locus-tag class description P303_00050 PF00239 Resolvase, N terminal domain P303_00050 PF02796 Helix-turn-helix domain of resolvase P303_00105 PF03135 CagE, TrbE, VirB family, component of type IV transporter system P303_00130 PF04335 VirB8 protein P303_00140 PF03743 Bacterial conjugation TrbI-like protein P303_00145 PF00437 Type II/IV secretion system protein P303_00155 PF02534 Type IV secretory system Conjugative DNA transfer P303_00170 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system P303_00185 PF02954 Bacterial regulatory protein, Fis family P303_00185 PF00158 Sigma-54 interaction domain P303_00185 PF00072 Response regulator receiver domain P303_00190 PF00437 Type II/IV secretion system protein P303_00190 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain P303_00195 PF07963 Prokaryotic N-terminal methylation motif P303_00195 PF00114 Pilin (bacterial filament) P303_00205 PF00114 Pilin (bacterial filament) P303_00205 PF07963 Prokaryotic N-terminal methylation motif P303_00210 PF00482 Type II secretion system (T2SS), protein F P303_00215 PF06750 Bacterial Peptidase A24 N-terminal domain P303_00215 PF01478 Type IV leader peptidase family P303_00220 PF01121 Dephospho-CoA kinase P303_00225 PF00672 HAMP domain P303_00225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P303_00225 PF00512 His Kinase A (phospho-acceptor) domain P303_00230 PF00486 Transcriptional regulatory protein, C terminal P303_00230 PF00072 Response regulator receiver domain P303_00235 PF08443 RimK-like ATP-grasp domain P303_00235 PF18030 RimK PreATP-grasp domain P303_00250 PF03129 Anticodon binding domain P303_00250 PF02824 TGS domain P303_00250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) P303_00250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain P303_00255 PF05198 Translation initiation factor IF-3, N-terminal domain P303_00255 PF00707 Translation initiation factor IF-3, C-terminal domain P303_00260 PF01632 Ribosomal protein L35 P303_00265 PF00453 Ribosomal protein L20 P303_00270 PF01409 tRNA synthetases class II core domain (F) P303_00270 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain P303_00275 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain P303_00275 PF01588 Putative tRNA binding domain P303_00275 PF03483 B3/4 domain P303_00275 PF03147 Ferredoxin-fold anticodon binding domain P303_00275 PF03484 tRNA synthetase B5 domain P303_00280 PF00216 Bacterial DNA-binding protein P303_00300 PF18125 RlmM ferredoxin-like domain P303_00300 PF01728 FtsJ-like methyltransferase P303_00315 PF00570 HRDC domain P303_00315 PF01612 3'-5' exonuclease P303_00330 PF13742 OB-fold nucleic acid binding domain P303_00330 PF02601 Exonuclease VII, large subunit P303_00335 PF03853 YjeF-related protein N-terminus P303_00335 PF01256 Carbohydrate kinase P303_00340 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE P303_00345 PF11741 AMIN domain P303_00345 PF01520 N-acetylmuramoyl-L-alanine amidase P303_00350 PF01119 DNA mismatch repair protein, C-terminal domain P303_00350 PF08676 MutL C terminal dimerisation domain P303_00360 PF00692 dUTPase P303_00365 PF01925 Sulfite exporter TauE/SafE P303_00375 PF04143 Sulphur transport P303_00385 PF04273 Putative phosphatase (DUF442) P303_00385 PF00753 Metallo-beta-lactamase superfamily P303_00405 PF07977 FabA-like domain P303_00440 PF02597 ThiS family P303_00440 PF05690 Thiazole biosynthesis protein ThiG P303_00445 PF05690 Thiazole biosynthesis protein ThiG P303_00450 PF02390 Putative methyltransferase P303_00455 PF02080 TrkA-C domain P303_00455 PF03600 Citrate transporter P303_00465 PF02381 MraZ protein, putative antitoxin-like P303_00470 PF01795 MraW methylase family P303_00475 PF04999 Cell division protein FtsL P303_00480 PF03717 Penicillin-binding Protein dimerisation domain P303_00480 PF00905 Penicillin binding protein transpeptidase domain P303_00485 PF01225 Mur ligase family, catalytic domain P303_00485 PF02875 Mur ligase family, glutamate ligase domain P303_00485 PF08245 Mur ligase middle domain P303_00490 PF01225 Mur ligase family, catalytic domain P303_00490 PF02875 Mur ligase family, glutamate ligase domain P303_00490 PF08245 Mur ligase middle domain P303_00495 PF00953 Glycosyl transferase family 4 P303_00500 PF01098 Cell cycle protein P303_00505 PF04101 Glycosyltransferase family 28 C-terminal domain P303_00505 PF03033 Glycosyltransferase family 28 N-terminal domain P303_00510 PF08245 Mur ligase middle domain P303_00510 PF02875 Mur ligase family, glutamate ligase domain P303_00510 PF01225 Mur ligase family, catalytic domain P303_00515 PF07478 D-ala D-ala ligase C-terminus P303_00515 PF01820 D-ala D-ala ligase N-terminus P303_00525 PF02491 SHS2 domain inserted in FTSA P303_00530 PF00091 Tubulin/FtsZ family, GTPase domain P303_00530 PF12327 FtsZ family, C-terminal domain P303_00535 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase P303_00545 PF01551 Peptidase family M23 P303_00545 PF08525 Opacity-associated protein A N-terminal motif P303_00545 PF01476 LysM domain P303_00550 PF07516 SecA Wing and Scaffold domain P303_00550 PF02810 SEC-C motif P303_00550 PF01043 SecA preprotein cross-linking domain P303_00550 PF07517 SecA DEAD-like domain P303_00560 PF03330 Lytic transglycolase P303_00575 PF00675 Insulinase (Peptidase family M16) P303_00575 PF05193 Peptidase M16 inactive domain P303_00585 PF00150 Cellulase (glycosyl hydrolase family 5) P303_00585 PF00553 Cellulose binding domain P303_00595 PF01475 Ferric uptake regulator family P303_00600 PF00749 tRNA synthetases class I (E and Q), catalytic domain P303_00615 PF02887 Pyruvate kinase, alpha/beta domain P303_00615 PF00224 Pyruvate kinase, barrel domain P303_00625 PF00274 Fructose-bisphosphate aldolase class-I P303_00645 PF00291 Pyridoxal-phosphate dependent enzyme P303_00650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases P303_00650 PF14824 Sirohaem biosynthesis protein central P303_00650 PF10414 Sirohaem synthase dimerisation region P303_00655 PF03466 LysR substrate binding domain P303_00655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family P303_00660 PF01494 FAD binding domain P303_00665 PF01494 FAD binding domain P303_00675 PF03968 OstA-like protein P303_00675 PF04453 LPS transport system