 26c93f3cac629419c00c49a0fe070ba5 374 Gene3D G3DSA:3.30.70.260 283 373 1.1E-29 T 14-10-2018 XF_2325 26c93f3cac629419c00c49a0fe070ba5 374 PIRSF PIRSF001500 12 374 6.5E-145 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 XF_2325 26c93f3cac629419c00c49a0fe070ba5 374 SUPERFAMILY SSF55021 276 370 3.05E-28 T 14-10-2018 XF_2325 26c93f3cac629419c00c49a0fe070ba5 374 Gene3D G3DSA:1.20.59.10 21 105 3.8E-27 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XF_2325 26c93f3cac629419c00c49a0fe070ba5 374 Gene3D G3DSA:3.40.190.10 108 279 2.1E-52 T 14-10-2018 XF_2325 26c93f3cac629419c00c49a0fe070ba5 374 Gene3D G3DSA:3.40.190.10 186 271 2.1E-52 T 14-10-2018 XF_2325 26c93f3cac629419c00c49a0fe070ba5 374 Pfam PF00800 Prephenate dehydratase 106 282 9.5E-59 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 XF_1357 cf8be024be226ba05d6c1bfb2b9625dc 401 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 XF_1357 cf8be024be226ba05d6c1bfb2b9625dc 401 Pfam PF00155 Aminotransferase class I and II 45 385 1.3E-58 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XF_1357 cf8be024be226ba05d6c1bfb2b9625dc 401 SUPERFAMILY SSF53383 9 389 7.51E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XF_1357 cf8be024be226ba05d6c1bfb2b9625dc 401 Gene3D G3DSA:3.90.1150.10 44 382 6.0E-122 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XF_1357 cf8be024be226ba05d6c1bfb2b9625dc 401 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 385 2.0E-142 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 XF_1357 cf8be024be226ba05d6c1bfb2b9625dc 401 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 6 389 43.881 T 14-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 XF_1357 cf8be024be226ba05d6c1bfb2b9625dc 401 Gene3D G3DSA:3.40.640.10 60 291 6.0E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XF_0760 b921c75806c4f505b11ff6aed288ec43 619 SUPERFAMILY SSF118116 428 617 1.31E-57 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily XF_0760 b921c75806c4f505b11ff6aed288ec43 619 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 307 2.3E-95 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 XF_0760 b921c75806c4f505b11ff6aed288ec43 619 SUPERFAMILY SSF54211 190 327 1.1E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_0760 b921c75806c4f505b11ff6aed288ec43 619 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site XF_0760 b921c75806c4f505b11ff6aed288ec43 619 Pfam PF08676 MutL C terminal dimerisation domain 428 575 3.1E-48 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 XF_0760 b921c75806c4f505b11ff6aed288ec43 619 SMART SM00853 432 575 2.4E-53 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 XF_0760 b921c75806c4f505b11ff6aed288ec43 619 SUPERFAMILY SSF55874 1 204 2.49E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0760 b921c75806c4f505b11ff6aed288ec43 619 Gene3D G3DSA:2.30.42.20 434 612 1.6E-56 T 14-10-2018 XF_0760 b921c75806c4f505b11ff6aed288ec43 619 Gene3D G3DSA:3.30.1370.100 475 570 1.6E-56 T 14-10-2018 XF_0760 b921c75806c4f505b11ff6aed288ec43 619 Gene3D G3DSA:3.30.565.10 1 202 7.0E-65 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0760 b921c75806c4f505b11ff6aed288ec43 619 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 615 28.856 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 XF_0760 b921c75806c4f505b11ff6aed288ec43 619 SMART SM01340 209 327 1.7E-57 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 XF_0760 b921c75806c4f505b11ff6aed288ec43 619 Gene3D G3DSA:3.30.230.10 214 326 2.8E-39 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XF_0760 b921c75806c4f505b11ff6aed288ec43 619 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 115 7.1E-11 T 14-10-2018 XF_0760 b921c75806c4f505b11ff6aed288ec43 619 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 210 326 1.5E-40 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 XF_1609 aa20b2c459b1cab0e377177a2801e52c 426 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 93 410 1.0E-93 T 14-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 XF_1609 aa20b2c459b1cab0e377177a2801e52c 426 Gene3D G3DSA:1.20.1250.20 229 417 7.5E-59 T 14-10-2018 XF_1609 aa20b2c459b1cab0e377177a2801e52c 426 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 13 411 4.7E-86 T 14-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 XF_1609 aa20b2c459b1cab0e377177a2801e52c 426 Pfam PF07690 Major Facilitator Superfamily 19 372 2.2E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XF_1609 aa20b2c459b1cab0e377177a2801e52c 426 Gene3D G3DSA:1.20.1250.20 8 227 3.1E-58 T 14-10-2018 XF_1609 aa20b2c459b1cab0e377177a2801e52c 426 SUPERFAMILY SSF103473 11 411 1.15E-39 T 14-10-2018 IPR036259 MFS transporter superfamily XF_0086 42e002d04c3f50a86d8b0fd2f8a357d5 162 Gene3D G3DSA:3.90.950.20 1 162 4.7E-58 T 14-10-2018 IPR036653 CinA-like, C-terminal XF_0086 42e002d04c3f50a86d8b0fd2f8a357d5 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 159 4.2E-47 T 14-10-2018 IPR008136 CinA, C-terminal XF_0086 42e002d04c3f50a86d8b0fd2f8a357d5 162 SUPERFAMILY SSF142433 5 160 5.23E-52 T 14-10-2018 IPR036653 CinA-like, C-terminal XF_0086 42e002d04c3f50a86d8b0fd2f8a357d5 162 Pfam PF02464 Competence-damaged protein 9 160 8.0E-54 T 14-10-2018 IPR008136 CinA, C-terminal XF_1545 3a2ac20a36acc85b1efb0328d5f3a473 276 Pfam PF00899 ThiF family 33 172 1.6E-28 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 XF_1545 3a2ac20a36acc85b1efb0328d5f3a473 276 Gene3D G3DSA:3.40.50.720 11 276 1.1E-79 T 14-10-2018 XF_1545 3a2ac20a36acc85b1efb0328d5f3a473 276 SUPERFAMILY SSF69572 14 271 4.58E-50 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 XF_1064 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 Hamap MF_00524 Glucokinase [glk]. 7 328 32.537 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XF_1064 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 SUPERFAMILY SSF53067 8 327 7.43E-58 T 14-10-2018 XF_1064 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 Gene3D G3DSA:3.30.420.40 8 322 2.6E-95 T 14-10-2018 XF_1064 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 TIGRFAM TIGR00749 glk: glucokinase 9 322 1.6E-81 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XF_1064 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 Gene3D G3DSA:3.40.367.20 107 311 2.6E-95 T 14-10-2018 XF_1064 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 Pfam PF02685 Glucokinase 9 327 1.3E-111 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XF_1328 fea91a2d26c4d200d5983ed22b073972 188 Pfam PF01292 Prokaryotic cytochrome b561 9 180 4.4E-29 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 XF_1328 fea91a2d26c4d200d5983ed22b073972 188 SUPERFAMILY SSF81342 6 180 1.26E-35 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 XF_2193 ebb0e2754baffa7bfe2b93c56dd18b20 130 SUPERFAMILY SSF160472 1 122 2.62E-37 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_2193 ebb0e2754baffa7bfe2b93c56dd18b20 130 Pfam PF04591 Protein of unknown function, DUF596 56 129 2.0E-23 T 14-10-2018 IPR007670 Protein of unknown function DUF596 XF_2193 ebb0e2754baffa7bfe2b93c56dd18b20 130 Gene3D G3DSA:1.10.3510.10 3 128 1.6E-12 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_2544 42d5e3c1e6def9e3c88a987ef58f028e 577 Gene3D G3DSA:3.40.50.300 302 577 6.7E-104 T 14-10-2018 XF_2544 42d5e3c1e6def9e3c88a987ef58f028e 577 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 15 577 2.0E-266 T 14-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 XF_2544 42d5e3c1e6def9e3c88a987ef58f028e 577 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 48 152 5.9E-19 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal XF_2544 42d5e3c1e6def9e3c88a987ef58f028e 577 SUPERFAMILY SSF52540 186 575 1.53E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2544 42d5e3c1e6def9e3c88a987ef58f028e 577 SUPERFAMILY SSF160246 11 148 2.2E-34 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily XF_2544 42d5e3c1e6def9e3c88a987ef58f028e 577 Gene3D G3DSA:3.30.300.160 69 149 5.2E-8 T 14-10-2018 XF_2544 42d5e3c1e6def9e3c88a987ef58f028e 577 Pfam PF00437 Type II/IV secretion system protein 200 467 8.3E-89 T 14-10-2018 IPR001482 Type II/IV secretion system protein XF_2544 42d5e3c1e6def9e3c88a987ef58f028e 577 Gene3D G3DSA:3.30.450.90 176 300 1.1E-48 T 14-10-2018 XF_2544 42d5e3c1e6def9e3c88a987ef58f028e 577 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 395 409 - T 14-10-2018 IPR001482 Type II/IV secretion system protein XF_1822 2aee02a4171b78dbf89677d48a43fb77 366 Gene3D G3DSA:1.10.3730.40 204 359 3.4E-70 T 14-10-2018 XF_1822 2aee02a4171b78dbf89677d48a43fb77 366 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 23 350 43.663 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XF_1822 2aee02a4171b78dbf89677d48a43fb77 366 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 205 348 4.6E-63 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XF_1822 2aee02a4171b78dbf89677d48a43fb77 366 SUPERFAMILY SSF51735 35 204 5.16E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1822 2aee02a4171b78dbf89677d48a43fb77 366 Gene3D G3DSA:3.40.50.720 20 203 4.4E-67 T 14-10-2018 XF_1822 2aee02a4171b78dbf89677d48a43fb77 366 PIRSF PIRSF000116 26 231 2.2E-40 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XF_1822 2aee02a4171b78dbf89677d48a43fb77 366 PIRSF PIRSF000116 223 354 8.0E-13 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XF_1822 2aee02a4171b78dbf89677d48a43fb77 366 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 39 348 2.0E-124 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XF_1822 2aee02a4171b78dbf89677d48a43fb77 366 SUPERFAMILY SSF48179 205 358 2.21E-68 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XF_1822 2aee02a4171b78dbf89677d48a43fb77 366 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 39 198 6.5E-68 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XF_0128 4333c8d455c2adfaeedf573077387471 390 Gene3D G3DSA:3.40.50.1100 58 349 4.5E-65 T 14-10-2018 XF_0128 4333c8d455c2adfaeedf573077387471 390 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 57 343 1.3E-44 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XF_0128 4333c8d455c2adfaeedf573077387471 390 Gene3D G3DSA:3.40.50.1100 72 178 4.5E-65 T 14-10-2018 XF_0128 4333c8d455c2adfaeedf573077387471 390 SUPERFAMILY SSF53686 8 362 1.2E-66 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XF_2290 0e32775260d238d3c7a4715f026993d7 312 SUPERFAMILY SSF56672 28 256 7.34E-32 T 14-10-2018 XF_1159 3bf35135801b59290d58ce6a98b7840d 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.7E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1159 3bf35135801b59290d58ce6a98b7840d 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.7E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1159 3bf35135801b59290d58ce6a98b7840d 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.7E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1159 3bf35135801b59290d58ce6a98b7840d 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.7E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1159 3bf35135801b59290d58ce6a98b7840d 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 35.985 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1159 3bf35135801b59290d58ce6a98b7840d 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1159 3bf35135801b59290d58ce6a98b7840d 137 Gene3D G3DSA:3.90.1170.10 1 137 3.4E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 XF_1159 3bf35135801b59290d58ce6a98b7840d 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.8E-47 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 XF_1159 3bf35135801b59290d58ce6a98b7840d 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 6.3E-55 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1159 3bf35135801b59290d58ce6a98b7840d 137 SUPERFAMILY SSF54686 1 134 3.92E-53 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 XF_2311 75c8e820e67eaf6fb311b84b652a6987 627 SUPERFAMILY SSF47781 527 613 6.67E-20 T 14-10-2018 IPR010994 RuvA domain 2-like XF_2311 75c8e820e67eaf6fb311b84b652a6987 627 Gene3D G3DSA:1.10.150.20 559 613 1.1E-20 T 14-10-2018 XF_2311 75c8e820e67eaf6fb311b84b652a6987 627 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 390 546 1.6E-47 T 14-10-2018 IPR001162 UvrC family homology region XF_2311 75c8e820e67eaf6fb311b84b652a6987 627 SUPERFAMILY SSF46600 199 252 1.15E-11 T 14-10-2018 IPR036876 UVR domain superfamily XF_2311 75c8e820e67eaf6fb311b84b652a6987 627 SMART SM00465 27 108 1.1E-16 T 14-10-2018 IPR000305 GIY-YIG endonuclease XF_2311 75c8e820e67eaf6fb311b84b652a6987 627 Gene3D G3DSA:3.40.1440.10 16 112 7.7E-29 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 XF_2311 75c8e820e67eaf6fb311b84b652a6987 627 Hamap MF_00203 UvrABC system protein C [uvrC]. 14 611 26.68 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 XF_2311 75c8e820e67eaf6fb311b84b652a6987 627 Gene3D G3DSA:3.30.420.340 382 556 6.4E-47 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily XF_2311 75c8e820e67eaf6fb311b84b652a6987 627 SUPERFAMILY SSF82771 26 110 1.57E-19 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 XF_2311 75c8e820e67eaf6fb311b84b652a6987 627 Pfam PF02151 UvrB/uvrC motif 216 246 5.7E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 XF_2311 75c8e820e67eaf6fb311b84b652a6987 627 Pfam PF01541 GIY-YIG catalytic domain 29 103 2.9E-7 T 14-10-2018 IPR000305 GIY-YIG endonuclease XF_2311 75c8e820e67eaf6fb311b84b652a6987 627 SMART SM00278 592 611 88.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XF_2311 75c8e820e67eaf6fb311b84b652a6987 627 SMART SM00278 560 579 7.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XF_2311 75c8e820e67eaf6fb311b84b652a6987 627 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 22 591 1.1E-176 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 XF_0147 e411b9d82303f1df44534b3d77378b45 586 Pfam PF05746 DALR anticodon binding domain 465 586 1.1E-33 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 XF_0147 e411b9d82303f1df44534b3d77378b45 586 SUPERFAMILY SSF52374 139 475 4.29E-89 T 14-10-2018 XF_0147 e411b9d82303f1df44534b3d77378b45 586 PRINTS PR01038 Arginyl-tRNA synthetase signature 145 160 2.8E-22 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XF_0147 e411b9d82303f1df44534b3d77378b45 586 PRINTS PR01038 Arginyl-tRNA synthetase signature 160 176 2.8E-22 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XF_0147 e411b9d82303f1df44534b3d77378b45 586 PRINTS PR01038 Arginyl-tRNA synthetase signature 332 353 2.8E-22 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XF_0147 e411b9d82303f1df44534b3d77378b45 586 PRINTS PR01038 Arginyl-tRNA synthetase signature 184 197 2.8E-22 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XF_0147 e411b9d82303f1df44534b3d77378b45 586 SUPERFAMILY SSF47323 460 586 1.5E-34 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0147 e411b9d82303f1df44534b3d77378b45 586 Gene3D G3DSA:1.10.730.10 460 586 1.6E-152 T 14-10-2018 XF_0147 e411b9d82303f1df44534b3d77378b45 586 Pfam PF00750 tRNA synthetases class I (R) 127 434 3.9E-27 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 XF_0147 e411b9d82303f1df44534b3d77378b45 586 Hamap MF_00123 Arginine--tRNA ligase [argS]. 27 586 24.692 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XF_0147 e411b9d82303f1df44534b3d77378b45 586 SUPERFAMILY SSF55190 4 136 3.4E-27 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 XF_0147 e411b9d82303f1df44534b3d77378b45 586 Gene3D G3DSA:3.30.1360.70 26 136 4.2E-23 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 XF_0147 e411b9d82303f1df44534b3d77378b45 586 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 155 164 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0147 e411b9d82303f1df44534b3d77378b45 586 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 51 586 3.1E-126 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XF_0147 e411b9d82303f1df44534b3d77378b45 586 Gene3D G3DSA:3.40.50.620 146 459 1.6E-152 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0147 e411b9d82303f1df44534b3d77378b45 586 SMART SM00836 465 586 2.6E-44 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 XF_0147 e411b9d82303f1df44534b3d77378b45 586 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 47 116 1.8E-22 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XF_0147 e411b9d82303f1df44534b3d77378b45 586 SMART SM01016 27 116 4.1E-34 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XF_1557 795c43a7867f7a52c11229bd39e0f9dd 82 Pfam PF13986 Domain of unknown function (DUF4224) 19 63 8.1E-18 T 14-10-2018 IPR025319 Domain of unknown function DUF4224 XF_0955 8f902ba236ea8ecf288a14c6b9ee4e2c 157 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 22 147 7.1E-41 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 XF_0955 8f902ba236ea8ecf288a14c6b9ee4e2c 157 Pfam PF01029 NusB family 24 146 7.3E-32 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 XF_0955 8f902ba236ea8ecf288a14c6b9ee4e2c 157 Gene3D G3DSA:1.10.940.10 15 154 9.2E-44 T 14-10-2018 IPR035926 NusB-like superfamily XF_0955 8f902ba236ea8ecf288a14c6b9ee4e2c 157 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 20 151 21.606 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 XF_0955 8f902ba236ea8ecf288a14c6b9ee4e2c 157 SUPERFAMILY SSF48013 21 149 1.23E-38 T 14-10-2018 IPR035926 NusB-like superfamily XF_1376 f21797e1f32c9f18813a9e8dfa45592c 268 Pfam PF00290 Tryptophan synthase alpha chain 8 246 3.4E-81 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XF_1376 f21797e1f32c9f18813a9e8dfa45592c 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 245 1.2E-69 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XF_1376 f21797e1f32c9f18813a9e8dfa45592c 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 263 33.631 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XF_1376 f21797e1f32c9f18813a9e8dfa45592c 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XF_1376 f21797e1f32c9f18813a9e8dfa45592c 268 SUPERFAMILY SSF51366 1 243 1.41E-83 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XF_1376 f21797e1f32c9f18813a9e8dfa45592c 268 Gene3D G3DSA:3.20.20.70 1 268 1.8E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_0562 f80869bbc9c084fb5323d46ec7a8821c 246 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 8 244 16.165 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XF_0562 f80869bbc9c084fb5323d46ec7a8821c 246 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 13 230 2.5E-65 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XF_0562 f80869bbc9c084fb5323d46ec7a8821c 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 2.3E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XF_0562 f80869bbc9c084fb5323d46ec7a8821c 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 2.3E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XF_0562 f80869bbc9c084fb5323d46ec7a8821c 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 12 39 2.3E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XF_0562 f80869bbc9c084fb5323d46ec7a8821c 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 158 186 2.3E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XF_0562 f80869bbc9c084fb5323d46ec7a8821c 246 ProSitePatterns PS01218 TatC family signature. 158 177 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site XF_0562 f80869bbc9c084fb5323d46ec7a8821c 246 Pfam PF00902 Sec-independent protein translocase protein (TatC) 15 225 5.5E-65 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XF_2093 de916acb2ea9a6c88e70407f66d25324 408 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 380 3.3E-78 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XF_2093 de916acb2ea9a6c88e70407f66d25324 408 Gene3D G3DSA:2.40.420.20 311 377 2.4E-101 T 14-10-2018 XF_2093 de916acb2ea9a6c88e70407f66d25324 408 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 300 1.8E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XF_2093 de916acb2ea9a6c88e70407f66d25324 408 Gene3D G3DSA:2.40.30.170 57 310 2.4E-101 T 14-10-2018 XF_2093 de916acb2ea9a6c88e70407f66d25324 408 Gene3D G3DSA:2.40.50.100 70 214 2.4E-101 T 14-10-2018 XF_2093 de916acb2ea9a6c88e70407f66d25324 408 SUPERFAMILY SSF111369 59 304 3.92E-75 T 14-10-2018 XF_2093 de916acb2ea9a6c88e70407f66d25324 408 Gene3D G3DSA:1.10.287.470 105 178 2.4E-101 T 14-10-2018 XF_2331 dccae7988f6e107fa799da666b661527 188 Gene3D G3DSA:3.40.430.10 23 188 7.5E-49 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XF_2331 dccae7988f6e107fa799da666b661527 188 Pfam PF00186 Dihydrofolate reductase 25 185 5.5E-50 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 XF_2331 dccae7988f6e107fa799da666b661527 188 PRINTS PR00070 Dihydrofolate reductase signature 116 130 3.0E-11 T 14-10-2018 XF_2331 dccae7988f6e107fa799da666b661527 188 PRINTS PR00070 Dihydrofolate reductase signature 50 58 3.0E-11 T 14-10-2018 XF_2331 dccae7988f6e107fa799da666b661527 188 PRINTS PR00070 Dihydrofolate reductase signature 36 46 3.0E-11 T 14-10-2018 XF_2331 dccae7988f6e107fa799da666b661527 188 PRINTS PR00070 Dihydrofolate reductase signature 63 74 3.0E-11 T 14-10-2018 XF_2331 dccae7988f6e107fa799da666b661527 188 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 36 58 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 XF_2331 dccae7988f6e107fa799da666b661527 188 SUPERFAMILY SSF53597 23 186 2.24E-47 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XF_2331 dccae7988f6e107fa799da666b661527 188 PIRSF PIRSF000194 19 188 1.5E-52 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 XF_0394 6e8aa41465b011c03076dc619e6c1a22 74 Gene3D G3DSA:1.10.10.1100 4 57 8.9E-12 T 14-10-2018 XF_0394 6e8aa41465b011c03076dc619e6c1a22 74 Pfam PF04324 BFD-like [2Fe-2S] binding domain 5 51 1.7E-9 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain XF_a0012 0a332439be9d1294eb59c9535edbccf5 273 Pfam PF04335 VirB8 protein 17 223 2.5E-62 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 XF_a0012 0a332439be9d1294eb59c9535edbccf5 273 Gene3D G3DSA:3.10.450.230 84 232 1.4E-46 T 14-10-2018 XF_a0012 0a332439be9d1294eb59c9535edbccf5 273 PIRSF PIRSF003299 2 227 4.1E-73 T 14-10-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 XF_a0012 0a332439be9d1294eb59c9535edbccf5 273 SUPERFAMILY SSF54427 88 224 6.13E-40 T 14-10-2018 IPR032710 NTF2-like domain superfamily XF_1943 4e41b74331fcdfac15f9075dfffe12cd 130 SMART SM00411 33 130 7.5E-5 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_1943 4e41b74331fcdfac15f9075dfffe12cd 130 Gene3D G3DSA:4.10.520.10 32 130 1.3E-13 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XF_1943 4e41b74331fcdfac15f9075dfffe12cd 130 Pfam PF00216 Bacterial DNA-binding protein 34 128 1.6E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XF_1943 4e41b74331fcdfac15f9075dfffe12cd 130 SUPERFAMILY SSF47729 33 128 3.39E-14 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XF_1821 3dbe9ffa1e6b324a3b839d4e42609504 583 SUPERFAMILY SSF52518 8 178 1.13E-59 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold XF_1821 3dbe9ffa1e6b324a3b839d4e42609504 583 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 332 3.7E-41 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 XF_1821 3dbe9ffa1e6b324a3b839d4e42609504 583 Gene3D G3DSA:3.40.50.970 367 579 1.5E-65 T 14-10-2018 XF_1821 3dbe9ffa1e6b324a3b839d4e42609504 583 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 568 1.4E-207 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 XF_1821 3dbe9ffa1e6b324a3b839d4e42609504 583 SUPERFAMILY SSF52467 193 362 1.11E-53 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily XF_1821 3dbe9ffa1e6b324a3b839d4e42609504 583 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 544 1.6E-47 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 XF_1821 3dbe9ffa1e6b324a3b839d4e42609504 583 Gene3D G3DSA:3.40.50.1220 191 363 3.8E-50 T 14-10-2018 XF_1821 3dbe9ffa1e6b324a3b839d4e42609504 583 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 XF_1821 3dbe9ffa1e6b324a3b839d4e42609504 583 Gene3D G3DSA:3.40.50.970 2 185 5.1E-68 T 14-10-2018 XF_1821 3dbe9ffa1e6b324a3b839d4e42609504 583 SUPERFAMILY SSF52518 377 573 8.94E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold XF_1821 3dbe9ffa1e6b324a3b839d4e42609504 583 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 175 4.0E-57 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 XF_1527 f73da2475097c500aac0e524755d1cee 775 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 692 725 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 XF_1527 f73da2475097c500aac0e524755d1cee 775 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 108 756 4.2E-173 T 14-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 XF_1527 f73da2475097c500aac0e524755d1cee 775 Gene3D G3DSA:3.30.1370.120 105 260 6.6E-26 T 14-10-2018 IPR038591 NolW-like superfamily XF_1527 f73da2475097c500aac0e524755d1cee 775 Pfam PF00263 Bacterial type II and III secretion system protein 571 747 4.3E-43 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 XF_1527 f73da2475097c500aac0e524755d1cee 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 567 591 1.3E-14 T 14-10-2018 IPR001775 GspD/PilQ family XF_1527 f73da2475097c500aac0e524755d1cee 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 711 729 1.3E-14 T 14-10-2018 IPR001775 GspD/PilQ family XF_1527 f73da2475097c500aac0e524755d1cee 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 484 494 1.3E-14 T 14-10-2018 IPR001775 GspD/PilQ family XF_1527 f73da2475097c500aac0e524755d1cee 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 734 748 1.3E-14 T 14-10-2018 IPR001775 GspD/PilQ family XF_1527 f73da2475097c500aac0e524755d1cee 775 Pfam PF03958 Bacterial type II/III secretion system short domain 344 484 1.8E-16 T 14-10-2018 IPR005644 NolW-like XF_1611 673272656b18328b2ce08228c6dc3091 401 SUPERFAMILY SSF48208 11 395 2.24E-115 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 XF_1611 673272656b18328b2ce08228c6dc3091 401 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 39 389 1.5E-117 T 14-10-2018 XF_1611 673272656b18328b2ce08228c6dc3091 401 Gene3D G3DSA:1.50.10.10 9 401 3.1E-168 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 XF_0108 7afc178bf5ed48e1938e9abfd562f251 170 Pfam PF01782 RimM N-terminal domain 10 92 1.4E-21 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 XF_0108 7afc178bf5ed48e1938e9abfd562f251 170 Gene3D G3DSA:2.30.30.240 97 170 1.4E-26 T 14-10-2018 XF_0108 7afc178bf5ed48e1938e9abfd562f251 170 SUPERFAMILY SSF50447 8 95 9.89E-19 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XF_0108 7afc178bf5ed48e1938e9abfd562f251 170 Gene3D G3DSA:2.40.30.60 1 95 3.6E-24 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 XF_0108 7afc178bf5ed48e1938e9abfd562f251 170 SUPERFAMILY SSF50346 101 170 4.12E-18 T 14-10-2018 IPR011033 PRC-barrel-like superfamily XF_0108 7afc178bf5ed48e1938e9abfd562f251 170 Pfam PF05239 PRC-barrel domain 98 165 5.7E-6 T 14-10-2018 IPR027275 PRC-barrel domain XF_0108 7afc178bf5ed48e1938e9abfd562f251 170 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 169 5.3E-48 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 XF_0108 7afc178bf5ed48e1938e9abfd562f251 170 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 170 24.001 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 XF_1935 d660ae01a1ded6ed1a3a9890f1539c9d 238 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 58 237 1.2E-58 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XF_1935 d660ae01a1ded6ed1a3a9890f1539c9d 238 PIRSF PIRSF003078 22 238 1.1E-63 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XF_1935 d660ae01a1ded6ed1a3a9890f1539c9d 238 SUPERFAMILY SSF53335 57 237 1.62E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_1935 d660ae01a1ded6ed1a3a9890f1539c9d 238 Gene3D G3DSA:3.40.50.150 34 238 5.5E-60 T 14-10-2018 XF_1935 d660ae01a1ded6ed1a3a9890f1539c9d 238 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 46 234 26.129 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XF_1935 d660ae01a1ded6ed1a3a9890f1539c9d 238 Pfam PF02527 rRNA small subunit methyltransferase G 57 233 3.9E-52 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XF_1639 f3050b4d9d40aad93d8573c1ab20fbdc 399 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 72 239 3.2E-23 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XF_1639 f3050b4d9d40aad93d8573c1ab20fbdc 399 Gene3D G3DSA:3.40.47.10 2 244 7.5E-31 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 XF_1639 f3050b4d9d40aad93d8573c1ab20fbdc 399 SMART SM00825 Beta-ketoacyl synthase 4 399 6.5E-9 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XF_1639 f3050b4d9d40aad93d8573c1ab20fbdc 399 Gene3D G3DSA:3.40.47.10 250 393 1.9E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 XF_1639 f3050b4d9d40aad93d8573c1ab20fbdc 399 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 248 355 6.0E-27 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XF_1639 f3050b4d9d40aad93d8573c1ab20fbdc 399 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site XF_1639 f3050b4d9d40aad93d8573c1ab20fbdc 399 SUPERFAMILY SSF53901 211 397 4.12E-49 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 XF_1639 f3050b4d9d40aad93d8573c1ab20fbdc 399 SUPERFAMILY SSF53901 1 241 5.17E-35 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 185 5.0E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 SUPERFAMILY SSF54211 239 494 1.67E-95 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 Gene3D G3DSA:3.30.230.80 238 405 3.2E-68 T 14-10-2018 XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 Gene3D G3DSA:3.30.565.10 1 230 3.0E-76 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 PRINTS PR00775 90kDa heat shock protein signature 78 95 3.8E-58 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 PRINTS PR00775 90kDa heat shock protein signature 8 28 3.8E-58 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 PRINTS PR00775 90kDa heat shock protein signature 123 145 3.8E-58 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 PRINTS PR00775 90kDa heat shock protein signature 193 211 3.8E-58 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 PRINTS PR00775 90kDa heat shock protein signature 96 113 3.8E-58 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 PRINTS PR00775 90kDa heat shock protein signature 175 192 3.8E-58 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 PRINTS PR00775 90kDa heat shock protein signature 29 51 3.8E-58 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 SMART SM00387 30 187 2.1E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 Gene3D G3DSA:3.40.50.11260 406 492 5.2E-32 T 14-10-2018 XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 633 31.777 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 Gene3D G3DSA:1.20.120.790 501 634 1.9E-40 T 14-10-2018 IPR037196 HSP90, C-terminal domain XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 PIRSF PIRSF002583 2 637 1.0E-210 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 SUPERFAMILY SSF110942 521 633 3.53E-33 T 14-10-2018 IPR037196 HSP90, C-terminal domain XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 SUPERFAMILY SSF55874 8 217 1.01E-64 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0978 1a8ce69cd8d4f77354c6810b8f0160a6 637 Pfam PF00183 Hsp90 protein 221 632 2.2E-130 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 XF_1167 07da55ad3051ac3cce0aae151835006c 175 Gene3D G3DSA:3.90.930.12 81 175 1.1E-37 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1167 07da55ad3051ac3cce0aae151835006c 175 Gene3D G3DSA:3.90.930.12 1 80 5.9E-21 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1167 07da55ad3051ac3cce0aae151835006c 175 PRINTS PR00059 Ribosomal protein L6 signature 139 160 2.3E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XF_1167 07da55ad3051ac3cce0aae151835006c 175 PRINTS PR00059 Ribosomal protein L6 signature 69 94 2.3E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XF_1167 07da55ad3051ac3cce0aae151835006c 175 PRINTS PR00059 Ribosomal protein L6 signature 97 113 2.3E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XF_1167 07da55ad3051ac3cce0aae151835006c 175 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 174 36.121 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XF_1167 07da55ad3051ac3cce0aae151835006c 175 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 152 160 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1167 07da55ad3051ac3cce0aae151835006c 175 SUPERFAMILY SSF56053 1 80 1.77E-18 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1167 07da55ad3051ac3cce0aae151835006c 175 SUPERFAMILY SSF56053 81 174 2.19E-34 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1167 07da55ad3051ac3cce0aae151835006c 175 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 174 9.0E-68 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XF_1167 07da55ad3051ac3cce0aae151835006c 175 Pfam PF00347 Ribosomal protein L6 11 79 7.6E-13 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1167 07da55ad3051ac3cce0aae151835006c 175 Pfam PF00347 Ribosomal protein L6 88 162 9.1E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1167 07da55ad3051ac3cce0aae151835006c 175 PIRSF PIRSF002162 1 175 9.6E-46 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1037 c8cff74d6542c511bf138f09dff88a52 446 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 50 64 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XF_1037 c8cff74d6542c511bf138f09dff88a52 446 PIRSF PIRSF001109 1 446 1.1E-181 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XF_1037 c8cff74d6542c511bf138f09dff88a52 446 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 226 242 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XF_1037 c8cff74d6542c511bf138f09dff88a52 446 Gene3D G3DSA:3.40.50.720 207 367 1.8E-221 T 14-10-2018 XF_1037 c8cff74d6542c511bf138f09dff88a52 446 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 1 438 43.709 T 14-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 XF_1037 c8cff74d6542c511bf138f09dff88a52 446 Gene3D G3DSA:3.40.50.1480 1 446 1.8E-221 T 14-10-2018 XF_1037 c8cff74d6542c511bf138f09dff88a52 446 SUPERFAMILY SSF51735 204 366 4.12E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1037 c8cff74d6542c511bf138f09dff88a52 446 SMART SM00997 204 366 2.4E-109 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XF_1037 c8cff74d6542c511bf138f09dff88a52 446 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 204 366 2.6E-80 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XF_1037 c8cff74d6542c511bf138f09dff88a52 446 SMART SM00996 1 445 6.3E-290 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XF_1037 c8cff74d6542c511bf138f09dff88a52 446 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 1 445 2.1E-133 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XF_1037 c8cff74d6542c511bf138f09dff88a52 446 SUPERFAMILY SSF52283 1 446 5.55E-103 T 14-10-2018 XF_1037 c8cff74d6542c511bf138f09dff88a52 446 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 1 438 2.1E-178 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XF_2451 46eaac0bef90f0c2db63287b6733b44d 338 Hamap MF_01805 Segregation and condensation protein A [scpA]. 83 314 22.443 T 14-10-2018 IPR003768 Segregation and condensation protein A XF_2451 46eaac0bef90f0c2db63287b6733b44d 338 Pfam PF02616 Segregation and condensation protein ScpA 100 311 4.3E-29 T 14-10-2018 IPR003768 Segregation and condensation protein A XF_0109 d675dea097e2a659647e1cd7059c701e 261 SUPERFAMILY SSF75217 1 249 2.42E-93 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases XF_0109 d675dea097e2a659647e1cd7059c701e 261 Gene3D G3DSA:3.40.1280.10 1 165 3.8E-60 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XF_0109 d675dea097e2a659647e1cd7059c701e 261 Gene3D G3DSA:1.10.1270.20 166 257 1.1E-27 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XF_0109 d675dea097e2a659647e1cd7059c701e 261 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 229 3.1E-82 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XF_0109 d675dea097e2a659647e1cd7059c701e 261 PIRSF PIRSF000386 1 256 9.6E-89 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XF_0109 d675dea097e2a659647e1cd7059c701e 261 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 261 103.107 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XF_0109 d675dea097e2a659647e1cd7059c701e 261 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 4.9E-53 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XF_1919 33eafb5ae89871cf29418597239a6e00 196 Pfam PF03358 NADPH-dependent FMN reductase 1 147 5.3E-17 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 XF_1919 33eafb5ae89871cf29418597239a6e00 196 SUPERFAMILY SSF52218 1 183 4.19E-27 T 14-10-2018 IPR029039 Flavoprotein-like superfamily XF_1919 33eafb5ae89871cf29418597239a6e00 196 Gene3D G3DSA:3.40.50.360 1 192 5.9E-24 T 14-10-2018 IPR029039 Flavoprotein-like superfamily XF_1148 6182076c72b75ad6db53cf442b4908ea 101 SUPERFAMILY SSF81333 11 86 1.7E-17 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily XF_1148 6182076c72b75ad6db53cf442b4908ea 101 Hamap MF_01396 ATP synthase subunit c [atpH]. 17 82 13.656 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1148 6182076c72b75ad6db53cf442b4908ea 101 ProSitePatterns PS00605 ATP synthase c subunit signature. 47 68 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1148 6182076c72b75ad6db53cf442b4908ea 101 Pfam PF00137 ATP synthase subunit C 18 81 3.7E-8 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 XF_1148 6182076c72b75ad6db53cf442b4908ea 101 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 27 84 8.3E-23 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 XF_1148 6182076c72b75ad6db53cf442b4908ea 101 PRINTS PR00124 ATP synthase C subunit signature 57 82 5.1E-5 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1148 6182076c72b75ad6db53cf442b4908ea 101 PRINTS PR00124 ATP synthase C subunit signature 19 38 5.1E-5 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1148 6182076c72b75ad6db53cf442b4908ea 101 PRINTS PR00124 ATP synthase C subunit signature 40 55 5.1E-5 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1148 6182076c72b75ad6db53cf442b4908ea 101 Gene3D G3DSA:1.20.20.10 10 85 4.0E-24 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1720 b138f64ad651a277f7772a266d214814 124 SUPERFAMILY SSF47413 51 116 4.83E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_1720 b138f64ad651a277f7772a266d214814 124 SMART SM00530 56 111 4.8E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_1720 b138f64ad651a277f7772a266d214814 124 Pfam PF13560 Helix-turn-helix domain 52 111 1.1E-11 T 14-10-2018 XF_1720 b138f64ad651a277f7772a266d214814 124 Gene3D G3DSA:1.10.260.40 51 123 9.9E-16 T 14-10-2018 XF_0569 850affeb44fba2e59e42968bb1ebc068 312 SUPERFAMILY SSF52402 50 278 2.72E-54 T 14-10-2018 XF_0569 850affeb44fba2e59e42968bb1ebc068 312 PIRSF PIRSF004976 14 307 3.1E-70 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 XF_0569 850affeb44fba2e59e42968bb1ebc068 312 Pfam PF01171 PP-loop family 63 226 3.2E-16 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 XF_0569 850affeb44fba2e59e42968bb1ebc068 312 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 19 293 54.821 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 XF_0569 850affeb44fba2e59e42968bb1ebc068 312 Gene3D G3DSA:3.40.50.620 24 293 3.5E-47 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_1835 bdbbdaff8a51c89c1456ca2fd1eb9a12 424 Gene3D G3DSA:3.40.50.720 17 423 1.2E-171 T 14-10-2018 XF_1835 bdbbdaff8a51c89c1456ca2fd1eb9a12 424 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 24 419 54.831 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XF_1835 bdbbdaff8a51c89c1456ca2fd1eb9a12 424 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 105 341 8.0E-108 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XF_1835 bdbbdaff8a51c89c1456ca2fd1eb9a12 424 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 25 103 4.4E-34 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XF_1835 bdbbdaff8a51c89c1456ca2fd1eb9a12 424 Pfam PF07055 Enoyl reductase FAD binding domain 350 413 3.0E-29 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XF_0423 2d6820b27b59bd539ea96a10b29202f0 1212 SUPERFAMILY SSF52540 2 852 7.09E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0423 2d6820b27b59bd539ea96a10b29202f0 1212 Pfam PF13361 UvrD-like helicase C-terminal domain 754 850 3.4E-15 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XF_0423 2d6820b27b59bd539ea96a10b29202f0 1212 Pfam PF00580 UvrD/REP helicase N-terminal domain 1 456 1.7E-41 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 XF_0423 2d6820b27b59bd539ea96a10b29202f0 1212 Gene3D G3DSA:3.90.320.10 902 1211 6.5E-66 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal XF_0423 2d6820b27b59bd539ea96a10b29202f0 1212 Gene3D G3DSA:3.40.50.300 256 461 9.9E-28 T 14-10-2018 XF_0423 2d6820b27b59bd539ea96a10b29202f0 1212 SUPERFAMILY SSF52980 913 1209 2.79E-54 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XF_0423 2d6820b27b59bd539ea96a10b29202f0 1212 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 1 1208 16.818 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 XF_0423 2d6820b27b59bd539ea96a10b29202f0 1212 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1098 1153 7.0E-5 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type XF_0423 2d6820b27b59bd539ea96a10b29202f0 1212 Pfam PF13361 UvrD-like helicase C-terminal domain 579 658 9.7E-7 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XF_0423 2d6820b27b59bd539ea96a10b29202f0 1212 Gene3D G3DSA:3.40.50.300 467 857 5.6E-96 T 14-10-2018 XF_0423 2d6820b27b59bd539ea96a10b29202f0 1212 Gene3D G3DSA:1.10.486.10 610 753 5.6E-96 T 14-10-2018 XF_1970 22e6e2c108ec721c996693764d6fb90d 338 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 195 4.9E-9 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XF_1970 22e6e2c108ec721c996693764d6fb90d 338 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 253 333 1.0E-19 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XF_1970 22e6e2c108ec721c996693764d6fb90d 338 Gene3D G3DSA:3.40.47.10 1 198 2.2E-69 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 XF_1970 22e6e2c108ec721c996693764d6fb90d 338 Gene3D G3DSA:3.40.47.10 199 338 1.4E-35 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 XF_1970 22e6e2c108ec721c996693764d6fb90d 338 SUPERFAMILY SSF53901 41 338 6.47E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 XF_2731 5c9c0f8b22f2c298aa7d6df5718de807 68 Gene3D G3DSA:3.30.420.40 6 67 1.2E-8 T 14-10-2018 XF_1706 83574dd9d9ad538fae8dc6ee35a6c126 387 Gene3D G3DSA:3.90.1340.10 133 191 1.1E-5 T 14-10-2018 IPR037053 Phage tail collar domain superfamily XF_1706 83574dd9d9ad538fae8dc6ee35a6c126 387 SUPERFAMILY SSF88874 132 277 1.44E-15 T 14-10-2018 XF_1706 83574dd9d9ad538fae8dc6ee35a6c126 387 Pfam PF07484 Phage Tail Collar Domain 139 191 2.6E-12 T 14-10-2018 IPR011083 Phage tail collar domain XF_0276 c800cef7af1df02198ebdecfeb03ee63 471 Gene3D G3DSA:3.40.1190.10 92 335 1.5E-59 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XF_0276 c800cef7af1df02198ebdecfeb03ee63 471 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 2 471 54.287 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 XF_0276 c800cef7af1df02198ebdecfeb03ee63 471 Pfam PF08245 Mur ligase middle domain 109 313 6.3E-24 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XF_0276 c800cef7af1df02198ebdecfeb03ee63 471 SUPERFAMILY SSF53244 333 469 2.09E-32 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XF_0276 c800cef7af1df02198ebdecfeb03ee63 471 SUPERFAMILY SSF53623 96 330 6.8E-51 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XF_0276 c800cef7af1df02198ebdecfeb03ee63 471 Gene3D G3DSA:3.40.50.720 1 91 1.9E-27 T 14-10-2018 XF_0276 c800cef7af1df02198ebdecfeb03ee63 471 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 3 471 1.2E-179 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 XF_0276 c800cef7af1df02198ebdecfeb03ee63 471 Gene3D G3DSA:3.90.190.20 336 471 2.0E-25 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XF_0276 c800cef7af1df02198ebdecfeb03ee63 471 Pfam PF01225 Mur ligase family, catalytic domain 4 98 6.8E-12 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XF_0276 c800cef7af1df02198ebdecfeb03ee63 471 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 402 3.9E-9 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XF_0276 c800cef7af1df02198ebdecfeb03ee63 471 SUPERFAMILY SSF51984 2 91 9.03E-16 T 14-10-2018 XF_1450 38008665ad69d0bbcf73579af7cf9e3f 784 Gene3D G3DSA:3.40.50.300 391 693 2.4E-114 T 14-10-2018 XF_1450 38008665ad69d0bbcf73579af7cf9e3f 784 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 33 204 7.1E-41 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region XF_1450 38008665ad69d0bbcf73579af7cf9e3f 784 Gene3D G3DSA:1.10.10.10 722 784 1.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1450 38008665ad69d0bbcf73579af7cf9e3f 784 SMART SM00382 429 628 0.0016 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1450 38008665ad69d0bbcf73579af7cf9e3f 784 Pfam PF09397 Ftsk gamma domain 720 780 2.9E-27 T 14-10-2018 IPR018541 FtsK gamma domain XF_1450 38008665ad69d0bbcf73579af7cf9e3f 784 SUPERFAMILY SSF52540 366 679 2.32E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1450 38008665ad69d0bbcf73579af7cf9e3f 784 Pfam PF01580 FtsK/SpoIIIE family 394 607 8.7E-63 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 XF_1450 38008665ad69d0bbcf73579af7cf9e3f 784 Gene3D G3DSA:3.30.980.40 286 390 1.6E-32 T 14-10-2018 XF_1450 38008665ad69d0bbcf73579af7cf9e3f 784 SUPERFAMILY SSF46785 718 782 3.33E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_1450 38008665ad69d0bbcf73579af7cf9e3f 784 SMART SM00843 718 783 3.3E-40 T 14-10-2018 IPR018541 FtsK gamma domain XF_1434 8ca0d4b32b04ccf9a3033ccf9af20328 311 SUPERFAMILY SSF50494 64 268 2.59E-12 T 14-10-2018 IPR009003 Peptidase S1, PA clan XF_1434 8ca0d4b32b04ccf9a3033ccf9af20328 311 Gene3D G3DSA:2.40.10.10 87 199 4.5E-21 T 14-10-2018 XF_1434 8ca0d4b32b04ccf9a3033ccf9af20328 311 Gene3D G3DSA:2.40.10.10 202 310 1.5E-6 T 14-10-2018 XF_0992 b2a7e0288efa2fe431035cdd65ea1d39 327 Gene3D G3DSA:3.40.50.1820 44 311 1.3E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0992 b2a7e0288efa2fe431035cdd65ea1d39 327 SUPERFAMILY SSF53474 50 286 1.77E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0992 b2a7e0288efa2fe431035cdd65ea1d39 327 Pfam PF12146 Serine aminopeptidase, S33 63 191 4.1E-9 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 XF_0678 5982401301e4ea98dd1a9be533db9887 387 Gene3D G3DSA:1.10.443.10 175 353 9.5E-22 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XF_0678 5982401301e4ea98dd1a9be533db9887 387 SUPERFAMILY SSF56349 75 337 5.89E-32 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XF_0678 5982401301e4ea98dd1a9be533db9887 387 Pfam PF00589 Phage integrase family 183 328 2.1E-10 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XF_0678 5982401301e4ea98dd1a9be533db9887 387 Gene3D G3DSA:1.10.150.130 48 162 4.6E-6 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal XF_0795 d4d0e40c3e10c5c4a1fb6153432e876e 361 Pfam PF00953 Glycosyl transferase family 4 99 285 2.4E-34 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 XF_0795 d4d0e40c3e10c5c4a1fb6153432e876e 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0795 d4d0e40c3e10c5c4a1fb6153432e876e 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 24.52 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0795 d4d0e40c3e10c5c4a1fb6153432e876e 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 1.4E-129 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0795 d4d0e40c3e10c5c4a1fb6153432e876e 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_1405 5d40d1b1f406050912eaa755f8191ee5 290 Gene3D G3DSA:3.40.50.300 1 149 4.7E-8 T 14-10-2018 XF_1405 5d40d1b1f406050912eaa755f8191ee5 290 Pfam PF03668 P-loop ATPase protein family 8 290 1.1E-92 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 XF_1405 5d40d1b1f406050912eaa755f8191ee5 290 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 6 290 37.629 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 XF_1405 5d40d1b1f406050912eaa755f8191ee5 290 PIRSF PIRSF005052 6 290 7.5E-113 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 XF_1405 5d40d1b1f406050912eaa755f8191ee5 290 SUPERFAMILY SSF52540 8 158 2.77E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1914 219ed40ec4a5ff73acaff6c3e59d1a46 498 Pfam PF00425 chorismate binding enzyme 223 477 1.6E-79 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal XF_1914 219ed40ec4a5ff73acaff6c3e59d1a46 498 PRINTS PR00095 Anthranilate synthase component I signature 338 351 6.4E-14 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_1914 219ed40ec4a5ff73acaff6c3e59d1a46 498 PRINTS PR00095 Anthranilate synthase component I signature 434 448 6.4E-14 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_1914 219ed40ec4a5ff73acaff6c3e59d1a46 498 PRINTS PR00095 Anthranilate synthase component I signature 418 432 6.4E-14 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_1914 219ed40ec4a5ff73acaff6c3e59d1a46 498 PRINTS PR00095 Anthranilate synthase component I signature 324 337 6.4E-14 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_1914 219ed40ec4a5ff73acaff6c3e59d1a46 498 Gene3D G3DSA:3.60.120.10 8 491 1.6E-116 T 14-10-2018 IPR005801 ADC synthase GO:0009058 XF_1914 219ed40ec4a5ff73acaff6c3e59d1a46 498 Pfam PF04715 Anthranilate synthase component I, N terminal region 30 179 9.5E-12 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_1914 219ed40ec4a5ff73acaff6c3e59d1a46 498 SUPERFAMILY SSF56322 20 485 3.66E-113 T 14-10-2018 IPR005801 ADC synthase GO:0009058 XF_0946 ea4ce009ec0d5c076cba28d1f041d7bf 424 Gene3D G3DSA:3.90.1150.10 18 400 9.4E-183 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XF_0946 ea4ce009ec0d5c076cba28d1f041d7bf 424 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 228 244 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XF_0946 ea4ce009ec0d5c076cba28d1f041d7bf 424 SUPERFAMILY SSF53383 14 423 2.61E-174 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XF_0946 ea4ce009ec0d5c076cba28d1f041d7bf 424 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 14 424 51.664 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XF_0946 ea4ce009ec0d5c076cba28d1f041d7bf 424 PIRSF PIRSF000412 6 423 3.7E-164 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XF_0946 ea4ce009ec0d5c076cba28d1f041d7bf 424 Pfam PF00464 Serine hydroxymethyltransferase 16 393 1.5E-177 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XF_0946 ea4ce009ec0d5c076cba28d1f041d7bf 424 Gene3D G3DSA:3.40.640.10 44 296 9.4E-183 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XF_1254 129c7adcdc25d0a0e055acc69a9bfebd 280 SUPERFAMILY SSF46689 228 276 7.62E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XF_1254 129c7adcdc25d0a0e055acc69a9bfebd 280 Pfam PF12852 Cupin 7 161 5.5E-26 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain XF_1254 129c7adcdc25d0a0e055acc69a9bfebd 280 Gene3D G3DSA:1.10.10.60 236 279 4.6E-10 T 14-10-2018 XF_1254 129c7adcdc25d0a0e055acc69a9bfebd 280 Gene3D G3DSA:1.10.10.60 177 235 1.3E-11 T 14-10-2018 XF_1254 129c7adcdc25d0a0e055acc69a9bfebd 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 270 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 XF_1254 129c7adcdc25d0a0e055acc69a9bfebd 280 SUPERFAMILY SSF46689 175 226 3.85E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XF_1254 129c7adcdc25d0a0e055acc69a9bfebd 280 SMART SM00342 192 274 9.5E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XF_1254 129c7adcdc25d0a0e055acc69a9bfebd 280 Pfam PF12833 Helix-turn-helix domain 198 276 1.9E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XF_1212 6655147af065cee56005bc0212fe34dd 164 SUPERFAMILY SSF50891 4 136 1.13E-56 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily XF_1212 6655147af065cee56005bc0212fe34dd 164 PIRSF PIRSF001467 2 154 3.4E-54 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 XF_1212 6655147af065cee56005bc0212fe34dd 164 Gene3D G3DSA:2.40.100.10 3 144 9.1E-60 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily XF_1212 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 1.2E-35 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XF_1212 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 98 1.2E-35 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XF_1212 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 111 126 1.2E-35 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XF_1212 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 56 1.2E-35 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XF_1212 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 110 1.2E-35 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XF_1212 6655147af065cee56005bc0212fe34dd 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 7 134 3.1E-49 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XF_1212 6655147af065cee56005bc0212fe34dd 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 39 56 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 XF_1996 094bc9c5675e383131d370569242d4f4 126 SMART SM00530 9 65 4.8E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_1996 094bc9c5675e383131d370569242d4f4 126 Pfam PF01381 Helix-turn-helix 10 65 1.4E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_1996 094bc9c5675e383131d370569242d4f4 126 Gene3D G3DSA:1.10.260.40 3 68 3.6E-16 T 14-10-2018 XF_1996 094bc9c5675e383131d370569242d4f4 126 SUPERFAMILY SSF47413 4 68 6.4E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_2327 deb1bb4c84c42efc178dc6ec443f5ff6 400 PRINTS PR01374 Gram-negative bacterial tonB protein signature 342 360 4.5E-9 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XF_2327 deb1bb4c84c42efc178dc6ec443f5ff6 400 PRINTS PR01374 Gram-negative bacterial tonB protein signature 361 378 4.5E-9 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XF_2327 deb1bb4c84c42efc178dc6ec443f5ff6 400 PRINTS PR01374 Gram-negative bacterial tonB protein signature 321 342 4.5E-9 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XF_2327 deb1bb4c84c42efc178dc6ec443f5ff6 400 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 325 385 1.3E-18 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 XF_2327 deb1bb4c84c42efc178dc6ec443f5ff6 400 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 327 397 2.4E-20 T 14-10-2018 IPR006260 TonB/TolA, C-terminal XF_2327 deb1bb4c84c42efc178dc6ec443f5ff6 400 SUPERFAMILY SSF74653 319 385 2.22E-20 T 14-10-2018 XF_2327 deb1bb4c84c42efc178dc6ec443f5ff6 400 Gene3D G3DSA:3.30.2420.10 320 394 1.2E-21 T 14-10-2018 XF_1575 82d978d64a73dcc9c103c2c0ef230160 397 PIRSF PIRSF029215 1 397 6.7E-137 T 14-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 XF_1575 82d978d64a73dcc9c103c2c0ef230160 397 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 12 176 6.7E-61 T 14-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 XF_1680 82d978d64a73dcc9c103c2c0ef230160 397 PIRSF PIRSF029215 1 397 6.7E-137 T 14-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 XF_1680 82d978d64a73dcc9c103c2c0ef230160 397 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 12 176 6.7E-61 T 14-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 XF_2558 f5fe791025056e173441118880554e07 1167 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1157 0.0 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 XF_2558 f5fe791025056e173441118880554e07 1167 PIRSF PIRSF005719 1 1164 1.8E-263 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein XF_2558 f5fe791025056e173441118880554e07 1167 Gene3D G3DSA:3.40.50.300 933 1167 3.5E-45 T 14-10-2018 XF_2558 f5fe791025056e173441118880554e07 1167 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1159 22.38 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 XF_2558 f5fe791025056e173441118880554e07 1167 Pfam PF06470 SMC proteins Flexible Hinge Domain 526 592 7.0E-5 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 XF_2558 f5fe791025056e173441118880554e07 1167 SMART SM00968 521 619 4.4E-7 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 XF_2558 f5fe791025056e173441118880554e07 1167 SUPERFAMILY SSF52540 1 1159 1.12E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2558 f5fe791025056e173441118880554e07 1167 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1150 1.8E-67 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal XF_2558 f5fe791025056e173441118880554e07 1167 Gene3D G3DSA:3.40.50.300 1 244 1.1E-53 T 14-10-2018 XF_2558 f5fe791025056e173441118880554e07 1167 SUPERFAMILY SSF75553 488 667 5.75E-6 T 14-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 XF_2574 cb28fcf970d8bfda39499b91b80dabd6 227 Pfam PF01569 PAP2 superfamily 110 218 6.7E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XF_2574 cb28fcf970d8bfda39499b91b80dabd6 227 SUPERFAMILY SSF48317 19 221 8.37E-35 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XF_2574 cb28fcf970d8bfda39499b91b80dabd6 227 Gene3D G3DSA:1.20.144.10 135 227 9.8E-19 T 14-10-2018 XF_2574 cb28fcf970d8bfda39499b91b80dabd6 227 Gene3D G3DSA:1.20.144.10 20 134 2.4E-6 T 14-10-2018 XF_2574 cb28fcf970d8bfda39499b91b80dabd6 227 SMART SM00014 104 213 4.3E-13 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XF_1675 76db20d79cf9d045cf0cb5515682a3d1 183 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 23 173 4.0E-58 T 14-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit XF_1675 76db20d79cf9d045cf0cb5515682a3d1 183 Pfam PF17289 Terminase RNaseH-like domain 11 169 3.1E-15 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like XF_1570 76db20d79cf9d045cf0cb5515682a3d1 183 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 23 173 4.0E-58 T 14-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit XF_1570 76db20d79cf9d045cf0cb5515682a3d1 183 Pfam PF17289 Terminase RNaseH-like domain 11 169 3.1E-15 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like XF_2634 549c4033f92763a10e0188371d2f200b 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 95 2.0E-12 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2634 549c4033f92763a10e0188371d2f200b 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 1.6E-17 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2634 549c4033f92763a10e0188371d2f200b 122 SUPERFAMILY SSF48300 4 59 1.44E-16 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2634 549c4033f92763a10e0188371d2f200b 122 SUPERFAMILY SSF54736 52 122 3.49E-22 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XF_2634 549c4033f92763a10e0188371d2f200b 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 122 8.4E-25 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2634 549c4033f92763a10e0188371d2f200b 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 2.3E-41 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2634 549c4033f92763a10e0188371d2f200b 122 Gene3D G3DSA:3.30.1390.10 53 122 2.5E-26 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XF_2634 549c4033f92763a10e0188371d2f200b 122 Gene3D G3DSA:1.20.5.710 2 52 6.7E-20 T 14-10-2018 XF_2634 549c4033f92763a10e0188371d2f200b 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 23.786 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1825 ff92541b38c6da719b7fe77d93f408ce 332 SUPERFAMILY SSF51735 1 326 6.63E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1825 ff92541b38c6da719b7fe77d93f408ce 332 Gene3D G3DSA:3.40.50.720 1 332 1.0E-75 T 14-10-2018 XF_1825 ff92541b38c6da719b7fe77d93f408ce 332 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 4 249 1.1E-49 T 14-10-2018 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 XF_1154 fe1f14e1eba6b95aa6980e30535eedea 103 SUPERFAMILY SSF54189 10 102 4.32E-27 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1154 fe1f14e1eba6b95aa6980e30535eedea 103 Gene3D G3DSA:3.30.70.330 6 102 8.1E-31 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily XF_1154 fe1f14e1eba6b95aa6980e30535eedea 103 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 12 102 20.808 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 XF_1154 fe1f14e1eba6b95aa6980e30535eedea 103 Pfam PF00276 Ribosomal protein L23 14 99 8.2E-27 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 XF_0782 d579ccd7a76579daaada36d277847c48 75 Gene3D G3DSA:3.10.20.30 10 75 3.5E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily XF_0782 d579ccd7a76579daaada36d277847c48 75 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 12 75 4.8E-20 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis XF_0782 d579ccd7a76579daaada36d277847c48 75 SUPERFAMILY SSF54285 10 75 2.36E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp XF_0782 d579ccd7a76579daaada36d277847c48 75 Pfam PF02597 ThiS family 12 75 8.7E-16 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 XF_1741 3fc07e53b3d2ab77ed2d56d3c2d2484c 294 Pfam PF00106 short chain dehydrogenase 53 225 6.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1741 3fc07e53b3d2ab77ed2d56d3c2d2484c 294 SUPERFAMILY SSF51735 52 258 3.17E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1741 3fc07e53b3d2ab77ed2d56d3c2d2484c 294 Gene3D G3DSA:3.40.50.720 45 292 1.5E-37 T 14-10-2018 XF_1741 3fc07e53b3d2ab77ed2d56d3c2d2484c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 52 69 1.6E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1741 3fc07e53b3d2ab77ed2d56d3c2d2484c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 133 1.6E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1741 3fc07e53b3d2ab77ed2d56d3c2d2484c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 225 1.6E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1741 3fc07e53b3d2ab77ed2d56d3c2d2484c 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 208 1.6E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1886 7d9f1bf9505fa775e7cfb81d87180301 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 198 1.1E-55 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XF_1886 7d9f1bf9505fa775e7cfb81d87180301 214 PIRSF PIRSF000709 1 187 1.0E-11 T 14-10-2018 XF_1886 7d9f1bf9505fa775e7cfb81d87180301 214 SUPERFAMILY SSF53254 1 203 2.36E-54 T 14-10-2018 IPR029033 Histidine phosphatase superfamily XF_1886 7d9f1bf9505fa775e7cfb81d87180301 214 SMART SM00855 2 158 6.2E-21 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XF_1886 7d9f1bf9505fa775e7cfb81d87180301 214 Gene3D G3DSA:3.40.50.1240 1 212 1.1E-54 T 14-10-2018 IPR029033 Histidine phosphatase superfamily XF_1886 7d9f1bf9505fa775e7cfb81d87180301 214 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 133 292 3.7E-64 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 Hamap MF_01576 Bifunctional protein FolD [folD]. 12 294 36.736 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 271 279 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 SUPERFAMILY SSF53223 12 131 1.73E-36 T 14-10-2018 XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 Gene3D G3DSA:3.40.50.10860 17 287 1.0E-99 T 14-10-2018 XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 43 65 1.1E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 119 140 1.1E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 164 184 1.1E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 267 285 1.1E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 250 266 1.1E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 84 111 1.1E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 215 244 1.1E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 SUPERFAMILY SSF51735 132 291 2.43E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 14 130 9.0E-35 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XF_2431 d8967cc9699fffaafd3195a8179f3bfd 295 Gene3D G3DSA:3.40.50.720 15 270 1.0E-99 T 14-10-2018 XF_1968 ab82bb6d3210cee8d49ea2137afce143 534 SUPERFAMILY SSF53335 58 380 6.14E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_1968 ab82bb6d3210cee8d49ea2137afce143 534 Pfam PF01555 DNA methylase 85 378 5.3E-42 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XF_1968 ab82bb6d3210cee8d49ea2137afce143 534 PIRSF PIRSF015855 3 523 1.4E-150 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XF_1968 ab82bb6d3210cee8d49ea2137afce143 534 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 327 349 3.1E-17 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XF_1968 ab82bb6d3210cee8d49ea2137afce143 534 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 85 97 3.1E-17 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XF_1968 ab82bb6d3210cee8d49ea2137afce143 534 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 126 145 3.1E-17 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XF_1968 ab82bb6d3210cee8d49ea2137afce143 534 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 350 364 3.1E-17 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XF_2735 b7c8e3e7ed430069ea80bb8c58e8a455 401 PIRSF PIRSF028408 1 399 4.6E-143 T 14-10-2018 IPR014544 Uncharacterised conserved protein UCP028408 XF_2735 b7c8e3e7ed430069ea80bb8c58e8a455 401 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 211 389 8.9E-63 T 14-10-2018 IPR024534 Domain of unknown function DUF2220 XF_2735 b7c8e3e7ed430069ea80bb8c58e8a455 401 Pfam PF11795 Uncharacterized protein conserved in bacteria N-term (DUF3322) 6 188 1.5E-59 T 14-10-2018 IPR024537 Domain of unknown function DUF3322 XF_2444 80920dc85923f8a133c790207416f8f8 405 Pfam PF01963 TraB family 19 240 9.8E-27 T 14-10-2018 IPR002816 Pheromone shutdown, TraB XF_2444 80920dc85923f8a133c790207416f8f8 405 TIGRFAM TIGR00261 traB: TraB family protein 28 401 8.3E-80 T 14-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 Gene3D G3DSA:2.60.40.10 623 736 8.4E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 SMART SM01217 657 726 8.1E-27 T 14-10-2018 IPR026891 Fibronectin type III-like domain XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 388 620 3.8E-53 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 Gene3D G3DSA:3.40.50.1700 374 622 1.1E-76 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 Pfam PF14310 Fibronectin type III-like domain 657 724 3.1E-17 T 14-10-2018 IPR026891 Fibronectin type III-like domain XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 SUPERFAMILY SSF51445 16 387 1.16E-98 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 Gene3D G3DSA:3.20.20.300 18 368 5.7E-114 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 30 347 1.8E-68 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 SUPERFAMILY SSF52279 388 623 5.36E-53 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 162 178 6.7E-19 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 199 215 6.7E-19 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 116 135 6.7E-19 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 97 113 6.7E-19 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 269 287 6.7E-19 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XF_0439 379ebb123f580c0406c3dcf8e54cafaf 740 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 269 286 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 XF_0082 e841663cae196ed96b17305a8e3b1ff0 266 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 109 126 - T 14-10-2018 IPR018046 Pili assembly chaperone, conserved site XF_0082 e841663cae196ed96b17305a8e3b1ff0 266 SUPERFAMILY SSF49354 27 166 8.14E-44 T 14-10-2018 IPR008962 PapD-like superfamily XF_0082 e841663cae196ed96b17305a8e3b1ff0 266 Gene3D G3DSA:2.60.40.10 169 265 1.5E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold XF_0082 e841663cae196ed96b17305a8e3b1ff0 266 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 31 167 5.0E-48 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 XF_0082 e841663cae196ed96b17305a8e3b1ff0 266 Gene3D G3DSA:2.60.40.10 33 167 1.9E-45 T 14-10-2018 IPR013783 Immunoglobulin-like fold XF_0082 e841663cae196ed96b17305a8e3b1ff0 266 SUPERFAMILY SSF49584 160 258 1.09E-15 T 14-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XF_0082 e841663cae196ed96b17305a8e3b1ff0 266 PRINTS PR00969 Pili chaperone signature 184 199 9.5E-36 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XF_0082 e841663cae196ed96b17305a8e3b1ff0 266 PRINTS PR00969 Pili chaperone signature 110 127 9.5E-36 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XF_0082 e841663cae196ed96b17305a8e3b1ff0 266 PRINTS PR00969 Pili chaperone signature 81 102 9.5E-36 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XF_0082 e841663cae196ed96b17305a8e3b1ff0 266 PRINTS PR00969 Pili chaperone signature 148 163 9.5E-36 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XF_0082 e841663cae196ed96b17305a8e3b1ff0 266 PRINTS PR00969 Pili chaperone signature 32 41 9.5E-36 T 14-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XF_0082 e841663cae196ed96b17305a8e3b1ff0 266 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 189 256 1.2E-14 T 14-10-2018 IPR016148 Pili assembly chaperone, C-terminal XF_2559 410ddb3339cf8f160ba17ae4239a8547 149 Gene3D G3DSA:3.10.430.100 61 147 3.5E-23 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily XF_2559 410ddb3339cf8f160ba17ae4239a8547 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 6.7E-42 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2559 410ddb3339cf8f160ba17ae4239a8547 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.143 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2559 410ddb3339cf8f160ba17ae4239a8547 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 7.2E-21 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal XF_2559 410ddb3339cf8f160ba17ae4239a8547 149 Gene3D G3DSA:3.40.5.10 1 50 5.2E-22 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2559 410ddb3339cf8f160ba17ae4239a8547 149 SUPERFAMILY SSF55653 61 146 1.44E-21 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily XF_2559 410ddb3339cf8f160ba17ae4239a8547 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2559 410ddb3339cf8f160ba17ae4239a8547 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 9.0E-21 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2559 410ddb3339cf8f160ba17ae4239a8547 149 SUPERFAMILY SSF55658 1 57 1.45E-17 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal XF_0908 cb334ca3b5deba6e73151b7589be4687 210 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 9 44 1.4E-8 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 XF_0908 cb334ca3b5deba6e73151b7589be4687 210 SUPERFAMILY SSF50022 35 199 2.81E-37 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 XF_0908 cb334ca3b5deba6e73151b7589be4687 210 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 13 198 7.9E-66 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 XF_0908 cb334ca3b5deba6e73151b7589be4687 210 Pfam PF00355 Rieske [2Fe-2S] domain 105 182 4.7E-10 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 XF_0908 cb334ca3b5deba6e73151b7589be4687 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 157 169 2.4E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 XF_0908 cb334ca3b5deba6e73151b7589be4687 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 126 137 2.4E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 XF_0908 cb334ca3b5deba6e73151b7589be4687 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 170 182 2.4E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 XF_0908 cb334ca3b5deba6e73151b7589be4687 210 Gene3D G3DSA:2.102.10.10 47 198 5.9E-39 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 XF_1555 36725974dc3af87eed0429c97f2395c7 284 Gene3D G3DSA:1.10.443.10 105 234 2.8E-16 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XF_1555 36725974dc3af87eed0429c97f2395c7 284 SUPERFAMILY SSF56349 1 228 1.0E-35 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XF_1555 36725974dc3af87eed0429c97f2395c7 284 Gene3D G3DSA:1.10.150.130 1 104 2.7E-5 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal XF_1555 36725974dc3af87eed0429c97f2395c7 284 Pfam PF00589 Phage integrase family 110 222 9.0E-7 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XF_2491 90124793756145b93ecd2705436f9b52 133 SMART SM00530 73 127 6.8E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_2491 90124793756145b93ecd2705436f9b52 133 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 48 3.5E-13 T 14-10-2018 IPR022453 Zinc finger, MqsA-type XF_2491 90124793756145b93ecd2705436f9b52 133 Gene3D G3DSA:1.20.58.720 1 63 9.1E-29 T 14-10-2018 XF_2491 90124793756145b93ecd2705436f9b52 133 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 1 131 2.3E-63 T 14-10-2018 IPR032758 Antitoxin MqsA/HigA-2 XF_2491 90124793756145b93ecd2705436f9b52 133 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 3 130 7.2E-44 T 14-10-2018 IPR022452 Antitoxin MqsA XF_2491 90124793756145b93ecd2705436f9b52 133 SUPERFAMILY SSF47413 69 127 2.12E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_2491 90124793756145b93ecd2705436f9b52 133 Gene3D G3DSA:1.10.260.40 64 131 2.2E-21 T 14-10-2018 XF_1493 e31bb49726a91f6b4a9291ef8370ff12 138 Pfam PF00816 H-NS histone family 18 116 9.0E-17 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 XF_1493 e31bb49726a91f6b4a9291ef8370ff12 138 Gene3D G3DSA:3.30.160.510 62 129 1.0E-23 T 14-10-2018 XF_1493 e31bb49726a91f6b4a9291ef8370ff12 138 SUPERFAMILY SSF81273 87 116 1.73E-5 T 14-10-2018 XF_1493 e31bb49726a91f6b4a9291ef8370ff12 138 SMART SM00528 83 126 3.2E-8 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 XF_1957 da8b508c69bb6f6da27088ad2225bfba 299 Gene3D G3DSA:3.30.1150.10 83 289 2.1E-20 T 14-10-2018 XF_1957 da8b508c69bb6f6da27088ad2225bfba 299 SUPERFAMILY SSF74653 181 294 1.44E-21 T 14-10-2018 XF_1957 da8b508c69bb6f6da27088ad2225bfba 299 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 214 290 8.8E-20 T 14-10-2018 IPR006260 TonB/TolA, C-terminal XF_1957 da8b508c69bb6f6da27088ad2225bfba 299 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 212 281 2.3E-17 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 SMART SM00487 61 257 2.2E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 Gene3D G3DSA:3.40.50.300 248 379 1.3E-35 T 14-10-2018 XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 SMART SM00956 451 554 2.7E-59 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 SMART SM00341 571 644 5.8E-11 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 SUPERFAMILY SSF47819 572 641 2.18E-21 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 Pfam PF09382 RQC domain 448 554 2.6E-43 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 Pfam PF16124 RecQ zinc-binding 382 444 1.3E-19 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 Gene3D G3DSA:1.10.10.10 381 566 1.2E-53 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 Pfam PF00570 HRDC domain 574 641 1.4E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 SUPERFAMILY SSF52540 48 236 1.24E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 53 643 3.3E-281 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 SMART SM00490 289 370 5.5E-23 T 14-10-2018 IPR001650 Helicase, C-terminal XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 Pfam PF00270 DEAD/DEAH box helicase 69 224 3.9E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 Pfam PF00271 Helicase conserved C-terminal domain 266 369 9.5E-13 T 14-10-2018 IPR001650 Helicase, C-terminal XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 55 503 4.5E-155 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 Gene3D G3DSA:3.40.50.300 43 247 9.3E-81 T 14-10-2018 XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 SUPERFAMILY SSF52540 247 499 1.59E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1381 ceff34e1612ce320760b60b4c16cb8b5 645 Gene3D G3DSA:1.10.150.80 571 644 1.8E-21 T 14-10-2018 XF_2485 e40e45118d67605e545651dda1435c11 396 Pfam PF17482 Phage tail sheath C-terminal domain 286 387 7.6E-20 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain XF_2485 e40e45118d67605e545651dda1435c11 396 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 113 285 2.8E-35 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain XF_0727 e40e45118d67605e545651dda1435c11 396 Pfam PF17482 Phage tail sheath C-terminal domain 286 387 7.6E-20 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain XF_0727 e40e45118d67605e545651dda1435c11 396 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 113 285 2.8E-35 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain XF_2522 613ede3c991e991b8b1fd44d4ac7c6ba 425 Pfam PF10926 Protein of unknown function (DUF2800) 4 391 1.2E-117 T 14-10-2018 IPR021229 Protein of unknown function DUF2800 XF_0894 fa7ffa17a467fff3cc02d90d1f0a805a 282 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 282 9.2E-145 T 14-10-2018 IPR008487 Protein of unknown function DUF769 XF_0106 f2e86e496132f6b09b847e532df27384 460 SMART SM00812 33 357 1.2E-15 T 14-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XF_0106 f2e86e496132f6b09b847e532df27384 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 143 162 1.1E-6 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XF_0106 f2e86e496132f6b09b847e532df27384 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 95 111 1.1E-6 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XF_0106 f2e86e496132f6b09b847e532df27384 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 283 304 1.1E-6 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XF_0106 f2e86e496132f6b09b847e532df27384 460 Gene3D G3DSA:2.60.120.260 341 453 2.6E-24 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily XF_0106 f2e86e496132f6b09b847e532df27384 460 SUPERFAMILY SSF49785 347 452 6.26E-13 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily XF_0106 f2e86e496132f6b09b847e532df27384 460 Gene3D G3DSA:3.20.20.80 22 332 2.0E-113 T 14-10-2018 XF_0106 f2e86e496132f6b09b847e532df27384 460 Pfam PF00754 F5/8 type C domain 348 445 9.6E-12 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain XF_0106 f2e86e496132f6b09b847e532df27384 460 SUPERFAMILY SSF51445 30 326 3.68E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily XF_0106 f2e86e496132f6b09b847e532df27384 460 Pfam PF01120 Alpha-L-fucosidase 70 324 2.1E-41 T 14-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XF_2474 6268c8e34dc68525d635944d0c4d29aa 357 SUPERFAMILY SSF102114 127 346 1.12E-20 T 14-10-2018 XF_2474 6268c8e34dc68525d635944d0c4d29aa 357 Pfam PF13394 4Fe-4S single cluster domain 137 208 3.5E-5 T 14-10-2018 XF_2474 6268c8e34dc68525d635944d0c4d29aa 357 PIRSF PIRSF004911 16 357 1.4E-102 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase XF_2474 6268c8e34dc68525d635944d0c4d29aa 357 TIGRFAM TIGR00238 TIGR00238: KamA family protein 37 350 2.4E-86 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase XF_2474 6268c8e34dc68525d635944d0c4d29aa 357 Gene3D G3DSA:3.20.20.70 72 356 1.2E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_2474 6268c8e34dc68525d635944d0c4d29aa 357 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 37 356 7.3E-134 T 14-10-2018 IPR022462 Lysine-2,3-aminomutase-like XF_1481 7822053d0d683508a40f2523cab9bd5a 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 73 87 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XF_1481 7822053d0d683508a40f2523cab9bd5a 284 Gene3D G3DSA:3.10.310.10 124 271 3.3E-88 T 14-10-2018 XF_1481 7822053d0d683508a40f2523cab9bd5a 284 Pfam PF01678 Diaminopimelate epimerase 162 273 5.5E-23 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XF_1481 7822053d0d683508a40f2523cab9bd5a 284 Pfam PF01678 Diaminopimelate epimerase 12 131 2.3E-21 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XF_1481 7822053d0d683508a40f2523cab9bd5a 284 SUPERFAMILY SSF54506 149 282 1.73E-46 T 14-10-2018 XF_1481 7822053d0d683508a40f2523cab9bd5a 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 10 284 35.414 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XF_1481 7822053d0d683508a40f2523cab9bd5a 284 SUPERFAMILY SSF54506 10 139 1.57E-39 T 14-10-2018 XF_1481 7822053d0d683508a40f2523cab9bd5a 284 Gene3D G3DSA:3.10.310.10 12 280 3.3E-88 T 14-10-2018 XF_1481 7822053d0d683508a40f2523cab9bd5a 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 11 281 4.5E-74 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XF_0095 153afcd98476cac1ca5d2b6455489a53 101 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 100 4.0E-47 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 XF_0095 153afcd98476cac1ca5d2b6455489a53 101 SUPERFAMILY SSF75471 4 96 1.02E-24 T 14-10-2018 IPR035920 YhbY-like superfamily XF_0095 153afcd98476cac1ca5d2b6455489a53 101 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 88 3.5E-17 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 XF_0095 153afcd98476cac1ca5d2b6455489a53 101 Gene3D G3DSA:3.30.110.60 3 101 1.5E-27 T 14-10-2018 IPR035920 YhbY-like superfamily XF_0095 153afcd98476cac1ca5d2b6455489a53 101 SMART SM01103 5 88 1.1E-31 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 XF_2298 3dab682e445d92b7895877d4e151608d 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 145 1.1E-34 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I XF_2298 3dab682e445d92b7895877d4e151608d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 4.9E-23 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 XF_2298 3dab682e445d92b7895877d4e151608d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 122 137 4.9E-23 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 XF_2298 3dab682e445d92b7895877d4e151608d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 4.9E-23 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 XF_2298 3dab682e445d92b7895877d4e151608d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 4.9E-23 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 XF_2298 3dab682e445d92b7895877d4e151608d 154 SMART SM00226 1 150 4.2E-40 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I XF_2298 3dab682e445d92b7895877d4e151608d 154 Gene3D G3DSA:3.40.50.2300 1 154 6.4E-49 T 14-10-2018 XF_2298 3dab682e445d92b7895877d4e151608d 154 SUPERFAMILY SSF52788 1 151 2.09E-46 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily XF_0632 ba885bf05ff3502f602285c9f7f284bf 114 SUPERFAMILY SSF46955 44 106 1.03E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily XF_0632 ba885bf05ff3502f602285c9f7f284bf 114 Pfam PF12728 Helix-turn-helix domain 44 96 5.3E-7 T 14-10-2018 XF_0411 5a26d429c91016b2f88aabcad01d728e 584 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 262 4.6E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XF_0411 5a26d429c91016b2f88aabcad01d728e 584 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 398 566 1.8E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XF_0411 5a26d429c91016b2f88aabcad01d728e 584 SUPERFAMILY SSF161098 376 569 7.46E-20 T 14-10-2018 IPR035906 MetI-like superfamily XF_0411 5a26d429c91016b2f88aabcad01d728e 584 Gene3D G3DSA:1.10.3720.10 368 573 2.6E-18 T 14-10-2018 IPR035906 MetI-like superfamily XF_0411 5a26d429c91016b2f88aabcad01d728e 584 Gene3D G3DSA:1.10.3720.10 69 269 6.0E-24 T 14-10-2018 IPR035906 MetI-like superfamily XF_0411 5a26d429c91016b2f88aabcad01d728e 584 SUPERFAMILY SSF161098 71 264 2.22E-20 T 14-10-2018 IPR035906 MetI-like superfamily XF_1151 1b58b754489e7bbe112a0b792a8abde9 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 23.762 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1151 1b58b754489e7bbe112a0b792a8abde9 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.6E-11 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1151 1b58b754489e7bbe112a0b792a8abde9 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.6E-11 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1151 1b58b754489e7bbe112a0b792a8abde9 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.6E-11 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1151 1b58b754489e7bbe112a0b792a8abde9 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1151 1b58b754489e7bbe112a0b792a8abde9 103 SUPERFAMILY SSF54999 5 102 7.46E-33 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily XF_1151 1b58b754489e7bbe112a0b792a8abde9 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.0E-29 T 14-10-2018 IPR027486 Ribosomal protein S10 domain XF_1151 1b58b754489e7bbe112a0b792a8abde9 103 Gene3D G3DSA:3.30.70.600 1 103 4.6E-32 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily XF_1151 1b58b754489e7bbe112a0b792a8abde9 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 5.9E-40 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1151 1b58b754489e7bbe112a0b792a8abde9 103 SMART SM01403 7 101 1.8E-48 T 14-10-2018 IPR027486 Ribosomal protein S10 domain XF_0064 57e76482d982d4b8619b86ea7036afc2 341 Hamap MF_01694 Biotin synthase [bioB]. 7 315 41.084 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XF_0064 57e76482d982d4b8619b86ea7036afc2 341 Pfam PF04055 Radical SAM superfamily 51 206 3.2E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XF_0064 57e76482d982d4b8619b86ea7036afc2 341 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 222 312 4.0E-20 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XF_0064 57e76482d982d4b8619b86ea7036afc2 341 SMART SM00729 45 251 3.5E-35 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XF_0064 57e76482d982d4b8619b86ea7036afc2 341 PIRSF PIRSF001619 2 321 1.6E-129 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XF_0064 57e76482d982d4b8619b86ea7036afc2 341 TIGRFAM TIGR00433 bioB: biotin synthase 17 312 5.8E-120 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XF_0064 57e76482d982d4b8619b86ea7036afc2 341 SMART SM00876 222 314 8.0E-48 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XF_0064 57e76482d982d4b8619b86ea7036afc2 341 Gene3D G3DSA:3.20.20.70 6 317 4.2E-124 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_0064 57e76482d982d4b8619b86ea7036afc2 341 SUPERFAMILY SSF102114 7 315 3.27E-90 T 14-10-2018 XF_0457 64d2dc7b886a406a39170048043c58ed 334 Gene3D G3DSA:3.30.360.10 151 316 1.6E-147 T 14-10-2018 XF_0457 64d2dc7b886a406a39170048043c58ed 334 SUPERFAMILY SSF55347 151 314 1.84E-73 T 14-10-2018 XF_0457 64d2dc7b886a406a39170048043c58ed 334 PIRSF PIRSF000149 1 334 5.7E-125 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0457 64d2dc7b886a406a39170048043c58ed 334 SMART SM00846 3 152 2.4E-93 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0457 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 5.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0457 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 5.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0457 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 5.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0457 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 5.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0457 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 5.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0457 64d2dc7b886a406a39170048043c58ed 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 2.3E-62 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0457 64d2dc7b886a406a39170048043c58ed 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0457 64d2dc7b886a406a39170048043c58ed 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 2.5E-36 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0457 64d2dc7b886a406a39170048043c58ed 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 1.5E-128 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0457 64d2dc7b886a406a39170048043c58ed 334 Gene3D G3DSA:3.40.50.720 4 327 1.6E-147 T 14-10-2018 XF_0457 64d2dc7b886a406a39170048043c58ed 334 SUPERFAMILY SSF51735 3 168 2.85E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1390 85daa8092ac0d2412a029070d4345998 319 Gene3D G3DSA:1.10.287.90 28 113 9.2E-33 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1390 85daa8092ac0d2412a029070d4345998 319 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 16 240 7.9E-112 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 XF_1390 85daa8092ac0d2412a029070d4345998 319 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 224 4.1E-8 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1390 85daa8092ac0d2412a029070d4345998 319 SUPERFAMILY SSF81464 30 117 3.92E-22 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1390 85daa8092ac0d2412a029070d4345998 319 Pfam PF06481 COX Aromatic Rich Motif 240 288 1.2E-15 T 14-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 XF_1390 85daa8092ac0d2412a029070d4345998 319 PIRSF PIRSF000292 2 315 3.4E-133 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 XF_1390 85daa8092ac0d2412a029070d4345998 319 SUPERFAMILY SSF49503 122 285 1.22E-48 T 14-10-2018 IPR008972 Cupredoxin XF_1390 85daa8092ac0d2412a029070d4345998 319 Gene3D G3DSA:2.60.40.420 114 285 5.3E-57 T 14-10-2018 IPR008972 Cupredoxin XF_2314 91241f31bc0902fbdb2842e3b5db8692 182 Gene3D G3DSA:1.10.530.40 19 169 1.4E-50 T 14-10-2018 XF_2314 91241f31bc0902fbdb2842e3b5db8692 182 SUPERFAMILY SSF53955 19 164 7.67E-48 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_2314 91241f31bc0902fbdb2842e3b5db8692 182 Pfam PF00959 Phage lysozyme 46 153 2.2E-20 T 14-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XF_2010 c60ce173b5f0ae7395b5e51b495d8934 185 SUPERFAMILY SSF101327 9 173 3.01E-39 T 14-10-2018 IPR036255 YgfB-like superfamily XF_2010 c60ce173b5f0ae7395b5e51b495d8934 185 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 184 31.02 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 XF_2010 c60ce173b5f0ae7395b5e51b495d8934 185 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 172 5.5E-30 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 XF_2010 c60ce173b5f0ae7395b5e51b495d8934 185 Gene3D G3DSA:1.20.120.740 1 178 2.6E-47 T 14-10-2018 XF_2010 c60ce173b5f0ae7395b5e51b495d8934 185 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 25 164 4.0E-10 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 XF_1732 d27ffcd957db277ceaf400db9a23b731 368 Gene3D G3DSA:3.20.20.70 11 367 5.0E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_1732 d27ffcd957db277ceaf400db9a23b731 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 13 343 6.8E-79 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 XF_1732 d27ffcd957db277ceaf400db9a23b731 368 SUPERFAMILY SSF51395 13 365 8.02E-112 T 14-10-2018 XF_0608 21532b6a551d207ca22bd47be85ee9f5 849 Pfam PF13439 Glycosyltransferase Family 4 20 193 6.0E-11 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XF_0608 21532b6a551d207ca22bd47be85ee9f5 849 SUPERFAMILY SSF53756 468 828 4.6E-41 T 14-10-2018 XF_0608 21532b6a551d207ca22bd47be85ee9f5 849 Gene3D G3DSA:3.40.50.2000 18 399 7.1E-53 T 14-10-2018 XF_0608 21532b6a551d207ca22bd47be85ee9f5 849 SUPERFAMILY SSF53756 18 403 6.8E-62 T 14-10-2018 XF_0608 21532b6a551d207ca22bd47be85ee9f5 849 Gene3D G3DSA:3.40.50.2000 200 384 7.1E-53 T 14-10-2018 XF_0608 21532b6a551d207ca22bd47be85ee9f5 849 Pfam PF00534 Glycosyl transferases group 1 223 383 1.9E-25 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 XF_0608 21532b6a551d207ca22bd47be85ee9f5 849 Pfam PF00534 Glycosyl transferases group 1 657 805 4.7E-23 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 XF_0608 21532b6a551d207ca22bd47be85ee9f5 849 Gene3D G3DSA:3.40.50.2000 642 814 2.1E-28 T 14-10-2018 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 SMART SM00228 299 381 3.5E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 SMART SM00228 418 503 7.1 T 14-10-2018 IPR001478 PDZ domain GO:0005515 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 SUPERFAMILY SSF50156 257 382 4.6E-23 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 Gene3D G3DSA:2.30.42.10 294 400 6.7E-25 T 14-10-2018 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 Gene3D G3DSA:2.30.42.10 422 513 1.2E-7 T 14-10-2018 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 55 509 1.0E-157 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 Pfam PF13180 PDZ domain 301 390 8.2E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 PRINTS PR00834 HtrA/DegQ protease family signature 156 176 1.6E-49 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 PRINTS PR00834 HtrA/DegQ protease family signature 196 220 1.6E-49 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 PRINTS PR00834 HtrA/DegQ protease family signature 231 248 1.6E-49 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 PRINTS PR00834 HtrA/DegQ protease family signature 253 270 1.6E-49 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 PRINTS PR00834 HtrA/DegQ protease family signature 135 147 1.6E-49 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 PRINTS PR00834 HtrA/DegQ protease family signature 339 351 1.6E-49 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 SUPERFAMILY SSF50156 444 510 9.99E-6 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 SUPERFAMILY SSF50494 53 291 2.38E-66 T 14-10-2018 IPR009003 Peptidase S1, PA clan XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 Gene3D G3DSA:2.40.10.120 54 292 8.1E-82 T 14-10-2018 XF_2241 597df7c215e53e4923fbb9af2cd43aa6 514 Pfam PF13365 Trypsin-like peptidase domain 126 260 1.8E-35 T 14-10-2018 XF_2619 778b77276c9134a0af1db8e3372bbe7e 519 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 31 485 5.6E-130 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 XF_2619 778b77276c9134a0af1db8e3372bbe7e 519 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 2 501 42.956 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 XF_2630 7ce614eae2ae07315e0a49615d491959 155 SUPERFAMILY SSF47973 3 148 3.92E-58 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily XF_2630 7ce614eae2ae07315e0a49615d491959 155 Pfam PF00177 Ribosomal protein S7p/S5e 1 148 4.7E-65 T 14-10-2018 IPR023798 Ribosomal protein S7 domain XF_2630 7ce614eae2ae07315e0a49615d491959 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 35.697 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 XF_2630 7ce614eae2ae07315e0a49615d491959 155 PIRSF PIRSF002122 2 155 2.1E-62 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 XF_2630 7ce614eae2ae07315e0a49615d491959 155 Gene3D G3DSA:1.10.455.10 2 154 6.9E-59 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily XF_2630 7ce614eae2ae07315e0a49615d491959 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 5.9E-66 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 XF_2630 7ce614eae2ae07315e0a49615d491959 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_2461 02830e1d695ccc9b5b04339cbf9c8f7a 197 SUPERFAMILY SSF52833 50 182 2.61E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_2461 02830e1d695ccc9b5b04339cbf9c8f7a 197 Pfam PF08534 Redoxin 46 169 9.9E-15 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 XF_2461 02830e1d695ccc9b5b04339cbf9c8f7a 197 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 36 180 3.4E-43 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 XF_2461 02830e1d695ccc9b5b04339cbf9c8f7a 197 Gene3D G3DSA:3.40.30.10 32 189 7.4E-36 T 14-10-2018 XF_2461 02830e1d695ccc9b5b04339cbf9c8f7a 197 ProSitePatterns PS00194 Thioredoxin family active site. 75 93 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XF_0741 0d52d4afd98259c8a55cf9cd5ef17b59 333 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 89 1.8E-20 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 XF_0741 0d52d4afd98259c8a55cf9cd5ef17b59 333 Pfam PF01409 tRNA synthetases class II core domain (F) 94 332 1.4E-104 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 XF_0741 0d52d4afd98259c8a55cf9cd5ef17b59 333 Gene3D G3DSA:3.30.930.10 9 333 9.6E-116 T 14-10-2018 XF_0741 0d52d4afd98259c8a55cf9cd5ef17b59 333 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 10 332 48.907 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 XF_0741 0d52d4afd98259c8a55cf9cd5ef17b59 333 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 41 332 2.0E-101 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 XF_0741 0d52d4afd98259c8a55cf9cd5ef17b59 333 SUPERFAMILY SSF46589 14 101 5.02E-19 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 XF_0741 0d52d4afd98259c8a55cf9cd5ef17b59 333 SUPERFAMILY SSF55681 94 332 6.43E-81 T 14-10-2018 XF_1664 14d01c727ce4c6e81dc31cdc8063a501 108 Pfam PF07120 Protein of unknown function (DUF1376) 8 91 1.5E-32 T 14-10-2018 IPR010781 Protein of unknown function DUF1376 XF_2288 01e1079646bce0d4b058688ca6481755 353 Gene3D G3DSA:1.10.443.10 177 348 2.6E-19 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XF_2288 01e1079646bce0d4b058688ca6481755 353 Gene3D G3DSA:1.10.150.130 72 175 2.4E-9 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal XF_2288 01e1079646bce0d4b058688ca6481755 353 Pfam PF00589 Phage integrase family 190 345 3.2E-6 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XF_2288 01e1079646bce0d4b058688ca6481755 353 SUPERFAMILY SSF56349 74 345 4.41E-37 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XF_1382 d208f4365d163faf38637e32fef95e2e 196 SUPERFAMILY SSF47240 38 196 1.97E-46 T 14-10-2018 IPR009078 Ferritin-like superfamily XF_1382 d208f4365d163faf38637e32fef95e2e 196 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 173 191 2.3E-12 T 14-10-2018 IPR002177 DNA-binding protein Dps XF_1382 d208f4365d163faf38637e32fef95e2e 196 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 2.3E-12 T 14-10-2018 IPR002177 DNA-binding protein Dps XF_1382 d208f4365d163faf38637e32fef95e2e 196 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 99 115 2.3E-12 T 14-10-2018 IPR002177 DNA-binding protein Dps XF_1382 d208f4365d163faf38637e32fef95e2e 196 ProSitePatterns PS00819 Dps protein family signature 2. 