D P303_00680 PF09312 SurA N-terminal domain P303_00680 PF00639 PPIC-type PPIASE domain P303_00685 PF04166 Pyridoxal phosphate biosynthetic protein PdxA P303_00690 PF01301 Glycosyl hydrolases family 35 P303_00695 PF07971 Glycosyl hydrolase family 92 P303_00695 PF17678 Glycosyl hydrolase family 92 N-terminal domain P303_00710 PF14310 Fibronectin type III-like domain P303_00710 PF00933 Glycosyl hydrolase family 3 N terminal domain P303_00710 PF01915 Glycosyl hydrolase family 3 C-terminal domain P303_00710 PF07691 PA14 domain P303_00720 PF00728 Glycosyl hydrolase family 20, catalytic domain P303_00720 PF02838 Glycosyl hydrolase family 20, domain 2 P303_00720 PF07691 PA14 domain P303_00725 PF00704 Glycosyl hydrolases family 18 P303_00725 PF01476 LysM domain P303_00730 PF01641 SelR domain P303_00735 PF01266 FAD dependent oxidoreductase P303_00740 PF01168 Alanine racemase, N-terminal domain P303_00740 PF00842 Alanine racemase, C-terminal domain P303_00760 PF01476 LysM domain P303_00760 PF01551 Peptidase family M23 P303_00765 PF09335 SNARE associated Golgi protein P303_00775 PF01975 Survival protein SurE P303_00785 PF01551 Peptidase family M23 P303_00790 PF00561 alpha/beta hydrolase fold P303_00795 PF01053 Cys/Met metabolism PLP-dependent enzyme P303_00800 PF01545 Cation efflux family P303_00805 PF07992 Pyridine nucleotide-disulphide oxidoreductase P303_00805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain P303_00810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) P303_00810 PF00364 Biotin-requiring enzyme P303_00810 PF02817 e3 binding domain P303_00820 PF03180 NLPA lipoprotein P303_00825 PF00528 Binding-protein-dependent transport system inner membrane component P303_00830 PF09383 NIL domain P303_00830 PF00005 ABC transporter P303_00840 PF01522 Polysaccharide deacetylase P303_00850 PF00484 Carbonic anhydrase P303_00860 PF05977 Transmembrane secretion effector P303_00865 PF02657 Fe-S metabolism associated domain P303_00870 PF09190 DALR domain P303_00870 PF01406 tRNA synthetases class I (C) catalytic domain P303_00885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain P303_00885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain P303_00890 PF00764 Arginosuccinate synthase P303_00895 PF07687 Peptidase dimerisation domain P303_00895 PF01546 Peptidase family M20/M25/M40 P303_00900 PF00696 Amino acid kinase family P303_00900 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase P303_00905 PF01118 Semialdehyde dehydrogenase, NAD binding domain P303_00910 PF00206 Lyase P303_00915 PF00696 Amino acid kinase family P303_00915 PF01472 PUA domain P303_00970 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) P303_00970 PF06594 Haemolysin-type calcium binding protein related domain P303_00975 PF14437 MafB19-like deaminase P303_00980 PF02742 Iron dependent repressor, metal binding and dimerisation domain P303_00980 PF01325 Iron dependent repressor, N-terminal DNA binding domain P303_00985 PF01566 Natural resistance-associated macrophage protein P303_00995 PF04376 Arginine-tRNA-protein transferase, N terminus P303_00995 PF04377 Arginine-tRNA-protein transferase, C terminus P303_01015 PF03797 Autotransporter beta-domain P303_01015 PF00082 Subtilase family P303_01015 PF12951 Passenger-associated-transport-repeat P303_01035 PF01553 Acyltransferase P303_01055 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain P303_01055 PF05221 S-adenosyl-L-homocysteine hydrolase P303_01070 PF01351 Ribonuclease HII P303_01075 PF02684 Lipid-A-disaccharide synthetase P303_01080 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 P303_01080 PF00132 Bacterial transferase hexapeptide (six repeats) P303_01085 PF07977 FabA-like domain P303_01090 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD P303_01090 PF00132 Bacterial transferase hexapeptide (six repeats) P303_01095 PF07244 Surface antigen variable number repeat P303_01095 PF01103 Surface antigen P303_01100 PF17820 PDZ domain P303_01100 PF02163 Peptidase family M50 P303_01105 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain P303_01105 PF13288 DXP reductoisomerase C-terminal domain P303_01105 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase P303_01115 PF01255 Putative undecaprenyl diphosphate synthase P303_01120 PF01765 Ribosome recycling factor P303_01125 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) P303_01140 PF00696 Amino acid kinase family P303_01170 PF01081 KDPG and KHG aldolase P303_01175 PF00920 Dehydratase family P303_01180 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase P303_01185 PF02685 Glucokinase P303_01190 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain P303_01190 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain P303_01195 PF17912 MalK OB fold domain P303_01195 PF00005 ABC transporter P303_01200 PF01571 Aminomethyltransferase folate-binding domain P303_01210 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit P303_01215 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit P303_01220 PF02910 Fumarate reductase flavoprotein C-term P303_01220 PF00890 FAD binding domain P303_01225 PF13085 2Fe-2S iron-sulfur cluster binding domain P303_01230 PF03937 Flavinator of succinate dehydrogenase P303_01240 PF02687 FtsX-like permease family P303_01240 PF12704 MacB-like periplasmic core domain P303_01245 PF00005 ABC transporter P303_01250 PF03772 Competence protein P303_01250 PF00753 Metallo-beta-lactamase superfamily P303_01255 PF01618 MotA/TolQ/ExbB proton channel family P303_01265 PF00005 ABC transporter P303_01265 PF00664 ABC transporter transmembrane region P303_01270 PF02606 Tetraacyldisaccharide-1-P 4'-kinase P303_01300 PF04221 RelB antitoxin P303_01375 PF00589 Phage integrase family P303_01375 PF02899 Phage integrase, N-terminal SAM-like domain P303_01390 PF04264 YceI-like domain P303_01395 PF13091 PLD-like domain P303_01410 PF03358 NADPH-dependent FMN reductase P303_01420 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family P303_01420 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain P303_01445 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain P303_01445 PF01367 5'-3' exonuclease, C-terminal SAM fold P303_01445 PF00476 DNA polymerase family A P303_01445 PF01612 3'-5' exonuclease P303_01455 PF05173 Dihydrodipicolinate reductase, C-terminus P303_01455 PF01113 Dihydrodipicolinate reductase, N-terminus P303_01460 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain P303_01460 PF00117 Glutamine amidotransferase class-I P303_01465 PF02142 MGS-like domain P303_01465 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain P303_01465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain P303_01470 PF01272 Transcription elongation factor, GreA/GreB, C-term P303_01470 PF03449 Transcription elongation factor, N-terminal P303_01480 PF01368 DHH family P303_01480 PF02272 DHHA1 domain P303_01480 PF17768 RecJ OB domain P303_01485 PF00472 RF-1 domain P303_01485 PF03462 PCRF domain P303_01490 PF01336 OB-fold nucleic acid binding domain P303_01490 PF00152 tRNA synthetases class II (D, K and N) P303_01495 PF00072 Response regulator receiver domain P303_01500 PF01627 Hpt domain P303_01500 PF00512 His Kinase A (phospho-acceptor) domain P303_01500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P303_01500 PF00072 Response regulator receiver domain P303_01505 PF00378 Enoyl-CoA hydratase/isomerase P303_01510 PF01842 ACT domain P303_01510 PF00696 Amino acid kinase family P303_01520 PF08245 Mur ligase middle domain P303_01530 PF00293 NUDIX domain P303_01535 PF02219 Methylenetetrahydrofolate reductase P303_01545 PF02545 Maf-like protein P303_01550 PF00575 S1 RNA binding domain P303_01550 PF10150 Ribonuclease E/G family P303_01565 PF01523 Putative modulator of DNA gyrase P303_01580 PF01523 Putative modulator of DNA gyrase P303_01585 PF03466 LysR substrate binding domain P303_01585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family P303_01600 PF00107 Zinc-binding dehydrogenase P303_01600 PF08240 Alcohol dehydrogenase GroES-like domain P303_01610 PF00132 Bacterial transferase hexapeptide (six repeats) P303_01610 PF14602 Hexapeptide repeat of succinyl-transferase P303_01610 PF12804 MobA-like NTP transferase domain P303_01620 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain P303_01620 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain P303_01625 PF02874 ATP synthase alpha/beta family, beta-barrel domain P303_01625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain P303_01630 PF00231 ATP synthase P303_01635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain P303_01635 PF00306 ATP synthase alpha/beta chain, C terminal domain P303_01635 PF02874 ATP synthase alpha/beta family, beta-barrel domain P303_01640 PF00213 ATP synthase delta (OSCP) subunit P303_01645 PF00430 ATP synthase B/B' CF(0) P303_01650 PF00137 ATP synthase subunit C P303_01655 PF00119 ATP synthase A chain P303_01670 PF00338 Ribosomal protein S10p/S20e P303_01675 PF00297 Ribosomal protein L3 P303_01680 PF00573 Ribosomal protein L4/L1 family P303_01685 PF00181 Ribosomal Proteins L2, RNA binding domain P303_01685 PF03947 Ribosomal Proteins L2, C-terminal domain P303_01690 PF00203 Ribosomal protein S19 P303_01695 PF00237 Ribosomal protein L22p/L17e P303_01700 PF07650 KH domain P303_01700 PF00189 Ribosomal protein S3, C-terminal domain P303_01705 PF00252 Ribosomal protein L16p/L10e P303_01710 PF00831 Ribosomal L29 protein P303_01715 PF00366 Ribosomal protein S17 P303_01720 PF00238 Ribosomal protein L14p/L23e P303_01725 PF00467 KOW motif P303_01725 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 P303_01730 PF00673 ribosomal L5P family C-terminus P303_01730 PF00281 Ribosomal protein L5 P303_01735 PF00253 Ribosomal protein S14p/S29e P303_01740 PF00410 Ribosomal protein S8 P303_01745 PF00347 Ribosomal protein L6 P303_01750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast P303_01755 PF03719 Ribosomal protein S5, C-terminal domain P303_01755 PF00333 Ribosomal protein S5, N-terminal domain P303_01760 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A P303_01765 PF00344 SecY translocase P303_01770 PF00416 Ribosomal protein S13/S18 P303_01775 PF00411 Ribosomal protein S11 P303_01780 PF01479 S4 domain P303_01780 PF00163 Ribosomal protein S4/S9 N-terminal domain P303_01785 PF01000 RNA polymerase Rpb3/RpoA insert domain P303_01785 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain P303_01785 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain P303_01790 PF01196 Ribosomal protein L17 P303_01795 PF04380 Membrane fusogenic activity P303_01800 PF13335 Magnesium chelatase, subunit ChlI C-terminal P303_01800 PF01078 Magnesium chelatase, subunit ChlI P303_01810 PF00561 alpha/beta hydrolase fold P303_01815 PF03280 Proteobacterial lipase chaperone protein P303_01825 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain P303_01825 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain P303_01825 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain P303_01840 PF05698 Bacterial trigger factor protein (TF) C-terminus P303_01840 PF05697 Bacterial trigger factor protein (TF) P303_01845 PF00574 Clp protease P303_01850 PF10431 C-terminal, D2-small domain, of ClpB protein P303_01850 PF07724 AAA domain (Cdc48 subfamily) P303_01850 PF06689 ClpX C4-type zinc finger P303_01855 PF05362 Lon protease (S16) C-terminal proteolytic domain P303_01855 PF00004 ATPase family associated with various cellular activities (AAA) P303_01855 PF02190 ATP-dependent protease La (LON) substrate-binding domain P303_01860 PF00216 Bacterial DNA-binding protein P303_01885 PF00317 Ribonucleotide reductase, all-alpha domain P303_01885 PF02867 Ribonucleotide reductase, barrel domain P303_01885 PF03477 ATP cone domain P303_01890 PF00268 Ribonucleotide reductase, small chain P303_01905 PF01479 S4 domain P303_01905 PF00849 RNA pseudouridylate synthase P303_01910 PF13419 Haloacid dehalogenase-like hydrolase P303_01925 PF00830 Ribosomal L28 family P303_01930 PF00471 Ribosomal protein L33 P303_01935 PF13091 PLD-like domain P303_01935 PF13396 Phospholipase_D-nuclease N-terminal P303_01945 PF00043 Glutathione S-transferase, C-terminal domain P303_01945 PF02798 Glutathione S-transferase, N-terminal domain P303_01950 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain P303_01950 PF00056 lactate/malate dehydrogenase, NAD binding domain P303_01955 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD P303_01970 PF00529 HlyD membrane-fusion protein