101 115 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 XF_1382 d208f4365d163faf38637e32fef95e2e 196 PIRSF PIRSF005900 32 196 1.9E-46 T 14-10-2018 IPR002177 DNA-binding protein Dps XF_1382 d208f4365d163faf38637e32fef95e2e 196 Gene3D G3DSA:1.20.1260.10 17 196 1.1E-56 T 14-10-2018 IPR012347 Ferritin-like XF_1382 d208f4365d163faf38637e32fef95e2e 196 ProSitePatterns PS00818 Dps protein family signature 1. 75 91 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 XF_1382 d208f4365d163faf38637e32fef95e2e 196 Pfam PF00210 Ferritin-like domain 56 196 2.8E-28 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 XF_1162 3247f3e10436b8b7a5b86ae239826e77 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1162 3247f3e10436b8b7a5b86ae239826e77 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.6E-57 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 XF_1162 3247f3e10436b8b7a5b86ae239826e77 122 SUPERFAMILY SSF50193 1 122 1.1E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 XF_1162 3247f3e10436b8b7a5b86ae239826e77 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.541 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 XF_1162 3247f3e10436b8b7a5b86ae239826e77 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 5.1E-55 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 XF_1162 3247f3e10436b8b7a5b86ae239826e77 122 Gene3D G3DSA:2.40.150.20 1 122 1.1E-54 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 XF_1162 3247f3e10436b8b7a5b86ae239826e77 122 SMART SM01374 1 122 1.4E-84 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 XF_1043 31df5752ab3d9ae61f475a1499e66790 263 SUPERFAMILY SSF51161 5 262 2.46E-71 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily XF_1043 31df5752ab3d9ae61f475a1499e66790 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 142 1.9E-7 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1043 31df5752ab3d9ae61f475a1499e66790 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 19 52 6.9E-7 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1043 31df5752ab3d9ae61f475a1499e66790 263 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 263 44.829 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 XF_1043 31df5752ab3d9ae61f475a1499e66790 263 PIRSF PIRSF000456 5 263 3.9E-97 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 XF_1043 31df5752ab3d9ae61f475a1499e66790 263 Gene3D G3DSA:1.20.1180.10 198 263 5.2E-22 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 XF_1043 31df5752ab3d9ae61f475a1499e66790 263 Gene3D G3DSA:2.160.10.10 2 190 6.2E-49 T 14-10-2018 XF_1043 31df5752ab3d9ae61f475a1499e66790 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 260 6.4E-25 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 XF_1043 31df5752ab3d9ae61f475a1499e66790 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 261 1.1E-107 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 XF_1537 c457b2b25df163f517abe15be89261e7 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 XF_1537 c457b2b25df163f517abe15be89261e7 142 SUPERFAMILY SSF52161 1 140 1.83E-56 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 XF_1537 c457b2b25df163f517abe15be89261e7 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 3 142 1.9E-59 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1537 c457b2b25df163f517abe15be89261e7 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.209 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 XF_1537 c457b2b25df163f517abe15be89261e7 142 Gene3D G3DSA:3.90.1180.10 1 142 1.8E-59 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 XF_1537 c457b2b25df163f517abe15be89261e7 142 Pfam PF00572 Ribosomal protein L13 15 138 1.2E-51 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 XF_1537 c457b2b25df163f517abe15be89261e7 142 PIRSF PIRSF002181 1 142 4.8E-48 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF13332 Haemagluttinin repeat 2300 2452 1.9E-6 T 14-10-2018 IPR025157 Hemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF13332 Haemagluttinin repeat 2526 2695 1.1E-40 T 14-10-2018 IPR025157 Hemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05594 Haemagluttinin repeat 948 1009 0.0036 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05594 Haemagluttinin repeat 672 735 1.0 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05594 Haemagluttinin repeat 1114 1202 0.31 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05594 Haemagluttinin repeat 317 363 0.013 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05594 Haemagluttinin repeat 1208 1280 0.052 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05594 Haemagluttinin repeat 773 831 6.4E-5 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05594 Haemagluttinin repeat 1054 1108 0.05 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05594 Haemagluttinin repeat 1287 1360 49.0 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05594 Haemagluttinin repeat 466 523 13.0 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05594 Haemagluttinin repeat 365 399 31.0 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05594 Haemagluttinin repeat 879 944 0.0016 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05594 Haemagluttinin repeat 2063 2135 0.0068 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05594 Haemagluttinin repeat 575 636 0.0021 T 14-10-2018 IPR008619 Filamentous haemagglutinin repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 7.3E-7 T 14-10-2018 IPR024973 ESPR domain XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 321 353 1.4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 979 1017 1.1E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 528 558 0.0077 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 464 499 0.07 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 856 888 0.33 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 507 539 0.0082 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 812 852 5.3E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1300 1338 0.07 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 378 414 0.0073 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1122 1162 4.2E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 959 989 0.0038 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 734 768 0.003 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 880 915 1.3E-4 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 568 599 5.1E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1222 1256 2.1 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1260 1298 0.0057 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1182 1214 2.6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 333 373 1.9E-5 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 918 956 3.6E-9 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 717 748 1.1 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 757 789 0.0012 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1063 1100 2.1E-7 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 775 811 0.0051 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 669 705 1.9E-6 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1453 1478 1.3 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 353 392 5.6E-7 T 14-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 3301 3403 2.2E-7 T 14-10-2018 IPR008487 Protein of unknown function DUF769 XF_2775 250844950bafac9a26827eed22d9661c 3455 Gene3D G3DSA:2.160.20.10 74 396 2.3E-99 T 14-10-2018 IPR012334 Pectin lyase fold XF_2775 250844950bafac9a26827eed22d9661c 3455 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 106 202 1.6E-25 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XF_2775 250844950bafac9a26827eed22d9661c 3455 Pfam PF05860 haemagglutination activity domain 74 205 3.7E-33 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XF_2775 250844950bafac9a26827eed22d9661c 3455 SUPERFAMILY SSF51126 76 361 1.91E-60 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor XF_2775 250844950bafac9a26827eed22d9661c 3455 SMART SM00912 87 207 1.0E-47 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal XF_0188 c73af4e5e5f2aeec64242e73e852deac 185 ProSitePatterns PS00893 Nudix box signature. 81 102 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XF_0188 c73af4e5e5f2aeec64242e73e852deac 185 SUPERFAMILY SSF55811 22 181 6.91E-35 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XF_0188 c73af4e5e5f2aeec64242e73e852deac 185 Gene3D G3DSA:3.90.79.10 17 185 4.4E-42 T 14-10-2018 XF_0188 c73af4e5e5f2aeec64242e73e852deac 185 Pfam PF00293 NUDIX domain 49 164 4.3E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XF_2348 e0c84fd5adf5e5a365e822d5bab77ddb 167 ProSitePatterns PS01317 SsrA-binding protein. 37 49 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site XF_2348 e0c84fd5adf5e5a365e822d5bab77ddb 167 TIGRFAM TIGR00086 smpB: SsrA-binding protein 19 160 5.4E-51 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 XF_2348 e0c84fd5adf5e5a365e822d5bab77ddb 167 Gene3D G3DSA:2.40.280.10 11 140 4.0E-44 T 14-10-2018 IPR023620 Small protein B XF_2348 e0c84fd5adf5e5a365e822d5bab77ddb 167 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 19 143 3.0E-68 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 XF_2348 e0c84fd5adf5e5a365e822d5bab77ddb 167 SUPERFAMILY SSF74982 13 143 1.09E-48 T 14-10-2018 IPR023620 Small protein B XF_2348 e0c84fd5adf5e5a365e822d5bab77ddb 167 Hamap MF_00023 SsrA-binding protein [smpB]. 1 166 69.072 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 XF_2348 e0c84fd5adf5e5a365e822d5bab77ddb 167 Pfam PF01668 SmpB protein 19 161 4.1E-56 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 Gene3D G3DSA:3.30.70.260 658 735 8.3E-14 T 14-10-2018 XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 SMART SM00471 73 185 4.1E-11 T 14-10-2018 IPR003607 HD/PDEase domain XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 Gene3D G3DSA:3.10.20.30 413 486 8.4E-28 T 14-10-2018 IPR012675 Beta-grasp domain superfamily XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 SUPERFAMILY SSF81271 407 479 8.83E-20 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 Pfam PF02824 TGS domain 420 479 7.1E-17 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 Pfam PF13328 HD domain 59 207 2.2E-49 T 14-10-2018 IPR003607 HD/PDEase domain XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 SMART SM00954 267 377 3.2E-56 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 Gene3D G3DSA:1.10.3210.10 37 222 6.1E-73 T 14-10-2018 XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 SUPERFAMILY SSF81301 213 424 1.37E-57 T 14-10-2018 XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 Pfam PF04607 Region found in RelA / SpoT proteins 267 376 2.1E-33 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 SUPERFAMILY SSF55021 663 734 1.22E-8 T 14-10-2018 XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 60 733 1.7E-224 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 Pfam PF13291 ACT domain 658 734 1.7E-18 T 14-10-2018 IPR002912 ACT domain XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 Gene3D G3DSA:3.30.460.10 226 357 1.7E-41 T 14-10-2018 XF_0352 4441022199574cb2a54cfd1ae4b0d8a5 735 SUPERFAMILY SSF109604 37 223 3.45E-69 T 14-10-2018 XF_2084 7c9a71e3c4bc0c9bc3e0608985eecd65 368 Gene3D G3DSA:1.10.287.470 93 165 9.9E-59 T 14-10-2018 XF_2084 7c9a71e3c4bc0c9bc3e0608985eecd65 368 Gene3D G3DSA:2.40.30.170 45 279 9.9E-59 T 14-10-2018 XF_2084 7c9a71e3c4bc0c9bc3e0608985eecd65 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 355 7.9E-61 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XF_2084 7c9a71e3c4bc0c9bc3e0608985eecd65 368 Gene3D G3DSA:2.40.420.20 38 351 9.9E-59 T 14-10-2018 XF_2084 7c9a71e3c4bc0c9bc3e0608985eecd65 368 Gene3D G3DSA:2.40.50.100 59 205 9.9E-59 T 14-10-2018 XF_2084 7c9a71e3c4bc0c9bc3e0608985eecd65 368 SUPERFAMILY SSF111369 49 260 2.22E-20 T 14-10-2018 XF_2084 7c9a71e3c4bc0c9bc3e0608985eecd65 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 260 4.1E-14 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XF_1042 b4c7561f2d08948457721daed09030d0 385 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 383 42.793 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XF_1042 b4c7561f2d08948457721daed09030d0 385 SUPERFAMILY SSF53756 6 382 1.96E-31 T 14-10-2018 XF_1042 b4c7561f2d08948457721daed09030d0 385 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 2 381 4.7E-112 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XF_1042 b4c7561f2d08948457721daed09030d0 385 Pfam PF02684 Lipid-A-disaccharide synthetase 7 378 5.9E-111 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XF_0654 b7f6619331c7c673f8d55e83e81f8e54 288 Gene3D G3DSA:3.90.1720.10 162 288 4.3E-39 T 14-10-2018 XF_0654 b7f6619331c7c673f8d55e83e81f8e54 288 SUPERFAMILY SSF54001 160 287 6.87E-40 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XF_0654 b7f6619331c7c673f8d55e83e81f8e54 288 Pfam PF00877 NlpC/P60 family 178 286 4.7E-29 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain XF_2763 c6adcaf15d8e15e517239bbaa96e4501 102 Gene3D G3DSA:1.10.260.40 23 98 3.4E-5 T 14-10-2018 XF_2763 c6adcaf15d8e15e517239bbaa96e4501 102 SUPERFAMILY SSF47413 34 96 2.3E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_2763 c6adcaf15d8e15e517239bbaa96e4501 102 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 11 98 3.2E-37 T 14-10-2018 IPR014057 Uncharacterized protein HI1420 XF_1436 3ff321361f910de1263fc1af559e4c70 193 Pfam PF13462 Thioredoxin 26 175 6.1E-8 T 14-10-2018 IPR012336 Thioredoxin-like fold XF_1436 3ff321361f910de1263fc1af559e4c70 193 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XF_1436 3ff321361f910de1263fc1af559e4c70 193 SUPERFAMILY SSF52833 6 176 2.76E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_1436 3ff321361f910de1263fc1af559e4c70 193 PIRSF PIRSF001488 7 190 4.5E-28 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL XF_1436 3ff321361f910de1263fc1af559e4c70 193 Gene3D G3DSA:3.40.30.10 1 193 3.9E-50 T 14-10-2018 XF_0472 f06b90626327185badc89f3fb686ab51 449 Gene3D G3DSA:3.30.1850.10 12 119 6.2E-29 T 14-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 XF_0472 f06b90626327185badc89f3fb686ab51 449 Pfam PF11892 Domain of unknown function (DUF3412) 329 447 4.3E-53 T 14-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 XF_0472 f06b90626327185badc89f3fb686ab51 449 Pfam PF03641 Possible lysine decarboxylase 186 325 4.2E-31 T 14-10-2018 IPR031100 LOG family XF_0472 f06b90626327185badc89f3fb686ab51 449 Gene3D G3DSA:3.40.50.450 121 447 1.3E-111 T 14-10-2018 XF_0472 f06b90626327185badc89f3fb686ab51 449 Pfam PF14793 Domain of unknown function (DUF4478) 17 107 5.6E-30 T 14-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 XF_0472 f06b90626327185badc89f3fb686ab51 449 SUPERFAMILY SSF102405 124 325 1.98E-38 T 14-10-2018 XF_1071 6714c892a86277e353b65ed37289061e 127 SUPERFAMILY SSF81343 12 123 8.83E-27 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1071 6714c892a86277e353b65ed37289061e 127 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 117 1.2E-16 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1071 6714c892a86277e353b65ed37289061e 127 Gene3D G3DSA:1.20.1300.10 12 123 2.5E-25 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1071 6714c892a86277e353b65ed37289061e 127 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 18 120 3.4E-28 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 XF_1412 e3d64d33550abfb0225b68578f00f075 182 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 20 171 5.1E-34 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XF_1412 e3d64d33550abfb0225b68578f00f075 182 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 152 1.2E-5 T 14-10-2018 XF_1412 e3d64d33550abfb0225b68578f00f075 182 Gene3D G3DSA:3.40.50.1000 1 182 2.0E-47 T 14-10-2018 IPR023214 HAD superfamily XF_1412 e3d64d33550abfb0225b68578f00f075 182 PIRSF PIRSF006118 7 181 3.0E-65 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XF_1412 e3d64d33550abfb0225b68578f00f075 182 SUPERFAMILY SSF56784 17 176 2.85E-33 T 14-10-2018 IPR036412 HAD-like superfamily XF_0201 2d70452182e6024548cb0cffaece69d5 199 Pfam PF13489 Methyltransferase domain 30 164 3.1E-8 T 14-10-2018 XF_0201 2d70452182e6024548cb0cffaece69d5 199 SUPERFAMILY SSF53335 12 182 3.19E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0201 2d70452182e6024548cb0cffaece69d5 199 Gene3D G3DSA:3.40.50.150 1 182 5.1E-17 T 14-10-2018 XF_1142 96d674447bf405bd70db87f25eced504 143 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 8 86 3.2E-28 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1142 96d674447bf405bd70db87f25eced504 143 SUPERFAMILY SSF51344 6 88 3.79E-23 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1142 96d674447bf405bd70db87f25eced504 143 SUPERFAMILY SSF46604 91 138 5.75E-10 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1142 96d674447bf405bd70db87f25eced504 143 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 5 133 19.72 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1142 96d674447bf405bd70db87f25eced504 143 Gene3D G3DSA:2.60.15.10 2 141 6.9E-37 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1142 96d674447bf405bd70db87f25eced504 143 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 12 92 1.0E-39 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1142 96d674447bf405bd70db87f25eced504 143 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 6 135 1.2E-42 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1142 96d674447bf405bd70db87f25eced504 143 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 3.4E-8 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain XF_0791 ff90803cb2d041db1e2b10ef0fde7abd 87 Pfam PF04999 Cell division protein FtsL 5 87 1.3E-25 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 XF_0791 ff90803cb2d041db1e2b10ef0fde7abd 87 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 4 85 1.0E-23 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 XF_0791 ff90803cb2d041db1e2b10ef0fde7abd 87 Hamap MF_00910 Cell division protein FtsL [ftsL]. 2 85 16.566 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 XF_0563 788a04e88479e090368e2e1377b77fa6 140 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 137 18.045 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 XF_0563 788a04e88479e090368e2e1377b77fa6 140 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 79 3.0E-30 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 XF_0563 788a04e88479e090368e2e1377b77fa6 140 Pfam PF02416 mttA/Hcf106 family 4 37 8.7E-7 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 XF_0563 788a04e88479e090368e2e1377b77fa6 140 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 9.2E-21 T 14-10-2018 XF_0563 788a04e88479e090368e2e1377b77fa6 140 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 9.2E-21 T 14-10-2018 XF_0563 788a04e88479e090368e2e1377b77fa6 140 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 9.2E-21 T 14-10-2018 XF_2476 e43801e4a88f55af21378405e671ecfe 275 Gene3D G3DSA:3.30.540.10 1 139 6.3E-46 T 14-10-2018 XF_2476 e43801e4a88f55af21378405e671ecfe 275 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 XF_2476 e43801e4a88f55af21378405e671ecfe 275 Gene3D G3DSA:3.40.190.80 140 267 4.1E-34 T 14-10-2018 XF_2476 e43801e4a88f55af21378405e671ecfe 275 SUPERFAMILY SSF56655 4 262 4.84E-78 T 14-10-2018 XF_2476 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 3.5E-55 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XF_2476 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 3.5E-55 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XF_2476 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 3.5E-55 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XF_2476 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 3.5E-55 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XF_2476 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 3.5E-55 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XF_2476 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 3.5E-55 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XF_2476 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 2.6E-17 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XF_2476 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 2.6E-17 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XF_2476 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 2.6E-17 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XF_2476 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 2.6E-17 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XF_2476 e43801e4a88f55af21378405e671ecfe 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site XF_2476 e43801e4a88f55af21378405e671ecfe 275 Pfam PF00459 Inositol monophosphatase family 4 251 4.5E-62 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XF_2669 d13a71dbce3341449469ac1472923bc4 104 PIRSF PIRSF005894 1 104 8.9E-45 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 XF_2669 d13a71dbce3341449469ac1472923bc4 104 Pfam PF00462 Glutaredoxin 17 81 2.1E-15 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 XF_2669 d13a71dbce3341449469ac1472923bc4 104 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 1.0E-39 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related XF_2669 d13a71dbce3341449469ac1472923bc4 104 Gene3D G3DSA:3.40.30.10 6 102 2.5E-27 T 14-10-2018 XF_2669 d13a71dbce3341449469ac1472923bc4 104 SUPERFAMILY SSF52833 3 102 5.3E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_2686 cdd2825ac29a6567ca80b13daab77df6 469 Pfam PF01554 MatE 39 197 9.2E-21 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XF_2686 cdd2825ac29a6567ca80b13daab77df6 469 Pfam PF01554 MatE 265 424 2.8E-28 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XF_2686 cdd2825ac29a6567ca80b13daab77df6 469 TIGRFAM TIGR00797 matE: MATE efflux family protein 39 439 2.2E-77 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XF_1474 08f78eb65b77e9255cd4ba71496e305b 422 Pfam PF01458 Uncharacterized protein family (UPF0051) 170 392 1.6E-61 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 XF_1474 08f78eb65b77e9255cd4ba71496e305b 422 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 133 402 1.3E-78 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 XF_1474 08f78eb65b77e9255cd4ba71496e305b 422 SUPERFAMILY SSF101960 19 414 1.23E-91 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily XF_0487 b8abd3be54e56f7f292a5681d9b91b68 185 Pfam PF00114 Pilin (bacterial filament) 42 175 7.7E-25 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XF_0487 b8abd3be54e56f7f292a5681d9b91b68 185 SUPERFAMILY SSF54523 35 181 1.1E-20 T 14-10-2018 XF_0487 b8abd3be54e56f7f292a5681d9b91b68 185 Gene3D G3DSA:3.30.700.10 14 176 5.8E-19 T 14-10-2018 XF_0925 70489c3268f04bdd7b4f08c34173c819 392 SMART SM00257 40 88 2.6E-8 T 14-10-2018 IPR018392 LysM domain XF_0925 70489c3268f04bdd7b4f08c34173c819 392 Pfam PF01476 LysM domain 41 86 3.8E-13 T 14-10-2018 IPR018392 LysM domain XF_0925 70489c3268f04bdd7b4f08c34173c819 392 SUPERFAMILY SSF54106 39 87 2.35E-7 T 14-10-2018 XF_0925 70489c3268f04bdd7b4f08c34173c819 392 Gene3D G3DSA:3.10.350.10 39 86 2.3E-15 T 14-10-2018 IPR036779 LysM domain superfamily XF_2158 d8c2f21666ac66764e8e1e2afdd88324 153 Hamap MF_00042 Ribonuclease H [rnhA]. 4 152 35.556 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 XF_2158 d8c2f21666ac66764e8e1e2afdd88324 153 SUPERFAMILY SSF53098 5 141 1.77E-52 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily XF_2158 d8c2f21666ac66764e8e1e2afdd88324 153 Gene3D G3DSA:3.30.420.10 2 152 7.6E-56 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XF_2158 d8c2f21666ac66764e8e1e2afdd88324 153 Pfam PF00075 RNase H 5 142 3.2E-45 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 XF_1562 d839dac22de56b57e4a8a401630f01bd 88 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 81 1.0E-21 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system XF_1562 d839dac22de56b57e4a8a401630f01bd 88 Gene3D G3DSA:3.10.450.530 1 83 5.5E-15 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily XF_0987 b2217260ca2949ce44e64982337fbeb3 285 Gene3D G3DSA:2.70.70.10 127 284 8.1E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif XF_0987 b2217260ca2949ce44e64982337fbeb3 285 SUPERFAMILY SSF51261 43 281 3.4E-51 T 14-10-2018 IPR011055 Duplicated hybrid motif XF_0987 b2217260ca2949ce44e64982337fbeb3 285 Pfam PF01551 Peptidase family M23 182 277 5.6E-29 T 14-10-2018 IPR016047 Peptidase M23 XF_a0060 88b0e5ac1356f8c4d98c9faeaef8e5fd 254 PIRSF PIRSF009320 1 61 2.0E-16 T 14-10-2018 XF_a0060 88b0e5ac1356f8c4d98c9faeaef8e5fd 254 PIRSF PIRSF009320 84 253 8.3E-8 T 14-10-2018 XF_a0060 88b0e5ac1356f8c4d98c9faeaef8e5fd 254 Pfam PF13614 AAA domain 1 173 7.7E-33 T 14-10-2018 IPR025669 AAA domain XF_a0060 88b0e5ac1356f8c4d98c9faeaef8e5fd 254 Gene3D G3DSA:3.40.50.300 1 254 2.9E-52 T 14-10-2018 XF_a0060 88b0e5ac1356f8c4d98c9faeaef8e5fd 254 SUPERFAMILY SSF52540 1 252 1.87E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0595 91bbbcbb676b5b3fe92a49c831465fce 267 Pfam PF10670 Domain of unknown function (DUF4198) 18 242 1.6E-64 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 XF_2419 94055b6d337ef3ad63048d845d3da2f5 315 SUPERFAMILY SSF82114 175 310 5.45E-42 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 XF_2419 94055b6d337ef3ad63048d845d3da2f5 315 Gene3D G3DSA:2.40.30.30 187 314 2.2E-38 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 XF_2419 94055b6d337ef3ad63048d845d3da2f5 315 SMART SM00904 184 307 1.7E-55 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 XF_2419 94055b6d337ef3ad63048d845d3da2f5 315 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 306 1.3E-77 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 XF_2419 94055b6d337ef3ad63048d845d3da2f5 315 Gene3D G3DSA:3.40.50.620 11 186 9.4E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_2419 94055b6d337ef3ad63048d845d3da2f5 315 Pfam PF06574 FAD synthetase 15 167 6.0E-47 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 XF_2419 94055b6d337ef3ad63048d845d3da2f5 315 SUPERFAMILY SSF52374 19 176 4.22E-28 T 14-10-2018 XF_2419 94055b6d337ef3ad63048d845d3da2f5 315 PIRSF PIRSF004491 9 313 1.1E-89 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 XF_2419 94055b6d337ef3ad63048d845d3da2f5 315 Pfam PF01687 Riboflavin kinase 185 306 2.6E-34 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 XF_2239 f47ff01d453fc69e7f26c381019f005a 206 SUPERFAMILY SSF88946 11 110 9.73E-27 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XF_2239 f47ff01d453fc69e7f26c381019f005a 206 Gene3D G3DSA:1.10.10.10 126 194 9.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_2239 f47ff01d453fc69e7f26c381019f005a 206 Gene3D G3DSA:1.10.1740.10 3 125 5.5E-35 T 14-10-2018 XF_2239 f47ff01d453fc69e7f26c381019f005a 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 186 8.1E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XF_2239 f47ff01d453fc69e7f26c381019f005a 206 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 6 194 2.0E-91 T 14-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XF_2239 f47ff01d453fc69e7f26c381019f005a 206 SUPERFAMILY SSF88659 127 186 8.29E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XF_2239 f47ff01d453fc69e7f26c381019f005a 206 Pfam PF08281 Sigma-70, region 4 134 185 1.5E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XF_2239 f47ff01d453fc69e7f26c381019f005a 206 Pfam PF04542 Sigma-70 region 2 29 96 2.3E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XF_1512 d3d14ad0ecea70628cc62592b3cde94a 275 Pfam PF05175 Methyltransferase small domain 99 186 1.6E-18 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 XF_1512 d3d14ad0ecea70628cc62592b3cde94a 275 SUPERFAMILY SSF53335 14 270 2.74E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_1512 d3d14ad0ecea70628cc62592b3cde94a 275 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 272 43.01 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 XF_1512 d3d14ad0ecea70628cc62592b3cde94a 275 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 19 268 1.9E-88 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 XF_1512 d3d14ad0ecea70628cc62592b3cde94a 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 177 183 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XF_1512 d3d14ad0ecea70628cc62592b3cde94a 275 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 10 271 7.1E-73 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 XF_1512 d3d14ad0ecea70628cc62592b3cde94a 275 Gene3D G3DSA:1.10.8.10 5 80 5.6E-19 T 14-10-2018 XF_1512 d3d14ad0ecea70628cc62592b3cde94a 275 Gene3D G3DSA:3.40.50.150 83 272 6.8E-60 T 14-10-2018 XF_1161 7f8b622aaa642718d912cb483a2e48ef 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 12 82 1.7E-32 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1161 7f8b622aaa642718d912cb483a2e48ef 89 PRINTS PR00973 Ribosomal protein S17 family signature 62 72 1.6E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1161 7f8b622aaa642718d912cb483a2e48ef 89 PRINTS PR00973 Ribosomal protein S17 family signature 30 53 1.6E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1161 7f8b622aaa642718d912cb483a2e48ef 89 PRINTS PR00973 Ribosomal protein S17 family signature 72 79 1.6E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1161 7f8b622aaa642718d912cb483a2e48ef 89 Gene3D G3DSA:2.40.50.140 8 88 5.1E-33 T 14-10-2018 XF_1161 7f8b622aaa642718d912cb483a2e48ef 89 SUPERFAMILY SSF50249 11 87 3.9E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1161 7f8b622aaa642718d912cb483a2e48ef 89 Pfam PF00366 Ribosomal protein S17 16 83 2.1E-30 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1161 7f8b622aaa642718d912cb483a2e48ef 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 12 82 1.0E-35 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1161 7f8b622aaa642718d912cb483a2e48ef 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 8 86 22.488 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2361 e979b145a51f55083e86a3be9cd09caf 281 Gene3D G3DSA:3.40.50.11010 1 119 1.4E-37 T 14-10-2018 XF_2361 e979b145a51f55083e86a3be9cd09caf 281 Gene3D G3DSA:3.40.50.2000 122 258 2.7E-5 T 14-10-2018 XF_2361 e979b145a51f55083e86a3be9cd09caf 281 ProDom PD011569 METAL-BINDING IRON IRON-SULFUR 4FE-4S FERREDOXIN OXIDOREDUCTASE DOMAIN ELECTRON METHANOGENESIS A 46 194 2.0E-4 T 14-10-2018 IPR002708 Homocysteine biosynthesis enzyme, sulfur-incorporation XF_2361 e979b145a51f55083e86a3be9cd09caf 281 SUPERFAMILY SSF53756 13 268 3.06E-9 T 14-10-2018 XF_0707 8d0eac71b5852d5c9c29bd745cf8254a 164 Gene3D G3DSA:1.10.530.40 3 157 1.0E-48 T 14-10-2018 XF_0707 8d0eac71b5852d5c9c29bd745cf8254a 164 Pfam PF00959 Phage lysozyme 30 137 6.9E-19 T 14-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XF_0707 8d0eac71b5852d5c9c29bd745cf8254a 164 SUPERFAMILY SSF53955 5 148 2.4E-47 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_2504 8d0eac71b5852d5c9c29bd745cf8254a 164 Gene3D G3DSA:1.10.530.40 3 157 1.0E-48 T 14-10-2018 XF_2504 8d0eac71b5852d5c9c29bd745cf8254a 164 Pfam PF00959 Phage lysozyme 30 137 6.9E-19 T 14-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XF_2504 8d0eac71b5852d5c9c29bd745cf8254a 164 SUPERFAMILY SSF53955 5 148 2.4E-47 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_0298 7e9a0d9908d06f9bbf681d1135a0e781 93 SUPERFAMILY SSF47413 13 63 1.05E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_0298 7e9a0d9908d06f9bbf681d1135a0e781 93 SMART SM00530 19 77 5.4E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_0298 7e9a0d9908d06f9bbf681d1135a0e781 93 Pfam PF13560 Helix-turn-helix domain 15 76 8.4E-10 T 14-10-2018 XF_0298 7e9a0d9908d06f9bbf681d1135a0e781 93 Gene3D G3DSA:1.10.260.40 18 91 2.4E-14 T 14-10-2018 XF_a0061 e607bb55206086f6ad00deb86d1e2be6 136 Pfam PF00436 Single-strand binding protein family 4 108 5.2E-40 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XF_a0061 e607bb55206086f6ad00deb86d1e2be6 136 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 119 1.4E-45 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XF_a0061 e607bb55206086f6ad00deb86d1e2be6 136 SUPERFAMILY SSF50249 3 136 4.86E-48 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_a0061 e607bb55206086f6ad00deb86d1e2be6 136 Gene3D G3DSA:2.40.50.140 2 132 2.1E-44 T 14-10-2018 XF_a0061 e607bb55206086f6ad00deb86d1e2be6 136 PIRSF PIRSF002070 1 135 2.2E-35 T 14-10-2018 XF_a0061 e607bb55206086f6ad00deb86d1e2be6 136 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 35.384 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XF_0903 3d58f82eb16b90a8859cff49dd55038a 161 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 152 7.3E-36 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 XF_0903 3d58f82eb16b90a8859cff49dd55038a 161 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 7 155 23.316 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 XF_0903 3d58f82eb16b90a8859cff49dd55038a 161 SUPERFAMILY SSF55486 23 157 3.66E-43 T 14-10-2018 XF_0903 3d58f82eb16b90a8859cff49dd55038a 161 Gene3D G3DSA:3.40.390.30 6 161 3.2E-48 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 XF_0903 3d58f82eb16b90a8859cff49dd55038a 161 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site XF_0903 3d58f82eb16b90a8859cff49dd55038a 161 Pfam PF02130 Uncharacterized protein family UPF0054 27 151 1.7E-34 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 XF_2037 0c2f75b73cdc7b8f5b3a5231c14ff36d 418 Pfam PF13480 Acetyltransferase (GNAT) domain 205 335 5.8E-8 T 14-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 XF_2037 0c2f75b73cdc7b8f5b3a5231c14ff36d 418 SUPERFAMILY SSF55729 194 366 1.41E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase XF_0875 9679456a6616c3ae58c0dd9ca0678442 334 Pfam PF00005 ABC transporter 21 168 8.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_0875 9679456a6616c3ae58c0dd9ca0678442 334 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_0875 9679456a6616c3ae58c0dd9ca0678442 334 Gene3D G3DSA:3.30.70.260 242 333 1.8E-14 T 14-10-2018 XF_0875 9679456a6616c3ae58c0dd9ca0678442 334 SUPERFAMILY SSF52540 1 239 4.54E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0875 9679456a6616c3ae58c0dd9ca0678442 334 Gene3D G3DSA:3.40.50.300 1 241 8.0E-73 T 14-10-2018 XF_0875 9679456a6616c3ae58c0dd9ca0678442 334 SMART SM00382 30 216 1.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_0875 9679456a6616c3ae58c0dd9ca0678442 334 Pfam PF09383 NIL domain 261 330 8.4E-17 T 14-10-2018 IPR018449 NIL domain XF_0875 9679456a6616c3ae58c0dd9ca0678442 334 SMART SM00930 259 332 1.1E-23 T 14-10-2018 IPR018449 NIL domain XF_0875 9679456a6616c3ae58c0dd9ca0678442 334 SUPERFAMILY SSF55021 259 332 1.14E-14 T 14-10-2018 XF_2511 d7646acf0ded351a0cc24a64b13a9346 256 Gene3D G3DSA:2.10.109.10 119 252 4.4E-10 T 14-10-2018 XF_2511 d7646acf0ded351a0cc24a64b13a9346 256 SMART SM00530 6 62 1.1E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_2511 d7646acf0ded351a0cc24a64b13a9346 256 Pfam PF00717 Peptidase S24-like 159 217 1.2E-9 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XF_2511 d7646acf0ded351a0cc24a64b13a9346 256 SUPERFAMILY SSF47413 2 65 4.22E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_2511 d7646acf0ded351a0cc24a64b13a9346 256 Pfam PF01381 Helix-turn-helix 8 62 1.8E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_2511 d7646acf0ded351a0cc24a64b13a9346 256 SUPERFAMILY SSF51306 116 251 7.06E-20 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XF_2511 d7646acf0ded351a0cc24a64b13a9346 256 Gene3D G3DSA:1.10.260.40 2 70 2.1E-14 T 14-10-2018 XF_1708 5966d61a62244ca40a752d700addbe69 371 SUPERFAMILY SSF47413 9 79 2.93E-20 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_1708 5966d61a62244ca40a752d700addbe69 371 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 9 80 6.3E-16 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 XF_1708 5966d61a62244ca40a752d700addbe69 371 SMART SM00530 13 68 4.7E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_1708 5966d61a62244ca40a752d700addbe69 371 Gene3D G3DSA:1.10.260.40 5 81 2.3E-25 T 14-10-2018 XF_1708 5966d61a62244ca40a752d700addbe69 371 Pfam PF01381 Helix-turn-helix 14 66 7.3E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_1494 e66f5805367da0c10d7f49e06cda15ec 295 Gene3D G3DSA:1.25.40.10 180 290 2.1E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_1494 e66f5805367da0c10d7f49e06cda15ec 295 SUPERFAMILY SSF48452 206 281 2.74E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_1494 e66f5805367da0c10d7f49e06cda15ec 295 SMART SM00028 241 274 8.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_1494 e66f5805367da0c10d7f49e06cda15ec 295 SMART SM00028 207 240 22.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_1494 e66f5805367da0c10d7f49e06cda15ec 295 Pfam PF13371 Tetratricopeptide repeat 213 284 5.6E-22 T 14-10-2018 XF_1494 e66f5805367da0c10d7f49e06cda15ec 295 Pfam PF13369 Transglutaminase-like superfamily 64 211 2.6E-46 T 14-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 XF_2386 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:3.30.70.1320 134 326 1.1E-267 T 14-10-2018 XF_2386 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:1.20.1640.10 505 1011 1.1E-267 T 14-10-2018 XF_2386 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:3.30.70.1430 40 804 1.1E-267 T 14-10-2018 XF_2386 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:3.30.70.1430 559 656 1.1E-267 T 14-10-2018 XF_2386 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:1.20.1640.10 10 504 1.1E-267 T 14-10-2018 XF_2386 5989a222902f7cb63a6967da40a26951 1034 SUPERFAMILY SSF82693 135 324 2.62E-21 T 14-10-2018 XF_2386 5989a222902f7cb63a6967da40a26951 1034 SUPERFAMILY SSF82714 182 265 1.57E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2386 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:3.30.2090.10 708 796 1.1E-267 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2386 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.8E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2386 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.8E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2386 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.8E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2386 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2386 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.8E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2386 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2386 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 3.8E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2386 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.8E-56 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2386 5989a222902f7cb63a6967da40a26951 1034 SUPERFAMILY SSF82866 795 1014 1.44E-40 T 14-10-2018 XF_2386 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:3.30.70.1440 657 853 1.1E-267 T 14-10-2018 XF_2386 5989a222902f7cb63a6967da40a26951 1034 SUPERFAMILY SSF82714 712 791 2.22E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_2386 5989a222902f7cb63a6967da40a26951 1034 SUPERFAMILY SSF82693 40 134 4.19E-22 T 14-10-2018 XF_2386 5989a222902f7cb63a6967da40a26951 1034 SUPERFAMILY SSF82866 290 489 3.01E-44 T 14-10-2018 XF_2386 5989a222902f7cb63a6967da40a26951 1034 Pfam PF00873 AcrB/AcrD/AcrF family 6 1014 1.7E-279 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XF_2386 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:3.30.2090.10 178 269 1.1E-267 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XF_1656 b321e269892e69a45337386028049c81 62 Gene3D G3DSA:1.10.8.1050 1 60 1.1E-22 T 14-10-2018 XF_0383 aa48605386dc732c0a2aac813b08e3d7 159 Pfam PF03203 MerC mercury resistance protein 34 145 5.0E-21 T 14-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 XF_1224 9b58165eba68309bd568682b6311ab36 1217 Pfam PF05567 Neisseria PilC beta-propeller domain 744 1046 2.1E-57 T 14-10-2018 IPR008707 PilC beta-propeller domain XF_1224 9b58165eba68309bd568682b6311ab36 1217 SUPERFAMILY SSF50998 742 1194 1.31E-8 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XF_1391 53c81677378175ece1ad20627e40fdc0 332 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site XF_1391 53c81677378175ece1ad20627e40fdc0 332 Pfam PF00348 Polyprenyl synthetase 42 273 4.0E-74 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 XF_1391 53c81677378175ece1ad20627e40fdc0 332 Gene3D G3DSA:1.10.600.10 3 331 2.2E-103 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily XF_1391 53c81677378175ece1ad20627e40fdc0 332 SUPERFAMILY SSF48576 14 332 4.14E-92 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily XF_2358 4344d39e391cd6604089ac993fc647ec 443 Gene3D G3DSA:3.40.50.150 87 437 1.6E-97 T 14-10-2018 XF_2358 4344d39e391cd6604089ac993fc647ec 443 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 271 438 3.5E-20 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 XF_2358 4344d39e391cd6604089ac993fc647ec 443 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 425 435 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site XF_2358 4344d39e391cd6604089ac993fc647ec 443 Gene3D G3DSA:3.40.1350.30 133 274 1.6E-97 T 14-10-2018 XF_2358 4344d39e391cd6604089ac993fc647ec 443 Gene3D G3DSA:2.40.50.140 1 85 2.0E-23 T 14-10-2018 XF_2358 4344d39e391cd6604089ac993fc647ec 443 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 373 403 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site XF_2358 4344d39e391cd6604089ac993fc647ec 443 SUPERFAMILY SSF50249 12 72 5.6E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2358 4344d39e391cd6604089ac993fc647ec 443 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 19 435 6.9E-92 T 14-10-2018 XF_2358 4344d39e391cd6604089ac993fc647ec 443 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 13 443 63.067 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 XF_2358 4344d39e391cd6604089ac993fc647ec 443 SUPERFAMILY SSF53335 74 441 2.08E-75 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_2582 f47b222bc52b046a706422913b5f1877 564 SMART SM00382 351 537 4.5E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_2582 f47b222bc52b046a706422913b5f1877 564 Gene3D G3DSA:3.40.50.300 316 563 7.2E-92 T 14-10-2018 XF_2582 f47b222bc52b046a706422913b5f1877 564 Gene3D G3DSA:1.20.1560.10 1 309 3.0E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XF_2582 f47b222bc52b046a706422913b5f1877 564 Pfam PF00664 ABC transporter transmembrane region 12 270 4.6E-51 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XF_2582 f47b222bc52b046a706422913b5f1877 564 SUPERFAMILY SSF90123 2 304 2.49E-66 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XF_2582 f47b222bc52b046a706422913b5f1877 564 ProSitePatterns PS00211 ABC transporters family signature. 463 477 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_2582 f47b222bc52b046a706422913b5f1877 564 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 1 562 1.7E-271 T 14-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein XF_2582 f47b222bc52b046a706422913b5f1877 564 SUPERFAMILY SSF52540 315 562 4.22E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2582 f47b222bc52b046a706422913b5f1877 564 Pfam PF00005 ABC transporter 342 491 1.6E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_2267 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 SUPERFAMILY SSF81338 5 253 6.54E-62 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 XF_2267 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 Pfam PF00230 Major intrinsic protein 4 247 7.3E-49 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XF_2267 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 PRINTS PR00783 Major intrinsic protein family signature 149 167 1.5E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XF_2267 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 PRINTS PR00783 Major intrinsic protein family signature 7 26 1.5E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XF_2267 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 PRINTS PR00783 Major intrinsic protein family signature 183 205 1.5E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XF_2267 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 PRINTS PR00783 Major intrinsic protein family signature 49 73 1.5E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XF_2267 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 PRINTS PR00783 Major intrinsic protein family signature 86 105 1.5E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XF_2267 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 PRINTS PR00783 Major intrinsic protein family signature 231 251 1.5E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XF_2267 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 TIGRFAM TIGR00861 MIP: MIP family channel proteins 13 247 9.4E-58 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XF_2267 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 ProSitePatterns PS00221 MIP family signature. 67 75 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 XF_2267 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 Gene3D G3DSA:1.20.1080.10 1 256 2.5E-76 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 XF_2040 79c744c8645dadde0511bd0400bd0305 366 Pfam PF11899 Protein of unknown function (DUF3419) 5 321 1.3E-24 T 14-10-2018 IPR021829 Protein of unknown function DUF3419 XF_2198 6c77d684bfcf911d611ed9bef2f56442 133 SUPERFAMILY SSF160472 1 121 3.66E-41 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_2198 6c77d684bfcf911d611ed9bef2f56442 133 Pfam PF04591 Protein of unknown function, DUF596 56 132 1.0E-29 T 14-10-2018 IPR007670 Protein of unknown function DUF596 XF_2198 6c77d684bfcf911d611ed9bef2f56442 133 Gene3D G3DSA:1.10.3510.10 2 123 2.2E-23 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_2041 8aae42a05df141f3cd7e2df2170decec 253 Gene3D G3DSA:1.20.910.10 16 251 1.2E-61 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 XF_2041 8aae42a05df141f3cd7e2df2170decec 253 Pfam PF14518 Iron-containing redox enzyme 58 222 6.2E-23 T 14-10-2018 XF_2041 8aae42a05df141f3cd7e2df2170decec 253 SUPERFAMILY SSF48613 22 231 1.36E-30 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 XF_2609 8fd63ccb78baaba75c53b621765a2186 299 SUPERFAMILY SSF52821 144 276 4.39E-22 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily XF_2609 8fd63ccb78baaba75c53b621765a2186 299 Gene3D G3DSA:3.30.70.100 35 137 1.2E-28 T 14-10-2018 XF_2609 8fd63ccb78baaba75c53b621765a2186 299 SMART SM00450 160 261 6.6E-9 T 14-10-2018 IPR001763 Rhodanese-like domain XF_2609 8fd63ccb78baaba75c53b621765a2186 299 Hamap MF_00469 UPF0176 protein YceA [yceA]. 43 298 31.839 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 XF_2609 8fd63ccb78baaba75c53b621765a2186 299 Gene3D G3DSA:3.40.250.10 143 293 3.8E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily XF_2591 14bf638312140e49f924c63bad3e9869 698 SUPERFAMILY SSF140356 21 123 2.35E-34 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 XF_2591 14bf638312140e49f924c63bad3e9869 698 Gene3D G3DSA:3.30.870.10 521 698 4.2E-63 T 14-10-2018 XF_2591 14bf638312140e49f924c63bad3e9869 698 Hamap MF_00347 Polyphosphate kinase [ppk]. 22 691 27.513 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 XF_2591 14bf638312140e49f924c63bad3e9869 698 Pfam PF02503 Polyphosphate kinase middle domain 139 340 1.3E-57 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 XF_2591 14bf638312140e49f924c63bad3e9869 698 Pfam PF13089 Polyphosphate kinase N-terminal domain 25 128 2.1E-30 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 XF_2591 14bf638312140e49f924c63bad3e9869 698 Gene3D G3DSA:3.30.1840.10 20 332 1.4E-91 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 XF_2591 14bf638312140e49f924c63bad3e9869 698 Gene3D G3DSA:3.30.870.10 334 517 7.4E-73 T 14-10-2018 XF_2591 14bf638312140e49f924c63bad3e9869 698 SUPERFAMILY SSF56024 518 696 9.87E-67 T 14-10-2018 XF_2591 14bf638312140e49f924c63bad3e9869 698 PIRSF PIRSF015589 6 698 8.3E-261 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 XF_2591 14bf638312140e49f924c63bad3e9869 698 Pfam PF13090 Polyphosphate kinase C-terminal domain 347 694 4.8E-149 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 XF_2591 14bf638312140e49f924c63bad3e9869 698 SUPERFAMILY SSF56024 333 512 5.34E-58 T 14-10-2018 XF_2591 14bf638312140e49f924c63bad3e9869 698 SUPERFAMILY SSF143724 129 333 6.67E-58 T 14-10-2018 XF_2591 14bf638312140e49f924c63bad3e9869 698 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 25 696 4.5E-275 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 XF_0460 213e2a093dd852c1332fdcb4733932b8 246 SMART SM00028 33 66 350.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_0460 213e2a093dd852c1332fdcb4733932b8 246 SMART SM00028 67 100 2.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_0460 213e2a093dd852c1332fdcb4733932b8 246 SMART SM00028 137 170 3.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_0460 213e2a093dd852c1332fdcb4733932b8 246 Gene3D G3DSA:1.25.40.10 32 243 6.7E-39 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_0460 213e2a093dd852c1332fdcb4733932b8 246 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 25 237 1.4E-47 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW XF_0460 213e2a093dd852c1332fdcb4733932b8 246 Pfam PF13181 Tetratricopeptide repeat 141 170 0.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_0460 213e2a093dd852c1332fdcb4733932b8 246 Pfam PF13181 Tetratricopeptide repeat 68 99 0.013 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_0460 213e2a093dd852c1332fdcb4733932b8 246 SUPERFAMILY SSF48452 51 238 1.71E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_0848 71b046b0206b731876ca360e0726e423 351 Pfam PF00704 Glycosyl hydrolases family 18 33 336 2.5E-28 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 XF_0848 71b046b0206b731876ca360e0726e423 351 Gene3D G3DSA:3.20.20.80 45 343 3.7E-77 T 14-10-2018 XF_0848 71b046b0206b731876ca360e0726e423 351 Gene3D G3DSA:3.10.50.10 244 309 3.7E-77 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily XF_0848 71b046b0206b731876ca360e0726e423 351 SMART SM00636 23 338 5.3E-28 T 14-10-2018 IPR011583 Chitinase II GO:0008061 XF_0848 71b046b0206b731876ca360e0726e423 351 SUPERFAMILY SSF51445 42 343 1.31E-41 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily XF_2178 68423c1d7e8057aa49c6d66a6cae6883 343 Gene3D G3DSA:1.10.8.60 144 212 1.3E-20 T 14-10-2018 XF_2178 68423c1d7e8057aa49c6d66a6cae6883 343 SUPERFAMILY SSF52540 2 210 5.93E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2178 68423c1d7e8057aa49c6d66a6cae6883 343 SUPERFAMILY SSF48019 212 334 2.04E-22 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 XF_2178 68423c1d7e8057aa49c6d66a6cae6883 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 5.7E-22 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 XF_2178 68423c1d7e8057aa49c6d66a6cae6883 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 333 8.8E-96 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 XF_2178 68423c1d7e8057aa49c6d66a6cae6883 343 Gene3D G3DSA:1.20.272.10 214 341 1.6E-23 T 14-10-2018 XF_2178 68423c1d7e8057aa49c6d66a6cae6883 343 Gene3D G3DSA:3.40.50.300 1 138 1.8E-38 T 14-10-2018 XF_a0019 41beb89ab1c5978ccb1775cf73fff46b 188 Pfam PF02796 Helix-turn-helix domain of resolvase 141 184 1.8E-8 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 XF_a0019 41beb89ab1c5978ccb1775cf73fff46b 188 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 XF_a0019 41beb89ab1c5978ccb1775cf73fff46b 188 SUPERFAMILY SSF53041 4 138 3.92E-46 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 XF_a0019 41beb89ab1c5978ccb1775cf73fff46b 188 Pfam PF00239 Resolvase, N terminal domain 6 138 2.7E-47 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 XF_a0019 41beb89ab1c5978ccb1775cf73fff46b 188 SUPERFAMILY SSF46689 141 185 1.85E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XF_a0019 41beb89ab1c5978ccb1775cf73fff46b 188 Gene3D G3DSA:3.40.50.1390 4 128 1.7E-52 T 14-10-2018 XF_a0019 41beb89ab1c5978ccb1775cf73fff46b 188 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 XF_a0019 41beb89ab1c5978ccb1775cf73fff46b 188 SMART SM00857 5 139 2.8E-61 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 XF_a0019 41beb89ab1c5978ccb1775cf73fff46b 188 Gene3D G3DSA:1.10.10.60 141 188 4.9E-12 T 14-10-2018 XF_2282 2e35163fff401c452977aef63c7fa773 264 SUPERFAMILY SSF52540 1 249 6.83E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2282 2e35163fff401c452977aef63c7fa773 264 Gene3D G3DSA:3.40.50.300 1 263 1.1E-75 T 14-10-2018 XF_2282 2e35163fff401c452977aef63c7fa773 264 Pfam PF13614 AAA domain 3 177 4.1E-62 T 14-10-2018 IPR025669 AAA domain XF_2282 2e35163fff401c452977aef63c7fa773 264 PIRSF PIRSF009320 89 260 7.9E-10 T 14-10-2018 XF_2282 2e35163fff401c452977aef63c7fa773 264 PIRSF PIRSF009320 2 82 4.2E-16 T 14-10-2018 XF_0435 9fe22b9de8eea53c42a73f0a72594b1b 348 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 6.3E-129 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 XF_0435 9fe22b9de8eea53c42a73f0a72594b1b 348 Pfam PF00814 Glycoprotease family 29 311 2.1E-99 T 14-10-2018 IPR000905 Gcp-like domain XF_0435 9fe22b9de8eea53c42a73f0a72594b1b 348 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 310 1.5E-111 T 14-10-2018 IPR017861 Kae1/TsaD family XF_0435 9fe22b9de8eea53c42a73f0a72594b1b 348 Gene3D G3DSA:3.30.420.40 133 297 1.0E-122 T 14-10-2018 XF_0435 9fe22b9de8eea53c42a73f0a72594b1b 348 Gene3D G3DSA:3.30.420.40 3 319 1.0E-122 T 14-10-2018 XF_0435 9fe22b9de8eea53c42a73f0a72594b1b 348 SUPERFAMILY SSF53067 3 127 1.75E-29 T 14-10-2018 XF_0435 9fe22b9de8eea53c42a73f0a72594b1b 348 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 62.553 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 XF_0435 9fe22b9de8eea53c42a73f0a72594b1b 348 SUPERFAMILY SSF53067 105 313 7.77E-38 T 14-10-2018 XF_0435 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 4.5E-52 T 14-10-2018 IPR017861 Kae1/TsaD family XF_0435 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 4.5E-52 T 14-10-2018 IPR017861 Kae1/TsaD family XF_0435 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 4.5E-52 T 14-10-2018 IPR017861 Kae1/TsaD family XF_0435 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 179 4.5E-52 T 14-10-2018 IPR017861 Kae1/TsaD family XF_0435 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 135 147 4.5E-52 T 14-10-2018 IPR017861 Kae1/TsaD family XF_0435 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 4.5E-52 T 14-10-2018 IPR017861 Kae1/TsaD family XF_1126 a6a51ca1298d796b6669db125dc2e652 1251 Pfam PF13502 AsmA-like C-terminal region 983 1225 1.1E-58 T 14-10-2018 IPR032712 AsmA-like, C-terminal XF_1126 a6a51ca1298d796b6669db125dc2e652 1251 Pfam PF13116 Protein of unknown function 479 754 9.5E-37 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 XF_1126 a6a51ca1298d796b6669db125dc2e652 1251 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1235 5.6E-280 T 14-10-2018 IPR011836 Conserved hypothetical protein CHP02099 XF_2148 3567ff14f2892af0786a6c08ced65b30 290 SUPERFAMILY SSF53335 41 287 1.16E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_2148 3567ff14f2892af0786a6c08ced65b30 290 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 33 289 53.176 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 XF_2148 3567ff14f2892af0786a6c08ced65b30 290 Gene3D G3DSA:1.10.8.100 226 289 6.9E-21 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 XF_2148 3567ff14f2892af0786a6c08ced65b30 290 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 35 287 3.7E-82 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 XF_2148 3567ff14f2892af0786a6c08ced65b30 290 Pfam PF00398 Ribosomal RNA adenine dimethylase 35 287 6.5E-66 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm XF_2148 3567ff14f2892af0786a6c08ced65b30 290 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 65 92 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 XF_2148 3567ff14f2892af0786a6c08ced65b30 290 Gene3D G3DSA:3.40.50.150 30 223 3.0E-64 T 14-10-2018 XF_2148 3567ff14f2892af0786a6c08ced65b30 290 SMART SM00650 49 222 6.7E-85 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 XF_1337 6c28a707d23f274a602a90a835ad1f8d 208 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 113 1.0E-24 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XF_1337 6c28a707d23f274a602a90a835ad1f8d 208 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 13 202 7.5E-58 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XF_1337 6c28a707d23f274a602a90a835ad1f8d 208 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 13 208 33.733 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XF_1337 6c28a707d23f274a602a90a835ad1f8d 208 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 167 208 4.8E-10 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XF_1337 6c28a707d23f274a602a90a835ad1f8d 208 Gene3D G3DSA:2.30.110.10 5 208 3.7E-66 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 XF_1337 6c28a707d23f274a602a90a835ad1f8d 208 PIRSF PIRSF000190 7 208 1.6E-61 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XF_1337 6c28a707d23f274a602a90a835ad1f8d 208 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 177 190 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XF_1337 6c28a707d23f274a602a90a835ad1f8d 208 SUPERFAMILY SSF50475 12 208 5.11E-55 T 14-10-2018 XF_1442 3663110b506ea34a8e48ba3143c041b7 106 SUPERFAMILY SSF54736 21 105 6.28E-31 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XF_1442 3663110b506ea34a8e48ba3143c041b7 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 16 101 27.365 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS XF_1442 3663110b506ea34a8e48ba3143c041b7 106 Gene3D G3DSA:3.30.1390.10 1 106 3.4E-40 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XF_1442 3663110b506ea34a8e48ba3143c041b7 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 5.2E-32 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 XF_2332 0e6a978905e0ab40fde031449dc8fd15 264 Gene3D G3DSA:3.30.572.10 1 264 3.6E-128 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XF_2332 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 7.0E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XF_2332 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 7.0E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XF_2332 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 7.0E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XF_2332 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 7.0E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XF_2332 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 7.0E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XF_2332 0e6a978905e0ab40fde031449dc8fd15 264 SUPERFAMILY SSF55831 2 264 9.03E-127 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XF_2332 0e6a978905e0ab40fde031449dc8fd15 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.148 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XF_2332 0e6a978905e0ab40fde031449dc8fd15 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 4.6E-42 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XF_2332 0e6a978905e0ab40fde031449dc8fd15 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 6.5E-99 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XF_2332 0e6a978905e0ab40fde031449dc8fd15 264 Pfam PF00303 Thymidylate synthase 2 264 9.7E-121 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XF_2332 0e6a978905e0ab40fde031449dc8fd15 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XF_1112 8bb245d5bd1a5138d8c35d0109739047 506 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 505 43.066 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XF_1112 8bb245d5bd1a5138d8c35d0109739047 506 Gene3D G3DSA:3.30.930.10 156 500 5.0E-128 T 14-10-2018 XF_1112 8bb245d5bd1a5138d8c35d0109739047 506 SUPERFAMILY SSF55681 163 503 6.58E-115 T 14-10-2018 XF_1112 8bb245d5bd1a5138d8c35d0109739047 506 SUPERFAMILY SSF50249 12 156 4.97E-38 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1112 8bb245d5bd1a5138d8c35d0109739047 506 Pfam PF01336 OB-fold nucleic acid binding domain 70 147 6.8E-15 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XF_1112 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 200 210 9.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XF_1112 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 263 280 9.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XF_1112 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 387 403 9.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XF_1112 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 216 232 9.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XF_1112 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 245 258 9.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XF_1112 8bb245d5bd1a5138d8c35d0109739047 506 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 505 1.2E-199 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XF_1112 8bb245d5bd1a5138d8c35d0109739047 506 Pfam PF00152 tRNA synthetases class II (D, K and N) 164 502 8.1E-79 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_1112 8bb245d5bd1a5138d8c35d0109739047 506 Gene3D G3DSA:2.40.50.140 14 155 2.6E-39 T 14-10-2018 XF_1695 a3a77064f3ae2d35f9c5b6c8900bf15b 56 Gene3D G3DSA:2.10.260.10 10 56 8.6E-13 T 14-10-2018 XF_1695 a3a77064f3ae2d35f9c5b6c8900bf15b 56 SUPERFAMILY SSF89447 13 54 1.2E-9 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily XF_1695 a3a77064f3ae2d35f9c5b6c8900bf15b 56 SMART SM00966 16 56 1.7E-5 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XF_1695 a3a77064f3ae2d35f9c5b6c8900bf15b 56 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 16 54 3.8E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XF_2715 21ae2aaa18b478c4c14376b1fee9d37e 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 8.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XF_2715 21ae2aaa18b478c4c14376b1fee9d37e 189 SUPERFAMILY SSF46689 3 76 3.29E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XF_2715 21ae2aaa18b478c4c14376b1fee9d37e 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.9E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XF_2715 21ae2aaa18b478c4c14376b1fee9d37e 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.9E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XF_2715 21ae2aaa18b478c4c14376b1fee9d37e 189 Gene3D G3DSA:1.10.357.10 1 189 9.2E-53 T 14-10-2018 XF_0953 70be1beb0eb2645a62f6c0ec90596393 377 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 204 37.212 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XF_0953 70be1beb0eb2645a62f6c0ec90596393 377 Gene3D G3DSA:3.90.870.10 1 207 4.7E-84 T 14-10-2018 XF_0953 70be1beb0eb2645a62f6c0ec90596393 377 SUPERFAMILY SSF142695 205 365 5.1E-37 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XF_0953 70be1beb0eb2645a62f6c0ec90596393 377 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 10 200 1.3E-68 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XF_0953 70be1beb0eb2645a62f6c0ec90596393 377 Pfam PF00925 GTP cyclohydrolase II 209 363 1.6E-25 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XF_0953 70be1beb0eb2645a62f6c0ec90596393 377 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 11 199 1.9E-81 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XF_0953 70be1beb0eb2645a62f6c0ec90596393 377 SUPERFAMILY SSF55821 6 203 4.35E-82 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XF_0953 70be1beb0eb2645a62f6c0ec90596393 377 PIRSF PIRSF001259 2 370 8.5E-109 T 14-10-2018 XF_1579 5c35aae2ca6cf9caf505c7ee14d14239 124 Pfam PF13262 Protein of unknown function (DUF4054) 10 114 1.4E-27 T 14-10-2018 IPR025127 Protein of unknown function DUF4054 XF_1684 5c35aae2ca6cf9caf505c7ee14d14239 124 Pfam PF13262 Protein of unknown function (DUF4054) 10 114 1.4E-27 T 14-10-2018 IPR025127 Protein of unknown function DUF4054 XF_1994 4b867b2d45c4eeba0ec22fb05161e9f3 291 Gene3D G3DSA:3.90.550.10 3 183 8.6E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_1994 4b867b2d45c4eeba0ec22fb05161e9f3 291 SUPERFAMILY SSF53448 20 164 3.94E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_1994 4b867b2d45c4eeba0ec22fb05161e9f3 291 Pfam PF00535 Glycosyl transferase family 2 21 103 1.9E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XF_2133 7fa477abb08b2dadc077b0474ff09515 645 SUPERFAMILY SSF52540 347 530 3.7E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2133 7fa477abb08b2dadc077b0474ff09515 645 Pfam PF12848 ABC transporter 217 293 5.7E-24 T 14-10-2018 IPR032781 ABC-transporter extension domain XF_2133 7fa477abb08b2dadc077b0474ff09515 645 SUPERFAMILY SSF52540 2 238 3.58E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2133 7fa477abb08b2dadc077b0474ff09515 645 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_2133 7fa477abb08b2dadc077b0474ff09515 645 SMART SM00382 26 223 7.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_2133 7fa477abb08b2dadc077b0474ff09515 645 SMART SM00382 359 524 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_2133 7fa477abb08b2dadc077b0474ff09515 645 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_2133 7fa477abb08b2dadc077b0474ff09515 645 Gene3D G3DSA:3.40.50.300 1 259 5.1E-60 T 14-10-2018 XF_2133 7fa477abb08b2dadc077b0474ff09515 645 Gene3D G3DSA:3.40.50.300 275 562 5.3E-46 T 14-10-2018 XF_2133 7fa477abb08b2dadc077b0474ff09515 645 Pfam PF00005 ABC transporter 17 178 2.6E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_2133 7fa477abb08b2dadc077b0474ff09515 645 Pfam PF00005 ABC transporter 350 481 1.5E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_0214 cd14135b7fec982aa97de47db88281a3 240 Pfam PF12710 haloacid dehalogenase-like hydrolase 15 198 7.5E-24 T 14-10-2018 XF_0214 cd14135b7fec982aa97de47db88281a3 240 Gene3D G3DSA:3.40.50.1000 15 215 3.1E-23 T 14-10-2018 IPR023214 HAD superfamily XF_0214 cd14135b7fec982aa97de47db88281a3 240 SUPERFAMILY SSF56784 14 217 1.38E-18 T 14-10-2018 IPR036412 HAD-like superfamily XF_0214 cd14135b7fec982aa97de47db88281a3 240 Gene3D G3DSA:1.20.1440.100 26 103 3.1E-23 T 14-10-2018 XF_2249 cfdfb48e472081617a60b752c653e936 670 SUPERFAMILY SSF52518 354 540 1.1E-53 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold XF_2249 cfdfb48e472081617a60b752c653e936 670 ProSitePatterns PS00802 Transketolase signature 2. 462 478 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XF_2249 cfdfb48e472081617a60b752c653e936 670 Pfam PF02780 Transketolase, C-terminal domain 533 648 4.5E-22 T 14-10-2018 IPR033248 Transketolase, C-terminal domain XF_2249 cfdfb48e472081617a60b752c653e936 670 SUPERFAMILY SSF52922 528 654 1.07E-25 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XF_2249 cfdfb48e472081617a60b752c653e936 670 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 46 652 7.0E-247 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XF_2249 cfdfb48e472081617a60b752c653e936 670 Gene3D G3DSA:3.40.50.920 532 656 3.3E-35 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XF_2249 cfdfb48e472081617a60b752c653e936 670 Gene3D G3DSA:3.40.50.970 353 527 2.0E-62 T 14-10-2018 XF_2249 cfdfb48e472081617a60b752c653e936 670 SUPERFAMILY SSF52518 40 418 2.05E-69 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold XF_2249 cfdfb48e472081617a60b752c653e936 670 ProSitePatterns PS00801 Transketolase signature 1. 70 89 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XF_2249 cfdfb48e472081617a60b752c653e936 670 SMART SM00861 356 520 3.5E-58 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XF_2249 cfdfb48e472081617a60b752c653e936 670 Pfam PF02779 Transketolase, pyrimidine binding domain 355 515 2.1E-36 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XF_2249 cfdfb48e472081617a60b752c653e936 670 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 44 657 44.289 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XF_2249 cfdfb48e472081617a60b752c653e936 670 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 45 320 6.4E-111 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XF_1271 06ac232682ec2f8c4b06c3614e9ee775 92 SUPERFAMILY SSF117991 7 92 7.06E-18 T 14-10-2018 IPR027471 YbeD-like domain superfamily XF_1271 06ac232682ec2f8c4b06c3614e9ee775 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 4 92 17.454 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 XF_1271 06ac232682ec2f8c4b06c3614e9ee775 92 Pfam PF04359 Protein of unknown function (DUF493) 11 92 2.3E-19 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 XF_1271 06ac232682ec2f8c4b06c3614e9ee775 92 Gene3D G3DSA:3.30.70.260 4 92 2.1E-12 T 14-10-2018 XF_0063 6f5cbdde821077d9d799e41d776d2b64 241 Gene3D G3DSA:3.40.50.2020 115 240 5.5E-14 T 14-10-2018 XF_0063 6f5cbdde821077d9d799e41d776d2b64 241 SUPERFAMILY SSF53271 70 239 2.36E-27 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like XF_0063 6f5cbdde821077d9d799e41d776d2b64 241 Pfam PF00156 Phosphoribosyl transferase domain 196 233 2.8E-6 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XF_1648 daf347d1865fed0b08d643cb0b9ad886 308 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 6 203 4.8E-72 T 14-10-2018 IPR010183 Bacteriophage lambda, Bet XF_1648 daf347d1865fed0b08d643cb0b9ad886 308 Pfam PF03837 RecT family 18 206 1.2E-23 T 14-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 XF_1571 abef379ab69ab3878b39ad01fae97113 467 TIGRFAM TIGR01555 phge_rel_HI1409: phage-associated protein, HI1409 family 29 434 2.7E-206 T 14-10-2018 IPR006445 Phage-associated protein HI1409 XF_1571 abef379ab69ab3878b39ad01fae97113 467 Pfam PF06381 Protein of unknown function (DUF1073) 60 409 1.0E-123 T 14-10-2018 IPR024459 Protein of unknown function DUF1073 XF_1676 abef379ab69ab3878b39ad01fae97113 467 TIGRFAM TIGR01555 phge_rel_HI1409: phage-associated protein, HI1409 family 29 434 2.7E-206 T 14-10-2018 IPR006445 Phage-associated protein HI1409 XF_1676 abef379ab69ab3878b39ad01fae97113 467 Pfam PF06381 Protein of unknown function (DUF1073) 60 409 1.0E-123 T 14-10-2018 IPR024459 Protein of unknown function DUF1073 XF_1500 9cd1b8c7a3fce8cf1a7b265a703aadbe 317 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 44 272 3.6E-59 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 XF_1500 9cd1b8c7a3fce8cf1a7b265a703aadbe 317 SUPERFAMILY SSF52402 19 225 1.53E-69 T 14-10-2018 XF_1500 9cd1b8c7a3fce8cf1a7b265a703aadbe 317 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 24 317 2.0E-149 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XF_1500 9cd1b8c7a3fce8cf1a7b265a703aadbe 317 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 19 317 55.226 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XF_1500 9cd1b8c7a3fce8cf1a7b265a703aadbe 317 PIRSF PIRSF002936 14 317 7.6E-147 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XF_1500 9cd1b8c7a3fce8cf1a7b265a703aadbe 317 Gene3D G3DSA:3.40.50.620 22 227 2.0E-60 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0553 b2619d2aa8ad5d24a454f6129dc2fd0c 576 Gene3D G3DSA:3.40.50.2300 253 561 2.0E-69 T 14-10-2018 XF_0553 b2619d2aa8ad5d24a454f6129dc2fd0c 576 Pfam PF04348 LppC putative lipoprotein 42 568 1.9E-184 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA XF_0553 b2619d2aa8ad5d24a454f6129dc2fd0c 576 SUPERFAMILY SSF53822 250 573 2.46E-61 T 14-10-2018 IPR028082 Periplasmic binding protein-like I XF_0553 b2619d2aa8ad5d24a454f6129dc2fd0c 576 Gene3D G3DSA:3.40.50.2300 358 562 2.0E-69 T 14-10-2018 XF_1672 0b1ea070a77b367d5896a9f723f143e0 77 ProDom PD272324 XF1567/XF1672 8 77 3.0E-34 T 14-10-2018 IPR020247 Uncharacterised protein family XF1567 XF_1567 0b1ea070a77b367d5896a9f723f143e0 77 ProDom PD272324 XF1567/XF1672 8 77 3.0E-34 T 14-10-2018 IPR020247 Uncharacterised protein family XF1567 XF_2355 0fc9b85d04c16a5dd472e99e7f068619 335 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 332 44.481 T 14-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 XF_2355 0fc9b85d04c16a5dd472e99e7f068619 335 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 233 250 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 XF_2355 0fc9b85d04c16a5dd472e99e7f068619 335 SUPERFAMILY SSF51445 1 290 4.32E-79 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily XF_2355 0fc9b85d04c16a5dd472e99e7f068619 335 Gene3D G3DSA:3.20.20.300 1 327 1.2E-105 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 XF_2355 0fc9b85d04c16a5dd472e99e7f068619 335 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 3 287 1.1E-75 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XF_0397 1908f31c9696f59d94f50c2a5c864e6a 137 Gene3D G3DSA:3.40.50.12330 29 87 1.2E-10 T 14-10-2018 XF_0397 1908f31c9696f59d94f50c2a5c864e6a 137 SUPERFAMILY SSF52172 35 86 1.85E-10 T 14-10-2018 IPR011006 CheY-like superfamily XF_1313 dac68daddcd321c025192d9794fc6e88 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 326 350 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_1313 dac68daddcd321c025192d9794fc6e88 373 Pfam PF01098 Cell cycle protein 23 369 1.2E-97 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_1313 dac68daddcd321c025192d9794fc6e88 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 14 371 26.914 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_1313 dac68daddcd321c025192d9794fc6e88 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 368 2.8E-117 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0319 b89fea7ce2e5896e6af57afd97348401 246 Gene3D G3DSA:3.40.50.720 1 246 1.7E-73 T 14-10-2018 XF_0319 b89fea7ce2e5896e6af57afd97348401 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XF_0319 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.8E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0319 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.8E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0319 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.8E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0319 b89fea7ce2e5896e6af57afd97348401 246 SUPERFAMILY SSF51735 4 244 3.41E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0319 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0319 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0319 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0319 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0319 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0319 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0319 b89fea7ce2e5896e6af57afd97348401 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 243 2.0E-54 T 14-10-2018 XF_0319 b89fea7ce2e5896e6af57afd97348401 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 3.5E-98 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 XF_1270 34daea6003ab24c035eeb3cfa2bb4e10 229 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 88 141 2.0E-24 T 14-10-2018 XF_1270 34daea6003ab24c035eeb3cfa2bb4e10 229 Pfam PF03099 Biotin/lipoate A/B protein ligase family 74 172 9.7E-9 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 XF_1270 34daea6003ab24c035eeb3cfa2bb4e10 229 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 84 99 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 XF_1270 34daea6003ab24c035eeb3cfa2bb4e10 229 SUPERFAMILY SSF55681 18 216 5.22E-67 T 14-10-2018 XF_1270 34daea6003ab24c035eeb3cfa2bb4e10 229 PIRSF PIRSF016262 16 225 3.5E-57 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XF_1270 34daea6003ab24c035eeb3cfa2bb4e10 229 Gene3D G3DSA:3.30.930.10 15 217 2.7E-63 T 14-10-2018 XF_1270 34daea6003ab24c035eeb3cfa2bb4e10 229 Hamap MF_00013 Octanoyltransferase [lipB]. 18 219 37.605 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XF_1270 34daea6003ab24c035eeb3cfa2bb4e10 229 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 40 214 3.7E-62 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XF_1222 11f5730d0f1f3f6ffd84f5f22b387ac8 259 PIRSF PIRSF006648 1 259 1.0E-26 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XF_1222 11f5730d0f1f3f6ffd84f5f22b387ac8 259 Pfam PF01061 ABC-2 type transporter 15 224 1.3E-35 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 XF_1222 11f5730d0f1f3f6ffd84f5f22b387ac8 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 1.2E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XF_1222 11f5730d0f1f3f6ffd84f5f22b387ac8 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 64 86 1.2E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XF_1222 11f5730d0f1f3f6ffd84f5f22b387ac8 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 108 133 1.2E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 XF_1959 4998ddcddc73da8097ec2587cb156bcb 722 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 720 25.134 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1959 4998ddcddc73da8097ec2587cb156bcb 722 Pfam PF05746 DALR anticodon binding domain 614 709 2.3E-6 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 XF_1959 4998ddcddc73da8097ec2587cb156bcb 722 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 582 2.2E-187 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1959 4998ddcddc73da8097ec2587cb156bcb 722 SUPERFAMILY SSF109604 345 493 5.73E-14 T 14-10-2018 XF_1959 4998ddcddc73da8097ec2587cb156bcb 722 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 5 720 7.8E-201 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1959 4998ddcddc73da8097ec2587cb156bcb 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 53 65 6.3E-28 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1959 4998ddcddc73da8097ec2587cb156bcb 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 320 336 6.3E-28 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1959 4998ddcddc73da8097ec2587cb156bcb 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 6.3E-28 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1959 4998ddcddc73da8097ec2587cb156bcb 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 6.3E-28 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1959 4998ddcddc73da8097ec2587cb156bcb 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 396 415 6.3E-28 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XF_1874 59546721cead699dba985bb3925c623f 103 Gene3D G3DSA:1.10.287.950 2 82 3.1E-5 T 14-10-2018 XF_0771 427e0465359349f4479975a0ff1828b2 106 SUPERFAMILY SSF47336 23 103 4.97E-11 T 14-10-2018 IPR036736 ACP-like superfamily XF_0771 427e0465359349f4479975a0ff1828b2 106 Gene3D G3DSA:1.10.1200.10 24 105 4.0E-16 T 14-10-2018 IPR036736 ACP-like superfamily XF_0771 427e0465359349f4479975a0ff1828b2 106 Pfam PF00550 Phosphopantetheine attachment site 27 82 4.9E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain XF_1262 fe02b6c70e81cd6bb0eec89475adce02 168 Gene3D G3DSA:3.90.79.10 15 159 1.6E-29 T 14-10-2018 XF_1262 fe02b6c70e81cd6bb0eec89475adce02 168 Pfam PF00293 NUDIX domain 19 140 1.2E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XF_1262 fe02b6c70e81cd6bb0eec89475adce02 168 PRINTS PR01402 Mutator MutX protein signature 111 131 5.3E-8 T 14-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 XF_1262 fe02b6c70e81cd6bb0eec89475adce02 168 PRINTS PR01402 Mutator MutX protein signature 131 148 5.3E-8 T 14-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 XF_1262 fe02b6c70e81cd6bb0eec89475adce02 168 PRINTS PR01402 Mutator MutX protein signature 80 106 5.3E-8 T 14-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 XF_1262 fe02b6c70e81cd6bb0eec89475adce02 168 PRINTS PR01402 Mutator MutX protein signature 33 48 5.3E-8 T 14-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 XF_1262 fe02b6c70e81cd6bb0eec89475adce02 168 SUPERFAMILY SSF55811 5 144 3.52E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XF_1262 fe02b6c70e81cd6bb0eec89475adce02 168 ProSitePatterns PS00893 Nudix box signature. 49 70 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XF_1062 5efeaab8c99df201d3b82f455b22b172 630 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 3 603 55.524 T 14-10-2018 XF_1062 5efeaab8c99df201d3b82f455b22b172 630 SUPERFAMILY SSF143975 4 420 6.67E-136 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XF_1062 5efeaab8c99df201d3b82f455b22b172 630 Gene3D G3DSA:3.50.30.80 421 570 3.9E-46 T 14-10-2018 XF_1062 5efeaab8c99df201d3b82f455b22b172 630 Pfam PF00920 Dehydratase family 68 598 3.9E-149 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XF_1062 5efeaab8c99df201d3b82f455b22b172 630 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XF_1062 5efeaab8c99df201d3b82f455b22b172 630 SUPERFAMILY SSF52016 421 600 2.59E-50 T 14-10-2018 XF_1062 5efeaab8c99df201d3b82f455b22b172 630 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 602 2.0E-273 T 14-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 XF_1062 5efeaab8c99df201d3b82f455b22b172 630 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XF_1711 cd8b7c05de59a44d810a1a510e0d732e 117 Pfam PF01042 Endoribonuclease L-PSP 13 116 2.1E-22 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 XF_1711 cd8b7c05de59a44d810a1a510e0d732e 117 SUPERFAMILY SSF55298 6 117 2.51E-28 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XF_1711 cd8b7c05de59a44d810a1a510e0d732e 117 Gene3D G3DSA:3.30.1330.40 2 117 3.0E-37 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XF_0478 e9e6b67653e4846f7e80094d171af8b2 1472 SUPERFAMILY SSF50998 986 1253 4.97E-7 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XF_0478 e9e6b67653e4846f7e80094d171af8b2 1472 Pfam PF05567 Neisseria PilC beta-propeller domain 942 1274 4.2E-63 T 14-10-2018 IPR008707 PilC beta-propeller domain XF_0125 51acdf8ef2e084d8200fe69e1f47fa82 76 TIGRFAM TIGR00202 csrA: carbon storage regulator 6 62 1.4E-26 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XF_0125 51acdf8ef2e084d8200fe69e1f47fa82 76 Pfam PF02599 Global regulator protein family 6 57 3.4E-26 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XF_0125 51acdf8ef2e084d8200fe69e1f47fa82 76 SUPERFAMILY SSF117130 5 58 1.44E-20 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 XF_0125 51acdf8ef2e084d8200fe69e1f47fa82 76 Gene3D G3DSA:3.30.70.1680 6 63 6.3E-28 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 XF_0125 51acdf8ef2e084d8200fe69e1f47fa82 76 Hamap MF_00167 Translational regulator CsrA [csrA]. 6 76 16.759 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XF_0125 51acdf8ef2e084d8200fe69e1f47fa82 76 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 6 53 7.0E-21 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 SUPERFAMILY SSF52172 379 497 4.27E-14 T 14-10-2018 IPR011006 CheY-like superfamily XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 Gene3D G3DSA:3.40.50.2300 10 138 1.9E-18 T 14-10-2018 XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 Gene3D G3DSA:3.40.50.2300 379 498 7.1E-11 T 14-10-2018 XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 Gene3D G3DSA:3.30.565.10 216 369 2.6E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 SMART SM00448 11 122 1.1E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 SMART SM00448 381 493 0.0057 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 Pfam PF00072 Response regulator receiver domain 383 492 1.2E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 Pfam PF00072 Response regulator receiver domain 13 116 1.5E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 SMART SM00387 256 363 1.4E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 SUPERFAMILY SSF55874 207 361 1.57E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 SUPERFAMILY SSF47384 145 213 7.85E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 SMART SM00388 150 215 0.0057 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 259 361 2.4E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 SUPERFAMILY SSF52172 11 143 1.01E-21 T 14-10-2018 IPR011006 CheY-like superfamily XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 341 3.5E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 308 3.5E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 360 3.5E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 322 3.5E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1455 6311fc0be0a80af6c6b84b31dc5a38e1 498 Gene3D G3DSA:1.10.287.130 139 212 4.5E-9 T 14-10-2018 XF_0404 30f1753f4097497d154a39e4266e5373 154 Pfam PF04519 Polymer-forming cytoskeletal 25 124 1.8E-22 T 14-10-2018 IPR007607 Bactofilin A/B XF_1733 fbd7b4fb68515bef25693e58421c1ff3 192 Pfam PF03358 NADPH-dependent FMN reductase 47 107 1.3E-10 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 XF_1733 fbd7b4fb68515bef25693e58421c1ff3 192 SUPERFAMILY SSF52218 3 186 1.02E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily XF_1733 fbd7b4fb68515bef25693e58421c1ff3 192 Gene3D G3DSA:3.40.50.360 2 189 3.1E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily XF_1733 fbd7b4fb68515bef25693e58421c1ff3 192 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 XF_1206 da32b772dfe00c1548ef25bd4d9f8b6b 78 SUPERFAMILY SSF143800 2 77 6.87E-31 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1206 da32b772dfe00c1548ef25bd4d9f8b6b 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 4.2E-26 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1206 da32b772dfe00c1548ef25bd4d9f8b6b 78 Pfam PF00830 Ribosomal L28 family 3 62 1.2E-26 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1206 da32b772dfe00c1548ef25bd4d9f8b6b 78 Gene3D G3DSA:2.30.170.40 2 78 4.4E-34 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1206 da32b772dfe00c1548ef25bd4d9f8b6b 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.386 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1288 b31bb65d4a58a3c69119d496eb4b4715 554 Pfam PF06418 CTP synthase N-terminus 5 265 2.2E-121 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 XF_1288 b31bb65d4a58a3c69119d496eb4b4715 554 Pfam PF00117 Glutamine amidotransferase class-I 303 538 7.3E-53 T 14-10-2018 IPR017926 Glutamine amidotransferase XF_1288 b31bb65d4a58a3c69119d496eb4b4715 554 Hamap MF_01227 CTP synthase [pyrG]. 2 543 51.252 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 XF_1288 b31bb65d4a58a3c69119d496eb4b4715 554 Gene3D G3DSA:3.40.50.880 288 546 4.5E-96 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_1288 b31bb65d4a58a3c69119d496eb4b4715 554 SUPERFAMILY SSF52317 290 543 1.36E-79 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_1288 b31bb65d4a58a3c69119d496eb4b4715 554 Gene3D G3DSA:3.40.50.300 1 285 1.2E-123 T 14-10-2018 XF_1288 b31bb65d4a58a3c69119d496eb4b4715 554 TIGRFAM TIGR00337 PyrG: CTP synthase 4 538 5.3E-238 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 XF_1288 b31bb65d4a58a3c69119d496eb4b4715 554 SUPERFAMILY SSF52540 2 266 3.8E-118 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1646 ed8a090b7148ab05e4d8c5fd697b49a4 266 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 215 243 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XF_1646 ed8a090b7148ab05e4d8c5fd697b49a4 266 Gene3D G3DSA:2.160.10.10 93 175 1.0E-15 T 14-10-2018 XF_1646 ed8a090b7148ab05e4d8c5fd697b49a4 266 Gene3D G3DSA:2.160.10.10 176 266 6.4E-14 T 14-10-2018 XF_1646 ed8a090b7148ab05e4d8c5fd697b49a4 266 SUPERFAMILY SSF51161 78 261 1.32E-42 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily XF_1646 ed8a090b7148ab05e4d8c5fd697b49a4 266 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 158 191 0.001 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1646 ed8a090b7148ab05e4d8c5fd697b49a4 266 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 194 227 2.2E-4 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1646 ed8a090b7148ab05e4d8c5fd697b49a4 266 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 124 155 3.4E-7 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1518 9cb1c1b2e725c3ec4143f06f75daaa54 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 XF_1518 9cb1c1b2e725c3ec4143f06f75daaa54 405 Gene3D G3DSA:1.20.81.30 260 366 1.0E-25 T 14-10-2018 XF_1518 9cb1c1b2e725c3ec4143f06f75daaa54 405 Gene3D G3DSA:1.20.81.30 58 173 1.5E-24 T 14-10-2018 XF_1518 9cb1c1b2e725c3ec4143f06f75daaa54 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 9.7E-21 T 14-10-2018 IPR003004 GspF/PilC family XF_1518 9cb1c1b2e725c3ec4143f06f75daaa54 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 9.7E-21 T 14-10-2018 IPR003004 GspF/PilC family XF_1518 9cb1c1b2e725c3ec4143f06f75daaa54 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 9.7E-21 T 14-10-2018 IPR003004 GspF/PilC family XF_1518 9cb1c1b2e725c3ec4143f06f75daaa54 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 9.7E-21 T 14-10-2018 IPR003004 GspF/PilC family XF_1518 9cb1c1b2e725c3ec4143f06f75daaa54 405 Pfam PF00482 Type II secretion system (T2SS), protein F 275 396 1.1E-25 T 14-10-2018 IPR018076 Type II secretion system F domain XF_1518 9cb1c1b2e725c3ec4143f06f75daaa54 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.1E-29 T 14-10-2018 IPR018076 Type II secretion system F domain XF_2100 83ad4a4789890cac75ae7670d25d68a6 301 SUPERFAMILY SSF51197 92 230 2.09E-20 T 14-10-2018 XF_2100 83ad4a4789890cac75ae7670d25d68a6 301 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 72 224 4.9E-47 T 14-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 XF_2100 83ad4a4789890cac75ae7670d25d68a6 301 Gene3D G3DSA:2.60.120.330 44 233 3.8E-43 T 14-10-2018 IPR027443 Isopenicillin N synthase-like XF_a0036 025ce9261aa90aeee01df9bc5130dc1d 199 SUPERFAMILY SSF53955 7 124 3.13E-24 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_1961 01d47b5eee30b0dd3875b005429035d3 545 SUPERFAMILY SSF56317 4 245 1.01E-60 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XF_1961 01d47b5eee30b0dd3875b005429035d3 545 Gene3D G3DSA:3.60.110.10 1 254 1.1E-83 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XF_1961 01d47b5eee30b0dd3875b005429035d3 545 Pfam PF02540 NAD synthase 270 520 1.3E-68 T 14-10-2018 IPR022310 NAD/GMP synthase XF_1961 01d47b5eee30b0dd3875b005429035d3 545 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 38 53 - T 14-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 XF_1961 01d47b5eee30b0dd3875b005429035d3 545 TIGRFAM TIGR00552 nadE: NAD+ synthetase 277 526 6.9E-58 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 XF_1961 01d47b5eee30b0dd3875b005429035d3 545 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 545 28.858 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XF_1961 01d47b5eee30b0dd3875b005429035d3 545 Pfam PF00795 Carbon-nitrogen hydrolase 6 244 2.7E-25 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 XF_1961 01d47b5eee30b0dd3875b005429035d3 545 SUPERFAMILY SSF52402 268 528 8.6E-74 T 14-10-2018 XF_1961 01d47b5eee30b0dd3875b005429035d3 545 Gene3D G3DSA:3.40.50.620 267 545 1.9E-109 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_1961 01d47b5eee30b0dd3875b005429035d3 545 PIRSF PIRSF006630 2 545 1.3E-179 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XF_1804 308cc671c23c26670403393ad6e20981 293 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 11 209 1.4E-20 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XF_1804 308cc671c23c26670403393ad6e20981 293 Gene3D G3DSA:3.40.50.150 11 229 3.1E-27 T 14-10-2018 XF_1804 308cc671c23c26670403393ad6e20981 293 SUPERFAMILY SSF53335 8 232 6.32E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_1804 308cc671c23c26670403393ad6e20981 293 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XF_1804 308cc671c23c26670403393ad6e20981 293 PIRSF PIRSF000398 2 280 3.7E-66 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 XF_1804 308cc671c23c26670403393ad6e20981 293 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 11 27 4.3E-10 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XF_1804 308cc671c23c26670403393ad6e20981 293 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 33 47 4.3E-10 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XF_1804 308cc671c23c26670403393ad6e20981 293 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 182 194 4.3E-10 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XF_1804 308cc671c23c26670403393ad6e20981 293 Gene3D G3DSA:1.10.1020.10 62 160 3.1E-27 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 XF_1585 9f55c9fdffb6a7a981384a2bf12cdd9a 140 ProDom PD298513 SIMILAR PD1186 XF1585/XF1690 PD0970 9 127 2.0E-55 T 14-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC XF_1585 9f55c9fdffb6a7a981384a2bf12cdd9a 140 Pfam PF10876 Phage tail assemb.y chaperone protein, TAC 7 139 5.5E-67 T 14-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC XF_1690 9f55c9fdffb6a7a981384a2bf12cdd9a 140 ProDom PD298513 SIMILAR PD1186 XF1585/XF1690 PD0970 9 127 2.0E-55 T 14-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC XF_1690 9f55c9fdffb6a7a981384a2bf12cdd9a 140 Pfam PF10876 Phage tail assemb.y chaperone protein, TAC 7 139 5.5E-67 T 14-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC XF_1108 6308cee9b7cff38ed4deae8e6b2281d5 154 Gene3D G3DSA:1.10.287.180 1 70 2.8E-30 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 XF_1108 6308cee9b7cff38ed4deae8e6b2281d5 154 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 151 31.768 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 XF_1108 6308cee9b7cff38ed4deae8e6b2281d5 154 SUPERFAMILY SSF46557 1 72 3.4E-28 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 XF_1108 6308cee9b7cff38ed4deae8e6b2281d5 154 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 79 152 2.7E-26 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 XF_1108 6308cee9b7cff38ed4deae8e6b2281d5 154 Gene3D G3DSA:3.10.50.30 71 153 1.9E-28 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 XF_1108 6308cee9b7cff38ed4deae8e6b2281d5 154 PIRSF PIRSF006092 1 154 5.7E-50 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 XF_1108 6308cee9b7cff38ed4deae8e6b2281d5 154 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 1 151 1.8E-56 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 XF_1108 6308cee9b7cff38ed4deae8e6b2281d5 154 SUPERFAMILY SSF54534 78 152 2.09E-22 T 14-10-2018 XF_1108 6308cee9b7cff38ed4deae8e6b2281d5 154 Pfam PF03449 Transcription elongation factor, N-terminal 1 69 5.8E-31 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 XF_1108 6308cee9b7cff38ed4deae8e6b2281d5 154 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 12 43 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 XF_1001 b0e55ba49e9a4632103de63664b98da8 438 SUPERFAMILY SSF55729 301 417 7.68E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase XF_1001 b0e55ba49e9a4632103de63664b98da8 438 Gene3D G3DSA:3.40.630.30 293 438 2.6E-57 T 14-10-2018 XF_1001 b0e55ba49e9a4632103de63664b98da8 438 TIGRFAM TIGR00761 argB: acetylglutamate kinase 39 260 1.9E-60 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XF_1001 b0e55ba49e9a4632103de63664b98da8 438 SUPERFAMILY SSF53633 12 290 9.35E-52 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XF_1001 b0e55ba49e9a4632103de63664b98da8 438 PIRSF PIRSF036441 18 438 1.6E-280 T 14-10-2018 IPR011242 Acetylglutamate kinase ArgB, GNAT domain-containing GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XF_1001 b0e55ba49e9a4632103de63664b98da8 438 Gene3D G3DSA:3.40.1160.10 1 292 5.6E-90 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XF_1001 b0e55ba49e9a4632103de63664b98da8 438 Pfam PF00696 Amino acid kinase family 40 252 8.0E-28 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XF_1001 b0e55ba49e9a4632103de63664b98da8 438 Pfam PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase 272 431 2.8E-52 T 14-10-2018 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|Reactome: R-HSA-70635 XF_0556 54d1b81105c171f0c597f958f0551aa8 341 Pfam PF03193 RsgA GTPase 96 270 7.1E-45 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 XF_0556 54d1b81105c171f0c597f958f0551aa8 341 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 38 333 30.675 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 XF_0556 54d1b81105c171f0c597f958f0551aa8 341 SUPERFAMILY SSF52540 113 328 4.62E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0556 54d1b81105c171f0c597f958f0551aa8 341 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 81 325 4.6E-43 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 XF_0556 54d1b81105c171f0c597f958f0551aa8 341 Gene3D G3DSA:3.40.50.300 99 270 7.1E-44 T 14-10-2018 XF_0556 54d1b81105c171f0c597f958f0551aa8 341 Gene3D G3DSA:1.10.40.50 271 339 2.3E-18 T 14-10-2018 XF_0834 1baea4dc2140c09c9a8990c801ac3b92 398 Gene3D G3DSA:3.50.50.60 13 344 2.0E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_0834 1baea4dc2140c09c9a8990c801ac3b92 398 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 13 396 1.8E-133 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 XF_0834 1baea4dc2140c09c9a8990c801ac3b92 398 SUPERFAMILY SSF51905 12 391 9.72E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_0834 1baea4dc2140c09c9a8990c801ac3b92 398 Pfam PF01494 FAD binding domain 13 324 2.1E-31 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 XF_0834 1baea4dc2140c09c9a8990c801ac3b92 398 Gene3D G3DSA:3.30.9.50 87 275 2.0E-108 T 14-10-2018 XF_0834 1baea4dc2140c09c9a8990c801ac3b92 398 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 300 313 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 XF_0834 1baea4dc2140c09c9a8990c801ac3b92 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 1.6E-20 T 14-10-2018 XF_0834 1baea4dc2140c09c9a8990c801ac3b92 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 1.6E-20 T 14-10-2018 XF_0834 1baea4dc2140c09c9a8990c801ac3b92 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 13 35 1.6E-20 T 14-10-2018 XF_0834 1baea4dc2140c09c9a8990c801ac3b92 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 162 177 1.6E-20 T 14-10-2018 XF_0305 ca13781ddc90f87c38777df86cd67a99 135 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 18 135 18.722 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 XF_0305 ca13781ddc90f87c38777df86cd67a99 135 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 38 134 1.6E-35 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0305 ca13781ddc90f87c38777df86cd67a99 135 Gene3D G3DSA:1.20.58.1610 11 135 1.0E-41 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_2443 424d2a7f65cc75fbf6a70535315b22bf 295 Pfam PF00795 Carbon-nitrogen hydrolase 8 272 1.8E-54 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 XF_2443 424d2a7f65cc75fbf6a70535315b22bf 295 SUPERFAMILY SSF56317 6 292 3.66E-85 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XF_2443 424d2a7f65cc75fbf6a70535315b22bf 295 Gene3D G3DSA:3.60.110.10 3 293 2.1E-95 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XF_0739 c120e1debfc929b54d1dc8d0533e9f51 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.2E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XF_0739 c120e1debfc929b54d1dc8d0533e9f51 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.2E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XF_0739 c120e1debfc929b54d1dc8d0533e9f51 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.2E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XF_0739 c120e1debfc929b54d1dc8d0533e9f51 65 Pfam PF01632 Ribosomal protein L35 2 62 2.4E-24 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0739 c120e1debfc929b54d1dc8d0533e9f51 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 4.4E-26 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XF_0739 c120e1debfc929b54d1dc8d0533e9f51 65 Gene3D G3DSA:2.40.50.530 1 64 9.9E-22 T 14-10-2018 XF_0739 c120e1debfc929b54d1dc8d0533e9f51 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.905 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XF_0739 c120e1debfc929b54d1dc8d0533e9f51 65 SUPERFAMILY SSF143034 2 64 1.07E-22 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0739 c120e1debfc929b54d1dc8d0533e9f51 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1727 9f2f0b8c8dc7782363f599c816199412 353 Gene3D G3DSA:3.90.180.10 18 340 1.7E-87 T 14-10-2018 XF_1727 9f2f0b8c8dc7782363f599c816199412 353 SUPERFAMILY SSF50129 1 182 5.33E-41 T 14-10-2018 IPR011032 GroES-like superfamily XF_1727 9f2f0b8c8dc7782363f599c816199412 353 SMART SM00829 10 347 2.9E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XF_1727 9f2f0b8c8dc7782363f599c816199412 353 SUPERFAMILY SSF51735 140 314 6.57E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1727 9f2f0b8c8dc7782363f599c816199412 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 126 9.4E-17 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XF_1727 9f2f0b8c8dc7782363f599c816199412 353 Gene3D G3DSA:3.40.50.720 162 294 1.7E-87 T 14-10-2018 XF_1727 9f2f0b8c8dc7782363f599c816199412 353 Pfam PF00107 Zinc-binding dehydrogenase 177 303 3.8E-16 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XF_1727 9f2f0b8c8dc7782363f599c816199412 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XF_1404 0f7794049b7b8a9f78d2036e4daab220 130 SUPERFAMILY SSF53062 4 125 3.66E-24 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 XF_1404 0f7794049b7b8a9f78d2036e4daab220 130 Pfam PF03610 PTS system fructose IIA component 4 104 5.8E-14 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 XF_1404 0f7794049b7b8a9f78d2036e4daab220 130 Gene3D G3DSA:3.40.50.510 3 129 3.1E-24 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 XF_1532 ae85af7f2ffbfe5e774c48e0b03884bf 325 Pfam PF03466 LysR substrate binding domain 101 307 2.9E-49 T 14-10-2018 IPR005119 LysR, substrate-binding XF_1532 ae85af7f2ffbfe5e774c48e0b03884bf 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 7.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1532 ae85af7f2ffbfe5e774c48e0b03884bf 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 7.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1532 ae85af7f2ffbfe5e774c48e0b03884bf 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 7.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1532 ae85af7f2ffbfe5e774c48e0b03884bf 325 SUPERFAMILY SSF53850 102 310 5.12E-44 T 14-10-2018 XF_1532 ae85af7f2ffbfe5e774c48e0b03884bf 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 76 2.1E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1532 ae85af7f2ffbfe5e774c48e0b03884bf 325 Gene3D G3DSA:1.10.10.10 11 99 3.1E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1532 ae85af7f2ffbfe5e774c48e0b03884bf 325 SUPERFAMILY SSF46785 14 124 7.6E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_1532 ae85af7f2ffbfe5e774c48e0b03884bf 325 Gene3D G3DSA:3.40.190.10 175 277 1.1E-67 T 14-10-2018 XF_1532 ae85af7f2ffbfe5e774c48e0b03884bf 325 Gene3D G3DSA:3.40.190.10 105 304 1.1E-67 T 14-10-2018 XF_1524 8a5f16626f5d7143e49413c75eebff93 384 SUPERFAMILY SSF53067 95 194 1.42E-8 T 14-10-2018 XF_1524 8a5f16626f5d7143e49413c75eebff93 384 Pfam PF05137 Fimbrial assembly protein (PilN) 296 367 4.6E-12 T 14-10-2018 IPR007813 Fimbrial assembly PilN XF_1524 8a5f16626f5d7143e49413c75eebff93 384 Gene3D G3DSA:3.30.1490.300 114 172 4.3E-6 T 14-10-2018 XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 2.0E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 778 822 1.2E-15 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 827 873 1.1E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 2.4E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 584 9.6E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 3.3E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 875 23.995 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 Gene3D G3DSA:3.90.199.10 33 520 3.1E-223 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 873 0.0 T 14-10-2018 XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 SUPERFAMILY SSF101904 532 881 3.66E-103 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 SMART SM00434 11 498 3.1E-275 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 Gene3D G3DSA:1.10.268.10 369 492 3.1E-223 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 SUPERFAMILY SSF56719 30 520 2.62E-178 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 Gene3D G3DSA:3.30.1360.40 236 332 3.1E-223 T 14-10-2018 XF_2552 9e6edcdd664fbd8f36c6e66a9016961e 893 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 8.6E-154 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XF_0914 e4634d87c8892fb773cb55e30e28f3e8 141 Pfam PF01381 Helix-turn-helix 28 81 2.4E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_0914 e4634d87c8892fb773cb55e30e28f3e8 141 Gene3D G3DSA:1.10.260.40 21 90 3.9E-12 T 14-10-2018 XF_0914 e4634d87c8892fb773cb55e30e28f3e8 141 SMART SM00530 27 86 4.5E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_0914 e4634d87c8892fb773cb55e30e28f3e8 141 SUPERFAMILY SSF47413 22 77 2.38E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_0994 8bd386e7f4128fad1f8345d3a26a048c 146 Pfam PF02657 Fe-S metabolism associated domain 21 139 1.7E-42 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like XF_0994 8bd386e7f4128fad1f8345d3a26a048c 146 SUPERFAMILY SSF82649 15 144 6.8E-42 T 14-10-2018 XF_0994 8bd386e7f4128fad1f8345d3a26a048c 146 Gene3D G3DSA:3.90.1010.10 11 146 6.2E-47 T 14-10-2018 XF_1087 bd16ae65fc17f8c5967d00d90e1648aa 652 Gene3D G3DSA:3.30.870.10 473 560 3.1E-10 T 14-10-2018 XF_1087 bd16ae65fc17f8c5967d00d90e1648aa 652 Gene3D G3DSA:3.30.870.10 304 414 1.6E-7 T 14-10-2018 XF_1087 bd16ae65fc17f8c5967d00d90e1648aa 652 SMART SM00155 186 213 0.018 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XF_1087 bd16ae65fc17f8c5967d00d90e1648aa 652 SMART SM00155 497 524 0.37 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XF_1087 bd16ae65fc17f8c5967d00d90e1648aa 652 Pfam PF13091 PLD-like domain 90 245 3.0E-17 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XF_1087 bd16ae65fc17f8c5967d00d90e1648aa 652 Pfam PF13091 PLD-like domain 336 548 4.9E-12 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XF_1087 bd16ae65fc17f8c5967d00d90e1648aa 652 Gene3D G3DSA:3.30.870.10 74 258 3.2E-38 T 14-10-2018 XF_1087 bd16ae65fc17f8c5967d00d90e1648aa 652 SUPERFAMILY SSF56024 44 258 1.08E-37 T 14-10-2018 XF_1087 bd16ae65fc17f8c5967d00d90e1648aa 652 SUPERFAMILY SSF56024 313 565 5.1E-26 T 14-10-2018 XF_0837 57267c913020051b404158bae3c131c6 792 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 7 750 19.112 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 XF_0837 57267c913020051b404158bae3c131c6 792 Pfam PF04453 Organic solvent tolerance protein 296 689 3.4E-93 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 XF_1729 d5ec8831f22badef38bffa9e8596757d 291 PRINTS PR00069 Aldo-keto reductase signature 119 137 1.5E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 XF_1729 d5ec8831f22badef38bffa9e8596757d 291 PRINTS PR00069 Aldo-keto reductase signature 150 167 1.5E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 XF_1729 d5ec8831f22badef38bffa9e8596757d 291 PRINTS PR00069 Aldo-keto reductase signature 221 245 1.5E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 XF_1729 d5ec8831f22badef38bffa9e8596757d 291 SUPERFAMILY SSF51430 14 287 7.2E-73 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XF_1729 d5ec8831f22badef38bffa9e8596757d 291 Gene3D G3DSA:3.20.20.100 14 291 3.0E-80 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XF_1729 d5ec8831f22badef38bffa9e8596757d 291 Pfam PF00248 Aldo/keto reductase family 21 287 1.3E-60 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain XF_1243 acebdee76a707dcca99ea6d71fde2d3e 414 Gene3D G3DSA:3.10.310.10 27 403 4.7E-141 T 14-10-2018 XF_1243 acebdee76a707dcca99ea6d71fde2d3e 414 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 20 409 7.0E-230 T 14-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 XF_1243 acebdee76a707dcca99ea6d71fde2d3e 414 SUPERFAMILY SSF54506 20 198 9.42E-67 T 14-10-2018 XF_1243 acebdee76a707dcca99ea6d71fde2d3e 414 Gene3D G3DSA:3.10.310.10 197 389 4.7E-141 T 14-10-2018 XF_1243 acebdee76a707dcca99ea6d71fde2d3e 414 SUPERFAMILY SSF54506 205 407 2.2E-70 T 14-10-2018 XF_1243 acebdee76a707dcca99ea6d71fde2d3e 414 Pfam PF04303 PrpF protein 22 406 4.4E-184 T 14-10-2018 IPR007400 PrpF protein XF_1797 0f57a2a4493a20fc0c6cff2fd6605bba 389 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 19 379 2.6E-46 T 14-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 XF_1797 0f57a2a4493a20fc0c6cff2fd6605bba 389 Pfam PF07219 HemY protein N-terminus 33 132 1.6E-15 T 14-10-2018 IPR010817 HemY, N-terminal XF_1797 0f57a2a4493a20fc0c6cff2fd6605bba 389 SUPERFAMILY SSF48452 130 383 1.67E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_1915 b2e74bc0657572f6e560d3aee34d2793 208 PRINTS PR00096 Glutamine amidotransferase superfamily signature 51 60 3.4E-11 T 14-10-2018 XF_1915 b2e74bc0657572f6e560d3aee34d2793 208 PRINTS PR00096 Glutamine amidotransferase superfamily signature 171 184 3.4E-11 T 14-10-2018 XF_1915 b2e74bc0657572f6e560d3aee34d2793 208 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 3.4E-11 T 14-10-2018 XF_1915 b2e74bc0657572f6e560d3aee34d2793 208 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 5 193 1.6E-53 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_1915 b2e74bc0657572f6e560d3aee34d2793 208 Pfam PF00117 Glutamine amidotransferase class-I 7 192 2.1E-36 T 14-10-2018 IPR017926 Glutamine amidotransferase XF_1915 b2e74bc0657572f6e560d3aee34d2793 208 PRINTS PR00097 Anthranilate synthase component II signature 5 19 5.8E-26 T 14-10-2018 XF_1915 b2e74bc0657572f6e560d3aee34d2793 208 PRINTS PR00097 Anthranilate synthase component II signature 51 60 5.8E-26 T 14-10-2018 XF_1915 b2e74bc0657572f6e560d3aee34d2793 208 PRINTS PR00097 Anthranilate synthase component II signature 79 90 5.8E-26 T 14-10-2018 XF_1915 b2e74bc0657572f6e560d3aee34d2793 208 PRINTS PR00097 Anthranilate synthase component II signature 125 137 5.8E-26 T 14-10-2018 XF_1915 b2e74bc0657572f6e560d3aee34d2793 208 PRINTS PR00097 Anthranilate synthase component II signature 171 184 5.8E-26 T 14-10-2018 XF_1915 b2e74bc0657572f6e560d3aee34d2793 208 PRINTS PR00097 Anthranilate synthase component II signature 104 112 5.8E-26 T 14-10-2018 XF_1915 b2e74bc0657572f6e560d3aee34d2793 208 Gene3D G3DSA:3.40.50.880 3 202 1.7E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_1915 b2e74bc0657572f6e560d3aee34d2793 208 SUPERFAMILY SSF52317 4 192 2.71E-41 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_1204 05928c7b83f022af04cbbbcbf529fe9c 185 Pfam PF07209 Protein of unknown function (DUF1415) 11 176 1.3E-67 T 14-10-2018 IPR009858 Protein of unknown function DUF1415 XF_2011 8b6226c33c5941a8ba10303da9eb42a6 73 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 9 73 2.4E-32 T 14-10-2018 IPR012662 Conserved hypothetical protein CHP02449 XF_2015 9644a155bcc1ac53b5b3f86fad6e82ba 245 SUPERFAMILY SSF100950 31 174 1.84E-43 T 14-10-2018 IPR037171 NagB/RpiA transferase-like XF_2015 9644a155bcc1ac53b5b3f86fad6e82ba 245 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 31 245 32.255 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 XF_2015 9644a155bcc1ac53b5b3f86fad6e82ba 245 Gene3D G3DSA:3.40.50.1360 35 236 2.4E-75 T 14-10-2018 XF_2015 9644a155bcc1ac53b5b3f86fad6e82ba 245 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 35 240 5.8E-66 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 XF_2015 9644a155bcc1ac53b5b3f86fad6e82ba 245 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 77 240 2.6E-56 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 XF_2015 9644a155bcc1ac53b5b3f86fad6e82ba 245 Gene3D G3DSA:3.30.70.260 153 225 2.4E-75 T 14-10-2018 XF_2015 9644a155bcc1ac53b5b3f86fad6e82ba 245 SUPERFAMILY SSF75445 155 227 3.27E-22 T 14-10-2018 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 Gene3D G3DSA:1.10.1440.20 600 660 1.2E-21 T 14-10-2018 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 ProSitePatterns PS00450 Aconitase family signature 1. 435 451 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 Pfam PF00694 Aconitase C-terminal domain 700 830 1.3E-43 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 277 290 7.6E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 168 176 7.6E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 291 304 7.6E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 144 157 7.6E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 439 450 7.6E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 215 230 7.6E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 371 385 7.6E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 201 214 7.6E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 501 514 7.6E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 Gene3D G3DSA:3.20.19.10 661 903 3.7E-100 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 17 902 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 Pfam PF00330 Aconitase family (aconitate hydratase) 67 570 6.4E-178 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 SUPERFAMILY SSF52016 639 901 4.91E-85 T 14-10-2018 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 ProSitePatterns PS01244 Aconitase family signature 2. 501 514 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 Gene3D G3DSA:3.30.499.10 372 598 8.3E-99 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 SUPERFAMILY SSF53732 3 633 2.22E-222 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 XF_0290 e7c3c96ffbecccce8e510feeb1bc215c 908 Gene3D G3DSA:3.30.499.20 4 371 3.7E-158 T 14-10-2018 XF_0257 8329a2e48914cfcad57b20a85ae36112 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 176 1.0E-99 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 XF_0257 8329a2e48914cfcad57b20a85ae36112 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 173 8.7E-69 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 XF_0257 8329a2e48914cfcad57b20a85ae36112 185 SUPERFAMILY SSF51182 2 175 9.58E-71 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily XF_0257 8329a2e48914cfcad57b20a85ae36112 185 Gene3D G3DSA:2.60.120.10 1 184 2.8E-67 T 14-10-2018 IPR014710 RmlC-like jelly roll fold XF_0257 8329a2e48914cfcad57b20a85ae36112 185 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 175 8.6E-86 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 XF_1447 5fdf72b9d71e54fa81ad954b916df835 375 SUPERFAMILY SSF55729 177 352 2.01E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase XF_1447 5fdf72b9d71e54fa81ad954b916df835 375 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 9 374 7.1E-134 T 14-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition XF_2185 891ba5f64461b706bc28eaecd8a53bcb 415 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 18 219 24.231 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 XF_2185 891ba5f64461b706bc28eaecd8a53bcb 415 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 129 238 1.2E-43 T 14-10-2018 IPR012997 Rare lipoprotein A XF_2185 891ba5f64461b706bc28eaecd8a53bcb 415 Pfam PF03330 Lytic transglycolase 128 216 3.3E-23 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain XF_2185 891ba5f64461b706bc28eaecd8a53bcb 415 Gene3D G3DSA:2.40.40.10 126 220 5.4E-35 T 14-10-2018 IPR036908 RlpA-like domain superfamily XF_2185 891ba5f64461b706bc28eaecd8a53bcb 415 SUPERFAMILY SSF110997 342 408 6.8E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XF_2185 891ba5f64461b706bc28eaecd8a53bcb 415 SUPERFAMILY SSF50685 127 217 2.79E-9 T 14-10-2018 IPR036908 RlpA-like domain superfamily XF_2185 891ba5f64461b706bc28eaecd8a53bcb 415 Pfam PF05036 Sporulation related domain 343 403 1.1E-7 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 XF_0897 1a362de5f1f1c5c506fb2f79acb3db6f 275 Pfam PF13332 Haemagluttinin repeat 186 248 1.4E-4 T 14-10-2018 IPR025157 Hemagglutinin repeat XF_1975 eb37d6656cd224e21ab687380917bf01 574 Gene3D G3DSA:3.40.140.20 439 574 6.0E-59 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XF_1975 eb37d6656cd224e21ab687380917bf01 574 Gene3D G3DSA:3.40.50.1380 48 249 2.2E-78 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XF_1975 eb37d6656cd224e21ab687380917bf01 574 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 55 574 43.877 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XF_1975 eb37d6656cd224e21ab687380917bf01 574 SUPERFAMILY SSF53927 267 574 4.41E-126 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XF_1975 eb37d6656cd224e21ab687380917bf01 574 SMART SM00798 185 506 1.3E-194 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XF_1975 eb37d6656cd224e21ab687380917bf01 574 Gene3D G3DSA:3.40.140.20 265 420 2.6E-56 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XF_1975 eb37d6656cd224e21ab687380917bf01 574 Pfam PF02142 MGS-like domain 67 179 1.9E-23 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain XF_1975 eb37d6656cd224e21ab687380917bf01 574 SUPERFAMILY SSF52335 55 245 3.01E-64 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XF_1975 eb37d6656cd224e21ab687380917bf01 574 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 57 574 4.7E-218 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XF_1975 eb37d6656cd224e21ab687380917bf01 574 Pfam PF01808 AICARFT/IMPCHase bienzyme 185 505 1.5E-114 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XF_1975 eb37d6656cd224e21ab687380917bf01 574 PIRSF PIRSF000414 50 574 5.8E-212 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XF_1975 eb37d6656cd224e21ab687380917bf01 574 SMART SM00851 67 180 6.2E-49 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain XF_0006 a9b998bad7b0b298458bce1576442771 306 Pfam PF01435 Peptidase family M48 96 281 8.1E-35 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 XF_0006 a9b998bad7b0b298458bce1576442771 306 Gene3D G3DSA:3.30.2010.10 94 175 1.6E-5 T 14-10-2018 XF_2663 3d904a6fea52a430c3c821b21363a5b8 361 SUPERFAMILY SSF52540 4 274 1.06E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2663 3d904a6fea52a430c3c821b21363a5b8 361 Gene3D G3DSA:3.40.50.300 106 295 2.8E-14 T 14-10-2018 XF_2663 3d904a6fea52a430c3c821b21363a5b8 361 Pfam PF13538 UvrD-like helicase C-terminal domain 217 269 3.7E-12 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain XF_0526 171d327bb8c2c09a7fc9e4cda3c03ca1 941 Gene3D G3DSA:3.40.50.410 153 336 2.0E-13 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily XF_0526 171d327bb8c2c09a7fc9e4cda3c03ca1 941 SUPERFAMILY SSF53300 153 304 4.3E-13 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily XF_0526 171d327bb8c2c09a7fc9e4cda3c03ca1 941 Pfam PF13550 Putative phage tail protein 401 551 5.8E-9 T 14-10-2018 IPR032876 Tip attachment protein J XF_1895 3d44a9c51980b91c4515d605c14e9561 271 SUPERFAMILY SSF48452 145 259 9.7E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_1895 3d44a9c51980b91c4515d605c14e9561 271 Pfam PF16331 TolA binding protein trimerisation 27 98 3.4E-20 T 14-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 XF_1895 3d44a9c51980b91c4515d605c14e9561 271 Pfam PF13525 Outer membrane lipoprotein 144 265 2.2E-11 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like XF_1895 3d44a9c51980b91c4515d605c14e9561 271 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 261 2.1E-38 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal XF_1895 3d44a9c51980b91c4515d605c14e9561 271 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 1 264 18.705 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 XF_1895 3d44a9c51980b91c4515d605c14e9561 271 Gene3D G3DSA:1.25.40.10 145 271 6.1E-33 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_0138 733f56aa2196a69d11361e990add5b5a 491 SUPERFAMILY SSF52949 3 181 1.12E-41 T 14-10-2018 XF_0138 733f56aa2196a69d11361e990add5b5a 491 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 344 351 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XF_0138 733f56aa2196a69d11361e990add5b5a 491 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 5 490 34.959 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 XF_0138 733f56aa2196a69d11361e990add5b5a 491 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 21 144 2.3E-31 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XF_0138 733f56aa2196a69d11361e990add5b5a 491 Gene3D G3DSA:3.40.630.10 176 491 2.7E-139 T 14-10-2018 XF_0138 733f56aa2196a69d11361e990add5b5a 491 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 183 483 1.1E-118 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XF_0138 733f56aa2196a69d11361e990add5b5a 491 SUPERFAMILY SSF53187 176 489 6.59E-120 T 14-10-2018 XF_0138 733f56aa2196a69d11361e990add5b5a 491 Gene3D G3DSA:3.40.220.10 3 162 1.6E-44 T 14-10-2018 XF_0138 733f56aa2196a69d11361e990add5b5a 491 PRINTS PR00481 Cytosol aminopeptidase signature 259 276 3.0E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XF_0138 733f56aa2196a69d11361e990add5b5a 491 PRINTS PR00481 Cytosol aminopeptidase signature 368 383 3.0E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XF_0138 733f56aa2196a69d11361e990add5b5a 491 PRINTS PR00481 Cytosol aminopeptidase signature 318 339 3.0E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XF_0138 733f56aa2196a69d11361e990add5b5a 491 PRINTS PR00481 Cytosol aminopeptidase signature 340 360 3.0E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XF_0138 733f56aa2196a69d11361e990add5b5a 491 PRINTS PR00481 Cytosol aminopeptidase signature 281 302 3.0E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XF_a0026 177872055497571df561a1cc9a89c5dc 90 Pfam PF13828 Domain of unknown function (DUF4190) 11 74 8.1E-20 T 14-10-2018 IPR025241 Domain of unknown function DUF4190 XF_0436 fda97c3b124c05a17b845ebf656d9631 120 Gene3D G3DSA:3.30.1130.10 1 117 5.7E-38 T 14-10-2018 XF_0436 fda97c3b124c05a17b845ebf656d9631 120 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 9.4E-23 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XF_0436 fda97c3b124c05a17b845ebf656d9631 120 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 4.9E-31 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XF_0436 fda97c3b124c05a17b845ebf656d9631 120 SMART SM00905 4 114 9.8E-44 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XF_0436 fda97c3b124c05a17b845ebf656d9631 120 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.3E-27 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XF_0436 fda97c3b124c05a17b845ebf656d9631 120 SUPERFAMILY SSF55620 1 116 1.78E-34 T 14-10-2018 XF_1890 3319445918f50efe2b050f5133dcbffd 190 ProSitePatterns PS00460 Glutathione peroxidases active site. 46 61 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 XF_1890 3319445918f50efe2b050f5133dcbffd 190 PIRSF PIRSF000303 2 184 7.1E-64 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XF_1890 3319445918f50efe2b050f5133dcbffd 190 PRINTS PR01011 Glutathione peroxidase family signature 79 95 1.2E-18 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XF_1890 3319445918f50efe2b050f5133dcbffd 190 PRINTS PR01011 Glutathione peroxidase family signature 145 154 1.2E-18 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XF_1890 3319445918f50efe2b050f5133dcbffd 190 PRINTS PR01011 Glutathione peroxidase family signature 44 61 1.2E-18 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XF_1890 3319445918f50efe2b050f5133dcbffd 190 Pfam PF00255 Glutathione peroxidase 26 133 1.3E-38 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XF_1890 3319445918f50efe2b050f5133dcbffd 190 Gene3D G3DSA:3.40.30.10 19 184 5.8E-63 T 14-10-2018 XF_1890 3319445918f50efe2b050f5133dcbffd 190 SUPERFAMILY SSF52833 25 181 2.39E-59 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_2527 1e208a12bf3bdc407dd33c77724c2903 131 Gene3D G3DSA:3.90.20.10 4 120 1.2E-8 T 14-10-2018 XF_1992 056ac7e611b0f2126595ad30d461efde 398 PIRSF PIRSF001259 1 375 9.6E-106 T 14-10-2018 XF_1992 056ac7e611b0f2126595ad30d461efde 398 SUPERFAMILY SSF142695 186 342 3.27E-46 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XF_1992 056ac7e611b0f2126595ad30d461efde 398 Gene3D G3DSA:3.40.50.10990 173 344 4.5E-55 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XF_1992 056ac7e611b0f2126595ad30d461efde 398 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 171 367 39.31 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XF_1992 056ac7e611b0f2126595ad30d461efde 398 Pfam PF00925 GTP cyclohydrolase II 178 341 3.6E-49 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XF_1921 56e8cf1f320f1ca1d93e166634204925 242 Gene3D G3DSA:1.10.287.990 51 117 5.0E-23 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_1921 56e8cf1f320f1ca1d93e166634204925 242 SUPERFAMILY SSF54719 121 235 1.05E-42 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_1921 56e8cf1f320f1ca1d93e166634204925 242 Gene3D G3DSA:2.40.500.20 123 242 1.3E-45 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_1921 56e8cf1f320f1ca1d93e166634204925 242 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 125 228 1.2E-38 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_1921 56e8cf1f320f1ca1d93e166634204925 242 SUPERFAMILY SSF46609 25 118 1.01E-32 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_1921 56e8cf1f320f1ca1d93e166634204925 242 PRINTS PR01703 Manganese superoxide dismutase signature 37 48 7.0E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_1921 56e8cf1f320f1ca1d93e166634204925 242 PRINTS PR01703 Manganese superoxide dismutase signature 154 162 7.0E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_1921 56e8cf1f320f1ca1d93e166634204925 242 PRINTS PR01703 Manganese superoxide dismutase signature 58 71 7.0E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_1921 56e8cf1f320f1ca1d93e166634204925 242 PRINTS PR01703 Manganese superoxide dismutase signature 100 113 7.0E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_1921 56e8cf1f320f1ca1d93e166634204925 242 PRINTS PR01703 Manganese superoxide dismutase signature 194 206 7.0E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_1921 56e8cf1f320f1ca1d93e166634204925 242 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 34 117 1.4E-27 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_1921 56e8cf1f320f1ca1d93e166634204925 242 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 196 203 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_1921 56e8cf1f320f1ca1d93e166634204925 242 PIRSF PIRSF000349 9 239 1.7E-78 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XF_1326 6779351613710546fc6d34f4ac839e16 216 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 42 186 1.0E-16 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XF_1326 6779351613710546fc6d34f4ac839e16 216 Gene3D G3DSA:1.10.340.30 33 147 4.0E-55 T 14-10-2018 XF_1326 6779351613710546fc6d34f4ac839e16 216 Gene3D G3DSA:1.10.1670.40 6 197 4.0E-55 T 14-10-2018 XF_1326 6779351613710546fc6d34f4ac839e16 216 SMART SM00478 45 200 5.0E-10 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XF_1326 6779351613710546fc6d34f4ac839e16 216 SUPERFAMILY SSF48150 30 198 2.27E-36 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 XF_0751 00f8205e7b7de839c996dbb2f98d1c51 362 Pfam PF00570 HRDC domain 214 256 1.5E-4 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 XF_0751 00f8205e7b7de839c996dbb2f98d1c51 362 Gene3D G3DSA:1.10.150.80 295 361 3.6E-5 T 14-10-2018 XF_0751 00f8205e7b7de839c996dbb2f98d1c51 362 Pfam PF01612 3'-5' exonuclease 3 167 4.6E-27 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XF_0751 00f8205e7b7de839c996dbb2f98d1c51 362 SUPERFAMILY SSF47819 195 282 2.83E-13 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 XF_0751 00f8205e7b7de839c996dbb2f98d1c51 362 TIGRFAM TIGR01388 rnd: ribonuclease D 4 358 5.4E-148 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 XF_0751 00f8205e7b7de839c996dbb2f98d1c51 362 SUPERFAMILY SSF53098 2 188 4.99E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily XF_0751 00f8205e7b7de839c996dbb2f98d1c51 362 SUPERFAMILY SSF47819 294 358 4.58E-11 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 XF_0751 00f8205e7b7de839c996dbb2f98d1c51 362 Gene3D G3DSA:3.30.420.10 3 190 4.0E-54 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XF_0751 00f8205e7b7de839c996dbb2f98d1c51 362 SMART SM00474 2 168 2.6E-30 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XF_0751 00f8205e7b7de839c996dbb2f98d1c51 362 Gene3D G3DSA:1.10.150.80 192 293 3.2E-6 T 14-10-2018 XF_0685 0fd084ec35fa459b99fb1b2eeb725d79 188 Pfam PF10991 Protein of unknown function (DUF2815) 2 173 9.6E-48 T 14-10-2018 IPR022595 Protein of unknown function DUF2815 XF_0685 0fd084ec35fa459b99fb1b2eeb725d79 188 SUPERFAMILY SSF50249 6 169 6.34E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_0685 0fd084ec35fa459b99fb1b2eeb725d79 188 Gene3D G3DSA:2.40.50.140 1 172 1.8E-48 T 14-10-2018 XF_0205 19257b7e5a11c15afdf132efc285007b 308 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 304 26.767 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XF_0205 19257b7e5a11c15afdf132efc285007b 308 ProSitePatterns PS01058 SAICAR synthetase signature 2. 216 224 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XF_0205 19257b7e5a11c15afdf132efc285007b 308 SUPERFAMILY SSF56104 5 305 2.84E-96 T 14-10-2018 XF_0205 19257b7e5a11c15afdf132efc285007b 308 Gene3D G3DSA:3.30.470.20 117 260 1.9E-58 T 14-10-2018 XF_0205 19257b7e5a11c15afdf132efc285007b 308 Pfam PF01259 SAICAR synthetase 18 279 1.1E-96 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XF_0205 19257b7e5a11c15afdf132efc285007b 308 ProSitePatterns PS01057 SAICAR synthetase signature 1. 117 131 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XF_0205 19257b7e5a11c15afdf132efc285007b 308 Gene3D G3DSA:3.30.200.20 3 115 8.0E-28 T 14-10-2018 XF_0205 19257b7e5a11c15afdf132efc285007b 308 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 19 303 2.4E-74 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 PRINTS PR00149 Fumarate lyase superfamily signature 181 199 3.7E-32 T 14-10-2018 IPR000362 Fumarate lyase family XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 3.7E-32 T 14-10-2018 IPR000362 Fumarate lyase family XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 3.7E-32 T 14-10-2018 IPR000362 Fumarate lyase family XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 3.7E-32 T 14-10-2018 IPR000362 Fumarate lyase family XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 Gene3D G3DSA:1.10.40.30 409 460 2.2E-17 T 14-10-2018 XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 Pfam PF00206 Lyase 20 343 8.1E-95 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 Gene3D G3DSA:1.20.200.10 140 406 9.3E-100 T 14-10-2018 XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 Hamap MF_00743 Fumarate hydratase class II [fumC]. 11 463 81.297 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 PRINTS PR00145 Argininosuccinate lyase family signature 176 196 1.3E-6 T 14-10-2018 XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 PRINTS PR00145 Argininosuccinate lyase family signature 134 156 1.3E-6 T 14-10-2018 XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 PRINTS PR00145 Argininosuccinate lyase family signature 318 334 1.3E-6 T 14-10-2018 XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 Gene3D G3DSA:1.10.275.10 12 139 4.0E-50 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 SUPERFAMILY SSF48557 11 460 2.51E-140 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 XF_1554 69bb0d6d4db6c1aa92e015dac048d9c1 473 Pfam PF10415 Fumarase C C-terminus 409 461 2.8E-17 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 297 326 0.092 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 462 493 580.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 396 425 2.5E-4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 869 898 0.43 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 360 392 610.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 902 939 150.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 705 734 0.026 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 192 221 350.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 229 258 1100.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 429 458 0.46 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 987 1016 0.082 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 836 865 14.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 330 359 1.4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 672 701 320.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 803 832 0.0075 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SMART SM00248 261 293 12.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SUPERFAMILY SSF48403 648 1040 1.11E-57 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 SUPERFAMILY SSF48403 197 474 2.09E-51 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 Gene3D G3DSA:1.25.40.20 189 359 5.6E-31 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 Gene3D G3DSA:1.25.40.20 640 771 1.4E-23 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 Gene3D G3DSA:1.25.40.20 360 639 1.1E-35 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 Gene3D G3DSA:1.25.40.20 915 1049 2.2E-14 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 Gene3D G3DSA:1.25.40.20 772 914 6.8E-34 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 Pfam PF12796 Ankyrin repeats (3 copies) 378 455 5.4E-10 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 Pfam PF12796 Ankyrin repeats (3 copies) 278 357 1.3E-9 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 Pfam PF12796 Ankyrin repeats (3 copies) 654 735 2.5E-7 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain XF_1640 fdeacf34e6af66ab90e1e5152a7fdef5 1058 Pfam PF12796 Ankyrin repeats (3 copies) 778 861 6.0E-11 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain XF_2046 fb3f39ea2f92e79aab29616db270aa99 464 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 28 328 4.1E-107 T 14-10-2018 IPR014150 Conjugal transfer, TrbL XF_2046 fb3f39ea2f92e79aab29616db270aa99 464 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 64 271 9.5E-30 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 XF_a0037 fb3f39ea2f92e79aab29616db270aa99 464 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 28 328 4.1E-107 T 14-10-2018 IPR014150 Conjugal transfer, TrbL XF_a0037 fb3f39ea2f92e79aab29616db270aa99 464 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 64 271 9.5E-30 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 XF_1497 53dbb4b601d7764270b5af08eeb469ed 237 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 40 212 8.0E-53 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 XF_1497 53dbb4b601d7764270b5af08eeb469ed 237 SUPERFAMILY SSF52402 13 200 8.7E-58 T 14-10-2018 XF_1497 53dbb4b601d7764270b5af08eeb469ed 237 Gene3D G3DSA:3.40.50.620 9 237 7.0E-67 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_1497 53dbb4b601d7764270b5af08eeb469ed 237 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 1 235 39.788 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 XF_1497 53dbb4b601d7764270b5af08eeb469ed 237 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 25 235 1.2E-80 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 XF_1497 53dbb4b601d7764270b5af08eeb469ed 237 PIRSF PIRSF000857 8 237 4.1E-59 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 XF_1497 53dbb4b601d7764270b5af08eeb469ed 237 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 13 234 2.0E-83 T 14-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 XF_1632 892871cae9a9aa1ce7f2aa92add0f3fa 376 Gene3D G3DSA:3.40.50.300 105 359 3.3E-86 T 14-10-2018 XF_1632 892871cae9a9aa1ce7f2aa92add0f3fa 376 Gene3D G3DSA:3.30.450.90 2 102 1.7E-31 T 14-10-2018 XF_1632 892871cae9a9aa1ce7f2aa92add0f3fa 376 Pfam PF00437 Type II/IV secretion system protein 38 271 7.3E-35 T 14-10-2018 IPR001482 Type II/IV secretion system protein XF_1632 892871cae9a9aa1ce7f2aa92add0f3fa 376 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 347 1.8E-133 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 XF_1632 892871cae9a9aa1ce7f2aa92add0f3fa 376 SUPERFAMILY SSF52540 8 341 7.72E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0610 f7fbd4fdfb20d064113760d21a6a615e 295 Gene3D G3DSA:3.90.25.10 168 287 2.0E-83 T 14-10-2018 XF_0610 f7fbd4fdfb20d064113760d21a6a615e 295 Pfam PF16363 GDP-mannose 4,6 dehydratase 2 276 6.6E-41 T 14-10-2018 IPR016040 NAD(P)-binding domain XF_0610 f7fbd4fdfb20d064113760d21a6a615e 295 SUPERFAMILY SSF51735 2 292 3.13E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0610 f7fbd4fdfb20d064113760d21a6a615e 295 Gene3D G3DSA:3.40.50.720 2 280 2.0E-83 T 14-10-2018 XF_2470 8c53edfbec652813f0b425300381aea4 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 63 188 1.7E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XF_2470 8c53edfbec652813f0b425300381aea4 229 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 15 220 9.2E-94 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 XF_2470 8c53edfbec652813f0b425300381aea4 229 Gene3D G3DSA:3.40.50.1000 15 213 3.0E-52 T 14-10-2018 IPR023214 HAD superfamily XF_2470 8c53edfbec652813f0b425300381aea4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 154 8.1E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XF_2470 8c53edfbec652813f0b425300381aea4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 107 120 8.1E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XF_2470 8c53edfbec652813f0b425300381aea4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 12 23 8.1E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XF_2470 8c53edfbec652813f0b425300381aea4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 156 176 8.1E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XF_2470 8c53edfbec652813f0b425300381aea4 229 SUPERFAMILY SSF56784 13 220 2.36E-52 T 14-10-2018 IPR036412 HAD-like superfamily XF_2470 8c53edfbec652813f0b425300381aea4 229 Gene3D G3DSA:1.10.150.240 27 93 3.0E-52 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XF_2470 8c53edfbec652813f0b425300381aea4 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 192 4.9E-31 T 14-10-2018 XF_2470 8c53edfbec652813f0b425300381aea4 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 192 2.5E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XF_2470 8c53edfbec652813f0b425300381aea4 229 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 12 221 30.984 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 XF_1058 2709e5b3e7382b64993fe67874ea24d0 247 Hamap MF_01220_B Uridylate kinase [pyrH]. 8 241 44.538 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 XF_1058 2709e5b3e7382b64993fe67874ea24d0 247 Gene3D G3DSA:3.40.1160.10 4 246 5.6E-77 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XF_1058 2709e5b3e7382b64993fe67874ea24d0 247 SUPERFAMILY SSF53633 9 240 8.64E-71 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XF_1058 2709e5b3e7382b64993fe67874ea24d0 247 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 10 241 6.2E-98 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 XF_1058 2709e5b3e7382b64993fe67874ea24d0 247 PIRSF PIRSF005650 5 247 4.1E-93 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 XF_1058 2709e5b3e7382b64993fe67874ea24d0 247 Pfam PF00696 Amino acid kinase family 12 220 1.6E-27 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XF_1372 0d0bc2cbee0d81d8b858097796c313b8 638 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 269 342 6.2E-20 T 14-10-2018 IPR020012 Motility protein FimV, N-terminal XF_1372 0d0bc2cbee0d81d8b858097796c313b8 638 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 595 637 5.8E-15 T 14-10-2018 IPR020011 Motility protein FimV, C-terminal XF_1372 0d0bc2cbee0d81d8b858097796c313b8 638 Gene3D G3DSA:1.20.58.2200 589 637 2.2E-12 T 14-10-2018 IPR038440 FimV, C-terminal domain superfamily XF_2255 20f7b5e29dd8b780a3f9ea8c408b4f17 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 644 51.545 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 XF_2255 20f7b5e29dd8b780a3f9ea8c408b4f17 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 530 608 6.1E-25 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XF_2255 20f7b5e29dd8b780a3f9ea8c408b4f17 647 Gene3D G3DSA:3.30.300.30 517 646 2.1E-31 T 14-10-2018 XF_2255 20f7b5e29dd8b780a3f9ea8c408b4f17 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 22 79 2.4E-20 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 XF_2255 20f7b5e29dd8b780a3f9ea8c408b4f17 647 Gene3D G3DSA:3.40.50.12780 48 514 7.6E-100 T 14-10-2018 XF_2255 20f7b5e29dd8b780a3f9ea8c408b4f17 647 SUPERFAMILY SSF56801 9 641 2.35E-181 T 14-10-2018 XF_2255 20f7b5e29dd8b780a3f9ea8c408b4f17 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 641 5.2E-298 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 XF_2255 20f7b5e29dd8b780a3f9ea8c408b4f17 647 Pfam PF00501 AMP-binding enzyme 85 521 2.2E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XF_2255 20f7b5e29dd8b780a3f9ea8c408b4f17 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 14-10-2018 IPR020845 AMP-binding, conserved site XF_1097 33efc72ea3063105f6d87fbbbe0be8ff 394 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 4 389 5.4E-136 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XF_1097 33efc72ea3063105f6d87fbbbe0be8ff 394 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 165 391 1.7E-79 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 XF_1097 33efc72ea3063105f6d87fbbbe0be8ff 394 Gene3D G3DSA:3.20.140.10 1 394 4.7E-148 T 14-10-2018 XF_1097 33efc72ea3063105f6d87fbbbe0be8ff 394 PIRSF PIRSF000484 1 378 4.0E-67 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 XF_1097 33efc72ea3063105f6d87fbbbe0be8ff 394 SUPERFAMILY SSF54675 2 137 1.27E-43 T 14-10-2018 XF_1097 33efc72ea3063105f6d87fbbbe0be8ff 394 SUPERFAMILY SSF51690 120 390 1.82E-85 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XF_1097 33efc72ea3063105f6d87fbbbe0be8ff 394 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 392 50.506 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XF_2115 41654f870b828980b6e4af7b56ad7a12 941 Pfam PF13550 Putative phage tail protein 401 551 5.8E-9 T 14-10-2018 IPR032876 Tip attachment protein J XF_2115 41654f870b828980b6e4af7b56ad7a12 941 Gene3D G3DSA:3.40.50.410 153 336 8.6E-13 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily XF_2115 41654f870b828980b6e4af7b56ad7a12 941 SUPERFAMILY SSF53300 153 304 9.05E-13 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily XF_0192 137da040da8ab015b2c1ab375fc956d0 446 Gene3D G3DSA:3.40.50.300 1 208 1.9E-76 T 14-10-2018 XF_0192 137da040da8ab015b2c1ab375fc956d0 446 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XF_0192 137da040da8ab015b2c1ab375fc956d0 446 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.7E-29 T 14-10-2018 IPR001650 Helicase, C-terminal XF_0192 137da040da8ab015b2c1ab375fc956d0 446 SUPERFAMILY SSF52540 74 360 1.25E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0192 137da040da8ab015b2c1ab375fc956d0 446 Pfam PF00270 DEAD/DEAH box helicase 25 196 2.1E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XF_0192 137da040da8ab015b2c1ab375fc956d0 446 SMART SM00490 259 340 2.4E-31 T 14-10-2018 IPR001650 Helicase, C-terminal XF_0192 137da040da8ab015b2c1ab375fc956d0 446 SMART SM00487 20 223 1.1E-58 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_0192 137da040da8ab015b2c1ab375fc956d0 446 Gene3D G3DSA:3.40.50.300 209 374 5.7E-48 T 14-10-2018 XF_0225 7aac9450955917e84a54558fd6197435 614 Pfam PF02355 Protein export membrane protein 435 600 1.9E-20 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial XF_0225 7aac9450955917e84a54558fd6197435 614 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 598 9.3E-121 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 XF_0225 7aac9450955917e84a54558fd6197435 614 Pfam PF07549 SecD/SecF GG Motif 115 140 6.9E-6 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site XF_0225 7aac9450955917e84a54558fd6197435 614 Gene3D G3DSA:3.30.1360.200 276 430 6.6E-41 T 14-10-2018 XF_0225 7aac9450955917e84a54558fd6197435 614 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 613 43.451 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 XF_0225 7aac9450955917e84a54558fd6197435 614 Gene3D G3DSA:1.20.1640.10 435 611 4.5E-15 T 14-10-2018 XF_0225 7aac9450955917e84a54558fd6197435 614 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 391 592 3.7E-62 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XF_0225 7aac9450955917e84a54558fd6197435 614 Gene3D G3DSA:3.30.70.3400 217 434 6.6E-41 T 14-10-2018 XF_0225 7aac9450955917e84a54558fd6197435 614 SUPERFAMILY SSF82866 407 606 6.93E-42 T 14-10-2018 XF_0225 7aac9450955917e84a54558fd6197435 614 Pfam PF13721 SecD export protein N-terminal TM region 3 102 4.6E-30 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain XF_0225 7aac9450955917e84a54558fd6197435 614 Gene3D G3DSA:3.30.70.260 26 105 1.2E-5 T 14-10-2018 XF_2223 e8ea19aa8621851b877c51f376cc1721 430 SUPERFAMILY SSF53686 1 428 1.05E-120 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XF_2223 e8ea19aa8621851b877c51f376cc1721 430 Gene3D G3DSA:3.40.50.1100 100 403 7.2E-121 T 14-10-2018 XF_2223 e8ea19aa8621851b877c51f376cc1721 430 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 94 377 5.9E-22 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XF_2223 e8ea19aa8621851b877c51f376cc1721 430 Gene3D G3DSA:3.40.50.1100 89 397 7.2E-121 T 14-10-2018 XF_2223 e8ea19aa8621851b877c51f376cc1721 430 Pfam PF14821 Threonine synthase N terminus 3 59 2.8E-10 T 14-10-2018 IPR029144 Threonine synthase, N-terminal XF_2223 e8ea19aa8621851b877c51f376cc1721 430 TIGRFAM TIGR00260 thrC: threonine synthase 80 396 9.5E-69 T 14-10-2018 IPR004450 Threonine synthase-like XF_2223 e8ea19aa8621851b877c51f376cc1721 430 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 94 108 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 XF_2223 e8ea19aa8621851b877c51f376cc1721 430 Gene3D G3DSA:3.90.1380.10 1 78 4.7E-12 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily XF_1723 3b1c36893c7a1234e3527528aed5074b 362 SUPERFAMILY SSF51430 36 351 3.67E-96 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XF_1723 3b1c36893c7a1234e3527528aed5074b 362 Gene3D G3DSA:3.20.20.100 35 357 4.0E-110 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XF_1723 3b1c36893c7a1234e3527528aed5074b 362 Pfam PF00248 Aldo/keto reductase family 48 349 2.3E-75 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain XF_0090 2737aac2a24bf23eb8ca55a999a8d259 317 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 312 28.968 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 XF_0090 2737aac2a24bf23eb8ca55a999a8d259 317 SUPERFAMILY SSF52540 10 154 4.47E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0090 2737aac2a24bf23eb8ca55a999a8d259 317 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 302 1.3E-91 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 XF_0090 2737aac2a24bf23eb8ca55a999a8d259 317 Gene3D G3DSA:1.10.20.140 116 188 2.2E-96 T 14-10-2018 XF_0090 2737aac2a24bf23eb8ca55a999a8d259 317 Pfam PF01715 IPP transferase 43 292 2.9E-80 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 XF_0090 2737aac2a24bf23eb8ca55a999a8d259 317 Gene3D G3DSA:3.40.50.300 13 299 2.2E-96 T 14-10-2018 XF_2213 81391d324b3175635c7dee8dafee4ef4 206 SUPERFAMILY SSF141734 12 113 1.02E-41 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 XF_2213 81391d324b3175635c7dee8dafee4ef4 206 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 1.0E-23 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 XF_2213 81391d324b3175635c7dee8dafee4ef4 206 Gene3D G3DSA:3.10.20.400 9 102 4.8E-33 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 XF_2213 81391d324b3175635c7dee8dafee4ef4 206 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 2.0E-29 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 XF_2213 81391d324b3175635c7dee8dafee4ef4 206 Gene3D G3DSA:1.10.287.1080 115 206 7.1E-25 T 14-10-2018 XF_2213 81391d324b3175635c7dee8dafee4ef4 206 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 115 201 17.236 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 XF_2213 81391d324b3175635c7dee8dafee4ef4 206 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 206 35.065 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 XF_2213 81391d324b3175635c7dee8dafee4ef4 206 SUPERFAMILY SSF101386 117 205 1.13E-19 T 14-10-2018 XF_2213 81391d324b3175635c7dee8dafee4ef4 206 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 119 200 5.4E-26 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 XF_2213 81391d324b3175635c7dee8dafee4ef4 206 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 202 5.2E-11 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 XF_a0050 84dfa04805af15086da0b0bae18c1cdf 235 Gene3D G3DSA:3.40.50.300 30 199 2.8E-5 T 14-10-2018 XF_a0050 84dfa04805af15086da0b0bae18c1cdf 235 SUPERFAMILY SSF52540 2 146 1.98E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1425 9dd3fbd1dfd808125067a1eab6c7280f 324 SUPERFAMILY SSF56349 125 322 1.32E-54 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XF_1425 9dd3fbd1dfd808125067a1eab6c7280f 324 Pfam PF00589 Phage integrase family 131 306 1.1E-45 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XF_1425 9dd3fbd1dfd808125067a1eab6c7280f 324 SUPERFAMILY SSF47823 23 119 3.34E-30 T 14-10-2018 XF_1425 9dd3fbd1dfd808125067a1eab6c7280f 324 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 25 324 56.995 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD XF_1425 9dd3fbd1dfd808125067a1eab6c7280f 324 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 23 324 55.147 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 XF_1425 9dd3fbd1dfd808125067a1eab6c7280f 324 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 29 324 3.2E-107 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 XF_1425 9dd3fbd1dfd808125067a1eab6c7280f 324 Gene3D G3DSA:1.10.443.10 130 318 6.4E-65 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XF_1425 9dd3fbd1dfd808125067a1eab6c7280f 324 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 27 107 3.3E-15 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XF_1425 9dd3fbd1dfd808125067a1eab6c7280f 324 Gene3D G3DSA:1.10.150.130 22 117 1.2E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal XF_1187 f8c107eae354b5c508d916e207caab04 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 14-10-2018 IPR033135 ClpP, histidine active site XF_1187 f8c107eae354b5c508d916e207caab04 208 SUPERFAMILY SSF52096 17 200 5.39E-72 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XF_1187 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 4.6E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XF_1187 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 4.6E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XF_1187 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 4.6E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XF_1187 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 4.6E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XF_1187 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 4.6E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XF_1187 f8c107eae354b5c508d916e207caab04 208 Gene3D G3DSA:3.90.226.10 2 202 1.9E-82 T 14-10-2018 XF_1187 f8c107eae354b5c508d916e207caab04 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 14-10-2018 IPR018215 ClpP, Ser active site XF_1187 f8c107eae354b5c508d916e207caab04 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 43.433 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XF_1187 f8c107eae354b5c508d916e207caab04 208 Pfam PF00574 Clp protease 19 199 2.9E-86 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA XF_1187 f8c107eae354b5c508d916e207caab04 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 197 1.2E-104 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XF_0406 d836050acbd8d9f36adc152b08297681 319 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 312 2.0E-118 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 XF_0406 d836050acbd8d9f36adc152b08297681 319 Pfam PF03741 Integral membrane protein TerC family 80 282 1.7E-54 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 XF_0862 a947fbed58db4b33b0d3062042c969a5 275 Gene3D G3DSA:2.70.70.10 125 260 4.9E-34 T 14-10-2018 IPR011055 Duplicated hybrid motif XF_0862 a947fbed58db4b33b0d3062042c969a5 275 SUPERFAMILY SSF51261 127 251 1.05E-28 T 14-10-2018 IPR011055 Duplicated hybrid motif XF_0862 a947fbed58db4b33b0d3062042c969a5 275 Pfam PF01551 Peptidase family M23 152 250 1.3E-24 T 14-10-2018 IPR016047 Peptidase M23 XF_2398 0455034d120d68b5f5b95c0133249838 473 ProSitePatterns PS00543 HlyD family secretion proteins signature. 437 459 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 XF_2398 0455034d120d68b5f5b95c0133249838 473 Pfam PF13437 HlyD family secretion protein 324 430 6.7E-19 T 14-10-2018 XF_2398 0455034d120d68b5f5b95c0133249838 473 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 55 473 2.6E-121 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 XF_2398 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:2.40.50.100 94 128 1.6E-6 T 14-10-2018 XF_2398 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:2.40.50.100 325 361 2.4E-17 T 14-10-2018 XF_2398 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:1.10.287.470 259 324 2.4E-17 T 14-10-2018 XF_2398 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:1.10.287.470 129 221 1.6E-6 T 14-10-2018 XF_2398 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 437 452 5.4E-59 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XF_2398 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 370 394 5.4E-59 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XF_2398 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 337 358 5.4E-59 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XF_2398 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 394 417 5.4E-59 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XF_2398 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 452 472 5.4E-59 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XF_2398 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 88 5.4E-59 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XF_2398 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 107 127 5.4E-59 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XF_2398 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:2.40.30.170 362 450 2.4E-17 T 14-10-2018 XF_2398 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:2.40.30.170 83 93 1.6E-6 T 14-10-2018 XF_2608 0951b8cff07ca32b9a151f64625611a2 220 SUPERFAMILY SSF46894 143 208 7.48E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XF_2608 0951b8cff07ca32b9a151f64625611a2 220 Pfam PF00072 Response regulator receiver domain 5 116 3.8E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2608 0951b8cff07ca32b9a151f64625611a2 220 Gene3D G3DSA:3.40.50.12740 3 208 1.2E-51 T 14-10-2018 XF_2608 0951b8cff07ca32b9a151f64625611a2 220 SMART SM00421 146 203 1.3E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XF_2608 0951b8cff07ca32b9a151f64625611a2 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 203 2.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XF_2608 0951b8cff07ca32b9a151f64625611a2 220 SUPERFAMILY SSF52172 2 132 1.27E-27 T 14-10-2018 IPR011006 CheY-like superfamily XF_2608 0951b8cff07ca32b9a151f64625611a2 220 SMART SM00448 3 116 3.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2608 0951b8cff07ca32b9a151f64625611a2 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XF_2608 0951b8cff07ca32b9a151f64625611a2 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XF_2608 0951b8cff07ca32b9a151f64625611a2 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XF_2477 a9d008566fadadaa4f54bf51e5f673c8 226 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 177 4.2E-44 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XF_2477 a9d008566fadadaa4f54bf51e5f673c8 226 Pfam PF13500 AAA domain 5 210 5.5E-36 T 14-10-2018 XF_2477 a9d008566fadadaa4f54bf51e5f673c8 226 PIRSF PIRSF006755 2 224 1.3E-79 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XF_2477 a9d008566fadadaa4f54bf51e5f673c8 226 SUPERFAMILY SSF52540 1 213 7.64E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2477 a9d008566fadadaa4f54bf51e5f673c8 226 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 213 26.582 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XF_2477 a9d008566fadadaa4f54bf51e5f673c8 226 Gene3D G3DSA:3.40.50.300 4 216 2.6E-63 T 14-10-2018 XF_2456 c6fadc41901e36ffceb8a528ff300514 231 PIRSF PIRSF002764 7 231 9.7E-75 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria XF_2456 c6fadc41901e36ffceb8a528ff300514 231 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 17 227 1.9E-60 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria XF_2456 c6fadc41901e36ffceb8a528ff300514 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 112 130 4.7E-48 T 14-10-2018 XF_2456 c6fadc41901e36ffceb8a528ff300514 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 64 81 4.7E-48 T 14-10-2018 XF_2456 c6fadc41901e36ffceb8a528ff300514 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 167 186 4.7E-48 T 14-10-2018 XF_2456 c6fadc41901e36ffceb8a528ff300514 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 38 59 4.7E-48 T 14-10-2018 XF_2456 c6fadc41901e36ffceb8a528ff300514 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 87 110 4.7E-48 T 14-10-2018 XF_2456 c6fadc41901e36ffceb8a528ff300514 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 204 227 4.7E-48 T 14-10-2018 XF_2456 c6fadc41901e36ffceb8a528ff300514 231 Pfam PF03379 CcmB protein 16 228 2.0E-65 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_0657 8e78b0529c1b934179fff8163e9f57d1 576 PRINTS PR00113 Alkaline phosphatase signature 242 252 4.1E-42 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XF_0657 8e78b0529c1b934179fff8163e9f57d1 576 PRINTS PR00113 Alkaline phosphatase signature 330 359 4.1E-42 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XF_0657 8e78b0529c1b934179fff8163e9f57d1 576 PRINTS PR00113 Alkaline phosphatase signature 77 97 4.1E-42 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XF_0657 8e78b0529c1b934179fff8163e9f57d1 576 PRINTS PR00113 Alkaline phosphatase signature 179 199 4.1E-42 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XF_0657 8e78b0529c1b934179fff8163e9f57d1 576 PRINTS PR00113 Alkaline phosphatase signature 133 148 4.1E-42 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XF_0657 8e78b0529c1b934179fff8163e9f57d1 576 SUPERFAMILY SSF53649 59 540 2.13E-143 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 XF_0657 8e78b0529c1b934179fff8163e9f57d1 576 Pfam PF00245 Alkaline phosphatase 77 539 3.0E-124 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XF_0657 8e78b0529c1b934179fff8163e9f57d1 576 Gene3D G3DSA:3.40.720.10 50 556 1.7E-170 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XF_0657 8e78b0529c1b934179fff8163e9f57d1 576 SMART SM00098 78 543 4.1E-147 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XF_1084 c758e083ca401dc3f1670c4d00f6f2c1 213 PIRSF PIRSF009320 1 210 4.9E-32 T 14-10-2018 XF_1084 c758e083ca401dc3f1670c4d00f6f2c1 213 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 161 5.2E-18 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain XF_1084 c758e083ca401dc3f1670c4d00f6f2c1 213 Gene3D G3DSA:3.40.50.300 4 213 1.3E-40 T 14-10-2018 XF_1084 c758e083ca401dc3f1670c4d00f6f2c1 213 SUPERFAMILY SSF52540 1 211 3.19E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1318 34f9b0c04cd8101103ba6078d8eacd13 467 SUPERFAMILY SSF48452 136 258 3.67E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_1318 34f9b0c04cd8101103ba6078d8eacd13 467 Gene3D G3DSA:1.25.40.10 16 262 1.8E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_0704 efdce9bd9615d696b1591f9e58c52ece 210 Pfam PF02498 BRO family, N-terminal domain 17 112 1.9E-7 T 14-10-2018 IPR003497 BRO N-terminal domain XF_0704 efdce9bd9615d696b1591f9e58c52ece 210 SMART SM01040 14 111 9.4E-19 T 14-10-2018 IPR003497 BRO N-terminal domain XF_0676 c4b924f935f3a22fe862749cfbdfefcf 330 Gene3D G3DSA:3.40.50.300 15 182 1.1E-41 T 14-10-2018 XF_0676 c4b924f935f3a22fe862749cfbdfefcf 330 Pfam PF13177 DNA polymerase III, delta subunit 20 181 2.3E-33 T 14-10-2018 XF_0676 c4b924f935f3a22fe862749cfbdfefcf 330 SUPERFAMILY SSF52540 18 219 1.39E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2714 e48a9ed1de0557bcba942456e0e5534c 465 SUPERFAMILY SSF51445 82 397 1.58E-70 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily XF_2714 e48a9ed1de0557bcba942456e0e5534c 465 Pfam PF01120 Alpha-L-fucosidase 76 335 1.0E-71 T 14-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XF_2714 e48a9ed1de0557bcba942456e0e5534c 465 Gene3D G3DSA:3.20.20.80 78 407 5.7E-84 T 14-10-2018 XF_2714 e48a9ed1de0557bcba942456e0e5534c 465 SMART SM00812 82 457 8.4E-133 T 14-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XF_0616 1f54d80d57f043f3798bc0c81352bed4 95 SUPERFAMILY SSF50129 1 94 1.53E-30 T 14-10-2018 IPR011032 GroES-like superfamily XF_0616 1f54d80d57f043f3798bc0c81352bed4 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 5.2E-31 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XF_0616 1f54d80d57f043f3798bc0c81352bed4 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 XF_0616 1f54d80d57f043f3798bc0c81352bed4 95 SMART SM00883 2 94 5.9E-50 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XF_0616 1f54d80d57f043f3798bc0c81352bed4 95 Gene3D G3DSA:2.30.33.40 1 95 7.4E-37 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 XF_0616 1f54d80d57f043f3798bc0c81352bed4 95 PRINTS PR00297 10kDa chaperonin signature 81 94 2.0E-31 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XF_0616 1f54d80d57f043f3798bc0c81352bed4 95 PRINTS PR00297 10kDa chaperonin signature 3 18 2.0E-31 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XF_0616 1f54d80d57f043f3798bc0c81352bed4 95 PRINTS PR00297 10kDa chaperonin signature 60 72 2.0E-31 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XF_0616 1f54d80d57f043f3798bc0c81352bed4 95 PRINTS PR00297 10kDa chaperonin signature 25 46 2.0E-31 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XF_0616 1f54d80d57f043f3798bc0c81352bed4 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 24.718 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XF_1549 f3ca66dd4b920d5ac0bef0ae79373ed1 391 SUPERFAMILY SSF52777 162 389 1.2E-86 T 14-10-2018 XF_1549 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 162 388 6.0E-83 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 XF_1549 f3ca66dd4b920d5ac0bef0ae79373ed1 391 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XF_1549 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Gene3D G3DSA:4.10.320.10 112 152 3.2E-9 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XF_1549 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Gene3D G3DSA:2.40.50.100 1 94 1.9E-21 T 14-10-2018 XF_1549 f3ca66dd4b920d5ac0bef0ae79373ed1 391 SUPERFAMILY SSF51230 1 85 8.38E-25 T 14-10-2018 IPR011053 Single hybrid motif XF_1549 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Pfam PF00364 Biotin-requiring enzyme 4 76 6.8E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment XF_1549 f3ca66dd4b920d5ac0bef0ae79373ed1 391 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 390 1.1E-181 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 XF_1549 f3ca66dd4b920d5ac0bef0ae79373ed1 391 SUPERFAMILY SSF47005 106 149 5.1E-8 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XF_1549 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Pfam PF02817 e3 binding domain 114 144 1.4E-6 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 XF_1549 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Gene3D G3DSA:3.30.559.10 159 390 9.9E-95 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XF_2698 671fbef60b1014c8e6aec6d1a03dcc1e 113 PIRSF PIRSF000077 2 108 3.7E-36 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 XF_2698 671fbef60b1014c8e6aec6d1a03dcc1e 113 PRINTS PR00421 Thioredoxin family signature 72 83 3.2E-5 T 14-10-2018 XF_2698 671fbef60b1014c8e6aec6d1a03dcc1e 113 PRINTS PR00421 Thioredoxin family signature 32 41 3.2E-5 T 14-10-2018 XF_2698 671fbef60b1014c8e6aec6d1a03dcc1e 113 PRINTS PR00421 Thioredoxin family signature 24 32 3.2E-5 T 14-10-2018 XF_2698 671fbef60b1014c8e6aec6d1a03dcc1e 113 SUPERFAMILY SSF52833 3 109 1.3E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_2698 671fbef60b1014c8e6aec6d1a03dcc1e 113 Pfam PF00085 Thioredoxin 5 106 3.7E-28 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 XF_2698 671fbef60b1014c8e6aec6d1a03dcc1e 113 Gene3D G3DSA:3.40.30.10 4 112 1.0E-30 T 14-10-2018 XF_2698 671fbef60b1014c8e6aec6d1a03dcc1e 113 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.7E-33 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 XF_2276 038afa208ed3b2b38cb9143aa1f8fc7d 563 Pfam PF00501 AMP-binding enzyme 34 459 3.6E-55 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XF_2276 038afa208ed3b2b38cb9143aa1f8fc7d 563 SUPERFAMILY SSF56801 18 524 7.33E-74 T 14-10-2018 XF_2276 038afa208ed3b2b38cb9143aa1f8fc7d 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 193 204 - T 14-10-2018 IPR020845 AMP-binding, conserved site XF_2276 038afa208ed3b2b38cb9143aa1f8fc7d 563 Gene3D G3DSA:3.40.50.12780 12 454 5.1E-70 T 14-10-2018 XF_1502 9672d6ac25a1dc631d53c05ba52271a0 99 Pfam PF01192 RNA polymerase Rpb6 8 60 2.2E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XF_1502 9672d6ac25a1dc631d53c05ba52271a0 99 SMART SM01409 8 62 7.8E-17 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XF_1502 9672d6ac25a1dc631d53c05ba52271a0 99 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.8E-20 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_1502 9672d6ac25a1dc631d53c05ba52271a0 99 SUPERFAMILY SSF63562 1 78 9.16E-25 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XF_1502 9672d6ac25a1dc631d53c05ba52271a0 99 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 63 17.729 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XF_1502 9672d6ac25a1dc631d53c05ba52271a0 99 Gene3D G3DSA:3.90.940.10 1 94 4.8E-28 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XF_0091 c771c8d1f194a93094ee4e8072a6a42a 298 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 56 69 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XF_0091 c771c8d1f194a93094ee4e8072a6a42a 298 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 22 276 1.1E-94 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 XF_0091 c771c8d1f194a93094ee4e8072a6a42a 298 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XF_0091 c771c8d1f194a93094ee4e8072a6a42a 298 Gene3D G3DSA:3.20.20.20 1 284 1.1E-107 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XF_0091 c771c8d1f194a93094ee4e8072a6a42a 298 SUPERFAMILY SSF51717 10 278 3.53E-98 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XF_0091 c771c8d1f194a93094ee4e8072a6a42a 298 Pfam PF00809 Pterin binding enzyme 23 262 6.1E-79 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XF_0453 8ab464d78e8914b70bc4ac4d61735500 287 PIRSF PIRSF005651 1 287 4.0E-77 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 XF_0453 8ab464d78e8914b70bc4ac4d61735500 287 Gene3D G3DSA:3.30.479.30 48 187 1.3E-15 T 14-10-2018 XF_0453 8ab464d78e8914b70bc4ac4d61735500 287 SUPERFAMILY SSF117892 51 190 3.27E-19 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily XF_0453 8ab464d78e8914b70bc4ac4d61735500 287 Pfam PF01145 SPFH domain / Band 7 family 23 201 3.3E-24 T 14-10-2018 IPR001107 Band 7 domain XF_0453 8ab464d78e8914b70bc4ac4d61735500 287 SMART SM00244 19 184 2.4E-17 T 14-10-2018 IPR001107 Band 7 domain XF_2357 c7f1a13ef964f2325efee348cabdaec2 165 Pfam PF01928 CYTH domain 2 141 3.9E-16 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 XF_2357 c7f1a13ef964f2325efee348cabdaec2 165 PIRSF PIRSF016487 1 165 1.9E-63 T 14-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like XF_2357 c7f1a13ef964f2325efee348cabdaec2 165 Gene3D G3DSA:2.40.320.10 1 157 1.3E-41 T 14-10-2018 XF_2357 c7f1a13ef964f2325efee348cabdaec2 165 SUPERFAMILY SSF55154 1 154 2.45E-38 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 XF_2357 c7f1a13ef964f2325efee348cabdaec2 165 SMART SM01118 2 155 4.0E-21 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 XF_2070 7401b13b3ec4a39cbb5cc91f730d05c0 61 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 50 2.1E-5 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XF_2070 7401b13b3ec4a39cbb5cc91f730d05c0 61 Gene3D G3DSA:3.30.2310.20 1 58 6.5E-10 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XF_0368 8c010bb968add1f45e98709f8b43aa5d 831 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 91 778 1.0E-175 T 14-10-2018 XF_0368 8c010bb968add1f45e98709f8b43aa5d 831 Gene3D G3DSA:1.10.3810.10 74 271 6.1E-69 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0368 8c010bb968add1f45e98709f8b43aa5d 831 Pfam PF00912 Transglycosylase 89 257 1.8E-57 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0368 8c010bb968add1f45e98709f8b43aa5d 831 SUPERFAMILY SSF53955 69 285 5.62E-70 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_0368 8c010bb968add1f45e98709f8b43aa5d 831 SUPERFAMILY SSF56601 238 810 6.69E-118 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XF_0368 8c010bb968add1f45e98709f8b43aa5d 831 Pfam PF17092 Penicillin-binding protein OB-like domain 344 441 2.4E-14 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0368 8c010bb968add1f45e98709f8b43aa5d 831 Pfam PF00905 Penicillin binding protein transpeptidase domain 446 626 5.8E-25 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XF_2421 4ddf19f4122c8d73f8465f758d2d1a88 109 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 33 109 3.0E-37 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2421 4ddf19f4122c8d73f8465f758d2d1a88 109 SUPERFAMILY SSF46992 23 106 1.83E-29 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2421 4ddf19f4122c8d73f8465f758d2d1a88 109 Pfam PF01649 Ribosomal protein S20 22 104 9.3E-26 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2421 4ddf19f4122c8d73f8465f758d2d1a88 109 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 21 105 16.986 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2421 4ddf19f4122c8d73f8465f758d2d1a88 109 Gene3D G3DSA:1.20.58.110 21 107 5.0E-27 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2421 4ddf19f4122c8d73f8465f758d2d1a88 109 TIGRFAM TIGR00029 S20: ribosomal protein bS20 22 106 5.8E-27 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1026 d5d97efa17b8b96a57c730c0540a8313 905 SMART SM00869 637 897 4.6E-24 T 14-10-2018 IPR005546 Autotransporter beta-domain XF_1026 d5d97efa17b8b96a57c730c0540a8313 905 Gene3D G3DSA:3.40.50.200 7 341 1.7E-60 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XF_1026 d5d97efa17b8b96a57c730c0540a8313 905 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 36 47 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site XF_1026 d5d97efa17b8b96a57c730c0540a8313 905 Pfam PF12951 Passenger-associated-transport-repeat 372 401 1.5E-8 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat XF_1026 d5d97efa17b8b96a57c730c0540a8313 905 Gene3D G3DSA:2.40.128.130 595 902 2.4E-36 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily XF_1026 d5d97efa17b8b96a57c730c0540a8313 905 SUPERFAMILY SSF103515 603 901 4.45E-37 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily XF_1026 d5d97efa17b8b96a57c730c0540a8313 905 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 282 292 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site XF_1026 d5d97efa17b8b96a57c730c0540a8313 905 SUPERFAMILY SSF52743 14 342 9.3E-59 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XF_1026 d5d97efa17b8b96a57c730c0540a8313 905 Pfam PF00082 Subtilase family 31 332 1.1E-38 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 XF_1026 d5d97efa17b8b96a57c730c0540a8313 905 Pfam PF03797 Autotransporter beta-domain 641 876 2.0E-31 T 14-10-2018 IPR005546 Autotransporter beta-domain XF_1026 d5d97efa17b8b96a57c730c0540a8313 905 PRINTS PR00723 Subtilisin serine protease family (S8) signature 31 50 2.6E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related XF_1026 d5d97efa17b8b96a57c730c0540a8313 905 PRINTS PR00723 Subtilisin serine protease family (S8) signature 71 84 2.6E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related XF_1026 d5d97efa17b8b96a57c730c0540a8313 905 PRINTS PR00723 Subtilisin serine protease family (S8) signature 281 297 2.6E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related XF_1026 d5d97efa17b8b96a57c730c0540a8313 905 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 371 402 9.1E-11 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat XF_2420 f9ff694daad7e2a3416fc6cdb60bc678 536 Pfam PF03023 MviN-like protein 31 498 1.9E-119 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XF_2420 f9ff694daad7e2a3416fc6cdb60bc678 536 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 6 493 19.417 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XF_2420 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 262 288 8.6E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XF_2420 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 435 452 8.6E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XF_2420 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 136 160 8.6E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XF_2420 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 160 181 8.6E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XF_2420 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 360 379 8.6E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XF_2420 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 55 71 8.6E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XF_2420 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 36 55 8.6E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XF_2420 f9ff694daad7e2a3416fc6cdb60bc678 536 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 6 524 3.4E-116 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XF_2420 f9ff694daad7e2a3416fc6cdb60bc678 536 PIRSF PIRSF002869 1 533 5.0E-140 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XF_1734 0e1b91cb0d5029c2c1b4869286135118 348 SUPERFAMILY SSF51735 147 311 1.21E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1734 0e1b91cb0d5029c2c1b4869286135118 348 SMART SM00829 10 341 7.0E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XF_1734 0e1b91cb0d5029c2c1b4869286135118 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XF_1734 0e1b91cb0d5029c2c1b4869286135118 348 SUPERFAMILY SSF50129 7 170 1.67E-50 T 14-10-2018 IPR011032 GroES-like superfamily XF_1734 0e1b91cb0d5029c2c1b4869286135118 348 Gene3D G3DSA:3.40.50.720 158 313 3.8E-129 T 14-10-2018 XF_1734 0e1b91cb0d5029c2c1b4869286135118 348 Gene3D G3DSA:3.90.180.10 12 341 3.8E-129 T 14-10-2018 XF_1734 0e1b91cb0d5029c2c1b4869286135118 348 Pfam PF00107 Zinc-binding dehydrogenase 184 305 4.0E-22 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XF_1734 0e1b91cb0d5029c2c1b4869286135118 348 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 177 204 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XF_1734 0e1b91cb0d5029c2c1b4869286135118 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 142 2.8E-26 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XF_1530 72c054cc388ea6739e29a2a7a85bc2ec 206 Pfam PF00578 AhpC/TSA family 30 152 1.6E-32 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XF_1530 72c054cc388ea6739e29a2a7a85bc2ec 206 SUPERFAMILY SSF52833 23 205 3.19E-55 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_1530 72c054cc388ea6739e29a2a7a85bc2ec 206 TIGRFAM TIGR03137 AhpC: peroxiredoxin 21 206 3.0E-99 T 14-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 XF_1530 72c054cc388ea6739e29a2a7a85bc2ec 206 PIRSF PIRSF000239 17 206 1.2E-52 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XF_1530 72c054cc388ea6739e29a2a7a85bc2ec 206 Gene3D G3DSA:3.40.30.10 17 205 8.2E-60 T 14-10-2018 XF_0590 e5fe51ff33082728f835ea81b0aa0fa5 233 Gene3D G3DSA:3.40.50.300 2 160 1.1E-24 T 14-10-2018 XF_0590 e5fe51ff33082728f835ea81b0aa0fa5 233 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 229 1.6E-71 T 14-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 XF_0590 e5fe51ff33082728f835ea81b0aa0fa5 233 SMART SM00382 40 163 1.7E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_0590 e5fe51ff33082728f835ea81b0aa0fa5 233 Gene3D G3DSA:1.10.8.60 164 229 6.6E-23 T 14-10-2018 XF_0590 e5fe51ff33082728f835ea81b0aa0fa5 233 Pfam PF01695 IstB-like ATP binding protein 28 87 1.2E-6 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 XF_0590 e5fe51ff33082728f835ea81b0aa0fa5 233 SUPERFAMILY SSF52540 21 209 6.53E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0300 6d698432a96fa2dce446b0c4d0f02680 78 Pfam PF13533 Biotin-lipoyl like 26 65 1.1E-12 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain XF_0300 6d698432a96fa2dce446b0c4d0f02680 78 Gene3D G3DSA:1.10.287.470 59 68 1.8E-13 T 14-10-2018 XF_0300 6d698432a96fa2dce446b0c4d0f02680 78 Gene3D G3DSA:2.40.30.170 15 24 1.8E-13 T 14-10-2018 XF_0300 6d698432a96fa2dce446b0c4d0f02680 78 SUPERFAMILY SSF111369 16 74 2.48E-9 T 14-10-2018 XF_0300 6d698432a96fa2dce446b0c4d0f02680 78 Gene3D G3DSA:2.40.50.100 25 58 1.8E-13 T 14-10-2018 XF_1410 9ae9fb50c5ca48f07082c4acf626147a 176 Gene3D G3DSA:2.60.450.10 23 158 3.3E-30 T 14-10-2018 XF_1410 9ae9fb50c5ca48f07082c4acf626147a 176 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 23 161 2.8E-34 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 XF_1410 9ae9fb50c5ca48f07082c4acf626147a 176 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 3 161 21.773 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 XF_1410 9ae9fb50c5ca48f07082c4acf626147a 176 Pfam PF03968 OstA-like protein 34 143 1.9E-21 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal XF_2333 c3381a3c2340fab4df0546fa834b31ba 301 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XF_2333 c3381a3c2340fab4df0546fa834b31ba 301 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 283 5.0E-72 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XF_2333 c3381a3c2340fab4df0546fa834b31ba 301 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 285 7.6E-75 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XF_2333 c3381a3c2340fab4df0546fa834b31ba 301 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 289 19.423 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XF_2561 84624f712282791db2e79ce1c5a5937f 143 TIGRFAM TIGR00166 S6: ribosomal protein bS6 3 93 6.6E-31 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2561 84624f712282791db2e79ce1c5a5937f 143 Gene3D G3DSA:3.30.70.60 2 93 8.5E-29 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 XF_2561 84624f712282791db2e79ce1c5a5937f 143 SUPERFAMILY SSF54995 2 104 4.97E-34 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2561 84624f712282791db2e79ce1c5a5937f 143 Pfam PF01250 Ribosomal protein S6 4 92 2.2E-26 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2561 84624f712282791db2e79ce1c5a5937f 143 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 2 95 20.824 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 XF_0155 1615a3aa4ada87ba68f4af99d89eed9d 295 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 29 289 2.2E-130 T 14-10-2018 IPR017483 Conserved hypothetical protein CHP03034 XF_0155 1615a3aa4ada87ba68f4af99d89eed9d 295 Pfam PF11692 Protein of unknown function (DUF3289) 30 289 2.6E-104 T 14-10-2018 IPR017483 Conserved hypothetical protein CHP03034 XF_1993 42fd1ff630444d8d86c925a62dab4cba 344 Gene3D G3DSA:3.40.50.12580 139 251 6.3E-6 T 14-10-2018 XF_1993 42fd1ff630444d8d86c925a62dab4cba 344 SUPERFAMILY SSF53756 13 310 7.53E-29 T 14-10-2018 XF_1993 42fd1ff630444d8d86c925a62dab4cba 344 PIRSF PIRSF028458 1 344 1.5E-187 T 14-10-2018 IPR016886 Predicted glycerophosphotransferase UCP028458 XF_0044 39eebe53258735d8bd477d22ff15ccf3 179 Pfam PF13302 Acetyltransferase (GNAT) domain 22 160 1.2E-8 T 14-10-2018 IPR000182 GNAT domain XF_0044 39eebe53258735d8bd477d22ff15ccf3 179 Gene3D G3DSA:3.40.630.30 13 178 2.4E-29 T 14-10-2018 XF_0044 39eebe53258735d8bd477d22ff15ccf3 179 SUPERFAMILY SSF55729 22 165 1.95E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase XF_2066 9bcb2cfe73dcea1e7a65606fcb4eea7e 102 Gene3D G3DSA:3.30.2310.20 8 102 4.4E-28 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XF_2066 9bcb2cfe73dcea1e7a65606fcb4eea7e 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 10 100 2.5E-20 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XF_2066 9bcb2cfe73dcea1e7a65606fcb4eea7e 102 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 9 99 5.9E-9 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XF_1928 50bfee1fa917366eee7c05e1416dcb57 127 SUPERFAMILY SSF46894 34 85 5.67E-8 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XF_1928 50bfee1fa917366eee7c05e1416dcb57 127 Gene3D G3DSA:1.10.10.10 24 90 1.7E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1928 50bfee1fa917366eee7c05e1416dcb57 127 Pfam PF00486 Transcriptional regulatory protein, C terminal 33 85 1.3E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XF_1137 70a4cc995363d7f9704468ff1711518d 229 Pfam PF01965 DJ-1/PfpI family 26 222 1.4E-13 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 XF_1137 70a4cc995363d7f9704468ff1711518d 229 SUPERFAMILY SSF52317 6 225 2.19E-66 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_1137 70a4cc995363d7f9704468ff1711518d 229 Gene3D G3DSA:3.40.50.880 5 226 7.4E-67 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like XF_0762 6ea544cb9bfb3c3750efa67dd833d105 191 Pfam PF00692 dUTPase 81 186 4.0E-7 T 14-10-2018 IPR029054 dUTPase-like XF_0762 6ea544cb9bfb3c3750efa67dd833d105 191 SUPERFAMILY SSF51283 3 190 7.33E-50 T 14-10-2018 IPR036157 dUTPase-like superfamily XF_0762 6ea544cb9bfb3c3750efa67dd833d105 191 Gene3D G3DSA:2.70.40.10 1 160 1.8E-53 T 14-10-2018 IPR036157 dUTPase-like superfamily XF_0762 6ea544cb9bfb3c3750efa67dd833d105 191 Hamap MF_00146 dCTP deaminase [dcd]. 