of T1SS P303_01970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion P303_01990 PF00005 ABC transporter P303_01990 PF00664 ABC transporter transmembrane region P303_01990 PF03412 Peptidase C39 family P303_01995 PF01061 ABC-2 type transporter P303_02000 PF00005 ABC transporter P303_02005 PF05567 Neisseria PilC beta-propeller domain P303_02020 PF08482 ATP-dependent helicase C-terminal P303_02020 PF00270 DEAD/DEAH box helicase P303_02020 PF04408 Helicase associated domain (HA2) P303_02020 PF00271 Helicase conserved C-terminal domain P303_02030 PF13185 GAF domain P303_02040 PF04357 TamB, inner membrane protein subunit of TAM complex P303_02085 PF00330 Aconitase family (aconitate hydratase) P303_02085 PF00694 Aconitase C-terminal domain P303_02090 PF04303 PrpF protein P303_02125 PF00207 Alpha-2-macroglobulin family P303_02125 PF17962 Bacterial macroglobulin domain 6 P303_02125 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain P303_02125 PF11974 Bacterial alpha-2-macroglobulin MG3 domain P303_02125 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain P303_02125 PF01835 MG2 domain P303_02125 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain P303_02125 PF07703 Alpha-2-macroglobulin bait region domain P303_02135 PF12852 Cupin P303_02135 PF12833 Helix-turn-helix domain P303_02150 PF00929 Exonuclease P303_02155 PF05552 Conserved TM helix P303_02155 PF00924 Mechanosensitive ion channel P303_02160 PF02896 PEP-utilising enzyme, TIM barrel domain P303_02160 PF00391 PEP-utilising enzyme, mobile domain P303_02160 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain P303_02165 PF03618 Kinase/pyrophosphorylase P303_02195 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family P303_02195 PF04055 Radical SAM superfamily P303_02200 PF03099 Biotin/lipoate A/B protein ligase family P303_02205 PF04359 Protein of unknown function (DUF493) P303_02230 PF04286 Protein of unknown function (DUF445) P303_02235 PF01595 Cyclin M transmembrane N-terminal domain P303_02235 PF03471 Transporter associated domain P303_02235 PF00571 CBS domain P303_02255 PF00986 DNA gyrase B subunit, carboxyl terminus P303_02255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P303_02255 PF01751 Toprim domain P303_02255 PF00204 DNA gyrase B P303_02265 PF00117 Glutamine amidotransferase class-I P303_02265 PF06418 CTP synthase N-terminus P303_02270 PF00793 DAHP synthetase I family P303_02275 PF03952 Enolase, N-terminal domain P303_02275 PF00113 Enolase, C-terminal TIM barrel domain P303_02280 PF04977 Septum formation initiator P303_02285 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase P303_02290 PF02542 YgbB family P303_02295 PF01713 Smr domain P303_02320 PF03886 ABC-type transport auxiliary lipoprotein component P303_02320 PF02470 MlaD protein P303_02325 PF00005 ABC transporter P303_02330 PF02405 Permease MlaE P303_02355 PF04085 rod shape-determining protein MreC P303_02360 PF04093 rod shape-determining protein MreD P303_02365 PF00905 Penicillin binding protein transpeptidase domain P303_02365 PF03717 Penicillin-binding Protein dimerisation domain P303_02370 PF01098 Cell cycle protein P303_02375 PF02547 Queuosine biosynthesis protein P303_02380 PF02824 TGS domain P303_02380 PF13291 ACT domain P303_02380 PF04607 Region found in RelA / SpoT proteins P303_02395 PF03776 Septum formation topological specificity factor MinE P303_02400 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain P303_02405 PF05209 Septum formation inhibitor MinC, N-terminal domain P303_02405 PF03775 Septum formation inhibitor MinC, C-terminal domain P303_02425 PF00730 HhH-GPD superfamily base excision DNA repair protein P303_02445 PF04264 YceI-like domain P303_02455 PF00145 C-5 cytosine-specific DNA methylase P303_02460 PF00145 C-5 cytosine-specific DNA methylase P303_02475 PF01208 Uroporphyrinogen decarboxylase (URO-D) P303_02480 PF01761 3-dehydroquinate synthase P303_02485 PF01202 Shikimate kinase P303_02490 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region P303_02490 PF01243 Pyridoxamine 5'-phosphate oxidase P303_02495 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain P303_02495 PF00749 tRNA synthetases class I (E and Q), catalytic domain P303_02500 PF03932 CutC family P303_02520 PF00528 Binding-protein-dependent transport system inner membrane component P303_02525 PF00528 Binding-protein-dependent transport system inner membrane component P303_02530 PF00005 ABC transporter P303_02530 PF12857 TOBE-like domain P303_02545 PF04542 Sigma-70 region 2 P303_02545 PF04546 Sigma-70, non-essential region P303_02545 PF00140 Sigma-70 factor, region 1.2 P303_02545 PF03979 Sigma-70 factor, region 1.1 P303_02545 PF04545 Sigma-70, region 4 P303_02545 PF04539 Sigma-70 region 3 P303_02550 PF00521 DNA gyrase/topoisomerase IV, subunit A P303_02550 PF03989 DNA gyrase C-terminal domain, beta-propeller P303_02555 PF01047 MarR family P303_02560 PF12697 Alpha/beta hydrolase family P303_02565 PF00155 Aminotransferase class I and II P303_02575 PF01040 UbiA prenyltransferase family P303_02585 PF00753 Metallo-beta-lactamase superfamily P303_02590 PF12627 Probable RNA and SrmB- binding site of polymerase A P303_02590 PF01743 Poly A polymerase head domain P303_02590 PF01966 HD domain P303_02595 PF01464 Transglycosylase SLT domain P303_02595 PF14718 Soluble lytic murein transglycosylase L domain P303_02600 PF02666 Phosphatidylserine decarboxylase P303_02605 PF02630 SCO1/SenC P303_02615 PF05175 Methyltransferase small domain P303_02620 PF01264 Chorismate synthase P303_02630 PF01118 Semialdehyde dehydrogenase, NAD binding domain P303_02630 PF02774 Semialdehyde dehydrogenase, dimerisation domain P303_02640 PF01416 tRNA pseudouridine synthase P303_02645 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase P303_02655 PF00291 Pyridoxal-phosphate dependent enzyme P303_02660 PF00290 Tryptophan synthase alpha chain P303_02665 PF18073 Rubredoxin metal binding domain P303_02670 PF00296 Luciferase-like monooxygenase P303_02680 PF00271 Helicase conserved C-terminal domain P303_02680 PF00270 DEAD/DEAH box helicase P303_02680 PF00570 HRDC domain P303_02680 PF16124 RecQ zinc-binding P303_02680 PF09382 RQC domain P303_02685 PF00210 Ferritin-like domain P303_02690 PF11898 