1 191 27.723 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 XF_0762 6ea544cb9bfb3c3750efa67dd833d105 191 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 190 4.7E-47 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 8.5E-235 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 Gene3D G3DSA:3.30.499.10 333 474 4.6E-49 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 SUPERFAMILY SSF53732 3 472 5.49E-162 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 473 61.332 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 Gene3D G3DSA:3.30.499.20 6 292 2.1E-95 T 14-10-2018 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 139 154 3.0E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 201 214 3.0E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 125 138 3.0E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 349 360 3.0E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 406 419 3.0E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 215 228 3.0E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 88 101 3.0E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 114 122 3.0E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 292 306 3.0E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XF_2375 49362e44be7c2a27604ed4ff50e0b21a 474 Pfam PF00330 Aconitase family (aconitate hydratase) 9 464 8.7E-156 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XF_1614 52406473a0af108e26a2c5fef46c468a 494 SUPERFAMILY SSF56601 51 484 4.75E-82 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XF_1614 52406473a0af108e26a2c5fef46c468a 494 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 70 471 3.0E-94 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XF_1614 52406473a0af108e26a2c5fef46c468a 494 Gene3D G3DSA:3.50.80.20 105 209 3.9E-19 T 14-10-2018 XF_1614 52406473a0af108e26a2c5fef46c468a 494 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 41 479 5.1E-102 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XF_1614 52406473a0af108e26a2c5fef46c468a 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 309 331 9.0E-23 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XF_1614 52406473a0af108e26a2c5fef46c468a 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 448 461 9.0E-23 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XF_1614 52406473a0af108e26a2c5fef46c468a 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 381 395 9.0E-23 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XF_1614 52406473a0af108e26a2c5fef46c468a 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 81 100 9.0E-23 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XF_1614 52406473a0af108e26a2c5fef46c468a 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 366 380 9.0E-23 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XF_1614 52406473a0af108e26a2c5fef46c468a 494 Gene3D G3DSA:3.40.710.10 234 489 1.3E-50 T 14-10-2018 XF_1365 c1d394c60bc5b2655de4e4be9f7a8206 293 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 47 278 2.4E-60 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 XF_1365 c1d394c60bc5b2655de4e4be9f7a8206 293 Pfam PF02666 Phosphatidylserine decarboxylase 61 277 6.8E-50 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 XF_1365 c1d394c60bc5b2655de4e4be9f7a8206 293 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 8 280 43.38 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 XF_2367 5e4bec1139ec48725fbd9b05d727cf40 484 Pfam PF13727 CoA-binding domain 77 255 3.7E-29 T 14-10-2018 XF_2367 5e4bec1139ec48725fbd9b05d727cf40 484 Pfam PF02397 Bacterial sugar transferase 293 478 2.1E-64 T 14-10-2018 IPR003362 Bacterial sugar transferase XF_2367 5e4bec1139ec48725fbd9b05d727cf40 484 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 33 484 3.9E-157 T 14-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 XF_2367 5e4bec1139ec48725fbd9b05d727cf40 484 Gene3D G3DSA:3.40.50.720 155 278 1.9E-12 T 14-10-2018 XF_2367 5e4bec1139ec48725fbd9b05d727cf40 484 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 33 484 7.4E-139 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase XF_1637 152ee06f006fed01b8af32c4d8c19078 294 Gene3D G3DSA:3.90.550.10 14 242 2.5E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_1637 152ee06f006fed01b8af32c4d8c19078 294 Pfam PF00535 Glycosyl transferase family 2 22 163 6.4E-18 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XF_1637 152ee06f006fed01b8af32c4d8c19078 294 SUPERFAMILY SSF53448 20 268 1.16E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_0777 063380736ae0d9860412f0b296943b9c 788 Gene3D G3DSA:1.20.1640.10 210 398 3.5E-5 T 14-10-2018 XF_0777 063380736ae0d9860412f0b296943b9c 788 Pfam PF03176 MMPL family 202 418 2.7E-6 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 XF_0777 063380736ae0d9860412f0b296943b9c 788 SUPERFAMILY SSF82866 628 770 1.44E-15 T 14-10-2018 XF_0777 063380736ae0d9860412f0b296943b9c 788 SUPERFAMILY SSF82866 217 392 1.83E-19 T 14-10-2018 XF_1487 ec036d7e360a0e5d32a9207767593748 253 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 18 252 36.88 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 XF_1487 ec036d7e360a0e5d32a9207767593748 253 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 38 53 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 XF_1487 ec036d7e360a0e5d32a9207767593748 253 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 27 252 6.1E-81 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 XF_1487 ec036d7e360a0e5d32a9207767593748 253 Pfam PF01209 ubiE/COQ5 methyltransferase family 21 252 1.6E-89 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 XF_1487 ec036d7e360a0e5d32a9207767593748 253 SUPERFAMILY SSF53335 22 249 1.13E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_1487 ec036d7e360a0e5d32a9207767593748 253 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 160 174 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 XF_1487 ec036d7e360a0e5d32a9207767593748 253 Gene3D G3DSA:3.40.50.150 33 253 9.6E-70 T 14-10-2018 XF_2025 99b4aeae7032c3a5c53908ae71973ea5 363 SMART SM00493 211 289 3.2E-4 T 14-10-2018 IPR006171 TOPRIM domain XF_2025 99b4aeae7032c3a5c53908ae71973ea5 363 Pfam PF13662 Toprim domain 212 284 1.6E-9 T 14-10-2018 IPR006171 TOPRIM domain XF_1547 fc53d02c2ba047523adafcb96a82463a 153 Pfam PF05433 Glycine zipper 2TM domain 61 107 8.9E-11 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 XF_1934 be88e0e6e6347b8ff9b9041e55032608 197 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 83 156 1.1E-16 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XF_1934 be88e0e6e6347b8ff9b9041e55032608 197 Gene3D G3DSA:3.90.470.20 83 189 5.4E-21 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XF_1934 be88e0e6e6347b8ff9b9041e55032608 197 SUPERFAMILY SSF56214 83 191 7.67E-24 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XF_1934 be88e0e6e6347b8ff9b9041e55032608 197 SUPERFAMILY SSF56214 16 74 4.39E-8 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XF_0011 98d667ab306f1e453f13c87ee920dc4c 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 136 2.9E-26 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 XF_0011 98d667ab306f1e453f13c87ee920dc4c 140 Gene3D G3DSA:3.30.420.270 63 132 1.4E-8 T 14-10-2018 XF_0172 07b7fb96a30d48877d795dfc93c11bae 598 Pfam PF05960 Bacterial protein of unknown function (DUF885) 37 572 1.4E-161 T 14-10-2018 IPR010281 Protein of unknown function DUF885 XF_0366 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 261 274 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XF_0366 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 Pfam PF00294 pfkB family carbohydrate kinase 1 310 9.2E-46 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB XF_0366 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 Gene3D G3DSA:3.40.1190.20 1 315 4.1E-73 T 14-10-2018 IPR029056 Ribokinase-like XF_0366 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 PRINTS PR00990 Ribokinase signature 224 235 1.2E-18 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XF_0366 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 PRINTS PR00990 Ribokinase signature 171 186 1.2E-18 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XF_0366 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 PRINTS PR00990 Ribokinase signature 102 115 1.2E-18 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XF_0366 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 PRINTS PR00990 Ribokinase signature 6 27 1.2E-18 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XF_0366 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 Hamap MF_01987 Ribokinase [rbsK]. 2 317 20.513 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 XF_0366 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 SUPERFAMILY SSF53613 1 311 1.14E-56 T 14-10-2018 IPR029056 Ribokinase-like XF_2184 c14cf24b4ae20f7e8f96c0f8a1dbda30 374 SUPERFAMILY SSF53955 64 369 6.65E-81 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_2184 c14cf24b4ae20f7e8f96c0f8a1dbda30 374 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 65 366 3.4E-113 T 14-10-2018 IPR011757 Lytic transglycosylase MltB XF_2184 c14cf24b4ae20f7e8f96c0f8a1dbda30 374 Gene3D G3DSA:1.10.530.10 102 363 3.6E-98 T 14-10-2018 XF_2184 c14cf24b4ae20f7e8f96c0f8a1dbda30 374 Gene3D G3DSA:1.10.8.350 68 248 3.6E-98 T 14-10-2018 XF_2184 c14cf24b4ae20f7e8f96c0f8a1dbda30 374 Pfam PF13406 Transglycosylase SLT domain 63 364 1.1E-88 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 XF_1869 a63247085b4fa089e1acce8fb0563b23 94 Pfam PF10734 Protein of unknown function (DUF2523) 5 83 9.8E-19 T 14-10-2018 IPR019670 Protein of unkown function DUF2523 XF_1113 8424fdff9e241c3ab89a91f64a40d1d9 386 Gene3D G3DSA:1.10.3210.10 173 374 1.3E-66 T 14-10-2018 XF_1113 8424fdff9e241c3ab89a91f64a40d1d9 386 SUPERFAMILY SSF109604 172 359 2.66E-38 T 14-10-2018 XF_1113 8424fdff9e241c3ab89a91f64a40d1d9 386 Pfam PF00072 Response regulator receiver domain 32 145 9.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1113 8424fdff9e241c3ab89a91f64a40d1d9 386 SUPERFAMILY SSF52172 30 185 4.41E-34 T 14-10-2018 IPR011006 CheY-like superfamily XF_1113 8424fdff9e241c3ab89a91f64a40d1d9 386 Pfam PF13487 HD domain 249 312 2.4E-18 T 14-10-2018 XF_1113 8424fdff9e241c3ab89a91f64a40d1d9 386 Gene3D G3DSA:3.40.50.2300 18 165 9.9E-33 T 14-10-2018 XF_1113 8424fdff9e241c3ab89a91f64a40d1d9 386 SMART SM00471 197 331 3.1E-5 T 14-10-2018 IPR003607 HD/PDEase domain XF_1113 8424fdff9e241c3ab89a91f64a40d1d9 386 SMART SM00448 30 145 7.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_1136 eaeb10aadc7376a3d8b150825e947fbf 352 Gene3D G3DSA:3.40.50.720 166 321 8.9E-124 T 14-10-2018 XF_1136 eaeb10aadc7376a3d8b150825e947fbf 352 SUPERFAMILY SSF50129 6 174 3.8E-49 T 14-10-2018 IPR011032 GroES-like superfamily XF_1136 eaeb10aadc7376a3d8b150825e947fbf 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XF_1136 eaeb10aadc7376a3d8b150825e947fbf 352 Pfam PF00107 Zinc-binding dehydrogenase 185 306 4.7E-17 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XF_1136 eaeb10aadc7376a3d8b150825e947fbf 352 SUPERFAMILY SSF51735 148 312 3.38E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1136 eaeb10aadc7376a3d8b150825e947fbf 352 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 178 205 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XF_1136 eaeb10aadc7376a3d8b150825e947fbf 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 143 9.6E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XF_1136 eaeb10aadc7376a3d8b150825e947fbf 352 Gene3D G3DSA:3.90.180.10 9 341 8.9E-124 T 14-10-2018 XF_0369 f0ee6e3961595bab97960687546c6040 392 Gene3D G3DSA:3.30.420.40 52 389 7.3E-83 T 14-10-2018 XF_0369 f0ee6e3961595bab97960687546c6040 392 Gene3D G3DSA:3.30.420.40 228 355 7.3E-83 T 14-10-2018 XF_0369 f0ee6e3961595bab97960687546c6040 392 SUPERFAMILY SSF53067 97 213 2.04E-9 T 14-10-2018 XF_0369 f0ee6e3961595bab97960687546c6040 392 Pfam PF11104 Type IV pilus assembly protein PilM; 53 391 2.0E-129 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM XF_0369 f0ee6e3961595bab97960687546c6040 392 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 47 391 9.5E-151 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM XF_0369 f0ee6e3961595bab97960687546c6040 392 Gene3D G3DSA:3.30.1490.300 127 186 7.3E-83 T 14-10-2018 XF_0369 f0ee6e3961595bab97960687546c6040 392 SUPERFAMILY SSF53067 230 390 3.94E-21 T 14-10-2018 XF_0369 f0ee6e3961595bab97960687546c6040 392 PIRSF PIRSF019169 39 392 1.1E-127 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM XF_0161 038610845d1e3d743915d99611fd5062 602 SUPERFAMILY SSF52540 48 575 2.47E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0161 038610845d1e3d743915d99611fd5062 602 Gene3D G3DSA:3.40.50.300 8 315 1.1E-5 T 14-10-2018 XF_0161 038610845d1e3d743915d99611fd5062 602 Gene3D G3DSA:3.40.50.300 316 579 1.1E-6 T 14-10-2018 XF_0161 038610845d1e3d743915d99611fd5062 602 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 460 600 1.1E-33 T 14-10-2018 IPR018760 Protein of unknown function DUF2326 XF_2622 dfff5d47a12a471deb841d69847cb0ff 85 PIRSF PIRSF002599 16 85 3.9E-21 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 XF_2622 dfff5d47a12a471deb841d69847cb0ff 85 SUPERFAMILY SSF50249 20 84 2.45E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2622 dfff5d47a12a471deb841d69847cb0ff 85 SMART SM00357 22 85 1.1E-25 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 XF_2622 dfff5d47a12a471deb841d69847cb0ff 85 Pfam PF00313 'Cold-shock' DNA-binding domain 23 84 3.5E-27 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XF_2622 dfff5d47a12a471deb841d69847cb0ff 85 PRINTS PR00050 Cold shock protein signature 23 38 1.5E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XF_2622 dfff5d47a12a471deb841d69847cb0ff 85 PRINTS PR00050 Cold shock protein signature 43 52 1.5E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XF_2622 dfff5d47a12a471deb841d69847cb0ff 85 PRINTS PR00050 Cold shock protein signature 58 76 1.5E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XF_2622 dfff5d47a12a471deb841d69847cb0ff 85 ProSitePatterns PS00352 'Cold-shock' domain signature. 34 52 - T 14-10-2018 IPR019844 Cold-shock conserved site XF_2622 dfff5d47a12a471deb841d69847cb0ff 85 Gene3D G3DSA:2.40.50.140 20 84 1.8E-26 T 14-10-2018 XF_1085 16a9060896362d34d0cd82e0052ae5ed 159 Gene3D G3DSA:3.40.50.1240 1 159 6.8E-38 T 14-10-2018 IPR029033 Histidine phosphatase superfamily XF_1085 16a9060896362d34d0cd82e0052ae5ed 159 SUPERFAMILY SSF53254 2 142 8.18E-27 T 14-10-2018 IPR029033 Histidine phosphatase superfamily XF_1085 16a9060896362d34d0cd82e0052ae5ed 159 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 93 1.1E-12 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XF_1085 16a9060896362d34d0cd82e0052ae5ed 159 SMART SM00855 4 115 2.1E-9 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XF_2430 8c30cea6e6d757e2c52defe9f5d1c17f 485 Gene3D G3DSA:3.20.20.70 1 484 6.5E-208 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_2430 8c30cea6e6d757e2c52defe9f5d1c17f 485 Pfam PF00571 CBS domain 148 202 1.0E-5 T 14-10-2018 IPR000644 CBS domain XF_2430 8c30cea6e6d757e2c52defe9f5d1c17f 485 Pfam PF00571 CBS domain 95 139 5.1E-11 T 14-10-2018 IPR000644 CBS domain XF_2430 8c30cea6e6d757e2c52defe9f5d1c17f 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 471 2.8E-156 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 XF_2430 8c30cea6e6d757e2c52defe9f5d1c17f 485 PIRSF PIRSF000130 1 485 8.9E-201 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 XF_2430 8c30cea6e6d757e2c52defe9f5d1c17f 485 SMART SM00116 96 143 2.5E-11 T 14-10-2018 IPR000644 CBS domain XF_2430 8c30cea6e6d757e2c52defe9f5d1c17f 485 SMART SM00116 157 205 4.1E-7 T 14-10-2018 IPR000644 CBS domain XF_2430 8c30cea6e6d757e2c52defe9f5d1c17f 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 XF_2430 8c30cea6e6d757e2c52defe9f5d1c17f 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 452 1.8E-186 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 XF_2430 8c30cea6e6d757e2c52defe9f5d1c17f 485 SUPERFAMILY SSF51412 2 475 2.49E-125 T 14-10-2018 XF_2430 8c30cea6e6d757e2c52defe9f5d1c17f 485 SMART SM01240 7 471 0.0 T 14-10-2018 XF_2430 8c30cea6e6d757e2c52defe9f5d1c17f 485 SUPERFAMILY SSF54631 94 202 1.89E-27 T 14-10-2018 XF_2430 8c30cea6e6d757e2c52defe9f5d1c17f 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 484 80.752 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 XF_2374 8d371036b28f1ba0971144e91e39fe25 215 Pfam PF00694 Aconitase C-terminal domain 1 131 4.2E-37 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 XF_2374 8d371036b28f1ba0971144e91e39fe25 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.469 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 XF_2374 8d371036b28f1ba0971144e91e39fe25 215 SUPERFAMILY SSF52016 1 203 3.92E-62 T 14-10-2018 XF_2374 8d371036b28f1ba0971144e91e39fe25 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.4E-85 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 XF_2374 8d371036b28f1ba0971144e91e39fe25 215 Gene3D G3DSA:3.20.19.10 1 184 1.4E-74 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 XF_1329 932e77e0c68eaf2ae35f6eb7ed85150e 234 Pfam PF04264 YceI-like domain 26 189 3.4E-33 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XF_1329 932e77e0c68eaf2ae35f6eb7ed85150e 234 SUPERFAMILY SSF101874 24 192 8.63E-44 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XF_1329 932e77e0c68eaf2ae35f6eb7ed85150e 234 Gene3D G3DSA:2.40.128.110 24 193 7.6E-41 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XF_1329 932e77e0c68eaf2ae35f6eb7ed85150e 234 SMART SM00867 25 190 4.2E-48 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XF_1182 f24d6a3c56fe80fbb36e00324ce9d6d0 350 Hamap MF_00790 Lipase chaperone [lifO]. 17 350 22.506 T 14-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 XF_1182 f24d6a3c56fe80fbb36e00324ce9d6d0 350 SUPERFAMILY SSF158855 76 349 1.83E-74 T 14-10-2018 XF_1182 f24d6a3c56fe80fbb36e00324ce9d6d0 350 Pfam PF03280 Proteobacterial lipase chaperone protein 149 340 1.3E-48 T 14-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 XF_1892 9835816493360505c27d4683b850aa08 254 Gene3D G3DSA:3.30.2170.10 21 249 1.8E-73 T 14-10-2018 XF_1892 9835816493360505c27d4683b850aa08 254 Hamap MF_00801 Endonuclease V [nfi]. 31 246 34.151 T 14-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 XF_1892 9835816493360505c27d4683b850aa08 254 Pfam PF04493 Endonuclease V 41 237 2.1E-68 T 14-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 XF_0393 e7779b3f90ad33afb972c8b02c01f109 190 SUPERFAMILY SSF55811 6 151 6.63E-29 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XF_0393 e7779b3f90ad33afb972c8b02c01f109 190 Pfam PF00293 NUDIX domain 7 130 4.8E-22 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XF_0393 e7779b3f90ad33afb972c8b02c01f109 190 Gene3D G3DSA:3.90.79.10 1 159 6.3E-41 T 14-10-2018 XF_0393 e7779b3f90ad33afb972c8b02c01f109 190 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XF_0393 e7779b3f90ad33afb972c8b02c01f109 190 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 35.321 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH XF_0761 e332b8f1810fb685f793bfae31d4fd1f 305 Pfam PF07920 Protein of unknown function (DUF1684) 160 296 1.6E-41 T 14-10-2018 IPR012467 Protein of unknown function DUF1684 XF_1293 f34457ae7c8c9a19e669744414e6339d 231 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 227 2.0E-59 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XF_1293 f34457ae7c8c9a19e669744414e6339d 231 Gene3D G3DSA:3.90.550.10 3 231 9.4E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_1293 f34457ae7c8c9a19e669744414e6339d 231 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 103 110 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XF_1293 f34457ae7c8c9a19e669744414e6339d 231 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 227 39.903 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XF_1293 f34457ae7c8c9a19e669744414e6339d 231 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 226 2.5E-75 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XF_1293 f34457ae7c8c9a19e669744414e6339d 231 SUPERFAMILY SSF53448 5 226 1.44E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_1235 7625923e1050466fad091fc2bd320210 51 Pfam PF01555 DNA methylase 5 35 1.0E-5 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XF_1235 7625923e1050466fad091fc2bd320210 51 Gene3D G3DSA:3.40.50.150 3 44 7.4E-10 T 14-10-2018 XF_1235 7625923e1050466fad091fc2bd320210 51 SUPERFAMILY SSF53335 4 42 3.42E-10 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_1291 e2f322686757f76758189ae071d7727f 461 Gene3D G3DSA:3.30.390.10 32 157 7.5E-52 T 14-10-2018 IPR029017 Enolase-like, N-terminal XF_1291 e2f322686757f76758189ae071d7727f 461 SUPERFAMILY SSF51604 172 458 8.77E-122 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily XF_1291 e2f322686757f76758189ae071d7727f 461 SMART SM01193 35 165 3.0E-84 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XF_1291 e2f322686757f76758189ae071d7727f 461 PRINTS PR00148 Enolase signature 68 82 5.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XF_1291 e2f322686757f76758189ae071d7727f 461 PRINTS PR00148 Enolase signature 138 154 5.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XF_1291 e2f322686757f76758189ae071d7727f 461 PRINTS PR00148 Enolase signature 194 207 5.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XF_1291 e2f322686757f76758189ae071d7727f 461 PRINTS PR00148 Enolase signature 367 381 5.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XF_1291 e2f322686757f76758189ae071d7727f 461 PRINTS PR00148 Enolase signature 396 413 5.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XF_1291 e2f322686757f76758189ae071d7727f 461 PRINTS PR00148 Enolase signature 344 355 5.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XF_1291 e2f322686757f76758189ae071d7727f 461 PIRSF PIRSF001400 31 458 8.9E-181 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XF_1291 e2f322686757f76758189ae071d7727f 461 Gene3D G3DSA:3.20.20.120 159 461 4.9E-128 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily XF_1291 e2f322686757f76758189ae071d7727f 461 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 35 457 1.6E-197 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XF_1291 e2f322686757f76758189ae071d7727f 461 Pfam PF00113 Enolase, C-terminal TIM barrel domain 173 456 9.8E-128 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XF_1291 e2f322686757f76758189ae071d7727f 461 SMART SM01192 172 458 6.8E-211 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XF_1291 e2f322686757f76758189ae071d7727f 461 ProSitePatterns PS00164 Enolase signature. 367 380 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_1291 e2f322686757f76758189ae071d7727f 461 Pfam PF03952 Enolase, N-terminal domain 35 165 7.6E-55 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XF_1291 e2f322686757f76758189ae071d7727f 461 SUPERFAMILY SSF54826 35 167 5.74E-52 T 14-10-2018 XF_1291 e2f322686757f76758189ae071d7727f 461 Hamap MF_00318 Enolase [eno]. 33 444 43.579 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XF_a0059 b6eac10d3617e2012fb2d9fe0a8af54e 401 SUPERFAMILY SSF110849 55 145 1.34E-21 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily XF_a0059 b6eac10d3617e2012fb2d9fe0a8af54e 401 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 55 206 2.2E-36 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 XF_a0059 b6eac10d3617e2012fb2d9fe0a8af54e 401 Pfam PF02195 ParB-like nuclease domain 55 143 8.9E-21 T 14-10-2018 IPR003115 ParB/Sulfiredoxin XF_a0059 b6eac10d3617e2012fb2d9fe0a8af54e 401 SUPERFAMILY SSF109709 138 204 3.27E-13 T 14-10-2018 XF_a0059 b6eac10d3617e2012fb2d9fe0a8af54e 401 Gene3D G3DSA:3.90.1530.30 65 129 1.2E-23 T 14-10-2018 XF_a0059 b6eac10d3617e2012fb2d9fe0a8af54e 401 SMART SM00470 53 143 1.4E-27 T 14-10-2018 IPR003115 ParB/Sulfiredoxin XF_a0059 b6eac10d3617e2012fb2d9fe0a8af54e 401 Pfam PF08535 KorB domain 176 233 4.1E-5 T 14-10-2018 IPR013741 Repressor KorB domain XF_a0059 b6eac10d3617e2012fb2d9fe0a8af54e 401 Gene3D G3DSA:1.10.10.2830 130 244 4.3E-13 T 14-10-2018 XF_1808 947371380adcaf4d25785042dc0bc2b8 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 4.4E-32 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XF_1808 947371380adcaf4d25785042dc0bc2b8 107 PIRSF PIRSF004555 2 107 1.6E-36 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XF_1808 947371380adcaf4d25785042dc0bc2b8 107 SUPERFAMILY SSF82607 10 101 2.62E-31 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily XF_1808 947371380adcaf4d25785042dc0bc2b8 107 Pfam PF02575 YbaB/EbfC DNA-binding family 10 97 7.6E-33 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XF_1808 947371380adcaf4d25785042dc0bc2b8 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 96 22.167 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XF_1808 947371380adcaf4d25785042dc0bc2b8 107 Gene3D G3DSA:3.30.1310.10 1 107 8.9E-42 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily XF_2550 712deb9c4df84ed2e6500566a19cc4f3 597 Gene3D G3DSA:2.40.160.50 218 597 7.8E-93 T 14-10-2018 XF_2550 712deb9c4df84ed2e6500566a19cc4f3 597 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 249 561 7.1E-103 T 14-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal XF_2550 712deb9c4df84ed2e6500566a19cc4f3 597 PIRSF PIRSF029745 27 597 1.0E-145 T 14-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 XF_2550 712deb9c4df84ed2e6500566a19cc4f3 597 Pfam PF08479 POTRA domain, ShlB-type 106 185 6.3E-23 T 14-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type XF_2550 712deb9c4df84ed2e6500566a19cc4f3 597 Pfam PF17287 POTRA domain 187 240 2.0E-20 T 14-10-2018 IPR035251 ShlB, POTRA domain XF_1896 075547e2efc789bc4e8bfb8fec37173f 186 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 11 183 28.562 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 XF_1896 075547e2efc789bc4e8bfb8fec37173f 186 Gene3D G3DSA:3.30.1330.60 68 185 1.0E-34 T 14-10-2018 IPR036737 OmpA-like domain superfamily XF_1896 075547e2efc789bc4e8bfb8fec37173f 186 SUPERFAMILY SSF103088 64 182 1.83E-32 T 14-10-2018 IPR036737 OmpA-like domain superfamily XF_1896 075547e2efc789bc4e8bfb8fec37173f 186 PRINTS PR01021 OMPA domain signature 128 144 9.6E-14 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XF_1896 075547e2efc789bc4e8bfb8fec37173f 186 PRINTS PR01021 OMPA domain signature 83 105 9.6E-14 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XF_1896 075547e2efc789bc4e8bfb8fec37173f 186 PRINTS PR01021 OMPA domain signature 113 128 9.6E-14 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XF_1896 075547e2efc789bc4e8bfb8fec37173f 186 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 81 183 2.2E-42 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 XF_1896 075547e2efc789bc4e8bfb8fec37173f 186 Pfam PF00691 OmpA family 82 177 1.5E-16 T 14-10-2018 IPR006665 OmpA-like domain XF_2528 7b39ab98c0721accccd0a6a663a884c1 472 Gene3D G3DSA:3.40.50.300 243 469 8.8E-17 T 14-10-2018 XF_2528 7b39ab98c0721accccd0a6a663a884c1 472 SUPERFAMILY SSF52540 2 202 2.13E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2528 7b39ab98c0721accccd0a6a663a884c1 472 Gene3D G3DSA:3.40.50.10810 4 225 3.2E-23 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily XF_2528 7b39ab98c0721accccd0a6a663a884c1 472 SUPERFAMILY SSF52540 117 454 4.06E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2528 7b39ab98c0721accccd0a6a663a884c1 472 SMART SM00487 2 188 5.8E-7 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_2528 7b39ab98c0721accccd0a6a663a884c1 472 Pfam PF00176 SNF2 family N-terminal domain 25 265 4.7E-16 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 XF_2301 99aa41984db259d24809027714212877 303 Hamap MF_02040 Iron-sulfur cluster carrier protein. 34 285 36.983 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein XF_2301 99aa41984db259d24809027714212877 303 SUPERFAMILY SSF52540 35 269 2.85E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2301 99aa41984db259d24809027714212877 303 ProSitePatterns PS01215 Mrp family signature. 148 164 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 XF_2301 99aa41984db259d24809027714212877 303 Gene3D G3DSA:3.40.50.300 35 283 3.2E-82 T 14-10-2018 XF_2301 99aa41984db259d24809027714212877 303 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 42 282 3.8E-100 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 XF_0340 c09967578f73f4f6dacbaea355d09ba6 173 Pfam PF02600 Disulfide bond formation protein DsbB 9 160 2.6E-37 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 XF_0340 c09967578f73f4f6dacbaea355d09ba6 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 4 168 21.101 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB XF_0340 c09967578f73f4f6dacbaea355d09ba6 173 SUPERFAMILY SSF158442 13 160 3.01E-38 T 14-10-2018 IPR023380 DsbB-like superfamily XF_0340 c09967578f73f4f6dacbaea355d09ba6 173 Gene3D G3DSA:1.20.1550.10 4 173 9.4E-45 T 14-10-2018 IPR023380 DsbB-like superfamily XF_0986 091cb497a5a22a4d24a738019b96fbb0 594 SUPERFAMILY SSF55073 438 591 6.75E-43 T 14-10-2018 IPR029787 Nucleotide cyclase XF_0986 091cb497a5a22a4d24a738019b96fbb0 594 SMART SM00267 422 593 2.5E-50 T 14-10-2018 IPR000160 GGDEF domain XF_0986 091cb497a5a22a4d24a738019b96fbb0 594 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 433 591 1.7E-42 T 14-10-2018 IPR000160 GGDEF domain XF_0986 091cb497a5a22a4d24a738019b96fbb0 594 Gene3D G3DSA:3.30.70.270 427 593 1.8E-51 T 14-10-2018 XF_0986 091cb497a5a22a4d24a738019b96fbb0 594 Pfam PF00990 Diguanylate cyclase, GGDEF domain 433 589 7.3E-39 T 14-10-2018 IPR000160 GGDEF domain XF_0986 091cb497a5a22a4d24a738019b96fbb0 594 Pfam PF07695 7TM diverse intracellular signalling 211 417 4.6E-22 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 XF_0986 091cb497a5a22a4d24a738019b96fbb0 594 Pfam PF07696 7TMR-DISM extracellular 2 105 197 5.4E-6 T 14-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 XF_0720 d88630e1e1ae020f0f1e95d1d2e92315 91 SMART SM00530 13 66 2.1E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_0720 d88630e1e1ae020f0f1e95d1d2e92315 91 SUPERFAMILY SSF47413 9 88 9.39E-22 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_0720 d88630e1e1ae020f0f1e95d1d2e92315 91 Pfam PF01381 Helix-turn-helix 15 64 3.3E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_0720 d88630e1e1ae020f0f1e95d1d2e92315 91 Gene3D G3DSA:1.10.260.40 1 90 1.7E-28 T 14-10-2018 XF_0720 d88630e1e1ae020f0f1e95d1d2e92315 91 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 4 80 5.5E-29 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 XF_a0055 1ca9587b8f377a191883b0a3094224e0 282 Pfam PF13708 Domain of unknown function (DUF4942) 83 275 1.4E-64 T 14-10-2018 IPR031339 Domain of unknown function DUF4942 XF_0611 38d74b25079642babf1abaff53679fa4 329 Gene3D G3DSA:3.40.50.720 22 312 1.2E-107 T 14-10-2018 XF_0611 38d74b25079642babf1abaff53679fa4 329 SUPERFAMILY SSF51735 15 328 2.18E-91 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0611 38d74b25079642babf1abaff53679fa4 329 Pfam PF16363 GDP-mannose 4,6 dehydratase 24 321 1.9E-53 T 14-10-2018 IPR016040 NAD(P)-binding domain XF_0611 38d74b25079642babf1abaff53679fa4 329 Gene3D G3DSA:3.90.25.10 202 325 1.2E-107 T 14-10-2018 XF_0774 1a0ce1aa4fc31d5930e950b5998ba806 98 SUPERFAMILY SSF54637 5 93 2.64E-11 T 14-10-2018 IPR029069 HotDog domain superfamily XF_0774 1a0ce1aa4fc31d5930e950b5998ba806 98 Gene3D G3DSA:3.10.129.10 2 96 5.3E-14 T 14-10-2018 XF_0053 31270be9bc937b16c8b4513ec5b7a1d1 397 Gene3D G3DSA:3.40.50.80 260 394 3.7E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XF_0053 31270be9bc937b16c8b4513ec5b7a1d1 397 SUPERFAMILY SSF63380 152 256 9.02E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XF_0053 31270be9bc937b16c8b4513ec5b7a1d1 397 SUPERFAMILY SSF46458 5 139 2.0E-35 T 14-10-2018 IPR009050 Globin-like superfamily XF_0053 31270be9bc937b16c8b4513ec5b7a1d1 397 PRINTS PR00409 Phthalate dioxygenase reductase family signature 266 285 6.2E-11 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 XF_0053 31270be9bc937b16c8b4513ec5b7a1d1 397 PRINTS PR00409 Phthalate dioxygenase reductase family signature 229 243 6.2E-11 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 XF_0053 31270be9bc937b16c8b4513ec5b7a1d1 397 PRINTS PR00409 Phthalate dioxygenase reductase family signature 181 191 6.2E-11 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 XF_0053 31270be9bc937b16c8b4513ec5b7a1d1 397 Hamap MF_01252 Flavohemoprotein [hmp]. 4 394 51.46 T 14-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 XF_0053 31270be9bc937b16c8b4513ec5b7a1d1 397 Pfam PF00175 Oxidoreductase NAD-binding domain 267 368 1.6E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 XF_0053 31270be9bc937b16c8b4513ec5b7a1d1 397 Pfam PF00970 Oxidoreductase FAD-binding domain 162 255 9.0E-5 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 XF_0053 31270be9bc937b16c8b4513ec5b7a1d1 397 SUPERFAMILY SSF52343 262 391 4.32E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XF_0053 31270be9bc937b16c8b4513ec5b7a1d1 397 Pfam PF00042 Globin 10 105 4.5E-8 T 14-10-2018 IPR000971 Globin GO:0020037 XF_0053 31270be9bc937b16c8b4513ec5b7a1d1 397 Gene3D G3DSA:1.10.490.10 5 145 1.3E-47 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 XF_0053 31270be9bc937b16c8b4513ec5b7a1d1 397 Gene3D G3DSA:2.40.30.10 154 256 5.7E-29 T 14-10-2018 XF_2672 c2f13b0ee30a2bf5989260e2f1f40ccf 167 PIRSF PIRSF001338 5 167 1.0E-64 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 XF_2672 c2f13b0ee30a2bf5989260e2f1f40ccf 167 SMART SM01001 8 159 1.0E-91 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 XF_2672 c2f13b0ee30a2bf5989260e2f1f40ccf 167 Gene3D G3DSA:3.40.50.7700 2 166 1.6E-68 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 XF_2672 c2f13b0ee30a2bf5989260e2f1f40ccf 167 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 164 3.1E-62 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 XF_2672 c2f13b0ee30a2bf5989260e2f1f40ccf 167 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 31.908 T 14-10-2018 IPR033747 Class I PurE XF_2672 c2f13b0ee30a2bf5989260e2f1f40ccf 167 SUPERFAMILY SSF52255 7 165 3.4E-64 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 XF_2672 c2f13b0ee30a2bf5989260e2f1f40ccf 167 Pfam PF00731 AIR carboxylase 10 157 1.4E-60 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 XF_0983 95407066bcce6d6984ef5c191da4832c 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 2 13 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XF_0983 95407066bcce6d6984ef5c191da4832c 87 Pfam PF00037 4Fe-4S binding domain 1 18 1.3E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XF_0983 95407066bcce6d6984ef5c191da4832c 87 SUPERFAMILY SSF54862 1 60 1.06E-17 T 14-10-2018 XF_0983 95407066bcce6d6984ef5c191da4832c 87 Gene3D G3DSA:3.30.70.20 1 74 4.9E-29 T 14-10-2018 XF_2281 44e2dc8a1b959f97216c14cbe6a699a9 310 Gene3D G3DSA:3.90.1530.30 57 120 7.2E-27 T 14-10-2018 XF_2281 44e2dc8a1b959f97216c14cbe6a699a9 310 SUPERFAMILY SSF110849 44 178 4.45E-32 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily XF_2281 44e2dc8a1b959f97216c14cbe6a699a9 310 Gene3D G3DSA:1.10.10.2830 121 233 1.1E-34 T 14-10-2018 XF_2281 44e2dc8a1b959f97216c14cbe6a699a9 310 SMART SM00470 44 134 1.4E-36 T 14-10-2018 IPR003115 ParB/Sulfiredoxin XF_2281 44e2dc8a1b959f97216c14cbe6a699a9 310 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 42 217 2.7E-57 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 XF_2281 44e2dc8a1b959f97216c14cbe6a699a9 310 Pfam PF02195 ParB-like nuclease domain 47 134 2.7E-28 T 14-10-2018 IPR003115 ParB/Sulfiredoxin XF_1722 257d68fe77b661d558866280116b9920 130 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.1E-24 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1722 257d68fe77b661d558866280116b9920 130 Gene3D G3DSA:1.10.10.10 1 80 9.1E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1722 257d68fe77b661d558866280116b9920 130 Gene3D G3DSA:3.40.190.10 81 130 2.7E-5 T 14-10-2018 XF_1722 257d68fe77b661d558866280116b9920 130 SUPERFAMILY SSF46785 1 84 3.85E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_1722 257d68fe77b661d558866280116b9920 130 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.9E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1722 257d68fe77b661d558866280116b9920 130 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.9E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1722 257d68fe77b661d558866280116b9920 130 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.9E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 PIRSF PIRSF000114 1 335 4.6E-94 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 160 9.2E-49 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 1.8E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 1.8E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 1.8E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 1.8E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 1.8E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 1.8E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 Gene3D G3DSA:1.10.1040.10 192 340 1.7E-46 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 Gene3D G3DSA:3.40.50.720 1 190 1.5E-52 T 14-10-2018 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 320 1.5E-46 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 SUPERFAMILY SSF48179 182 337 5.1E-51 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 325 38.364 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XF_1802 b853a0efba2c461102804cbf4bcbb3f1 346 SUPERFAMILY SSF51735 7 181 5.35E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_a0039 232487fe26446f9875a671b8e0a6475b 259 SUPERFAMILY SSF101082 33 228 9.42E-32 T 14-10-2018 XF_a0039 232487fe26446f9875a671b8e0a6475b 259 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 16 259 4.4E-49 T 14-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ XF_1173 b1da1399302f9ec94ae3784ddc8ce0e7 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1173 b1da1399302f9ec94ae3784ddc8ce0e7 118 PIRSF PIRSF002134 1 118 6.0E-40 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1173 b1da1399302f9ec94ae3784ddc8ce0e7 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 8.3E-49 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1173 b1da1399302f9ec94ae3784ddc8ce0e7 118 Pfam PF00416 Ribosomal protein S13/S18 62 108 1.8E-17 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1173 b1da1399302f9ec94ae3784ddc8ce0e7 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.852 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1173 b1da1399302f9ec94ae3784ddc8ce0e7 118 Gene3D G3DSA:4.10.910.10 72 118 2.6E-25 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1173 b1da1399302f9ec94ae3784ddc8ce0e7 118 SUPERFAMILY SSF46946 2 114 7.06E-42 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 XF_1173 b1da1399302f9ec94ae3784ddc8ce0e7 118 Gene3D G3DSA:1.10.8.50 1 71 4.8E-25 T 14-10-2018 XF_0389 2da83a69f250e0580df40d1afd5853b9 227 Gene3D G3DSA:1.10.10.10 123 227 1.0E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_0389 2da83a69f250e0580df40d1afd5853b9 227 SMART SM00862 145 220 3.4E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XF_0389 2da83a69f250e0580df40d1afd5853b9 227 Pfam PF00072 Response regulator receiver domain 3 113 2.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_0389 2da83a69f250e0580df40d1afd5853b9 227 SMART SM00448 1 112 3.2E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_0389 2da83a69f250e0580df40d1afd5853b9 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 4.3E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XF_0389 2da83a69f250e0580df40d1afd5853b9 227 Gene3D G3DSA:3.40.50.2300 1 121 6.4E-40 T 14-10-2018 XF_0389 2da83a69f250e0580df40d1afd5853b9 227 SUPERFAMILY SSF52172 1 169 2.11E-38 T 14-10-2018 IPR011006 CheY-like superfamily XF_1379 4c5790b44c970d7d35e41db01e58cdca 321 Pfam PF00296 Luciferase-like monooxygenase 35 255 3.4E-38 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 XF_1379 4c5790b44c970d7d35e41db01e58cdca 321 Gene3D G3DSA:3.20.20.30 17 319 4.7E-68 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 XF_1379 4c5790b44c970d7d35e41db01e58cdca 321 SUPERFAMILY SSF51679 30 317 2.22E-63 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 XF_0533 700913454c026681a4b953668fd6daad 95 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 8 86 1.7E-27 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system XF_0533 700913454c026681a4b953668fd6daad 95 Gene3D G3DSA:3.10.450.530 2 89 1.8E-18 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily XF_0441 759a0fe3e69a0759f040f84574615cb4 156 Pfam PF13673 Acetyltransferase (GNAT) domain 42 135 1.7E-11 T 14-10-2018 IPR000182 GNAT domain XF_0441 759a0fe3e69a0759f040f84574615cb4 156 SUPERFAMILY SSF55729 11 152 1.06E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase XF_0441 759a0fe3e69a0759f040f84574615cb4 156 Gene3D G3DSA:3.40.630.30 13 156 9.0E-38 T 14-10-2018 XF_0441 759a0fe3e69a0759f040f84574615cb4 156 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 20 151 3.9E-50 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 XF_1588 3555d5956879fdddead0a56c011ea11d 109 SUPERFAMILY SSF89447 13 55 4.81E-10 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily XF_1588 3555d5956879fdddead0a56c011ea11d 109 SMART SM00966 16 56 4.7E-5 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XF_1588 3555d5956879fdddead0a56c011ea11d 109 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 16 53 4.5E-8 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XF_1588 3555d5956879fdddead0a56c011ea11d 109 Gene3D G3DSA:2.10.260.10 10 81 7.4E-15 T 14-10-2018 XF_2445 6956857aedba0fe8c885908d9284441b 1056 SUPERFAMILY SSF49785 163 306 5.56E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily XF_2445 6956857aedba0fe8c885908d9284441b 1056 Pfam PF00754 F5/8 type C domain 202 301 4.9E-15 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain XF_2445 6956857aedba0fe8c885908d9284441b 1056 Gene3D G3DSA:2.60.120.430 19 179 2.9E-12 T 14-10-2018 XF_2445 6956857aedba0fe8c885908d9284441b 1056 SUPERFAMILY SSF48208 563 988 8.51E-43 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 XF_2445 6956857aedba0fe8c885908d9284441b 1056 Gene3D G3DSA:2.60.120.260 183 308 1.7E-16 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily XF_2445 6956857aedba0fe8c885908d9284441b 1056 SUPERFAMILY SSF49785 26 177 6.09E-20 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily XF_2445 6956857aedba0fe8c885908d9284441b 1056 Pfam PF06202 Amylo-alpha-1,6-glucosidase 605 711 3.4E-5 T 14-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 XF_2445 6956857aedba0fe8c885908d9284441b 1056 Gene3D G3DSA:1.50.10.10 621 933 4.1E-20 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 XF_1558 d28450ac7999dd60f7a68eb60a5af4b4 79 Gene3D G3DSA:2.40.50.140 1 69 1.6E-8 T 14-10-2018 XF_1558 d28450ac7999dd60f7a68eb60a5af4b4 79 SUPERFAMILY SSF50249 8 79 2.26E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1558 d28450ac7999dd60f7a68eb60a5af4b4 79 Pfam PF00436 Single-strand binding protein family 8 39 2.1E-7 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XF_1912 c8dd202a47cb5177cf0cefbdd43267d9 204 Gene3D G3DSA:3.30.40.60 93 181 5.1E-22 T 14-10-2018 XF_1912 c8dd202a47cb5177cf0cefbdd43267d9 204 SMART SM00507 96 149 6.8E-13 T 14-10-2018 IPR003615 HNH nuclease XF_1912 c8dd202a47cb5177cf0cefbdd43267d9 204 Pfam PF14279 HNH endonuclease 109 163 2.2E-15 T 14-10-2018 IPR029471 HNH endonuclease 5 XF_2195 e652175355b75a452ddff4075d28912b 135 Gene3D G3DSA:1.10.3510.10 7 134 4.0E-13 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_2195 e652175355b75a452ddff4075d28912b 135 Pfam PF04591 Protein of unknown function, DUF596 64 126 3.8E-21 T 14-10-2018 IPR007670 Protein of unknown function DUF596 XF_2195 e652175355b75a452ddff4075d28912b 135 SUPERFAMILY SSF160472 3 127 1.02E-38 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_0232 77e53e619fbcf8b0456e5c30b9f3a875 502 Gene3D G3DSA:3.40.50.10490 90 267 2.3E-159 T 14-10-2018 XF_0232 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 132 151 5.1E-45 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0232 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 237 255 5.1E-45 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0232 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 422 440 5.1E-45 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0232 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 440 454 5.1E-45 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0232 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 314 335 5.1E-45 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0232 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 454 467 5.1E-45 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0232 77e53e619fbcf8b0456e5c30b9f3a875 502 Pfam PF00342 Phosphoglucose isomerase 45 495 9.2E-140 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0232 77e53e619fbcf8b0456e5c30b9f3a875 502 Gene3D G3DSA:3.40.50.10490 6 463 2.3E-159 T 14-10-2018 XF_0232 77e53e619fbcf8b0456e5c30b9f3a875 502 SUPERFAMILY SSF53697 5 486 2.14E-148 T 14-10-2018 XF_0232 77e53e619fbcf8b0456e5c30b9f3a875 502 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 38 481 36.509 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0232 77e53e619fbcf8b0456e5c30b9f3a875 502 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 241 254 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0232 77e53e619fbcf8b0456e5c30b9f3a875 502 Gene3D G3DSA:1.10.1390.10 464 502 2.9E-11 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_0232 77e53e619fbcf8b0456e5c30b9f3a875 502 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 454 471 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XF_1714 dcd13b451048cc599c9ba956ae2e7d31 180 SUPERFAMILY SSF64397 4 174 6.93E-35 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 XF_1714 dcd13b451048cc599c9ba956ae2e7d31 180 Gene3D G3DSA:3.55.30.10 1 179 1.3E-40 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 XF_1714 dcd13b451048cc599c9ba956ae2e7d31 180 Pfam PF01430 Hsp33 protein 5 175 2.5E-32 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 XF_1913 93d4a201a55836fc57b03e0464cf8b04 268 Gene3D G3DSA:3.20.20.140 1 265 1.9E-93 T 14-10-2018 XF_1913 93d4a201a55836fc57b03e0464cf8b04 268 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XF_1913 93d4a201a55836fc57b03e0464cf8b04 268 PIRSF PIRSF005902 1 264 2.7E-71 T 14-10-2018 IPR001130 TatD family GO:0016788 XF_1913 93d4a201a55836fc57b03e0464cf8b04 268 SUPERFAMILY SSF51556 3 261 3.53E-80 T 14-10-2018 IPR032466 Metal-dependent hydrolase XF_1913 93d4a201a55836fc57b03e0464cf8b04 268 Pfam PF01026 TatD related DNase 4 260 1.0E-67 T 14-10-2018 IPR001130 TatD family GO:0016788 XF_2383 bde6dc87022a8c4c71676c84f383c707 275 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 15 123 1.4E-42 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XF_2383 bde6dc87022a8c4c71676c84f383c707 275 Pfam PF14489 QueF-like protein 187 263 1.3E-27 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XF_2383 bde6dc87022a8c4c71676c84f383c707 275 Gene3D G3DSA:3.30.1130.10 15 127 2.3E-39 T 14-10-2018 XF_2383 bde6dc87022a8c4c71676c84f383c707 275 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 275 128.003 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XF_2383 bde6dc87022a8c4c71676c84f383c707 275 SUPERFAMILY SSF55620 174 263 9.64E-11 T 14-10-2018 XF_2383 bde6dc87022a8c4c71676c84f383c707 275 PIRSF PIRSF004750 1 275 1.2E-102 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XF_2383 bde6dc87022a8c4c71676c84f383c707 275 TIGRFAM TIGR03138 QueF: queuine synthase 4 275 3.5E-103 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XF_2383 bde6dc87022a8c4c71676c84f383c707 275 Gene3D G3DSA:3.30.1130.10 133 275 5.3E-48 T 14-10-2018 XF_0304 0da80406e93213792ecbdb1aa10a10ec 132 Pfam PF03840 Preprotein translocase SecG subunit 3 70 2.2E-20 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XF_0304 0da80406e93213792ecbdb1aa10a10ec 132 PRINTS PR01651 Protein-export SecG membrane protein signature 2 22 3.8E-34 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XF_0304 0da80406e93213792ecbdb1aa10a10ec 132 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 3.8E-34 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XF_0304 0da80406e93213792ecbdb1aa10a10ec 132 PRINTS PR01651 Protein-export SecG membrane protein signature 37 53 3.8E-34 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XF_0304 0da80406e93213792ecbdb1aa10a10ec 132 PRINTS PR01651 Protein-export SecG membrane protein signature 22 36 3.8E-34 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XF_0304 0da80406e93213792ecbdb1aa10a10ec 132 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 71 7.8E-24 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XF_1590 d816af9f3a34c6c822137a4fd141bb2b 86 Gene3D G3DSA:1.10.1220.10 12 61 1.6E-22 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XF_1590 d816af9f3a34c6c822137a4fd141bb2b 86 SUPERFAMILY SSF47598 4 71 2.04E-20 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XF_2201 3b86625b425578f012533be4af472c46 325 PIRSF PIRSF000401 20 325 5.5E-76 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 XF_2201 3b86625b425578f012533be4af472c46 325 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 22 323 29.576 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 XF_2201 3b86625b425578f012533be4af472c46 325 SUPERFAMILY SSF53335 102 301 4.26E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_2201 3b86625b425578f012533be4af472c46 325 Gene3D G3DSA:3.40.50.150 125 324 5.5E-47 T 14-10-2018 XF_2201 3b86625b425578f012533be4af472c46 325 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 23 316 1.4E-61 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 XF_2201 3b86625b425578f012533be4af472c46 325 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 22 323 3.2E-89 T 14-10-2018 XF_2272 56e2d56e5556c1c7560592b3782aaa05 758 SUPERFAMILY SSF51726 5 393 6.54E-112 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XF_2272 56e2d56e5556c1c7560592b3782aaa05 758 SUPERFAMILY SSF51726 396 757 1.7E-121 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XF_2272 56e2d56e5556c1c7560592b3782aaa05 758 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 758 37.715 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XF_2272 56e2d56e5556c1c7560592b3782aaa05 758 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XF_2272 56e2d56e5556c1c7560592b3782aaa05 758 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 310 1.4E-120 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XF_2272 56e2d56e5556c1c7560592b3782aaa05 758 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 758 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XF_2272 56e2d56e5556c1c7560592b3782aaa05 758 PIRSF PIRSF000382 1 758 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XF_2272 56e2d56e5556c1c7560592b3782aaa05 758 Gene3D G3DSA:3.20.20.210 6 524 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XF_2272 56e2d56e5556c1c7560592b3782aaa05 758 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 432 753 6.9E-156 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XF_2303 dcff8e62fad566c6e11bd39210eacdf1 188 SUPERFAMILY SSF53098 93 162 8.19E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily XF_2303 dcff8e62fad566c6e11bd39210eacdf1 188 Pfam PF13610 DDE domain 95 176 8.5E-29 T 14-10-2018 IPR032874 DDE domain XF_2303 dcff8e62fad566c6e11bd39210eacdf1 188 Gene3D G3DSA:3.30.420.10 89 170 1.5E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XF_0842 b7254ae1e8b89646a351828de32e58cc 790 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 42 766 1.0E-194 T 14-10-2018 IPR005887 Alpha-1,2-mannosidase, putative XF_0842 b7254ae1e8b89646a351828de32e58cc 790 Gene3D G3DSA:2.70.98.10 49 385 4.6E-238 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 XF_0842 b7254ae1e8b89646a351828de32e58cc 790 Gene3D G3DSA:3.30.2080.10 332 766 4.6E-238 T 14-10-2018 XF_0842 b7254ae1e8b89646a351828de32e58cc 790 Gene3D G3DSA:1.20.1050.60 386 475 4.6E-238 T 14-10-2018 XF_0842 b7254ae1e8b89646a351828de32e58cc 790 SUPERFAMILY SSF48208 299 760 5.78E-25 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 XF_0842 b7254ae1e8b89646a351828de32e58cc 790 Gene3D G3DSA:1.20.1610.10 476 638 4.6E-238 T 14-10-2018 XF_0842 b7254ae1e8b89646a351828de32e58cc 790 Pfam PF07971 Glycosyl hydrolase family 92 274 762 9.7E-163 T 14-10-2018 IPR012939 Glycosyl hydrolase family 92 XF_1149 fe086dde420220edd17f8e89b0ac6913 265 PRINTS PR00123 ATP synthase A subunit signature 245 260 1.1E-12 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1149 fe086dde420220edd17f8e89b0ac6913 265 PRINTS PR00123 ATP synthase A subunit signature 95 111 1.1E-12 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1149 fe086dde420220edd17f8e89b0ac6913 265 PRINTS PR00123 ATP synthase A subunit signature 192 214 1.1E-12 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1149 fe086dde420220edd17f8e89b0ac6913 265 Pfam PF00119 ATP synthase A chain 38 259 2.6E-54 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1149 fe086dde420220edd17f8e89b0ac6913 265 SUPERFAMILY SSF81336 88 259 3.79E-39 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1149 fe086dde420220edd17f8e89b0ac6913 265 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 26 259 6.8E-43 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1149 fe086dde420220edd17f8e89b0ac6913 265 ProSitePatterns PS00449 ATP synthase a subunit signature. 195 204 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1149 fe086dde420220edd17f8e89b0ac6913 265 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 265 14.966 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1149 fe086dde420220edd17f8e89b0ac6913 265 Gene3D G3DSA:1.20.120.220 86 265 3.5E-51 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_2342 d0cb8373799e307bd1aad5dda8056010 367 Pfam PF01628 HrcA protein C terminal domain 128 347 4.7E-57 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 XF_2342 d0cb8373799e307bd1aad5dda8056010 367 Gene3D G3DSA:1.10.10.10 16 108 1.1E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_2342 d0cb8373799e307bd1aad5dda8056010 367 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 26 354 29.087 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 XF_2342 d0cb8373799e307bd1aad5dda8056010 367 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 28 360 2.4E-103 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 XF_2342 d0cb8373799e307bd1aad5dda8056010 367 Gene3D G3DSA:3.30.390.60 151 252 7.2E-41 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily XF_2342 d0cb8373799e307bd1aad5dda8056010 367 SUPERFAMILY SSF55781 96 362 4.81E-63 T 14-10-2018 XF_2342 d0cb8373799e307bd1aad5dda8056010 367 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 28 98 2.3E-7 T 14-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 XF_2342 d0cb8373799e307bd1aad5dda8056010 367 SUPERFAMILY SSF46785 27 108 3.18E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_2342 d0cb8373799e307bd1aad5dda8056010 367 Gene3D G3DSA:3.30.450.40 129 357 7.2E-41 T 14-10-2018 IPR029016 GAF-like domain superfamily XF_2342 d0cb8373799e307bd1aad5dda8056010 367 PIRSF PIRSF005485 24 364 1.7E-110 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 XF_0810 1861f2b5ef3e0ccf6d939a45a5d7c299 565 Gene3D G3DSA:2.60.40.760 466 559 7.9E-31 T 14-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily XF_0810 1861f2b5ef3e0ccf6d939a45a5d7c299 565 SUPERFAMILY SSF49590 469 540 9.68E-12 T 14-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily XF_0810 1861f2b5ef3e0ccf6d939a45a5d7c299 565 SUPERFAMILY SSF50685 362 470 1.36E-16 T 14-10-2018 IPR036908 RlpA-like domain superfamily XF_0810 1861f2b5ef3e0ccf6d939a45a5d7c299 565 Pfam PF03330 Lytic transglycolase 409 460 2.9E-7 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain XF_0810 1861f2b5ef3e0ccf6d939a45a5d7c299 565 Gene3D G3DSA:2.40.40.10 359 465 3.7E-23 T 14-10-2018 IPR036908 RlpA-like domain superfamily XF_0810 1861f2b5ef3e0ccf6d939a45a5d7c299 565 SUPERFAMILY SSF51445 12 325 2.26E-39 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily XF_0810 1861f2b5ef3e0ccf6d939a45a5d7c299 565 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 23 240 2.0E-15 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 XF_0810 1861f2b5ef3e0ccf6d939a45a5d7c299 565 Gene3D G3DSA:3.20.20.80 8 322 7.5E-46 T 14-10-2018 XF_2605 8e8dd78108e24c0fdb737b81f25a8998 137 SUPERFAMILY SSF74653 35 116 6.54E-20 T 14-10-2018 XF_2605 8e8dd78108e24c0fdb737b81f25a8998 137 Gene3D G3DSA:3.30.1150.10 19 117 1.6E-22 T 14-10-2018 XF_2605 8e8dd78108e24c0fdb737b81f25a8998 137 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 42 118 7.2E-21 T 14-10-2018 IPR006260 TonB/TolA, C-terminal XF_2605 8e8dd78108e24c0fdb737b81f25a8998 137 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 40 117 4.6E-20 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 XF_0164 d21dc6e7b15db1e61166a26adc8f96e3 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 263 7.1E-69 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 XF_0164 d21dc6e7b15db1e61166a26adc8f96e3 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 257 1.9E-14 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase XF_0164 d21dc6e7b15db1e61166a26adc8f96e3 266 SUPERFAMILY SSF56219 1 264 9.16E-72 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XF_0164 d21dc6e7b15db1e61166a26adc8f96e3 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 263 3.9E-62 T 14-10-2018 XF_0164 d21dc6e7b15db1e61166a26adc8f96e3 266 Gene3D G3DSA:3.60.10.10 1 265 3.6E-77 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XF_1849 3c2a7205cce04e7a9fd8a65b404b9b8a 351 Gene3D G3DSA:1.10.287.130 127 185 4.6E-11 T 14-10-2018 XF_1849 3c2a7205cce04e7a9fd8a65b404b9b8a 351 SMART SM00387 228 341 9.6E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_1849 3c2a7205cce04e7a9fd8a65b404b9b8a 351 SMART SM00388 122 189 9.1E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_1849 3c2a7205cce04e7a9fd8a65b404b9b8a 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 228 338 7.2E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_1849 3c2a7205cce04e7a9fd8a65b404b9b8a 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 320 8.8E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1849 3c2a7205cce04e7a9fd8a65b404b9b8a 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 338 8.8E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1849 3c2a7205cce04e7a9fd8a65b404b9b8a 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 273 287 8.8E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_1849 3c2a7205cce04e7a9fd8a65b404b9b8a 351 SUPERFAMILY SSF47384 112 183 7.06E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XF_1849 3c2a7205cce04e7a9fd8a65b404b9b8a 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 123 181 4.5E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_1849 3c2a7205cce04e7a9fd8a65b404b9b8a 351 Gene3D G3DSA:3.30.565.10 187 339 1.2E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_1849 3c2a7205cce04e7a9fd8a65b404b9b8a 351 SUPERFAMILY SSF55874 192 338 1.57E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_1368 bf01a5b409a2875813c2c8894222de12 312 Pfam PF05175 Methyltransferase small domain 134 217 2.4E-13 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 XF_1368 bf01a5b409a2875813c2c8894222de12 312 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XF_1368 bf01a5b409a2875813c2c8894222de12 312 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 48.108 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 XF_1368 bf01a5b409a2875813c2c8894222de12 312 Gene3D G3DSA:3.40.50.150 109 287 2.4E-38 T 14-10-2018 XF_1368 bf01a5b409a2875813c2c8894222de12 312 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 294 4.2E-114 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 XF_1368 bf01a5b409a2875813c2c8894222de12 312 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 295 5.2E-67 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 XF_1368 bf01a5b409a2875813c2c8894222de12 312 SUPERFAMILY SSF53335 16 293 1.1E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_1368 bf01a5b409a2875813c2c8894222de12 312 Gene3D G3DSA:1.10.8.10 15 105 3.1E-8 T 14-10-2018 XF_1368 bf01a5b409a2875813c2c8894222de12 312 PIRSF PIRSF037167 2 307 1.5E-122 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 XF_0450 064ea324b63e0652837d692d41c7ddfe 132 Gene3D G3DSA:3.40.50.12740 5 132 1.3E-41 T 14-10-2018 XF_0450 064ea324b63e0652837d692d41c7ddfe 132 Pfam PF00072 Response regulator receiver domain 8 118 8.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_0450 064ea324b63e0652837d692d41c7ddfe 132 SMART SM00448 6 119 3.9E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_0450 064ea324b63e0652837d692d41c7ddfe 132 SUPERFAMILY SSF52172 5 125 8.82E-38 T 14-10-2018 IPR011006 CheY-like superfamily XF_0119 a315b949d4f8987fd95640186c326d18 342 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 217 256 1.1E-4 T 14-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 XF_0119 a315b949d4f8987fd95640186c326d18 342 SUPERFAMILY SSF51126 36 324 2.84E-27 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor XF_0119 a315b949d4f8987fd95640186c326d18 342 Gene3D G3DSA:2.160.20.10 37 328 3.4E-26 T 14-10-2018 IPR012334 Pectin lyase fold XF_0119 a315b949d4f8987fd95640186c326d18 342 SMART SM00710 242 264 780.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat XF_0119 a315b949d4f8987fd95640186c326d18 342 SMART SM00710 196 218 50.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat XF_0119 a315b949d4f8987fd95640186c326d18 342 SMART SM00710 173 195 180.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat XF_0119 a315b949d4f8987fd95640186c326d18 342 SMART SM00710 219 241 710.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat XF_0119 a315b949d4f8987fd95640186c326d18 342 Pfam PF13229 Right handed beta helix region 144 284 7.5E-17 T 14-10-2018 IPR039448 Right handed beta helix domain XF_0119 a315b949d4f8987fd95640186c326d18 342 SMART SM00722 121 293 1.7E-12 T 14-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain XF_2247 970f2e9ba4cfe6270506222acfa3ae78 298 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 61 76 8.2E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2247 970f2e9ba4cfe6270506222acfa3ae78 298 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 8.2E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2247 970f2e9ba4cfe6270506222acfa3ae78 298 Gene3D G3DSA:3.40.50.300 6 185 5.9E-48 T 14-10-2018 XF_2247 970f2e9ba4cfe6270506222acfa3ae78 298 Hamap MF_00367 GTPase Era [era]. 7 297 35.206 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2247 970f2e9ba4cfe6270506222acfa3ae78 298 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 167 1.3E-29 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XF_2247 970f2e9ba4cfe6270506222acfa3ae78 298 Pfam PF01926 50S ribosome-binding GTPase 11 126 1.7E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 XF_2247 970f2e9ba4cfe6270506222acfa3ae78 298 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 280 3.6E-85 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2247 970f2e9ba4cfe6270506222acfa3ae78 298 Pfam PF07650 KH domain 210 285 4.0E-20 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_2247 970f2e9ba4cfe6270506222acfa3ae78 298 SUPERFAMILY SSF52540 11 206 6.83E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2247 970f2e9ba4cfe6270506222acfa3ae78 298 SUPERFAMILY SSF54814 183 298 3.14E-40 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XF_2247 970f2e9ba4cfe6270506222acfa3ae78 298 Gene3D G3DSA:3.30.300.20 187 298 3.9E-41 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta XF_a0040 8ed6932f849c83b50b7439027876469b 469 Gene3D G3DSA:2.40.128.260 277 458 8.3E-58 T 14-10-2018 XF_a0040 8ed6932f849c83b50b7439027876469b 469 Pfam PF03743 Bacterial conjugation TrbI-like protein 275 460 6.8E-57 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI XF_a0040 8ed6932f849c83b50b7439027876469b 469 Gene3D G3DSA:1.10.1200.160 401 439 8.3E-58 T 14-10-2018 XF_2488 6a962e3e8352e30346ad98476303881c 297 Pfam PF04865 Baseplate J-like protein 113 254 9.4E-25 T 14-10-2018 IPR006949 Baseplate protein J-like XF_2488 6a962e3e8352e30346ad98476303881c 297 PIRSF PIRSF020481 5 297 3.8E-118 T 14-10-2018 IPR014507 Baseplate assembly protein J, predicted XF_0724 6a962e3e8352e30346ad98476303881c 297 Pfam PF04865 Baseplate J-like protein 113 254 9.4E-25 T 14-10-2018 IPR006949 Baseplate protein J-like XF_0724 6a962e3e8352e30346ad98476303881c 297 PIRSF PIRSF020481 5 297 3.8E-118 T 14-10-2018 IPR014507 Baseplate assembly protein J, predicted XF_1510 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 1.2E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XF_1510 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.2E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XF_1510 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 1.2E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XF_1510 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 1.4E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XF_1510 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 1.4E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XF_1510 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 1.4E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XF_1510 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 SUPERFAMILY SSF53474 2 301 5.4E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1510 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 Pfam PF00561 alpha/beta hydrolase fold 35 298 1.5E-31 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XF_1510 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 PIRSF PIRSF006431 1 313 2.1E-136 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 XF_1510 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 Gene3D G3DSA:3.40.50.1820 1 313 4.4E-112 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1510 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 312 8.9E-166 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 XF_a0032 211448826b79e475ce4e0943a487f154 251 SUPERFAMILY SSF53474 23 243 8.58E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_a0032 211448826b79e475ce4e0943a487f154 251 Gene3D G3DSA:3.40.50.1820 21 246 1.0E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_a0032 211448826b79e475ce4e0943a487f154 251 Pfam PF12697 Alpha/beta hydrolase family 26 237 7.7E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XF_1353 fd1d3ce74beac9bd0925205ccfab2510 749 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 651 700 1.1E-4 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XF_1353 fd1d3ce74beac9bd0925205ccfab2510 749 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 603 645 0.0032 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XF_1353 fd1d3ce74beac9bd0925205ccfab2510 749 SUPERFAMILY SSF56719 35 489 1.28E-145 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XF_1353 fd1d3ce74beac9bd0925205ccfab2510 749 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 474 1.5E-128 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XF_1353 fd1d3ce74beac9bd0925205ccfab2510 749 SMART SM00434 15 467 8.3E-204 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XF_1353 fd1d3ce74beac9bd0925205ccfab2510 749 Gene3D G3DSA:3.90.199.10 36 487 3.5E-166 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 XF_1353 fd1d3ce74beac9bd0925205ccfab2510 749 SUPERFAMILY SSF101904 503 745 7.19E-48 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XF_1353 fd1d3ce74beac9bd0925205ccfab2510 749 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 32.95 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XF_1353 fd1d3ce74beac9bd0925205ccfab2510 749 Gene3D G3DSA:2.120.10.90 505 736 2.0E-16 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XF_1353 fd1d3ce74beac9bd0925205ccfab2510 749 Gene3D G3DSA:3.30.1360.40 242 337 3.5E-166 T 14-10-2018 XF_1353 fd1d3ce74beac9bd0925205ccfab2510 749 Gene3D G3DSA:1.10.268.10 375 460 3.5E-166 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XF_1353 fd1d3ce74beac9bd0925205ccfab2510 749 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 13 745 0.0 T 14-10-2018 XF_0939 62529423ab7248fa0fcec877d24d5ef1 331 SMART SM00363 25 89 0.0014 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_0939 62529423ab7248fa0fcec877d24d5ef1 331 SUPERFAMILY SSF55174 24 111 1.67E-8 T 14-10-2018 XF_0939 62529423ab7248fa0fcec877d24d5ef1 331 Gene3D G3DSA:3.30.2350.10 91 322 1.8E-70 T 14-10-2018 XF_0939 62529423ab7248fa0fcec877d24d5ef1 331 Gene3D G3DSA:3.10.290.10 12 77 9.5E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XF_0939 62529423ab7248fa0fcec877d24d5ef1 331 Pfam PF00849 RNA pseudouridylate synthase 98 248 6.5E-33 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_0939 62529423ab7248fa0fcec877d24d5ef1 331 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_0939 62529423ab7248fa0fcec877d24d5ef1 331 Pfam PF01479 S4 domain 25 71 1.7E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_0939 62529423ab7248fa0fcec877d24d5ef1 331 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 23 319 3.8E-90 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_0939 62529423ab7248fa0fcec877d24d5ef1 331 SUPERFAMILY SSF55120 83 320 6.17E-76 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XF_2452 4845e35df6dddad0f4160e9d5932732d 327 Pfam PF04079 Segregation and condensation complex subunit ScpB 17 178 1.0E-49 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 XF_2452 4845e35df6dddad0f4160e9d5932732d 327 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 16 180 1.8E-33 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 XF_2452 4845e35df6dddad0f4160e9d5932732d 327 SUPERFAMILY SSF46785 94 169 3.17E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_2452 4845e35df6dddad0f4160e9d5932732d 327 SUPERFAMILY SSF46785 13 91 1.58E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_2452 4845e35df6dddad0f4160e9d5932732d 327 Gene3D G3DSA:1.10.10.10 11 91 8.8E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_2452 4845e35df6dddad0f4160e9d5932732d 327 Gene3D G3DSA:1.10.10.10 92 189 8.1E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_2594 24b62322c26396e264c6b32e8ea992a0 554 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 13 545 33.533 T 14-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 XF_2594 24b62322c26396e264c6b32e8ea992a0 554 Gene3D G3DSA:3.30.2010.10 77 158 2.1E-8 T 14-10-2018 XF_2594 24b62322c26396e264c6b32e8ea992a0 554 Pfam PF01435 Peptidase family M48 78 274 1.1E-42 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 XF_2594 24b62322c26396e264c6b32e8ea992a0 554 Gene3D G3DSA:1.25.40.10 330 522 1.2E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2594 24b62322c26396e264c6b32e8ea992a0 554 SUPERFAMILY SSF48452 342 446 9.91E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_1401 0e36d52d3ce03fdd89bcba797dc5948a 277 Pfam PF03448 MgtE intracellular N domain 6 106 5.3E-24 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain XF_1401 0e36d52d3ce03fdd89bcba797dc5948a 277 SUPERFAMILY SSF158791 2 105 1.09E-22 T 14-10-2018 XF_1401 0e36d52d3ce03fdd89bcba797dc5948a 277 SMART SM00924 5 108 1.3E-33 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain XF_1401 0e36d52d3ce03fdd89bcba797dc5948a 277 SUPERFAMILY SSF54631 107 245 1.77E-23 T 14-10-2018 XF_1401 0e36d52d3ce03fdd89bcba797dc5948a 277 Gene3D G3DSA:3.10.580.10 104 231 2.3E-34 T 14-10-2018 XF_1401 0e36d52d3ce03fdd89bcba797dc5948a 277 Pfam PF00571 CBS domain 108 165 0.0044 T 14-10-2018 IPR000644 CBS domain XF_1401 0e36d52d3ce03fdd89bcba797dc5948a 277 Pfam PF00571 CBS domain 183 226 0.0044 T 14-10-2018 IPR000644 CBS domain XF_1401 0e36d52d3ce03fdd89bcba797dc5948a 277 Gene3D G3DSA:1.25.60.10 1 103 8.3E-13 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily XF_2150 e7d974607f578dc6e4d90cb7aa564940 292 Pfam PF00149 Calcineurin-like phosphoesterase 1 142 8.9E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 XF_2150 e7d974607f578dc6e4d90cb7aa564940 292 Gene3D G3DSA:3.60.21.10 1 270 5.7E-67 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like XF_2150 e7d974607f578dc6e4d90cb7aa564940 292 SUPERFAMILY SSF56300 1 272 1.98E-48 T 14-10-2018 XF_2150 e7d974607f578dc6e4d90cb7aa564940 292 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 43.343 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 XF_2150 e7d974607f578dc6e4d90cb7aa564940 292 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 259 2.4E-78 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 XF_2150 e7d974607f578dc6e4d90cb7aa564940 292 PIRSF PIRSF000903 1 275 7.7E-114 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 XF_2054 31c42072a8cbbf6e4935fe5108346dd5 106 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 5 84 6.3E-16 T 14-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB XF_2054 31c42072a8cbbf6e4935fe5108346dd5 106 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 13 91 1.0E-40 T 14-10-2018 XF_2054 31c42072a8cbbf6e4935fe5108346dd5 106 PIRSF PIRSF017854 1 89 2.7E-36 T 14-10-2018 IPR016704 Conjugal transfer, TrbD XF_0148 9850da43dab60ffbf73753f102793000 232 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 181 186 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site XF_0148 9850da43dab60ffbf73753f102793000 232 TIGRFAM TIGR00608 radc: DNA repair protein RadC 19 232 6.3E-66 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 XF_0148 9850da43dab60ffbf73753f102793000 232 Gene3D G3DSA:3.40.140.10 109 232 3.4E-40 T 14-10-2018 XF_0148 9850da43dab60ffbf73753f102793000 232 SUPERFAMILY SSF47781 24 97 1.17E-8 T 14-10-2018 IPR010994 RuvA domain 2-like XF_0148 9850da43dab60ffbf73753f102793000 232 Pfam PF04002 RadC-like JAB domain 112 230 1.8E-41 T 14-10-2018 IPR025657 RadC-like JAB domain XF_0962 3e85b5d5f545e52d6bb980d6c2d287d9 208 Pfam PF13740 ACT domain 36 109 2.2E-15 T 14-10-2018 XF_0962 3e85b5d5f545e52d6bb980d6c2d287d9 208 Gene3D G3DSA:3.30.70.260 118 204 1.6E-15 T 14-10-2018 XF_0962 3e85b5d5f545e52d6bb980d6c2d287d9 208 SUPERFAMILY SSF55021 119 207 6.7E-18 T 14-10-2018 XF_0962 3e85b5d5f545e52d6bb980d6c2d287d9 208 SUPERFAMILY SSF55021 33 114 2.42E-8 T 14-10-2018 XF_0962 3e85b5d5f545e52d6bb980d6c2d287d9 208 PIRSF PIRSF028103 33 208 7.3E-73 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 XF_0962 3e85b5d5f545e52d6bb980d6c2d287d9 208 Gene3D G3DSA:3.30.70.260 50 116 4.4E-8 T 14-10-2018 XF_0716 50e4e031f5e5502541c08acb5b232b8b 108 Gene3D G3DSA:2.40.10.180 12 108 1.3E-5 T 14-10-2018 XF_2495 50e4e031f5e5502541c08acb5b232b8b 108 Gene3D G3DSA:2.40.10.180 12 108 1.3E-5 T 14-10-2018 XF_2024 c4b7ab1e6387e9a5c84534ee5711a2ef 332 Pfam PF12706 Beta-lactamase superfamily domain 84 285 2.7E-39 T 14-10-2018 IPR001279 Metallo-beta-lactamase XF_2024 c4b7ab1e6387e9a5c84534ee5711a2ef 332 PIRSF PIRSF038896 8 330 5.6E-98 T 14-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 XF_2024 c4b7ab1e6387e9a5c84534ee5711a2ef 332 Gene3D G3DSA:3.60.15.10 33 332 1.1E-75 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XF_2024 c4b7ab1e6387e9a5c84534ee5711a2ef 332 SUPERFAMILY SSF56281 68 297 6.68E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 Gene3D G3DSA:1.10.601.10 119 452 4.3E-114 T 14-10-2018 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 SUPERFAMILY SSF88659 513 615 7.2E-28 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 Pfam PF04542 Sigma-70 region 2 383 452 1.4E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 Gene3D G3DSA:1.10.10.10 533 616 2.1E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 SUPERFAMILY SSF88946 121 450 2.35E-96 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 Pfam PF04546 Sigma-70, non-essential region 145 352 1.3E-49 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 Gene3D G3DSA:1.10.10.10 456 532 3.9E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 Gene3D G3DSA:1.10.220.120 5 67 3.5E-27 T 14-10-2018 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 576 602 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 Pfam PF03979 Sigma-70 factor, region 1.1 7 87 1.9E-28 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 616 47.543 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 Pfam PF04545 Sigma-70, region 4 551 604 1.8E-19 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 SUPERFAMILY SSF88659 456 529 2.78E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 PRINTS PR00046 Major sigma-70 factor signature 576 591 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 PRINTS PR00046 Major sigma-70 factor signature 591 602 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 PRINTS PR00046 Major sigma-70 factor signature 555 567 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 PRINTS PR00046 Major sigma-70 factor signature 407 420 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 PRINTS PR00046 Major sigma-70 factor signature 431 439 3.1E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 379 615 1.4E-120 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 Pfam PF04539 Sigma-70 region 3 462 537 1.3E-30 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 379 604 7.4E-38 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 407 420 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XF_1350 b365c3adedcf98be3a3e7c15d7f0a724 618 Pfam PF00140 Sigma-70 factor, region 1.2 104 135 5.1E-13 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XF_0220 cd967606d8426421e32438dde0862ae2 400 Gene3D G3DSA:3.40.350.10 1 165 1.3E-44 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XF_0220 cd967606d8426421e32438dde0862ae2 400 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 166 2.2E-15 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 XF_0220 cd967606d8426421e32438dde0862ae2 400 SUPERFAMILY SSF53092 18 165 3.84E-21 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XF_0220 cd967606d8426421e32438dde0862ae2 400 SUPERFAMILY SSF55920 166 392 5.23E-65 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like XF_0220 cd967606d8426421e32438dde0862ae2 400 Pfam PF00557 Metallopeptidase family M24 175 382 2.5E-47 T 14-10-2018 IPR000994 Peptidase M24 XF_0220 cd967606d8426421e32438dde0862ae2 400 Gene3D G3DSA:3.90.230.10 166 399 2.7E-71 T 14-10-2018 XF_1807 2d440f5c4c958e856df5b86c749aa94e 608 Gene3D G3DSA:3.30.300.150 475 588 5.4E-15 T 14-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1807 2d440f5c4c958e856df5b86c749aa94e 608 SUPERFAMILY SSF52540 34 223 2.17E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1807 2d440f5c4c958e856df5b86c749aa94e 608 Gene3D G3DSA:1.20.272.10 242 359 2.5E-35 T 14-10-2018 XF_1807 2d440f5c4c958e856df5b86c749aa94e 608 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 361 4.0E-25 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 XF_1807 2d440f5c4c958e856df5b86c749aa94e 608 SMART SM00382 37 188 1.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1807 2d440f5c4c958e856df5b86c749aa94e 608 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 484 603 1.3E-11 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1807 2d440f5c4c958e856df5b86c749aa94e 608 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.5E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 XF_1807 2d440f5c4c958e856df5b86c749aa94e 608 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.5E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 XF_1807 2d440f5c4c958e856df5b86c749aa94e 608 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 353 1.2E-126 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 XF_1807 2d440f5c4c958e856df5b86c749aa94e 608 Gene3D G3DSA:1.10.8.60 8 239 1.5E-101 T 14-10-2018 XF_1807 2d440f5c4c958e856df5b86c749aa94e 608 Pfam PF13177 DNA polymerase III, delta subunit 20 178 3.6E-45 T 14-10-2018 XF_1807 2d440f5c4c958e856df5b86c749aa94e 608 Gene3D G3DSA:3.40.50.300 13 177 1.5E-101 T 14-10-2018 XF_1807 2d440f5c4c958e856df5b86c749aa94e 608 SUPERFAMILY SSF48019 243 363 6.46E-29 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 XF_0379 281b63afc5e01323a017a0dd8f62d48e 57 PRINTS PR00163 Rubredoxin signature 5 21 3.9E-6 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 XF_0379 281b63afc5e01323a017a0dd8f62d48e 57 PRINTS PR00163 Rubredoxin signature 35 51 3.9E-6 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 XF_0379 281b63afc5e01323a017a0dd8f62d48e 57 SUPERFAMILY SSF57802 2 54 1.35E-20 T 14-10-2018 XF_0379 281b63afc5e01323a017a0dd8f62d48e 57 ProSitePatterns PS00202 Rubredoxin signature. 35 45 - T 14-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 XF_0379 281b63afc5e01323a017a0dd8f62d48e 57 Pfam PF00301 Rubredoxin 6 51 1.3E-19 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 XF_0379 281b63afc5e01323a017a0dd8f62d48e 57 Gene3D G3DSA:2.20.28.10 1 56 9.4E-25 T 14-10-2018 XF_1486 8d57cfd86d059a6ec9cc257e57e3bace 451 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 46 443 5.8E-95 T 14-10-2018 IPR018721 Protein of unknown function DUF2252 XF_2577 24a6877297f024abb27be436b4ed6f32 405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 400 3.1E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_2577 24a6877297f024abb27be436b4ed6f32 405 SUPERFAMILY SSF47384 197 239 3.34E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XF_2577 24a6877297f024abb27be436b4ed6f32 405 SMART SM00387 293 401 5.8E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_2577 24a6877297f024abb27be436b4ed6f32 405 SUPERFAMILY SSF55874 268 399 4.98E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_2577 24a6877297f024abb27be436b4ed6f32 405 Gene3D G3DSA:1.10.287.130 176 259 5.4E-6 T 14-10-2018 XF_2577 24a6877297f024abb27be436b4ed6f32 405 Gene3D G3DSA:3.30.565.10 260 404 3.7E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_0193 00076caf63a94bb05731967cb732ffe6 123 PIRSF PIRSF006113 3 123 7.8E-49 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 XF_0193 00076caf63a94bb05731967cb732ffe6 123 SUPERFAMILY SSF55620 5 122 1.39E-39 T 14-10-2018 XF_0193 00076caf63a94bb05731967cb732ffe6 123 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 8 121 7.4E-34 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 XF_0193 00076caf63a94bb05731967cb732ffe6 123 Gene3D G3DSA:3.30.479.10 4 123 8.0E-46 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 XF_0193 00076caf63a94bb05731967cb732ffe6 123 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 8 99 2.5E-32 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 XF_0140 936b09d7f70a858c6d910218b08090c0 368 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 8 366 1.9E-105 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 XF_0140 936b09d7f70a858c6d910218b08090c0 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 365 2.3E-68 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 XF_2058 1d84ee7a1b6305a89e4e7a8853b68bf2 178 SUPERFAMILY SSF51306 31 176 1.36E-17 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XF_2058 1d84ee7a1b6305a89e4e7a8853b68bf2 178 TIGRFAM TIGR02771 TraF_Ti: conjugative transfer signal peptidase TraF 11 178 4.6E-70 T 14-10-2018 IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF GO:0000746|GO:0042597 XF_2058 1d84ee7a1b6305a89e4e7a8853b68bf2 178 Gene3D G3DSA:2.10.109.10 80 177 3.0E-10 T 14-10-2018 XF_2058 1d84ee7a1b6305a89e4e7a8853b68bf2 178 Pfam PF10502 Signal peptidase, peptidase S26 32 177 4.4E-42 T 14-10-2018 IPR019533 Peptidase S26 XF_a0002 ad226b2639911e4d6ccb4f9d282ae706 191 Pfam PF01464 Transglycosylase SLT domain 6 145 1.1E-19 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 XF_a0002 ad226b2639911e4d6ccb4f9d282ae706 191 SUPERFAMILY SSF53955 16 149 1.55E-15 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_a0002 ad226b2639911e4d6ccb4f9d282ae706 191 Gene3D G3DSA:1.10.530.10 12 162 4.3E-13 T 14-10-2018 XF_0321 150f48d929c712d158c3361843020aa5 398 SUPERFAMILY SSF56935 27 392 6.02E-11 T 14-10-2018 XF_0321 150f48d929c712d158c3361843020aa5 398 Pfam PF07396 Phosphate-selective porin O and P 35 398 6.7E-100 T 14-10-2018 IPR010870 Phosphate-selective porin O/P XF_0321 150f48d929c712d158c3361843020aa5 398 Gene3D G3DSA:2.40.160.10 17 398 6.1E-74 T 14-10-2018 IPR023614 Porin domain superfamily XF_0684 0dd1e8479c6fe94169ae03cf921ba705 503 SMART SM01040 147 233 5.1E-40 T 14-10-2018 IPR003497 BRO N-terminal domain XF_0684 0dd1e8479c6fe94169ae03cf921ba705 503 SMART SM01040 15 103 1.4E-26 T 14-10-2018 IPR003497 BRO N-terminal domain XF_0684 0dd1e8479c6fe94169ae03cf921ba705 503 SMART SM01040 263 351 3.4E-37 T 14-10-2018 IPR003497 BRO N-terminal domain XF_0684 0dd1e8479c6fe94169ae03cf921ba705 503 Pfam PF02498 BRO family, N-terminal domain 16 103 3.5E-15 T 14-10-2018 IPR003497 BRO N-terminal domain XF_0684 0dd1e8479c6fe94169ae03cf921ba705 503 Pfam PF02498 BRO family, N-terminal domain 148 233 1.5E-23 T 14-10-2018 IPR003497 BRO N-terminal domain XF_0684 0dd1e8479c6fe94169ae03cf921ba705 503 Pfam PF02498 BRO family, N-terminal domain 264 351 1.7E-25 T 14-10-2018 IPR003497 BRO N-terminal domain XF_1140 b86581f37ee781a9bf7ae833b1cf1ce0 457 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 6 453 39.424 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 XF_1140 b86581f37ee781a9bf7ae833b1cf1ce0 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 2.5E-7 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1140 b86581f37ee781a9bf7ae833b1cf1ce0 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 397 430 8.3E-6 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1140 b86581f37ee781a9bf7ae833b1cf1ce0 457 Gene3D G3DSA:3.90.550.10 6 228 1.8E-58 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_1140 b86581f37ee781a9bf7ae833b1cf1ce0 457 SUPERFAMILY SSF51161 256 439 2.03E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily XF_1140 b86581f37ee781a9bf7ae833b1cf1ce0 457 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 8 456 4.2E-192 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 XF_1140 b86581f37ee781a9bf7ae833b1cf1ce0 457 Pfam PF12804 MobA-like NTP transferase domain 10 135 6.4E-24 T 14-10-2018 IPR025877 MobA-like NTP transferase XF_1140 b86581f37ee781a9bf7ae833b1cf1ce0 457 Gene3D G3DSA:2.160.10.10 230 457 1.9E-59 T 14-10-2018 XF_1140 b86581f37ee781a9bf7ae833b1cf1ce0 457 SUPERFAMILY SSF53448 7 249 2.17E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_1739 304471ea7f8528e5debb87a317b6b927 385 SUPERFAMILY SSF56281 107 355 2.49E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XF_1739 304471ea7f8528e5debb87a317b6b927 385 Gene3D G3DSA:3.60.15.10 42 344 2.8E-72 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XF_1739 304471ea7f8528e5debb87a317b6b927 385 Pfam PF12706 Beta-lactamase superfamily domain 123 317 7.2E-44 T 14-10-2018 IPR001279 Metallo-beta-lactamase XF_2244 e26d1d63773e0679f4570834bcef93ef 266 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 50 246 5.8E-44 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XF_2244 e26d1d63773e0679f4570834bcef93ef 266 Gene3D G3DSA:2.170.230.10 140 203 5.3E-60 T 14-10-2018 XF_2244 e26d1d63773e0679f4570834bcef93ef 266 ProSitePatterns PS00760 Signal peptidases I lysine active site. 131 143 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 XF_2244 e26d1d63773e0679f4570834bcef93ef 266 ProSitePatterns PS00761 Signal peptidases I signature 3. 209 222 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 XF_2244 e26d1d63773e0679f4570834bcef93ef 266 Pfam PF00717 Peptidase S24-like 71 153 5.5E-21 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XF_2244 e26d1d63773e0679f4570834bcef93ef 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 65 81 6.8E-24 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XF_2244 e26d1d63773e0679f4570834bcef93ef 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 129 141 6.8E-24 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XF_2244 e26d1d63773e0679f4570834bcef93ef 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 204 223 6.8E-24 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XF_2244 e26d1d63773e0679f4570834bcef93ef 266 SUPERFAMILY SSF51306 63 251 6.02E-62 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XF_2244 e26d1d63773e0679f4570834bcef93ef 266 Gene3D G3DSA:2.10.109.10 63 246 5.3E-60 T 14-10-2018 XF_2457 07878a783efc88572cc59b0b8503266b 247 Pfam PF01578 Cytochrome C assembly protein 10 187 2.0E-25 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 XF_2457 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 124 144 2.7E-40 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2457 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 65 85 2.7E-40 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2457 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 103 123 2.7E-40 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2457 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 48 65 2.7E-40 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2457 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 159 185 2.7E-40 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_2457 07878a783efc88572cc59b0b8503266b 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 50 212 2.3E-59 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XF_1908 cbebc53321b2e3ce79f79ab6bee74341 105 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 16 79 6.0E-34 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XF_1908 cbebc53321b2e3ce79f79ab6bee74341 105 SUPERFAMILY SSF111148 16 104 8.63E-33 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 XF_1908 cbebc53321b2e3ce79f79ab6bee74341 105 Pfam PF04362 Bacterial Fe(2+) trafficking 16 103 2.6E-35 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XF_1908 cbebc53321b2e3ce79f79ab6bee74341 105 PIRSF PIRSF029827 16 105 1.9E-38 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XF_1908 cbebc53321b2e3ce79f79ab6bee74341 105 Gene3D G3DSA:1.10.3880.10 16 105 3.1E-31 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 XF_1908 cbebc53321b2e3ce79f79ab6bee74341 105 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 16 103 26.076 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XF_1901 60aeaa53f3c134e730c5934c91166a82 148 SUPERFAMILY SSF54637 14 144 3.12E-34 T 14-10-2018 IPR029069 HotDog domain superfamily XF_1901 60aeaa53f3c134e730c5934c91166a82 148 Pfam PF03061 Thioesterase superfamily 31 114 7.9E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 XF_1901 60aeaa53f3c134e730c5934c91166a82 148 Gene3D G3DSA:3.10.129.10 3 145 3.0E-32 T 14-10-2018 XF_1901 60aeaa53f3c134e730c5934c91166a82 148 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 16 139 1.2E-45 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 XF_1901 60aeaa53f3c134e730c5934c91166a82 148 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 20 134 1.6E-27 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 XF_1901 60aeaa53f3c134e730c5934c91166a82 148 PIRSF PIRSF003230 6 147 5.8E-38 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 XF_1414 df4b0d3fb42bdfd87a9537a16a987e3b 75 SUPERFAMILY SSF82657 3 74 7.06E-21 T 14-10-2018 IPR036065 BolA-like superfamily XF_1414 df4b0d3fb42bdfd87a9537a16a987e3b 75 PIRSF PIRSF003113 2 75 7.3E-19 T 14-10-2018 IPR002634 BolA protein XF_1414 df4b0d3fb42bdfd87a9537a16a987e3b 75 Gene3D G3DSA:3.30.300.90 1 75 4.6E-29 T 14-10-2018 XF_1414 df4b0d3fb42bdfd87a9537a16a987e3b 75 Pfam PF01722 BolA-like protein 18 74 3.1E-16 T 14-10-2018 IPR002634 BolA protein XF_2712 636f957606d4e487616817972402db5b 305 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 192 296 1.7E-33 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XF_2712 636f957606d4e487616817972402db5b 305 Gene3D G3DSA:3.40.50.720 32 193 8.4E-46 T 14-10-2018 XF_2712 636f957606d4e487616817972402db5b 305 SUPERFAMILY SSF48179 191 298 8.5E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XF_2712 636f957606d4e487616817972402db5b 305 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 32 296 25.938 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XF_2712 636f957606d4e487616817972402db5b 305 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 34 296 1.3E-87 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XF_2712 636f957606d4e487616817972402db5b 305 PIRSF PIRSF000193 31 299 1.9E-72 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XF_2712 636f957606d4e487616817972402db5b 305 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 34 128 2.2E-15 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal XF_2712 636f957606d4e487616817972402db5b 305 SUPERFAMILY SSF51735 34 189 2.91E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2712 636f957606d4e487616817972402db5b 305 Gene3D G3DSA:1.10.3730.10 194 300 2.0E-37 T 14-10-2018 XF_0466 289f7773a1df53d853cf411b15c33f55 379 SUPERFAMILY SSF52821 2 105 9.3E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily XF_0466 289f7773a1df53d853cf411b15c33f55 379 Gene3D G3DSA:3.40.250.10 4 105 1.6E-21 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily XF_0466 289f7773a1df53d853cf411b15c33f55 379 Pfam PF00899 ThiF family 119 356 6.2E-66 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 XF_0466 289f7773a1df53d853cf411b15c33f55 379 SMART SM00450 6 102 3.4E-8 T 14-10-2018 IPR001763 Rhodanese-like domain XF_0466 289f7773a1df53d853cf411b15c33f55 379 Gene3D G3DSA:3.40.50.720 112 363 2.7E-89 T 14-10-2018 XF_0466 289f7773a1df53d853cf411b15c33f55 379 Pfam PF00581 Rhodanese-like domain 7 98 1.9E-7 T 14-10-2018 IPR001763 Rhodanese-like domain XF_0466 289f7773a1df53d853cf411b15c33f55 379 SUPERFAMILY SSF69572 107 361 4.32E-89 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 XF_0979 760e60a2b71068fa0e829f45162850ac 200 Gene3D G3DSA:3.40.50.150 3 188 1.4E-53 T 14-10-2018 XF_0979 760e60a2b71068fa0e829f45162850ac 200 PIRSF PIRSF004553 8 186 1.3E-42 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 XF_0979 760e60a2b71068fa0e829f45162850ac 200 SUPERFAMILY SSF53335 9 184 2.07E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0979 760e60a2b71068fa0e829f45162850ac 200 Pfam PF03602 Conserved hypothetical protein 95 9 184 6.6E-55 T 14-10-2018 XF_0979 760e60a2b71068fa0e829f45162850ac 200 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 7 184 2.3E-42 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 XF_0979 760e60a2b71068fa0e829f45162850ac 200 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 123 129 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XF_1482 623302154dc09b5d3b75592b08c48ed4 226 Gene3D G3DSA:3.30.450.40 46 224 2.9E-41 T 14-10-2018 IPR029016 GAF-like domain superfamily XF_1482 623302154dc09b5d3b75592b08c48ed4 226 Pfam PF04340 Protein of unknown function, DUF484 7 226 2.1E-85 T 14-10-2018 IPR007435 Protein of unknown function DUF484 XF_1608 c9d4e74de253cc367ba10da50d31d813 211 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 69 211 3.8E-24 T 14-10-2018 IPR018636 Protein of unknown function DUF2058 XF_0835 c359778e8832b4abd41c66c8c68c13b0 402 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 6 389 2.9E-125 T 14-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 XF_0835 c359778e8832b4abd41c66c8c68c13b0 402 Pfam PF01494 FAD binding domain 6 347 2.1E-33 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 XF_0835 c359778e8832b4abd41c66c8c68c13b0 402 Gene3D G3DSA:3.50.50.60 6 337 3.1E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_0835 c359778e8832b4abd41c66c8c68c13b0 402 Gene3D G3DSA:3.30.9.50 78 271 3.1E-82 T 14-10-2018 XF_0835 c359778e8832b4abd41c66c8c68c13b0 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 389 1.7E-104 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 XF_0835 c359778e8832b4abd41c66c8c68c13b0 402 SUPERFAMILY SSF51905 6 378 9.15E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_0835 c359778e8832b4abd41c66c8c68c13b0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 4.2E-20 T 14-10-2018 XF_0835 c359778e8832b4abd41c66c8c68c13b0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.2E-20 T 14-10-2018 XF_0835 c359778e8832b4abd41c66c8c68c13b0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 4.2E-20 T 14-10-2018 XF_0835 c359778e8832b4abd41c66c8c68c13b0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 4.2E-20 T 14-10-2018 XF_1820 eac98691ed9e95f96692c83b0d3bde00 81 SUPERFAMILY SSF55021 1 75 1.49E-5 T 14-10-2018 XF_1820 eac98691ed9e95f96692c83b0d3bde00 81 Pfam PF13710 ACT domain 12 73 2.9E-20 T 14-10-2018 XF_2030 9df8bd0595be7cd59b077e7257cdd3d4 93 Pfam PF04255 Protein of unknown function (DUF433) 24 79 2.3E-22 T 14-10-2018 IPR007367 Protein of unknown function DUF433 XF_2030 9df8bd0595be7cd59b077e7257cdd3d4 93 Gene3D G3DSA:1.10.10.10 23 92 1.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_2030 9df8bd0595be7cd59b077e7257cdd3d4 93 SUPERFAMILY SSF46689 13 90 5.38E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XF_2728 f89c3a526981d9bf2f688734a0335f01 525 SUPERFAMILY SSF53335 11 523 5.84E-121 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_2728 f89c3a526981d9bf2f688734a0335f01 525 Gene3D G3DSA:3.40.50.150 203 483 1.5E-75 T 14-10-2018 XF_2728 f89c3a526981d9bf2f688734a0335f01 525 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 342 366 1.3E-17 T 14-10-2018 XF_2728 f89c3a526981d9bf2f688734a0335f01 525 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 205 221 1.3E-17 T 14-10-2018 XF_2728 f89c3a526981d9bf2f688734a0335f01 525 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 231 245 1.3E-17 T 14-10-2018 XF_2728 f89c3a526981d9bf2f688734a0335f01 525 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 304 316 1.3E-17 T 14-10-2018 XF_2728 f89c3a526981d9bf2f688734a0335f01 525 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 511 4.6E-218 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 XF_2728 f89c3a526981d9bf2f688734a0335f01 525 Gene3D G3DSA:1.20.1260.30 2 199 1.3E-50 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily XF_2728 f89c3a526981d9bf2f688734a0335f01 525 Pfam PF12161 HsdM N-terminal domain 12 165 1.1E-19 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain XF_2728 f89c3a526981d9bf2f688734a0335f01 525 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 307 313 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XF_2728 f89c3a526981d9bf2f688734a0335f01 525 Pfam PF02384 N-6 DNA Methylase 181 489 1.1E-105 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 XF_a0015 c2b397fb726ae87249f530088475644d 347 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 32 337 7.3E-129 T 14-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 XF_a0015 c2b397fb726ae87249f530088475644d 347 Gene3D G3DSA:3.30.450.90 22 128 7.1E-37 T 14-10-2018 XF_a0015 c2b397fb726ae87249f530088475644d 347 Gene3D G3DSA:3.40.50.300 129 346 2.8E-58 T 14-10-2018 XF_a0015 c2b397fb726ae87249f530088475644d 347 Pfam PF00437 Type II/IV secretion system protein 27 326 1.1E-55 T 14-10-2018 IPR001482 Type II/IV secretion system protein XF_a0015 c2b397fb726ae87249f530088475644d 347 SUPERFAMILY SSF52540 25 330 5.55E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0500 12d52fd4266e379fdd3bcf10da9afa8b 143 Gene3D G3DSA:1.10.260.40 9 59 1.3E-5 T 14-10-2018 XF_0500 12d52fd4266e379fdd3bcf10da9afa8b 143 SUPERFAMILY SSF47413 5 57 3.22E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_1475 684aee17c36a62a33dcd52d49cc11212 278 Gene3D G3DSA:3.40.50.300 1 248 3.0E-60 T 14-10-2018 XF_1475 684aee17c36a62a33dcd52d49cc11212 278 Pfam PF00005 ABC transporter 17 172 5.0E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_1475 684aee17c36a62a33dcd52d49cc11212 278 SUPERFAMILY SSF52540 2 248 8.59E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1475 684aee17c36a62a33dcd52d49cc11212 278 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 5.3E-108 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 XF_1475 684aee17c36a62a33dcd52d49cc11212 278 SMART SM00382 26 230 3.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_2334 dbad94879146a94f52251938ee44095c 152 Gene3D G3DSA:1.10.3830.10 34 151 4.1E-37 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 XF_2334 dbad94879146a94f52251938ee44095c 152 Pfam PF01219 Prokaryotic diacylglycerol kinase 48 147 1.2E-32 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 XF_1053 438db3cf43da49d581119f7be1a62fc3 447 SUPERFAMILY SSF56935 30 447 2.2E-77 T 14-10-2018 XF_1053 438db3cf43da49d581119f7be1a62fc3 447 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 21 447 2.9E-145 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) XF_1053 438db3cf43da49d581119f7be1a62fc3 447 Gene3D G3DSA:2.40.160.60 30 447 1.6E-115 T 14-10-2018 XF_0900 b4ab5a02294eb5c396772561fdd7d0c8 365 SUPERFAMILY SSF143865 30 297 7.98E-69 T 14-10-2018 XF_0900 b4ab5a02294eb5c396772561fdd7d0c8 365 SUPERFAMILY SSF144083 301 362 3.4E-16 T 14-10-2018 XF_0900 b4ab5a02294eb5c396772561fdd7d0c8 365 Gene3D G3DSA:1.20.58.340 289 365 1.1E-18 T 14-10-2018 XF_0900 b4ab5a02294eb5c396772561fdd7d0c8 365 Gene3D G3DSA:1.20.58.340 175 287 1.8E-31 T 14-10-2018 XF_0900 b4ab5a02294eb5c396772561fdd7d0c8 365 Pfam PF01544 CorA-like Mg2+ transporter protein 74 361 1.3E-59 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 XF_0900 b4ab5a02294eb5c396772561fdd7d0c8 365 Gene3D G3DSA:3.30.460.20 20 174 7.7E-27 T 14-10-2018 XF_a0022 bf5a0ad129b3c4828e1ee5b67fb7a4b9 139 SUPERFAMILY SSF88723 1 115 1.01E-15 T 14-10-2018 IPR029060 PIN-like domain superfamily XF_a0022 bf5a0ad129b3c4828e1ee5b67fb7a4b9 139 SMART SM00670 1 117 3.6E-14 T 14-10-2018 IPR002716 PIN domain XF_a0022 bf5a0ad129b3c4828e1ee5b67fb7a4b9 139 Pfam PF13470 PIN domain 2 113 9.2E-18 T 14-10-2018 IPR002716 PIN domain XF_a0022 bf5a0ad129b3c4828e1ee5b67fb7a4b9 139 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 2 112 8.5E-15 T 14-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component XF_1477 5c429f92629b598ec1a8cb36e4e16d05 153 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 1.0E-30 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type XF_1477 5c429f92629b598ec1a8cb36e4e16d05 153 Gene3D G3DSA:1.10.10.10 1 141 3.3E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1477 5c429f92629b598ec1a8cb36e4e16d05 153 Pfam PF02082 Transcriptional regulator 3 83 2.4E-23 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type XF_1477 5c429f92629b598ec1a8cb36e4e16d05 153 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 3.3E-53 T 14-10-2018 IPR014290 SUF system FeS cluster assembly regulator XF_1477 5c429f92629b598ec1a8cb36e4e16d05 153 SUPERFAMILY SSF46785 3 134 1.09E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_0564 6a4ab50faedd8a7c53a80d2ec6e8979d 71 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 67 20.13 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 XF_0564 6a4ab50faedd8a7c53a80d2ec6e8979d 71 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 9.9E-22 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 XF_0564 6a4ab50faedd8a7c53a80d2ec6e8979d 71 Pfam PF02416 mttA/Hcf106 family 5 48 4.0E-15 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 XF_2060 fdb9843483f66f0911ffffd53fffe0c6 122 PIRSF PIRSF017849 1 121 4.7E-54 T 14-10-2018 IPR016703 Conjugal transfer, TraD, beta/gamma-type XF_2174 72fde30cded642509f275d2074ed6e44 338 Pfam PF14559 Tetratricopeptide repeat 188 245 2.5E-6 T 14-10-2018 XF_2174 72fde30cded642509f275d2074ed6e44 338 Gene3D G3DSA:1.25.40.10 184 247 1.9E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2174 72fde30cded642509f275d2074ed6e44 338 Gene3D G3DSA:1.25.40.10 252 338 8.3E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2174 72fde30cded642509f275d2074ed6e44 338 SUPERFAMILY SSF52833 56 163 7.21E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_2174 72fde30cded642509f275d2074ed6e44 338 Pfam PF14561 Tetratricopeptide repeat 255 338 9.9E-19 T 14-10-2018 XF_2174 72fde30cded642509f275d2074ed6e44 338 ProSitePatterns PS00194 Thioredoxin family active site. 81 99 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XF_2174 72fde30cded642509f275d2074ed6e44 338 Pfam PF00085 Thioredoxin 59 163 1.8E-25 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 XF_2174 72fde30cded642509f275d2074ed6e44 338 Gene3D G3DSA:3.40.30.10 41 163 7.6E-32 T 14-10-2018 XF_0361 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Pfam PF03796 DnaB-like helicase C terminal domain 207 461 1.9E-116 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 XF_0361 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Gene3D G3DSA:3.40.50.300 190 467 2.2E-108 T 14-10-2018 XF_0361 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Gene3D G3DSA:1.10.860.10 23 183 1.7E-51 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal XF_0361 5df8d370cb487a8fdf5cd9d4e9b78d84 471 SUPERFAMILY SSF48024 27 139 1.57E-36 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 XF_0361 5df8d370cb487a8fdf5cd9d4e9b78d84 471 SUPERFAMILY SSF52540 205 454 2.41E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0361 5df8d370cb487a8fdf5cd9d4e9b78d84 471 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 29 463 7.6E-176 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 XF_0361 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Pfam PF00772 DnaB-like helicase N terminal domain 29 130 4.2E-33 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 XF_0677 4a40610ac23fa46925f8396b731da33f 118 Pfam PF07238 PilZ domain 14 104 8.5E-7 T 14-10-2018 IPR009875 PilZ domain GO:0035438 XF_0677 4a40610ac23fa46925f8396b731da33f 118 Gene3D G3DSA:2.40.10.220 2 118 1.4E-42 T 14-10-2018 XF_1130 eb22e73b0dcdfaa33907ea86329843b0 185 Pfam PF04751 Protein of unknown function (DUF615) 20 173 1.3E-43 T 14-10-2018 IPR006839 Ribosome-associated, YjgA XF_1130 eb22e73b0dcdfaa33907ea86329843b0 185 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 9 177 22.078 T 14-10-2018 IPR006839 Ribosome-associated, YjgA XF_1130 eb22e73b0dcdfaa33907ea86329843b0 185 SUPERFAMILY SSF158710 34 177 6.93E-42 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily XF_1130 eb22e73b0dcdfaa33907ea86329843b0 185 Gene3D G3DSA:1.10.60.30 107 180 3.1E-24 T 14-10-2018 XF_1130 eb22e73b0dcdfaa33907ea86329843b0 185 Gene3D G3DSA:1.10.60.30 30 104 1.5E-20 T 14-10-2018 XF_1130 eb22e73b0dcdfaa33907ea86329843b0 185 PIRSF PIRSF016183 2 181 1.2E-62 T 14-10-2018 IPR006839 Ribosome-associated, YjgA XF_1378 d69d321618fbca747471e71e9d91f4d0 463 Hamap MF_01498 DNA repair protein RadA [radA]. 26 463 42.711 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 XF_1378 d69d321618fbca747471e71e9d91f4d0 463 SMART SM00382 99 252 8.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1378 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 330 353 3.3E-91 T 14-10-2018 XF_1378 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 132 149 3.3E-91 T 14-10-2018 XF_1378 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 182 206 3.3E-91 T 14-10-2018 XF_1378 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 221 249 3.3E-91 T 14-10-2018 XF_1378 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 15 39 3.3E-91 T 14-10-2018 XF_1378 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 91 119 3.3E-91 T 14-10-2018 XF_1378 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 256 282 3.3E-91 T 14-10-2018 XF_1378 d69d321618fbca747471e71e9d91f4d0 463 SUPERFAMILY SSF52540 77 299 3.04E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1378 d69d321618fbca747471e71e9d91f4d0 463 TIGRFAM TIGR00416 sms: DNA repair protein RadA 7 459 8.9E-186 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 XF_1378 d69d321618fbca747471e71e9d91f4d0 463 Pfam PF13481 AAA domain 92 230 6.1E-12 T 14-10-2018 XF_1378 d69d321618fbca747471e71e9d91f4d0 463 SUPERFAMILY SSF54211 263 461 4.17E-39 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_1378 d69d321618fbca747471e71e9d91f4d0 463 Gene3D G3DSA:3.40.50.300 70 294 9.8E-40 T 14-10-2018 XF_1378 d69d321618fbca747471e71e9d91f4d0 463 Gene3D G3DSA:3.30.230.10 305 463 1.1E-16 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XF_1378 d69d321618fbca747471e71e9d91f4d0 463 Pfam PF13541 Subunit ChlI of Mg-chelatase 359 438 1.5E-8 T 14-10-2018 XF_1945 a4adf6e62498f6da20c50bf4d209d32e 145 Pfam PF06903 VirK protein 29 124 2.1E-31 T 14-10-2018 IPR010694 Uncharacterised protein family VirK XF_0864 b21d74c2d30eaf809182ce9cb16343b2 405 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 14 389 1.3E-173 T 14-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 XF_0864 b21d74c2d30eaf809182ce9cb16343b2 405 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XF_0864 b21d74c2d30eaf809182ce9cb16343b2 405 SUPERFAMILY SSF53383 18 389 1.9E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XF_0864 b21d74c2d30eaf809182ce9cb16343b2 405 Gene3D G3DSA:3.40.640.10 10 255 3.1E-81 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XF_0864 b21d74c2d30eaf809182ce9cb16343b2 405 PIRSF PIRSF001434 4 392 3.8E-134 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XF_0864 b21d74c2d30eaf809182ce9cb16343b2 405 Gene3D G3DSA:3.90.1150.10 256 393 5.5E-52 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XF_0864 b21d74c2d30eaf809182ce9cb16343b2 405 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 388 9.1E-134 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XF_1054 825af4ba8c8104e54d9c52cc8348faa8 232 SUPERFAMILY SSF144091 15 228 4.19E-33 T 14-10-2018 XF_1054 825af4ba8c8104e54d9c52cc8348faa8 232 Pfam PF01694 Rhomboid family 70 224 1.3E-34 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 XF_1054 825af4ba8c8104e54d9c52cc8348faa8 232 Gene3D G3DSA:1.20.1540.10 18 229 1.8E-26 T 14-10-2018 IPR035952 Rhomboid-like superfamily XF_2266 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 Gene3D G3DSA:3.30.9.10 84 325 4.2E-132 T 14-10-2018 XF_2266 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 Pfam PF01266 FAD dependent oxidoreductase 7 329 3.1E-47 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 XF_2266 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 389 479 1.4E-12 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XF_2266 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 Gene3D G3DSA:3.50.50.60 7 369 4.2E-132 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_2266 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 SUPERFAMILY SSF54373 231 324 9.42E-7 T 14-10-2018 XF_2266 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 29 7.7E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XF_2266 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 6 18 7.7E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XF_2266 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 47 7.7E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XF_2266 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 80 92 7.7E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XF_2266 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 350 362 7.7E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XF_2266 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 318 324 7.7E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XF_2266 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 Gene3D G3DSA:1.10.8.870 393 464 2.1E-22 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XF_2266 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 SUPERFAMILY SSF51905 1 370 5.0E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XF_1745 11240be6034a1cbe0f9a61666e05ca9a 338 Pfam PF01738 Dienelactone hydrolase family 65 169 4.9E-9 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 XF_1745 11240be6034a1cbe0f9a61666e05ca9a 338 SUPERFAMILY SSF53474 28 337 6.55E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1745 11240be6034a1cbe0f9a61666e05ca9a 338 Gene3D G3DSA:1.10.10.800 176 266 6.4E-107 T 14-10-2018 XF_1745 11240be6034a1cbe0f9a61666e05ca9a 338 Gene3D G3DSA:3.40.50.1820 41 321 6.4E-107 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1709 686edbd34d15e11e0ce165b6e0cddd7a 96 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 3 96 8.2E-34 T 14-10-2018 IPR007711 Toxin HigB-1 XF_1709 686edbd34d15e11e0ce165b6e0cddd7a 96 SUPERFAMILY SSF143011 1 96 2.55E-7 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XF_1785 d97bf67bbf612713f73bbfd04948b280 291 SUPERFAMILY SSF52540 1 266 1.15E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1785 d97bf67bbf612713f73bbfd04948b280 291 Pfam PF13614 AAA domain 1 168 9.4E-26 T 14-10-2018 IPR025669 AAA domain XF_1785 d97bf67bbf612713f73bbfd04948b280 291 Gene3D G3DSA:3.40.50.300 1 269 1.2E-47 T 14-10-2018 XF_1081 fb9ee0788f9513c2ab5948da61247f86 589 SUPERFAMILY SSF52540 338 584 9.35E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1081 fb9ee0788f9513c2ab5948da61247f86 589 SUPERFAMILY SSF90123 18 331 9.68E-66 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XF_1081 fb9ee0788f9513c2ab5948da61247f86 589 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 16 586 9.8E-261 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 XF_1081 fb9ee0788f9513c2ab5948da61247f86 589 Gene3D G3DSA:3.40.50.300 335 585 3.1E-88 T 14-10-2018 XF_1081 fb9ee0788f9513c2ab5948da61247f86 589 Gene3D G3DSA:1.20.1560.10 4 334 4.4E-69 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XF_1081 fb9ee0788f9513c2ab5948da61247f86 589 SMART SM00382 372 559 4.3E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1081 fb9ee0788f9513c2ab5948da61247f86 589 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_1081 fb9ee0788f9513c2ab5948da61247f86 589 Pfam PF00005 ABC transporter 363 513 9.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_1081 fb9ee0788f9513c2ab5948da61247f86 589 Pfam PF00664 ABC transporter transmembrane region 39 297 1.9E-36 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XF_0428 6c0f1565036973786967b9bb352a511d 434 Gene3D G3DSA:3.40.50.620 8 336 2.3E-106 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0428 6c0f1565036973786967b9bb352a511d 434 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 154 175 5.5E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XF_0428 6c0f1565036973786967b9bb352a511d 434 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 19 35 5.5E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XF_0428 6c0f1565036973786967b9bb352a511d 434 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 206 216 5.5E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XF_0428 6c0f1565036973786967b9bb352a511d 434 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 71 90 5.5E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XF_0428 6c0f1565036973786967b9bb352a511d 434 SUPERFAMILY SSF52374 7 336 3.03E-75 T 14-10-2018 XF_0428 6c0f1565036973786967b9bb352a511d 434 Pfam PF00579 tRNA synthetases class I (W and Y) 7 283 1.4E-52 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_0428 6c0f1565036973786967b9bb352a511d 434 Gene3D G3DSA:1.10.240.10 201 303 2.3E-106 T 14-10-2018 XF_0428 6c0f1565036973786967b9bb352a511d 434 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 6 336 2.3E-81 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XF_0428 6c0f1565036973786967b9bb352a511d 434 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 6 337 35.196 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 XF_0428 6c0f1565036973786967b9bb352a511d 434 SUPERFAMILY SSF160113 359 408 9.68E-9 T 14-10-2018 IPR036913 YegP-like superfamily XF_1322 ee65f3ba2c9860fd2196e40280a5bf70 238 Gene3D G3DSA:3.30.750.120 8 122 4.5E-9 T 14-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily XF_1322 ee65f3ba2c9860fd2196e40280a5bf70 238 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 8 111 2.6E-26 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 XF_1322 ee65f3ba2c9860fd2196e40280a5bf70 238 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 12 237 1.7E-86 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 XF_1322 ee65f3ba2c9860fd2196e40280a5bf70 238 SUPERFAMILY SSF63848 134 237 1.03E-29 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 XF_1322 ee65f3ba2c9860fd2196e40280a5bf70 238 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 11 238 26.315 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 XF_1322 ee65f3ba2c9860fd2196e40280a5bf70 238 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 136 234 7.3E-31 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 XF_1322 ee65f3ba2c9860fd2196e40280a5bf70 238 Gene3D G3DSA:2.160.20.70 130 238 3.9E-30 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 XF_0910 35610dce9e3f5acd22184924e221070c 253 PRINTS PR00603 Cytochrome C1 signature 199 218 3.0E-10 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 XF_0910 35610dce9e3f5acd22184924e221070c 253 PRINTS PR00603 Cytochrome C1 signature 52 71 3.0E-10 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 XF_0910 35610dce9e3f5acd22184924e221070c 253 PRINTS PR00603 Cytochrome C1 signature 114 138 3.0E-10 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 XF_0910 35610dce9e3f5acd22184924e221070c 253 Pfam PF02167 Cytochrome C1 family 44 251 6.0E-24 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 XF_0910 35610dce9e3f5acd22184924e221070c 253 Gene3D G3DSA:1.10.760.10 36 218 6.4E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 XF_0910 35610dce9e3f5acd22184924e221070c 253 SUPERFAMILY SSF46626 27 217 2.06E-46 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 XF_2329 5309501cb1ed1118873d3197e8ab8629 248 SMART SM00382 30 213 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_2329 5309501cb1ed1118873d3197e8ab8629 248 Gene3D G3DSA:3.40.50.300 1 245 4.4E-66 T 14-10-2018 XF_2329 5309501cb1ed1118873d3197e8ab8629 248 Pfam PF00005 ABC transporter 22 165 6.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_2329 5309501cb1ed1118873d3197e8ab8629 248 SUPERFAMILY SSF52540 2 226 9.85E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2329 5309501cb1ed1118873d3197e8ab8629 248 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_0673 76789c88ec01150b13da4b1d4f2b5c93 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 245 3.1E-58 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XF_0673 76789c88ec01150b13da4b1d4f2b5c93 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 409 3.5E-196 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 XF_0673 76789c88ec01150b13da4b1d4f2b5c93 411 Gene3D G3DSA:3.40.47.10 256 400 1.5E-55 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 XF_0673 76789c88ec01150b13da4b1d4f2b5c93 411 SUPERFAMILY SSF53901 213 410 1.92E-74 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 XF_0673 76789c88ec01150b13da4b1d4f2b5c93 411 PIRSF PIRSF000447 1 411 7.7E-185 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 XF_0673 76789c88ec01150b13da4b1d4f2b5c93 411 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site XF_0673 76789c88ec01150b13da4b1d4f2b5c93 411 SMART SM00825 Beta-ketoacyl synthase 5 411 2.6E-16 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XF_0673 76789c88ec01150b13da4b1d4f2b5c93 411 Gene3D G3DSA:3.40.47.10 1 254 1.1E-86 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 XF_0673 76789c88ec01150b13da4b1d4f2b5c93 411 SUPERFAMILY SSF53901 2 251 1.07E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 XF_0673 76789c88ec01150b13da4b1d4f2b5c93 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 2.2E-40 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XF_1115 3832b229c90ce6c4c4fe66a2b2c71000 290 Gene3D G3DSA:3.90.226.10 11 229 6.6E-77 T 14-10-2018 XF_1115 3832b229c90ce6c4c4fe66a2b2c71000 290 SUPERFAMILY SSF52096 66 257 1.19E-35 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XF_1115 3832b229c90ce6c4c4fe66a2b2c71000 290 Pfam PF00378 Enoyl-CoA hydratase/isomerase 69 214 3.0E-20 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 XF_1966 2632a6339b92c7668e1c6f58ba4ef2a7 840 Gene3D G3DSA:3.40.50.300 21 218 6.9E-14 T 14-10-2018 XF_1966 2632a6339b92c7668e1c6f58ba4ef2a7 840 SUPERFAMILY SSF52540 48 382 3.1E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1966 2632a6339b92c7668e1c6f58ba4ef2a7 840 SUPERFAMILY SSF52540 43 208 6.08E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1966 2632a6339b92c7668e1c6f58ba4ef2a7 840 Pfam PF04851 Type III restriction enzyme, res subunit 43 201 5.2E-6 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XF_2432 a6d54e37e8fdf6c23abf242e032865aa 296 Gene3D G3DSA:3.90.550.10 1 292 2.4E-82 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_2432 a6d54e37e8fdf6c23abf242e032865aa 296 SUPERFAMILY SSF53448 5 280 3.6E-62 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_2432 a6d54e37e8fdf6c23abf242e032865aa 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 267 5.8E-107 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 XF_2432 a6d54e37e8fdf6c23abf242e032865aa 296 Pfam PF00483 Nucleotidyl transferase 12 271 8.7E-30 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XF_1045 aac1382faf0522d4d78d4a860de60d81 354 SUPERFAMILY SSF51161 49 334 1.07E-75 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily XF_1045 aac1382faf0522d4d78d4a860de60d81 354 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 21 342 35.035 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 XF_1045 aac1382faf0522d4d78d4a860de60d81 354 Gene3D G3DSA:3.40.1390.10 14 113 2.9E-28 T 14-10-2018 XF_1045 aac1382faf0522d4d78d4a860de60d81 354 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 24 345 2.3E-132 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 XF_1045 aac1382faf0522d4d78d4a860de60d81 354 Gene3D G3DSA:2.160.10.10 114 325 3.9E-60 T 14-10-2018 XF_1045 aac1382faf0522d4d78d4a860de60d81 354 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 276 301 0.095 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1045 aac1382faf0522d4d78d4a860de60d81 354 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 39 105 1.4E-20 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 XF_1045 aac1382faf0522d4d78d4a860de60d81 354 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 215 231 0.0027 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1045 aac1382faf0522d4d78d4a860de60d81 354 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 238 273 2.1E-6 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1045 aac1382faf0522d4d78d4a860de60d81 354 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 156 196 2.5E-5 T 14-10-2018 IPR001451 Hexapeptide repeat XF_0089 2befb4597ed22ab182d9b09736203d9d 92 SUPERFAMILY SSF50182 7 68 4.62E-24 T 14-10-2018 IPR010920 LSM domain superfamily XF_0089 2befb4597ed22ab182d9b09736203d9d 92 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.485 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 XF_0089 2befb4597ed22ab182d9b09736203d9d 92 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 9.6E-30 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 XF_0089 2befb4597ed22ab182d9b09736203d9d 92 Pfam PF17209 Hfq protein 7 68 6.9E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 XF_0089 2befb4597ed22ab182d9b09736203d9d 92 Gene3D G3DSA:2.30.30.100 1 70 7.4E-33 T 14-10-2018 XF_0596 5d1ed8df68aa1a853928ee46099810be 174 Pfam PF10029 Predicted periplasmic protein (DUF2271) 22 161 2.5E-50 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 XF_0596 5d1ed8df68aa1a853928ee46099810be 174 PIRSF PIRSF014995 1 170 4.6E-74 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 XF_0594 9514c7a2fe02de40c07ff63f71abd600 311 SUPERFAMILY SSF143631 1 305 2.62E-86 T 14-10-2018 IPR003374 ApbE-like superfamily XF_0594 9514c7a2fe02de40c07ff63f71abd600 311 PIRSF PIRSF006268 1 306 4.2E-76 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 XF_0594 9514c7a2fe02de40c07ff63f71abd600 311 Pfam PF02424 ApbE family 1 279 9.4E-77 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 XF_0594 9514c7a2fe02de40c07ff63f71abd600 311 Gene3D G3DSA:3.10.520.20 1 309 4.8E-96 T 14-10-2018 XF_0338 8c2d9ff90342755116b956c602eab65c 158 Gene3D G3DSA:3.40.1280.10 2 157 1.1E-49 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XF_0338 8c2d9ff90342755116b956c602eab65c 158 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 4 156 1.2E-48 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XF_0338 8c2d9ff90342755116b956c602eab65c 158 SUPERFAMILY SSF75217 2 155 4.36E-49 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases XF_0338 8c2d9ff90342755116b956c602eab65c 158 PIRSF PIRSF004505 2 156 5.0E-48 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XF_0338 8c2d9ff90342755116b956c602eab65c 158 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 2 156 27.733 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XF_0338 8c2d9ff90342755116b956c602eab65c 158 Pfam PF02590 Predicted SPOUT methyltransferase 2 155 2.0E-48 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XF_0377 06152c2e9ac27398873c66b325d99125 402 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 341 350 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 XF_0377 06152c2e9ac27398873c66b325d99125 402 Pfam PF00067 Cytochrome P450 82 368 6.0E-31 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 XF_0377 06152c2e9ac27398873c66b325d99125 402 Gene3D G3DSA:1.10.630.10 1 402 2.2E-116 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 XF_0377 06152c2e9ac27398873c66b325d99125 402 SUPERFAMILY SSF48264 9 399 3.14E-90 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 XF_0377 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 290 317 1.2E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_0377 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 273 284 1.2E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_0377 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 348 359 1.2E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_0377 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 85 96 1.2E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_0377 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 131 147 1.2E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_0377 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 318 333 1.2E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_0377 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 339 348 1.2E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_0377 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 192 214 1.2E-42 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XF_2237 2f1b920515bfa470ed8781ec0fa25807 958 SUPERFAMILY SSF56935 43 958 6.41E-82 T 14-10-2018 XF_2237 2f1b920515bfa470ed8781ec0fa25807 958 Gene3D G3DSA:2.170.130.10 39 170 1.0E-31 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XF_2237 2f1b920515bfa470ed8781ec0fa25807 958 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 166 5.8E-22 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain XF_2237 2f1b920515bfa470ed8781ec0fa25807 958 Pfam PF00593 TonB dependent receptor 397 956 3.6E-35 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XF_0585 cd8389f4c6dd95df3d5cfeae3bdeba32 222 Pfam PF00551 Formyl transferase 9 185 3.5E-48 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XF_0585 cd8389f4c6dd95df3d5cfeae3bdeba32 222 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 9 196 2.0E-59 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 XF_0585 cd8389f4c6dd95df3d5cfeae3bdeba32 222 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 9 192 26.099 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 XF_0585 cd8389f4c6dd95df3d5cfeae3bdeba32 222 Gene3D G3DSA:3.40.50.170 1 207 1.0E-67 T 14-10-2018 XF_0585 cd8389f4c6dd95df3d5cfeae3bdeba32 222 SUPERFAMILY SSF53328 8 199 2.62E-56 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XF_2615 48e08b3f14edc6ae5e4729728253a51d 173 Gene3D G3DSA:3.10.450.30 78 172 7.8E-33 T 14-10-2018 XF_2615 48e08b3f14edc6ae5e4729728253a51d 173 Pfam PF00545 ribonuclease 86 166 2.7E-26 T 14-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 XF_2615 48e08b3f14edc6ae5e4729728253a51d 173 SUPERFAMILY SSF53933 85 168 8.22E-32 T 14-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 XF_0291 8d8f09314f5d5f109becfa4f7305b96c 144 SUPERFAMILY SSF88723 15 131 4.71E-9 T 14-10-2018 IPR029060 PIN-like domain superfamily XF_0291 8d8f09314f5d5f109becfa4f7305b96c 144 Pfam PF01850 PIN domain 16 131 6.9E-7 T 14-10-2018 IPR002716 PIN domain XF_0291 8d8f09314f5d5f109becfa4f7305b96c 144 Gene3D G3DSA:3.40.50.1010 13 118 4.2E-7 T 14-10-2018 XF_2537 35b50d251c62ba148e5da02a91007d03 287 Gene3D G3DSA:1.20.120.1220 128 281 1.2E-5 T 14-10-2018 XF_2537 35b50d251c62ba148e5da02a91007d03 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 210 221 2.4E-18 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XF_2537 35b50d251c62ba148e5da02a91007d03 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 222 237 2.4E-18 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XF_2537 35b50d251c62ba148e5da02a91007d03 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 142 159 2.4E-18 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XF_2537 35b50d251c62ba148e5da02a91007d03 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 199 209 2.4E-18 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XF_2537 35b50d251c62ba148e5da02a91007d03 287 Pfam PF01478 Type IV leader peptidase family 133 241 1.1E-22 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 XF_2537 35b50d251c62ba148e5da02a91007d03 287 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 18 123 1.9E-26 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal XF_1828 ccb14ee87d73d351fda31af084f812ac 405 SUPERFAMILY SSF52540 73 215 5.32E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1828 ccb14ee87d73d351fda31af084f812ac 405 Pfam PF03969 AFG1-like ATPase 19 104 2.4E-18 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 XF_1828 ccb14ee87d73d351fda31af084f812ac 405 Pfam PF03969 AFG1-like ATPase 130 400 7.6E-90 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 XF_1828 ccb14ee87d73d351fda31af084f812ac 405 Gene3D G3DSA:3.40.50.300 40 221 3.1E-14 T 14-10-2018 XF_0244 c16588e566c1af4b7eded6af1d5e68b7 369 Pfam PF13437 HlyD family secretion protein 171 270 8.4E-6 T 14-10-2018 XF_0244 c16588e566c1af4b7eded6af1d5e68b7 369 Gene3D G3DSA:2.40.420.20 39 354 6.3E-55 T 14-10-2018 XF_0244 c16588e566c1af4b7eded6af1d5e68b7 369 SUPERFAMILY SSF111369 49 178 1.57E-9 T 14-10-2018 XF_0244 c16588e566c1af4b7eded6af1d5e68b7 369 Pfam PF13533 Biotin-lipoyl like 68 107 2.4E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain XF_0244 c16588e566c1af4b7eded6af1d5e68b7 369 Gene3D G3DSA:1.10.287.470 93 166 6.3E-55 T 14-10-2018 XF_0244 c16588e566c1af4b7eded6af1d5e68b7 369 Gene3D G3DSA:2.40.50.100 59 205 6.3E-55 T 14-10-2018 XF_0244 c16588e566c1af4b7eded6af1d5e68b7 369 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 355 4.4E-87 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XF_0244 c16588e566c1af4b7eded6af1d5e68b7 369 Gene3D G3DSA:2.40.30.170 45 280 6.3E-55 T 14-10-2018 XF_2572 6a540637f91976a016300b6d03cf95f2 351 SUPERFAMILY SSF56194 219 349 5.62E-44 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_2572 6a540637f91976a016300b6d03cf95f2 351 SUPERFAMILY SSF56176 18 203 5.12E-35 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XF_2572 6a540637f91976a016300b6d03cf95f2 351 Pfam PF01565 FAD binding domain 52 163 2.8E-15 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 XF_2572 6a540637f91976a016300b6d03cf95f2 351 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 351 77.814 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_2572 6a540637f91976a016300b6d03cf95f2 351 Gene3D G3DSA:3.90.78.10 236 351 7.0E-42 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_2572 6a540637f91976a016300b6d03cf95f2 351 Gene3D G3DSA:3.30.43.10 11 80 6.4E-15 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 XF_2572 6a540637f91976a016300b6d03cf95f2 351 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 18 348 3.3E-64 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_2572 6a540637f91976a016300b6d03cf95f2 351 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 223 347 6.7E-33 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_2572 6a540637f91976a016300b6d03cf95f2 351 Gene3D G3DSA:3.30.465.10 83 235 4.7E-51 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XF_2433 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 Gene3D G3DSA:3.40.50.720 282 617 9.2E-106 T 14-10-2018 XF_2433 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 Gene3D G3DSA:3.40.50.720 144 268 5.5E-30 T 14-10-2018 XF_2433 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 Pfam PF13727 CoA-binding domain 68 242 4.0E-12 T 14-10-2018 XF_2433 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 SUPERFAMILY SSF51735 285 553 2.13E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2433 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 Pfam PF02719 Polysaccharide biosynthesis protein 287 570 3.5E-112 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain XF_2433 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 SUPERFAMILY SSF53335 129 322 2.99E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_1269 742baa8e90e6c3a617a5dda80fbbfef0 373 TIGRFAM TIGR00510 lipA: lipoyl synthase 48 330 9.9E-133 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XF_1269 742baa8e90e6c3a617a5dda80fbbfef0 373 SUPERFAMILY SSF102114 68 332 1.96E-67 T 14-10-2018 XF_1269 742baa8e90e6c3a617a5dda80fbbfef0 373 Gene3D G3DSA:3.20.20.70 94 307 1.3E-23 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_1269 742baa8e90e6c3a617a5dda80fbbfef0 373 PIRSF PIRSF005963 1 352 3.0E-141 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XF_1269 742baa8e90e6c3a617a5dda80fbbfef0 373 SMART SM00729 97 305 6.8E-17 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XF_1269 742baa8e90e6c3a617a5dda80fbbfef0 373 Hamap MF_00206 Lipoyl synthase [lipA]. 50 339 149.811 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XF_1269 742baa8e90e6c3a617a5dda80fbbfef0 373 Pfam PF04055 Radical SAM superfamily 103 267 5.0E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XF_1269 742baa8e90e6c3a617a5dda80fbbfef0 373 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 49 86 2.6E-8 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XF_2286 8f8f231fb3682a03e9ae32a217b57579 432 PRINTS PR00981 Seryl-tRNA synthetase signature 272 284 3.9E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XF_2286 8f8f231fb3682a03e9ae32a217b57579 432 PRINTS PR00981 Seryl-tRNA synthetase signature 359 375 3.9E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XF_2286 8f8f231fb3682a03e9ae32a217b57579 432 PRINTS PR00981 Seryl-tRNA synthetase signature 284 297 3.9E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XF_2286 8f8f231fb3682a03e9ae32a217b57579 432 PRINTS PR00981 Seryl-tRNA synthetase signature 341 357 3.9E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XF_2286 8f8f231fb3682a03e9ae32a217b57579 432 PRINTS PR00981 Seryl-tRNA synthetase signature 324 337 3.9E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XF_2286 8f8f231fb3682a03e9ae32a217b57579 432 Hamap MF_00176 Serine--tRNA ligase [serS]. 7 430 38.396 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XF_2286 8f8f231fb3682a03e9ae32a217b57579 432 SUPERFAMILY SSF46589 7 119 1.31E-23 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 XF_2286 8f8f231fb3682a03e9ae32a217b57579 432 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 231 408 3.4E-33 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2286 8f8f231fb3682a03e9ae32a217b57579 432 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 7 114 6.0E-28 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 XF_2286 8f8f231fb3682a03e9ae32a217b57579 432 Gene3D G3DSA:3.30.930.10 112 431 1.2E-114 T 14-10-2018 XF_2286 8f8f231fb3682a03e9ae32a217b57579 432 SUPERFAMILY SSF55681 123 426 6.47E-97 T 14-10-2018 XF_2286 8f8f231fb3682a03e9ae32a217b57579 432 Gene3D G3DSA:1.10.287.40 7 111 6.8E-15 T 14-10-2018 XF_2286 8f8f231fb3682a03e9ae32a217b57579 432 TIGRFAM TIGR00414 serS: serine--tRNA ligase 7 425 2.0E-159 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XF_2286 8f8f231fb3682a03e9ae32a217b57579 432 PIRSF PIRSF001529 7 432 5.2E-164 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XF_0792 ff9ef4d6607e4906f64f4524000a98fc 613 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 209 3.0E-18 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 XF_0792 ff9ef4d6607e4906f64f4524000a98fc 613 Gene3D G3DSA:3.40.710.10 286 467 6.1E-111 T 14-10-2018 XF_0792 ff9ef4d6607e4906f64f4524000a98fc 613 Pfam PF00905 Penicillin binding protein transpeptidase domain 250 546 9.4E-83 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XF_0792 ff9ef4d6607e4906f64f4524000a98fc 613 SUPERFAMILY SSF56601 177 577 2.9E-96 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XF_0792 ff9ef4d6607e4906f64f4524000a98fc 613 SUPERFAMILY SSF56519 57 224 4.58E-47 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 XF_0792 ff9ef4d6607e4906f64f4524000a98fc 613 Gene3D G3DSA:3.30.450.330 226 550 6.1E-111 T 14-10-2018 XF_0792 ff9ef4d6607e4906f64f4524000a98fc 613 Gene3D G3DSA:3.90.1310.30 53 224 1.8E-49 T 14-10-2018 XF_0792 ff9ef4d6607e4906f64f4524000a98fc 613 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 13 561 43.053 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XF_2487 7a404b6004445859c8bc5c7b8bf89294 185 Pfam PF09684 Phage tail protein (Tail_P2_I) 9 150 8.4E-46 T 14-10-2018 IPR006521 Tail protein I XF_2487 7a404b6004445859c8bc5c7b8bf89294 185 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 9 147 7.3E-70 T 14-10-2018 IPR006521 Tail protein I XF_0725 7a404b6004445859c8bc5c7b8bf89294 185 Pfam PF09684 Phage tail protein (Tail_P2_I) 9 150 8.4E-46 T 14-10-2018 IPR006521 Tail protein I XF_0725 7a404b6004445859c8bc5c7b8bf89294 185 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 9 147 7.3E-70 T 14-10-2018 IPR006521 Tail protein I XF_1065 96d93a4198175137acb4febb02c1228c 477 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 3 465 1.1E-134 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XF_1065 96d93a4198175137acb4febb02c1228c 477 SUPERFAMILY SSF51735 3 179 9.25E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1065 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 156 184 3.7E-40 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XF_1065 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 226 242 3.7E-40 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XF_1065 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 132 145 3.7E-40 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XF_1065 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 208 225 3.7E-40 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XF_1065 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 313 339 3.7E-40 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XF_1065 96d93a4198175137acb4febb02c1228c 477 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 7 176 2.3E-41 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XF_1065 96d93a4198175137acb4febb02c1228c 477 Gene3D G3DSA:3.30.360.10 166 461 5.9E-141 T 14-10-2018 XF_1065 96d93a4198175137acb4febb02c1228c 477 SUPERFAMILY SSF55347 171 468 2.62E-97 T 14-10-2018 XF_1065 96d93a4198175137acb4febb02c1228c 477 Gene3D G3DSA:3.40.50.720 5 422 5.9E-141 T 14-10-2018 XF_1065 96d93a4198175137acb4febb02c1228c 477 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 179 465 1.8E-94 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XF_1065 96d93a4198175137acb4febb02c1228c 477 PIRSF PIRSF000110 1 470 4.9E-156 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XF_1065 96d93a4198175137acb4febb02c1228c 477 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 2 474 66.699 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XF_a0025 7b039f06d15b41c08fc86951f3851ce5 161 SUPERFAMILY SSF55729 28 157 4.03E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase XF_a0025 7b039f06d15b41c08fc86951f3851ce5 161 Pfam PF13673 Acetyltransferase (GNAT) domain 80 147 1.3E-6 T 14-10-2018 IPR000182 GNAT domain XF_a0025 7b039f06d15b41c08fc86951f3851ce5 161 Gene3D G3DSA:3.40.630.30 1 160 1.2E-46 T 14-10-2018 XF_0928 2b79e055d5918f239ac315394a3a19c7 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 209 223 1.0E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XF_0928 2b79e055d5918f239ac315394a3a19c7 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 354 370 1.0E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XF_0928 2b79e055d5918f239ac315394a3a19c7 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 238 248 1.0E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XF_0928 2b79e055d5918f239ac315394a3a19c7 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 304 316 1.0E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XF_0928 2b79e055d5918f239ac315394a3a19c7 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 402 419 1.0E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XF_0928 2b79e055d5918f239ac315394a3a19c7 421 Pfam PF01189 16S rRNA methyltransferase RsmB/F 227 417 3.0E-52 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 XF_0928 2b79e055d5918f239ac315394a3a19c7 421 Gene3D G3DSA:3.40.50.150 218 420 6.6E-58 T 14-10-2018 XF_0928 2b79e055d5918f239ac315394a3a19c7 421 SUPERFAMILY SSF53335 131 419 7.9E-67 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0928 2b79e055d5918f239ac315394a3a19c7 421 Gene3D G3DSA:3.30.70.1170 160 217 5.1E-18 T 14-10-2018 XF_0928 2b79e055d5918f239ac315394a3a19c7 421 SUPERFAMILY SSF48013 2 136 1.8E-24 T 14-10-2018 IPR035926 NusB-like superfamily XF_0928 2b79e055d5918f239ac315394a3a19c7 421 Gene3D G3DSA:1.10.940.10 1 132 6.0E-29 T 14-10-2018 IPR035926 NusB-like superfamily XF_0928 2b79e055d5918f239ac315394a3a19c7 421 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 3 419 3.8E-101 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 XF_0928 2b79e055d5918f239ac315394a3a19c7 421 Pfam PF01029 NusB family 12 120 3.1E-16 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 XF_0928 2b79e055d5918f239ac315394a3a19c7 421 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 303 314 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 XF_0007 a513cd2b2680144a33f675fb451f1638 397 Gene3D G3DSA:1.25.40.10 108 222 2.9E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_0007 a513cd2b2680144a33f675fb451f1638 397 SUPERFAMILY SSF48452 320 382 2.72E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_0007 a513cd2b2680144a33f675fb451f1638 397 SUPERFAMILY SSF48452 113 274 3.03E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_0007 a513cd2b2680144a33f675fb451f1638 397 Pfam PF13181 Tetratricopeptide repeat 183 208 0.19 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_0007 a513cd2b2680144a33f675fb451f1638 397 Pfam PF13181 Tetratricopeptide repeat 354 381 0.056 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_0007 a513cd2b2680144a33f675fb451f1638 397 Gene3D G3DSA:1.25.40.10 314 396 2.4E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_0007 a513cd2b2680144a33f675fb451f1638 397 Pfam PF13432 Tetratricopeptide repeat 113 173 4.1E-4 T 14-10-2018 XF_0007 a513cd2b2680144a33f675fb451f1638 397 SMART SM00028 320 352 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_0007 a513cd2b2680144a33f675fb451f1638 397 SMART SM00028 353 386 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_0007 a513cd2b2680144a33f675fb451f1638 397 SMART SM00028 144 177 350.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_0007 a513cd2b2680144a33f675fb451f1638 397 SMART SM00028 179 212 1.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_0007 a513cd2b2680144a33f675fb451f1638 397 Gene3D G3DSA:1.25.40.10 223 302 1.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_0783 9457b41edb4d1ff44dd5d284eb5d9347 275 Hamap MF_00443 Thiazole synthase [thiG]. 20 275 42.354 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 XF_0783 9457b41edb4d1ff44dd5d284eb5d9347 275 SUPERFAMILY SSF110399 19 261 9.02E-88 T 14-10-2018 XF_0783 9457b41edb4d1ff44dd5d284eb5d9347 275 Gene3D G3DSA:3.20.20.70 13 275 1.4E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_0783 9457b41edb4d1ff44dd5d284eb5d9347 275 Pfam PF05690 Thiazole biosynthesis protein ThiG 23 269 9.9E-110 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 XF_0314 04368c222372703e0a3fa4725595e20b 222 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 22 168 3.0E-35 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0314 04368c222372703e0a3fa4725595e20b 222 Gene3D G3DSA:1.20.120.1200 5 170 3.4E-40 T 14-10-2018 XF_2049 a4df3e974275f98101f38302a863db0b 466 Gene3D G3DSA:1.10.1200.160 398 436 7.6E-58 T 14-10-2018 XF_2049 a4df3e974275f98101f38302a863db0b 466 Gene3D G3DSA:2.40.128.260 274 455 7.6E-58 T 14-10-2018 XF_2049 a4df3e974275f98101f38302a863db0b 466 Pfam PF03743 Bacterial conjugation TrbI-like protein 272 457 1.5E-56 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI XF_1102 475022fffd529f6dba00edceb0fc8d60 97 Gene3D G3DSA:2.20.130.30 32 97 1.3E-16 T 14-10-2018 XF_1102 475022fffd529f6dba00edceb0fc8d60 97 Pfam PF11191 Protein of unknown function (DUF2782) 40 97 3.5E-15 T 14-10-2018 IPR021357 Protein of unknown function DUF2782 XF_1517 cb37c77eb8580ce90d570e62643be9d2 583 Pfam PF00437 Type II/IV secretion system protein 208 472 1.3E-84 T 14-10-2018 IPR001482 Type II/IV secretion system protein XF_1517 cb37c77eb8580ce90d570e62643be9d2 583 Gene3D G3DSA:3.30.450.90 175 305 1.5E-49 T 14-10-2018 XF_1517 cb37c77eb8580ce90d570e62643be9d2 583 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 400 414 - T 14-10-2018 IPR001482 Type II/IV secretion system protein XF_1517 cb37c77eb8580ce90d570e62643be9d2 583 Gene3D G3DSA:1.10.40.70 18 79 2.0E-26 T 14-10-2018 XF_1517 cb37c77eb8580ce90d570e62643be9d2 583 SUPERFAMILY SSF52540 190 580 2.46E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1517 cb37c77eb8580ce90d570e62643be9d2 583 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 61 168 1.9E-14 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal XF_1517 cb37c77eb8580ce90d570e62643be9d2 583 Gene3D G3DSA:3.40.50.300 308 582 1.4E-102 T 14-10-2018 XF_1517 cb37c77eb8580ce90d570e62643be9d2 583 Gene3D G3DSA:3.30.300.160 80 165 7.4E-30 T 14-10-2018 XF_1517 cb37c77eb8580ce90d570e62643be9d2 583 SMART SM00382 333 454 1.9E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1517 cb37c77eb8580ce90d570e62643be9d2 583 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 100 580 2.6E-216 T 14-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 XF_1517 cb37c77eb8580ce90d570e62643be9d2 583 SUPERFAMILY SSF160246 19 165 3.92E-30 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily XF_1803 017ba291b16e10e5ee7cef06b55cb407 190 Gene3D G3DSA:2.40.160.10 16 125 2.3E-6 T 14-10-2018 IPR023614 Porin domain superfamily XF_1803 017ba291b16e10e5ee7cef06b55cb407 190 SUPERFAMILY SSF56935 15 155 2.42E-7 T 14-10-2018 XF_1803 017ba291b16e10e5ee7cef06b55cb407 190 TIGRFAM TIGR04273 Y_sulf_Ax21: sulfation-dependent quorum factor, Ax21 family 6 190 2.1E-91 T 14-10-2018 IPR026364 Ax21 family XF_1015 062a098cf53ae7aedaa03712de079ffc 472 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 44 463 38.148 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XF_1015 062a098cf53ae7aedaa03712de079ffc 472 PRINTS PR00447 Natural resistance-associated macrophage protein signature 191 212 3.3E-58 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XF_1015 062a098cf53ae7aedaa03712de079ffc 472 PRINTS PR00447 Natural resistance-associated macrophage protein signature 407 426 3.3E-58 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XF_1015 062a098cf53ae7aedaa03712de079ffc 472 PRINTS PR00447 Natural resistance-associated macrophage protein signature 138 164 3.3E-58 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XF_1015 062a098cf53ae7aedaa03712de079ffc 472 PRINTS PR00447 Natural resistance-associated macrophage protein signature 166 185 3.3E-58 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XF_1015 062a098cf53ae7aedaa03712de079ffc 472 PRINTS PR00447 Natural resistance-associated macrophage protein signature 243 266 3.3E-58 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XF_1015 062a098cf53ae7aedaa03712de079ffc 472 PRINTS PR00447 Natural resistance-associated macrophage protein signature 375 392 3.3E-58 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XF_1015 062a098cf53ae7aedaa03712de079ffc 472 PRINTS PR00447 Natural resistance-associated macrophage protein signature 347 366 3.3E-58 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XF_1015 062a098cf53ae7aedaa03712de079ffc 472 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 59 431 3.8E-113 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XF_1015 062a098cf53ae7aedaa03712de079ffc 472 Pfam PF01566 Natural resistance-associated macrophage protein 79 435 3.7E-127 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XF_2245 459fa08db09137a0bb0c7ad7c34c0201 137 Pfam PF16137 Domain of unknown function (DUF4845) 45 125 4.9E-19 T 14-10-2018 IPR032314 Protein of unknown function DUF4845 XF_2143 676b87883b7b312a8d53ad372ea64abb 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 17 282 3.2E-89 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 XF_2143 676b87883b7b312a8d53ad372ea64abb 287 SUPERFAMILY SSF161098 25 273 3.27E-30 T 14-10-2018 IPR035906 MetI-like superfamily XF_2143 676b87883b7b312a8d53ad372ea64abb 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 276 1.1E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XF_2143 676b87883b7b312a8d53ad372ea64abb 287 Gene3D G3DSA:1.10.3720.10 63 283 2.7E-24 T 14-10-2018 IPR035906 MetI-like superfamily XF_2156 4d23f6ead86abe46338789f3f9db8b3a 240 Gene3D G3DSA:3.60.40.10 5 240 6.1E-54 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 XF_2156 4d23f6ead86abe46338789f3f9db8b3a 240 SMART SM00332 9 237 1.7E-13 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 XF_2156 4d23f6ead86abe46338789f3f9db8b3a 240 Pfam PF13672 Protein phosphatase 2C 27 202 4.7E-14 T 14-10-2018 XF_2156 4d23f6ead86abe46338789f3f9db8b3a 240 SUPERFAMILY SSF81606 12 239 6.28E-52 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 XF_2156 4d23f6ead86abe46338789f3f9db8b3a 240 SMART SM00331 18 239 3.3E-15 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 XF_0633 7fbacfed7bf73b0fbc18003b7b7a92df 452 Pfam PF13481 AAA domain 112 287 4.8E-28 T 14-10-2018 XF_0633 7fbacfed7bf73b0fbc18003b7b7a92df 452 SUPERFAMILY SSF52540 122 320 9.27E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0633 7fbacfed7bf73b0fbc18003b7b7a92df 452 Gene3D G3DSA:3.40.50.300 104 372 1.4E-36 T 14-10-2018 XF_2595 b36ed654e5728c3226dde9aa19c4ed3f 118 Gene3D G3DSA:3.40.30.10 31 116 8.1E-26 T 14-10-2018 XF_2595 b36ed654e5728c3226dde9aa19c4ed3f 118 SUPERFAMILY SSF52833 22 113 9.11E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_2595 b36ed654e5728c3226dde9aa19c4ed3f 118 Pfam PF00462 Glutaredoxin 33 92 3.7E-16 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 XF_2595 b36ed654e5728c3226dde9aa19c4ed3f 118 PRINTS PR00160 Glutaredoxin signature 75 88 4.8E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup XF_2595 b36ed654e5728c3226dde9aa19c4ed3f 118 PRINTS PR00160 Glutaredoxin signature 89 102 4.8E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup XF_2595 b36ed654e5728c3226dde9aa19c4ed3f 118 PRINTS PR00160 Glutaredoxin signature 33 51 4.8E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup XF_2595 b36ed654e5728c3226dde9aa19c4ed3f 118 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 33 111 2.1E-33 T 14-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 XF_2595 b36ed654e5728c3226dde9aa19c4ed3f 118 ProSitePatterns PS00195 Glutaredoxin active site. 35 51 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 XF_1359 4b4828e78c59cf725b2036444a6e830e 387 Pfam PF02628 Cytochrome oxidase assembly protein 137 377 1.1E-45 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 XF_1359 4b4828e78c59cf725b2036444a6e830e 387 Pfam PF02628 Cytochrome oxidase assembly protein 15 122 2.4E-19 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 XF_0863 0c78970cbbeaac4e3bead4dc1b460771 345 Pfam PF00561 alpha/beta hydrolase fold 65 326 9.2E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XF_0863 0c78970cbbeaac4e3bead4dc1b460771 345 SUPERFAMILY SSF53474 47 338 1.85E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0863 0c78970cbbeaac4e3bead4dc1b460771 345 Gene3D G3DSA:3.40.50.1820 43 341 3.8E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0863 0c78970cbbeaac4e3bead4dc1b460771 345 PIRSF PIRSF000443 40 345 2.2E-62 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 XF_2297 778383ffad9b465b22acba8dade9cf4d 156 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 143 156 2.4E-17 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XF_2297 778383ffad9b465b22acba8dade9cf4d 156 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 120 138 2.4E-17 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XF_2297 778383ffad9b465b22acba8dade9cf4d 156 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 7 27 2.4E-17 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XF_2297 778383ffad9b465b22acba8dade9cf4d 156 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 102 119 2.4E-17 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XF_2297 778383ffad9b465b22acba8dade9cf4d 156 Gene3D G3DSA:3.40.50.150 2 155 1.5E-32 T 14-10-2018 XF_2297 778383ffad9b465b22acba8dade9cf4d 156 SUPERFAMILY SSF53335 2 152 5.85E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_2297 778383ffad9b465b22acba8dade9cf4d 156 Pfam PF01555 DNA methylase 99 152 7.1E-15 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XF_2297 778383ffad9b465b22acba8dade9cf4d 156 Pfam PF01555 DNA methylase 2 74 3.2E-7 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XF_1795 f5d6d3151f09f7906a41c70570ceb23e 242 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 7 234 9.5E-20 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 XF_1795 f5d6d3151f09f7906a41c70570ceb23e 242 Pfam PF03309 Type III pantothenate kinase 5 190 2.0E-32 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 XF_1795 f5d6d3151f09f7906a41c70570ceb23e 242 Gene3D G3DSA:3.30.420.490 114 228 6.3E-53 T 14-10-2018 XF_1795 f5d6d3151f09f7906a41c70570ceb23e 242 SUPERFAMILY SSF53067 5 109 7.77E-16 T 14-10-2018 XF_1795 f5d6d3151f09f7906a41c70570ceb23e 242 Gene3D G3DSA:3.30.420.40 5 233 6.3E-53 T 14-10-2018 XF_1795 f5d6d3151f09f7906a41c70570ceb23e 242 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 240 14.342 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 XF_1795 f5d6d3151f09f7906a41c70570ceb23e 242 SUPERFAMILY SSF53067 112 236 5.61E-25 T 14-10-2018 XF_1971 79ef188c66d28ef370283aabe38424d3 103 Pfam PF13698 Domain of unknown function (DUF4156) 21 100 5.7E-11 T 14-10-2018 IPR025294 Protein of unknown function DUF4156 XF_2022 90537f7381d49810ba97c1e332678c7d 494 SMART SM00479 20 213 1.7E-4 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XF_2022 90537f7381d49810ba97c1e332678c7d 494 Pfam PF08411 Exonuclease C-terminal 222 488 1.9E-91 T 14-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 XF_2022 90537f7381d49810ba97c1e332678c7d 494 PIRSF PIRSF000977 13 493 1.0E-176 T 14-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 XF_2022 90537f7381d49810ba97c1e332678c7d 494 Gene3D G3DSA:2.30.30.450 224 364 1.4E-40 T 14-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily XF_2022 90537f7381d49810ba97c1e332678c7d 494 Gene3D G3DSA:3.30.420.10 16 211 4.0E-64 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XF_2022 90537f7381d49810ba97c1e332678c7d 494 Pfam PF00929 Exonuclease 23 201 1.9E-22 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XF_2022 90537f7381d49810ba97c1e332678c7d 494 Gene3D G3DSA:1.20.1280.70 370 430 9.7E-21 T 14-10-2018 XF_2022 90537f7381d49810ba97c1e332678c7d 494 SUPERFAMILY SSF53098 18 487 3.22E-114 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily XF_0956 74dcfc779777b482c3ba7a62733f9eb8 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 201 301 1.6E-5 T 14-10-2018 IPR010918 PurM-like, C-terminal domain XF_0956 74dcfc779777b482c3ba7a62733f9eb8 324 SUPERFAMILY SSF56042 141 305 2.69E-32 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XF_0956 74dcfc779777b482c3ba7a62733f9eb8 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 135 1.1E-20 T 14-10-2018 IPR016188 PurM-like, N-terminal domain XF_0956 74dcfc779777b482c3ba7a62733f9eb8 324 Gene3D G3DSA:3.30.1330.10 1 141 2.4E-42 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XF_0956 74dcfc779777b482c3ba7a62733f9eb8 324 PIRSF PIRSF005303 1 322 1.5E-79 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 XF_0956 74dcfc779777b482c3ba7a62733f9eb8 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 322 2.0E-114 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 XF_0956 74dcfc779777b482c3ba7a62733f9eb8 324 SUPERFAMILY SSF55326 2 135 1.92E-33 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XF_0956 74dcfc779777b482c3ba7a62733f9eb8 324 Gene3D G3DSA:3.90.650.10 143 323 1.6E-47 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XF_0956 74dcfc779777b482c3ba7a62733f9eb8 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 322 26.198 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 XF_1750 ce910001e2dfad19e28aed920bbd108f 378 Pfam PF05448 Acetyl xylan esterase (AXE1) 161 212 1.7E-6 T 14-10-2018 IPR008391 Acetyl xylan esterase XF_1750 ce910001e2dfad19e28aed920bbd108f 378 Gene3D G3DSA:3.40.50.1820 80 358 3.8E-123 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1750 ce910001e2dfad19e28aed920bbd108f 378 Gene3D G3DSA:1.10.10.800 213 303 3.8E-123 T 14-10-2018 XF_1750 ce910001e2dfad19e28aed920bbd108f 378 SUPERFAMILY SSF53474 53 374 1.12E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0785 d255eb4664313e16a135fa34c0144dc2 620 SUPERFAMILY SSF116726 336 414 4.45E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XF_0785 d255eb4664313e16a135fa34c0144dc2 620 Pfam PF03600 Citrate transporter 23 563 5.9E-46 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 XF_0785 d255eb4664313e16a135fa34c0144dc2 620 Gene3D G3DSA:3.30.70.1450 242 317 1.4E-5 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XF_0785 d255eb4664313e16a135fa34c0144dc2 620 Gene3D G3DSA:3.30.70.1450 335 408 4.4E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XF_0785 d255eb4664313e16a135fa34c0144dc2 620 SUPERFAMILY SSF116726 240 313 1.44E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 XF_0785 d255eb4664313e16a135fa34c0144dc2 620 Pfam PF02080 TrkA-C domain 246 315 1.5E-7 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 XF_0785 d255eb4664313e16a135fa34c0144dc2 620 Pfam PF02080 TrkA-C domain 338 404 3.0E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 XF_0744 0e74c45e2d4a2f3a32d333852950ad8f 120 Pfam PF13411 MerR HTH family regulatory protein 21 89 1.1E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XF_0744 0e74c45e2d4a2f3a32d333852950ad8f 120 SUPERFAMILY SSF46955 19 116 5.49E-17 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily XF_0744 0e74c45e2d4a2f3a32d333852950ad8f 120 Gene3D G3DSA:1.10.1660.10 15 90 1.0E-20 T 14-10-2018 XF_0744 0e74c45e2d4a2f3a32d333852950ad8f 120 SMART SM00422 21 91 2.3E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XF_2078 13b3c20881ee2452475cf1dd230277f3 133 Gene3D G3DSA:2.40.10.10 15 129 1.6E-14 T 14-10-2018 XF_2078 13b3c20881ee2452475cf1dd230277f3 133 SUPERFAMILY SSF50494 20 129 9.54E-6 T 14-10-2018 IPR009003 Peptidase S1, PA clan XF_1899 ad49e331c800fde6ed9d1abbef270ee0 144 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 6 138 27.557 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 XF_1899 ad49e331c800fde6ed9d1abbef270ee0 144 TIGRFAM TIGR02801 tolR: protein TolR 13 138 4.2E-40 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 XF_1899 ad49e331c800fde6ed9d1abbef270ee0 144 Gene3D G3DSA:3.30.420.270 58 131 1.2E-12 T 14-10-2018 XF_1899 ad49e331c800fde6ed9d1abbef270ee0 144 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 139 4.5E-26 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 XF_2700 8411fb695a3924f283fea10828e7a2c7 760 Pfam PF03971 Monomeric isocitrate dehydrogenase 23 755 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 XF_2700 8411fb695a3924f283fea10828e7a2c7 760 PIRSF PIRSF009407 17 759 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 XF_2700 8411fb695a3924f283fea10828e7a2c7 760 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 20 756 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 XF_2700 8411fb695a3924f283fea10828e7a2c7 760 SUPERFAMILY SSF53659 21 756 0.0 T 14-10-2018 XF_2700 8411fb695a3924f283fea10828e7a2c7 760 Gene3D G3DSA:3.40.718.10 435 675 3.7E-6 T 14-10-2018 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 4.6E-72 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 Gene3D G3DSA:3.40.190.10 4 208 2.1E-77 T 14-10-2018 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 Gene3D G3DSA:3.40.190.10 101 200 2.1E-77 T 14-10-2018 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 PIRSF PIRSF001438 1 305 6.4E-107 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 SUPERFAMILY SSF54782 218 303 8.76E-20 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 36.2 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 Gene3D G3DSA:3.30.160.40 220 303 1.3E-19 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 SUPERFAMILY SSF53850 3 215 8.9E-78 T 14-10-2018 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 4.6E-11 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 2.0E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 2.0E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 2.0E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 2.0E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 2.0E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_1627 fe8bb88144d350a6dc1de9860d021712 305 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 7.1E-99 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XF_2003 6122729ac4c8010c40fa3b4ec184d01a 77 Pfam PF07793 Protein of unknown function (DUF1631) 1 72 1.1E-13 T 14-10-2018 IPR012434 Protein of unknown function DUF1631 XF_2057 4c20e4a037dc6ea6f514711cec507bf1 53 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 2 36 1.2E-4 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 XF_0909 4dfbd9812d7dc780a365b5e122870a2c 420 SUPERFAMILY SSF81648 294 409 5.76E-26 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 XF_0909 4dfbd9812d7dc780a365b5e122870a2c 420 PIRSF PIRSF038885 8 419 7.2E-140 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 XF_0909 4dfbd9812d7dc780a365b5e122870a2c 420 Pfam PF00033 Cytochrome b/b6/petB 32 219 1.8E-66 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 XF_0909 4dfbd9812d7dc780a365b5e122870a2c 420 SUPERFAMILY SSF81342 24 293 6.44E-87 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 XF_0909 4dfbd9812d7dc780a365b5e122870a2c 420 Gene3D G3DSA:1.20.810.10 6 419 1.5E-133 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 XF_0909 4dfbd9812d7dc780a365b5e122870a2c 420 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 291 394 4.3E-33 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 XF_2019 6675cc2c4b6271ae5ef6a7597031281a 565 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 27 561 1.0E-126 T 14-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 XF_2019 6675cc2c4b6271ae5ef6a7597031281a 565 Pfam PF00999 Sodium/hydrogen exchanger family 31 439 4.9E-65 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 XF_2144 9941a139c5778bf4bc8fd696cc6c9a3d 267 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_2144 9941a139c5778bf4bc8fd696cc6c9a3d 267 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 21 267 1.1E-118 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 XF_2144 9941a139c5778bf4bc8fd696cc6c9a3d 267 SUPERFAMILY SSF52540 21 254 2.27E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2144 9941a139c5778bf4bc8fd696cc6c9a3d 267 SMART SM00382 45 248 6.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_2144 9941a139c5778bf4bc8fd696cc6c9a3d 267 Gene3D G3DSA:3.40.50.300 20 265 9.1E-68 T 14-10-2018 XF_2144 9941a139c5778bf4bc8fd696cc6c9a3d 267 Pfam PF00005 ABC transporter 36 192 7.4E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_2723 257999e035b86b11a235fc7d90fed7a2 424 Gene3D G3DSA:3.40.50.150 2 143 4.7E-32 T 14-10-2018 XF_2723 257999e035b86b11a235fc7d90fed7a2 424 Pfam PF02384 N-6 DNA Methylase 9 129 4.7E-19 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 XF_2723 257999e035b86b11a235fc7d90fed7a2 424 SUPERFAMILY SSF53335 4 200 4.57E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0384 d36c9dbc00b64caa60cbc2160baf2869 681 Gene3D G3DSA:2.170.130.10 64 182 8.7E-27 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XF_0384 d36c9dbc00b64caa60cbc2160baf2869 681 Pfam PF00593 TonB dependent receptor 240 678 5.3E-34 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XF_0384 d36c9dbc00b64caa60cbc2160baf2869 681 SUPERFAMILY SSF56935 55 681 4.76E-83 T 14-10-2018 XF_0384 d36c9dbc00b64caa60cbc2160baf2869 681 Gene3D G3DSA:2.40.170.20 188 681 3.2E-47 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XF_0384 d36c9dbc00b64caa60cbc2160baf2869 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 173 2.2E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain XF_1725 3e2d9754f0c0f63c4a21e7e43eb66cb2 82 Gene3D G3DSA:3.30.429.10 1 55 3.5E-12 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily XF_1725 3e2d9754f0c0f63c4a21e7e43eb66cb2 82 SUPERFAMILY SSF55331 2 74 2.83E-14 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily XF_1725 3e2d9754f0c0f63c4a21e7e43eb66cb2 82 Pfam PF01361 Tautomerase enzyme 2 59 7.6E-19 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 XF_1725 3e2d9754f0c0f63c4a21e7e43eb66cb2 82 PIRSF PIRSF037799 1 81 8.6E-33 T 14-10-2018 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 XF_1677 9a120f96cdca243c7f6ac4c1d828dc2b 93 Gene3D G3DSA:1.10.260.40 11 93 3.7E-25 T 14-10-2018 XF_1677 9a120f96cdca243c7f6ac4c1d828dc2b 93 SUPERFAMILY SSF47413 19 89 1.13E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_1677 9a120f96cdca243c7f6ac4c1d828dc2b 93 Pfam PF13744 Helix-turn-helix domain 14 89 7.2E-24 T 14-10-2018 IPR039554 HigA2-like, helix-turn-helix domain XF_1572 9a120f96cdca243c7f6ac4c1d828dc2b 93 Gene3D G3DSA:1.10.260.40 11 93 3.7E-25 T 14-10-2018 XF_1572 9a120f96cdca243c7f6ac4c1d828dc2b 93 SUPERFAMILY SSF47413 19 89 1.13E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_1572 9a120f96cdca243c7f6ac4c1d828dc2b 93 Pfam PF13744 Helix-turn-helix domain 14 89 7.2E-24 T 14-10-2018 IPR039554 HigA2-like, helix-turn-helix domain XF_1174 a9e994091f0238af32f3ddc0cfe30862 130 Gene3D G3DSA:3.30.420.80 2 130 2.5E-51 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 XF_1174 a9e994091f0238af32f3ddc0cfe30862 130 SUPERFAMILY SSF53137 17 130 2.55E-45 T 14-10-2018 XF_1174 a9e994091f0238af32f3ddc0cfe30862 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 31.734 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 XF_1174 a9e994091f0238af32f3ddc0cfe30862 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site XF_1174 a9e994091f0238af32f3ddc0cfe30862 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 1.7E-52 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1174 a9e994091f0238af32f3ddc0cfe30862 130 PIRSF PIRSF002131 1 130 5.8E-51 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 XF_1174 a9e994091f0238af32f3ddc0cfe30862 130 Pfam PF00411 Ribosomal protein S11 20 129 1.0E-48 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 XF_0446 a9866cfb8be0f65744a5faf0e621ae3d 124 SUPERFAMILY SSF81273 80 122 5.89E-12 T 14-10-2018 XF_0446 a9866cfb8be0f65744a5faf0e621ae3d 124 Gene3D G3DSA:4.10.430.10 70 124 1.8E-16 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 XF_0446 a9866cfb8be0f65744a5faf0e621ae3d 124 Pfam PF00816 H-NS histone family 13 115 1.4E-20 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 XF_0446 a9866cfb8be0f65744a5faf0e621ae3d 124 SMART SM00528 74 121 7.5E-12 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 XF_0968 4a3c1b7af647022eb13aa3e2386d56c2 277 Gene3D G3DSA:1.10.443.10 123 277 4.6E-17 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XF_0968 4a3c1b7af647022eb13aa3e2386d56c2 277 Pfam PF00589 Phage integrase family 128 276 3.1E-10 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XF_0968 4a3c1b7af647022eb13aa3e2386d56c2 277 SUPERFAMILY SSF56349 22 277 1.24E-21 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XF_1400 bd484eed0d89194e2debabae05359ee3 71 Gene3D G3DSA:1.10.357.20 20 70 6.6E-9 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain XF_1400 bd484eed0d89194e2debabae05359ee3 71 SUPERFAMILY SSF161093 28 69 1.83E-9 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 XF_2539 af1b2bbfc0465e6178733c68ddeaa736 148 SUPERFAMILY SSF54523 7 144 5.76E-25 T 14-10-2018 XF_2539 af1b2bbfc0465e6178733c68ddeaa736 148 Pfam PF00114 Pilin (bacterial filament) 35 144 2.3E-23 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XF_2539 af1b2bbfc0465e6178733c68ddeaa736 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 8.0E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_2539 af1b2bbfc0465e6178733c68ddeaa736 148 Gene3D G3DSA:3.30.700.10 7 145 1.1E-27 T 14-10-2018 XF_2539 af1b2bbfc0465e6178733c68ddeaa736 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 2.6E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0133 1bf01a356eee1d714032d042f85ee4d4 324 Pfam PF05275 Copper resistance protein B precursor (CopB) 124 324 1.4E-66 T 14-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 XF_1440 f883043d7e15865f5a1aa784fa2540e6 379 Gene3D G3DSA:3.40.50.620 1 208 5.5E-87 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_1440 f883043d7e15865f5a1aa784fa2540e6 379 SUPERFAMILY SSF52402 3 240 1.35E-49 T 14-10-2018 XF_1440 f883043d7e15865f5a1aa784fa2540e6 379 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 357 36.371 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 XF_1440 f883043d7e15865f5a1aa784fa2540e6 379 Pfam PF03054 tRNA methyl transferase 5 356 2.1E-128 T 14-10-2018 XF_1440 f883043d7e15865f5a1aa784fa2540e6 379 Gene3D G3DSA:2.30.30.280 209 276 7.3E-22 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 XF_1440 f883043d7e15865f5a1aa784fa2540e6 379 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 356 3.4E-126 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 XF_1440 f883043d7e15865f5a1aa784fa2540e6 379 Gene3D G3DSA:2.40.30.10 279 362 1.1E-25 T 14-10-2018 XF_2490 3572f5ac7e32f2b3f9928df825eabd30 100 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 5 99 1.1E-34 T 14-10-2018 IPR031451 mRNA interferase toxin MqsR GO:0009372|GO:0017148|GO:0044010 XF_2490 3572f5ac7e32f2b3f9928df825eabd30 100 Gene3D G3DSA:3.30.2310.40 1 100 8.1E-38 T 14-10-2018 IPR038493 Toxin MqsR superfamily XF_1976 c19261b45eec559c5a37bbbd475983d3 437 Gene3D G3DSA:3.30.1490.20 121 190 1.2E-24 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XF_1976 c19261b45eec559c5a37bbbd475983d3 437 SUPERFAMILY SSF51246 329 424 7.85E-28 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 XF_1976 c19261b45eec559c5a37bbbd475983d3 437 Gene3D G3DSA:3.90.600.10 331 434 1.1E-28 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XF_1976 c19261b45eec559c5a37bbbd475983d3 437 SUPERFAMILY SSF52440 1 103 4.46E-35 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XF_1976 c19261b45eec559c5a37bbbd475983d3 437 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 8.0E-34 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XF_1976 c19261b45eec559c5a37bbbd475983d3 437 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 41.336 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XF_1976 c19261b45eec559c5a37bbbd475983d3 437 Gene3D G3DSA:3.40.50.20 2 95 2.4E-36 T 14-10-2018 XF_1976 c19261b45eec559c5a37bbbd475983d3 437 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.6E-77 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XF_1976 c19261b45eec559c5a37bbbd475983d3 437 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 4.2E-25 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XF_1976 c19261b45eec559c5a37bbbd475983d3 437 SUPERFAMILY SSF56059 104 323 1.63E-64 T 14-10-2018 XF_1976 c19261b45eec559c5a37bbbd475983d3 437 Gene3D G3DSA:3.30.470.20 191 329 4.4E-57 T 14-10-2018 XF_1976 c19261b45eec559c5a37bbbd475983d3 437 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XF_1976 c19261b45eec559c5a37bbbd475983d3 437 SMART SM01209 103 296 2.4E-132 T 14-10-2018 XF_1976 c19261b45eec559c5a37bbbd475983d3 437 SMART SM01210 330 423 1.9E-45 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XF_1976 c19261b45eec559c5a37bbbd475983d3 437 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.1E-164 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XF_0256 1cd3ceded45a50e54f35d5f36428cff5 295 Pfam PF00483 Nucleotidyl transferase 5 240 7.1E-65 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XF_0256 1cd3ceded45a50e54f35d5f36428cff5 295 Gene3D G3DSA:3.90.550.10 1 294 1.7E-77 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_0256 1cd3ceded45a50e54f35d5f36428cff5 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 290 1.6E-155 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 XF_0256 1cd3ceded45a50e54f35d5f36428cff5 295 SUPERFAMILY SSF53448 4 289 8.34E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_2721 14aa218579cb33394a682571df2f0677 1025 Pfam PF04851 Type III restriction enzyme, res subunit 297 495 4.7E-12 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XF_2721 14aa218579cb33394a682571df2f0677 1025 SUPERFAMILY SSF52540 279 501 2.2E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2721 14aa218579cb33394a682571df2f0677 1025 Gene3D G3DSA:3.40.50.300 635 748 2.4E-20 T 14-10-2018 XF_2721 14aa218579cb33394a682571df2f0677 1025 Gene3D G3DSA:3.40.50.300 295 455 4.7E-24 T 14-10-2018 XF_2721 14aa218579cb33394a682571df2f0677 1025 Gene3D G3DSA:3.90.1570.50 121 280 3.9E-8 T 14-10-2018 XF_2721 14aa218579cb33394a682571df2f0677 1025 SMART SM00487 292 519 1.0E-11 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XF_2721 14aa218579cb33394a682571df2f0677 1025 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 137 225 3.3E-15 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 XF_2721 14aa218579cb33394a682571df2f0677 1025 SUPERFAMILY SSF52540 317 750 7.77E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0287 7a1ef9ace2e259efc902ee3866be2a8d 569 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 548 1.1E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XF_0287 7a1ef9ace2e259efc902ee3866be2a8d 569 Pfam PF00501 AMP-binding enzyme 37 465 6.2E-108 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XF_0287 7a1ef9ace2e259efc902ee3866be2a8d 569 ProSitePatterns PS00455 Putative AMP-binding domain signature. 213 224 - T 14-10-2018 IPR020845 AMP-binding, conserved site XF_0287 7a1ef9ace2e259efc902ee3866be2a8d 569 Gene3D G3DSA:3.30.300.310 461 562 3.6E-29 T 14-10-2018 XF_0287 7a1ef9ace2e259efc902ee3866be2a8d 569 SUPERFAMILY SSF56801 23 558 6.54E-147 T 14-10-2018 XF_0287 7a1ef9ace2e259efc902ee3866be2a8d 569 Gene3D G3DSA:3.40.50.12780 16 456 2.6E-116 T 14-10-2018 XF_0408 6dc601fcd08a6d6c0b61747b2eb6a1a7 509 PIRSF PIRSF006060 44 507 3.6E-81 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XF_0408 6dc601fcd08a6d6c0b61747b2eb6a1a7 509 Gene3D G3DSA:1.20.1740.10 56 506 1.9E-108 T 14-10-2018 XF_0408 6dc601fcd08a6d6c0b61747b2eb6a1a7 509 Pfam PF13520 Amino acid permease 58 468 4.9E-52 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XF_0631 51d510edd99572fb610967a601f63aa9 413 Pfam PF00589 Phage integrase family 245 348 1.3E-9 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XF_0631 51d510edd99572fb610967a601f63aa9 413 Gene3D G3DSA:3.30.160.390 3 92 1.7E-7 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily XF_0631 51d510edd99572fb610967a601f63aa9 413 Gene3D G3DSA:1.10.150.130 93 206 2.9E-10 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal XF_0631 51d510edd99572fb610967a601f63aa9 413 Gene3D G3DSA:1.10.443.10 221 391 2.9E-19 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XF_0631 51d510edd99572fb610967a601f63aa9 413 SUPERFAMILY SSF56349 97 386 4.0E-40 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XF_0631 51d510edd99572fb610967a601f63aa9 413 Pfam PF13356 Arm DNA-binding domain 4 91 6.3E-15 T 14-10-2018 IPR025166 Integrase, DNA-binding domain XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 Pfam PF01301 Glycosyl hydrolases family 35 34 352 3.8E-117 T 14-10-2018 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 548 564 7.0E-48 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 114 133 7.0E-48 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 38 55 7.0E-48 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 169 184 7.0E-48 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 321 337 7.0E-48 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 59 77 7.0E-48 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 255 270 7.0E-48 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 Gene3D G3DSA:3.20.20.80 26 295 5.2E-100 T 14-10-2018 XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 ProSitePatterns PS01182 Glycosyl hydrolases family 35 putative active site. 171 183 - T 14-10-2018 IPR019801 Glycoside hydrolase, family 35, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 Gene3D G3DSA:2.60.120.260 296 589 2.0E-90 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 SUPERFAMILY SSF51445 28 352 2.08E-94 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 Gene3D G3DSA:2.60.120.260 375 506 2.0E-90 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 PIRSF PIRSF006336 14 604 1.2E-176 T 14-10-2018 IPR026283 Beta-galactosidase 1-like GO:0004565 XF_0840 288ab61d2ab6a3abc36f01aa9460a1bd 612 SUPERFAMILY SSF49785 466 593 3.83E-20 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily XF_0538 2b198b5166bbb959f8811e401ab547a2 186 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 9.4E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0538 2b198b5166bbb959f8811e401ab547a2 186 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.8E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0538 2b198b5166bbb959f8811e401ab547a2 186 Pfam PF00114 Pilin (bacterial filament) 35 175 9.0E-22 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XF_0538 2b198b5166bbb959f8811e401ab547a2 186 SUPERFAMILY SSF54523 7 178 5.23E-23 T 14-10-2018 XF_0538 2b198b5166bbb959f8811e401ab547a2 186 Gene3D G3DSA:3.30.700.10 7 176 1.4E-21 T 14-10-2018 XF_2359 54727835052206c9759415d46a84db67 236 Gene3D G3DSA:1.20.120.160 138 236 8.6E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 XF_2359 54727835052206c9759415d46a84db67 236 SMART SM00448 10 117 1.1E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2359 54727835052206c9759415d46a84db67 236 Pfam PF00072 Response regulator receiver domain 13 118 1.7E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_2359 54727835052206c9759415d46a84db67 236 Pfam PF01627 Hpt domain 161 234 1.2E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XF_2359 54727835052206c9759415d46a84db67 236 Gene3D G3DSA:3.40.50.2300 5 130 1.1E-19 T 14-10-2018 XF_2359 54727835052206c9759415d46a84db67 236 SUPERFAMILY SSF47226 103 222 1.96E-12 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 XF_2359 54727835052206c9759415d46a84db67 236 SUPERFAMILY SSF52172 10 129 1.1E-22 T 14-10-2018 IPR011006 CheY-like superfamily XF_1563 b160644a71e393dfcb3bdf6afcd7ab8a 112 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 28 105 1.2E-22 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system XF_0501 df67014164eb22cf9fe5d46cce4fad50 104 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 13 77 4.9E-32 T 14-10-2018 IPR031856 Putative bacterial antitoxin YdaS XF_0501 df67014164eb22cf9fe5d46cce4fad50 104 Gene3D G3DSA:1.10.260.40 11 72 7.9E-25 T 14-10-2018 XF_0501 df67014164eb22cf9fe5d46cce4fad50 104 SUPERFAMILY SSF47413 13 74 4.41E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_0228 ddb846f347f12391ccead1fb511b43aa 172 SUPERFAMILY SSF55083 14 160 7.85E-49 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XF_0228 ddb846f347f12391ccead1fb511b43aa 172 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 16 145 2.0E-33 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XF_0228 ddb846f347f12391ccead1fb511b43aa 172 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 101 112 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XF_0228 ddb846f347f12391ccead1fb511b43aa 172 Gene3D G3DSA:3.30.70.560 13 169 3.8E-50 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XF_0228 ddb846f347f12391ccead1fb511b43aa 172 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 15 145 2.7E-45 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XF_1047 3a92b89049b89e54cb895fd923ec7df4 434 SUPERFAMILY SSF50156 200 278 4.07E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 XF_1047 3a92b89049b89e54cb895fd923ec7df4 434 SMART SM00228 199 269 5.7E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 XF_1047 3a92b89049b89e54cb895fd923ec7df4 434 SMART SM00228 106 175 0.21 T 14-10-2018 IPR001478 PDZ domain GO:0005515 XF_1047 3a92b89049b89e54cb895fd923ec7df4 434 Pfam PF02163 Peptidase family M50 2 422 1.4E-76 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 XF_1047 3a92b89049b89e54cb895fd923ec7df4 434 Gene3D G3DSA:2.30.42.10 211 293 1.3E-12 T 14-10-2018 XF_1047 3a92b89049b89e54cb895fd923ec7df4 434 SUPERFAMILY SSF50156 78 173 4.34E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 XF_1047 3a92b89049b89e54cb895fd923ec7df4 434 Gene3D G3DSA:2.30.42.10 123 206 2.3E-8 T 14-10-2018 XF_1047 3a92b89049b89e54cb895fd923ec7df4 434 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 433 4.4E-101 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 XF_1239 31215bd694a11ef87fda32026d01efa5 135 Pfam PF03237 Terminase-like family 4 124 3.4E-17 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type XF_0061 abaae0b7af0e2bd05589ed869dd7c4fb 359 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 43 186 1.4E-27 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 XF_0061 abaae0b7af0e2bd05589ed869dd7c4fb 359 Gene3D G3DSA:1.10.10.730 131 184 1.9E-7 T 14-10-2018 XF_0061 abaae0b7af0e2bd05589ed869dd7c4fb 359 SUPERFAMILY SSF110849 46 182 5.06E-25 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily XF_0061 abaae0b7af0e2bd05589ed869dd7c4fb 359 Pfam PF02195 ParB-like nuclease domain 44 137 5.0E-13 T 14-10-2018 IPR003115 ParB/Sulfiredoxin XF_0061 abaae0b7af0e2bd05589ed869dd7c4fb 359 Pfam PF08535 KorB domain 164 247 8.7E-5 T 14-10-2018 IPR013741 Repressor KorB domain XF_0061 abaae0b7af0e2bd05589ed869dd7c4fb 359 Gene3D G3DSA:3.90.1530.30 57 123 4.6E-10 T 14-10-2018 XF_0061 abaae0b7af0e2bd05589ed869dd7c4fb 359 SMART SM00470 43 137 5.1E-19 T 14-10-2018 IPR003115 ParB/Sulfiredoxin XF_0207 6bf0fd9e7edae4ca00151e5441f8def3 125 Gene3D G3DSA:1.10.287.110 50 125 1.2E-14 T 14-10-2018 IPR036869 Chaperone J-domain superfamily XF_0207 6bf0fd9e7edae4ca00151e5441f8def3 125 PRINTS PR00625 DnaJ domain signature 104 124 2.8E-9 T 14-10-2018 IPR001623 DnaJ domain XF_0207 6bf0fd9e7edae4ca00151e5441f8def3 125 PRINTS PR00625 DnaJ domain signature 82 97 2.8E-9 T 14-10-2018 IPR001623 DnaJ domain XF_0207 6bf0fd9e7edae4ca00151e5441f8def3 125 PRINTS PR00625 DnaJ domain signature 64 82 2.8E-9 T 14-10-2018 IPR001623 DnaJ domain XF_0207 6bf0fd9e7edae4ca00151e5441f8def3 125 SUPERFAMILY SSF46565 57 121 9.81E-20 T 14-10-2018 IPR036869 Chaperone J-domain superfamily XF_0207 6bf0fd9e7edae4ca00151e5441f8def3 125 Pfam PF00226 DnaJ domain 62 119 1.1E-11 T 14-10-2018 IPR001623 DnaJ domain XF_0207 6bf0fd9e7edae4ca00151e5441f8def3 125 SMART SM00271 61 124 5.1E-13 T 14-10-2018 IPR001623 DnaJ domain XF_1384 38956b7e5ec868e3c0c128620a7157ad 513 SUPERFAMILY SSF53474 225 389 3.2E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1384 38956b7e5ec868e3c0c128620a7157ad 513 Pfam PF10142 PhoPQ-activated pathogenicity-related protein 64 437 1.5E-138 T 14-10-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type XF_1384 38956b7e5ec868e3c0c128620a7157ad 513 Gene3D G3DSA:3.40.50.1820 175 390 5.2E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1384 38956b7e5ec868e3c0c128620a7157ad 513 PIRSF PIRSF014728 11 513 1.1E-256 T 14-10-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type XF_2497 6771544a7679aee87930b316ef5e8576 626 Pfam PF05065 Phage capsid family 357 623 2.6E-50 T 14-10-2018 IPR024455 Phage capsid XF_2497 6771544a7679aee87930b316ef5e8576 626 Pfam PF04586 Caudovirus prohead serine protease 69 163 7.9E-6 T 14-10-2018 IPR006433 Prohead protease XF_2497 6771544a7679aee87930b316ef5e8576 626 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 335 622 1.6E-30 T 14-10-2018 IPR024455 Phage capsid XF_2497 6771544a7679aee87930b316ef5e8576 626 SUPERFAMILY SSF56563 354 623 4.58E-42 T 14-10-2018 XF_0714 6771544a7679aee87930b316ef5e8576 626 Pfam PF05065 Phage capsid family 357 623 2.6E-50 T 14-10-2018 IPR024455 Phage capsid XF_0714 6771544a7679aee87930b316ef5e8576 626 Pfam PF04586 Caudovirus prohead serine protease 69 163 7.9E-6 T 14-10-2018 IPR006433 Prohead protease XF_0714 6771544a7679aee87930b316ef5e8576 626 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 335 622 1.6E-30 T 14-10-2018 IPR024455 Phage capsid XF_0714 6771544a7679aee87930b316ef5e8576 626 SUPERFAMILY SSF56563 354 623 4.58E-42 T 14-10-2018 XF_0855 e9fe3cde9cd1cabb944a652784022556 242 SUPERFAMILY SSF51261 47 239 1.99E-40 T 14-10-2018 IPR011055 Duplicated hybrid motif XF_0855 e9fe3cde9cd1cabb944a652784022556 242 Gene3D G3DSA:3.10.350.10 31 102 1.2E-15 T 14-10-2018 IPR036779 LysM domain superfamily XF_0855 e9fe3cde9cd1cabb944a652784022556 242 Pfam PF01476 LysM domain 48 88 2.8E-13 T 14-10-2018 IPR018392 LysM domain XF_0855 e9fe3cde9cd1cabb944a652784022556 242 Pfam PF01551 Peptidase family M23 148 235 6.2E-23 T 14-10-2018 IPR016047 Peptidase M23 XF_0855 e9fe3cde9cd1cabb944a652784022556 242 Gene3D G3DSA:2.70.70.10 115 240 5.6E-28 T 14-10-2018 IPR011055 Duplicated hybrid motif XF_0855 e9fe3cde9cd1cabb944a652784022556 242 SMART SM00257 46 90 6.9E-12 T 14-10-2018 IPR018392 LysM domain XF_0567 91bd64d36a80d26b0fba5de74edb61de 254 Gene3D G3DSA:3.30.2010.10 153 248 1.2E-15 T 14-10-2018 XF_0567 91bd64d36a80d26b0fba5de74edb61de 254 Pfam PF01863 Protein of unknown function DUF45 33 236 2.5E-50 T 14-10-2018 IPR002725 Protein of unknown function DUF45 XF_0105 83c6670f701d6d9ee1c2f5e0b2f0cc60 448 Gene3D G3DSA:3.40.50.2000 243 423 1.2E-62 T 14-10-2018 XF_0105 83c6670f701d6d9ee1c2f5e0b2f0cc60 448 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 54 231 2.0E-62 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 XF_0105 83c6670f701d6d9ee1c2f5e0b2f0cc60 448 Gene3D G3DSA:3.40.50.11720 52 229 4.0E-45 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 XF_0105 83c6670f701d6d9ee1c2f5e0b2f0cc60 448 SUPERFAMILY SSF53756 77 422 4.29E-15 T 14-10-2018 XF_0652 40d47f4eb913073f36afcb5b79ad110b 159 Gene3D G3DSA:3.10.50.40 3 153 1.2E-49 T 14-10-2018 XF_0652 40d47f4eb913073f36afcb5b79ad110b 159 Gene3D G3DSA:2.40.10.330 71 120 1.2E-49 T 14-10-2018 XF_0652 40d47f4eb913073f36afcb5b79ad110b 159 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 135 1.2E-9 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XF_0652 40d47f4eb913073f36afcb5b79ad110b 159 SUPERFAMILY SSF54534 2 139 1.36E-33 T 14-10-2018 XF_0820 6082ba66c5893bdf1b27fbe82fe5fa08 529 SUPERFAMILY SSF53187 2 503 2.39E-62 T 14-10-2018 XF_0820 6082ba66c5893bdf1b27fbe82fe5fa08 529 Pfam PF02225 PA domain 110 195 1.8E-7 T 14-10-2018 IPR003137 PA domain XF_0820 6082ba66c5893bdf1b27fbe82fe5fa08 529 Gene3D G3DSA:3.40.630.10 225 503 1.1E-49 T 14-10-2018 XF_0820 6082ba66c5893bdf1b27fbe82fe5fa08 529 SUPERFAMILY SSF52025 110 193 5.62E-8 T 14-10-2018 XF_0820 6082ba66c5893bdf1b27fbe82fe5fa08 529 Pfam PF04389 Peptidase family M28 277 492 4.9E-48 T 14-10-2018 IPR007484 Peptidase M28 XF_1415 aadde9057381fcdf2d853bd4c17c53b7 425 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 423 8.2E-174 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_1415 aadde9057381fcdf2d853bd4c17c53b7 425 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 414 2.3E-108 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 XF_1415 aadde9057381fcdf2d853bd4c17c53b7 425 Gene3D G3DSA:3.65.10.10 21 236 6.0E-166 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XF_1415 aadde9057381fcdf2d853bd4c17c53b7 425 SUPERFAMILY SSF55205 1 424 5.89E-139 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 XF_1415 aadde9057381fcdf2d853bd4c17c53b7 425 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 424 44.836 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XF_1415 aadde9057381fcdf2d853bd4c17c53b7 425 Gene3D G3DSA:3.65.10.10 6 421 6.0E-166 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XF_0895 8d4102a27ff7d97cb102aed09c8384d0 283 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 283 9.3E-139 T 14-10-2018 IPR008487 Protein of unknown function DUF769 XF_2050 652537155631da910179b4bdffe8e7fc 158 Pfam PF07283 Conjugal transfer protein TrbH 33 158 3.9E-54 T 14-10-2018 IPR010837 Conjugal transfer, TrbH XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 Pfam PF01341 Glycosyl hydrolases family 6 43 395 1.6E-98 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 SUPERFAMILY SSF49384 598 683 8.37E-20 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 SMART SM00637 602 682 2.6E-20 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 Gene3D G3DSA:2.60.40.290 597 683 3.8E-18 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 Gene3D G3DSA:3.20.20.40 20 443 3.3E-156 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 349 369 1.2E-33 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 104 117 1.2E-33 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 205 218 1.2E-33 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 50 69 1.2E-33 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 245 255 1.2E-33 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 138 153 1.2E-33 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 309 322 1.2E-33 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 372 386 1.2E-33 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 SUPERFAMILY SSF51989 21 443 3.14E-115 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 XF_1267 626283a41ea05d9ee3eba8c9e59669be 683 Pfam PF00553 Cellulose binding domain 605 682 7.5E-15 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 XF_0185 5a354b5477a5f0e563a925edc7335fc1 337 Pfam PF01145 SPFH domain / Band 7 family 44 213 6.3E-31 T 14-10-2018 IPR001107 Band 7 domain XF_0185 5a354b5477a5f0e563a925edc7335fc1 337 PRINTS PR00721 Stomatin signature 150 173 1.7E-25 T 14-10-2018 IPR001972 Stomatin family GO:0016020 XF_0185 5a354b5477a5f0e563a925edc7335fc1 337 PRINTS PR00721 Stomatin signature 174 192 1.7E-25 T 14-10-2018 IPR001972 Stomatin family GO:0016020 XF_0185 5a354b5477a5f0e563a925edc7335fc1 337 PRINTS PR00721 Stomatin signature 193 214 1.7E-25 T 14-10-2018 IPR001972 Stomatin family GO:0016020 XF_0185 5a354b5477a5f0e563a925edc7335fc1 337 PRINTS PR00721 Stomatin signature 95 116 1.7E-25 T 14-10-2018 IPR001972 Stomatin family GO:0016020 XF_0185 5a354b5477a5f0e563a925edc7335fc1 337 PRINTS PR00721 Stomatin signature 130 147 1.7E-25 T 14-10-2018 IPR001972 Stomatin family GO:0016020 XF_0185 5a354b5477a5f0e563a925edc7335fc1 337 Gene3D G3DSA:3.30.479.30 69 200 3.0E-39 T 14-10-2018 XF_0185 5a354b5477a5f0e563a925edc7335fc1 337 SMART SM00244 40 198 8.6E-46 T 14-10-2018 IPR001107 Band 7 domain XF_0185 5a354b5477a5f0e563a925edc7335fc1 337 SUPERFAMILY SSF117892 71 205 2.09E-35 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily XF_0185 5a354b5477a5f0e563a925edc7335fc1 337 Pfam PF16200 C-terminal region of band_7 260 316 2.9E-9 T 14-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 XF_0674 eff2988a8d68da99efd9106f195987d9 452 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 97 443 1.3E-126 T 14-10-2018 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I XF_0674 eff2988a8d68da99efd9106f195987d9 452 PRINTS PR00095 Anthranilate synthase component I signature 289 302 2.8E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_0674 eff2988a8d68da99efd9106f195987d9 452 PRINTS PR00095 Anthranilate synthase component I signature 383 397 2.8E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_0674 eff2988a8d68da99efd9106f195987d9 452 PRINTS PR00095 Anthranilate synthase component I signature 303 316 2.8E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_0674 eff2988a8d68da99efd9106f195987d9 452 PRINTS PR00095 Anthranilate synthase component I signature 398 412 2.8E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_0674 eff2988a8d68da99efd9106f195987d9 452 Gene3D G3DSA:3.60.120.10 1 451 3.9E-153 T 14-10-2018 IPR005801 ADC synthase GO:0009058 XF_0674 eff2988a8d68da99efd9106f195987d9 452 Pfam PF00425 chorismate binding enzyme 189 441 1.1E-87 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal XF_0674 eff2988a8d68da99efd9106f195987d9 452 SUPERFAMILY SSF56322 5 449 3.27E-120 T 14-10-2018 IPR005801 ADC synthase GO:0009058 XF_0674 eff2988a8d68da99efd9106f195987d9 452 Pfam PF04715 Anthranilate synthase component I, N terminal region 16 141 2.1E-4 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XF_2259 d2abd949a1bfef5bb0d447158babf0c0 524 SMART SM00564 62 94 0.13 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XF_2259 d2abd949a1bfef5bb0d447158babf0c0 524 SMART SM00564 155 198 760.