Domain of unknown function (DUF3418) P303_02690 PF00270 DEAD/DEAH box helicase P303_02690 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold P303_02690 PF00271 Helicase conserved C-terminal domain P303_02690 PF04408 Helicase associated domain (HA2) P303_02700 PF02347 Glycine cleavage system P-protein P303_02740 PF02498 BRO family, N-terminal domain P303_02740 PF10548 P22AR C-terminal domain P303_02855 PF00959 Phage lysozyme P303_02925 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA P303_02930 PF15723 Motility quorum-sensing regulator, toxin of MqsA P303_02935 PF01381 Helix-turn-helix P303_02965 PF17482 Phage tail sheath C-terminal domain P303_02965 PF04984 Phage tail sheath protein subtilisin-like domain P303_03000 PF03626 Prokaryotic Cytochrome C oxidase subunit IV P303_03005 PF00510 Cytochrome c oxidase subunit III P303_03010 PF00115 Cytochrome C and Quinol oxidase polypeptide I P303_03015 PF06481 COX Aromatic Rich Motif P303_03015 PF00116 Cytochrome C oxidase subunit II, periplasmic domain P303_03020 PF00348 Polyprenyl synthetase P303_03025 PF00436 Single-strand binding protein family P303_03045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily P303_03055 PF03448 MgtE intracellular N domain P303_03055 PF00571 CBS domain P303_03055 PF01769 Divalent cation transporter P303_03065 PF05524 PEP-utilising enzyme, N-terminal P303_03065 PF00391 PEP-utilising enzyme, mobile domain P303_03065 PF02896 PEP-utilising enzyme, TIM barrel domain P303_03070 PF00381 PTS HPr component phosphorylation site P303_03080 PF03668 P-loop ATPase protein family P303_03085 PF07475 HPr Serine kinase C-terminal domain P303_03085 PF02603 HPr Serine kinase N terminus P303_03090 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein P303_03095 PF04552 Sigma-54, DNA binding domain P303_03095 PF04963 Sigma-54 factor, core binding domain P303_03095 PF00309 Sigma-54 factor, Activator interacting domain (AID) P303_03100 PF12399 Branched-chain amino acid ATP-binding cassette transporter P303_03100 PF00005 ABC transporter P303_03120 PF01380 SIS domain P303_03120 PF00571 CBS domain P303_03125 PF01722 BolA-like protein P303_03130 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) P303_03155 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain P303_03155 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal P303_03155 PF02769 AIR synthase related protein, C-terminal domain P303_03160 PF10411 Disulfide bond isomerase protein N-terminus P303_03160 PF13098 Thioredoxin-like domain P303_03165 PF02899 Phage integrase, N-terminal SAM-like domain P303_03165 PF00589 Phage integrase family P303_03170 PF00027 Cyclic nucleotide-binding domain P303_03170 PF00520 Ion transport protein P303_03175 PF00202 Aminotransferase class-III P303_03185 PF04107 Glutamate-cysteine ligase family 2(GCS2) P303_03190 PF01926 50S ribosome-binding GTPase P303_03210 PF01323 DSBA-like thioredoxin domain P303_03215 PF01323 DSBA-like thioredoxin domain P303_03225 PF04356 Protein of unknown function (DUF489) P303_03235 PF00293 NUDIX domain P303_03240 PF02617 ATP-dependent Clp protease adaptor protein ClpS P303_03250 PF00004 ATPase family associated with various cellular activities (AAA) P303_03250 PF02861 Clp amino terminal domain, pathogenicity island component P303_03250 PF10431 C-terminal, D2-small domain, of ClpB protein P303_03250 PF07724 AAA domain (Cdc48 subfamily) P303_03250 PF17871 AAA lid domain P303_03255 PF01176 Translation initiation factor 1A / IF-1 P303_03260 PF03588 Leucyl/phenylalanyl-tRNA protein transferase P303_03270 PF07992 Pyridine nucleotide-disulphide oxidoreductase P303_03275 PF09397 Ftsk gamma domain P303_03275 PF13491 4TM region of DNA translocase FtsK/SpoIIIE P303_03275 PF01580 FtsK/SpoIIIE family P303_03275 PF17854 FtsK alpha domain P303_03285 PF03548 Outer membrane lipoprotein carrier protein LolA P303_03290 PF12002 MgsA AAA+ ATPase C terminal P303_03290 PF16193 AAA C-terminal domain P303_03290 PF00004 ATPase family associated with various cellular activities (AAA) P303_03295 PF02537 CrcB-like protein, Camphor Resistance (CrcB) P303_03300 PF00512 His Kinase A (phospho-acceptor) domain P303_03300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P303_03305 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) P303_03325 PF02685 Glucokinase P303_03335 PF07690 Major Facilitator Superfamily P303_03340 PF00356 Bacterial regulatory proteins, lacI family P303_03345 PF01380 SIS domain P303_03350 PF01979 Amidohydrolase family P303_03355 PF17848 Acetyl-coA carboxylase zinc finger domain P303_03355 PF01039 Carboxyl transferase domain P303_03360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I P303_03360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II P303_03360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III P303_03360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain P303_03365 PF01522 Polysaccharide deacetylase P303_03370 PF13439 Glycosyltransferase Family 4 P303_03370 PF00534 Glycosyl transferases group 1 P303_03380 PF00355 Rieske [2Fe-2S] domain P303_03385 PF00266 Aminotransferase class-V P303_03390 PF01458 Uncharacterized protein family (UPF0051) P303_03395 PF00005 ABC transporter P303_03400 PF01458 Uncharacterized protein family (UPF0051) P303_03405 PF02082 Transcriptional regulator P303_03415 PF00326 Prolyl oligopeptidase family P303_03415 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain P303_03420 PF01678 Diaminopimelate epimerase P303_03430 PF00589 Phage integrase family P303_03430 PF02899 Phage integrase, N-terminal SAM-like domain P303_03435 PF00227 Proteasome subunit P303_03440 PF10431 C-terminal, D2-small domain, of ClpB protein P303_03440 PF00004 ATPase family associated with various cellular activities (AAA) P303_03440 PF07724 AAA domain (Cdc48 subfamily) P303_03450 PF01209 ubiE/COQ5 methyltransferase family P303_03455 PF11838 ERAP1-like C-terminal domain P303_03455 PF01433 Peptidase family M1 domain P303_03480 PF13369 Transglutaminase-like superfamily P303_03500 PF01507 Phosphoadenosine phosphosulfate reductase family P303_03505 PF01077 Nitrite and sulphite reductase 4Fe-4S domain P303_03505 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain P303_03510 PF00175 Oxidoreductase NAD-binding