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XF_2259 d2abd949a1bfef5bb0d447158babf0c0 524 SMART SM00564 107 142 12.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XF_2259 d2abd949a1bfef5bb0d447158babf0c0 524 SMART SM00564 15 46 0.032 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XF_2259 d2abd949a1bfef5bb0d447158babf0c0 524 SMART SM00564 324 355 0.094 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XF_2259 d2abd949a1bfef5bb0d447158babf0c0 524 SMART SM00564 223 254 520.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XF_2259 d2abd949a1bfef5bb0d447158babf0c0 524 SMART SM00564 255 307 12.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XF_2259 d2abd949a1bfef5bb0d447158babf0c0 524 Pfam PF13360 PQQ-like domain 3 167 3.2E-17 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat XF_2259 d2abd949a1bfef5bb0d447158babf0c0 524 Pfam PF13360 PQQ-like domain 291 387 7.6E-11 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat XF_2259 d2abd949a1bfef5bb0d447158babf0c0 524 SUPERFAMILY SSF50998 271 384 6.87E-17 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XF_2259 d2abd949a1bfef5bb0d447158babf0c0 524 Gene3D G3DSA:2.40.128.630 288 394 1.3E-15 T 14-10-2018 XF_2259 d2abd949a1bfef5bb0d447158babf0c0 524 SUPERFAMILY SSF50998 2 281 4.71E-37 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XF_2259 d2abd949a1bfef5bb0d447158babf0c0 524 Gene3D G3DSA:2.130.10.10 1 287 2.8E-37 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 XF_2772 e9437601c6149046f854f0db84345fad 140 Gene3D G3DSA:1.10.3510.10 1 137 6.0E-14 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_2772 e9437601c6149046f854f0db84345fad 140 Pfam PF04591 Protein of unknown function, DUF596 68 139 9.5E-24 T 14-10-2018 IPR007670 Protein of unknown function DUF596 XF_2772 e9437601c6149046f854f0db84345fad 140 SUPERFAMILY SSF160472 19 132 1.57E-35 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_1888 079cc2ecb0860d8df11c0e132640a527 629 Gene3D G3DSA:3.20.20.540 231 544 4.5E-152 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 XF_1888 079cc2ecb0860d8df11c0e132640a527 629 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 160 613 98.346 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 XF_1888 079cc2ecb0860d8df11c0e132640a527 629 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 160 612 7.1E-208 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 XF_1888 079cc2ecb0860d8df11c0e132640a527 629 Pfam PF01964 Radical SAM ThiC family 161 609 2.2E-198 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 XF_1888 079cc2ecb0860d8df11c0e132640a527 629 Pfam PF13667 ThiC-associated domain 52 125 5.3E-27 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 XF_1124 b67be8935659aed964887a6173a49332 199 Hamap MF_00528 Septum formation protein Maf [maf]. 11 199 29.105 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 XF_1124 b67be8935659aed964887a6173a49332 199 TIGRFAM TIGR00172 maf: septum formation protein Maf 11 193 7.8E-48 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 XF_1124 b67be8935659aed964887a6173a49332 199 Pfam PF02545 Maf-like protein 12 195 3.4E-49 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 XF_1124 b67be8935659aed964887a6173a49332 199 Gene3D G3DSA:3.90.950.10 11 199 1.2E-58 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XF_1124 b67be8935659aed964887a6173a49332 199 SUPERFAMILY SSF52972 10 194 7.85E-54 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XF_1124 b67be8935659aed964887a6173a49332 199 PIRSF PIRSF006305 4 199 2.8E-46 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 XF_0671 87fe5263807662f52cbd11cd53e12d20 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 2.4E-63 T 14-10-2018 XF_0671 87fe5263807662f52cbd11cd53e12d20 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 245 1.5E-97 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XF_0671 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.6E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0671 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.6E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0671 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.6E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0671 87fe5263807662f52cbd11cd53e12d20 247 Gene3D G3DSA:3.40.50.720 1 247 2.1E-80 T 14-10-2018 XF_0671 87fe5263807662f52cbd11cd53e12d20 247 SUPERFAMILY SSF51735 6 246 3.16E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0671 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 9.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0671 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 9.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0671 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0671 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 9.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0671 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 9.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0671 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 9.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0671 87fe5263807662f52cbd11cd53e12d20 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XF_0671 87fe5263807662f52cbd11cd53e12d20 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 185 9.3E-4 T 14-10-2018 XF_2538 4e35424ace7b89ded642ef6f991a0998 490 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 250 278 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 XF_2538 4e35424ace7b89ded642ef6f991a0998 490 Gene3D G3DSA:1.20.81.30 342 452 7.0E-27 T 14-10-2018 XF_2538 4e35424ace7b89ded642ef6f991a0998 490 PRINTS PR00812 Bacterial general secretion pathway protein F signature 151 163 1.4E-17 T 14-10-2018 IPR003004 GspF/PilC family XF_2538 4e35424ace7b89ded642ef6f991a0998 490 PRINTS PR00812 Bacterial general secretion pathway protein F signature 470 489 1.4E-17 T 14-10-2018 IPR003004 GspF/PilC family XF_2538 4e35424ace7b89ded642ef6f991a0998 490 PRINTS PR00812 Bacterial general secretion pathway protein F signature 250 278 1.4E-17 T 14-10-2018 IPR003004 GspF/PilC family XF_2538 4e35424ace7b89ded642ef6f991a0998 490 PRINTS PR00812 Bacterial general secretion pathway protein F signature 454 468 1.4E-17 T 14-10-2018 IPR003004 GspF/PilC family XF_2538 4e35424ace7b89ded642ef6f991a0998 490 Gene3D G3DSA:1.20.81.30 142 257 1.1E-30 T 14-10-2018 XF_2538 4e35424ace7b89ded642ef6f991a0998 490 Pfam PF00482 Type II secretion system (T2SS), protein F 359 481 8.4E-29 T 14-10-2018 IPR018076 Type II secretion system F domain XF_2538 4e35424ace7b89ded642ef6f991a0998 490 Pfam PF00482 Type II secretion system (T2SS), protein F 155 278 1.6E-31 T 14-10-2018 IPR018076 Type II secretion system F domain XF_1077 d0ee63a51e7070a3e5467099fe75a795 227 SUPERFAMILY SSF52540 1 223 2.0E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1077 d0ee63a51e7070a3e5467099fe75a795 227 SMART SM00382 30 218 8.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1077 d0ee63a51e7070a3e5467099fe75a795 227 Gene3D G3DSA:3.40.50.300 1 227 1.3E-58 T 14-10-2018 XF_1077 d0ee63a51e7070a3e5467099fe75a795 227 Pfam PF00005 ABC transporter 22 169 1.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_1077 d0ee63a51e7070a3e5467099fe75a795 227 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_1077 d0ee63a51e7070a3e5467099fe75a795 227 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 1 220 1.4E-104 T 14-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 XF_2075 4f83cb46929a84965af11157b9d6533d 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 42 7.4E-12 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 XF_2075 4f83cb46929a84965af11157b9d6533d 92 Gene3D G3DSA:1.10.1220.10 10 51 1.3E-7 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XF_2075 4f83cb46929a84965af11157b9d6533d 92 SUPERFAMILY SSF47598 4 44 6.89E-12 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XF_0178 c4b993594a6d50576b776817b75c80b8 257 Pfam PF05433 Glycine zipper 2TM domain 104 144 3.5E-9 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 XF_0961 44b2bae693a20ebd8e2502464e7bcdc5 159 Gene3D G3DSA:3.40.30.10 1 159 2.5E-47 T 14-10-2018 XF_0961 44b2bae693a20ebd8e2502464e7bcdc5 159 SUPERFAMILY SSF52833 23 156 2.85E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_0961 44b2bae693a20ebd8e2502464e7bcdc5 159 PIRSF PIRSF000239 5 159 1.1E-24 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XF_0961 44b2bae693a20ebd8e2502464e7bcdc5 159 Pfam PF00578 AhpC/TSA family 24 135 1.1E-27 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XF_0672 ec915f4931fa21a3a86043a4da1cb063 85 Gene3D G3DSA:1.10.1200.10 2 84 1.2E-27 T 14-10-2018 IPR036736 ACP-like superfamily XF_0672 ec915f4931fa21a3a86043a4da1cb063 85 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 7 82 5.3E-32 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 XF_0672 ec915f4931fa21a3a86043a4da1cb063 85 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 47 79 2.0E-12 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 XF_0672 ec915f4931fa21a3a86043a4da1cb063 85 Pfam PF00550 Phosphopantetheine attachment site 13 79 4.8E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain XF_0672 ec915f4931fa21a3a86043a4da1cb063 85 ProSitePatterns PS00012 Phosphopantetheine attachment site. 38 53 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site XF_0672 ec915f4931fa21a3a86043a4da1cb063 85 Hamap MF_01217 Acyl carrier protein [acpP]. 9 83 21.103 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 XF_0672 ec915f4931fa21a3a86043a4da1cb063 85 SUPERFAMILY SSF47336 6 82 3.14E-21 T 14-10-2018 IPR036736 ACP-like superfamily XF_1903 34c42fe5e522d4cdb18e8eedea9c8328 634 Pfam PF02705 K+ potassium transporter 23 555 9.4E-215 T 14-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 XF_1903 34c42fe5e522d4cdb18e8eedea9c8328 634 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 14 634 33.326 T 14-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup XF_1858 044dbe482fb214eb7a9c347f77198108 254 Pfam PF06508 Queuosine biosynthesis protein QueC 27 236 6.7E-74 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XF_1858 044dbe482fb214eb7a9c347f77198108 254 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 28 229 9.8E-58 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XF_1858 044dbe482fb214eb7a9c347f77198108 254 Gene3D G3DSA:3.40.50.620 24 247 2.2E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_1858 044dbe482fb214eb7a9c347f77198108 254 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 26 242 55.967 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XF_1858 044dbe482fb214eb7a9c347f77198108 254 PIRSF PIRSF006293 24 249 1.1E-80 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XF_1858 044dbe482fb214eb7a9c347f77198108 254 SUPERFAMILY SSF52402 25 245 1.87E-60 T 14-10-2018 XF_1940 3cef6f7f19e7384c069ade1c6622d66c 216 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 47 201 4.8E-60 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XF_1940 3cef6f7f19e7384c069ade1c6622d66c 216 Gene3D G3DSA:3.30.1060.10 7 216 2.4E-81 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XF_1940 3cef6f7f19e7384c069ade1c6622d66c 216 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 45 207 36.658 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XF_1940 3cef6f7f19e7384c069ade1c6622d66c 216 Pfam PF01625 Peptide methionine sulfoxide reductase 48 201 1.2E-61 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XF_1940 3cef6f7f19e7384c069ade1c6622d66c 216 SUPERFAMILY SSF55068 13 212 6.28E-74 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XF_2042 92b6f0b9daf9b84067fdc447198cdadd 242 Gene3D G3DSA:3.40.630.30 62 191 2.6E-8 T 14-10-2018 XF_2042 92b6f0b9daf9b84067fdc447198cdadd 242 SUPERFAMILY SSF55729 91 192 1.88E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase XF_1171 f7a9866ebd3d108189a4bcd11585e194 149 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 7 149 15.628 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 XF_1171 f7a9866ebd3d108189a4bcd11585e194 149 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 6 147 4.2E-39 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1171 f7a9866ebd3d108189a4bcd11585e194 149 Gene3D G3DSA:3.100.10.10 76 149 3.0E-6 T 14-10-2018 XF_1171 f7a9866ebd3d108189a4bcd11585e194 149 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 32 147 3.6E-22 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P XF_1171 f7a9866ebd3d108189a4bcd11585e194 149 SUPERFAMILY SSF52080 8 147 2.22E-33 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily XF_2779 d31aa3f0a33718d53fad350049a0f7bc 903 SUPERFAMILY SSF52129 471 700 3.98E-17 T 14-10-2018 IPR029030 Caspase-like domain superfamily XF_2779 d31aa3f0a33718d53fad350049a0f7bc 903 Gene3D G3DSA:3.20.20.370 221 450 6.4E-51 T 14-10-2018 XF_2779 d31aa3f0a33718d53fad350049a0f7bc 903 SUPERFAMILY SSF88713 236 447 5.68E-47 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XF_2779 d31aa3f0a33718d53fad350049a0f7bc 903 Pfam PF01522 Polysaccharide deacetylase 250 382 4.7E-27 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XF_2779 d31aa3f0a33718d53fad350049a0f7bc 903 ProSitePatterns PS00018 EF-hand calcium-binding domain. 671 683 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site XF_2779 d31aa3f0a33718d53fad350049a0f7bc 903 Pfam PF00656 Caspase domain 477 670 7.5E-23 T 14-10-2018 XF_2779 d31aa3f0a33718d53fad350049a0f7bc 903 Gene3D G3DSA:3.40.50.1460 474 707 5.9E-32 T 14-10-2018 XF_2779 d31aa3f0a33718d53fad350049a0f7bc 903 SUPERFAMILY SSF48452 770 892 6.32E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2779 d31aa3f0a33718d53fad350049a0f7bc 903 Gene3D G3DSA:1.25.40.10 785 899 8.9E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_1702 533885cbf98c66afce734d2265314194 101 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 6 95 1.7E-33 T 14-10-2018 IPR014057 Uncharacterized protein HI1420 XF_1702 533885cbf98c66afce734d2265314194 101 Pfam PF01381 Helix-turn-helix 50 93 5.4E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_1702 533885cbf98c66afce734d2265314194 101 SUPERFAMILY SSF47413 36 94 3.66E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_1702 533885cbf98c66afce734d2265314194 101 SMART SM00530 43 96 0.006 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_1702 533885cbf98c66afce734d2265314194 101 Gene3D G3DSA:1.10.260.40 40 100 7.4E-6 T 14-10-2018 XF_2631 aa90b72f3b0fcfbb45ca0933c0775781 132 ProSitePatterns PS00055 Ribosomal protein S12 signature. 51 58 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2631 aa90b72f3b0fcfbb45ca0933c0775781 132 PRINTS PR01034 Ribosomal protein S12 signature 66 85 1.5E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2631 aa90b72f3b0fcfbb45ca0933c0775781 132 PRINTS PR01034 Ribosomal protein S12 signature 102 118 1.5E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2631 aa90b72f3b0fcfbb45ca0933c0775781 132 PRINTS PR01034 Ribosomal protein S12 signature 50 65 1.5E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2631 aa90b72f3b0fcfbb45ca0933c0775781 132 PRINTS PR01034 Ribosomal protein S12 signature 35 50 1.5E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2631 aa90b72f3b0fcfbb45ca0933c0775781 132 PRINTS PR01034 Ribosomal protein S12 signature 118 130 1.5E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2631 aa90b72f3b0fcfbb45ca0933c0775781 132 PRINTS PR01034 Ribosomal protein S12 signature 85 102 1.5E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2631 aa90b72f3b0fcfbb45ca0933c0775781 132 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 9 131 38.451 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2631 aa90b72f3b0fcfbb45ca0933c0775781 132 Gene3D G3DSA:2.40.50.140 7 132 2.6E-61 T 14-10-2018 XF_2631 aa90b72f3b0fcfbb45ca0933c0775781 132 PIRSF PIRSF002133 9 132 1.8E-53 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2631 aa90b72f3b0fcfbb45ca0933c0775781 132 Pfam PF00164 Ribosomal protein S12/S23 21 131 4.2E-40 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2631 aa90b72f3b0fcfbb45ca0933c0775781 132 SUPERFAMILY SSF50249 11 131 2.14E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2631 aa90b72f3b0fcfbb45ca0933c0775781 132 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 9 131 8.3E-68 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2585 abf81a54678e17b8fc0844f5692b70f9 218 Gene3D G3DSA:3.40.50.150 3 209 5.3E-40 T 14-10-2018 XF_2585 abf81a54678e17b8fc0844f5692b70f9 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 174 2.2E-26 T 14-10-2018 XF_2585 abf81a54678e17b8fc0844f5692b70f9 218 SUPERFAMILY SSF53335 4 185 4.96E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0938 364267f6e49523a5bc956febd6cadef7 297 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 18 262 3.9E-80 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD XF_0938 364267f6e49523a5bc956febd6cadef7 297 Pfam PF13525 Outer membrane lipoprotein 44 249 3.6E-57 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like XF_0938 364267f6e49523a5bc956febd6cadef7 297 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 13 256 36.007 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD XF_0938 364267f6e49523a5bc956febd6cadef7 297 Gene3D G3DSA:1.25.40.10 45 266 1.9E-54 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_0938 364267f6e49523a5bc956febd6cadef7 297 SUPERFAMILY SSF48452 46 170 2.8E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2551 692ef79243236ad6135fe22630278d25 891 Pfam PF00326 Prolyl oligopeptidase family 719 876 1.2E-21 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 XF_2551 692ef79243236ad6135fe22630278d25 891 SUPERFAMILY SSF82171 165 549 1.33E-9 T 14-10-2018 XF_2551 692ef79243236ad6135fe22630278d25 891 Gene3D G3DSA:3.40.50.1820 617 883 9.5E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_2551 692ef79243236ad6135fe22630278d25 891 SUPERFAMILY SSF53474 622 876 8.24E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 SMART SM00865 211 329 2.7E-53 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 Pfam PF12327 FtsZ family, C-terminal domain 226 320 1.5E-37 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 ProSitePatterns PS01135 FtsZ protein signature 2. 101 122 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 SUPERFAMILY SSF52490 17 212 1.57E-68 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 SMART SM00864 17 209 1.2E-110 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 335 2.4E-129 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 Gene3D G3DSA:3.40.50.1440 7 224 6.6E-80 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 PRINTS PR00423 Cell division protein FtsZ signature 130 151 4.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 PRINTS PR00423 Cell division protein FtsZ signature 193 215 4.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 PRINTS PR00423 Cell division protein FtsZ signature 102 122 4.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 PRINTS PR00423 Cell division protein FtsZ signature 216 237 4.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 Gene3D G3DSA:3.30.1330.20 225 337 1.0E-34 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 13 359 37.387 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 SUPERFAMILY SSF55307 208 322 2.98E-42 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 XF_0802 6eb21bff99f4726d0cff175d8ef9ce7a 413 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 18 176 3.1E-39 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XF_a0047 c1beae51287f8ae01208327b3b8144db 463 Pfam PF03432 Relaxase/Mobilisation nuclease domain 58 208 8.5E-9 T 14-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 XF_a0047 c1beae51287f8ae01208327b3b8144db 463 Gene3D G3DSA:3.30.930.30 45 221 1.7E-8 T 14-10-2018 XF_1624 b5fe0b36d21691308fb11ea1ee42dc23 224 SUPERFAMILY SSF53474 13 219 1.26E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1624 b5fe0b36d21691308fb11ea1ee42dc23 224 Pfam PF02230 Phospholipase/Carboxylesterase 14 217 1.2E-43 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 XF_1624 b5fe0b36d21691308fb11ea1ee42dc23 224 Gene3D G3DSA:3.40.50.1820 3 220 2.9E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_2032 aa50726b75182497f424ff65b6f508bd 102 Gene3D G3DSA:3.30.2310.20 1 98 1.4E-19 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XF_2032 aa50726b75182497f424ff65b6f508bd 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 92 1.8E-10 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XF_0729 d7a1bd461538833be4e425c2b4083e5c 95 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 20 93 8.3E-14 T 14-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative XF_0458 3ce1910c168a100162462089bca2047c 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.616 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XF_0458 3ce1910c168a100162462089bca2047c 141 SMART SM00562 3 140 7.4E-80 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XF_0458 3ce1910c168a100162462089bca2047c 141 SUPERFAMILY SSF54919 1 138 2.75E-54 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XF_0458 3ce1910c168a100162462089bca2047c 141 Gene3D G3DSA:3.30.70.141 1 140 1.2E-53 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XF_0458 3ce1910c168a100162462089bca2047c 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XF_0458 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 5.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XF_0458 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 5.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XF_0458 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 5.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XF_0458 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 5.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XF_0458 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 5.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XF_0458 3ce1910c168a100162462089bca2047c 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.6E-52 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XF_0566 6b5501366bda652e0476e62c4001ea45 337 Pfam PF00762 Ferrochelatase 24 335 5.7E-100 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XF_0566 6b5501366bda652e0476e62c4001ea45 337 SUPERFAMILY SSF53800 22 336 2.49E-92 T 14-10-2018 XF_0566 6b5501366bda652e0476e62c4001ea45 337 Gene3D G3DSA:3.40.50.1400 180 317 2.5E-87 T 14-10-2018 XF_0566 6b5501366bda652e0476e62c4001ea45 337 ProSitePatterns PS00534 Ferrochelatase signature. 206 224 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XF_0566 6b5501366bda652e0476e62c4001ea45 337 TIGRFAM TIGR00109 hemH: ferrochelatase 22 332 1.8E-88 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XF_0566 6b5501366bda652e0476e62c4001ea45 337 Gene3D G3DSA:3.40.50.1400 24 335 2.5E-87 T 14-10-2018 XF_0566 6b5501366bda652e0476e62c4001ea45 337 Hamap MF_00323 Ferrochelatase [hemH]. 22 336 35.77 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XF_0412 a67752826a01363b3ab6a3b9f9978644 433 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_0412 a67752826a01363b3ab6a3b9f9978644 433 Pfam PF00005 ABC transporter 33 168 3.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_0412 a67752826a01363b3ab6a3b9f9978644 433 SUPERFAMILY SSF52540 12 243 2.9E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0412 a67752826a01363b3ab6a3b9f9978644 433 Pfam PF09821 C-terminal AAA-associated domain 304 421 8.7E-42 T 14-10-2018 IPR018632 C-terminal AAA-associated domain XF_0412 a67752826a01363b3ab6a3b9f9978644 433 SMART SM00382 42 220 7.9E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_0412 a67752826a01363b3ab6a3b9f9978644 433 Gene3D G3DSA:3.40.50.300 10 245 2.5E-57 T 14-10-2018 XF_2525 f5a318175c53db53760b661c3e1b30d8 726 SUPERFAMILY SSF53098 30 179 2.55E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily XF_2525 f5a318175c53db53760b661c3e1b30d8 726 Gene3D G3DSA:3.30.420.10 6 193 4.8E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XF_2525 f5a318175c53db53760b661c3e1b30d8 726 SUPERFAMILY SSF56672 187 724 5.56E-67 T 14-10-2018 XF_2525 f5a318175c53db53760b661c3e1b30d8 726 Pfam PF00476 DNA polymerase family A 267 498 6.7E-10 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_2525 f5a318175c53db53760b661c3e1b30d8 726 SMART SM00482 372 690 9.3E-7 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XF_1438 89e97af22e3815889d8be3a34e21ab36 245 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 2 230 3.8E-11 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase XF_1438 89e97af22e3815889d8be3a34e21ab36 245 SUPERFAMILY SSF56219 1 241 2.22E-29 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XF_1438 89e97af22e3815889d8be3a34e21ab36 245 Gene3D G3DSA:3.60.10.10 1 242 1.4E-33 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XF_1464 a31c278c5c67afdc1312dd102cfb9e6b 332 Gene3D G3DSA:3.40.50.10490 190 317 3.4E-40 T 14-10-2018 XF_1464 a31c278c5c67afdc1312dd102cfb9e6b 332 SUPERFAMILY SSF53697 2 330 8.27E-69 T 14-10-2018 XF_1464 a31c278c5c67afdc1312dd102cfb9e6b 332 Pfam PF01380 SIS domain 194 274 2.7E-15 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XF_1464 a31c278c5c67afdc1312dd102cfb9e6b 332 Pfam PF01380 SIS domain 39 160 3.5E-17 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XF_1464 a31c278c5c67afdc1312dd102cfb9e6b 332 Gene3D G3DSA:3.40.50.10490 1 185 4.1E-42 T 14-10-2018 XF_1638 1f7cff5cdac34ab9e09f4be10df2f3b9 274 SUPERFAMILY SSF53448 10 220 2.73E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_1638 1f7cff5cdac34ab9e09f4be10df2f3b9 274 Pfam PF00535 Glycosyl transferase family 2 13 137 2.1E-21 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XF_1638 1f7cff5cdac34ab9e09f4be10df2f3b9 274 Gene3D G3DSA:3.90.550.10 7 252 8.1E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_2159 46605e3da8d6f4c564e921ae799d62ca 218 Gene3D G3DSA:3.40.50.150 34 167 1.7E-8 T 14-10-2018 XF_2159 46605e3da8d6f4c564e921ae799d62ca 218 PIRSF PIRSF028445 3 218 3.7E-127 T 14-10-2018 IPR016885 Uncharacterised conserved protein UCP028445 XF_2159 46605e3da8d6f4c564e921ae799d62ca 218 SUPERFAMILY SSF53335 65 178 2.96E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_1923 b70bc6263e149202b7a587c3b27326f1 348 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 55 348 3.0E-97 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 XF_1923 b70bc6263e149202b7a587c3b27326f1 348 Gene3D G3DSA:3.40.50.10800 137 346 1.3E-111 T 14-10-2018 XF_1923 b70bc6263e149202b7a587c3b27326f1 348 Hamap MF_00568 Quinolinate synthase A [nadA]. 52 348 43.677 T 14-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 XF_1923 b70bc6263e149202b7a587c3b27326f1 348 Gene3D G3DSA:3.40.50.10800 57 329 1.3E-111 T 14-10-2018 XF_1923 b70bc6263e149202b7a587c3b27326f1 348 Gene3D G3DSA:3.40.50.10800 220 304 1.3E-111 T 14-10-2018 XF_1923 b70bc6263e149202b7a587c3b27326f1 348 Pfam PF02445 Quinolinate synthetase A protein 57 347 8.9E-113 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 XF_1923 b70bc6263e149202b7a587c3b27326f1 348 SUPERFAMILY SSF142754 55 347 4.84E-110 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 XF_2716 2743b3618df8b897ea0034b399952f40 296 SUPERFAMILY SSF51735 1 248 2.1E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2716 2743b3618df8b897ea0034b399952f40 296 Gene3D G3DSA:3.40.50.720 1 287 1.8E-67 T 14-10-2018 XF_2716 2743b3618df8b897ea0034b399952f40 296 Pfam PF00106 short chain dehydrogenase 7 213 2.8E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2716 2743b3618df8b897ea0034b399952f40 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2716 2743b3618df8b897ea0034b399952f40 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2716 2743b3618df8b897ea0034b399952f40 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 5.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2716 2743b3618df8b897ea0034b399952f40 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 5.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1086 8b61f0b66fc6cb54d5210c2beb8c9dd5 190 SMART SM00867 24 184 1.6E-16 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XF_1086 8b61f0b66fc6cb54d5210c2beb8c9dd5 190 Pfam PF04264 YceI-like domain 26 180 9.0E-16 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XF_1086 8b61f0b66fc6cb54d5210c2beb8c9dd5 190 Gene3D G3DSA:2.40.128.110 25 181 3.4E-17 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XF_1086 8b61f0b66fc6cb54d5210c2beb8c9dd5 190 SUPERFAMILY SSF101874 22 184 1.44E-23 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XF_0268 82b3c30cead20e5abe47fba2a0b1f6d5 395 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 27 385 4.5E-135 T 14-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB XF_0268 82b3c30cead20e5abe47fba2a0b1f6d5 395 Gene3D G3DSA:1.20.1250.20 16 205 1.8E-8 T 14-10-2018 XF_0268 82b3c30cead20e5abe47fba2a0b1f6d5 395 SUPERFAMILY SSF103473 17 382 2.35E-32 T 14-10-2018 IPR036259 MFS transporter superfamily XF_0268 82b3c30cead20e5abe47fba2a0b1f6d5 395 Gene3D G3DSA:1.20.1250.20 212 391 3.5E-15 T 14-10-2018 XF_0381 4a609b79c32900205e848cad2b7228d1 861 SUPERFAMILY SSF52540 546 858 1.3E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0381 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:3.40.50.300 550 767 1.9E-86 T 14-10-2018 XF_0381 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:1.10.8.60 769 861 4.1E-27 T 14-10-2018 XF_0381 4a609b79c32900205e848cad2b7228d1 861 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 763 1.8E-55 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XF_0381 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:1.10.1780.10 1 147 1.0E-30 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XF_0381 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:3.40.50.300 148 342 6.6E-74 T 14-10-2018 XF_0381 4a609b79c32900205e848cad2b7228d1 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 2.0E-9 T 14-10-2018 IPR004176 Clp, N-terminal XF_0381 4a609b79c32900205e848cad2b7228d1 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.6E-11 T 14-10-2018 IPR004176 Clp, N-terminal XF_0381 4a609b79c32900205e848cad2b7228d1 861 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 5.6E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XF_0381 4a609b79c32900205e848cad2b7228d1 861 SMART SM01086 769 858 8.0E-36 T 14-10-2018 IPR019489 Clp ATPase, C-terminal XF_0381 4a609b79c32900205e848cad2b7228d1 861 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 XF_0381 4a609b79c32900205e848cad2b7228d1 861 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 XF_0381 4a609b79c32900205e848cad2b7228d1 861 SUPERFAMILY SSF52540 159 545 3.28E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0381 4a609b79c32900205e848cad2b7228d1 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.2E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 XF_0381 4a609b79c32900205e848cad2b7228d1 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.2E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 XF_0381 4a609b79c32900205e848cad2b7228d1 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.2E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 XF_0381 4a609b79c32900205e848cad2b7228d1 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.2E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 XF_0381 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:3.40.50.300 343 544 1.4E-69 T 14-10-2018 XF_0381 4a609b79c32900205e848cad2b7228d1 861 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 849 5.8E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal XF_0381 4a609b79c32900205e848cad2b7228d1 861 SUPERFAMILY SSF81923 4 156 5.3E-37 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XF_0381 4a609b79c32900205e848cad2b7228d1 861 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 XF_0381 4a609b79c32900205e848cad2b7228d1 861 SMART SM00382 198 344 2.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_0381 4a609b79c32900205e848cad2b7228d1 861 SMART SM00382 597 770 1.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_2279 46b645a877e1225d2bb7cd00f194898d 342 SUPERFAMILY SSF51735 20 336 5.83E-91 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2279 46b645a877e1225d2bb7cd00f194898d 342 Gene3D G3DSA:3.90.25.10 197 331 4.0E-94 T 14-10-2018 XF_2279 46b645a877e1225d2bb7cd00f194898d 342 PRINTS PR01713 Nucleotide sugar epimerase signature 233 248 3.1E-23 T 14-10-2018 XF_2279 46b645a877e1225d2bb7cd00f194898d 342 PRINTS PR01713 Nucleotide sugar epimerase signature 259 274 3.1E-23 T 14-10-2018 XF_2279 46b645a877e1225d2bb7cd00f194898d 342 PRINTS PR01713 Nucleotide sugar epimerase signature 48 64 3.1E-23 T 14-10-2018 XF_2279 46b645a877e1225d2bb7cd00f194898d 342 PRINTS PR01713 Nucleotide sugar epimerase signature 298 315 3.1E-23 T 14-10-2018 XF_2279 46b645a877e1225d2bb7cd00f194898d 342 Gene3D G3DSA:3.40.50.720 23 319 4.0E-94 T 14-10-2018 XF_2279 46b645a877e1225d2bb7cd00f194898d 342 Pfam PF01370 NAD dependent epimerase/dehydratase family 22 265 5.3E-60 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 XF_2782 269d48511a0cb00282a8dac1612ab7ad 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 46 8.2E-26 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2782 269d48511a0cb00282a8dac1612ab7ad 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 16.576 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2782 269d48511a0cb00282a8dac1612ab7ad 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2782 269d48511a0cb00282a8dac1612ab7ad 46 Pfam PF00468 Ribosomal protein L34 3 46 7.8E-26 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2782 269d48511a0cb00282a8dac1612ab7ad 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 28 7.0E-8 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0675 fe0e22f2194133cb7109c6dbaa7f1295 350 Gene3D G3DSA:3.30.160.60 307 345 3.5E-13 T 14-10-2018 XF_0675 fe0e22f2194133cb7109c6dbaa7f1295 350 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 31 341 2.8E-71 T 14-10-2018 IPR003770 Endolytic murein transglycosylase XF_0675 fe0e22f2194133cb7109c6dbaa7f1295 350 Pfam PF02618 YceG-like family 45 333 1.2E-72 T 14-10-2018 IPR003770 Endolytic murein transglycosylase XF_0675 fe0e22f2194133cb7109c6dbaa7f1295 350 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 1 338 31.227 T 14-10-2018 IPR003770 Endolytic murein transglycosylase XF_0464 d0e5db021cb897a1ac109fa2a1cb0d2f 407 SMART SM00564 168 199 2.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XF_0464 d0e5db021cb897a1ac109fa2a1cb0d2f 407 SMART SM00564 212 244 0.54 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XF_0464 d0e5db021cb897a1ac109fa2a1cb0d2f 407 SMART SM00564 72 103 0.0039 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XF_0464 d0e5db021cb897a1ac109fa2a1cb0d2f 407 SMART SM00564 264 295 0.66 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XF_0464 d0e5db021cb897a1ac109fa2a1cb0d2f 407 SMART SM00564 127 159 7.2E-6 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XF_0464 d0e5db021cb897a1ac109fa2a1cb0d2f 407 SMART SM00564 301 333 52.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XF_0464 d0e5db021cb897a1ac109fa2a1cb0d2f 407 Pfam PF13360 PQQ-like domain 123 332 1.1E-42 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat XF_0464 d0e5db021cb897a1ac109fa2a1cb0d2f 407 Pfam PF01011 PQQ enzyme repeat 77 103 2.1E-4 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat XF_0464 d0e5db021cb897a1ac109fa2a1cb0d2f 407 Gene3D G3DSA:2.130.10.10 30 406 2.2E-92 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 XF_0464 d0e5db021cb897a1ac109fa2a1cb0d2f 407 SUPERFAMILY SSF50998 38 395 1.19E-75 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XF_0464 d0e5db021cb897a1ac109fa2a1cb0d2f 407 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 1 405 36.162 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB XF_0464 d0e5db021cb897a1ac109fa2a1cb0d2f 407 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 404 3.7E-118 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB XF_1995 f27330f94dbd116f4fa9127098c6ab94 423 Pfam PF04932 O-Antigen ligase 191 346 3.2E-14 T 14-10-2018 IPR007016 O-antigen ligase-related XF_1645 76b4f324b90fb0250197b9305b9e3300 315 Pfam PF02498 BRO family, N-terminal domain 122 218 2.4E-8 T 14-10-2018 IPR003497 BRO N-terminal domain XF_1645 76b4f324b90fb0250197b9305b9e3300 315 SMART SM01040 120 217 1.1E-20 T 14-10-2018 IPR003497 BRO N-terminal domain XF_1737 5979db0f10c57a595c5102efe343c8c6 242 SUPERFAMILY SSF51735 33 227 1.27E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1737 5979db0f10c57a595c5102efe343c8c6 242 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 34 125 1.2E-19 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal XF_1737 5979db0f10c57a595c5102efe343c8c6 242 Gene3D G3DSA:3.40.50.720 30 224 5.4E-44 T 14-10-2018 XF_0146 c8d1441e708d7069e526dd6a686845cf 252 SUPERFAMILY SSF110997 176 250 9.81E-17 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XF_0146 c8d1441e708d7069e526dd6a686845cf 252 Pfam PF05036 Sporulation related domain 177 249 3.5E-15 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 XF_0146 c8d1441e708d7069e526dd6a686845cf 252 Gene3D G3DSA:3.30.70.1070 171 252 6.9E-18 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XF_2328 4059bdd666cf770afb3063982f358cbc 394 Pfam PF12679 ABC-2 family transporter protein 8 356 1.4E-23 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 XF_2090 6bf4b9065ba1ad1f97c255fd3538d417 259 Hamap MF_00361 NAD kinase [nadK]. 9 258 21.243 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 XF_2090 6bf4b9065ba1ad1f97c255fd3538d417 259 Pfam PF01513 ATP-NAD kinase 38 221 5.8E-15 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 XF_2090 6bf4b9065ba1ad1f97c255fd3538d417 259 SUPERFAMILY SSF111331 29 246 1.31E-55 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily XF_2090 6bf4b9065ba1ad1f97c255fd3538d417 259 Gene3D G3DSA:3.40.50.10330 34 236 2.5E-38 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 XF_2090 6bf4b9065ba1ad1f97c255fd3538d417 259 Gene3D G3DSA:2.60.200.30 100 234 2.5E-38 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 XF_0176 58d24a2ce54f8bc6e247e95c07eb030d 378 Gene3D G3DSA:3.90.550.10 37 246 2.1E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_0176 58d24a2ce54f8bc6e247e95c07eb030d 378 Pfam PF00535 Glycosyl transferase family 2 48 210 9.7E-25 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XF_0176 58d24a2ce54f8bc6e247e95c07eb030d 378 SUPERFAMILY SSF53448 47 301 3.56E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_0880 463b7b48e2e415d4d8d282eca5d5d421 220 Pfam PF00484 Carbonic anhydrase 37 188 2.1E-49 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XF_0880 463b7b48e2e415d4d8d282eca5d5d421 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XF_0880 463b7b48e2e415d4d8d282eca5d5d421 220 SMART SM00947 30 193 1.6E-66 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XF_0880 463b7b48e2e415d4d8d282eca5d5d421 220 SUPERFAMILY SSF53056 2 212 6.41E-77 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 XF_0880 463b7b48e2e415d4d8d282eca5d5d421 220 Gene3D G3DSA:3.40.1050.10 1 209 1.6E-80 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 XF_0880 463b7b48e2e415d4d8d282eca5d5d421 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XF_1844 7a6cddb3fffdb146ccacb40baa4af2ba 492 Gene3D G3DSA:1.10.3430.10 65 492 6.5E-137 T 14-10-2018 IPR029020 Ammonium/urea transporter XF_1844 7a6cddb3fffdb146ccacb40baa4af2ba 492 ProSitePatterns PS01219 Ammonium transporters signature. 246 271 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 XF_1844 7a6cddb3fffdb146ccacb40baa4af2ba 492 TIGRFAM TIGR00836 amt: ammonium transporter 88 490 2.7E-129 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 XF_1844 7a6cddb3fffdb146ccacb40baa4af2ba 492 Pfam PF00909 Ammonium Transporter Family 90 490 4.4E-117 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 XF_1844 7a6cddb3fffdb146ccacb40baa4af2ba 492 SUPERFAMILY SSF111352 84 471 9.68E-124 T 14-10-2018 XF_0326 4e09fb4aee760ca29da31c2e01bc4d6f 324 Pfam PF01385 Probable transposase 153 267 4.7E-24 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 XF_0326 4e09fb4aee760ca29da31c2e01bc4d6f 324 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 238 306 7.3E-7 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal XF_0326 4e09fb4aee760ca29da31c2e01bc4d6f 324 Pfam PF07282 Putative transposase DNA-binding domain 281 321 9.1E-9 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal XF_1746 5f2de8c3d7f44505351477dc47c6ea21 349 SMART SM00829 13 342 1.5E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XF_1746 5f2de8c3d7f44505351477dc47c6ea21 349 Gene3D G3DSA:3.40.50.720 159 314 2.6E-132 T 14-10-2018 XF_1746 5f2de8c3d7f44505351477dc47c6ea21 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XF_1746 5f2de8c3d7f44505351477dc47c6ea21 349 SUPERFAMILY SSF50129 5 171 8.65E-48 T 14-10-2018 IPR011032 GroES-like superfamily XF_1746 5f2de8c3d7f44505351477dc47c6ea21 349 Pfam PF00107 Zinc-binding dehydrogenase 185 308 2.2E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XF_1746 5f2de8c3d7f44505351477dc47c6ea21 349 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 178 205 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XF_1746 5f2de8c3d7f44505351477dc47c6ea21 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 142 1.1E-26 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XF_1746 5f2de8c3d7f44505351477dc47c6ea21 349 Gene3D G3DSA:3.90.180.10 12 342 2.6E-132 T 14-10-2018 XF_1746 5f2de8c3d7f44505351477dc47c6ea21 349 SUPERFAMILY SSF51735 151 312 9.01E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2599 56e8b359faf528039f4443ce67978a10 433 Gene3D G3DSA:3.40.720.10 40 406 4.2E-119 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XF_2599 56e8b359faf528039f4443ce67978a10 433 Gene3D G3DSA:3.30.1360.180 253 355 4.2E-119 T 14-10-2018 XF_2599 56e8b359faf528039f4443ce67978a10 433 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 40 353 4.5E-72 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 XF_2599 56e8b359faf528039f4443ce67978a10 433 SUPERFAMILY SSF53649 27 398 9.49E-82 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 XF_2341 412123debde33661a7a536b662d2d884 200 Gene3D G3DSA:2.30.22.10 142 198 3.5E-22 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 XF_2341 412123debde33661a7a536b662d2d884 200 SUPERFAMILY SSF51064 145 199 4.05E-18 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 XF_2341 412123debde33661a7a536b662d2d884 200 Pfam PF01025 GrpE 39 198 2.2E-45 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XF_2341 412123debde33661a7a536b662d2d884 200 PRINTS PR00773 GrpE protein signature 150 165 4.4E-23 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XF_2341 412123debde33661a7a536b662d2d884 200 PRINTS PR00773 GrpE protein signature 98 113 4.4E-23 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XF_2341 412123debde33661a7a536b662d2d884 200 PRINTS PR00773 GrpE protein signature 70 86 4.4E-23 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XF_2341 412123debde33661a7a536b662d2d884 200 PRINTS PR00773 GrpE protein signature 177 196 4.4E-23 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XF_2341 412123debde33661a7a536b662d2d884 200 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XF_2341 412123debde33661a7a536b662d2d884 200 Hamap MF_01151 Protein GrpE [grpE]. 31 198 19.169 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XF_2341 412123debde33661a7a536b662d2d884 200 Gene3D G3DSA:3.90.20.20 29 139 2.1E-22 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 XF_2341 412123debde33661a7a536b662d2d884 200 SUPERFAMILY SSF58014 48 142 3.01E-21 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 XF_0972 690c80adf49c57ef7f417eb9d9c8481e 210 Gene3D G3DSA:3.40.50.12740 5 206 1.1E-48 T 14-10-2018 XF_0972 690c80adf49c57ef7f417eb9d9c8481e 210 SMART SM00448 4 118 2.4E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_0972 690c80adf49c57ef7f417eb9d9c8481e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XF_0972 690c80adf49c57ef7f417eb9d9c8481e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XF_0972 690c80adf49c57ef7f417eb9d9c8481e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XF_0972 690c80adf49c57ef7f417eb9d9c8481e 210 SUPERFAMILY SSF52172 1 130 5.41E-26 T 14-10-2018 IPR011006 CheY-like superfamily XF_0972 690c80adf49c57ef7f417eb9d9c8481e 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XF_0972 690c80adf49c57ef7f417eb9d9c8481e 210 SUPERFAMILY SSF46894 129 204 4.76E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XF_0972 690c80adf49c57ef7f417eb9d9c8481e 210 Pfam PF00072 Response regulator receiver domain 6 118 4.6E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_0972 690c80adf49c57ef7f417eb9d9c8481e 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 2.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XF_0972 690c80adf49c57ef7f417eb9d9c8481e 210 SMART SM00421 146 203 3.7E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XF_0171 f2fd689b2f22953174e2eaa3edc90c71 282 Pfam PF01578 Cytochrome C assembly protein 36 260 1.4E-37 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 XF_0072 f2fd689b2f22953174e2eaa3edc90c71 282 Pfam PF01578 Cytochrome C assembly protein 36 260 1.4E-37 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 XF_0419 78877996f52179972495742ec4f85de5 178 Pfam PF02470 MlaD protein 39 117 6.8E-21 T 14-10-2018 IPR003399 Mce/MlaD XF_0419 78877996f52179972495742ec4f85de5 178 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 5 148 5.0E-50 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 XF_1911 47be116913b5d837f2df4bcbd8feada3 157 SUPERFAMILY SSF117070 11 129 3.66E-7 T 14-10-2018 XF_1483 2fb0418b9c6a94cece74bb6ea89ed876 294 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 291 1.0E-103 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 XF_1483 2fb0418b9c6a94cece74bb6ea89ed876 294 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 289 59.229 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD XF_1483 2fb0418b9c6a94cece74bb6ea89ed876 294 Gene3D G3DSA:1.10.150.130 2 96 3.7E-20 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal XF_1483 2fb0418b9c6a94cece74bb6ea89ed876 294 SUPERFAMILY SSF56349 5 281 6.47E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XF_1483 2fb0418b9c6a94cece74bb6ea89ed876 294 Pfam PF00589 Phage integrase family 110 275 1.0E-46 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XF_1483 2fb0418b9c6a94cece74bb6ea89ed876 294 Gene3D G3DSA:1.10.443.10 110 283 7.3E-57 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XF_1483 2fb0418b9c6a94cece74bb6ea89ed876 294 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 88 1.9E-19 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XF_1361 bbd1bb4e4d1ffb4c172ebc879489ab16 279 SUPERFAMILY SSF56281 4 269 1.57E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XF_1361 bbd1bb4e4d1ffb4c172ebc879489ab16 279 Pfam PF00753 Metallo-beta-lactamase superfamily 43 264 1.9E-42 T 14-10-2018 IPR001279 Metallo-beta-lactamase XF_1361 bbd1bb4e4d1ffb4c172ebc879489ab16 279 Gene3D G3DSA:3.60.15.10 3 276 5.7E-51 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XF_1361 bbd1bb4e4d1ffb4c172ebc879489ab16 279 SMART SM00849 45 264 7.3E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase XF_2524 ec3df8447ec8c39c7e6f21bd020ec443 530 Pfam PF02498 BRO family, N-terminal domain 42 129 4.5E-15 T 14-10-2018 IPR003497 BRO N-terminal domain XF_2524 ec3df8447ec8c39c7e6f21bd020ec443 530 Pfam PF02498 BRO family, N-terminal domain 174 260 2.1E-23 T 14-10-2018 IPR003497 BRO N-terminal domain XF_2524 ec3df8447ec8c39c7e6f21bd020ec443 530 Pfam PF02498 BRO family, N-terminal domain 291 378 5.1E-24 T 14-10-2018 IPR003497 BRO N-terminal domain XF_2524 ec3df8447ec8c39c7e6f21bd020ec443 530 SMART SM01040 41 129 6.3E-27 T 14-10-2018 IPR003497 BRO N-terminal domain XF_2524 ec3df8447ec8c39c7e6f21bd020ec443 530 SMART SM01040 290 378 5.6E-38 T 14-10-2018 IPR003497 BRO N-terminal domain XF_2524 ec3df8447ec8c39c7e6f21bd020ec443 530 SMART SM01040 173 260 6.0E-38 T 14-10-2018 IPR003497 BRO N-terminal domain XF_2132 4f974103b0b5eb4a7ebbdd0b792b2bf9 226 Gene3D G3DSA:1.10.443.10 56 222 2.1E-29 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XF_2132 4f974103b0b5eb4a7ebbdd0b792b2bf9 226 Pfam PF00589 Phage integrase family 63 216 2.4E-17 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XF_2132 4f974103b0b5eb4a7ebbdd0b792b2bf9 226 SUPERFAMILY SSF56349 3 216 5.59E-40 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XF_1793 e6ab2c9855f6345bf67cd92ac7043e1e 102 Pfam PF13274 Protein of unknown function (DUF4065) 29 78 1.8E-11 T 14-10-2018 IPR025272 Domain of unknown function DUF4065 XF_2560 5dde0ee8def9ea9424ff6b1de4bd9566 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 9.2E-36 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2560 5dde0ee8def9ea9424ff6b1de4bd9566 76 SUPERFAMILY SSF46911 3 74 1.05E-28 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2560 5dde0ee8def9ea9424ff6b1de4bd9566 76 Gene3D G3DSA:4.10.640.10 20 75 1.3E-26 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2560 5dde0ee8def9ea9424ff6b1de4bd9566 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 5.0E-23 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2560 5dde0ee8def9ea9424ff6b1de4bd9566 76 Pfam PF01084 Ribosomal protein S18 18 68 1.5E-24 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2560 5dde0ee8def9ea9424ff6b1de4bd9566 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.951 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2560 5dde0ee8def9ea9424ff6b1de4bd9566 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-17 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2560 5dde0ee8def9ea9424ff6b1de4bd9566 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-17 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2560 5dde0ee8def9ea9424ff6b1de4bd9566 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-17 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2560 5dde0ee8def9ea9424ff6b1de4bd9566 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-17 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2560 5dde0ee8def9ea9424ff6b1de4bd9566 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0912 cd619b1e65d0a197972e015283707a8f 146 Pfam PF04386 Stringent starvation protein B 12 146 1.6E-32 T 14-10-2018 IPR007481 Stringent starvation protein B XF_0912 cd619b1e65d0a197972e015283707a8f 146 PIRSF PIRSF005276 6 146 5.2E-54 T 14-10-2018 IPR007481 Stringent starvation protein B XF_0912 cd619b1e65d0a197972e015283707a8f 146 SUPERFAMILY SSF101738 7 122 4.84E-46 T 14-10-2018 IPR036760 SspB-like superfamily XF_0912 cd619b1e65d0a197972e015283707a8f 146 Gene3D G3DSA:2.30.30.220 6 131 7.5E-44 T 14-10-2018 IPR036760 SspB-like superfamily XF_0728 c31fe47cd48982865fd724a64510e524 169 Pfam PF04985 Phage tail tube protein FII 7 168 4.9E-54 T 14-10-2018 IPR006498 Tail tube protein XF_0728 c31fe47cd48982865fd724a64510e524 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 169 7.5E-79 T 14-10-2018 IPR006498 Tail tube protein XF_2484 c31fe47cd48982865fd724a64510e524 169 Pfam PF04985 Phage tail tube protein FII 7 168 4.9E-54 T 14-10-2018 IPR006498 Tail tube protein XF_2484 c31fe47cd48982865fd724a64510e524 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 169 7.5E-79 T 14-10-2018 IPR006498 Tail tube protein XF_1688 d13f461da5f10d7d603a092aaa149768 498 Pfam PF11863 Protein of unknown function (DUF3383) 5 496 2.0E-155 T 14-10-2018 IPR021808 Protein of unknown function DUF3383 XF_1583 d13f461da5f10d7d603a092aaa149768 498 Pfam PF11863 Protein of unknown function (DUF3383) 5 496 2.0E-155 T 14-10-2018 IPR021808 Protein of unknown function DUF3383 XF_2261 e36fc63936c3c165f8c0b00e7a25c532 653 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 10 612 2.0E-181 T 14-10-2018 IPR004814 Oligopeptide transporter OPT XF_2261 e36fc63936c3c165f8c0b00e7a25c532 653 Pfam PF03169 OPT oligopeptide transporter protein 9 611 2.4E-123 T 14-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 XF_2261 e36fc63936c3c165f8c0b00e7a25c532 653 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 2 608 5.6E-90 T 14-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 XF_1738 fd2bb41ac7e0cb3ec68034be172d4912 441 Gene3D G3DSA:1.20.1250.20 27 422 3.9E-13 T 14-10-2018 XF_1738 fd2bb41ac7e0cb3ec68034be172d4912 441 SUPERFAMILY SSF103473 30 430 3.79E-23 T 14-10-2018 IPR036259 MFS transporter superfamily XF_1192 c93624fa1c656be974daf1b771cf7395 341 Pfam PF04332 Protein of unknown function (DUF475) 49 339 1.8E-133 T 14-10-2018 IPR007427 Protein of unknown function DUF475 XF_0749 b978021c59b30502722a1a20f94dc9b6 134 SUPERFAMILY SSF81273 82 113 5.89E-6 T 14-10-2018 XF_0749 b978021c59b30502722a1a20f94dc9b6 134 Gene3D G3DSA:3.30.160.510 62 125 2.1E-31 T 14-10-2018 XF_0749 b978021c59b30502722a1a20f94dc9b6 134 Pfam PF00816 H-NS histone family 18 112 4.5E-17 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 XF_0749 b978021c59b30502722a1a20f94dc9b6 134 SMART SM00528 79 122 1.5E-4 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 XF_1199 cba1fca540f64f165905fb9f0f3e94c5 108 SUPERFAMILY SSF52833 3 107 1.32E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_1199 cba1fca540f64f165905fb9f0f3e94c5 108 Pfam PF00085 Thioredoxin 6 105 3.2E-12 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 XF_1199 cba1fca540f64f165905fb9f0f3e94c5 108 Gene3D G3DSA:3.40.30.10 1 108 4.7E-16 T 14-10-2018 XF_0166 2b8224bf9bedad84fea5c02fdaecef18 381 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 14 381 42.703 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 XF_0166 2b8224bf9bedad84fea5c02fdaecef18 381 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 15 381 5.4E-171 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 XF_0166 2b8224bf9bedad84fea5c02fdaecef18 381 Gene3D G3DSA:3.30.420.40 159 341 4.4E-129 T 14-10-2018 XF_0166 2b8224bf9bedad84fea5c02fdaecef18 381 SUPERFAMILY SSF53067 15 355 8.51E-27 T 14-10-2018 XF_0166 2b8224bf9bedad84fea5c02fdaecef18 381 Gene3D G3DSA:3.30.420.40 21 376 4.4E-129 T 14-10-2018 XF_2299 7943b9f14042f390f2d10ca3f575e60f 257 Pfam PF02348 Cytidylyltransferase 10 228 1.9E-44 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 XF_2299 7943b9f14042f390f2d10ca3f575e60f 257 SUPERFAMILY SSF53448 8 253 1.67E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_2299 7943b9f14042f390f2d10ca3f575e60f 257 Gene3D G3DSA:3.90.550.10 6 255 2.2E-81 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_2299 7943b9f14042f390f2d10ca3f575e60f 257 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 8 247 1.7E-75 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 XF_2299 7943b9f14042f390f2d10ca3f575e60f 257 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 6 255 37.864 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 XF_2409 2e6802bcf5311d4e4f3ad8cf8e540c6c 347 Pfam PF13087 AAA domain 14 139 8.7E-20 T 14-10-2018 XF_2409 2e6802bcf5311d4e4f3ad8cf8e540c6c 347 SUPERFAMILY SSF56024 169 335 1.16E-19 T 14-10-2018 XF_2409 2e6802bcf5311d4e4f3ad8cf8e540c6c 347 Gene3D G3DSA:3.30.870.10 163 336 4.9E-21 T 14-10-2018 XF_2409 2e6802bcf5311d4e4f3ad8cf8e540c6c 347 Pfam PF13091 PLD-like domain 196 331 4.8E-13 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XF_2409 2e6802bcf5311d4e4f3ad8cf8e540c6c 347 SUPERFAMILY SSF52540 26 136 3.19E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2409 2e6802bcf5311d4e4f3ad8cf8e540c6c 347 Gene3D G3DSA:3.40.50.300 2 161 3.1E-27 T 14-10-2018 XF_1643 96c2f8cf6b1e44ac19cf23860f0e1e77 85 Pfam PF13986 Domain of unknown function (DUF4224) 19 63 8.9E-18 T 14-10-2018 IPR025319 Domain of unknown function DUF4224 XF_1749 310c7507b0feacf5799806a60d643a23 409 Gene3D G3DSA:1.20.1250.20 22 406 5.5E-45 T 14-10-2018 XF_1749 310c7507b0feacf5799806a60d643a23 409 Pfam PF07690 Major Facilitator Superfamily 33 348 1.3E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XF_1749 310c7507b0feacf5799806a60d643a23 409 SUPERFAMILY SSF103473 11 404 3.92E-59 T 14-10-2018 IPR036259 MFS transporter superfamily XF_2472 1745c67132e4d2207ced0e1b3993c6c7 435 SUPERFAMILY SSF51338 2 430 1.77E-20 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XF_2472 1745c67132e4d2207ced0e1b3993c6c7 435 Pfam PF01979 Amidohydrolase family 56 403 2.1E-63 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 XF_2472 1745c67132e4d2207ced0e1b3993c6c7 435 SUPERFAMILY SSF51556 58 357 8.08E-94 T 14-10-2018 IPR032466 Metal-dependent hydrolase XF_2472 1745c67132e4d2207ced0e1b3993c6c7 435 Gene3D G3DSA:3.20.20.140 59 349 9.7E-161 T 14-10-2018 XF_2472 1745c67132e4d2207ced0e1b3993c6c7 435 Gene3D G3DSA:2.30.40.10 2 423 9.7E-161 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XF_1191 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 SUPERFAMILY SSF109998 70 311 8.63E-15 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily XF_1191 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 Pfam PF13616 PPIC-type PPIASE domain 279 387 5.0E-28 T 14-10-2018 XF_1191 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 Pfam PF13623 SurA N-terminal domain 2 157 1.1E-19 T 14-10-2018 XF_1191 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 325 346 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 XF_1191 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 Gene3D G3DSA:3.10.50.40 278 410 9.4E-35 T 14-10-2018 XF_1191 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 SUPERFAMILY SSF54534 284 388 1.11E-29 T 14-10-2018 XF_0060 8dea310cc01a0fac3fd54d145eae9f7f 260 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 250 3.4E-62 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XF_0060 8dea310cc01a0fac3fd54d145eae9f7f 260 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 256 77.857 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XF_0060 8dea310cc01a0fac3fd54d145eae9f7f 260 SUPERFAMILY SSF63892 4 251 1.31E-76 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XF_0060 8dea310cc01a0fac3fd54d145eae9f7f 260 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 249 4.7E-79 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XF_0060 8dea310cc01a0fac3fd54d145eae9f7f 260 Gene3D G3DSA:3.20.20.70 1 258 1.2E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_0175 54c312042d1349efe8950513a71a08e5 214 Pfam PF03006 Haemolysin-III related 13 206 3.4E-37 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 XF_0175 54c312042d1349efe8950513a71a08e5 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 211 3.2E-61 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 XF_1397 fc1722785a036ab179d66e65829b74a4 303 Gene3D G3DSA:3.40.50.150 54 300 2.4E-31 T 14-10-2018 XF_1397 fc1722785a036ab179d66e65829b74a4 303 SUPERFAMILY SSF53335 61 296 2.59E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_1397 fc1722785a036ab179d66e65829b74a4 303 Pfam PF13649 Methyltransferase domain 82 176 4.0E-15 T 14-10-2018 XF_2169 d01152fef49c227a7354eb7424911141 698 SUPERFAMILY SSF48452 25 315 1.27E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2169 d01152fef49c227a7354eb7424911141 698 Pfam PF13432 Tetratricopeptide repeat 216 279 3.3E-6 T 14-10-2018 XF_2169 d01152fef49c227a7354eb7424911141 698 Pfam PF13432 Tetratricopeptide repeat 149 207 7.7E-7 T 14-10-2018 XF_2169 d01152fef49c227a7354eb7424911141 698 SUPERFAMILY SSF48452 334 442 6.45E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2169 d01152fef49c227a7354eb7424911141 698 SMART SM00028 108 141 340.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2169 d01152fef49c227a7354eb7424911141 698 SMART SM00028 74 107 64.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2169 d01152fef49c227a7354eb7424911141 698 SMART SM00028 210 243 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2169 d01152fef49c227a7354eb7424911141 698 SMART SM00028 279 312 270.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2169 d01152fef49c227a7354eb7424911141 698 SMART SM00028 245 278 100.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2169 d01152fef49c227a7354eb7424911141 698 SMART SM00028 176 209 0.002 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2169 d01152fef49c227a7354eb7424911141 698 SMART SM00028 142 175 17.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2169 d01152fef49c227a7354eb7424911141 698 SMART SM00028 40 73 89.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2169 d01152fef49c227a7354eb7424911141 698 Gene3D G3DSA:1.25.40.10 327 460 9.4E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2169 d01152fef49c227a7354eb7424911141 698 Gene3D G3DSA:1.25.40.10 12 323 2.2E-48 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2169 d01152fef49c227a7354eb7424911141 698 SUPERFAMILY SSF52540 558 680 8.18E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0149 03f63c261a56e5d77887bee0586a34f8 409 SUPERFAMILY SSF52507 10 184 2.88E-55 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 XF_0149 03f63c261a56e5d77887bee0586a34f8 409 Gene3D G3DSA:3.40.50.1950 7 190 3.3E-54 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 XF_0149 03f63c261a56e5d77887bee0586a34f8 409 Gene3D G3DSA:3.40.50.10300 196 409 3.1E-73 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 XF_0149 03f63c261a56e5d77887bee0586a34f8 409 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 10 403 4.7E-133 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 XF_0149 03f63c261a56e5d77887bee0586a34f8 409 Pfam PF02441 Flavoprotein 14 185 1.5E-42 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 XF_0149 03f63c261a56e5d77887bee0586a34f8 409 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 198 378 9.0E-68 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 XF_0149 03f63c261a56e5d77887bee0586a34f8 409 SUPERFAMILY SSF102645 196 408 2.09E-71 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 XF_1937 34e97f9b29f015cb31f7880a9e1c64f9 447 Pfam PF00375 Sodium:dicarboxylate symporter family 30 437 7.4E-111 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 XF_1937 34e97f9b29f015cb31f7880a9e1c64f9 447 Gene3D G3DSA:1.10.3860.10 21 443 3.8E-120 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XF_1937 34e97f9b29f015cb31f7880a9e1c64f9 447 SUPERFAMILY SSF118215 30 438 1.83E-100 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XF_1937 34e97f9b29f015cb31f7880a9e1c64f9 447 PRINTS PR00173 Glutamate-aspartate symporter signature 106 131 9.9E-35 T 14-10-2018 XF_1937 34e97f9b29f015cb31f7880a9e1c64f9 447 PRINTS PR00173 Glutamate-aspartate symporter signature 266 285 9.9E-35 T 14-10-2018 XF_1937 34e97f9b29f015cb31f7880a9e1c64f9 447 PRINTS PR00173 Glutamate-aspartate symporter signature 393 413 9.9E-35 T 14-10-2018 XF_1937 34e97f9b29f015cb31f7880a9e1c64f9 447 PRINTS PR00173 Glutamate-aspartate symporter signature 366 385 9.9E-35 T 14-10-2018 XF_1937 34e97f9b29f015cb31f7880a9e1c64f9 447 PRINTS PR00173 Glutamate-aspartate symporter signature 76 96 9.9E-35 T 14-10-2018 XF_1937 34e97f9b29f015cb31f7880a9e1c64f9 447 PRINTS PR00173 Glutamate-aspartate symporter signature 331 357 9.9E-35 T 14-10-2018 XF_1937 34e97f9b29f015cb31f7880a9e1c64f9 447 PRINTS PR00173 Glutamate-aspartate symporter signature 183 205 9.9E-35 T 14-10-2018 XF_1916 f724e016e8d203d086ef928cb77fab0f 478 Gene3D G3DSA:3.40.50.12780 20 347 2.3E-61 T 14-10-2018 XF_1916 f724e016e8d203d086ef928cb77fab0f 478 SUPERFAMILY SSF56801 54 394 6.28E-24 T 14-10-2018 XF_1916 f724e016e8d203d086ef928cb77fab0f 478 Pfam PF00501 AMP-binding enzyme 88 307 1.3E-7 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XF_0309 458ee582098d6b3926b91b1e0fb4cab3 175 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 174 9.1E-62 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0309 458ee582098d6b3926b91b1e0fb4cab3 175 PIRSF PIRSF000216 8 175 5.7E-51 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0309 458ee582098d6b3926b91b1e0fb4cab3 175 SUPERFAMILY SSF52833 20 174 5.37E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_0309 458ee582098d6b3926b91b1e0fb4cab3 175 Gene3D G3DSA:1.10.10.1590 18 90 5.5E-21 T 14-10-2018 XF_0309 458ee582098d6b3926b91b1e0fb4cab3 175 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 27 174 2.3E-46 T 14-10-2018 XF_0309 458ee582098d6b3926b91b1e0fb4cab3 175 Gene3D G3DSA:3.40.30.10 92 175 1.9E-22 T 14-10-2018 XF_2289 c152c37a0d3eca97650f0903edd75d0d 98 Pfam PF13986 Domain of unknown function (DUF4224) 25 68 5.1E-20 T 14-10-2018 IPR025319 Domain of unknown function DUF4224 XF_2423 105bda6d29d6bf98c9a77188677b4251 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2423 105bda6d29d6bf98c9a77188677b4251 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.3E-36 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2423 105bda6d29d6bf98c9a77188677b4251 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.3E-36 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2423 105bda6d29d6bf98c9a77188677b4251 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.3E-36 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2423 105bda6d29d6bf98c9a77188677b4251 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.541 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2423 105bda6d29d6bf98c9a77188677b4251 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2423 105bda6d29d6bf98c9a77188677b4251 85 Gene3D G3DSA:2.40.50.100 21 85 1.0E-28 T 14-10-2018 XF_2423 105bda6d29d6bf98c9a77188677b4251 85 SUPERFAMILY SSF110324 2 81 2.48E-32 T 14-10-2018 XF_2423 105bda6d29d6bf98c9a77188677b4251 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.4E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2423 105bda6d29d6bf98c9a77188677b4251 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.1E-36 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2442 b26fe84d2ffb3274c386bd3b79575e0a 363 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 24 357 2.2E-107 T 14-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 XF_2442 b26fe84d2ffb3274c386bd3b79575e0a 363 Gene3D G3DSA:3.75.10.10 22 363 3.6E-113 T 14-10-2018 XF_2442 b26fe84d2ffb3274c386bd3b79575e0a 363 SUPERFAMILY SSF55909 16 358 5.18E-113 T 14-10-2018 XF_0887 86c04328aec071f23b5301bdd747eedb 860 Gene3D G3DSA:3.40.50.2000 12 395 9.1E-55 T 14-10-2018 XF_0887 86c04328aec071f23b5301bdd747eedb 860 Gene3D G3DSA:3.40.50.2000 655 823 2.8E-22 T 14-10-2018 XF_0887 86c04328aec071f23b5301bdd747eedb 860 Gene3D G3DSA:3.40.50.2000 200 383 9.1E-55 T 14-10-2018 XF_0887 86c04328aec071f23b5301bdd747eedb 860 Pfam PF00534 Glycosyl transferases group 1 676 819 3.1E-17 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 XF_0887 86c04328aec071f23b5301bdd747eedb 860 Pfam PF00534 Glycosyl transferases group 1 224 379 2.9E-28 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 XF_0887 86c04328aec071f23b5301bdd747eedb 860 SUPERFAMILY SSF53756 16 401 2.51E-64 T 14-10-2018 XF_0887 86c04328aec071f23b5301bdd747eedb 860 SUPERFAMILY SSF53756 538 842 1.15E-34 T 14-10-2018 XF_0887 86c04328aec071f23b5301bdd747eedb 860 Pfam PF13439 Glycosyltransferase Family 4 18 202 1.2E-10 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XF_2435 db217c976a1eec9203d2093f068f084b 398 SMART SM00028 118 151 86.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2435 db217c976a1eec9203d2093f068f084b 398 SMART SM00028 46 79 37.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2435 db217c976a1eec9203d2093f068f084b 398 SMART SM00028 191 224 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2435 db217c976a1eec9203d2093f068f084b 398 SMART SM00028 225 258 76.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XF_2435 db217c976a1eec9203d2093f068f084b 398 SUPERFAMILY SSF81901 50 258 2.51E-17 T 14-10-2018 XF_2435 db217c976a1eec9203d2093f068f084b 398 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 15 396 34.646 T 14-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 XF_2435 db217c976a1eec9203d2093f068f084b 398 Gene3D G3DSA:1.25.40.10 44 184 4.6E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2435 db217c976a1eec9203d2093f068f084b 398 Gene3D G3DSA:1.25.40.10 185 325 5.7E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_2435 db217c976a1eec9203d2093f068f084b 398 Pfam PF13432 Tetratricopeptide repeat 196 256 0.012 T 14-10-2018 XF_2435 db217c976a1eec9203d2093f068f084b 398 Pfam PF13432 Tetratricopeptide repeat 122 177 0.0041 T 14-10-2018 XF_1726 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1726 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1726 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1726 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.9E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1726 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.9E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1726 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.9E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1726 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.9E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1726 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.9E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1726 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.9E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1726 c222cc81ba6428fc8ab32d818fcf33b6 255 SUPERFAMILY SSF51735 5 254 7.9E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1726 c222cc81ba6428fc8ab32d818fcf33b6 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 2.6E-71 T 14-10-2018 XF_1726 c222cc81ba6428fc8ab32d818fcf33b6 255 Gene3D G3DSA:3.40.50.720 1 254 7.8E-85 T 14-10-2018 XF_1304 b005f8b78cf8f23e163e113ddd1586f2 420 Pfam PF12821 Threonine/Serine exporter, ThrE 290 411 4.2E-15 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE XF_1304 b005f8b78cf8f23e163e113ddd1586f2 420 Pfam PF06738 Putative threonine/serine exporter 21 263 1.3E-53 T 14-10-2018 IPR010619 Putative threonine/serine exporter XF_0222 c5b57c64a7f658104dda74a4dc733b93 584 Pfam PF05960 Bacterial protein of unknown function (DUF885) 50 564 3.1E-144 T 14-10-2018 IPR010281 Protein of unknown function DUF885 XF_0442 5841f0ee815190c7dde4a9a127f4a077 256 Gene3D G3DSA:1.20.120.1760 9 198 3.7E-13 T 14-10-2018 XF_0442 5841f0ee815190c7dde4a9a127f4a077 256 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XF_0442 5841f0ee815190c7dde4a9a127f4a077 256 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 24 192 1.6E-31 T 14-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 XF_0442 5841f0ee815190c7dde4a9a127f4a077 256 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 79 5.2E-14 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XF_2462 514df20b35fad58de330c34c8a4befb8 144 Pfam PF03918 Cytochrome C biogenesis protein 24 134 1.2E-41 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family XF_2462 514df20b35fad58de330c34c8a4befb8 144 Gene3D G3DSA:1.10.8.640 26 108 1.7E-29 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily XF_0224 52d26cdde88c7375f830d288adb355ee 120 SMART SM01323 29 111 2.8E-39 T 14-10-2018 IPR003849 Preprotein translocase YajC XF_0224 52d26cdde88c7375f830d288adb355ee 120 PRINTS PR01853 Bacterial YajC preprotein translocase signature 69 87 3.9E-12 T 14-10-2018 IPR003849 Preprotein translocase YajC XF_0224 52d26cdde88c7375f830d288adb355ee 120 PRINTS PR01853 Bacterial YajC preprotein translocase signature 31 51 3.9E-12 T 14-10-2018 IPR003849 Preprotein translocase YajC XF_0224 52d26cdde88c7375f830d288adb355ee 120 Pfam PF02699 Preprotein translocase subunit 33 109 2.6E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC XF_0224 52d26cdde88c7375f830d288adb355ee 120 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 31 111 3.0E-24 T 14-10-2018 IPR003849 Preprotein translocase YajC XF_0597 5e8bd3c811b2f159fca8e0685df9e64f 218 Pfam PF16357 Putative PepSY_TM-like 24 218 8.8E-82 T 14-10-2018 IPR032307 Putative PepSY TM-like protein XF_1760 842bbebb15be42154b9a886b02e945d5 220 Pfam PF11679 Protein of unknown function (DUF3275) 14 213 1.0E-90 T 14-10-2018 IPR021693 Protein of unknown function DUF3275 XF_2251 8bb268c3cc96fb133733ba7e12ceb2d0 577 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 181 206 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site XF_2251 8bb268c3cc96fb133733ba7e12ceb2d0 577 Pfam PF00474 Sodium:solute symporter family 66 491 6.4E-102 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 XF_2251 8bb268c3cc96fb133733ba7e12ceb2d0 577 Gene3D G3DSA:1.20.1730.10 54 571 1.2E-56 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily XF_2251 8bb268c3cc96fb133733ba7e12ceb2d0 577 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 66 491 1.6E-57 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 XF_1744 3b63900a2dc3b635a62119e77e53589b 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XF_1744 3b63900a2dc3b635a62119e77e53589b 247 SUPERFAMILY SSF51735 3 232 1.0E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1744 3b63900a2dc3b635a62119e77e53589b 247 Gene3D G3DSA:3.40.50.720 1 242 5.0E-67 T 14-10-2018 XF_1744 3b63900a2dc3b635a62119e77e53589b 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 181 0.0028 T 14-10-2018 XF_1744 3b63900a2dc3b635a62119e77e53589b 247 Pfam PF00106 short chain dehydrogenase 5 199 9.1E-55 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1744 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.9E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1744 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.9E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1744 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.9E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1744 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.9E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1744 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.9E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2734 30e3d998ff300075367ff5ca125aa847 1144 Pfam PF13558 Putative exonuclease SbcCD, C subunit 993 1083 5.8E-22 T 14-10-2018 XF_2734 30e3d998ff300075367ff5ca125aa847 1144 Gene3D G3DSA:3.40.1140.10 18 206 2.5E-6 T 14-10-2018 XF_2734 30e3d998ff300075367ff5ca125aa847 1144 Pfam PF13555 P-loop containing region of AAA domain 22 82 2.2E-23 T 14-10-2018 XF_2734 30e3d998ff300075367ff5ca125aa847 1144 SUPERFAMILY SSF52540 21 1093 4.04E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0312 a65b01fe1dc42cd185d682d75474192a 330 Pfam PF00146 NADH dehydrogenase 2 318 1.1E-116 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0312 a65b01fe1dc42cd185d682d75474192a 330 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 196 209 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0312 a65b01fe1dc42cd185d682d75474192a 330 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 1 324 23.366 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_2079 300d7f954c61e74f1c83d545812e8953 129 SUPERFAMILY SSF101082 3 103 7.72E-17 T 14-10-2018 XF_1476 4b13aac5ca9a36faf4cb0d015d0a2c43 485 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 20 476 3.4E-193 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 XF_1476 4b13aac5ca9a36faf4cb0d015d0a2c43 485 Pfam PF01458 Uncharacterized protein family (UPF0051) 223 456 5.2E-68 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 XF_1476 4b13aac5ca9a36faf4cb0d015d0a2c43 485 SUPERFAMILY SSF101960 41 482 8.24E-137 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily XF_2008 b4bcf2786a980bc75ef77a8838f19f19 217 Pfam PF00293 NUDIX domain 70 132 2.4E-9 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XF_2008 b4bcf2786a980bc75ef77a8838f19f19 217 Gene3D G3DSA:3.90.79.10 43 214 7.6E-33 T 14-10-2018 XF_2008 b4bcf2786a980bc75ef77a8838f19f19 217 ProSitePatterns PS00893 Nudix box signature. 106 127 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XF_2008 b4bcf2786a980bc75ef77a8838f19f19 217 SUPERFAMILY SSF55811 48 206 4.33E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XF_2218 43906af58d578280269c8f69d64f46cf 365 Gene3D G3DSA:3.90.1150.10 11 353 2.6E-117 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XF_2218 43906af58d578280269c8f69d64f46cf 365 SUPERFAMILY SSF53383 27 360 5.83E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XF_2218 43906af58d578280269c8f69d64f46cf 365 Gene3D G3DSA:3.40.640.10 55 264 2.6E-117 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XF_2218 43906af58d578280269c8f69d64f46cf 365 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 361 54.011 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 XF_2218 43906af58d578280269c8f69d64f46cf 365 Pfam PF00155 Aminotransferase class I and II 49 356 1.3E-50 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XF_2218 43906af58d578280269c8f69d64f46cf 365 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 13 360 2.6E-113 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 XF_1507 886b93ea3dc55d920fc9e272ef0561b6 383 SMART SM00729 6 223 1.3E-50 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XF_1507 886b93ea3dc55d920fc9e272ef0561b6 383 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 353 1.3E-107 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 XF_1507 886b93ea3dc55d920fc9e272ef0561b6 383 Pfam PF04055 Radical SAM superfamily 11 177 4.6E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XF_1507 886b93ea3dc55d920fc9e272ef0561b6 383 Gene3D G3DSA:3.80.30.20 3 295 3.8E-98 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe XF_1507 886b93ea3dc55d920fc9e272ef0561b6 383 SUPERFAMILY SSF102114 4 381 4.58E-104 T 14-10-2018 XF_1507 886b93ea3dc55d920fc9e272ef0561b6 383 Pfam PF06969 HemN C-terminal domain 314 370 1.2E-6 T 14-10-2018 IPR010723 HemN, C-terminal XF_1742 89f8dd8d071d95b2b58aba68a0b6af72 356 SUPERFAMILY SSF63829 56 352 2.18E-58 T 14-10-2018 XF_1742 89f8dd8d071d95b2b58aba68a0b6af72 356 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 83 305 6.7E-33 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region XF_1742 89f8dd8d071d95b2b58aba68a0b6af72 356 Gene3D G3DSA:2.120.10.30 35 356 7.2E-107 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XF_2692 517898b4fee99afb229d6dd0771e5733 256 SMART SM00987 67 227 7.8E-36 T 14-10-2018 XF_2692 517898b4fee99afb229d6dd0771e5733 256 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 75 84 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XF_2692 517898b4fee99afb229d6dd0771e5733 256 Pfam PF03167 Uracil DNA glycosylase superfamily 72 226 3.6E-21 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XF_2692 517898b4fee99afb229d6dd0771e5733 256 SUPERFAMILY SSF52141 20 239 3.27E-88 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XF_2692 517898b4fee99afb229d6dd0771e5733 256 Gene3D G3DSA:3.40.470.10 3 245 4.2E-92 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XF_2692 517898b4fee99afb229d6dd0771e5733 256 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 23 231 3.7E-78 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XF_2692 517898b4fee99afb229d6dd0771e5733 256 SMART SM00986 67 227 7.8E-36 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XF_2692 517898b4fee99afb229d6dd0771e5733 256 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 22 238 37.871 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XF_1409 b35937560c69a6e0080da2aa59d2d654 240 SMART SM00382 26 212 1.3E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1409 b35937560c69a6e0080da2aa59d2d654 240 Gene3D G3DSA:3.40.50.300 1 240 5.8E-69 T 14-10-2018 XF_1409 b35937560c69a6e0080da2aa59d2d654 240 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 235 1.4E-6 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal XF_1409 b35937560c69a6e0080da2aa59d2d654 240 SUPERFAMILY SSF52540 2 236 3.03E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1409 b35937560c69a6e0080da2aa59d2d654 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 2 240 3.5E-113 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 XF_1409 b35937560c69a6e0080da2aa59d2d654 240 Pfam PF00005 ABC transporter 20 165 6.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_0216 7689c6430ad776b60a9871babe15415d 168 SUPERFAMILY SSF46785 26 162 6.73E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_0216 7689c6430ad776b60a9871babe15415d 168 Gene3D G3DSA:1.10.10.10 15 162 1.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_0216 7689c6430ad776b60a9871babe15415d 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 9.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_0216 7689c6430ad776b60a9871babe15415d 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 9.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_0216 7689c6430ad776b60a9871babe15415d 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 9.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_0216 7689c6430ad776b60a9871babe15415d 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 9.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_0216 7689c6430ad776b60a9871babe15415d 168 Pfam PF01047 MarR family 52 112 2.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_0216 7689c6430ad776b60a9871babe15415d 168 SMART SM00347 45 147 1.3E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XF_1295 521469ac6370bc3f3676eb696889ea60 180 SMART SM00463 94 178 1.9E-17 T 14-10-2018 IPR002625 Smr domain XF_1295 521469ac6370bc3f3676eb696889ea60 180 SUPERFAMILY SSF160443 95 177 7.32E-17 T 14-10-2018 IPR036063 Smr domain superfamily XF_1295 521469ac6370bc3f3676eb696889ea60 180 Pfam PF01713 Smr domain 97 177 9.8E-21 T 14-10-2018 IPR002625 Smr domain XF_1295 521469ac6370bc3f3676eb696889ea60 180 Gene3D G3DSA:3.30.1370.110 49 180 1.8E-37 T 14-10-2018 XF_1169 b1d5ebce29ed42983b5bf7f965362aaf 179 ProSitePatterns PS00585 Ribosomal protein S5 signature. 39 71 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site XF_1169 b1d5ebce29ed42983b5bf7f965362aaf 179 Pfam PF00333 Ribosomal protein S5, N-terminal domain 24 85 5.0E-24 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 XF_1169 b1d5ebce29ed42983b5bf7f965362aaf 179 Pfam PF03719 Ribosomal protein S5, C-terminal domain 98 168 1.7E-28 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 XF_1169 b1d5ebce29ed42983b5bf7f965362aaf 179 Gene3D G3DSA:3.30.230.10 85 176 4.3E-35 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XF_1169 b1d5ebce29ed42983b5bf7f965362aaf 179 SUPERFAMILY SSF54211 90 170 8.34E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_1169 b1d5ebce29ed42983b5bf7f965362aaf 179 Gene3D G3DSA:3.30.160.20 13 84 1.2E-26 T 14-10-2018 XF_1169 b1d5ebce29ed42983b5bf7f965362aaf 179 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 22 172 4.4E-64 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 XF_1169 b1d5ebce29ed42983b5bf7f965362aaf 179 SUPERFAMILY SSF54768 20 87 1.46E-20 T 14-10-2018 XF_1169 b1d5ebce29ed42983b5bf7f965362aaf 179 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 174 33.347 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 XF_1670 a3e6d943918bdc2aea0fc3d3a1ddc189 109 Pfam PF16083 LydA holin phage, holin superfamily III 15 90 3.1E-18 T 14-10-2018 IPR032126 LydA-like holin XF_1565 a3e6d943918bdc2aea0fc3d3a1ddc189 109 Pfam PF16083 LydA holin phage, holin superfamily III 15 90 3.1E-18 T 14-10-2018 IPR032126 LydA-like holin XF_2598 f1d2abba5db873c84c20b902f37079e2 173 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 80 159 5.3E-33 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 XF_2598 f1d2abba5db873c84c20b902f37079e2 173 SUPERFAMILY SSF53155 5 83 2.16E-16 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 XF_2598 f1d2abba5db873c84c20b902f37079e2 173 Gene3D G3DSA:3.30.160.70 5 75 2.0E-14 T 14-10-2018 XF_2598 f1d2abba5db873c84c20b902f37079e2 173 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 9 160 44.065 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 XF_2598 f1d2abba5db873c84c20b902f37079e2 173 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 130 136 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 XF_2598 f1d2abba5db873c84c20b902f37079e2 173 Gene3D G3DSA:1.10.10.10 78 161 2.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_2598 f1d2abba5db873c84c20b902f37079e2 173 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 7 75 1.4E-4 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 XF_2598 f1d2abba5db873c84c20b902f37079e2 173 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 81 161 2.3E-30 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 XF_2598 f1d2abba5db873c84c20b902f37079e2 173 SUPERFAMILY SSF46767 79 161 4.05E-30 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 XF_2000 37211d3d6413482a1b51995305c37819 216 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 42 215 1.2E-77 T 14-10-2018 IPR017776 FeS assembly SUF system protein SufT, putative XF_2000 37211d3d6413482a1b51995305c37819 216 Pfam PF01883 Iron-sulfur cluster assembly protein 118 192 4.1E-10 T 14-10-2018 IPR002744 MIP18 family-like XF_2000 37211d3d6413482a1b51995305c37819 216 SUPERFAMILY SSF117916 114 214 1.44E-24 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XF_2000 37211d3d6413482a1b51995305c37819 216 Gene3D G3DSA:3.30.300.130 108 215 6.1E-31 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XF_0603 570c39615e03906597186b6f1486f480 456 SUPERFAMILY SSF54631 340 453 8.97E-19 T 14-10-2018 XF_0603 570c39615e03906597186b6f1486f480 456 SMART SM00116 343 390 2.0E-8 T 14-10-2018 IPR000644 CBS domain XF_0603 570c39615e03906597186b6f1486f480 456 Gene3D G3DSA:3.40.50.1100 40 153 3.4E-96 T 14-10-2018 XF_0603 570c39615e03906597186b6f1486f480 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 302 1.0E-56 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XF_0603 570c39615e03906597186b6f1486f480 456 Gene3D G3DSA:3.40.50.1100 9 308 3.4E-96 T 14-10-2018 XF_0603 570c39615e03906597186b6f1486f480 456 Pfam PF00571 CBS domain 344 388 8.9E-9 T 14-10-2018 IPR000644 CBS domain XF_0603 570c39615e03906597186b6f1486f480 456 SUPERFAMILY SSF53686 4 321 8.51E-82 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XF_0603 570c39615e03906597186b6f1486f480 456 Gene3D G3DSA:3.10.580.10 338 456 6.8E-17 T 14-10-2018 XF_0603 570c39615e03906597186b6f1486f480 456 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 XF_0917 80f158384e949a6f96a915c9aa1dc67e 124 Gene3D G3DSA:2.160.10.10 5 121 1.6E-10 T 14-10-2018 XF_0917 80f158384e949a6f96a915c9aa1dc67e 124 SUPERFAMILY SSF51161 38 103 2.63E-11 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily XF_0857 899f873a2bfc302b627b712e036c5e41 225 Gene3D G3DSA:3.40.50.150 9 223 3.1E-67 T 14-10-2018 XF_0857 899f873a2bfc302b627b712e036c5e41 225 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 18 220 5.9E-57 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 XF_0857 899f873a2bfc302b627b712e036c5e41 225 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 17 225 34.259 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 XF_0857 899f873a2bfc302b627b712e036c5e41 225 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 145 160 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 XF_0857 899f873a2bfc302b627b712e036c5e41 225 SUPERFAMILY SSF53335 19 219 9.33E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0857 899f873a2bfc302b627b712e036c5e41 225 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 23 219 3.0E-52 T 14-10-2018 XF_0110 9e5b693cdf0175e0224cbff0d90885f2 136 Gene3D G3DSA:2.30.30.790 3 121 7.0E-13 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0110 9e5b693cdf0175e0224cbff0d90885f2 136 PIRSF PIRSF002191 1 135 3.5E-49 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0110 9e5b693cdf0175e0224cbff0d90885f2 136 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 118 29.074 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0110 9e5b693cdf0175e0224cbff0d90885f2 136 SUPERFAMILY SSF50104 7 122 5.01E-44 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily XF_0110 9e5b693cdf0175e0224cbff0d90885f2 136 PRINTS PR00061 Ribosomal protein L19 signature 92 117 1.1E-36 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0110 9e5b693cdf0175e0224cbff0d90885f2 136 PRINTS PR00061 Ribosomal protein L19 signature 38 67 1.1E-36 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0110 9e5b693cdf0175e0224cbff0d90885f2 136 PRINTS PR00061 Ribosomal protein L19 signature 8 37 1.1E-36 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0110 9e5b693cdf0175e0224cbff0d90885f2 136 Pfam PF01245 Ribosomal protein L19 8 116 1.6E-47 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0110 9e5b693cdf0175e0224cbff0d90885f2 136 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 7 117 2.0E-46 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0110 9e5b693cdf0175e0224cbff0d90885f2 136 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2362 44f55a81b5eb2e49e0e33811796444c5 510 Pfam PF13440 Polysaccharide biosynthesis protein 44 335 1.3E-78 T 14-10-2018 XF_0066 c8fd23960b0f132cc67994f366e39c2f 395 Gene3D G3DSA:3.40.1090.10 78 191 2.1E-22 T 14-10-2018 XF_0066 c8fd23960b0f132cc67994f366e39c2f 395 Gene3D G3DSA:3.40.1090.10 192 307 4.2E-17 T 14-10-2018 XF_0066 c8fd23960b0f132cc67994f366e39c2f 395 Pfam PF01734 Patatin-like phospholipase 99 255 7.7E-28 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 XF_0066 c8fd23960b0f132cc67994f366e39c2f 395 SUPERFAMILY SSF52151 89 345 1.18E-59 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XF_2360 6c01b7dac4d49506f69564c0ba6e8158 265 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 81 247 1.2E-31 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 XF_2360 6c01b7dac4d49506f69564c0ba6e8158 265 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 83 246 8.2E-51 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 XF_2095 a1083b84d9e7b89cd34c6f5777a1169d 211 Gene3D G3DSA:2.160.10.10 17 207 3.5E-47 T 14-10-2018 XF_2095 a1083b84d9e7b89cd34c6f5777a1169d 211 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 112 140 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XF_2095 a1083b84d9e7b89cd34c6f5777a1169d 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 38 69 1.0E-4 T 14-10-2018 IPR001451 Hexapeptide repeat XF_2095 a1083b84d9e7b89cd34c6f5777a1169d 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 104 136 3.1E-6 T 14-10-2018 IPR001451 Hexapeptide repeat XF_2095 a1083b84d9e7b89cd34c6f5777a1169d 211 SUPERFAMILY SSF51161 26 164 1.01E-29 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily XF_2222 f88fc2bb159a50f015ca549b468ee84a 466 Gene3D G3DSA:3.40.50.800 365 460 2.8E-22 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily XF_2222 f88fc2bb159a50f015ca549b468ee84a 466 Gene3D G3DSA:3.30.930.10 1 362 6.3E-100 T 14-10-2018 XF_2222 f88fc2bb159a50f015ca549b468ee84a 466 Pfam PF13393 Histidyl-tRNA synthetase 9 350 2.2E-29 T 14-10-2018 XF_2222 f88fc2bb159a50f015ca549b468ee84a 466 PIRSF PIRSF001549 1 460 3.1E-132 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 XF_2222 f88fc2bb159a50f015ca549b468ee84a 466 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 448 1.1E-114 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 XF_2222 f88fc2bb159a50f015ca549b468ee84a 466 Pfam PF03129 Anticodon binding domain 369 457 2.3E-12 T 14-10-2018 IPR004154 Anticodon-binding XF_2222 f88fc2bb159a50f015ca549b468ee84a 466 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 458 27.934 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 XF_2222 f88fc2bb159a50f015ca549b468ee84a 466 SUPERFAMILY SSF55681 4 358 1.93E-68 T 14-10-2018 XF_2222 f88fc2bb159a50f015ca549b468ee84a 466 SUPERFAMILY SSF52954 366 457 1.06E-20 T 14-10-2018 XF_1784 6d9a5b3f0fadce5d6c4d15509007ac5f 253 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 28 225 8.6E-101 T 14-10-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB XF_1784 6d9a5b3f0fadce5d6c4d15509007ac5f 253 SUPERFAMILY SSF110849 37 159 1.92E-12 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily XF_1784 6d9a5b3f0fadce5d6c4d15509007ac5f 253 Pfam PF02195 ParB-like nuclease domain 39 102 9.5E-6 T 14-10-2018 IPR003115 ParB/Sulfiredoxin XF_1669 986ecf29f98c5beb5851cd94befce054 203 SUPERFAMILY SSF53955 41 187 8.7E-49 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_1669 986ecf29f98c5beb5851cd94befce054 203 Pfam PF00959 Phage lysozyme 68 175 9.6E-21 T 14-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XF_1669 986ecf29f98c5beb5851cd94befce054 203 Gene3D G3DSA:1.10.530.40 36 185 3.4E-51 T 14-10-2018 XF_1564 986ecf29f98c5beb5851cd94befce054 203 SUPERFAMILY SSF53955 41 187 8.7E-49 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_1564 986ecf29f98c5beb5851cd94befce054 203 Pfam PF00959 Phage lysozyme 68 175 9.6E-21 T 14-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XF_1564 986ecf29f98c5beb5851cd94befce054 203 Gene3D G3DSA:1.10.530.40 36 185 3.4E-51 T 14-10-2018 XF_2114 3c1444c9bcf49445855ed1d236d6ea31 170 SUPERFAMILY SSF69349 7 166 4.87E-37 T 14-10-2018 XF_2215 5edd8d920d796303f44a902557f9bdd4 265 Pfam PF00977 Histidine biosynthesis protein 5 236 1.8E-65 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 XF_2215 5edd8d920d796303f44a902557f9bdd4 265 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 241 1.8E-74 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 XF_2215 5edd8d920d796303f44a902557f9bdd4 265 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 244 31.134 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 XF_2215 5edd8d920d796303f44a902557f9bdd4 265 SUPERFAMILY SSF51366 3 243 1.88E-59 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XF_2215 5edd8d920d796303f44a902557f9bdd4 265 Gene3D G3DSA:3.20.20.70 4 249 3.4E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_2039 9b8a1469b9932879e620d4dbc6218190 285 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 13 156 3.1E-24 T 14-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 XF_2039 9b8a1469b9932879e620d4dbc6218190 285 Gene3D G3DSA:2.60.120.330 3 176 7.6E-39 T 14-10-2018 IPR027443 Isopenicillin N synthase-like XF_2039 9b8a1469b9932879e620d4dbc6218190 285 SUPERFAMILY SSF51197 4 253 2.17E-59 T 14-10-2018 XF_0993 92c0e2239f00036bb7e14f87fc101990 418 SUPERFAMILY SSF103473 22 416 3.27E-36 T 14-10-2018 IPR036259 MFS transporter superfamily XF_0993 92c0e2239f00036bb7e14f87fc101990 418 Gene3D G3DSA:1.20.1250.20 229 412 2.7E-9 T 14-10-2018 XF_0993 92c0e2239f00036bb7e14f87fc101990 418 Gene3D G3DSA:1.20.1250.20 14 212 4.2E-18 T 14-10-2018 XF_0993 92c0e2239f00036bb7e14f87fc101990 418 Pfam PF05977 Transmembrane secretion effector 18 408 3.0E-31 T 14-10-2018 IPR010290 Transmembrane secretion effector XF_1496 cef7780882726d18002233294e2a1e18 683 Gene3D G3DSA:2.40.170.20 188 683 1.3E-63 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XF_1496 cef7780882726d18002233294e2a1e18 683 SUPERFAMILY SSF56935 40 683 3.46E-90 T 14-10-2018 XF_1496 cef7780882726d18002233294e2a1e18 683 Gene3D G3DSA:2.170.130.10 56 174 7.4E-15 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XF_1496 cef7780882726d18002233294e2a1e18 683 Pfam PF00593 TonB dependent receptor 246 681 2.7E-34 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XF_1496 cef7780882726d18002233294e2a1e18 683 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 165 1.6E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain XF_0959 48ab8bd25ee0177a71d1bce8cf39b470 198 Pfam PF02562 PhoH-like protein 6 189 3.6E-50 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 XF_0959 48ab8bd25ee0177a71d1bce8cf39b470 198 SUPERFAMILY SSF52540 10 177 1.2E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0959 48ab8bd25ee0177a71d1bce8cf39b470 198 Gene3D G3DSA:3.40.50.300 1 197 4.6E-59 T 14-10-2018 XF_1120 1754963916764965ff7304c6b959623a 320 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XF_1120 1754963916764965ff7304c6b959623a 320 SUPERFAMILY SSF51391 118 314 1.18E-49 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XF_1120 1754963916764965ff7304c6b959623a 320 SUPERFAMILY SSF55811 8 131 1.49E-32 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XF_1120 1754963916764965ff7304c6b959623a 320 Pfam PF02581 Thiamine monophosphate synthase 136 312 4.6E-44 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XF_1120 1754963916764965ff7304c6b959623a 320 PRINTS PR00502 NUDIX hydrolase family signature 51 66 1.2E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XF_1120 1754963916764965ff7304c6b959623a 320 PRINTS PR00502 NUDIX hydrolase family signature 37 51 1.2E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XF_1120 1754963916764965ff7304c6b959623a 320 Gene3D G3DSA:3.20.20.70 133 318 9.9E-49 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_1120 1754963916764965ff7304c6b959623a 320 Gene3D G3DSA:3.90.79.10 2 132 1.8E-32 T 14-10-2018 XF_1120 1754963916764965ff7304c6b959623a 320 Pfam PF00293 NUDIX domain 11 125 2.1E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XF_2536 7c3dac9d5635f42ea568fade89b9eb4c 212 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 8 204 24.893 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 XF_2536 7c3dac9d5635f42ea568fade89b9eb4c 212 Pfam PF01121 Dephospho-CoA kinase 10 186 5.0E-55 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 XF_2536 7c3dac9d5635f42ea568fade89b9eb4c 212 SUPERFAMILY SSF52540 9 197 2.38E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2536 7c3dac9d5635f42ea568fade89b9eb4c 212 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 11 186 9.7E-47 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 XF_2536 7c3dac9d5635f42ea568fade89b9eb4c 212 Gene3D G3DSA:3.40.50.300 7 210 2.2E-57 T 14-10-2018 XF_2722 a9403d1baecb443d0313391be7d460f5 468 SUPERFAMILY SSF116734 9 216 5.23E-26 T 14-10-2018 XF_2722 a9403d1baecb443d0313391be7d460f5 468 Pfam PF01420 Type I restriction modification DNA specificity domain 319 411 2.3E-5 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XF_2722 a9403d1baecb443d0313391be7d460f5 468 SUPERFAMILY SSF116734 219 438 1.13E-36 T 14-10-2018 XF_2722 a9403d1baecb443d0313391be7d460f5 468 Gene3D G3DSA:3.90.220.20 223 430 1.0E-33 T 14-10-2018 XF_2722 a9403d1baecb443d0313391be7d460f5 468 Gene3D G3DSA:3.90.220.20 12 214 7.4E-21 T 14-10-2018 XF_1561 1cbaccd082976440c389e570ac100596 251 SUPERFAMILY SSF57938 166 205 5.36E-5 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily XF_1794 cb80b35468e8a436e0c8ed9570f36375 208 Gene3D G3DSA:3.30.70.1070 107 173 6.5E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XF_1794 cb80b35468e8a436e0c8ed9570f36375 208 Pfam PF05036 Sporulation related domain 66 137 3.9E-6 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 XF_0474 c18db4fc17ad41c2f41eaf39cc9f6e8d 162 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 18 140 1.8E-39 T 14-10-2018 IPR013362 Pilus modification type IV, PilV XF_0474 c18db4fc17ad41c2f41eaf39cc9f6e8d 162 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 38 6.5E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_1441 dd270b98d179612d312da01936a13d19 152 Pfam PF00293 NUDIX domain 12 119 1.0E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XF_1441 dd270b98d179612d312da01936a13d19 152 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XF_1441 dd270b98d179612d312da01936a13d19 152 SUPERFAMILY SSF55811 6 139 8.67E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XF_1441 dd270b98d179612d312da01936a13d19 152 Gene3D G3DSA:3.90.79.10 4 151 9.2E-36 T 14-10-2018 XF_2304 8cb5ea9edb867b2311dc2d36f50a1c06 83 Pfam PF11140 Protein of unknown function (DUF2913) 3 80 1.2E-16 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 XF_0339 2c45731bb7c888812639ee402de026be 927 Gene3D G3DSA:2.170.130.10 39 179 1.5E-37 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XF_0339 2c45731bb7c888812639ee402de026be 927 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 175 1.9E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain XF_0339 2c45731bb7c888812639ee402de026be 927 Pfam PF00593 TonB dependent receptor 390 924 6.8E-51 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XF_0339 2c45731bb7c888812639ee402de026be 927 SUPERFAMILY SSF56935 44 926 2.97E-100 T 14-10-2018 XF_0047 f25eb8201a2f88c8ce9c02ef720be8b7 155 PIRSF PIRSF001399 7 153 6.6E-53 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XF_0047 f25eb8201a2f88c8ce9c02ef720be8b7 155 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 25 149 7.0E-54 T 14-10-2018 XF_0047 f25eb8201a2f88c8ce9c02ef720be8b7 155 ProSitePatterns PS01029 Dehydroquinase class II signature. 14 31 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XF_0047 f25eb8201a2f88c8ce9c02ef720be8b7 155 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 11 149 7.8E-53 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XF_0047 f25eb8201a2f88c8ce9c02ef720be8b7 155 SUPERFAMILY SSF52304 10 152 8.9E-57 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XF_0047 f25eb8201a2f88c8ce9c02ef720be8b7 155 Gene3D G3DSA:3.40.50.9100 3 154 2.1E-59 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XF_0047 f25eb8201a2f88c8ce9c02ef720be8b7 155 Pfam PF01220 Dehydroquinase class II 11 147 1.8E-54 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XF_0047 f25eb8201a2f88c8ce9c02ef720be8b7 155 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 155 67.4 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XF_0531 57e2b4def4c3659080684f337d3cc752 334 Gene3D G3DSA:2.40.10.10 105 219 1.3E-23 T 14-10-2018 XF_0531 57e2b4def4c3659080684f337d3cc752 334 Gene3D G3DSA:2.40.10.10 224 330 1.0E-7 T 14-10-2018 XF_0531 57e2b4def4c3659080684f337d3cc752 334 SUPERFAMILY SSF50494 110 307 3.16E-22 T 14-10-2018 IPR009003 Peptidase S1, PA clan XF_1813 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 Gene3D G3DSA:3.40.50.300 10 207 3.9E-44 T 14-10-2018 XF_1813 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 PIRSF PIRSF002849 2 317 9.5E-119 T 14-10-2018 XF_1813 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 Gene3D G3DSA:1.10.8.300 210 314 4.9E-26 T 14-10-2018 XF_1813 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 SUPERFAMILY SSF52540 19 290 2.62E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1813 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 48 178 2.3E-62 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 XF_0315 12f623df3b9d00056868bf7009e7142d 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 6.6E-23 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like XF_0315 12f623df3b9d00056868bf7009e7142d 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 19.871 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 XF_1348 d338088f5b174057ffba742c66a1bf84 316 PIRSF PIRSF026649 1 296 1.4E-67 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XF_1348 d338088f5b174057ffba742c66a1bf84 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 285 5.3E-35 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XF_2603 2f93ecf397aa03f069397da0c59f8926 176 SUPERFAMILY SSF89360 2 76 3.53E-8 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XF_2603 2f93ecf397aa03f069397da0c59f8926 176 Gene3D G3DSA:3.30.300.130 81 165 4.0E-21 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XF_2603 2f93ecf397aa03f069397da0c59f8926 176 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 97 156 5.0E-28 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 XF_2603 2f93ecf397aa03f069397da0c59f8926 176 Pfam PF01106 NifU-like domain 93 156 1.0E-19 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 XF_2603 2f93ecf397aa03f069397da0c59f8926 176 SUPERFAMILY SSF117916 82 163 4.8E-22 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XF_1817 db78e307f4d82c96f9e3faedbfe8cba4 324 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 1.6E-35 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XF_1817 db78e307f4d82c96f9e3faedbfe8cba4 324 Gene3D G3DSA:3.40.47.10 2 324 1.9E-131 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 XF_1817 db78e307f4d82c96f9e3faedbfe8cba4 324 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 324 71.89 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XF_1817 db78e307f4d82c96f9e3faedbfe8cba4 324 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 187 3.7E-34 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XF_1817 db78e307f4d82c96f9e3faedbfe8cba4 324 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 323 1.7E-136 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XF_1817 db78e307f4d82c96f9e3faedbfe8cba4 324 SUPERFAMILY SSF53901 7 324 3.61E-70 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 XF_0077 c9a0c32bfa43239642487a30b389a0ab 356 Gene3D G3DSA:2.60.40.1090 207 356 1.7E-32 T 14-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XF_0077 c9a0c32bfa43239642487a30b389a0ab 356 SUPERFAMILY SSF49401 204 356 8.45E-27 T 14-10-2018 IPR008966 Adhesion domain superfamily XF_0077 c9a0c32bfa43239642487a30b389a0ab 356 Pfam PF00419 Fimbrial protein 203 356 3.0E-21 T 14-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 XF_0077 c9a0c32bfa43239642487a30b389a0ab 356 Gene3D G3DSA:2.60.40.3310 41 206 3.1E-44 T 14-10-2018 XF_0911 0ac8c513b07c38128103ea9cc6edd991 211 Gene3D G3DSA:3.40.30.10 11 200 1.7E-67 T 14-10-2018 XF_0911 0ac8c513b07c38128103ea9cc6edd991 211 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 4.9E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 XF_0911 0ac8c513b07c38128103ea9cc6edd991 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 193 1.7E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal XF_0911 0ac8c513b07c38128103ea9cc6edd991 211 Gene3D G3DSA:1.20.1050.10 89 192 1.7E-67 T 14-10-2018 XF_0911 0ac8c513b07c38128103ea9cc6edd991 211 SUPERFAMILY SSF52833 10 111 1.1E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_0911 0ac8c513b07c38128103ea9cc6edd991 211 SUPERFAMILY SSF47616 82 206 9.81E-24 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XF_2080 d5034e8de0072e04432b2255f3ae82df 93 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 91 5.8E-26 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XF_2080 d5034e8de0072e04432b2255f3ae82df 93 Gene3D G3DSA:3.30.2310.20 1 93 1.0E-27 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XF_2080 d5034e8de0072e04432b2255f3ae82df 93 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 2 91 2.3E-28 T 14-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin XF_2080 d5034e8de0072e04432b2255f3ae82df 93 SUPERFAMILY SSF143011 3 91 3.34E-22 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XF_2080 d5034e8de0072e04432b2255f3ae82df 93 PIRSF PIRSF006156 1 92 1.3E-22 T 14-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin XF_2708 d90031bac19fa99be7f4bed8f818d303 356 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 162 171 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 XF_2708 d90031bac19fa99be7f4bed8f818d303 356 Gene3D G3DSA:3.20.20.80 37 353 8.3E-93 T 14-10-2018 XF_2708 d90031bac19fa99be7f4bed8f818d303 356 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 58 316 3.1E-48 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 XF_2708 d90031bac19fa99be7f4bed8f818d303 356 SUPERFAMILY SSF51445 37 341 1.04E-74 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily XF_1841 c7a8696895128381d0c17660a2e152d2 291 Pfam PF02673 Bacitracin resistance protein BacA 37 285 5.8E-70 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 XF_1841 c7a8696895128381d0c17660a2e152d2 291 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 32 290 16.288 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 XF_1360 1fab2067462eeb1d06400dcfc62826cd 303 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 6 294 19.498 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 XF_1360 1fab2067462eeb1d06400dcfc62826cd 303 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 8 292 9.7E-90 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 XF_1360 1fab2067462eeb1d06400dcfc62826cd 303 Pfam PF01040 UbiA prenyltransferase family 23 274 5.1E-55 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 XF_1360 1fab2067462eeb1d06400dcfc62826cd 303 Gene3D G3DSA:1.10.357.140 15 192 7.0E-18 T 14-10-2018 XF_1360 1fab2067462eeb1d06400dcfc62826cd 303 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 64 86 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site XF_1509 01b93f6a72066cc3736de263e3a62716 112 Pfam PF07238 PilZ domain 24 108 4.5E-7 T 14-10-2018 IPR009875 PilZ domain GO:0035438 XF_1509 01b93f6a72066cc3736de263e3a62716 112 Gene3D G3DSA:2.40.10.220 2 111 3.8E-7 T 14-10-2018 XF_0884 cebccaa6a5934bdf44d1677e56f0cd03 792 SUPERFAMILY SSF53955 149 350 1.32E-54 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_0884 cebccaa6a5934bdf44d1677e56f0cd03 792 Gene3D G3DSA:3.40.710.10 49 709 2.0E-215 T 14-10-2018 XF_0884 cebccaa6a5934bdf44d1677e56f0cd03 792 Gene3D G3DSA:1.10.3810.10 147 353 2.0E-215 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0884 cebccaa6a5934bdf44d1677e56f0cd03 792 SUPERFAMILY SSF56601 311 753 1.34E-96 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XF_0884 cebccaa6a5934bdf44d1677e56f0cd03 792 Pfam PF14814 Bifunctional transglycosylase second domain 59 143 1.2E-19 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0884 cebccaa6a5934bdf44d1677e56f0cd03 792 Gene3D G3DSA:3.30.2060.10 57 146 2.0E-215 T 14-10-2018 XF_0884 cebccaa6a5934bdf44d1677e56f0cd03 792 Pfam PF00905 Penicillin binding protein transpeptidase domain 427 676 5.5E-15 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XF_0884 cebccaa6a5934bdf44d1677e56f0cd03 792 PIRSF PIRSF002799 4 770 4.1E-263 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0884 cebccaa6a5934bdf44d1677e56f0cd03 792 Pfam PF00912 Transglycosylase 150 329 9.8E-51 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0884 cebccaa6a5934bdf44d1677e56f0cd03 792 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 14 748 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_1644 957ae6fb7447ee545d60b0957a9081eb 151 PIRSF PIRSF002070 1 151 1.4E-34 T 14-10-2018 XF_1644 957ae6fb7447ee545d60b0957a9081eb 151 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 34.484 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XF_1644 957ae6fb7447ee545d60b0957a9081eb 151 SUPERFAMILY SSF50249 3 151 9.94E-48 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1644 957ae6fb7447ee545d60b0957a9081eb 151 Pfam PF00436 Single-strand binding protein family 5 108 6.8E-38 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XF_1644 957ae6fb7447ee545d60b0957a9081eb 151 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 126 1.8E-44 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XF_1644 957ae6fb7447ee545d60b0957a9081eb 151 Gene3D G3DSA:2.40.50.140 1 124 7.1E-43 T 14-10-2018 XF_2096 6e35c31c3d08f750c7ad934d6fae54c9 299 Pfam PF02649 Type I GTP cyclohydrolase folE2 7 294 4.1E-66 T 14-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 XF_2096 6e35c31c3d08f750c7ad934d6fae54c9 299 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 6 299 32.242 T 14-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 XF_1399 ab967cafb65713821d9d89d60a7c2932 175 SUPERFAMILY SSF54593 12 173 8.99E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XF_1399 ab967cafb65713821d9d89d60a7c2932 175 ProSitePatterns PS00935 Glyoxalase I signature 2. 112 128 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 XF_1399 ab967cafb65713821d9d89d60a7c2932 175 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 18 172 6.2E-45 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 XF_1399 ab967cafb65713821d9d89d60a7c2932 175 ProSitePatterns PS00934 Glyoxalase I signature 1. 27 48 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 XF_1399 ab967cafb65713821d9d89d60a7c2932 175 Gene3D G3DSA:3.10.180.10 3 172 7.8E-58 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XF_1399 ab967cafb65713821d9d89d60a7c2932 175 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 25 168 5.7E-21 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain XF_0115 d5f6c94df47736c63d6e8198f69ff9b3 124 Gene3D G3DSA:3.40.30.10 7 121 1.6E-32 T 14-10-2018 XF_0115 d5f6c94df47736c63d6e8198f69ff9b3 124 SUPERFAMILY SSF52833 7 120 7.35E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_0115 d5f6c94df47736c63d6e8198f69ff9b3 124 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 9 117 1.8E-25 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR XF_0115 d5f6c94df47736c63d6e8198f69ff9b3 124 Pfam PF03960 ArsC family 14 119 2.8E-13 T 14-10-2018 IPR006660 Arsenate reductase-like XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 SMART SM00388 214 278 5.8E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 SUPERFAMILY SSF47384 201 278 9.81E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 429 5.5E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 Gene3D G3DSA:1.10.287.130 209 279 8.4E-24 T 14-10-2018 XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 3.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 3.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 3.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 430 3.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 SMART SM00387 321 433 1.8E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 SUPERFAMILY SSF55785 91 166 2.38E-6 T 14-10-2018 IPR035965 PAS domain superfamily XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 Pfam PF13188 PAS domain 107 157 2.1E-4 T 14-10-2018 IPR000014 PAS domain XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 SUPERFAMILY SSF55874 267 429 1.96E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 Gene3D G3DSA:3.30.565.10 280 439 4.2E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 Pfam PF11808 Domain of unknown function (DUF3329) 14 97 2.2E-17 T 14-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 277 8.1E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XF_2592 ab50c7c6a346de90f9281bc7df71fd22 446 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 102 429 1.7E-121 T 14-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 XF_0387 350fa848db5ca90b60c218cc810c9dad 340 Gene3D G3DSA:1.20.120.1460 262 335 3.5E-16 T 14-10-2018 XF_0387 350fa848db5ca90b60c218cc810c9dad 340 Pfam PF01207 Dihydrouridine synthase (Dus) 20 323 5.4E-71 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 XF_0387 350fa848db5ca90b60c218cc810c9dad 340 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 12 332 47.216 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 XF_0387 350fa848db5ca90b60c218cc810c9dad 340 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 99 117 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 XF_0387 350fa848db5ca90b60c218cc810c9dad 340 PIRSF PIRSF006621 5 340 2.7E-78 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 XF_0387 350fa848db5ca90b60c218cc810c9dad 340 SUPERFAMILY SSF51395 17 311 4.58E-63 T 14-10-2018 XF_0387 350fa848db5ca90b60c218cc810c9dad 340 Gene3D G3DSA:3.20.20.70 15 255 2.4E-67 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_2007 aa7cba501d60491b2b193c6a3086c4dd 191 Gene3D G3DSA:3.40.109.10 7 169 5.5E-35 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 XF_2007 aa7cba501d60491b2b193c6a3086c4dd 191 SUPERFAMILY SSF55469 8 188 8.51E-32 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 XF_2007 aa7cba501d60491b2b193c6a3086c4dd 191 PIRSF PIRSF000232 3 191 1.5E-60 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like XF_2007 aa7cba501d60491b2b193c6a3086c4dd 191 Pfam PF00881 Nitroreductase family 12 168 2.0E-20 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 XF_1452 da0939b615a6a681c170a0b66012bca5 214 SUPERFAMILY SSF89392 31 212 8.63E-39 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX XF_1452 da0939b615a6a681c170a0b66012bca5 214 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 14 213 29.396 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 XF_1452 da0939b615a6a681c170a0b66012bca5 214 Gene3D G3DSA:2.50.20.10 29 214 3.3E-40 T 14-10-2018 XF_1452 da0939b615a6a681c170a0b66012bca5 214 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 203 2.9E-47 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like XF_1752 9f8241e699013cb7e365d13005868037 324 Gene3D G3DSA:3.40.190.10 166 268 6.7E-50 T 14-10-2018 XF_1752 9f8241e699013cb7e365d13005868037 324 Pfam PF03466 LysR substrate binding domain 90 294 4.0E-33 T 14-10-2018 IPR005119 LysR, substrate-binding XF_1752 9f8241e699013cb7e365d13005868037 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 8.4E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1752 9f8241e699013cb7e365d13005868037 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1752 9f8241e699013cb7e365d13005868037 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1752 9f8241e699013cb7e365d13005868037 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XF_1752 9f8241e699013cb7e365d13005868037 324 SUPERFAMILY SSF53850 90 295 2.17E-39 T 14-10-2018 XF_1752 9f8241e699013cb7e365d13005868037 324 Gene3D G3DSA:1.10.10.10 4 93 4.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1752 9f8241e699013cb7e365d13005868037 324 SUPERFAMILY SSF46785 5 90 1.32E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_1752 9f8241e699013cb7e365d13005868037 324 Gene3D G3DSA:3.40.190.10 94 293 6.7E-50 T 14-10-2018 XF_1070 cad27f83022da723b86b1ce1ae6eded1 142 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 14 129 2.4E-24 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1070 cad27f83022da723b86b1ce1ae6eded1 142 SUPERFAMILY SSF81343 14 135 8.01E-32 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1070 cad27f83022da723b86b1ce1ae6eded1 142 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 16 133 2.4E-36 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1070 cad27f83022da723b86b1ce1ae6eded1 142 PIRSF PIRSF000178 6 136 1.3E-37 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1070 cad27f83022da723b86b1ce1ae6eded1 142 Gene3D G3DSA:1.20.1300.10 7 139 3.4E-34 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_1070 cad27f83022da723b86b1ce1ae6eded1 142 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 17 41 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XF_2555 61bf00cd0f4cb7626f59f68e6a2a11f4 301 PRINTS PR00982 Lysyl-tRNA synthetase signature 7 17 8.0E-7 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XF_2555 61bf00cd0f4cb7626f59f68e6a2a11f4 301 PRINTS PR00982 Lysyl-tRNA synthetase signature 185 201 8.0E-7 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XF_2555 61bf00cd0f4cb7626f59f68e6a2a11f4 301 PRINTS PR00982 Lysyl-tRNA synthetase signature 75 92 8.0E-7 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XF_2555 61bf00cd0f4cb7626f59f68e6a2a11f4 301 Pfam PF00152 tRNA synthetases class II (D, K and N) 2 297 3.2E-31 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XF_2555 61bf00cd0f4cb7626f59f68e6a2a11f4 301 SUPERFAMILY SSF55681 2 296 2.81E-65 T 14-10-2018 XF_2555 61bf00cd0f4cb7626f59f68e6a2a11f4 301 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 2 296 2.2E-110 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 XF_2555 61bf00cd0f4cb7626f59f68e6a2a11f4 301 Gene3D G3DSA:3.30.930.10 1 300 2.8E-89 T 14-10-2018 XF_1458 43d0a6741c0e44d76c8dd85e428bf53c 398 Gene3D G3DSA:3.40.50.12710 10 398 5.4E-112 T 14-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 XF_1458 43d0a6741c0e44d76c8dd85e428bf53c 398 SUPERFAMILY SSF53335 25 382 8.75E-85 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_1458 43d0a6741c0e44d76c8dd85e428bf53c 398 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 83 326 5.0E-47 T 14-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 XF_0031 fefb3543a103dc582c4c943e2feaa148 195 Pfam PF14341 PilX N-terminal 12 62 3.4E-15 T 14-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain XF_0031 fefb3543a103dc582c4c943e2feaa148 195 Pfam PF13681 Type IV pilus assembly protein PilX C-term 89 193 9.0E-12 T 14-10-2018 IPR025205 PilX/PilW C-terminal domain XF_1873 8a81933b79fb27a071881903ef86b766 115 Pfam PF12375 Phage protein 14 64 6.1E-5 T 14-10-2018 IPR021077 Bacteriophage phi-Lf, Orf112 XF_1864 9288173175babd1927257fc6da45bf30 144 Pfam PF12472 Phage related protein 64 120 6.3E-19 T 14-10-2018 IPR021096 Vibrio phage VSK, Orf152 XF_1595 942fddabbaef642b688f914adaa18595 117 SUPERFAMILY SSF160719 24 106 2.62E-6 T 14-10-2018 XF_0026 23be20abd9e5265b89c20b1fb19ead8c 380 Gene3D G3DSA:3.20.20.70 19 366 1.4E-158 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_0026 23be20abd9e5265b89c20b1fb19ead8c 380 SUPERFAMILY SSF51569 23 364 4.81E-134 T 14-10-2018 XF_0026 23be20abd9e5265b89c20b1fb19ead8c 380 PIRSF PIRSF001361 15 367 1.9E-156 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 XF_0026 23be20abd9e5265b89c20b1fb19ead8c 380 Pfam PF00793 DAHP synthetase I family 57 354 8.8E-97 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XF_0026 23be20abd9e5265b89c20b1fb19ead8c 380 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 22 364 1.5E-158 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 XF_0184 8684475457ebc9cacc5a99d932550cae 144 Pfam PF01957 NfeD-like C-terminal, partner-binding 9 143 2.0E-24 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain XF_0087 7fcfbc7f93e93e4c7747f309a9d8dc9e 435 Gene3D G3DSA:1.20.1250.20 20 430 8.7E-63 T 14-10-2018 XF_0087 7fcfbc7f93e93e4c7747f309a9d8dc9e 435 Pfam PF00083 Sugar (and other) transporter 23 221 6.8E-24 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 XF_0087 7fcfbc7f93e93e4c7747f309a9d8dc9e 435 Pfam PF00083 Sugar (and other) transporter 228 420 2.4E-9 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 XF_0087 7fcfbc7f93e93e4c7747f309a9d8dc9e 435 SUPERFAMILY SSF103473 17 427 5.62E-63 T 14-10-2018 IPR036259 MFS transporter superfamily XF_0087 7fcfbc7f93e93e4c7747f309a9d8dc9e 435 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 XF_0407 70fd7b6d7c62d82c39b74b3e4a93d956 389 Gene3D G3DSA:2.30.130.10 9 71 1.1E-15 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 XF_0407 70fd7b6d7c62d82c39b74b3e4a93d956 389 Gene3D G3DSA:3.40.50.150 178 388 1.9E-67 T 14-10-2018 XF_0407 70fd7b6d7c62d82c39b74b3e4a93d956 389 Gene3D G3DSA:3.30.750.80 72 177 3.3E-26 T 14-10-2018 XF_0407 70fd7b6d7c62d82c39b74b3e4a93d956 389 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 174 329 1.6E-17 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 XF_0407 70fd7b6d7c62d82c39b74b3e4a93d956 389 SUPERFAMILY SSF88697 12 69 7.7E-10 T 14-10-2018 IPR015947 PUA-like superfamily XF_0407 70fd7b6d7c62d82c39b74b3e4a93d956 389 SUPERFAMILY SSF53335 78 383 3.08E-66 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_1144 c1296956287eb8cabcd89cb69ffd2ecf 287 Pfam PF00231 ATP synthase 5 286 3.0E-93 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1144 c1296956287eb8cabcd89cb69ffd2ecf 287 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 7.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1144 c1296956287eb8cabcd89cb69ffd2ecf 287 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 7.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1144 c1296956287eb8cabcd89cb69ffd2ecf 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 7.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1144 c1296956287eb8cabcd89cb69ffd2ecf 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 7.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1144 c1296956287eb8cabcd89cb69ffd2ecf 287 Gene3D G3DSA:1.10.287.80 6 283 1.0E-105 T 14-10-2018 XF_1144 c1296956287eb8cabcd89cb69ffd2ecf 287 Gene3D G3DSA:3.40.1380.10 61 206 1.0E-105 T 14-10-2018 XF_1144 c1296956287eb8cabcd89cb69ffd2ecf 287 SUPERFAMILY SSF52943 2 287 1.83E-91 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1144 c1296956287eb8cabcd89cb69ffd2ecf 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 35.747 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1144 c1296956287eb8cabcd89cb69ffd2ecf 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 3.0E-104 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_1144 c1296956287eb8cabcd89cb69ffd2ecf 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XF_0904 3dcb3dd2732fe14fa870218335bd30c6 327 Gene3D G3DSA:3.40.50.300 110 315 5.0E-69 T 14-10-2018 XF_0904 3dcb3dd2732fe14fa870218335bd30c6 327 SUPERFAMILY SSF52540 118 287 3.48E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0904 3dcb3dd2732fe14fa870218335bd30c6 327 Pfam PF02562 PhoH-like protein 112 315 2.6E-91 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 XF_2395 7643dd93e4fdfa05a3cc2d17f837d38c 286 Gene3D G3DSA:3.20.20.370 90 285 2.7E-46 T 14-10-2018 XF_2395 7643dd93e4fdfa05a3cc2d17f837d38c 286 SUPERFAMILY SSF88713 93 282 1.75E-50 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XF_2395 7643dd93e4fdfa05a3cc2d17f837d38c 286 Pfam PF01522 Polysaccharide deacetylase 101 221 3.4E-28 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XF_1068 124288d546b318da2fd7dc186ccedab2 305 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 220 279 1.5E-4 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 XF_1068 124288d546b318da2fd7dc186ccedab2 305 Gene3D G3DSA:3.30.70.1400 37 123 1.8E-17 T 14-10-2018 XF_1068 124288d546b318da2fd7dc186ccedab2 305 Gene3D G3DSA:2.40.30.160 190 290 6.9E-22 T 14-10-2018 XF_1068 124288d546b318da2fd7dc186ccedab2 305 SUPERFAMILY SSF103025 27 236 6.28E-45 T 14-10-2018 XF_1068 124288d546b318da2fd7dc186ccedab2 305 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 244 1.9E-21 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site XF_2436 1199f6a843c0536198965482437879be 107 Pfam PF06305 Lipopolysaccharide assembly protein A domain 32 89 7.0E-9 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 XF_0754 20aa3b52f1f186d837ecd1d2d815ab0e 237 Gene3D G3DSA:3.40.50.1820 17 221 2.3E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0754 20aa3b52f1f186d837ecd1d2d815ab0e 237 Pfam PF06057 Bacterial virulence protein (VirJ) 34 224 3.5E-86 T 14-10-2018 IPR010333 Bacterial virulence XF_0754 20aa3b52f1f186d837ecd1d2d815ab0e 237 SUPERFAMILY SSF53474 29 221 1.88E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_0754 20aa3b52f1f186d837ecd1d2d815ab0e 237 PIRSF PIRSF029063 4 229 1.7E-89 T 14-10-2018 IPR011225 Type IV secretory pathway, VirJ component XF_0536 a67e5ba973158802d9b17ff8b5f857c8 390 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 248 316 2.5E-6 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal XF_0536 a67e5ba973158802d9b17ff8b5f857c8 390 Pfam PF01385 Probable transposase 163 277 1.1E-21 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 XF_0536 a67e5ba973158802d9b17ff8b5f857c8 390 Pfam PF07282 Putative transposase DNA-binding domain 291 360 1.2E-22 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal XF_1484 74d8435c84b9c0d026225426a9604df1 178 SUPERFAMILY SSF56235 4 175 3.87E-54 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XF_1484 74d8435c84b9c0d026225426a9604df1 178 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 7 178 40.675 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 XF_1484 74d8435c84b9c0d026225426a9604df1 178 PIRSF PIRSF039093 1 178 5.2E-82 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 XF_1484 74d8435c84b9c0d026225426a9604df1 178 Pfam PF00227 Proteasome subunit 4 175 5.4E-22 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 XF_1484 74d8435c84b9c0d026225426a9604df1 178 Gene3D G3DSA:3.60.20.10 3 178 1.4E-63 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XF_1484 74d8435c84b9c0d026225426a9604df1 178 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 8 178 3.5E-81 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 XF_1999 8ac643a3013df501251a64d0374c10a2 362 Gene3D G3DSA:3.30.470.10 28 356 2.1E-130 T 14-10-2018 XF_1999 8ac643a3013df501251a64d0374c10a2 362 ProSitePatterns PS00770 Aminotransferases class-IV signature. 236 266 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 XF_1999 8ac643a3013df501251a64d0374c10a2 362 PIRSF PIRSF006468 4 362 2.5E-130 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 XF_1999 8ac643a3013df501251a64d0374c10a2 362 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 47 359 8.8E-147 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 XF_1999 8ac643a3013df501251a64d0374c10a2 362 Gene3D G3DSA:3.20.10.10 174 343 2.1E-130 T 14-10-2018 XF_1999 8ac643a3013df501251a64d0374c10a2 362 Pfam PF01063 Amino-transferase class IV 73 316 1.6E-33 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 XF_1999 8ac643a3013df501251a64d0374c10a2 362 SUPERFAMILY SSF56752 3 357 5.36E-111 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 XF_0374 e66083ddc012d0c775d4d74e2da00069 255 Pfam PF01569 PAP2 superfamily 112 238 3.0E-8 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XF_0374 e66083ddc012d0c775d4d74e2da00069 255 SUPERFAMILY SSF48317 22 242 2.62E-14 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XF_1978 80ecae88c1c7e53bafe58e7a506c9fb6 740 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 19 719 2.7E-201 T 14-10-2018 IPR010020 Integral membrane protein, YccS/YhfK XF_1978 80ecae88c1c7e53bafe58e7a506c9fb6 740 Pfam PF13515 Fusaric acid resistance protein-like 416 536 1.5E-19 T 14-10-2018 XF_1978 80ecae88c1c7e53bafe58e7a506c9fb6 740 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 20 719 4.5E-189 T 14-10-2018 IPR010019 Integral membrane protein, YccS XF_1978 80ecae88c1c7e53bafe58e7a506c9fb6 740 Pfam PF12805 FUSC-like inner membrane protein yccS 77 359 1.2E-96 T 14-10-2018 IPR032692 Integral membrane protein YccS, N-terminal XF_2411 f9b9663695d07337e1ecb41d9efb5419 777 SUPERFAMILY SSF52540 26 619 1.29E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2411 f9b9663695d07337e1ecb41d9efb5419 777 Pfam PF13166 AAA domain 202 695 1.5E-33 T 14-10-2018 IPR026866 Protein CR006, P-loop domain XF_2411 f9b9663695d07337e1ecb41d9efb5419 777 Pfam PF13166 AAA domain 24 169 1.4E-11 T 14-10-2018 IPR026866 Protein CR006, P-loop domain XF_2411 f9b9663695d07337e1ecb41d9efb5419 777 Gene3D G3DSA:3.40.50.300 14 258 2.1E-5 T 14-10-2018 XF_2411 f9b9663695d07337e1ecb41d9efb5419 777 Gene3D G3DSA:3.40.50.300 356 628 1.4E-13 T 14-10-2018 XF_2210 c8a89ca376f3cfe67bc71cce3051065f 188 Gene3D G3DSA:2.60.120.10 2 157 1.1E-50 T 14-10-2018 IPR014710 RmlC-like jelly roll fold XF_2210 c8a89ca376f3cfe67bc71cce3051065f 188 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.032 T 14-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 XF_2210 c8a89ca376f3cfe67bc71cce3051065f 188 Pfam PF03079 ARD/ARD' family 4 164 1.1E-33 T 14-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 XF_2210 c8a89ca376f3cfe67bc71cce3051065f 188 SUPERFAMILY SSF51182 3 179 4.29E-40 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily XF_2492 8ef57673d76a9794ea6d818d04d10014 195 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 193 9.2E-64 T 14-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 XF_2492 8ef57673d76a9794ea6d818d04d10014 195 Gene3D G3DSA:2.60.220.40 90 157 8.2E-12 T 14-10-2018 XF_2492 8ef57673d76a9794ea6d818d04d10014 195 Gene3D G3DSA:2.40.50.230 1 87 4.2E-26 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XF_2492 8ef57673d76a9794ea6d818d04d10014 195 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 118 7.7E-34 T 14-10-2018 IPR006531 Gp5 N-terminal XF_0143 a04fb75d396ebb2aa27c4830cd2126f9 285 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 83 96 - T 14-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XF_0143 a04fb75d396ebb2aa27c4830cd2126f9 285 Pfam PF17284 Spermidine synthase tetramerisation domain 7 58 1.2E-10 T 14-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XF_0143 a04fb75d396ebb2aa27c4830cd2126f9 285 Gene3D G3DSA:3.40.50.150 59 285 1.5E-60 T 14-10-2018 XF_0143 a04fb75d396ebb2aa27c4830cd2126f9 285 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 36.493 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XF_0143 a04fb75d396ebb2aa27c4830cd2126f9 285 SUPERFAMILY SSF53335 7 284 3.67E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0143 a04fb75d396ebb2aa27c4830cd2126f9 285 Gene3D G3DSA:2.30.140.10 3 58 8.0E-19 T 14-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XF_0143 a04fb75d396ebb2aa27c4830cd2126f9 285 Pfam PF01564 Spermine/spermidine synthase domain 63 246 8.7E-52 T 14-10-2018 XF_0143 a04fb75d396ebb2aa27c4830cd2126f9 285 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 1.3E-79 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XF_0803 d923bb8bde03d10e36180006bd6ee473 304 Gene3D G3DSA:3.30.1700.10 128 303 2.6E-63 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XF_0803 d923bb8bde03d10e36180006bd6ee473 304 Gene3D G3DSA:3.30.230.20 1 127 1.7E-47 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XF_0803 d923bb8bde03d10e36180006bd6ee473 304 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3 292 1.4E-114 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XF_0803 d923bb8bde03d10e36180006bd6ee473 304 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 46.09 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XF_0803 d923bb8bde03d10e36180006bd6ee473 304 SUPERFAMILY SSF54211 3 124 6.83E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_0803 d923bb8bde03d10e36180006bd6ee473 304 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 4.4E-103 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XF_0803 d923bb8bde03d10e36180006bd6ee473 304 SUPERFAMILY SSF54211 134 277 4.63E-49 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XF_1165 7047e31d82195c45bed711f45a86c6c6 101 Gene3D G3DSA:4.10.830.10 41 101 6.0E-21 T 14-10-2018 XF_1165 7047e31d82195c45bed711f45a86c6c6 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.818 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid XF_1165 7047e31d82195c45bed711f45a86c6c6 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.3E-24 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1165 7047e31d82195c45bed711f45a86c6c6 101 SUPERFAMILY SSF57716 2 101 4.7E-35 T 14-10-2018 XF_2483 e487dc5d1e9c9605419aec3618e7aee2 95 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 20 93 8.3E-14 T 14-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative XF_1944 e6603daddcc422a1d2cadd4f62ccdf83 716 SUPERFAMILY SSF55486 36 714 3.0E-180 T 14-10-2018 XF_1944 e6603daddcc422a1d2cadd4f62ccdf83 716 Gene3D G3DSA:1.10.1370.10 177 647 4.4E-246 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 XF_1944 e6603daddcc422a1d2cadd4f62ccdf83 716 Gene3D G3DSA:1.10.1370.40 66 709 4.4E-246 T 14-10-2018 XF_1944 e6603daddcc422a1d2cadd4f62ccdf83 716 Pfam PF01432 Peptidase family M3 263 714 2.0E-132 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 XF_1063 cc364dd9573ed48c78b36329b9debf8e 239 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 225 2.8E-44 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 XF_1063 cc364dd9573ed48c78b36329b9debf8e 239 SUPERFAMILY SSF100950 10 232 3.05E-44 T 14-10-2018 IPR037171 NagB/RpiA transferase-like XF_1063 cc364dd9573ed48c78b36329b9debf8e 239 Gene3D G3DSA:3.40.50.1360 6 239 2.5E-51 T 14-10-2018 XF_0372 00c99d10fd378ed9245e2bf5de9d365e 176 PIRSF PIRSF016481 3 176 8.7E-74 T 14-10-2018 IPR007446 Pilus assembly protein PilP XF_0372 00c99d10fd378ed9245e2bf5de9d365e 176 Pfam PF04351 Pilus assembly protein, PilP 34 173 4.2E-47 T 14-10-2018 IPR007446 Pilus assembly protein PilP XF_0372 00c99d10fd378ed9245e2bf5de9d365e 176 Gene3D G3DSA:2.30.30.830 82 174 1.0E-30 T 14-10-2018 XF_0543 a363f73a78bedfdcda3449f125a258a8 222 PIRSF PIRSF028583 4 222 1.7E-102 T 14-10-2018 IPR016892 Uncharacterised conserved protein UCP028583 XF_0080 c51550b90152d8f5222ce343f57bb34a 320 Pfam PF00419 Fimbrial protein 162 320 7.7E-15 T 14-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 XF_0080 c51550b90152d8f5222ce343f57bb34a 320 Gene3D G3DSA:2.60.40.1090 173 320 2.6E-28 T 14-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XF_0080 c51550b90152d8f5222ce343f57bb34a 320 SUPERFAMILY SSF49401 168 320 3.38E-24 T 14-10-2018 IPR008966 Adhesion domain superfamily XF_0080 c51550b90152d8f5222ce343f57bb34a 320 Gene3D G3DSA:2.60.40.3310 8 172 7.8E-34 T 14-10-2018 XF_2760 2f7be6597cebb9fdada54dd02f96ad2a 253 Pfam PF12811 Bax inhibitor 1 like 25 251 1.7E-79 T 14-10-2018 IPR010539 Protein of unknown function UCP009160 XF_2760 2f7be6597cebb9fdada54dd02f96ad2a 253 PIRSF PIRSF009160 1 253 5.1E-102 T 14-10-2018 IPR010539 Protein of unknown function UCP009160 XF_2346 fe088c305fba49b5bc60994f7b37ff07 80 SUPERFAMILY SSF54285 1 66 6.76E-13 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp XF_2346 fe088c305fba49b5bc60994f7b37ff07 80 Gene3D G3DSA:3.10.20.280 1 76 1.4E-16 T 14-10-2018 IPR037021 RnfH superfamily XF_2346 fe088c305fba49b5bc60994f7b37ff07 80 Hamap MF_00460 Protein RnfH [rnfH]. 1 80 14.487 T 14-10-2018 IPR005346 RnfH protein XF_2346 fe088c305fba49b5bc60994f7b37ff07 80 Pfam PF03658 RnfH family Ubiquitin 1 74 1.2E-16 T 14-10-2018 IPR005346 RnfH protein XF_2455 62d61c4cb09e789b24b75a6afc27e312 223 SUPERFAMILY SSF52540 18 205 9.35E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2455 62d61c4cb09e789b24b75a6afc27e312 223 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_2455 62d61c4cb09e789b24b75a6afc27e312 223 SMART SM00382 44 223 1.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_2455 62d61c4cb09e789b24b75a6afc27e312 223 Pfam PF00005 ABC transporter 37 174 8.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_2455 62d61c4cb09e789b24b75a6afc27e312 223 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 20 218 5.4E-76 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 XF_2455 62d61c4cb09e789b24b75a6afc27e312 223 Gene3D G3DSA:3.40.50.300 14 222 1.2E-40 T 14-10-2018 XF_1275 79c924cc9a3b56173fc541c1432fd111 173 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 36 153 9.6E-50 T 14-10-2018 IPR008769 Poly granule associated XF_1275 79c924cc9a3b56173fc541c1432fd111 173 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 28 151 2.8E-39 T 14-10-2018 IPR008769 Poly granule associated XF_0907 4a17d8cae6f44df87070415e670c965a 297 Gene3D G3DSA:1.10.530.10 158 290 1.6E-41 T 14-10-2018 XF_0907 4a17d8cae6f44df87070415e670c965a 297 Pfam PF01464 Transglycosylase SLT domain 172 267 8.2E-27 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 XF_0907 4a17d8cae6f44df87070415e670c965a 297 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 187 215 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 XF_0907 4a17d8cae6f44df87070415e670c965a 297 SUPERFAMILY SSF53955 161 289 1.47E-44 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_0118 3eaf7c8c6d73254854bfde2c24afadfd 563 Gene3D G3DSA:3.60.20.10 2 196 1.4E-63 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XF_0118 3eaf7c8c6d73254854bfde2c24afadfd 563 Pfam PF13537 Glutamine amidotransferase domain 50 169 1.8E-40 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain XF_0118 3eaf7c8c6d73254854bfde2c24afadfd 563 SUPERFAMILY SSF52402 212 487 5.42E-73 T 14-10-2018 XF_0118 3eaf7c8c6d73254854bfde2c24afadfd 563 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 374 1.7E-106 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 XF_0118 3eaf7c8c6d73254854bfde2c24afadfd 563 PIRSF PIRSF001589 1 371 1.8E-107 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 XF_0118 3eaf7c8c6d73254854bfde2c24afadfd 563 PIRSF PIRSF001589 366 523 4.4E-28 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 XF_0118 3eaf7c8c6d73254854bfde2c24afadfd 563 SUPERFAMILY SSF56235 1 199 8.06E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XF_0118 3eaf7c8c6d73254854bfde2c24afadfd 563 Gene3D G3DSA:3.40.50.620 197 522 1.2E-105 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0118 3eaf7c8c6d73254854bfde2c24afadfd 563 Pfam PF00733 Asparagine synthase 214 370 1.5E-55 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 XF_0980 0dbada4d5e19f53158ad9078da980607 162 SUPERFAMILY SSF52374 6 160 9.38E-43 T 14-10-2018 XF_0980 0dbada4d5e19f53158ad9078da980607 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 162 32.756 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XF_0980 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 2.6E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XF_0980 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 2.6E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XF_0980 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 2.6E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XF_0980 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 2.6E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XF_0980 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 2.6E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XF_0980 0dbada4d5e19f53158ad9078da980607 162 Gene3D G3DSA:3.40.50.620 1 162 9.3E-54 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_0980 0dbada4d5e19f53158ad9078da980607 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 67 9.9E-16 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XF_0980 0dbada4d5e19f53158ad9078da980607 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 8 161 3.9E-55 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XF_0980 0dbada4d5e19f53158ad9078da980607 162 Pfam PF01467 Cytidylyltransferase-like 10 138 1.0E-21 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XF_0316 4df1c7148f6c71efb3a6741e1a8b4da8 713 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 708 3.2E-230 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0316 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 88 113 2.0E-45 T 14-10-2018 XF_0316 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 253 274 2.0E-45 T 14-10-2018 XF_0316 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 452 471 2.0E-45 T 14-10-2018 XF_0316 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 275 301 2.0E-45 T 14-10-2018 XF_0316 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 343 355 2.0E-45 T 14-10-2018 XF_0316 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 511 532 1.7E-10 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XF_0316 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 386 408 1.7E-10 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XF_0316 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 90 110 1.7E-10 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XF_0316 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 64 88 1.7E-10 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XF_0316 4df1c7148f6c71efb3a6741e1a8b4da8 713 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 127 4.7E-25 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_0316 4df1c7148f6c71efb3a6741e1a8b4da8 713 Pfam PF00361 Proton-conducting membrane transporter 139 434 7.3E-86 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_1724 46844ea42f6b2641a11681a6f102ac52 329 Pfam PF00248 Aldo/keto reductase family 15 316 1.7E-76 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain XF_1724 46844ea42f6b2641a11681a6f102ac52 329 Gene3D G3DSA:3.20.20.100 1 325 7.9E-113 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XF_1724 46844ea42f6b2641a11681a6f102ac52 329 SUPERFAMILY SSF51430 1 318 6.15E-99 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XF_a0045 faa5586fe9e2245328958db7190b6995 106 PIRSF PIRSF028744 1 106 6.1E-41 T 14-10-2018 IPR014056 Addiction module killer protein, predicted XF_a0045 faa5586fe9e2245328958db7190b6995 106 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 10 102 1.4E-35 T 14-10-2018 IPR014056 Addiction module killer protein, predicted XF_2270 eefe6a22330996ac42812070060fd4e3 288 SUPERFAMILY SSF74650 7 283 4.9E-61 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 XF_2270 eefe6a22330996ac42812070060fd4e3 288 Pfam PF01263 Aldose 1-epimerase 20 283 2.7E-44 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 XF_2270 eefe6a22330996ac42812070060fd4e3 288 Gene3D G3DSA:2.70.98.10 4 287 6.9E-67 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 XF_2270 eefe6a22330996ac42812070060fd4e3 288 PIRSF PIRSF016020 15 287 4.8E-36 T 14-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 XF_1506 197a5992177766223015dc4af721a665 204 SUPERFAMILY SSF52972 4 200 1.54E-70 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XF_1506 197a5992177766223015dc4af721a665 204 Hamap MF_01405 dITP/XTP pyrophosphatase. 7 201 47.44 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 XF_1506 197a5992177766223015dc4af721a665 204 Pfam PF01725 Ham1 family 9 197 9.4E-52 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 XF_1506 197a5992177766223015dc4af721a665 204 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 9 199 4.9E-52 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 XF_1506 197a5992177766223015dc4af721a665 204 Gene3D G3DSA:3.90.950.10 2 202 1.2E-71 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XF_1457 bb7ebd0d7def2a31df8a5a7403884a7c 245 Gene3D G3DSA:3.40.50.720 3 245 9.8E-69 T 14-10-2018 XF_1457 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1457 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1457 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1457 bb7ebd0d7def2a31df8a5a7403884a7c 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 8.8E-50 T 14-10-2018 XF_1457 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.9E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1457 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1457 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.9E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1457 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.9E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1457 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.9E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1457 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.9E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_1457 bb7ebd0d7def2a31df8a5a7403884a7c 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XF_1457 bb7ebd0d7def2a31df8a5a7403884a7c 245 SUPERFAMILY SSF51735 6 244 9.62E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_a0024 10fe6c522a0ee8770f9133af0fcda042 90 Gene3D G3DSA:1.20.5.780 2 82 5.0E-12 T 14-10-2018 XF_a0024 10fe6c522a0ee8770f9133af0fcda042 90 Pfam PF08681 Protein of unknown function (DUF1778) 6 80 8.5E-25 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 XF_a0024 10fe6c522a0ee8770f9133af0fcda042 90 SUPERFAMILY SSF47598 1 79 1.78E-19 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XF_1216 744c0ee93d5162f36838d0b4827459d9 420 Gene3D G3DSA:1.10.287.470 144 253 3.0E-14 T 14-10-2018 XF_1216 744c0ee93d5162f36838d0b4827459d9 420 Gene3D G3DSA:2.40.30.170 300 398 3.0E-14 T 14-10-2018 XF_1216 744c0ee93d5162f36838d0b4827459d9 420 Gene3D G3DSA:2.40.50.100 264 299 3.0E-14 T 14-10-2018 XF_1216 744c0ee93d5162f36838d0b4827459d9 420 Pfam PF13437 HlyD family secretion protein 264 388 1.2E-14 T 14-10-2018 XF_1216 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 332 2.7E-18 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XF_1216 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 79 99 2.7E-18 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XF_1216 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 385 400 2.7E-18 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XF_1216 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 332 355 2.7E-18 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XF_1216 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 400 420 2.7E-18 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XF_1216 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 275 296 2.7E-18 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XF_1462 77a13f53bb652f2368b03437f01ce50e 377 Pfam PF07690 Major Facilitator Superfamily 2 324 5.8E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XF_1462 77a13f53bb652f2368b03437f01ce50e 377 SUPERFAMILY SSF103473 2 371 2.35E-24 T 14-10-2018 IPR036259 MFS transporter superfamily XF_1462 77a13f53bb652f2368b03437f01ce50e 377 Gene3D G3DSA:1.20.1250.20 179 364 4.8E-38 T 14-10-2018 XF_1462 77a13f53bb652f2368b03437f01ce50e 377 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 41 358 5.7E-154 T 14-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 XF_1462 77a13f53bb652f2368b03437f01ce50e 377 Gene3D G3DSA:1.20.1250.20 1 172 1.3E-33 T 14-10-2018 XF_2005 1902882450b7c74eb732170a000c671e 441 Pfam PF07793 Protein of unknown function (DUF1631) 1 435 3.1E-75 T 14-10-2018 IPR012434 Protein of unknown function DUF1631 XF_0258 6abee08b20800a33993b0c696710a0ad 302 Gene3D G3DSA:3.40.50.720 3 284 2.2E-103 T 14-10-2018 XF_0258 6abee08b20800a33993b0c696710a0ad 302 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 296 3.2E-119 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 XF_0258 6abee08b20800a33993b0c696710a0ad 302 SUPERFAMILY SSF51735 2 298 1.02E-92 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0258 6abee08b20800a33993b0c696710a0ad 302 Gene3D G3DSA:3.90.25.10 167 291 2.2E-103 T 14-10-2018 XF_0258 6abee08b20800a33993b0c696710a0ad 302 Pfam PF04321 RmlD substrate binding domain 2 297 2.8E-108 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 XF_0686 af1ba57fd84e6513e00b2c9fdc955975 425 Pfam PF10926 Protein of unknown function (DUF2800) 4 391 2.0E-117 T 14-10-2018 IPR021229 Protein of unknown function DUF2800 XF_1796 aaa330057070856bf5711ebdf655b450 317 Gene3D G3DSA:1.10.10.10 3 59 3.3E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_1796 aaa330057070856bf5711ebdf655b450 317 Gene3D G3DSA:2.30.30.100 270 317 3.3E-9 T 14-10-2018 XF_1796 aaa330057070856bf5711ebdf655b450 317 SUPERFAMILY SSF50037 271 315 5.04E-6 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal XF_1796 aaa330057070856bf5711ebdf655b450 317 Pfam PF08279 HTH domain 14 53 1.3E-5 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 XF_1796 aaa330057070856bf5711ebdf655b450 317 Pfam PF02237 Biotin protein ligase C terminal domain 271 315 5.2E-9 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XF_1796 aaa330057070856bf5711ebdf655b450 317 SUPERFAMILY SSF55681 82 266 4.47E-47 T 14-10-2018 XF_1796 aaa330057070856bf5711ebdf655b450 317 Pfam PF03099 Biotin/lipoate A/B protein ligase family 103 199 4.8E-11 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 XF_1796 aaa330057070856bf5711ebdf655b450 317 Gene3D G3DSA:3.30.930.10 61 268 2.3E-50 T 14-10-2018 XF_1796 aaa330057070856bf5711ebdf655b450 317 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 314 5.5E-46 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XF_2434 2eea3c7449d68c62b2d72095ec911dfc 325 Pfam PF00953 Glycosyl transferase family 4 77 214 2.2E-25 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 XF_2344 93a8cb93645b291590d63b63f581a990 164 Gene3D G3DSA:1.10.10.10 27 110 6.1E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_2344 93a8cb93645b291590d63b63f581a990 164 Gene3D G3DSA:3.30.1490.190 113 164 1.3E-15 T 14-10-2018 XF_2344 93a8cb93645b291590d63b63f581a990 164 SUPERFAMILY SSF46785 32 159 4.73E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XF_2344 93a8cb93645b291590d63b63f581a990 164 Pfam PF01475 Ferric uptake regulator family 37 157 2.3E-41 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 XF_0136 b4524e2363dd7fbef74c3d06ca44d924 141 SUPERFAMILY SSF102400 1 140 1.57E-37 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily XF_0136 b4524e2363dd7fbef74c3d06ca44d924 141 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 136 7.5E-34 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 XF_0136 b4524e2363dd7fbef74c3d06ca44d924 141 Gene3D G3DSA:3.40.50.10110 1 140 7.5E-38 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily XF_2459 13af9c768a3508867cf6fcb27c7edcaa 153 Pfam PF03100 CcmE 4 127 6.4E-38 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 XF_2459 13af9c768a3508867cf6fcb27c7edcaa 153 Gene3D G3DSA:2.40.50.140 28 134 7.2E-33 T 14-10-2018 XF_2459 13af9c768a3508867cf6fcb27c7edcaa 153 SUPERFAMILY SSF82093 28 133 9.68E-34 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 XF_2459 13af9c768a3508867cf6fcb27c7edcaa 153 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 138 27.679 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 XF_2625 75baf3a1101d5c01f7a552c5517438c1 289 Gene3D G3DSA:3.30.2010.10 65 158 5.4E-32 T 14-10-2018 XF_2625 75baf3a1101d5c01f7a552c5517438c1 289 Pfam PF01435 Peptidase family M48 75 285 3.7E-37 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 XF_2625 75baf3a1101d5c01f7a552c5517438c1 289 Hamap MF_00188 Protease HtpX [htpX]. 2 287 24.509 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 XF_0891 6b82a23af179e91d650e622e92f7569f 327 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 70 327 3.2E-142 T 14-10-2018 IPR008487 Protein of unknown function DUF769 XF_1036 12676205353db7c24d4c4390768fefaa 1008 Pfam PF00593 TonB dependent receptor 362 1006 7.3E-15 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XF_1036 12676205353db7c24d4c4390768fefaa 1008 SUPERFAMILY SSF49452 32 106 4.71E-7 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 XF_1036 12676205353db7c24d4c4390768fefaa 1008 SUPERFAMILY SSF56935 115 1008 2.2E-56 T 14-10-2018 XF_2012 abd8f9a46c1b1f239613d26e88dac86c 99 SUPERFAMILY SSF102829 7 95 3.79E-23 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily XF_2012 abd8f9a46c1b1f239613d26e88dac86c 99 Gene3D G3DSA:1.10.20.30 1 48 2.2E-16 T 14-10-2018 XF_2012 abd8f9a46c1b1f239613d26e88dac86c 99 Pfam PF05164 Cell division protein ZapA 7 91 1.7E-18 T 14-10-2018 IPR007838 Cell division protein ZapA-like XF_0878 e9ac0358b7e699443cf2281b5c9ac1c9 257 SUPERFAMILY SSF88713 40 233 9.73E-42 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XF_0878 e9ac0358b7e699443cf2281b5c9ac1c9 257 Pfam PF01522 Polysaccharide deacetylase 75 212 2.7E-32 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XF_0878 e9ac0358b7e699443cf2281b5c9ac1c9 257 Gene3D G3DSA:3.20.20.370 19 246 1.6E-55 T 14-10-2018 XF_1735 28cd48f6f4350852df92cbee312a1c34 357 SUPERFAMILY SSF50952 27 325 3.66E-34 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 XF_1735 28cd48f6f4350852df92cbee312a1c34 357 Pfam PF07995 Glucose / Sorbosone dehydrogenase 50 338 4.9E-60 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase XF_1735 28cd48f6f4350852df92cbee312a1c34 357 Gene3D G3DSA:2.120.10.30 22 356 1.5E-86 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XF_1335 57e83c759f84f990edae38d999f94876 180 SUPERFAMILY SSF52540 5 165 8.6E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1335 57e83c759f84f990edae38d999f94876 180 Gene3D G3DSA:3.40.50.300 4 179 5.1E-52 T 14-10-2018 XF_1335 57e83c759f84f990edae38d999f94876 180 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XF_1335 57e83c759f84f990edae38d999f94876 180 Pfam PF01202 Shikimate kinase 13 166 1.2E-48 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XF_1335 57e83c759f84f990edae38d999f94876 180 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 27.958 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XF_1335 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 98 115 1.7E-21 T 14-10-2018 XF_1335 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 77 86 1.7E-21 T 14-10-2018 XF_1335 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 7 22 1.7E-21 T 14-10-2018 XF_1335 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 59 67 1.7E-21 T 14-10-2018 XF_1335 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 31 44 1.7E-21 T 14-10-2018 XF_1041 d90699a843223813c682aad756ad3d9b 234 Hamap MF_00052_B Ribonuclease HII [rnhB]. 17 198 35.945 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 XF_1041 d90699a843223813c682aad756ad3d9b 234 Pfam PF01351 Ribonuclease HII 19 197 3.1E-35 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain XF_1041 d90699a843223813c682aad756ad3d9b 234 SUPERFAMILY SSF53098 12 219 1.32E-65 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily XF_1041 d90699a843223813c682aad756ad3d9b 234 Gene3D G3DSA:3.30.420.10 2 230 4.3E-73 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XF_1160 5145fc6c6baa8b44d0fba700c72854e9 65 Gene3D G3DSA:1.10.287.310 1 59 2.6E-23 T 14-10-2018 XF_1160 5145fc6c6baa8b44d0fba700c72854e9 65 SUPERFAMILY SSF46561 1 59 2.49E-18 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1160 5145fc6c6baa8b44d0fba700c72854e9 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 59 1.6E-25 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1160 5145fc6c6baa8b44d0fba700c72854e9 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.381 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1160 5145fc6c6baa8b44d0fba700c72854e9 65 Pfam PF00831 Ribosomal L29 protein 5 58 2.1E-21 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1160 5145fc6c6baa8b44d0fba700c72854e9 65 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1713 26b2c4a1012ca7357a47e6578a734331 111 Gene3D G3DSA:3.90.1280.10 55 110 8.8E-20 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 XF_1713 26b2c4a1012ca7357a47e6578a734331 111 SUPERFAMILY SSF64397 1 61 2.88E-14 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 XF_1713 26b2c4a1012ca7357a47e6578a734331 111 SUPERFAMILY SSF118352 55 110 4.97E-18 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 XF_1713 26b2c4a1012ca7357a47e6578a734331 111 Gene3D G3DSA:1.10.287.480 6 54 3.7E-11 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily XF_1713 26b2c4a1012ca7357a47e6578a734331 111 Pfam PF01430 Hsp33 protein 1 102 2.0E-28 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 XF_2257 63c967a060421e0bec30747c3b3279bd 230 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 37 225 24.633 T 14-10-2018 IPR022929 Putative manganese efflux pump MntP XF_2257 63c967a060421e0bec30747c3b3279bd 230 Pfam PF02659 Putative manganese efflux pump 67 222 5.5E-50 T 14-10-2018 IPR003810 Putative manganese efflux pump XF_0630 faabfc39d2030cd79ad5a1ac8d1187dd 158 Pfam PF10083 Uncharacterized protein conserved in bacteria (DUF2321) 3 158 3.6E-65 T 14-10-2018 IPR016891 Protein of unknown function DUF2321 XF_0630 faabfc39d2030cd79ad5a1ac8d1187dd 158 PIRSF PIRSF028570 1 158 8.6E-70 T 14-10-2018 IPR016891 Protein of unknown function DUF2321 XF_a0013 858380421b6f4abb6fe30178e721d51a 278 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 6 253 5.4E-79 T 14-10-2018 IPR014148 P-type conjugative transfer protein VirB9 XF_a0013 858380421b6f4abb6fe30178e721d51a 278 Pfam PF03524 Conjugal transfer protein 29 251 1.9E-62 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX XF_a0013 858380421b6f4abb6fe30178e721d51a 278 Gene3D G3DSA:2.60.40.2500 150 278 1.4E-36 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily XF_0881 20ef54209db65174b0d3ac2c988d77b3 202 SUPERFAMILY SSF55166 73 199 1.02E-25 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 XF_0881 20ef54209db65174b0d3ac2c988d77b3 202 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 77 201 1.4E-39 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 XF_0881 20ef54209db65174b0d3ac2c988d77b3 202 Gene3D G3DSA:3.30.1380.10 47 202 1.9E-37 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 XF_1778 f457a7dff8aa4c8a2d1f515b6135a2eb 150 SUPERFAMILY SSF50249 3 138 2.78E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_1778 f457a7dff8aa4c8a2d1f515b6135a2eb 150 Gene3D G3DSA:2.40.50.140 3 149 5.5E-22 T 14-10-2018 XF_1778 f457a7dff8aa4c8a2d1f515b6135a2eb 150 PIRSF PIRSF002070 1 149 1.2E-23 T 14-10-2018 XF_1778 f457a7dff8aa4c8a2d1f515b6135a2eb 150 Pfam PF00436 Single-strand binding protein family 9 109 1.2E-11 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XF_1168 93b43cf9e4ffb2df7915d6d020c89528 110 Gene3D G3DSA:3.30.420.100 1 110 1.1E-35 T 14-10-2018 XF_1168 93b43cf9e4ffb2df7915d6d020c89528 110 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 110 22.418 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1168 93b43cf9e4ffb2df7915d6d020c89528 110 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 2 110 2.6E-32 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_1168 93b43cf9e4ffb2df7915d6d020c89528 110 SUPERFAMILY SSF53137 1 108 1.61E-42 T 14-10-2018 XF_1168 93b43cf9e4ffb2df7915d6d020c89528 110 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 2 110 1.1E-33 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0012 194ffe017311155eead1e9a8c7fff051 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 134 1.3E-24 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 XF_0012 194ffe017311155eead1e9a8c7fff051 136 Gene3D G3DSA:3.30.420.270 63 134 7.4E-6 T 14-10-2018 XF_0592 e89a772a6762c46e843e27173afaffff 368 Pfam PF01636 Phosphotransferase enzyme family 58 278 8.6E-28 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase XF_0592 e89a772a6762c46e843e27173afaffff 368 SUPERFAMILY SSF56112 45 337 3.5E-44 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily XF_0592 e89a772a6762c46e843e27173afaffff 368 Gene3D G3DSA:3.90.1200.10 127 365 4.0E-62 T 14-10-2018 XF_0592 e89a772a6762c46e843e27173afaffff 368 Gene3D G3DSA:3.30.200.20 35 126 9.9E-18 T 14-10-2018 XF_1840 2707f490f0e194dc0a4a00caf60dab96 237 SMART SM00867 63 227 2.3E-65 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XF_1840 2707f490f0e194dc0a4a00caf60dab96 237 Gene3D G3DSA:2.40.128.110 61 228 3.1E-50 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XF_1840 2707f490f0e194dc0a4a00caf60dab96 237 SUPERFAMILY SSF101874 61 226 4.19E-51 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XF_1840 2707f490f0e194dc0a4a00caf60dab96 237 Pfam PF04264 YceI-like domain 64 226 8.1E-41 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XF_0540 30a5f01edbcea2c7dabdfcf3966c086a 126 SUPERFAMILY SSF53955 4 113 4.04E-21 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_0540 30a5f01edbcea2c7dabdfcf3966c086a 126 Gene3D G3DSA:3.30.910.40 32 106 4.7E-10 T 14-10-2018 XF_2554 214b704715d617b1cd5cd94bfd72ad2a 229 Pfam PF11218 Protein of unknown function (DUF3011) 32 226 1.8E-90 T 14-10-2018 IPR021381 Protein of unknown function DUF3011 XF_0463 ae21b93ad0fa1168890a127994cbad18 218 SUPERFAMILY SSF48452 102 193 4.51E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_0463 ae21b93ad0fa1168890a127994cbad18 218 Gene3D G3DSA:1.25.40.10 46 202 6.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XF_0463 ae21b93ad0fa1168890a127994cbad18 218 Pfam PF09976 Tetratricopeptide repeat-like domain 23 208 1.2E-29 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 XF_0730 1b4bfb63ab8559f84be47da5075d0417 739 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 117 480 5.0E-66 T 14-10-2018 IPR010090 Phage tail tape measure protein XF_0730 1b4bfb63ab8559f84be47da5075d0417 739 Pfam PF10145 Phage-related minor tail protein 162 373 4.1E-33 T 14-10-2018 IPR010090 Phage tail tape measure protein XF_0508 70719a8d65ac1cce63289a04106dc165 699 Gene3D G3DSA:3.40.50.300 3 224 3.2E-6 T 14-10-2018 XF_0508 70719a8d65ac1cce63289a04106dc165 699 Pfam PF05876 Phage terminase large subunit (GpA) 47 634 2.1E-168 T 14-10-2018 IPR008866 Bacteriophage lambda, GpA XF_2031 eb49add53b774b6be6f2997b4fb7aa5c 83 SUPERFAMILY SSF47598 2 30 6.52E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XF_2031 eb49add53b774b6be6f2997b4fb7aa5c 83 Pfam PF09386 Antitoxin ParD 1 78 4.6E-39 T 14-10-2018 IPR022789 Antitoxin ParD XF_2031 eb49add53b774b6be6f2997b4fb7aa5c 83 Gene3D G3DSA:1.10.1220.50 1 83 2.6E-37 T 14-10-2018 XF_1460 9bd9537cb243d7d7dd75ce3c2f2fe87a 339 SUPERFAMILY SSF53067 20 334 1.59E-49 T 14-10-2018 XF_1460 9bd9537cb243d7d7dd75ce3c2f2fe87a 339 Gene3D G3DSA:3.30.420.40 21 330 1.7E-89 T 14-10-2018 XF_1460 9bd9537cb243d7d7dd75ce3c2f2fe87a 339 Pfam PF02685 Glucokinase 22 334 1.9E-101 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XF_1460 9bd9537cb243d7d7dd75ce3c2f2fe87a 339 Gene3D G3DSA:3.40.367.20 120 319 1.7E-89 T 14-10-2018 XF_1346 8e14b3ad2570f0ae6eee889fa82dd772 319 SUPERFAMILY SSF161098 36 303 2.24E-49 T 14-10-2018 IPR035906 MetI-like superfamily XF_1346 8e14b3ad2570f0ae6eee889fa82dd772 319 Gene3D G3DSA:1.10.3720.10 37 309 1.0E-56 T 14-10-2018 IPR035906 MetI-like superfamily XF_1346 8e14b3ad2570f0ae6eee889fa82dd772 319 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 36 308 2.0E-84 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 XF_1346 8e14b3ad2570f0ae6eee889fa82dd772 319 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 37 310 3.6E-126 T 14-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 XF_1346 8e14b3ad2570f0ae6eee889fa82dd772 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 308 5.1E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XF_1297 46345b2dbe4784ca0b898744943a3f79 338 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 67 326 3.6E-44 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region XF_1297 46345b2dbe4784ca0b898744943a3f79 338 Gene3D G3DSA:2.120.10.30 24 334 1.6E-93 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XF_1297 46345b2dbe4784ca0b898744943a3f79 338 SUPERFAMILY SSF63829 37 337 1.77E-57 T 14-10-2018 XF_0278 bcaabbe94c2757858405f60a46724593 219 Gene3D G3DSA:1.10.510.10 48 187 1.1E-6 T 14-10-2018 XF_0278 bcaabbe94c2757858405f60a46724593 219 Pfam PF01636 Phosphotransferase enzyme family 100 155 2.5E-5 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase XF_0278 bcaabbe94c2757858405f60a46724593 219 SUPERFAMILY SSF56112 31 149 1.61E-16 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily XF_0621 2c5686499899bfae7dde17fc2238e7ed 274 Gene3D G3DSA:3.40.1190.20 2 272 2.1E-91 T 14-10-2018 IPR029056 Ribokinase-like XF_0621 2c5686499899bfae7dde17fc2238e7ed 274 Pfam PF08543 Phosphomethylpyrimidine kinase 21 263 5.8E-87 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 XF_0621 2c5686499899bfae7dde17fc2238e7ed 274 SUPERFAMILY SSF53613 14 266 1.4E-72 T 14-10-2018 IPR029056 Ribokinase-like XF_0621 2c5686499899bfae7dde17fc2238e7ed 274 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 14 264 1.9E-87 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XF_0367 f8a41926206824cc1703e37dc3a3e74e 387 Pfam PF00248 Aldo/keto reductase family 82 373 1.6E-67 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain XF_0367 f8a41926206824cc1703e37dc3a3e74e 387 Gene3D G3DSA:3.20.20.100 66 387 1.8E-107 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XF_0367 f8a41926206824cc1703e37dc3a3e74e 387 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 179 189 5.6E-11 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XF_0367 f8a41926206824cc1703e37dc3a3e74e 387 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 340 353 5.6E-11 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XF_0367 f8a41926206824cc1703e37dc3a3e74e 387 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 302 314 5.6E-11 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XF_0367 f8a41926206824cc1703e37dc3a3e74e 387 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 230 249 5.6E-11 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XF_0367 f8a41926206824cc1703e37dc3a3e74e 387 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 327 339 5.6E-11 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XF_0367 f8a41926206824cc1703e37dc3a3e74e 387 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 274 280 5.6E-11 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XF_0367 f8a41926206824cc1703e37dc3a3e74e 387 SUPERFAMILY SSF51430 67 385 5.76E-90 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XF_1055 ea910e686ace23fbcc3f1ff4e303a5f7 106 PIRSF PIRSF028538 1 106 1.4E-45 T 14-10-2018 IPR014949 Protein of unknown function DUF1820 XF_1055 ea910e686ace23fbcc3f1ff4e303a5f7 106 Pfam PF08850 Domain of unknown function (DUF1820) 5 99 6.6E-38 T 14-10-2018 IPR014949 Protein of unknown function DUF1820 XF_a0008 04940af9703691914c29b4829a2490fa 226 TIGRFAM TIGR02791 VirB5: P-type DNA transfer protein VirB5 4 212 5.1E-86 T 14-10-2018 IPR014158 Type IV secretion system, VirB5 XF_a0008 04940af9703691914c29b4829a2490fa 226 Pfam PF07996 Type IV secretion system proteins 26 210 1.2E-50 T 14-10-2018 IPR014158 Type IV secretion system, VirB5 XF_a0008 04940af9703691914c29b4829a2490fa 226 Gene3D G3DSA:1.20.58.430 26 212 6.0E-52 T 14-10-2018 IPR023220 Type IV secretion system, VirB5-domain XF_a0008 04940af9703691914c29b4829a2490fa 226 SUPERFAMILY SSF101082 26 212 5.23E-43 T 14-10-2018 XF_0759 f71c9d6febb48f8e292c5c04772bd6f1 539 SMART SM00646 351 506 8.4E-68 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 XF_0759 f71c9d6febb48f8e292c5c04772bd6f1 539 Pfam PF11741 AMIN domain 41 121 2.4E-12 T 14-10-2018 IPR021731 AMIN domain XF_0759 f71c9d6febb48f8e292c5c04772bd6f1 539 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 291 506 2.0E-47 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 XF_0759 f71c9d6febb48f8e292c5c04772bd6f1 539 Gene3D G3DSA:2.60.40.3500 32 137 1.9E-16 T 14-10-2018 XF_0759 f71c9d6febb48f8e292c5c04772bd6f1 539 SUPERFAMILY SSF53187 289 509 4.39E-52 T 14-10-2018 XF_0759 f71c9d6febb48f8e292c5c04772bd6f1 539 Gene3D G3DSA:3.40.630.40 278 514 1.1E-74 T 14-10-2018 XF_2170 ab561f63dc1d50c7bd4960a71f8de393 204 Pfam PF01161 Phosphatidylethanolamine-binding protein 27 196 3.3E-34 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein XF_2170 ab561f63dc1d50c7bd4960a71f8de393 204 SUPERFAMILY SSF49777 1 199 3.92E-39 T 14-10-2018 IPR036610 PEBP-like superfamily XF_2170 ab561f63dc1d50c7bd4960a71f8de393 204 Gene3D G3DSA:3.90.280.10 1 198 3.1E-44 T 14-10-2018 IPR036610 PEBP-like superfamily XF_2170 ab561f63dc1d50c7bd4960a71f8de393 204 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 28 196 7.5E-23 T 14-10-2018 IPR005247 YbhB/YbcL XF_1478 fa2305677eed4e8b5e9ec8e706d96ced 139 Gene3D G3DSA:2.170.270.10 1 139 2.0E-37 T 14-10-2018 XF_1478 fa2305677eed4e8b5e9ec8e706d96ced 139 SMART SM00317 1 112 6.0E-19 T 14-10-2018 IPR001214 SET domain GO:0005515 XF_1478 fa2305677eed4e8b5e9ec8e706d96ced 139 SUPERFAMILY SSF82199 1 134 1.44E-35 T 14-10-2018 XF_1478 fa2305677eed4e8b5e9ec8e706d96ced 139 Pfam PF00856 SET domain 33 106 1.1E-16 T 14-10-2018 IPR001214 SET domain GO:0005515 XF_0935 451e2c60bbed501bc8080d8328b86aa6 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 44 60 1.1E-10 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XF_0935 451e2c60bbed501bc8080d8328b86aa6 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 85 98 1.1E-10 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XF_0935 451e2c60bbed501bc8080d8328b86aa6 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 65 79 1.1E-10 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XF_0935 451e2c60bbed501bc8080d8328b86aa6 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 215 227 1.1E-10 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XF_0935 451e2c60bbed501bc8080d8328b86aa6 311 Gene3D G3DSA:3.40.50.150 43 273 1.1E-37 T 14-10-2018 XF_0935 451e2c60bbed501bc8080d8328b86aa6 311 PIRSF PIRSF000398 23 307 1.0E-69 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 XF_0935 451e2c60bbed501bc8080d8328b86aa6 311 SUPERFAMILY SSF53335 42 303 9.35E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0935 451e2c60bbed501bc8080d8328b86aa6 311 Gene3D G3DSA:1.10.1020.10 92 194 1.1E-37 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 XF_0935 451e2c60bbed501bc8080d8328b86aa6 311 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 44 274 1.2E-20 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XF_1038 e58a57d9dad6bbfc1cfe37b39fe4d4d0 503 Gene3D G3DSA:3.40.50.12780 75 368 1.7E-22 T 14-10-2018 XF_1038 e58a57d9dad6bbfc1cfe37b39fe4d4d0 503 Gene3D G3DSA:3.30.300.30 401 501 6.3E-12 T 14-10-2018 XF_1038 e58a57d9dad6bbfc1cfe37b39fe4d4d0 503 Pfam PF00501 AMP-binding enzyme 182 346 8.5E-16 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XF_1038 e58a57d9dad6bbfc1cfe37b39fe4d4d0 503 SUPERFAMILY SSF56801 76 501 5.49E-47 T 14-10-2018 XF_1715 efa87f8b9a220c96607fdf7e616898af 273 Gene3D G3DSA:1.10.3810.10 92 265 4.4E-45 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_1715 efa87f8b9a220c96607fdf7e616898af 273 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 48 264 2.0E-79 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_1715 efa87f8b9a220c96607fdf7e616898af 273 Pfam PF00912 Transglycosylase 99 256 9.1E-43 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_1715 efa87f8b9a220c96607fdf7e616898af 273 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 46 267 40.66 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_1715 efa87f8b9a220c96607fdf7e616898af 273 SUPERFAMILY SSF53955 92 265 1.1E-53 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_1870 7612f8dd1813201d55247686a08ff110 356 Gene3D G3DSA:3.40.50.300 1 188 4.6E-45 T 14-10-2018 XF_1870 7612f8dd1813201d55247686a08ff110 356 Pfam PF05707 Zonular occludens toxin (Zot) 1 187 1.4E-54 T 14-10-2018 IPR008900 Zona occludens toxin XF_a0031 eec128479a647049ae8aa242b7555024 339 Gene3D G3DSA:2.40.10.10 129 231 1.6E-13 T 14-10-2018 XF_a0031 eec128479a647049ae8aa242b7555024 339 Gene3D G3DSA:2.40.10.10 232 336 3.9E-10 T 14-10-2018 XF_a0031 eec128479a647049ae8aa242b7555024 339 SUPERFAMILY SSF50494 120 332 8.27E-14 T 14-10-2018 IPR009003 Peptidase S1, PA clan XF_a0014 05ccc854a059a83827e57349c97054c3 447 Pfam PF03743 Bacterial conjugation TrbI-like protein 262 437 4.1E-52 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI XF_a0014 05ccc854a059a83827e57349c97054c3 447 Gene3D G3DSA:2.40.128.260 383 446 5.4E-9 T 14-10-2018 XF_a0014 05ccc854a059a83827e57349c97054c3 447 Gene3D G3DSA:2.40.128.260 255 382 1.6E-44 T 14-10-2018 XF_1990 1fcecafaff4d42a5e93fa8738cc4eca1 211 Pfam PF00578 AhpC/TSA family 78 188 1.2E-13 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XF_1990 1fcecafaff4d42a5e93fa8738cc4eca1 211 Gene3D G3DSA:3.40.30.10 48 205 1.2E-30 T 14-10-2018 XF_1990 1fcecafaff4d42a5e93fa8738cc4eca1 211 ProSitePatterns PS00194 Thioredoxin family active site. 101 119 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XF_1990 1fcecafaff4d42a5e93fa8738cc4eca1 211 SUPERFAMILY SSF52833 78 206 3.9E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_1209 93298e1136b1032ac6f7a596868f550b 467 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 464 4.0E-101 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 XF_1209 93298e1136b1032ac6f7a596868f550b 467 SUPERFAMILY SSF56024 100 296 6.28E-45 T 14-10-2018 XF_1209 93298e1136b1032ac6f7a596868f550b 467 Gene3D G3DSA:3.30.870.10 298 439 1.2E-21 T 14-10-2018 XF_1209 93298e1136b1032ac6f7a596868f550b 467 SUPERFAMILY SSF56024 258 454 1.48E-43 T 14-10-2018 XF_1209 93298e1136b1032ac6f7a596868f550b 467 SMART SM00155 209 236 0.0042 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XF_1209 93298e1136b1032ac6f7a596868f550b 467 SMART SM00155 380 407 0.47 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XF_1209 93298e1136b1032ac6f7a596868f550b 467 Pfam PF13091 PLD-like domain 125 266 5.0E-17 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XF_1209 93298e1136b1032ac6f7a596868f550b 467 Pfam PF13091 PLD-like domain 310 429 7.8E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XF_1209 93298e1136b1032ac6f7a596868f550b 467 Gene3D G3DSA:3.30.870.10 107 297 4.4E-32 T 14-10-2018 XF_0976 ac8cd55f2c4ce9c5bb4fa6fcb54c1a03 490 Gene3D G3DSA:1.10.3860.10 55 470 3.8E-113 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XF_0976 ac8cd55f2c4ce9c5bb4fa6fcb54c1a03 490 PRINTS PR00173 Glutamate-aspartate symporter signature 58 78 3.6E-35 T 14-10-2018 XF_0976 ac8cd55f2c4ce9c5bb4fa6fcb54c1a03 490 PRINTS PR00173 Glutamate-aspartate symporter signature 99 119 3.6E-35 T 14-10-2018 XF_0976 ac8cd55f2c4ce9c5bb4fa6fcb54c1a03 490 PRINTS PR00173 Glutamate-aspartate symporter signature 200 222 3.6E-35 T 14-10-2018 XF_0976 ac8cd55f2c4ce9c5bb4fa6fcb54c1a03 490 PRINTS PR00173 Glutamate-aspartate symporter signature 382 401 3.6E-35 T 14-10-2018 XF_0976 ac8cd55f2c4ce9c5bb4fa6fcb54c1a03 490 PRINTS PR00173 Glutamate-aspartate symporter signature 247 266 3.6E-35 T 14-10-2018 XF_0976 ac8cd55f2c4ce9c5bb4fa6fcb54c1a03 490 PRINTS PR00173 Glutamate-aspartate symporter signature 129 154 3.6E-35 T 14-10-2018 XF_0976 ac8cd55f2c4ce9c5bb4fa6fcb54c1a03 490 PRINTS PR00173 Glutamate-aspartate symporter signature 273 292 3.6E-35 T 14-10-2018 XF_0976 ac8cd55f2c4ce9c5bb4fa6fcb54c1a03 490 PRINTS PR00173 Glutamate-aspartate symporter signature 347 373 3.6E-35 T 14-10-2018 XF_0976 ac8cd55f2c4ce9c5bb4fa6fcb54c1a03 490 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 350 373 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site XF_0976 ac8cd55f2c4ce9c5bb4fa6fcb54c1a03 490 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 57 483 37.679 T 14-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 XF_0976 ac8cd55f2c4ce9c5bb4fa6fcb54c1a03 490 SUPERFAMILY SSF118215 64 457 3.14E-111 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XF_0976 ac8cd55f2c4ce9c5bb4fa6fcb54c1a03 490 Pfam PF00375 Sodium:dicarboxylate symporter family 64 456 5.3E-100 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 XF_0976 ac8cd55f2c4ce9c5bb4fa6fcb54c1a03 490 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 91 106 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site XF_1018 933331c6ad014d403fa2f3411cc82e0b 254 PIRSF PIRSF037208 2 254 2.2E-90 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 XF_1018 933331c6ad014d403fa2f3411cc82e0b 254 SUPERFAMILY SSF55729 84 243 1.09E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase XF_1018 933331c6ad014d403fa2f3411cc82e0b 254 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 9 242 37.495 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 XF_1018 933331c6ad014d403fa2f3411cc82e0b 254 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 109 236 4.1E-32 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 XF_1018 933331c6ad014d403fa2f3411cc82e0b 254 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 19 89 3.9E-17 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 XF_1815 a1504beffea3e8ddfca0acfadbe3ee1c 185 Pfam PF02620 Uncharacterized ACR, COG1399 78 183 4.4E-10 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD XF_0948 32a524665a105476bd991537403af3a9 181 Pfam PF03477 ATP cone domain 50 136 9.3E-12 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 XF_0948 32a524665a105476bd991537403af3a9 181 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.5E-55 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 XF_0948 32a524665a105476bd991537403af3a9 181 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 156 78.609 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 XF_1552 885eeece8aaa8e053ca91169fde1c155 422 Pfam PF08007 Cupin superfamily protein 25 337 1.4E-103 T 14-10-2018 IPR003347 JmjC domain XF_1552 885eeece8aaa8e053ca91169fde1c155 422 SMART SM00558 111 249 4.8E-4 T 14-10-2018 IPR003347 JmjC domain XF_1552 885eeece8aaa8e053ca91169fde1c155 422 Gene3D G3DSA:2.60.120.650 11 229 1.5E-80 T 14-10-2018 XF_1552 885eeece8aaa8e053ca91169fde1c155 422 Gene3D G3DSA:1.10.10.2510 230 403 6.5E-33 T 14-10-2018 XF_1552 885eeece8aaa8e053ca91169fde1c155 422 SUPERFAMILY SSF51197 22 313 1.24E-63 T 14-10-2018 XF_0127 a8371921430c0a38318ee7d49e904e25 674 SUPERFAMILY SSF55486 1 671 9.04E-179 T 14-10-2018 XF_0127 a8371921430c0a38318ee7d49e904e25 674 Pfam PF01432 Peptidase family M3 224 671 2.7E-136 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 XF_0127 a8371921430c0a38318ee7d49e904e25 674 Gene3D G3DSA:1.10.1370.10 139 604 4.4E-238 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 XF_0127 a8371921430c0a38318ee7d49e904e25 674 Gene3D G3DSA:1.10.1370.40 13 669 4.4E-238 T 14-10-2018 XF_2191 1a18213a28ac964f47cce214420634d1 50 SUPERFAMILY SSF160472 3 50 1.44E-5 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_1210 6a45561d39bd65d599171aacf1ffab84 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 70 9.5E-10 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 XF_1210 6a45561d39bd65d599171aacf1ffab84 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 124 193 6.6E-9 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal XF_1210 6a45561d39bd65d599171aacf1ffab84 205 Gene3D G3DSA:3.40.30.10 2 201 2.6E-77 T 14-10-2018 XF_1210 6a45561d39bd65d599171aacf1ffab84 205 Gene3D G3DSA:1.20.1050.10 80 192 2.6E-77 T 14-10-2018 XF_1210 6a45561d39bd65d599171aacf1ffab84 205 SUPERFAMILY SSF52833 1 76 1.05E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_1210 6a45561d39bd65d599171aacf1ffab84 205 SUPERFAMILY SSF47616 82 203 3.69E-24 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XF_0589 1b57d86b361e61229e56d9f6d822b60c 385 Pfam PF01594 AI-2E family transporter 25 348 3.0E-53 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like XF_1875 2d2fb558b90956a8b8c14c059a306625 359 Pfam PF05707 Zonular occludens toxin (Zot) 1 187 5.1E-55 T 14-10-2018 IPR008900 Zona occludens toxin XF_1875 2d2fb558b90956a8b8c14c059a306625 359 Gene3D G3DSA:3.40.50.300 1 188 1.3E-45 T 14-10-2018 XF_0641 a70393d465e974c15dd138990a1f6193 380 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 72 77 - T 14-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 XF_0641 a70393d465e974c15dd138990a1f6193 380 Pfam PF01555 DNA methylase 68 374 1.9E-44 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XF_0641 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 104 124 6.8E-27 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XF_0641 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 334 352 6.8E-27 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XF_0641 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 67 81 6.8E-27 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XF_0641 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 357 377 6.8E-27 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XF_0641 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 315 332 6.8E-27 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XF_0641 a70393d465e974c15dd138990a1f6193 380 SUPERFAMILY SSF53335 49 375 1.62E-58 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0078 6b891a3165bdb3447ec803f72f7dd3bd 354 Gene3D G3DSA:2.60.40.1090 207 354 3.4E-32 T 14-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XF_0078 6b891a3165bdb3447ec803f72f7dd3bd 354 SUPERFAMILY SSF49401 202 354 1.04E-26 T 14-10-2018 IPR008966 Adhesion domain superfamily XF_0078 6b891a3165bdb3447ec803f72f7dd3bd 354 Pfam PF00419 Fimbrial protein 201 354 1.0E-19 T 14-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 XF_0078 6b891a3165bdb3447ec803f72f7dd3bd 354 Gene3D G3DSA:2.60.40.3310 37 206 1.0E-40 T 14-10-2018 XF_2291 f3666fdd3b230f25c3b8c8e1c3e31706 252 SUPERFAMILY SSF56672 1 250 8.56E-27 T 14-10-2018 XF_0277 49f71a301cda8646e5b27b17e3ad2ba1 709 Pfam PF09335 SNARE associated Golgi protein 65 188 1.6E-17 T 14-10-2018 IPR032816 SNARE associated Golgi protein XF_0277 49f71a301cda8646e5b27b17e3ad2ba1 709 Gene3D G3DSA:1.20.144.10 370 473 3.6E-16 T 14-10-2018 XF_0277 49f71a301cda8646e5b27b17e3ad2ba1 709 Pfam PF14067 LssY C-terminus 521 644 2.4E-12 T 14-10-2018 IPR025902 LssY-like C-terminal domain XF_0277 49f71a301cda8646e5b27b17e3ad2ba1 709 Pfam PF01569 PAP2 superfamily 381 460 3.1E-11 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XF_0277 49f71a301cda8646e5b27b17e3ad2ba1 709 SUPERFAMILY SSF48317 271 467 1.57E-22 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XF_1782 ef1abc845d8fc1438467b42edf4168e7 186 Pfam PF11198 Protein of unknown function (DUF2857) 8 182 2.3E-62 T 14-10-2018 IPR021364 Protein of unknown function DUF2857 XF_2642 21276a165078d0a8a3c2394c4110fdf2 192 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 189 3.1E-56 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 XF_2642 21276a165078d0a8a3c2394c4110fdf2 192 Gene3D G3DSA:3.40.50.1470 2 192 1.1E-59 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 XF_2642 21276a165078d0a8a3c2394c4110fdf2 192 SUPERFAMILY SSF53178 5 189 1.57E-64 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 XF_2642 21276a165078d0a8a3c2394c4110fdf2 192 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 XF_2642 21276a165078d0a8a3c2394c4110fdf2 192 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 33.995 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 XF_2642 21276a165078d0a8a3c2394c4110fdf2 192 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 4.0E-50 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 XF_0518 be4e79318e82b0213a3a7de95e5083ca 249 PIRSF PIRSF028589 1 249 1.3E-115 T 14-10-2018 IPR016893 Protein of unknown function UCP028589 XF_1630 afb3b3c1566f9d3d35329bea8e0325ac 349 Pfam PF13280 WYL domain 158 323 1.5E-31 T 14-10-2018 IPR026881 WYL domain XF_1264 13a86857d2fcb64597f7b8ab627a8295 282 SMART SM00869 22 248 7.2E-8 T 14-10-2018 IPR005546 Autotransporter beta-domain XF_1264 13a86857d2fcb64597f7b8ab627a8295 282 SUPERFAMILY SSF103515 4 264 3.4E-26 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily XF_1264 13a86857d2fcb64597f7b8ab627a8295 282 Gene3D G3DSA:2.40.128.130 4 282 2.8E-17 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily XF_1264 13a86857d2fcb64597f7b8ab627a8295 282 Pfam PF03797 Autotransporter beta-domain 78 260 4.0E-15 T 14-10-2018 IPR005546 Autotransporter beta-domain XF_1765 0d0dd9f59bab17719323a822905a36b8 472 Gene3D G3DSA:1.20.1720.10 28 274 6.6E-44 T 14-10-2018 XF_1765 0d0dd9f59bab17719323a822905a36b8 472 Gene3D G3DSA:1.20.1250.20 275 464 2.3E-23 T 14-10-2018 XF_1765 0d0dd9f59bab17719323a822905a36b8 472 SUPERFAMILY SSF103473 14 461 3.92E-65 T 14-10-2018 IPR036259 MFS transporter superfamily XF_1765 0d0dd9f59bab17719323a822905a36b8 472 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 28 431 3.3E-71 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 XF_1765 0d0dd9f59bab17719323a822905a36b8 472 Pfam PF07690 Major Facilitator Superfamily 32 421 4.3E-57 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XF_2646 bbe01f07bf28b1e965f84fb415cd6e7c 216 Gene3D G3DSA:2.50.20.10 41 212 7.5E-35 T 14-10-2018 XF_2646 bbe01f07bf28b1e965f84fb415cd6e7c 216 Pfam PF03550 Outer membrane lipoprotein LolB 60 211 4.0E-34 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 XF_2646 bbe01f07bf28b1e965f84fb415cd6e7c 216 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 10 213 22.648 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 XF_2646 bbe01f07bf28b1e965f84fb415cd6e7c 216 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 17 211 7.3E-18 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 XF_2646 bbe01f07bf28b1e965f84fb415cd6e7c 216 SUPERFAMILY SSF89392 42 212 3.41E-37 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX XF_2730 ded2ae265de84bde4edfd94f23599f61 213 Pfam PF01810 LysE type translocator 27 207 4.7E-34 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XF_2730 ded2ae265de84bde4edfd94f23599f61 213 PIRSF PIRSF006324 13 212 8.2E-44 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XF_0416 928d07250fc94bf5eb2f586350830d24 351 PRINTS PR01805 VacJ lipoprotein signature 117 130 1.3E-22 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XF_0416 928d07250fc94bf5eb2f586350830d24 351 PRINTS PR01805 VacJ lipoprotein signature 185 202 1.3E-22 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XF_0416 928d07250fc94bf5eb2f586350830d24 351 PRINTS PR01805 VacJ lipoprotein signature 134 150 1.3E-22 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XF_0416 928d07250fc94bf5eb2f586350830d24 351 PRINTS PR01805 VacJ lipoprotein signature 221 238 1.3E-22 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XF_0416 928d07250fc94bf5eb2f586350830d24 351 Pfam PF04333 MlaA lipoprotein 116 307 7.1E-67 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XF_1786 dd40ad4b4f5a147b9876995d54146a70 73 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 15 65 4.0E-25 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA XF_0034 88a756aaaad7eb18bfa8e2d7ec4f4048 244 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 12 236 32.449 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_0034 88a756aaaad7eb18bfa8e2d7ec4f4048 244 Gene3D G3DSA:3.20.20.70 11 237 1.4E-64 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_0034 88a756aaaad7eb18bfa8e2d7ec4f4048 244 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 14 230 2.3E-39 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_0034 88a756aaaad7eb18bfa8e2d7ec4f4048 244 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 15 232 5.1E-61 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_0034 88a756aaaad7eb18bfa8e2d7ec4f4048 244 SUPERFAMILY SSF51366 12 235 1.13E-56 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XF_0034 88a756aaaad7eb18bfa8e2d7ec4f4048 244 SMART SM00934 14 231 2.4E-66 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_0034 88a756aaaad7eb18bfa8e2d7ec4f4048 244 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 67 80 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XF_1948 694bd61e98cbe11dab75ed7eb869734a 233 Pfam PF02674 Colicin V production protein 2 140 3.0E-28 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 XF_0766 14b3db870b1fe31084d97d840a7262f9 135 Pfam PF04143 Sulphur transport 4 124 1.5E-9 T 14-10-2018 IPR007272 Sulphur transport domain XF_0523 1be171f4d027b848411c274fed50e048 480 Pfam PF09356 Phage conserved hypothetical protein BR0599 396 468 1.2E-9 T 14-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal XF_0523 1be171f4d027b848411c274fed50e048 480 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 3 170 7.8E-36 T 14-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal XF_2145 432c0e6e89bb04ea5bb75bd946209491 236 Gene3D G3DSA:1.20.58.220 115 226 2.2E-31 T 14-10-2018 IPR038078 PhoU-like domain superfamily XF_2145 432c0e6e89bb04ea5bb75bd946209491 236 Gene3D G3DSA:1.20.58.220 1 114 1.9E-30 T 14-10-2018 IPR038078 PhoU-like domain superfamily XF_2145 432c0e6e89bb04ea5bb75bd946209491 236 PIRSF PIRSF003107 7 222 2.9E-55 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 XF_2145 432c0e6e89bb04ea5bb75bd946209491 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 11 220 5.5E-59 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 XF_2145 432c0e6e89bb04ea5bb75bd946209491 236 SUPERFAMILY SSF109755 11 221 2.3E-62 T 14-10-2018 XF_2145 432c0e6e89bb04ea5bb75bd946209491 236 Pfam PF01895 PhoU domain 127 210 1.6E-16 T 14-10-2018 IPR026022 PhoU domain XF_2145 432c0e6e89bb04ea5bb75bd946209491 236 Pfam PF01895 PhoU domain 24 110 8.7E-19 T 14-10-2018 IPR026022 PhoU domain XF_1044 7080ef41896aee6327ba68b018310b56 160 Gene3D G3DSA:3.10.129.10 8 159 9.0E-54 T 14-10-2018 XF_1044 7080ef41896aee6327ba68b018310b56 160 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 16 159 33.419 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XF_1044 7080ef41896aee6327ba68b018310b56 160 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 16 156 6.7E-63 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XF_1044 7080ef41896aee6327ba68b018310b56 160 SUPERFAMILY SSF54637 15 156 6.43E-44 T 14-10-2018 IPR029069 HotDog domain superfamily XF_1044 7080ef41896aee6327ba68b018310b56 160 Pfam PF07977 FabA-like domain 25 150 1.6E-39 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XF_2447 d4cd7e74facd53298fce8e34125491f5 293 SUPERFAMILY SSF161098 54 280 5.49E-64 T 14-10-2018 IPR035906 MetI-like superfamily XF_2447 d4cd7e74facd53298fce8e34125491f5 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 279 1.5E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XF_2447 d4cd7e74facd53298fce8e34125491f5 293 Gene3D G3DSA:1.10.3720.10 50 291 1.8E-78 T 14-10-2018 IPR035906 MetI-like superfamily XF_1356 7682fca13d8f97c024c93cef8180ec2a 255 SUPERFAMILY SSF53474 3 251 9.64E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1356 7682fca13d8f97c024c93cef8180ec2a 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 1 252 40.761 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 XF_1356 7682fca13d8f97c024c93cef8180ec2a 255 Pfam PF12697 Alpha/beta hydrolase family 12 242 5.3E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XF_1356 7682fca13d8f97c024c93cef8180ec2a 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 7 251 5.8E-112 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 XF_1356 7682fca13d8f97c024c93cef8180ec2a 255 Gene3D G3DSA:3.40.50.1820 1 254 9.5E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1366 b70850cff2748428e09fea4ca2522605 126 SUPERFAMILY SSF52833 16 123 7.65E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_1366 b70850cff2748428e09fea4ca2522605 126 Gene3D G3DSA:3.40.30.10 56 120 8.7E-9 T 14-10-2018 XF_1366 b70850cff2748428e09fea4ca2522605 126 Pfam PF02630 SCO1/SenC 18 53 1.0E-5 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XF_1366 b70850cff2748428e09fea4ca2522605 126 Gene3D G3DSA:3.40.30.10 10 55 4.0E-7 T 14-10-2018 XF_1031 2a27bdcb2afbc63efbfd3b834d0f54a6 870 PIRSF PIRSF500064 30 869 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 XF_1031 2a27bdcb2afbc63efbfd3b834d0f54a6 870 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 51 861 31.174 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 XF_1031 2a27bdcb2afbc63efbfd3b834d0f54a6 870 PIRSF PIRSF000437 58 870 0.0 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 XF_1031 2a27bdcb2afbc63efbfd3b834d0f54a6 870 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 54 857 1.3E-296 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 XF_1031 2a27bdcb2afbc63efbfd3b834d0f54a6 870 Pfam PF01553 Acyltransferase 338 469 3.1E-21 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XF_1031 2a27bdcb2afbc63efbfd3b834d0f54a6 870 SMART SM00563 345 472 5.7E-26 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XF_1031 2a27bdcb2afbc63efbfd3b834d0f54a6 870 SUPERFAMILY SSF69593 304 527 1.44E-26 T 14-10-2018 XF_1523 8fba4537a6fa3d2a1464b66447446c69 281 PIRSF PIRSF002786 2 277 2.7E-40 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 XF_1523 8fba4537a6fa3d2a1464b66447446c69 281 SUPERFAMILY SSF158544 96 192 3.92E-25 T 14-10-2018 IPR038072 GspK, central domain superfamily XF_1523 8fba4537a6fa3d2a1464b66447446c69 281 Pfam PF03934 Type II secretion system (T2SS), protein K 31 262 3.1E-46 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 XF_1523 8fba4537a6fa3d2a1464b66447446c69 281 Gene3D G3DSA:1.10.40.60 90 193 5.2E-19 T 14-10-2018 IPR038072 GspK, central domain superfamily XF_1696 f58d720d28d53b1d67f25b0a45ccba82 98 SUPERFAMILY SSF47598 25 65 5.11E-8 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XF_0619 e210c0ca8e4a844a2e33f03e03d9f35f 112 Gene3D G3DSA:3.30.70.120 1 112 1.3E-39 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XF_0619 e210c0ca8e4a844a2e33f03e03d9f35f 112 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 3.3E-30 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 XF_0619 e210c0ca8e4a844a2e33f03e03d9f35f 112 SUPERFAMILY SSF54913 2 106 1.63E-33 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta XF_1929 864399daeba02054eefd009f55b23c7d 131 Pfam PF00892 EamA-like transporter family 36 99 3.4E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XF_1929 864399daeba02054eefd009f55b23c7d 131 SUPERFAMILY SSF103481 32 101 3.79E-7 T 14-10-2018 XF_0838 5c3c7fc59f9b223ebe08c1eae2206088 464 Pfam PF09312 SurA N-terminal domain 33 150 1.9E-44 T 14-10-2018 IPR015391 SurA N-terminal XF_0838 5c3c7fc59f9b223ebe08c1eae2206088 464 Gene3D G3DSA:3.10.50.40 290 395 2.2E-66 T 14-10-2018 XF_0838 5c3c7fc59f9b223ebe08c1eae2206088 464 SUPERFAMILY SSF54534 292 393 8.5E-26 T 14-10-2018 XF_0838 5c3c7fc59f9b223ebe08c1eae2206088 464 Gene3D G3DSA:3.10.50.40 179 396 2.2E-66 T 14-10-2018 XF_0838 5c3c7fc59f9b223ebe08c1eae2206088 464 SUPERFAMILY SSF54534 177 280 8.5E-24 T 14-10-2018 XF_0838 5c3c7fc59f9b223ebe08c1eae2206088 464 Gene3D G3DSA:1.10.4030.10 30 153 5.3E-34 T 14-10-2018 XF_0838 5c3c7fc59f9b223ebe08c1eae2206088 464 Hamap MF_01183 Chaperone SurA [surA]. 