domain P303_03510 PF00258 Flavodoxin P303_03510 PF00667 FAD binding domain P303_03515 PF01507 Phosphoadenosine phosphosulfate reductase family P303_03520 PF00009 Elongation factor Tu GTP binding domain P303_03525 PF01192 RNA polymerase Rpb6 P303_03530 PF00625 Guanylate kinase P303_03535 PF03755 YicC-like family, N-terminal region P303_03535 PF08340 Domain of unknown function (DUF1732) P303_03540 PF03725 3' exoribonuclease family, domain 2 P303_03540 PF01138 3' exoribonuclease family, domain 1 P303_03545 PF01725 Ham1 family P303_03550 PF04055 Radical SAM superfamily P303_03550 PF06969 HemN C-terminal domain P303_03565 PF00561 alpha/beta hydrolase fold P303_03570 PF05175 Methyltransferase small domain P303_03570 PF17827 PrmC N-terminal domain P303_03600 PF05658 Head domain of trimeric autotransporter adhesin P303_03600 PF03895 YadA-like membrane anchor domain P303_03600 PF13018 Extended Signal Peptide of Type V secretion system P303_03600 PF05662 Coiled stalk of trimeric autotransporter adhesin P303_03605 PF00437 Type II/IV secretion system protein P303_03605 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain P303_03610 PF00482 Type II secretion system (T2SS), protein F P303_03620 PF08334 Type II secretion system (T2SS), protein G P303_03625 PF12019 Type II transport protein GspH P303_03630 PF07963 Prokaryotic N-terminal methylation motif P303_03640 PF03934 Type II secretion system (T2SS), protein K P303_03645 PF05137 Fimbrial assembly protein (PilN) P303_03650 PF10741 Type II secretion system (T2SS), protein M subtype b P303_03660 PF00263 Bacterial type II and III secretion system protein P303_03660 PF03958 Bacterial type II/III secretion system short domain P303_03665 PF05662 Coiled stalk of trimeric autotransporter adhesin P303_03665 PF03895 YadA-like membrane anchor domain P303_03665 PF05658 Head domain of trimeric autotransporter adhesin P303_03665 PF13018 Extended Signal Peptide of Type V secretion system P303_03670 PF00578 AhpC/TSA family P303_03670 PF10417 C-terminal domain of 1-Cys peroxiredoxin P303_03675 PF13192 Thioredoxin domain P303_03675 PF07992 Pyridine nucleotide-disulphide oxidoreductase P303_03680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family P303_03680 PF03466 LysR substrate binding domain P303_03685 PF00814 Glycoprotease family P303_03690 PF01197 Ribosomal protein L31 P303_03695 PF00285 Citrate synthase, C-terminal domain P303_03700 PF00380 Ribosomal protein S9/S16 P303_03705 PF00572 Ribosomal protein L13 P303_03710 PF03232 Ubiquinone biosynthesis protein COQ7 P303_03715 PF02675 S-adenosylmethionine decarboxylase P303_03720 PF00325 Bacterial regulatory proteins, crp family P303_03720 PF00027 Cyclic nucleotide-binding domain P303_03740 PF00899 ThiF family P303_03750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain P303_03750 PF07992 Pyridine nucleotide-disulphide oxidoreductase P303_03760 PF02817 e3 binding domain P303_03760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) P303_03760 PF00364 Biotin-requiring enzyme P303_03765 PF00676 Dehydrogenase E1 component P303_03765 PF16078 2-oxoglutarate dehydrogenase N-terminus P303_03765 PF02779 Transketolase, pyrimidine binding domain P303_03765 PF16870 2-oxoglutarate dehydrogenase C-terminal P303_03775 PF08007 Cupin superfamily protein P303_03780 PF08328 Adenylosuccinate lyase C-terminal P303_03780 PF00206 Lyase P303_03785 PF00206 Lyase P303_03785 PF10415 Fumarase C C-terminus P303_03845 PF01134 Glucose inhibited division protein A P303_03845 PF13932 GidA associated domain P303_03875 PF13649 Methyltransferase domain P303_03880 PF02649 Type I GTP cyclohydrolase folE2 P303_03890 PF00873 AcrB/AcrD/AcrF family P303_03895 PF00529 HlyD membrane-fusion protein of T1SS P303_03895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion P303_03900 PF05088 Bacterial NAD-glutamate dehydrogenase P303_03905 PF01513 ATP-NAD kinase P303_03920 PF00239 Resolvase, N terminal domain P303_03920 PF02796 Helix-turn-helix domain of resolvase P303_03930 PF08401 Domain of unknown function (DUF1738) P303_03930 PF18818 Metallopeptidase superfamily domain P303_03930 PF13362 Toprim domain P303_03935 PF00437 Type II/IV secretion system protein P303_03940 PF00437 Type II/IV secretion system protein P303_03945 PF04956 TrbC/VIRB2 family P303_03960 PF03135 CagE, TrbE, VirB family, component of type IV transporter system P303_03970 PF03524 Conjugal transfer protein P303_03980 PF03743 Bacterial conjugation TrbI-like protein P303_04010 PF01797 Transposase IS200 like P303_04025 PF05973 Phage derived protein Gp49-like (DUF891) P303_04060 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH P303_04070 PF02796 Helix-turn-helix domain of resolvase P303_04070 PF00239 Resolvase, N terminal domain P303_04080 PF12706 Beta-lactamase superfamily domain P303_04090 PF00929 Exonuclease P303_04090 PF08411 Exonuclease C-terminal P303_04105 PF00999 Sodium/hydrogen exchanger family P303_04120 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) P303_04130 PF01812 5-formyltetrahydrofolate cyclo-ligase family P303_04135 PF05164 Cell division protein ZapA P303_04145 PF03695 Uncharacterised protein family (UPF0149) P303_04150 PF00557 Metallopeptidase family M24 P303_04150 PF05195 Aminopeptidase P, N-terminal domain P303_04155 PF00293 NUDIX domain P303_04160 PF00881 Nitroreductase family P303_04195 PF01063 Amino-transferase class IV P303_04200 PF02954 Bacterial regulatory protein, Fis family P303_04210 PF01381 Helix-turn-helix P303_04220 PF00535 Glycosyl transferase family 2 P303_04235 PF00925 GTP cyclohydrolase II P303_04245 PF00578 AhpC/TSA family P303_04255 PF00575 S1 RNA binding domain P303_04255 PF00773 RNB domain P303_04255 PF08206 Ribonuclease B OB domain P303_04255 PF08461 Ribonuclease R winged-helix domain P303_04255 PF17876 Cold shock domain P303_04260 PF08032 RNA 2'-O ribose methyltransferase substrate binding P303_04260 PF00588 SpoU rRNA Methylase family P303_04265 PF00589 Phage integrase family P303_04265 PF13356 Arm DNA-binding domain P303_04265 PF14659 Phage integrase, N-terminal SAM-like domain P303_04270 PF00132 Bacterial transferase hexapeptide (six repeats) P303_04275 PF01227 GTP cyclohydrolase I P303_04280 PF05662 Coiled stalk of trimeric autotransporter adhesin P303_04280 PF05658 Head domain of trimeric autotransporter adhesin P303_04280 PF03895 YadA-like membrane anchor domain P303_04285 PF03186 CobD/Cbib protein P303_04290 PF12805 FUSC-like inner membrane protein yccS P303_04295 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain P303_04295 PF02843 Phosphoribosylglycinamide synthetase, C domain P303_04295 PF02844 Phosphoribosylglycinamide synthetase, N domain P303_04300 PF01808 AICARFT/IMPCHase bienzyme P303_04300 PF02142 MGS-like domain P303_04320 PF00588 SpoU rRNA Methylase family P303_04330 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal P303_04330 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III P303_04360 PF00561 alpha/beta hydrolase fold P303_04365 PF03692 Putative zinc- or iron-chelating domain P303_04380 PF02540 NAD synthase P303_04380 PF00795 Carbon-nitrogen hydrolase P303_04385 PF02091 Glycyl-tRNA synthetase alpha subunit P303_04390 PF02092 Glycyl-tRNA synthetase beta subunit P303_04390 PF05746 DALR anticodon binding domain P303_04405 PF02951 Prokaryotic glutathione synthetase, N-terminal domain P303_04405 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain P303_04410 PF00072 Response regulator receiver domain P303_04415 PF01584 CheW-like domain P303_04420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain P303_04420 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term P303_04425 PF01584 CheW-like domain P303_04425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P303_04425 PF00072 Response regulator receiver domain P303_04425 PF01627 Hpt domain P303_04440 PF00156 Phosphoribosyl transferase domain P303_04455 PF02875 Mur ligase family, glutamate ligase domain P303_04455 PF08245 Mur ligase middle domain P303_04465 PF01432 Peptidase family M3 P303_04480 PF01625 Peptide methionine sulfoxide reductase P303_04490 PF00375 Sodium:dicarboxylate symporter family P303_04500 PF02527 rRNA small subunit methyltransferase G P303_04505 PF01648 4'-phosphopantetheinyl transferase superfamily P303_04515 PF13700 Domain of unknown function (DUF4158) P303_04515 PF01526 Tn3 transposase DDE domain P303_04525 PF01526 Tn3 transposase DDE domain P303_04525 PF13700 Domain of unknown function (DUF4158) P303_04560 PF02445 Quinolinate synthetase A protein P303_04565 PF02777 Iron/manganese superoxide dismutases, C-terminal domain P303_04565 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain P303_04570 PF01371 Trp repressor protein P303_04605 PF00117 Glutamine amidotransferase class-I P303_04610 PF04715 Anthranilate synthase component I, N terminal region P303_04610 PF00425 chorismate binding enzyme P303_04615 PF01026 TatD related DNase P303_04635 PF02881 SRP54-type protein, helical bundle domain P303_04635 PF00448 SRP54-type protein, GTPase domain P303_04640 PF14815 NUDIX domain P303_04640 PF00633 Helix-hairpin-helix motif P303_04640 PF00730 HhH-GPD superfamily base excision DNA repair protein P303_04645 PF04362 Bacterial Fe(2+) trafficking P303_04650 PF01709 Transcriptional regulator P303_04655 PF02075 Crossover junction endodeoxyribonuclease RuvC P303_04660 PF01330 RuvA N terminal domain P303_04660 PF07499 RuvA, C-terminal domain P303_04665 PF02705 K+ potassium transporter P303_04670 PF17864 RuvB AAA lid domain P303_04670 PF05491 RuvB C-terminal winged helix domain P303_04670 PF05496 Holliday junction DNA helicase RuvB P-loop domain P303_04675 PF03061 Thioesterase superfamily P303_04680 PF01618 MotA/TolQ/ExbB proton channel family P303_04685 PF02472 Biopolymer transport protein ExbD/TolR P303_04695 PF07676 WD40-like Beta Propeller Repeat P303_04695 PF04052 TolB amino-terminal domain P303_04700 PF00691 OmpA family P303_04710 PF04055 Radical SAM superfamily P303_04715 PF00300 Histidine phosphatase superfamily (branch 1) P303_04720 PF04493 Endonuclease V P303_04725 PF00854 POT family P303_04730 PF00255 Glutathione peroxidase P303_04735 PF00970 Oxidoreductase FAD-binding domain P303_04735 PF00175 Oxidoreductase NAD-binding domain P303_04740 PF01964 Radical SAM ThiC family P303_04740 PF13667 ThiC-associated domain P303_04745 PF10459 Peptidase S46 P303_04750 PF00300 Histidine phosphatase superfamily (branch 1) P303_04975 PF06508 Queuosine biosynthesis protein QueC P303_04980 PF02938 GAD domain P303_04980 PF00152 tRNA synthetases class II (D, K and N) P303_04980 PF01336 OB-fold nucleic acid binding domain P303_04985 PF05683 Fumarase C-terminus P303_04985 PF05681 Fumarate hydratase (Fumerase) P303_04995 PF03797 Autotransporter beta-domain P303_04995 PF12951 Passenger-associated-transport-repeat P303_04995 PF00082 Subtilase family P303_05020 PF00512 His Kinase A (phospho-acceptor) domain P303_05020 PF00989 PAS fold P303_05020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P303_05025 PF00158 Sigma-54 interaction domain P303_05025 PF02954 Bacterial regulatory protein, Fis family P303_05025 PF00072 Response regulator receiver domain P303_05030 PF01526 Tn3 transposase DDE domain P303_05030 PF13700 Domain of unknown function (DUF4158) P303_05040 PF01751 Toprim domain P303_05040 PF01131 DNA topoisomerase P303_05045 PF00909 Ammonium Transporter Family P303_05050 PF00543 Nitrogen regulatory protein P-II P303_05055 PF03951 Glutamine synthetase, beta-Grasp domain P303_05055 PF00120 Glutamine synthetase, catalytic domain P303_05065 PF04264 YceI-like domain P303_05205 PF02498 BRO family, N-terminal domain P303_05205 PF10548 P22AR C-terminal domain P303_05280 PF10548 P22AR C-terminal domain P303_05280 PF02498 BRO family, N-terminal domain P303_05315 PF02899 Phage integrase, N-terminal SAM-like domain P303_05315 PF00589 Phage integrase family P303_05320 PF03706 Lysylphosphatidylglycerol synthase TM region P303_05320 PF09924 Uncharacterised conserved protein (DUF2156) P303_05335 PF00109 Beta-ketoacyl synthase, N-terminal domain P303_05335 PF02801 Beta-ketoacyl synthase, C-terminal domain P303_05345 PF00535 Glycosyl transferase family 2 P303_05360 PF00437 Type II/IV secretion system protein P303_05365 PF00437 Type II/IV secretion system protein P303_05380 PF03900 Porphobilinogen deaminase, C-terminal domain P303_05380 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain P303_05385 PF04397 LytTr DNA-binding domain P303_05385 PF00072 Response