9 437 30.287 T 14-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 XF_0838 5c3c7fc59f9b223ebe08c1eae2206088 464 SUPERFAMILY SSF109998 33 205 7.19E-41 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily XF_0838 5c3c7fc59f9b223ebe08c1eae2206088 464 Pfam PF00639 PPIC-type PPIASE domain 299 389 3.9E-25 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 XF_0838 5c3c7fc59f9b223ebe08c1eae2206088 464 Pfam PF00639 PPIC-type PPIASE domain 182 276 3.4E-18 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 XF_0043 74aa1edea8deca72a8f45a7df2551971 293 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 289 6.8E-106 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 XF_0043 74aa1edea8deca72a8f45a7df2551971 293 Gene3D G3DSA:3.40.50.150 1 293 6.8E-95 T 14-10-2018 XF_0043 74aa1edea8deca72a8f45a7df2551971 293 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 279 37.253 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 XF_0043 74aa1edea8deca72a8f45a7df2551971 293 SUPERFAMILY SSF53335 8 288 2.88E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0280 b3ff3b78e7a2f510694a4b843c21a89f 484 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 333 340 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XF_0280 b3ff3b78e7a2f510694a4b843c21a89f 484 PRINTS PR00481 Cytosol aminopeptidase signature 357 372 1.0E-39 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XF_0280 b3ff3b78e7a2f510694a4b843c21a89f 484 PRINTS PR00481 Cytosol aminopeptidase signature 248 265 1.0E-39 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XF_0280 b3ff3b78e7a2f510694a4b843c21a89f 484 PRINTS PR00481 Cytosol aminopeptidase signature 270 291 1.0E-39 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XF_0280 b3ff3b78e7a2f510694a4b843c21a89f 484 PRINTS PR00481 Cytosol aminopeptidase signature 307 328 1.0E-39 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XF_0280 b3ff3b78e7a2f510694a4b843c21a89f 484 PRINTS PR00481 Cytosol aminopeptidase signature 329 349 1.0E-39 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XF_0280 b3ff3b78e7a2f510694a4b843c21a89f 484 SUPERFAMILY SSF53187 168 482 1.1E-102 T 14-10-2018 XF_0280 b3ff3b78e7a2f510694a4b843c21a89f 484 Gene3D G3DSA:3.40.630.10 163 483 2.7E-116 T 14-10-2018 XF_0280 b3ff3b78e7a2f510694a4b843c21a89f 484 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 175 457 1.5E-99 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XF_0280 b3ff3b78e7a2f510694a4b843c21a89f 484 Gene3D G3DSA:3.40.220.10 36 160 1.1E-28 T 14-10-2018 XF_2773 ab505de065d99aa382466f1905fb3ce9 252 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 36 200 5.6E-27 T 14-10-2018 IPR008487 Protein of unknown function DUF769 XF_2644 19b071b3945408feb5ae33015a1bdef3 312 Gene3D G3DSA:3.40.50.2020 144 287 5.2E-126 T 14-10-2018 XF_2644 19b071b3945408feb5ae33015a1bdef3 312 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 XF_2644 19b071b3945408feb5ae33015a1bdef3 312 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 310 8.7E-116 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 XF_2644 19b071b3945408feb5ae33015a1bdef3 312 SMART SM01400 1 117 2.9E-63 T 14-10-2018 XF_2644 19b071b3945408feb5ae33015a1bdef3 312 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 2 117 3.2E-44 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 XF_2644 19b071b3945408feb5ae33015a1bdef3 312 SUPERFAMILY SSF53271 65 300 4.88E-60 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like XF_2644 19b071b3945408feb5ae33015a1bdef3 312 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 1 311 46.765 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 XF_2644 19b071b3945408feb5ae33015a1bdef3 312 Gene3D G3DSA:3.40.50.2020 3 299 5.2E-126 T 14-10-2018 XF_2644 19b071b3945408feb5ae33015a1bdef3 312 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 310 6.8E-29 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 XF_1756 f6bac9fa2253cbbcfae61db2cddde782 72 Pfam PF12553 Protein of unknown function (DUF3742) 1 45 1.3E-16 T 14-10-2018 IPR022213 Protein of unknown function DUF3742 XF_0322 b6d7e9af420ccbd1db5edab90d1d3d1f 231 Pfam PF00072 Response regulator receiver domain 4 111 3.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_0322 b6d7e9af420ccbd1db5edab90d1d3d1f 231 Gene3D G3DSA:3.40.50.2300 1 121 4.2E-34 T 14-10-2018 XF_0322 b6d7e9af420ccbd1db5edab90d1d3d1f 231 SMART SM00862 145 218 4.7E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XF_0322 b6d7e9af420ccbd1db5edab90d1d3d1f 231 SUPERFAMILY SSF52172 1 179 3.56E-37 T 14-10-2018 IPR011006 CheY-like superfamily XF_0322 b6d7e9af420ccbd1db5edab90d1d3d1f 231 SMART SM00448 1 112 7.8E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XF_0322 b6d7e9af420ccbd1db5edab90d1d3d1f 231 Gene3D G3DSA:1.10.10.10 122 228 7.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XF_0322 b6d7e9af420ccbd1db5edab90d1d3d1f 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 217 8.5E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XF_0371 6f15ec86c7da225f179f1f35939822be 222 Pfam PF04350 Pilus assembly protein, PilO 54 201 1.6E-50 T 14-10-2018 IPR007445 Pilus assembly protein, PilO XF_0371 6f15ec86c7da225f179f1f35939822be 222 PIRSF PIRSF016482 1 219 1.3E-103 T 14-10-2018 IPR007445 Pilus assembly protein, PilO XF_0371 6f15ec86c7da225f179f1f35939822be 222 Gene3D G3DSA:3.30.70.60 96 211 5.8E-34 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 XF_2586 fe3fcb74b6a55ce1a1051fb73b84eefc 452 SUPERFAMILY SSF56954 24 444 3.14E-86 T 14-10-2018 XF_2586 fe3fcb74b6a55ce1a1051fb73b84eefc 452 Gene3D G3DSA:1.20.1600.10 22 451 3.0E-109 T 14-10-2018 XF_2586 fe3fcb74b6a55ce1a1051fb73b84eefc 452 Pfam PF02321 Outer membrane efflux protein 235 428 1.7E-31 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 XF_2586 fe3fcb74b6a55ce1a1051fb73b84eefc 452 Pfam PF02321 Outer membrane efflux protein 24 210 9.3E-21 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 XF_2586 fe3fcb74b6a55ce1a1051fb73b84eefc 452 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 444 1.4E-121 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 XF_1201 0a175e6f9b0e6fd2af4edc49c9d697b5 226 SUPERFAMILY SSF56784 10 221 2.9E-47 T 14-10-2018 IPR036412 HAD-like superfamily XF_1201 0a175e6f9b0e6fd2af4edc49c9d697b5 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 191 5.9E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XF_1201 0a175e6f9b0e6fd2af4edc49c9d697b5 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 191 4.9E-25 T 14-10-2018 XF_1201 0a175e6f9b0e6fd2af4edc49c9d697b5 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 5.3E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XF_1201 0a175e6f9b0e6fd2af4edc49c9d697b5 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 5.3E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XF_1201 0a175e6f9b0e6fd2af4edc49c9d697b5 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 5.3E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XF_1201 0a175e6f9b0e6fd2af4edc49c9d697b5 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 5.3E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XF_1201 0a175e6f9b0e6fd2af4edc49c9d697b5 226 Gene3D G3DSA:1.10.150.240 26 91 6.7E-46 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XF_1201 0a175e6f9b0e6fd2af4edc49c9d697b5 226 Gene3D G3DSA:3.40.50.1000 13 195 6.7E-46 T 14-10-2018 IPR023214 HAD superfamily XF_1141 04033bf4fd517362a70d6402d11813a4 191 SMART SM00830 30 109 2.1E-12 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XF_1141 04033bf4fd517362a70d6402d11813a4 191 PIRSF PIRSF026640 4 191 1.4E-69 T 14-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XF_1141 04033bf4fd517362a70d6402d11813a4 191 SUPERFAMILY SSF48600 37 190 1.5E-40 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XF_1141 04033bf4fd517362a70d6402d11813a4 191 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 34 145 1.3E-33 T 14-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XF_1141 04033bf4fd517362a70d6402d11813a4 191 Pfam PF01817 Chorismate mutase type II 39 107 3.2E-7 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XF_1141 04033bf4fd517362a70d6402d11813a4 191 Gene3D G3DSA:1.20.1250.110 24 191 1.7E-52 T 14-10-2018 XF_0255 8d51615525bf23b7222f38612c4bb367 353 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 323 1.3E-88 T 14-10-2018 IPR016040 NAD(P)-binding domain XF_0255 8d51615525bf23b7222f38612c4bb367 353 Gene3D G3DSA:3.40.50.720 6 324 8.4E-119 T 14-10-2018 XF_0255 8d51615525bf23b7222f38612c4bb367 353 SUPERFAMILY SSF51735 5 338 4.62E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_0255 8d51615525bf23b7222f38612c4bb367 353 Gene3D G3DSA:3.90.25.10 202 332 8.4E-119 T 14-10-2018 XF_0255 8d51615525bf23b7222f38612c4bb367 353 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 6 339 8.9E-153 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 XF_0197 e4a7db438e4cd257ff64e4d6f4c5858b 220 Pfam PF01553 Acyltransferase 67 179 2.9E-13 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XF_0197 e4a7db438e4cd257ff64e4d6f4c5858b 220 SUPERFAMILY SSF69593 45 193 2.35E-20 T 14-10-2018 XF_0197 e4a7db438e4cd257ff64e4d6f4c5858b 220 SMART SM00563 70 182 9.0E-32 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XF_2396 e3f15bb269014fc9c87d5e6f5afdc45e 425 SUPERFAMILY SSF53383 13 406 2.42E-87 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XF_2396 e3f15bb269014fc9c87d5e6f5afdc45e 425 Gene3D G3DSA:3.90.1150.10 29 403 5.1E-117 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XF_2396 e3f15bb269014fc9c87d5e6f5afdc45e 425 Pfam PF00155 Aminotransferase class I and II 40 400 1.8E-45 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XF_2396 e3f15bb269014fc9c87d5e6f5afdc45e 425 Gene3D G3DSA:3.40.640.10 59 300 5.1E-117 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XF_2679 a8345879efeb203baa4cba1cc9c5c2b1 452 SUPERFAMILY SSF53474 259 448 1.41E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_2679 a8345879efeb203baa4cba1cc9c5c2b1 452 Gene3D G3DSA:3.40.50.1820 234 450 2.5E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_2679 a8345879efeb203baa4cba1cc9c5c2b1 452 PIRSF PIRSF029063 1 452 1.5E-177 T 14-10-2018 IPR011225 Type IV secretory pathway, VirJ component XF_2679 a8345879efeb203baa4cba1cc9c5c2b1 452 Pfam PF06057 Bacterial virulence protein (VirJ) 263 450 7.5E-82 T 14-10-2018 IPR010333 Bacterial virulence XF_0420 3ef80fc46b4ecdbdb938e6a8a45c807d 249 Pfam PF02405 Permease MlaE 35 245 3.1E-65 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 XF_0420 3ef80fc46b4ecdbdb938e6a8a45c807d 249 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 6 249 4.7E-69 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria XF_0602 783edd38baae484be21354709f58c055 73 Gene3D G3DSA:1.20.58.660 2 72 3.1E-6 T 14-10-2018 XF_0602 783edd38baae484be21354709f58c055 73 Pfam PF04325 Protein of unknown function (DUF465) 21 61 4.6E-9 T 14-10-2018 IPR007420 Protein of unknown function DUF465 XF_a0016 b5b220e1cbe566e4327613dfe46549ef 656 SUPERFAMILY SSF52540 85 533 4.35E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_a0016 b5b220e1cbe566e4327613dfe46549ef 656 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 88 540 1.1E-107 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 XF_a0016 b5b220e1cbe566e4327613dfe46549ef 656 Gene3D G3DSA:3.40.50.300 297 531 5.2E-44 T 14-10-2018 XF_2274 40a7918323b7c49852b97db34af14cd0 80 Gene3D G3DSA:3.40.50.850 5 80 9.7E-21 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 XF_2274 40a7918323b7c49852b97db34af14cd0 80 Pfam PF00857 Isochorismatase family 11 62 4.1E-5 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 XF_2274 40a7918323b7c49852b97db34af14cd0 80 SUPERFAMILY SSF52499 4 66 1.05E-15 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 XF_1736 8a932207241d0b319f1a1591b447b44e 131 Pfam PF10012 Uncharacterized protein conserved in bacteria (DUF2255) 11 123 1.5E-43 T 14-10-2018 IPR016888 Uncharacterised conserved protein UCP028498 XF_1736 8a932207241d0b319f1a1591b447b44e 131 PIRSF PIRSF028498 1 131 1.0E-65 T 14-10-2018 IPR016888 Uncharacterised conserved protein UCP028498 XF_2616 c10c55371359ef547521ea0cfc1f66a2 138 Gene3D G3DSA:3.30.370.10 38 131 9.3E-9 T 14-10-2018 IPR035905 Barstar-like superfamily XF_2616 c10c55371359ef547521ea0cfc1f66a2 138 SUPERFAMILY SSF52038 39 130 3.01E-22 T 14-10-2018 IPR035905 Barstar-like superfamily XF_2616 c10c55371359ef547521ea0cfc1f66a2 138 Pfam PF01337 Barstar (barnase inhibitor) 42 125 1.5E-22 T 14-10-2018 IPR000468 Barstar (barnase inhibitor) XF_2142 d85d39d5fbae440f7fc2d268099b8a13 324 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 25 317 5.8E-91 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 XF_2142 d85d39d5fbae440f7fc2d268099b8a13 324 SUPERFAMILY SSF161098 31 311 3.83E-34 T 14-10-2018 IPR035906 MetI-like superfamily XF_2142 d85d39d5fbae440f7fc2d268099b8a13 324 Gene3D G3DSA:1.10.3720.10 77 322 1.4E-34 T 14-10-2018 IPR035906 MetI-like superfamily XF_2142 d85d39d5fbae440f7fc2d268099b8a13 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 311 9.4E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XF_2695 37169fc187fec375144f373c6d31f1f3 228 SMART SM00382 29 216 1.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_2695 37169fc187fec375144f373c6d31f1f3 228 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_2695 37169fc187fec375144f373c6d31f1f3 228 SUPERFAMILY SSF52540 3 225 1.62E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_2695 37169fc187fec375144f373c6d31f1f3 228 Pfam PF00005 ABC transporter 20 167 4.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_2695 37169fc187fec375144f373c6d31f1f3 228 Gene3D G3DSA:3.40.50.300 2 228 4.5E-64 T 14-10-2018 XF_2101 cfbbce11e67a95992595afc66d7361b6 202 Pfam PF02698 DUF218 domain 45 189 1.9E-28 T 14-10-2018 IPR003848 Domain of unknown function DUF218 XF_2240 919a6275c8fab3eb877f98ccee9e6f23 243 Gene3D G3DSA:1.10.10.880 16 83 1.0E-7 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 XF_2240 919a6275c8fab3eb877f98ccee9e6f23 243 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 19 88 4.1E-9 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 XF_2240 919a6275c8fab3eb877f98ccee9e6f23 243 SUPERFAMILY SSF89069 16 83 8.37E-13 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 SUPERFAMILY SSF103491 14 430 1.02E-117 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 434 1.0E-116 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 PIRSF PIRSF004557 11 445 9.7E-111 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 439 27.06 T 14-10-2018 IPR026593 Protein translocase subunit SecY XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-87 T 14-10-2018 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-87 T 14-10-2018 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 408 426 1.9E-87 T 14-10-2018 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 321 343 1.9E-87 T 14-10-2018 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 1.9E-87 T 14-10-2018 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 274 293 1.9E-87 T 14-10-2018 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 376 394 1.9E-87 T 14-10-2018 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 1.9E-87 T 14-10-2018 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-87 T 14-10-2018 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 Pfam PF00344 SecY translocase 76 422 2.7E-104 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XF_1172 bd363498a0e9d61a50633ec3dac2c7ad 457 Gene3D G3DSA:1.10.3370.10 11 435 7.8E-146 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XF_0272 189a6b86b116abe6fc700ce1a7298800 191 Pfam PF07273 Protein of unknown function (DUF1439) 58 156 1.4E-8 T 14-10-2018 IPR010835 Protein of unknown function DUF1439 XF_0272 189a6b86b116abe6fc700ce1a7298800 191 Gene3D G3DSA:3.15.10.40 56 184 1.4E-6 T 14-10-2018 XF_1887 4353ae668de57dfbb27545ec7b8738bd 716 Pfam PF10459 Peptidase S46 22 713 2.1E-262 T 14-10-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 XF_1887 4353ae668de57dfbb27545ec7b8738bd 716 SUPERFAMILY SSF50494 29 700 4.5E-24 T 14-10-2018 IPR009003 Peptidase S1, PA clan XF_1887 4353ae668de57dfbb27545ec7b8738bd 716 Gene3D G3DSA:2.40.10.10 629 691 7.4E-6 T 14-10-2018 XF_1157 d90a9b70ecb39375d2d7370c08e44d2c 111 Pfam PF00237 Ribosomal protein L22p/L17e 6 107 8.2E-32 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 XF_1157 d90a9b70ecb39375d2d7370c08e44d2c 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XF_1157 d90a9b70ecb39375d2d7370c08e44d2c 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.5E-39 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1157 d90a9b70ecb39375d2d7370c08e44d2c 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 26.243 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_1157 d90a9b70ecb39375d2d7370c08e44d2c 111 Gene3D G3DSA:3.90.470.10 1 111 6.1E-41 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 XF_1157 d90a9b70ecb39375d2d7370c08e44d2c 111 SUPERFAMILY SSF54843 1 108 1.05E-38 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 XF_1689 6cb439a7e14f5f98665cf198eab13a94 145 Pfam PF11681 Protein of unknown function (DUF3277) 26 132 9.1E-10 T 14-10-2018 IPR021695 Bacteriophage rv5, Orf52 XF_1584 6cb439a7e14f5f98665cf198eab13a94 145 Pfam PF11681 Protein of unknown function (DUF3277) 26 132 9.1E-10 T 14-10-2018 IPR021695 Bacteriophage rv5, Orf52 XF_0797 45831c8b69a17c40b3ec0776fea47399 367 Gene3D G3DSA:3.40.50.2000 16 168 2.9E-107 T 14-10-2018 XF_0797 45831c8b69a17c40b3ec0776fea47399 367 Gene3D G3DSA:3.40.50.2000 169 318 2.9E-107 T 14-10-2018 XF_0797 45831c8b69a17c40b3ec0776fea47399 367 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 15 366 35.544 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0797 45831c8b69a17c40b3ec0776fea47399 367 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 15 152 7.3E-39 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0797 45831c8b69a17c40b3ec0776fea47399 367 SUPERFAMILY SSF53756 14 364 2.96E-108 T 14-10-2018 XF_0797 45831c8b69a17c40b3ec0776fea47399 367 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 12 362 1.7E-112 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XF_0797 45831c8b69a17c40b3ec0776fea47399 367 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 192 356 9.9E-36 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 XF_1666 a07855038d63b9a2dcd6052bbf1a1a9f 137 Gene3D G3DSA:3.30.1330.70 16 137 1.0E-7 T 14-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 XF_1666 a07855038d63b9a2dcd6052bbf1a1a9f 137 SUPERFAMILY SSF103084 18 136 1.05E-19 T 14-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 XF_1791 9e6bfff3eb7f42b3fd726763724a9517 87 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_1791 9e6bfff3eb7f42b3fd726763724a9517 87 SUPERFAMILY SSF54523 8 57 3.56E-15 T 14-10-2018 XF_1791 9e6bfff3eb7f42b3fd726763724a9517 87 Pfam PF00114 Pilin (bacterial filament) 36 86 5.7E-5 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XF_1791 9e6bfff3eb7f42b3fd726763724a9517 87 Gene3D G3DSA:3.30.700.10 8 87 3.6E-15 T 14-10-2018 XF_1791 9e6bfff3eb7f42b3fd726763724a9517 87 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 6.7E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_1791 9e6bfff3eb7f42b3fd726763724a9517 87 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 28 1.0E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_1832 f4b426208f94f0fdbc0cf7210880229d 215 Pfam PF02036 SCP-2 sterol transfer family 22 123 6.8E-16 T 14-10-2018 IPR003033 SCP2 sterol-binding domain XF_1327 001c597989e4c770475e05e531e1c010 189 SUPERFAMILY SSF101874 31 187 4.71E-33 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XF_1327 001c597989e4c770475e05e531e1c010 189 Pfam PF04264 YceI-like domain 47 181 2.3E-24 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XF_1327 001c597989e4c770475e05e531e1c010 189 Gene3D G3DSA:2.40.128.110 48 189 1.3E-29 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XF_1327 001c597989e4c770475e05e531e1c010 189 SMART SM00867 29 187 3.0E-31 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XF_2523 a5e2b55039da062833fbefa6e0e2f24a 188 SUPERFAMILY SSF50249 6 169 1.88E-10 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_2523 a5e2b55039da062833fbefa6e0e2f24a 188 Gene3D G3DSA:2.40.50.140 1 172 2.8E-48 T 14-10-2018 XF_2523 a5e2b55039da062833fbefa6e0e2f24a 188 Pfam PF10991 Protein of unknown function (DUF2815) 2 173 6.0E-47 T 14-10-2018 IPR022595 Protein of unknown function DUF2815 XF_0142 6b1531b7e57fc3d896128e71ca007a4f 399 Pfam PF01757 Acyltransferase family 23 375 3.0E-19 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 XF_1560 4c5ff444aa08453b5d27ec8f79d26ea7 301 Pfam PF07120 Protein of unknown function (DUF1376) 8 91 9.2E-32 T 14-10-2018 IPR010781 Protein of unknown function DUF1376 XF_2269 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2269 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2269 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 3.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2269 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 104 120 3.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2269 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.4E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2269 44732b4b0cd1a8c83a8847619fe13b47 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 153 250 3.6E-15 T 14-10-2018 XF_2269 44732b4b0cd1a8c83a8847619fe13b47 255 Pfam PF00106 short chain dehydrogenase 6 121 2.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2269 44732b4b0cd1a8c83a8847619fe13b47 255 Gene3D G3DSA:3.40.50.720 1 252 3.5E-45 T 14-10-2018 XF_2269 44732b4b0cd1a8c83a8847619fe13b47 255 SUPERFAMILY SSF51735 5 253 8.61E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1520 a86be27b8e2c6dbb070ea2e470ab9518 168 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 42 8.9E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_1520 a86be27b8e2c6dbb070ea2e470ab9518 168 SUPERFAMILY SSF54523 24 110 3.3E-7 T 14-10-2018 XF_1520 a86be27b8e2c6dbb070ea2e470ab9518 168 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 21 41 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_2091 0fe47ef965ac76f43a4424f5dd985a14 1664 SUPERFAMILY SSF51735 1002 1340 2.1E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2091 0fe47ef965ac76f43a4424f5dd985a14 1664 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 100 1657 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 XF_2091 0fe47ef965ac76f43a4424f5dd985a14 1664 Pfam PF12466 Glutamate dehydrogenase N terminal 2 96 1.6E-47 T 14-10-2018 IPR024727 Bacterial NAD-glutamate dehydrogenase, N-terminal XF_2091 0fe47ef965ac76f43a4424f5dd985a14 1664 PIRSF PIRSF036761 2 1664 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 XF_2091 0fe47ef965ac76f43a4424f5dd985a14 1664 SUPERFAMILY SSF53223 812 998 3.45E-20 T 14-10-2018 XF_1533 f79d9fad7e6c83493d0ed1e3bf190241 229 SUPERFAMILY SSF53067 107 214 1.42E-19 T 14-10-2018 XF_1533 f79d9fad7e6c83493d0ed1e3bf190241 229 Gene3D G3DSA:3.30.420.40 94 185 2.5E-64 T 14-10-2018 XF_1533 f79d9fad7e6c83493d0ed1e3bf190241 229 SUPERFAMILY SSF53067 3 102 9.06E-28 T 14-10-2018 XF_1533 f79d9fad7e6c83493d0ed1e3bf190241 229 Gene3D G3DSA:3.30.420.40 3 216 2.5E-64 T 14-10-2018 XF_1533 f79d9fad7e6c83493d0ed1e3bf190241 229 Pfam PF00814 Glycoprotease family 28 220 4.2E-29 T 14-10-2018 IPR000905 Gcp-like domain XF_1533 f79d9fad7e6c83493d0ed1e3bf190241 229 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 2.0E-51 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 XF_0584 6ab8fff5a9e5f37cd379c70addbaa501 308 Pfam PF11306 Protein of unknown function (DUF3108) 75 289 3.2E-22 T 14-10-2018 IPR021457 Protein of unknown function DUF3108 XF_0708 bf2a61d8d55072931f3622b9ebe629c0 103 Pfam PF16083 LydA holin phage, holin superfamily III 9 83 7.9E-20 T 14-10-2018 IPR032126 LydA-like holin XF_2503 bf2a61d8d55072931f3622b9ebe629c0 103 Pfam PF16083 LydA holin phage, holin superfamily III 9 83 7.9E-20 T 14-10-2018 IPR032126 LydA-like holin XF_2317 b6925c42ac0fb1d91a7fafa054afe33f 220 PIRSF PIRSF028438 1 208 4.2E-86 T 14-10-2018 IPR016884 Uncharacterised conserved protein UCP028438 XF_1798 6f69ce88564d89db7abb829e1299e9ee 343 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 34 339 8.0E-12 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX XF_0294 3be8f30803711c6c032527cea61ca90b 114 Gene3D G3DSA:3.30.2010.10 11 110 1.0E-15 T 14-10-2018 XF_0294 3be8f30803711c6c032527cea61ca90b 114 Pfam PF01863 Protein of unknown function DUF45 9 95 1.6E-27 T 14-10-2018 IPR002725 Protein of unknown function DUF45 XF_2207 25132c737f5ec9ec82fa348075a294ee 483 PIRSF PIRSF006060 12 482 5.4E-96 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XF_2207 25132c737f5ec9ec82fa348075a294ee 483 Gene3D G3DSA:1.20.1740.10 25 481 1.3E-123 T 14-10-2018 XF_2207 25132c737f5ec9ec82fa348075a294ee 483 Pfam PF13520 Amino acid permease 35 451 3.3E-58 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XF_1049 96d3e47185ffead0da3bf63cc8e1f10c 284 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 240 266 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 XF_1049 96d3e47185ffead0da3bf63cc8e1f10c 284 Pfam PF01148 Cytidylyltransferase family 4 279 6.8E-71 T 14-10-2018 XF_2768 0f93da6363c057023d165ee4f2632a97 96 Pfam PF04591 Protein of unknown function, DUF596 21 96 8.9E-27 T 14-10-2018 IPR007670 Protein of unknown function DUF596 XF_2768 0f93da6363c057023d165ee4f2632a97 96 SUPERFAMILY SSF160472 2 89 3.01E-30 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_2768 0f93da6363c057023d165ee4f2632a97 96 Gene3D G3DSA:1.10.3510.10 2 94 3.7E-13 T 14-10-2018 IPR023138 NMB0513-like superfamily XF_1972 b9af3310c22c543a8ec9b66dbf813387 148 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 1 148 30.797 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 XF_1972 b9af3310c22c543a8ec9b66dbf813387 148 SUPERFAMILY SSF75217 1 147 1.05E-42 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases XF_1972 b9af3310c22c543a8ec9b66dbf813387 148 PIRSF PIRSF029256 1 148 2.7E-61 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 XF_1972 b9af3310c22c543a8ec9b66dbf813387 148 Gene3D G3DSA:3.40.1280.10 1 148 2.7E-60 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XF_1972 b9af3310c22c543a8ec9b66dbf813387 148 Pfam PF00588 SpoU rRNA Methylase family 1 138 2.1E-31 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 XF_0607 2c78f5d08fada16f94d2694a4540c305 456 SUPERFAMILY SSF53335 22 168 7.97E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0607 2c78f5d08fada16f94d2694a4540c305 456 Gene3D G3DSA:3.40.50.150 16 179 4.2E-14 T 14-10-2018 XF_0607 2c78f5d08fada16f94d2694a4540c305 456 Pfam PF05050 Methyltransferase FkbM domain 30 190 1.6E-17 T 14-10-2018 IPR006342 Methyltransferase FkbM XF_0607 2c78f5d08fada16f94d2694a4540c305 456 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 28 154 1.2E-16 T 14-10-2018 IPR006342 Methyltransferase FkbM XF_1984 2bf34300b52828364dfb9108bad20022 187 SUPERFAMILY SSF51161 3 174 4.85E-45 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily XF_1984 2bf34300b52828364dfb9108bad20022 187 Gene3D G3DSA:2.160.10.10 3 186 4.2E-60 T 14-10-2018 XF_1984 2bf34300b52828364dfb9108bad20022 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 1.3E-6 T 14-10-2018 IPR001451 Hexapeptide repeat XF_1984 2bf34300b52828364dfb9108bad20022 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 0.0013 T 14-10-2018 IPR001451 Hexapeptide repeat XF_0890 9925925c6c283e576f0808ab7c65a375 282 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 282 2.5E-142 T 14-10-2018 IPR008487 Protein of unknown function DUF769 XF_2082 305912db50c9a55d1b5a3ce1e60b86a8 268 Pfam PF00106 short chain dehydrogenase 5 186 1.0E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2082 305912db50c9a55d1b5a3ce1e60b86a8 268 SUPERFAMILY SSF51735 4 238 5.4E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_2082 305912db50c9a55d1b5a3ce1e60b86a8 268 Gene3D G3DSA:3.40.50.720 2 250 5.8E-67 T 14-10-2018 XF_2082 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 1.7E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2082 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.7E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2082 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.7E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2082 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 9.3E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2082 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 9.3E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2082 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.3E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2082 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 9.3E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_2082 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 9.3E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XF_0482 c8145bf448ace19001e6688e1fd7ecaf 148 Pfam PF00436 Single-strand binding protein family 5 108 7.1E-37 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XF_0482 c8145bf448ace19001e6688e1fd7ecaf 148 PIRSF PIRSF002070 1 148 6.0E-34 T 14-10-2018 XF_0482 c8145bf448ace19001e6688e1fd7ecaf 148 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 126 1.1E-43 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XF_0482 c8145bf448ace19001e6688e1fd7ecaf 148 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 34.166 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XF_0482 c8145bf448ace19001e6688e1fd7ecaf 148 SUPERFAMILY SSF50249 3 148 9.94E-50 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold XF_0482 c8145bf448ace19001e6688e1fd7ecaf 148 Gene3D G3DSA:2.40.50.140 1 124 1.7E-42 T 14-10-2018 XF_1594 300b17fba1af963d28f8b8539731805c 213 Gene3D G3DSA:2.40.50.230 28 126 2.7E-25 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XF_0534 dc13efcddcb6b1c64de538ec59037d5c 114 SMART SM00530 58 112 2.3E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_0534 dc13efcddcb6b1c64de538ec59037d5c 114 Pfam PF01381 Helix-turn-helix 60 110 6.8E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XF_0534 dc13efcddcb6b1c64de538ec59037d5c 114 SUPERFAMILY SSF47413 60 109 1.18E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_0534 dc13efcddcb6b1c64de538ec59037d5c 114 Gene3D G3DSA:1.10.260.40 60 113 1.3E-9 T 14-10-2018 XF_1763 63deda732a3b6e7ee858eb44a26e7c7f 280 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 12 182 5.9E-6 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 XF_1763 63deda732a3b6e7ee858eb44a26e7c7f 280 Gene3D G3DSA:3.40.50.620 4 196 1.7E-23 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_1763 63deda732a3b6e7ee858eb44a26e7c7f 280 SUPERFAMILY SSF52402 9 189 8.37E-14 T 14-10-2018 XF_0565 4f5f31837981fe946c4896b7694ae947 301 Pfam PF04366 Las17-binding protein actin regulator 100 212 8.1E-30 T 14-10-2018 IPR007461 Ysc84 actin-binding domain XF_2666 6f78528a79def11c3e3905094ceec36c 198 Pfam PF01914 MarC family integral membrane protein 3 192 3.3E-49 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 XF_2713 f91daf40e85765125fea4ce01a55e141 868 SUPERFAMILY SSF56935 25 868 9.39E-95 T 14-10-2018 XF_2713 f91daf40e85765125fea4ce01a55e141 868 Pfam PF00593 TonB dependent receptor 403 867 2.5E-42 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XF_2713 f91daf40e85765125fea4ce01a55e141 868 Gene3D G3DSA:2.170.130.10 26 170 1.0E-15 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XF_2713 f91daf40e85765125fea4ce01a55e141 868 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 34 868 1.3E-233 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor XF_2713 f91daf40e85765125fea4ce01a55e141 868 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 165 2.3E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain XF_2713 f91daf40e85765125fea4ce01a55e141 868 Gene3D G3DSA:2.40.170.20 248 868 1.6E-50 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XF_2706 972749aff5f79ec72bb020a44a3f0aa0 573 Pfam PF04389 Peptidase family M28 313 514 5.6E-27 T 14-10-2018 IPR007484 Peptidase M28 XF_2706 972749aff5f79ec72bb020a44a3f0aa0 573 Gene3D G3DSA:3.40.630.10 242 525 2.0E-36 T 14-10-2018 XF_2706 972749aff5f79ec72bb020a44a3f0aa0 573 Pfam PF02225 PA domain 147 224 2.7E-5 T 14-10-2018 IPR003137 PA domain XF_2706 972749aff5f79ec72bb020a44a3f0aa0 573 SUPERFAMILY SSF53187 42 534 1.82E-42 T 14-10-2018 XF_2706 972749aff5f79ec72bb020a44a3f0aa0 573 SUPERFAMILY SSF52025 145 229 3.66E-5 T 14-10-2018 XF_1766 3b3e0a8cd737c5362cecdf8df3eaa2d4 260 SUPERFAMILY SSF69118 47 255 4.17E-38 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 XF_1766 3b3e0a8cd737c5362cecdf8df3eaa2d4 260 Gene3D G3DSA:1.20.1290.10 25 258 1.4E-47 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 XF_1766 3b3e0a8cd737c5362cecdf8df3eaa2d4 260 Pfam PF02627 Carboxymuconolactone decarboxylase family 167 251 1.5E-10 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 XF_1766 3b3e0a8cd737c5362cecdf8df3eaa2d4 260 Pfam PF02627 Carboxymuconolactone decarboxylase family 48 110 4.3E-6 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 XF_2330 e06377511a9c791a750059da676eeac8 526 Pfam PF00561 alpha/beta hydrolase fold 115 342 4.2E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XF_2330 e06377511a9c791a750059da676eeac8 526 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 147 158 2.0E-5 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XF_2330 e06377511a9c791a750059da676eeac8 526 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 116 124 2.0E-5 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XF_2330 e06377511a9c791a750059da676eeac8 526 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 227 241 2.0E-5 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XF_2330 e06377511a9c791a750059da676eeac8 526 SUPERFAMILY SSF53474 106 482 5.82E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_2330 e06377511a9c791a750059da676eeac8 526 Pfam PF08386 TAP-like protein 409 508 4.1E-20 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal XF_a0062 01ded503cd2cf5cbacb8125339217caf 284 Pfam PF12083 Domain of unknown function (DUF3560) 25 146 2.8E-43 T 14-10-2018 IPR021944 Protein of unknown function DUF3560 XF_1847 10b913006d2855083fe09e0727d862aa 32 Pfam PF01526 Tn3 transposase DDE domain 5 30 3.9E-7 T 14-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 XF_2126 5cb699e7baba26043010b2e947768c78 81 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 7 68 5.7E-22 T 14-10-2018 IPR031856 Putative bacterial antitoxin YdaS XF_2126 5cb699e7baba26043010b2e947768c78 81 Gene3D G3DSA:1.10.260.40 5 81 5.0E-24 T 14-10-2018 XF_2126 5cb699e7baba26043010b2e947768c78 81 SUPERFAMILY SSF47413 7 64 8.45E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_2175 1aa61b1fb83b3957ea880c5623cc1bc6 201 Pfam PF06197 Protein of unknown function (DUF998) 13 194 1.5E-23 T 14-10-2018 IPR009339 Protein of unknown function DUF998 XF_0096 82b7e4d0f5c58a3ffcaf239c925da0b8 126 SUPERFAMILY SSF64076 4 122 2.22E-27 T 14-10-2018 IPR036748 MTH938-like superfamily XF_0096 82b7e4d0f5c58a3ffcaf239c925da0b8 126 Gene3D G3DSA:3.40.1230.10 14 123 1.5E-28 T 14-10-2018 IPR036748 MTH938-like superfamily XF_0096 82b7e4d0f5c58a3ffcaf239c925da0b8 126 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 20 121 5.4E-22 T 14-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein XF_1693 dbfada8a154516660edcb12626f1005d 79 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 21 71 9.3E-14 T 14-10-2018 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 XF_2180 0c942af4bfc64cd83228ca116e54ac15 148 SUPERFAMILY SSF81301 34 138 2.45E-38 T 14-10-2018 XF_2180 0c942af4bfc64cd83228ca116e54ac15 148 Pfam PF02410 Ribosomal silencing factor during starvation 37 131 7.4E-28 T 14-10-2018 XF_2180 0c942af4bfc64cd83228ca116e54ac15 148 Gene3D G3DSA:3.30.460.10 31 144 2.5E-37 T 14-10-2018 XF_2180 0c942af4bfc64cd83228ca116e54ac15 148 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 34 131 1.1E-36 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS XF_2180 0c942af4bfc64cd83228ca116e54ac15 148 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 13 132 24.847 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS XF_a0006 c597788b392830f19c3dba4e5744fdc5 122 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 10 92 2.6E-25 T 14-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB XF_0805 2388a72c1b10ca03a266a540147e3088 319 Pfam PF01551 Peptidase family M23 204 298 2.2E-31 T 14-10-2018 IPR016047 Peptidase M23 XF_0805 2388a72c1b10ca03a266a540147e3088 319 Gene3D G3DSA:2.70.70.10 148 305 8.1E-45 T 14-10-2018 IPR011055 Duplicated hybrid motif XF_0805 2388a72c1b10ca03a266a540147e3088 319 SUPERFAMILY SSF51261 92 302 1.05E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif XF_a0043 944ec07a16be83dcff08a356e846cbf9 238 SUPERFAMILY SSF54427 103 237 5.7E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily XF_a0043 944ec07a16be83dcff08a356e846cbf9 238 Gene3D G3DSA:3.10.450.230 132 238 3.4E-6 T 14-10-2018 XF_a0043 944ec07a16be83dcff08a356e846cbf9 238 Pfam PF04335 VirB8 protein 26 237 2.5E-46 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 XF_1605 075f6157a20fb666b18ad0cf6687d873 295 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 11 89 1.4E-8 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 XF_1605 075f6157a20fb666b18ad0cf6687d873 295 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 103 195 1.0E-22 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 XF_1605 075f6157a20fb666b18ad0cf6687d873 295 Gene3D G3DSA:1.10.287.460 11 102 5.2E-11 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 XF_1605 075f6157a20fb666b18ad0cf6687d873 295 Gene3D G3DSA:1.10.287.460 103 183 7.4E-13 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 XF_1605 075f6157a20fb666b18ad0cf6687d873 295 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 203 291 7.2E-26 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XF_1605 075f6157a20fb666b18ad0cf6687d873 295 Gene3D G3DSA:3.10.50.40 184 292 3.6E-39 T 14-10-2018 XF_1605 075f6157a20fb666b18ad0cf6687d873 295 SUPERFAMILY SSF54534 110 294 9.43E-50 T 14-10-2018 XF_1495 c7bbdad2aa32ab75ea92129ace7a1490 148 Pfam PF02643 Uncharacterized ACR, COG1430 34 140 1.3E-32 T 14-10-2018 IPR003795 Protein of unknown function DUF192 XF_1495 c7bbdad2aa32ab75ea92129ace7a1490 148 Gene3D G3DSA:2.60.120.1140 18 142 9.4E-40 T 14-10-2018 IPR038695 Saro_0823-like superfamily XF_2034 1abfcd0779e57f4a199453dcc05c542d 433 Gene3D G3DSA:3.30.559.10 213 423 3.1E-11 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XF_2034 1abfcd0779e57f4a199453dcc05c542d 433 SUPERFAMILY SSF52777 5 152 7.11E-6 T 14-10-2018 XF_2034 1abfcd0779e57f4a199453dcc05c542d 433 Gene3D G3DSA:3.30.559.10 4 171 1.0E-12 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XF_a0005 fd6a67906e42d8cefaebd433e25e70f8 90 Pfam PF04956 TrbC/VIRB2 family 3 85 1.9E-18 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 XF_1898 25cc545c08a56c189d55fb3f75cd43ae 346 TIGRFAM TIGR02794 tolA_full: protein TolA 20 333 1.7E-20 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 XF_1898 25cc545c08a56c189d55fb3f75cd43ae 346 SUPERFAMILY SSF74653 234 345 5.3E-13 T 14-10-2018 XF_1898 25cc545c08a56c189d55fb3f75cd43ae 346 Gene3D G3DSA:3.30.1150.10 194 346 2.9E-14 T 14-10-2018 XF_1898 25cc545c08a56c189d55fb3f75cd43ae 346 Pfam PF13103 TonB C terminal 257 329 1.9E-8 T 14-10-2018 XF_0804 07d372ed72c13def90674cde3297acd8 90 Pfam PF05258 Protein of unknown function (DUF721) 2 36 2.3E-4 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 XF_2283 2e7e48e407acf7b64772fac428452261 317 Pfam PF00753 Metallo-beta-lactamase superfamily 66 251 7.8E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase XF_2283 2e7e48e407acf7b64772fac428452261 317 SMART SM00849 66 251 4.1E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase XF_2283 2e7e48e407acf7b64772fac428452261 317 SUPERFAMILY SSF56281 49 275 2.1E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XF_2283 2e7e48e407acf7b64772fac428452261 317 Gene3D G3DSA:3.60.15.10 48 286 7.7E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XF_1859 afa5345796cf3de266ea5968bd4801a8 392 Pfam PF02486 Replication initiation factor 171 351 6.5E-34 T 14-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 XF_2424 0c18091f4ad8c47b0fb607e3751d2621 106 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 2.9E-33 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2424 0c18091f4ad8c47b0fb607e3751d2621 106 SUPERFAMILY SSF141091 1 100 5.23E-33 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2424 0c18091f4ad8c47b0fb607e3751d2621 106 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XF_2424 0c18091f4ad8c47b0fb607e3751d2621 106 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 8.8E-36 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_2424 0c18091f4ad8c47b0fb607e3751d2621 106 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 24.492 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XF_0320 b674d77e5fdd8804bc019ba7d26287a7 457 TIGRFAM TIGR00784 citMHS: citrate transporter 15 450 6.1E-189 T 14-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 XF_0320 b674d77e5fdd8804bc019ba7d26287a7 457 Pfam PF03600 Citrate transporter 27 401 9.3E-55 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 XF_1701 49efef0310a4bf18353730b80c940276 117 SUPERFAMILY SSF160719 25 106 9.29E-6 T 14-10-2018 XF_0051 32464a8265093245efa1764d792404ee 121 SUPERFAMILY SSF69349 12 101 5.18E-5 T 14-10-2018 XF_0758 98170756652869bb1086edbb926464ac 162 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 7 136 1.6E-31 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 XF_0758 98170756652869bb1086edbb926464ac 162 SUPERFAMILY SSF52540 28 124 1.19E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_0758 98170756652869bb1086edbb926464ac 162 Gene3D G3DSA:3.40.50.300 1 150 1.5E-32 T 14-10-2018 XF_0758 98170756652869bb1086edbb926464ac 162 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 125 7.3E-29 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 XF_1223 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 Gene3D G3DSA:3.40.50.300 2 238 5.4E-61 T 14-10-2018 XF_1223 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 Pfam PF00005 ABC transporter 27 171 1.6E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XF_1223 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 SMART SM00382 36 218 9.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain XF_1223 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 SUPERFAMILY SSF52540 6 238 3.59E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XF_1223 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XF_1079 c1c2e15121da2071819d27ef22f52643 220 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 187 6.3E-31 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel XF_0513 c471e2c018e495cdc04847b8090a7343 154 Pfam PF00959 Phage lysozyme 37 143 3.6E-17 T 14-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XF_0513 c471e2c018e495cdc04847b8090a7343 154 Gene3D G3DSA:1.10.530.40 2 152 1.0E-48 T 14-10-2018 XF_0513 c471e2c018e495cdc04847b8090a7343 154 SUPERFAMILY SSF53955 9 151 8.7E-49 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily XF_2746 d602227295ca51d07c8f35d98071cc61 262 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 1 261 1.4E-78 T 14-10-2018 IPR008487 Protein of unknown function DUF769 XF_0094 21958886c4e34a915988112374615a6b 213 Gene3D G3DSA:3.40.50.150 28 211 6.8E-52 T 14-10-2018 XF_0094 21958886c4e34a915988112374615a6b 213 PIRSF PIRSF005461 1 212 2.6E-70 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 XF_0094 21958886c4e34a915988112374615a6b 213 Pfam PF01728 FtsJ-like methyltransferase 29 203 2.8E-49 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 XF_0094 21958886c4e34a915988112374615a6b 213 SUPERFAMILY SSF53335 3 204 1.89E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XF_0094 21958886c4e34a915988112374615a6b 213 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 205 26.573 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 XF_0461 9cb4c4dc50054ebbc1326957fa4b9d51 211 Pfam PF13413 Helix-turn-helix domain 28 88 2.0E-19 T 14-10-2018 XF_0461 9cb4c4dc50054ebbc1326957fa4b9d51 211 SUPERFAMILY SSF47413 25 91 5.04E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_0461 9cb4c4dc50054ebbc1326957fa4b9d51 211 Gene3D G3DSA:1.10.260.40 18 125 6.7E-21 T 14-10-2018 XF_1876 60f136d561ab227bb3a9ec50aba98925 94 Pfam PF10734 Protein of unknown function (DUF2523) 5 83 1.1E-17 T 14-10-2018 IPR019670 Protein of unkown function DUF2523 XF_0936 605c739d44a1a200ef444180404004cb 376 Pfam PF09566 SacI restriction endonuclease 189 293 2.0E-4 T 14-10-2018 IPR019066 Restriction endonuclease, type II, SacI XF_2570 b3da8ebe0446a82d1a1515fc67b15292 111 Pfam PF13828 Domain of unknown function (DUF4190) 26 90 3.1E-22 T 14-10-2018 IPR025241 Domain of unknown function DUF4190 XF_1814 07d729794c74a882c59dcd1227a6b151 615 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 59 219 5.0E-14 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like XF_2654 0a06309fe6e07880b703db71b4d62ff5 175 Gene3D G3DSA:3.40.50.1820 1 175 2.5E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_2654 0a06309fe6e07880b703db71b4d62ff5 175 SUPERFAMILY SSF53474 4 172 6.34E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_2479 67b439b48df007c5240eb72062ed2c4a 360 Pfam PF05954 Phage late control gene D protein (GPD) 36 320 1.1E-30 T 14-10-2018 XF_2479 67b439b48df007c5240eb72062ed2c4a 360 SUPERFAMILY SSF69279 5 186 9.07E-13 T 14-10-2018 XF_a0052 250fb089ceaf2070414e746bde546592 151 Gene3D G3DSA:3.30.70.240 3 101 5.7E-18 T 14-10-2018 XF_a0052 250fb089ceaf2070414e746bde546592 151 Pfam PF09827 CRISPR associated protein Cas2 4 91 1.7E-7 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 XF_2027 1688c813cd5aad6bd240bcf35a755ed0 210 Pfam PF03692 Putative zinc- or iron-chelating domain 73 148 5.4E-10 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein XF_1705 02018f532a62900de26e45972a26e653 186 Pfam PF11041 Protein of unknown function (DUF2612) 3 68 6.5E-14 T 14-10-2018 IPR021283 Protein of unknown function DUF2612 XF_1705 02018f532a62900de26e45972a26e653 186 Pfam PF11041 Protein of unknown function (DUF2612) 76 158 4.1E-25 T 14-10-2018 IPR021283 Protein of unknown function DUF2612 XF_1299 0730ac8cc703612516fc49f605742409 200 Gene3D G3DSA:2.60.120.590 14 200 7.7E-59 T 14-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily XF_1299 0730ac8cc703612516fc49f605742409 200 SUPERFAMILY SSF51197 10 198 2.75E-59 T 14-10-2018 XF_1299 0730ac8cc703612516fc49f605742409 200 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 22 196 3.8E-32 T 14-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like XF_1123 0fc9a034f81729be0f1b1f88262fd749 242 Gene3D G3DSA:3.30.110.170 41 239 2.4E-59 T 14-10-2018 XF_1123 0fc9a034f81729be0f1b1f88262fd749 242 Pfam PF04402 Protein of unknown function (DUF541) 40 238 2.0E-43 T 14-10-2018 IPR007497 Protein of unknown function DUF541 XF_1123 0fc9a034f81729be0f1b1f88262fd749 242 Gene3D G3DSA:3.30.70.2970 51 158 2.4E-59 T 14-10-2018 XF_1918 8f70f1003498a44dbd2746755c81c258 190 Gene3D G3DSA:1.20.910.10 1 187 2.1E-44 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 XF_1918 8f70f1003498a44dbd2746755c81c258 190 SUPERFAMILY SSF48613 5 177 1.08E-24 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 XF_1918 8f70f1003498a44dbd2746755c81c258 190 Pfam PF14518 Iron-containing redox enzyme 2 163 1.7E-19 T 14-10-2018 XF_0010 020b849994fb8e8f3212daf69d560f5d 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 115 236 3.3E-36 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel XF_2171 7d5a5bbec284ec2bf762686829272b6c 178 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XF_2171 7d5a5bbec284ec2bf762686829272b6c 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.243 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XF_2171 7d5a5bbec284ec2bf762686829272b6c 178 Gene3D G3DSA:3.90.80.10 1 175 1.1E-69 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XF_2171 7d5a5bbec284ec2bf762686829272b6c 178 SUPERFAMILY SSF50324 6 175 9.29E-68 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XF_2171 7d5a5bbec284ec2bf762686829272b6c 178 Pfam PF00719 Inorganic pyrophosphatase 18 174 9.7E-54 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XF_0856 2484caa34623ad9d4adcbf67416a64d3 205 Pfam PF09335 SNARE associated Golgi protein 41 164 9.2E-9 T 14-10-2018 IPR032816 SNARE associated Golgi protein XF_1080 4593615afb87e59af3fd3eb435a09320 145 Gene3D G3DSA:3.30.420.270 61 132 1.4E-11 T 14-10-2018 XF_1080 4593615afb87e59af3fd3eb435a09320 145 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 136 9.6E-31 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 XF_1747 96428418c3a2a81095ef28c3b3f2d0d2 213 SUPERFAMILY SSF51735 1 200 7.97E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily XF_1747 96428418c3a2a81095ef28c3b3f2d0d2 213 Pfam PF13460 NAD(P)H-binding 8 189 2.0E-48 T 14-10-2018 IPR016040 NAD(P)-binding domain XF_1747 96428418c3a2a81095ef28c3b3f2d0d2 213 Gene3D G3DSA:3.40.50.720 1 212 1.2E-55 T 14-10-2018 XF_2506 d760e3b6d2a92220c2389393131d44c4 460 Pfam PF02498 BRO family, N-terminal domain 203 286 6.7E-28 T 14-10-2018 IPR003497 BRO N-terminal domain XF_2506 d760e3b6d2a92220c2389393131d44c4 460 SMART SM01040 202 286 1.2E-41 T 14-10-2018 IPR003497 BRO N-terminal domain XF_1649 b0f4efb8ca3a2b54e89b0a4c348ddf25 273 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 2 269 2.2E-81 T 14-10-2018 IPR019276 Protein of unkown function DUF2303 XF_0601 d2962cb9f53828f04c7bc3d2485da84e 297 SUPERFAMILY SSF103088 202 280 2.35E-7 T 14-10-2018 IPR036737 OmpA-like domain superfamily XF_0896 fb0c7bf6794d8fc8abf53e730faec2e5 283 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 283 9.4E-141 T 14-10-2018 IPR008487 Protein of unknown function DUF769 XF_0721 f1a2a272f8e5b93f73b86a6c47d6260d 105 SUPERFAMILY SSF143011 15 105 7.85E-14 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XF_0721 f1a2a272f8e5b93f73b86a6c47d6260d 105 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 15 105 3.3E-34 T 14-10-2018 IPR007711 Toxin HigB-1 XF_0721 f1a2a272f8e5b93f73b86a6c47d6260d 105 Gene3D G3DSA:3.30.2310.20 12 105 2.0E-35 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XF_2177 bdca6f50cd56843cbb60be5750390619 202 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 180 23.307 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 XF_2177 bdca6f50cd56843cbb60be5750390619 202 Gene3D G3DSA:3.30.160.150 39 187 2.0E-28 T 14-10-2018 XF_1658 be152af365adc1f611120baf72a19499 231 Pfam PF00717 Peptidase S24-like 147 211 4.4E-8 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XF_1658 be152af365adc1f611120baf72a19499 231 SUPERFAMILY SSF51306 124 223 1.22E-12 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XF_0417 905ae0de74cdbc160a3e75c7aa1e85a8 101 Pfam PF13466 STAS domain 14 93 1.2E-11 T 14-10-2018 IPR002645 STAS domain XF_0417 905ae0de74cdbc160a3e75c7aa1e85a8 101 Gene3D G3DSA:3.30.750.24 5 101 7.3E-9 T 14-10-2018 IPR036513 STAS domain superfamily XF_0417 905ae0de74cdbc160a3e75c7aa1e85a8 101 SUPERFAMILY SSF52091 1 98 1.75E-11 T 14-10-2018 IPR036513 STAS domain superfamily XF_1597 1786449dde41682b71f9cd5f01ae803f 98 PIRSF PIRSF028744 1 98 6.2E-41 T 14-10-2018 IPR014056 Addiction module killer protein, predicted XF_1597 1786449dde41682b71f9cd5f01ae803f 98 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 96 3.1E-40 T 14-10-2018 IPR014056 Addiction module killer protein, predicted XF_1964 9f0c09e5a56c5a867403873e0738c350 127 Pfam PF03692 Putative zinc- or iron-chelating domain 4 97 4.9E-14 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein XF_0932 1e51371ced2faa70bc3762a181bbadab 83 Gene3D G3DSA:2.30.30.90 1 81 9.4E-23 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain XF_0932 1e51371ced2faa70bc3762a181bbadab 83 SMART SM00899 1 77 2.6E-17 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 XF_0932 1e51371ced2faa70bc3762a181bbadab 83 SUPERFAMILY SSF50037 11 77 7.1E-13 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal XF_0932 1e51371ced2faa70bc3762a181bbadab 83 Pfam PF04023 FeoA domain 1 75 1.9E-16 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 XF_1525 fddf647dbcf1a8366a49eb4639aebdd8 210 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 77 191 1.2E-25 T 14-10-2018 IPR034756 Type II secretion system (T2SS), protein M subtype b XF_1265 510f54960ce0d7168a00b59df9509647 309 SUPERFAMILY SSF82171 61 292 2.16E-5 T 14-10-2018 XF_2214 ead71161b5786135b28021122fdf3a23 257 Gene3D G3DSA:3.20.20.70 1 257 1.2E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XF_2214 ead71161b5786135b28021122fdf3a23 257 SUPERFAMILY SSF51366 1 255 7.85E-68 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XF_2214 ead71161b5786135b28021122fdf3a23 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 9.3E-96 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 XF_2214 ead71161b5786135b28021122fdf3a23 257 Pfam PF00977 Histidine biosynthesis protein 5 238 4.2E-69 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 XF_2214 ead71161b5786135b28021122fdf3a23 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 42.659 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 XF_0872 04e3b64f8b61fc5ddeee645564dfc018 181 SUPERFAMILY SSF56925 22 181 3.92E-17 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XF_0872 04e3b64f8b61fc5ddeee645564dfc018 181 Gene3D G3DSA:2.40.160.20 6 181 1.2E-29 T 14-10-2018 XF_0872 04e3b64f8b61fc5ddeee645564dfc018 181 Pfam PF03922 OmpW family 3 181 1.4E-54 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 XF_0032 6b0f24be713bc11370771bccc71405f0 1230 Pfam PF05567 Neisseria PilC beta-propeller domain 744 1046 1.9E-58 T 14-10-2018 IPR008707 PilC beta-propeller domain XF_0032 6b0f24be713bc11370771bccc71405f0 1230 SUPERFAMILY SSF50998 740 1208 1.18E-8 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XF_1504 9e6e172d9dbc487f9384b8911dc33ffe 300 Pfam PF03755 YicC-like family, N-terminal region 15 166 4.5E-35 T 14-10-2018 IPR013527 YicC-like, N-terminal XF_1504 9e6e172d9dbc487f9384b8911dc33ffe 300 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 14 300 8.0E-78 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 XF_1504 9e6e172d9dbc487f9384b8911dc33ffe 300 Pfam PF08340 Domain of unknown function (DUF1732) 216 300 1.0E-34 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 XF_1301 84741f94ee424b3fe935c98709afd56a 308 Pfam PF02470 MlaD protein 40 115 2.1E-14 T 14-10-2018 IPR003399 Mce/MlaD XF_0479 27fee421cdcd357f8098e81d8fb71d79 125 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 1 19 2.3E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0479 27fee421cdcd357f8098e81d8fb71d79 125 SUPERFAMILY SSF54523 1 114 7.85E-23 T 14-10-2018 XF_0479 27fee421cdcd357f8098e81d8fb71d79 125 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 20 106 3.5E-24 T 14-10-2018 IPR031982 Type IV minor pilin ComP XF_0479 27fee421cdcd357f8098e81d8fb71d79 125 Gene3D G3DSA:3.30.700.10 1 124 1.8E-20 T 14-10-2018 XF_0254 3b00ebc3b24466137d3665dc0ce9d7e1 249 SMART SM00893 23 211 7.8E-53 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 XF_0254 3b00ebc3b24466137d3665dc0ce9d7e1 249 PIRSF PIRSF000090 1 249 1.1E-79 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 XF_0254 3b00ebc3b24466137d3665dc0ce9d7e1 249 SUPERFAMILY SSF52402 1 242 1.12E-74 T 14-10-2018 XF_0254 3b00ebc3b24466137d3665dc0ce9d7e1 249 Pfam PF01012 Electron transfer flavoprotein domain 26 206 4.1E-38 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 XF_0254 3b00ebc3b24466137d3665dc0ce9d7e1 249 Gene3D G3DSA:3.40.50.620 1 248 7.8E-77 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XF_1596 1ec49d39db50c0ebf77394a2c4a309e5 99 SUPERFAMILY SSF47413 33 92 4.09E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XF_1596 1ec49d39db50c0ebf77394a2c4a309e5 99 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 6 93 6.2E-39 T 14-10-2018 IPR014057 Uncharacterized protein HI1420 XF_1679 fbda1bc32aa4d2125af08274aacff09f 281 Pfam PF04233 Phage Mu protein F like protein 167 272 1.7E-28 T 14-10-2018 IPR006528 Phage head morphogenesis domain XF_1679 fbda1bc32aa4d2125af08274aacff09f 281 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 173 275 1.6E-21 T 14-10-2018 IPR006528 Phage head morphogenesis domain XF_1574 fbda1bc32aa4d2125af08274aacff09f 281 Pfam PF04233 Phage Mu protein F like protein 167 272 1.7E-28 T 14-10-2018 IPR006528 Phage head morphogenesis domain XF_1574 fbda1bc32aa4d2125af08274aacff09f 281 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 173 275 1.6E-21 T 14-10-2018 IPR006528 Phage head morphogenesis domain XF_1703 3b4504b6e39ff12e61ae03e403ac8f2c 102 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 6 96 1.9E-41 T 14-10-2018 IPR014056 Addiction module killer protein, predicted XF_1703 3b4504b6e39ff12e61ae03e403ac8f2c 102 PIRSF PIRSF028744 1 102 1.5E-41 T 14-10-2018 IPR014056 Addiction module killer protein, predicted XF_1703 3b4504b6e39ff12e61ae03e403ac8f2c 102 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 15 92 5.4E-7 T 14-10-2018 IPR009241 Toxin HigB-like XF_0539 cabf5fa8448052e1e1f6fffb7ce1d78b 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 3.1E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0539 cabf5fa8448052e1e1f6fffb7ce1d78b 187 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 26 7.2E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_0539 cabf5fa8448052e1e1f6fffb7ce1d78b 187 Pfam PF00114 Pilin (bacterial filament) 36 171 1.2E-25 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XF_0539 cabf5fa8448052e1e1f6fffb7ce1d78b 187 SUPERFAMILY SSF54523 8 171 4.39E-18 T 14-10-2018 XF_2192 98614d2e9ea4fd7c203c838675e980fc 380 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 238 326 1.6E-9 T 14-10-2018 IPR008487 Protein of unknown function DUF769 XF_1069 9804174ba8382f5e9594dbd491ed3cf6 72 Pfam PF07896 Protein of unknown function (DUF1674) 42 72 2.0E-13 T 14-10-2018 IPR012875 Protein of unknown function DUF1674 XF_0101 2262656b39f488cf2fb8f59800993190 94 Gene3D G3DSA:2.60.260.40 38 92 5.2E-10 T 14-10-2018 XF_0101 2262656b39f488cf2fb8f59800993190 94 Pfam PF10276 Zinc-finger domain 65 90 1.1E-7 T 14-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XF_1779 1613c7bc15993c1c564e6c0793f3a2b3 177 Pfam PF11358 Protein of unknown function (DUF3158) 11 167 1.1E-70 T 14-10-2018 IPR021502 Protein of unknown function DUF3158 XF_1514 af73accf36d90172f1314c01951289e5 303 Pfam PF03547 Membrane transport protein 151 293 3.6E-8 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 XF_1398 a8adfc1f3e14d6c66cecd77c3cff488e 406 Pfam PF00999 Sodium/hydrogen exchanger family 18 378 4.5E-24 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 XF_1398 a8adfc1f3e14d6c66cecd77c3cff488e 406 Gene3D G3DSA:1.20.1530.20 12 386 1.1E-31 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily XF_1074 44f406a008501f6de9719b49bc54dee8 97 Gene3D G3DSA:1.10.150.250 15 96 1.2E-24 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily XF_1074 44f406a008501f6de9719b49bc54dee8 97 Pfam PF03937 Flavinator of succinate dehydrogenase 23 90 2.5E-20 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase XF_1074 44f406a008501f6de9719b49bc54dee8 97 SUPERFAMILY SSF109910 16 94 4.18E-21 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily XF_2687 d0061877e2c0041ed952a40f2e1e1a89 175 Pfam PF11304 Protein of unknown function (DUF3106) 32 90 3.7E-7 T 14-10-2018 IPR021455 Protein of unknown function DUF3106 XF_0199 12076c21b93d83da0b5f5d09d4c06635 235 Pfam PF04367 Protein of unknown function (DUF502) 81 181 1.2E-26 T 14-10-2018 IPR007462 Protein of unknown function DUF502 XF_0382 8e56071d29cd354a987f9e5b237bdbc2 60 TIGRFAM TIGR04560 ribo_THX: ribosomal small subunit protein bTHX 1 24 3.3E-13 T 14-10-2018 IPR030826 30S ribosomal protein GO:0005840 XF_0382 8e56071d29cd354a987f9e5b237bdbc2 60 Pfam PF17067 Ribosomal protein S31e 2 36 8.9E-9 T 14-10-2018 IPR030826 30S ribosomal protein GO:0005840 XF_0975 31247a4b7ef7e96879a193eb67a6eeee 389 Pfam PF07396 Phosphate-selective porin O and P 41 389 7.1E-98 T 14-10-2018 IPR010870 Phosphate-selective porin O/P XF_0975 31247a4b7ef7e96879a193eb67a6eeee 389 SUPERFAMILY SSF56935 43 381 3.05E-10 T 14-10-2018 XF_0975 31247a4b7ef7e96879a193eb67a6eeee 389 Gene3D G3DSA:2.40.160.10 31 389 5.4E-73 T 14-10-2018 IPR023614 Porin domain superfamily XF_0510 aee3a5f4f6a837143331258cadf82520 520 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 58 488 6.3E-95 T 14-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XF_0510 aee3a5f4f6a837143331258cadf82520 520 Pfam PF05136 Phage portal protein, lambda family 51 384 5.4E-84 T 14-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XF_0941 be1161f8e3873f601c3cc3c480d33752 152 Pfam PF04134 Protein of unknown function, DUF393 26 135 3.5E-32 T 14-10-2018 IPR007263 Protein of unknown function DUF393 XF_0653 d67bde8e397f5f16494fdad5676bd8d8 212 Pfam PF00877 NlpC/P60 family 102 208 3.0E-29 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain XF_0653 d67bde8e397f5f16494fdad5676bd8d8 212 SUPERFAMILY SSF54001 79 211 6.62E-42 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XF_0653 d67bde8e397f5f16494fdad5676bd8d8 212 Gene3D G3DSA:3.90.1720.10 62 206 2.7E-41 T 14-10-2018 XF_2077 2f51925845e012d2bca787e77f2852b0 219 SUPERFAMILY SSF50494 121 182 7.48E-6 T 14-10-2018 IPR009003 Peptidase S1, PA clan XF_2077 2f51925845e012d2bca787e77f2852b0 219 Gene3D G3DSA:2.40.10.10 121 219 1.4E-11 T 14-10-2018 XF_1407 6d18e69966af33e38bf82904458270bf 116 SUPERFAMILY SSF69754 12 110 6.15E-31 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like XF_1407 6d18e69966af33e38bf82904458270bf 116 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 14 103 5.6E-24 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 XF_1407 6d18e69966af33e38bf82904458270bf 116 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 12 108 5.2E-27 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 XF_1407 6d18e69966af33e38bf82904458270bf 116 Gene3D G3DSA:3.30.160.100 12 116 5.3E-29 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like XF_0470 78717aafad0eb33c815aa50ccedd465c 530 Pfam PF12792 CSS motif domain associated with EAL 45 240 4.0E-34 T 14-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain XF_0470 78717aafad0eb33c815aa50ccedd465c 530 Pfam PF00563 EAL domain 278 510 4.9E-68 T 14-10-2018 IPR001633 EAL domain XF_0470 78717aafad0eb33c815aa50ccedd465c 530 Gene3D G3DSA:3.20.20.450 274 528 9.8E-85 T 14-10-2018 IPR035919 EAL domain superfamily XF_0470 78717aafad0eb33c815aa50ccedd465c 530 SUPERFAMILY SSF141868 277 523 1.19E-78 T 14-10-2018 IPR035919 EAL domain superfamily XF_0470 78717aafad0eb33c815aa50ccedd465c 530 SMART SM00052 271 515 5.6E-91 T 14-10-2018 IPR001633 EAL domain XF_1437 34a68da9df81eb261079805c521f4cda 260 Gene3D G3DSA:3.40.30.10 68 258 2.0E-48 T 14-10-2018 XF_1437 34a68da9df81eb261079805c521f4cda 260 SUPERFAMILY SSF52833 74 251 1.87E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_1437 34a68da9df81eb261079805c521f4cda 260 Pfam PF01323 DSBA-like thioredoxin domain 95 239 4.4E-10 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 XF_0491 d8bcc92e5143c9dce49ba98dab5ceddb 154 Pfam PF07603 Protein of unknown function (DUF1566) 30 138 4.4E-14 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 XF_1303 0e023966870bb4198f00e5f8b22446bf 396 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 152 392 4.6E-69 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria XF_1303 0e023966870bb4198f00e5f8b22446bf 396 Pfam PF02405 Permease MlaE 180 388 7.5E-68 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 XF_1178 9a877363e3a8e23485b0482a8aa8453e 106 Pfam PF04380 Membrane fusogenic activity 21 97 3.4E-20 T 14-10-2018 IPR007475 Membrane fusogenic activity XF_0537 aa08dcbf8133c9b2059fd6a3140d0c24 135 Pfam PF13274 Protein of unknown function (DUF4065) 2 88 7.0E-9 T 14-10-2018 IPR025272 Domain of unknown function DUF4065 XF_0030 39cae5cf6de1599ed3adb7518e5fa209 316 Pfam PF16074 Type IV Pilus-assembly protein W 220 300 5.1E-7 T 14-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 XF_0030 39cae5cf6de1599ed3adb7518e5fa209 316 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 34 1.3E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site XF_1109 e128ccb825561d1dae5469c0397a44de 293 Gene3D G3DSA:3.30.70.2130 137 193 9.1E-6 T 14-10-2018 XF_1109 e128ccb825561d1dae5469c0397a44de 293 PIRSF PIRSF015283 1 293 5.0E-99 T 14-10-2018 IPR016631 Regulatory, RpfE XF_1811 4a59c216ee59e1dc1d534c58ec24bfe3 160 Pfam PF03843 Outer membrane lipoprotein Slp family 2 158 7.2E-42 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 XF_1811 4a59c216ee59e1dc1d534c58ec24bfe3 160 PIRSF PIRSF004982 1 160 2.3E-42 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 XF_0399 8db917f11971a3c499ca1079406bee34 64 Gene3D G3DSA:3.30.565.10 1 64 2.5E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XF_1513 a692f6da8d94fa9f3dc75bcdfb0dd118 173 Gene3D G3DSA:3.60.130.10 67 155 7.5E-9 T 14-10-2018 XF_1513 a692f6da8d94fa9f3dc75bcdfb0dd118 173 SUPERFAMILY SSF51197 23 150 5.89E-9 T 14-10-2018 XF_1416 4966b5fbe86b208a55f32bd6031ebb6f 100 Gene3D G3DSA:1.10.238.10 37 72 2.5E-5 T 14-10-2018 XF_1416 4966b5fbe86b208a55f32bd6031ebb6f 100 SUPERFAMILY SSF47473 41 80 4.56E-5 T 14-10-2018 IPR011992 EF-hand domain pair XF_0462 3f0b458e37475a4d7c913a5fd7d08dbd 73 Pfam PF13464 Domain of unknown function (DUF4115) 1 61 9.3E-8 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 XF_1837 6b4591ffd2148a95901c65ebd00b8eae 283 PIRSF PIRSF028477 3 283 8.9E-135 T 14-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 XF_1837 6b4591ffd2148a95901c65ebd00b8eae 283 Pfam PF09916 Uncharacterized protein conserved in bacteria (DUF2145) 54 256 3.3E-74 T 14-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 XF_2273 c5e30e6ff7dba779c07e424a922eb315 236 Pfam PF02677 Uncharacterized BCR, COG1636 19 193 6.2E-64 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 XF_2273 c5e30e6ff7dba779c07e424a922eb315 236 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 19 195 33.557 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 XF_2186 b9633c3e612c0ea064a1b277c6d0ccc5 206 SUPERFAMILY SSF144091 6 189 4.71E-35 T 14-10-2018 XF_2186 b9633c3e612c0ea064a1b277c6d0ccc5 206 Gene3D G3DSA:1.20.1540.10 2 195 8.4E-28 T 14-10-2018 IPR035952 Rhomboid-like superfamily XF_2186 b9633c3e612c0ea064a1b277c6d0ccc5 206 Pfam PF01694 Rhomboid family 40 188 1.8E-28 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 XF_a0029 083ec3298281c92dfbd5690894882d17 74 Gene3D G3DSA:3.30.2310.20 1 69 9.1E-9 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XF_0612 20992826c0e5c82fd4894fef1b59bf67 317 Gene3D G3DSA:3.90.550.10 2 214 3.9E-14 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_0612 20992826c0e5c82fd4894fef1b59bf67 317 SUPERFAMILY SSF53448 5 176 3.54E-15 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XF_0612 20992826c0e5c82fd4894fef1b59bf67 317 Pfam PF00535 Glycosyl transferase family 2 10 137 1.1E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XF_1489 ea0e457b4e5dc9d61d8ab0d27c20c00c 213 Pfam PF13899 Thioredoxin-like 92 177 1.7E-12 T 14-10-2018 XF_1489 ea0e457b4e5dc9d61d8ab0d27c20c00c 213 SUPERFAMILY SSF52833 73 205 9.35E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily XF_1489 ea0e457b4e5dc9d61d8ab0d27c20c00c 213 Gene3D G3DSA:3.40.30.10 79 209 9.3E-20 T 14-10-2018 XF_0600 b3ce7a8e2aa4461d00f14b8e75921f56 136 Pfam PF14346 Domain of unknown function (DUF4398) 30 127 2.4E-18 T 14-10-2018 IPR025511 Domain of unknown function DUF4398 XF_0600 b3ce7a8e2aa4461d00f14b8e75921f56 136 Gene3D G3DSA:1.20.1270.390 37 134 8.6E-10 T 14-10-2018 XF_1300 6120a0e807c5fbfbbf035ecf741881ac 213 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 32 192 1.2E-33 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component XF_1300 6120a0e807c5fbfbbf035ecf741881ac 213 Gene3D G3DSA:3.40.50.10610 20 210 2.4E-65 T 14-10-2018 XF_1300 6120a0e807c5fbfbbf035ecf741881ac 213 SUPERFAMILY SSF159594 30 200 1.44E-44 T 14-10-2018 XF_0769 27a03a2f46936731573de77b82523328 306 Gene3D G3DSA:3.30.1330.40 187 305 1.1E-10 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XF_0769 27a03a2f46936731573de77b82523328 306 SUPERFAMILY SSF55298 205 303 1.43E-5 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XF_0697 9b5a1065f23ada3983a78b775c8806ce 74 Gene3D G3DSA:1.10.260.40 8 74 1.7E-6 T 14-10-2018 XF_0476 6cfa698346bb9831ccc295c16266da81 164 Pfam PF14341 PilX N-terminal 20 67 1.7E-7 T 14-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain XF_0042 30aaa61b6fcccd7bb598ade436130fb4 420 Pfam PF07399 Putative Na+/H+ antiporter 7 419 2.1E-184 T 14-10-2018 IPR009978 Putative Na+/H+ antiporter XF_0196 a8e9308ec455e334ae1f09c24dbac527 174 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 98 154 3.5E-15 T 14-10-2018 IPR018637 Domain of unknown function DUF2059 XF_1387 5a5451702ce2a3f1728dd5fa6640b402 113 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 19 112 1.4E-36 T 14-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 XF_1387 5a5451702ce2a3f1728dd5fa6640b402 113 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 24 97 2.2E-15 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 XF_2392 7467c19f1a9ccf4e5cb9ce245e3aa6d9 205 SUPERFAMILY SSF51445 4 203 1.11E-49 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily XF_2392 7467c19f1a9ccf4e5cb9ce245e3aa6d9 205 Gene3D G3DSA:3.20.20.80 2 204 3.2E-51 T 14-10-2018 XF_2392 7467c19f1a9ccf4e5cb9ce245e3aa6d9 205 Pfam PF01183 Glycosyl hydrolases family 25 6 194 2.0E-37 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 XF_2458 279a2cfea6e291403ac8957352c005e1 54 Pfam PF04995 Heme exporter protein D (CcmD) 1 43 1.3E-8 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 XF_1538 dc0ca2e04f0306090614e71ba3a9daa0 159 SUPERFAMILY SSF47240 2 132 1.44E-16 T 14-10-2018 IPR009078 Ferritin-like superfamily XF_1538 dc0ca2e04f0306090614e71ba3a9daa0 159 Gene3D G3DSA:1.20.1260.10 5 143 6.4E-6 T 14-10-2018 IPR012347 Ferritin-like XF_1538 dc0ca2e04f0306090614e71ba3a9daa0 159 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 1 156 1.1E-36 T 14-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 XF_1508 0ef593b89891081cc09b4e280fed6095 834 Pfam PF07793 Protein of unknown function (DUF1631) 21 819 1.8E-211 T 14-10-2018 IPR012434 Protein of unknown function DUF1631 XF_0519 df700d3da5739c2b821c2ebcda15fe77 148 SUPERFAMILY SSF55729 22 89 6.67E-5 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase XF_1743 9e0acf4f7aa31eba8a616eef04207a41 351 Pfam PF07859 alpha/beta hydrolase fold 124 325 1.1E-43 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 XF_1743 9e0acf4f7aa31eba8a616eef04207a41 351 Gene3D G3DSA:3.40.50.1820 30 351 6.3E-79 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1743 9e0acf4f7aa31eba8a616eef04207a41 351 SUPERFAMILY SSF53474 58 351 4.51E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold XF_1278 7dda9a4a02324a8b158f850a500f6b24 451 Pfam PF04286 Protein of unknown function (DUF445) 67 441 1.4E-103 T 14-10-2018 IPR007383 Protein of unknown function DUF445 XF_1232 81da13d0e0c82c2625ce4cf49aacd92d 1179 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 850 1178 1.2E-53 T 14-10-2018 IPR007452 Translocation and assembly module TamB XF_a0023 75a4f1a32d26e9b9267a4247e3bfc08b 79 Gene3D G3DSA:1.10.1220.10 1 51 6.5E-31 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XF_a0023 75a4f1a32d26e9b9267a4247e3bfc08b 79 Pfam PF16762 Ribbon-helix-helix domain 2 78 1.8E-40 T 14-10-2018 IPR031914 XACb0070, ribbon-helix-helix domain XF_2345 f452ac04a71b55d65f45776514242b0e 145 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 16 133 27.847 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE XF_2345 f452ac04a71b55d65f45776514242b0e 145 Pfam PF04355 SmpA / OmlA family 44 113 6.0E-22 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 XF_2345 f452ac04a71b55d65f45776514242b0e 145 Gene3D G3DSA:3.30.1450.10 50 126 5.6E-28 T 14-10-2018 IPR037873 BamE-like XF_1838 ba68570ed6d9a5bc542508aeb54ba0d6 309 Pfam PF06258 Mitochondrial fission ELM1 9 304 2.1E-75 T 14-10-2018 IPR009367 Mitochondrial fission protein ELM1-like XF_2694 0957b5e887216dac64140493e8cdfb84 312 PIRSF PIRSF003097 17 308 3.5E-48 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 XF_1663 b8f771966612c5a99ff1336f6de2c3ac 381 Pfam PF02498 BRO family, N-terminal domain 25 111 6.1E-21 T 14-10-2018 IPR003497 BRO N-terminal domain XF_1663 b8f771966612c5a99ff1336f6de2c3ac 381 Pfam PF02498 BRO family, N-terminal domain 142 229 1.4E-24 T 14-10-2018 IPR003497 BRO N-terminal domain XF_1663 b8f771966612c5a99ff1336f6de2c3ac 381 SMART SM01040 24 111 1.4E-32 T 14-10-2018 IPR003497 BRO N-terminal domain XF_1663 b8f771966612c5a99ff1336f6de2c3ac 381 SMART SM01040 141 229 5.6E-39 T 14-10-2018 IPR003497 BRO N-terminal domain XF_0733 6d73006254f5a765f510c9027869f5ed 360 Pfam PF05954 Phage late control gene D protein (GPD) 36 320 1.1E-30 T 14-10-2018 XF_0733 6d73006254f5a765f510c9027869f5ed 360 SUPERFAMILY SSF69279 5 186 9.07E-13 T 14-10-2018 XF_0583 d29362112b9a752fa452532207ed4621 205 Pfam PF11306 Protein of unknown function (DUF3108) 6 199 2.0E-13 T 14-10-2018 IPR021457 Protein of unknown function DUF3108 XF_0506 b8b2058954f34f73ca4ba0b3653ba0be 488 Pfam PF05272 Virulence-associated protein E 136 335 1.7E-82 T 14-10-2018 IPR007936 Virulence-associated E XF_0532 0618f796356a5aa455b22c5dc64bae75 97 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 13 89 2.4E-18 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system XF_0302 6101fdc070ceebfdc802a5e16b2d920f 95 Gene3D G3DSA:2.40.420.20 66 94 1.4E-7 T 14-10-2018 XF_0302 6101fdc070ceebfdc802a5e16b2d920f 95 Gene3D G3DSA:2.40.30.170 3 60 1.4E-7 T 14-10-2018 XF_1863 dc0dc41009d9f943f4f3ff8ff891a252 73 Pfam PF11455 Protein of unknown function (DUF3018) 9 72 1.5E-28 T 14-10-2018 IPR021558 Protein of unknown function DUF3018 XF_1526 6bc376d0477acdc1c4103fbe362db3e6 255 ProDom PD046566 PATHWAY N GENERAL SECRETION PRECURSOR SIGNAL MEMBRANE XPSN TRANSMEMBRANE INNER 1 230 4.0E-123 T 14-10-2018 XF_a0034 ca951a011798762f9ed4dd8f6c7a0642 139 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 30 123 1.9E-20 T 14-10-2018 IPR009241 Toxin HigB-like XF_1704 cba328fae1cb2c3f25fa0283c2bf9750 387 Pfam PF04865 Baseplate J-like protein 79 229 5.7E-13 T 14-10-2018 IPR006949 Baseplate protein J-like XF_0527 36369e4c5853629a3a78433de662ab65 170 SUPERFAMILY SSF69349 7 166 3.06E-37 T 14-10-2018 XF_2119 ed0fe73d2f14f7f6c33d7c642d8e3fc4 159 Pfam PF05136 Phage portal protein, lambda family 51 149 3.3E-15 T 14-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XF_a0048 0c233eafefc4f26a28df2a51ae9bd05b 191 Pfam PF05713 Bacterial mobilisation protein (MobC) 132 171 8.0E-8 T 14-10-2018 IPR008687 Bacterial mobilisation XF_2365 e596da2e1946c6df71d1a2bddaff95be 363 Pfam PF01757 Acyltransferase family 28 337 3.3E-19 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 XF_2733 e4ca7d8584159187ff30c6ee07aadda8 510 Pfam PF11855 Protein of unknown function (DUF3375) 9 487 5.9E-153 T 14-10-2018 IPR021804 Protein of unknown function DUF3375 XF_0923 084f0ad2831f127f78d195ee3a1cc3e6 157 Hamap MF_00598 Protein Smg [smg]. 5 157 28.704 T 14-10-2018 IPR007456 Smg XF_0923 084f0ad2831f127f78d195ee3a1cc3e6 157 Pfam PF04361 Protein of unknown function (DUF494) 6 157 1.6E-53 T 14-10-2018 IPR007456 Smg XF_0444 3b7ada77eb8b2722d121f0fa79fe5eb9 116 Pfam PF13511 Domain of unknown function (DUF4124) 1 41 7.6E-12 T 14-10-2018 IPR025392 Domain of unknown function DUF4124 XF_0475 9d57210f3b6afe98a84bb809095f51f2 416 Pfam PF16074 Type IV Pilus-assembly protein W 276 411 2.0E-23 T 14-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 XF_0512 29d0ebe2aaa840510aea5d6a97cb4894 119 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 3 110 1.8E-25 T 14-10-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 XF_1761 d14cb0d521003ed6e72db321d45781ba 375 Pfam PF12101 Protein of unknown function (DUF3577) 80 195 3.1E-36 T 14-10-2018 IPR021960 Protein of unknown function DUF3577 XF_1761 d14cb0d521003ed6e72db321d45781ba 375 Pfam PF12101 Protein of unknown function (DUF3577) 206 332 2.1E-46 T 14-10-2018 IPR021960 Protein of unknown function DUF3577 XF_2089 d6fc2692bc609fce35d725e5169c1a64 319 Pfam PF06189 5'-nucleotidase 39 316 3.3E-104 T 14-10-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 XF_1420 c5547e32205d9c14c34ce782eb1d137a 66 Pfam PF13986 Domain of unknown function (DUF4224) 40 66 5.6E-8 T 14-10-2018 IPR025319 Domain of unknown function DUF4224 XF_1665 aa91d17e37c7e60763e0fd6468fe0ee6 362 Pfam PF07120 Protein of unknown function (DUF1376) 2 87 2.1E-33 T 14-10-2018 IPR010781 Protein of unknown function DUF1376 XF_1792 ec9ad68eb9cf2874833bf2621b7e1e2d 94 Pfam PF00114 Pilin (bacterial filament) 12 83 8.1E-9 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XF_2597 ad2d5a067ca90b5342aba96a7ee46532 215 Pfam PF13211 Protein of unknown function (DUF4019) 98 204 1.4E-26 T 14-10-2018 IPR025091 Protein of unknown function DUF4019 XF_1764 468a6cf0fbbbf9435602658726dbf3db 117 Pfam PF11284 Protein of unknown function (DUF3085) 22 111 6.9E-34 T 14-10-2018 IPR021436 Protein of unknown function DUF3085 XF_0370 96b62a9eb4015e4fadd10be912a410f0 220 Pfam PF05137 Fimbrial assembly protein (PilN) 100 184 2.7E-27 T 14-10-2018 IPR007813 Fimbrial assembly PilN XF_2062 438f27e5f7c3f9a91d91eb9a18cc223d 69 ProDom PD028710 PLASMID KORC REPRESSOR TRANSCRIPTIONAL TRANSCRIPTION DNA-BINDING REGULATION KLCC 4 69 2.0E-30 T 14-10-2018 IPR020136 Transcriptional repressor KorC XF_0764 d8dc8ba7f78333916ccbc705921056a4 264 Pfam PF01925 Sulfite exporter TauE/SafE 14 253 3.6E-45 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 XF_0104 a24ef5e15bafabc58919e8e9e6637088 279 PIRSF PIRSF026649 1 278 5.9E-85 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XF_0104 a24ef5e15bafabc58919e8e9e6637088 279 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 1 278 8.0E-110 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 XF_0104 a24ef5e15bafabc58919e8e9e6637088 279 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 269 2.3E-64 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XF_2664 d2fac8099f07d1641793051d4c5843e4 222 Pfam PF10053 Uncharacterized conserved protein (DUF2290) 24 220 3.3E-86 T 14-10-2018 IPR018742 Protein of unknown function DUF2290 XF_1214 5b6179ccc956b4718c7022246c9a357b 91 Pfam PF09900 Predicted membrane protein (DUF2127) 2 79 9.8E-25 T 14-10-2018 IPR021125 Protein of unknown function DUF2127 XF_2120 3257d8bf1939e4ecc00a0fbbbbc11abd 383 Pfam PF05876 Phage terminase large subunit (GpA) 54 319 1.1E-56 T 14-10-2018 IPR008866 Bacteriophage lambda, GpA XF_2567 9220895543315e4c1e3d6ac72118720f 267 Pfam PF01061 ABC-2 type transporter 23 228 1.2E-23 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 XF_2316 58bcb2ba14bc4eb5f05b5fa32caa2807 148 Pfam PF04865 Baseplate J-like protein 21 108 2.1E-11 T 14-10-2018 IPR006949 Baseplate protein J-like XF_0483 54d9d271481124d49699d0806b8e56c9 156 Pfam PF07505 Protein of unknown function (DUF5131) 12 123 1.3E-13 T 14-10-2018 IPR011101 Protein of unknown function DUF5131 XF_1261 261b4ec77d444656b17829cc12254153 161 Pfam PF06853 Protein of unknown function (DUF1249) 27 141 1.2E-23 T 14-10-2018 IPR009659 Protein of unknown function DUF1249 XF_0892 130ae37544987f65909e5b44a9ede3ed 282 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 282 1.1E-151 T 14-10-2018 IPR008487 Protein of unknown function DUF769 XF_2252 efd573ca1f5dfd2f581e6e8f196c2f13 126 Pfam PF04341 Protein of unknown function, DUF485 35 121 3.3E-27 T 14-10-2018 IPR007436 Protein of unknown function DUF485 XF_2121 0dbfbf63ea8c35eea74d3b8ad0cf158f 501 Pfam PF05272 Virulence-associated protein E 136 335 1.8E-82 T 14-10-2018 IPR007936 Virulence-associated E XF_0813 cb5af63219e80bede2c0dc0eab1b58f6 218 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 213 3.4E-50 T 14-10-2018 IPR018648 Protein of unknown function DUF2076