regulator receiver domain P303_05390 PF07694 5TMR of 5TMR-LYT P303_05390 PF06580 Histidine kinase P303_05395 PF02230 Phospholipase/Carboxylesterase P303_05400 PF13632 Glycosyl transferase family group 2 P303_05420 PF01209 ubiE/COQ5 methyltransferase family P303_05445 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family P303_05450 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family P303_05470 PF07690 Major Facilitator Superfamily P303_05480 PF04102 SlyX P303_05485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain P303_05485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain P303_05485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain P303_05490 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase P303_05490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase P303_05500 PF00255 Glutathione peroxidase P303_05505 PF00005 ABC transporter P303_05535 PF05016 ParE toxin of type II toxin-antitoxin system, parDE P303_05540 PF09386 Antitoxin ParD P303_05585 PF10876 Phage tail assemb.y chaperone protein, TAC P303_05645 PF02899 Phage integrase, N-terminal SAM-like domain P303_05645 PF00589 Phage integrase family P303_05650 PF00005 ABC transporter P303_05650 PF12848 ABC transporter P303_05655 PF00593 TonB dependent receptor P303_05655 PF07715 TonB-dependent Receptor Plug Domain P303_05665 PF07715 TonB-dependent Receptor Plug Domain P303_05665 PF00593 TonB dependent receptor P303_05670 PF00999 Sodium/hydrogen exchanger family P303_05670 PF02254 TrkA-N domain P303_05675 PF12849 PBP superfamily domain P303_05680 PF00528 Binding-protein-dependent transport system inner membrane component P303_05685 PF00528 Binding-protein-dependent transport system inner membrane component P303_05690 PF00005 ABC transporter P303_05695 PF01895 PhoU domain P303_05700 PF00929 Exonuclease P303_05705 PF00398 Ribosomal RNA adenine dimethylase P303_05710 PF04379 ApaG domain P303_05715 PF00149 Calcineurin-like phosphoesterase P303_05735 PF01075 Glycosyltransferase family 9 (heptosyltransferase) P303_05755 PF00929 Exonuclease P303_05760 PF00075 RNase H P303_05770 PF16123 Hydroxyacylglutathione hydrolase C-terminus P303_05770 PF00753 Metallo-beta-lactamase superfamily P303_05780 PF17674 HHH domain P303_05780 PF00575 S1 RNA binding domain P303_05780 PF09371 Tex-like protein N-terminal domain P303_05780 PF16921 Tex protein YqgF-like domain P303_05795 PF00719 Inorganic pyrophosphatase P303_05805 PF00085 Thioredoxin P303_05815 PF13603 Leucyl-tRNA synthetase, Domain 2 P303_05815 PF00133 tRNA synthetases class I (I, L, M and V) P303_05815 PF08264 Anticodon-binding domain of tRNA P303_05850 PF13406 Transglycosylase SLT domain P303_05855 PF05036 Sporulation related domain P303_05855 PF03330 Lytic transglycolase P303_05900 PF05860 haemagglutination activity domain P303_05900 PF13332 Hemagglutinin repeat P303_05900 PF04829 Pre-toxin domain with VENN motif P303_05905 PF04829 Pre-toxin domain with VENN motif P303_05905 PF13332 Hemagglutinin repeat P303_05905 PF05860 haemagglutination activity domain P303_05905 PF13018 Extended Signal Peptide of Type V secretion system P303_05940 PF01132 Elongation factor P (EF-P) OB domain P303_05940 PF08207 Elongation factor P (EF-P) KOW-like domain P303_05940 PF09285 Elongation factor P, C-terminal P303_05945 PF01565 FAD binding domain P303_05945 PF02913 FAD linked oxidases, C-terminal domain P303_05950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain P303_05950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain P303_05950 PF01842 ACT domain P303_05955 PF13520 Amino acid permease P303_05960 PF13520 Amino acid permease P303_05965 PF00596 Class II Aldolase and Adducin N-terminal domain P303_05970 PF03079 ARD/ARD' family P303_05980 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase P303_05980 PF01502 Phosphoribosyl-AMP cyclohydrolase P303_05985 PF00977 Histidine biosynthesis protein P303_05990 PF00977 Histidine biosynthesis protein P303_05995 PF00117 Glutamine amidotransferase class-I P303_06000 PF00475 Imidazoleglycerol-phosphate dehydratase P303_06005 PF00155 Aminotransferase class I and II P303_06010 PF00815 Histidinol dehydrogenase P303_06015 PF08029 HisG, C-terminal domain P303_06015 PF01634 ATP phosphoribosyltransferase P303_06025 PF03129 Anticodon binding domain P303_06025 PF13393 Histidyl-tRNA synthetase P303_06030 PF00291 Pyridoxal-phosphate dependent enzyme P303_06030 PF14821 Threonine synthase N terminus P303_06035 PF00288 GHMP kinases N terminal domain P303_06035 PF08544 GHMP kinases C terminal P303_06040 PF13840 ACT domain P303_06040 PF03447 Homoserine dehydrogenase, NAD binding domain P303_06040 PF00742 Homoserine dehydrogenase P303_06040 PF01842 ACT domain P303_06040 PF00696 Amino acid kinase family P303_06045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain P303_06045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain P303_06050 PF03652 Holliday junction resolvase P303_06055 PF02622 Uncharacterized ACR, COG1678 P303_06060 PF00768 D-alanyl-D-alanine carboxypeptidase P303_06060 PF07943 Penicillin-binding protein 5, C-terminal domain P303_06070 PF00141 Peroxidase P303_06075 PF01556 DnaJ C terminal domain P303_06075 PF00226 DnaJ domain P303_06085 PF00905 Penicillin binding protein transpeptidase domain P303_06085 PF00912 Transglycosylase P303_06085 PF06832 Penicillin-Binding Protein C-terminus Family P303_06095 PF07715 TonB-dependent Receptor Plug Domain P303_06095 PF00593 TonB dependent receptor P303_06110 PF08281 Sigma-70, region 4 P303_06110 PF04542 Sigma-70 region 2 P303_06120 PF13180 PDZ domain P303_06125 PF03144 Elongation factor Tu domain 2 P303_06125 PF00009 Elongation factor Tu GTP binding domain P303_06125 PF06421 GTP-binding protein LepA C-terminus P303_06125 PF00679 Elongation factor G C-terminus P303_06130 PF10502 Signal peptidase, peptidase S26 P303_06140 PF14622 Ribonuclease-III-like P303_06140 PF00035 Double-stranded RNA binding motif P303_06145 PF01926 50S ribosome-binding GTPase P303_06145 PF07650 KH domain P303_06150 PF11967 Recombination protein O N terminal P303_06150 PF02565 Recombination protein O C terminal P303_06155 PF02780 Transketolase, C-terminal domain P303_06155 PF02779 Transketolase, pyrimidine binding domain P303_06155 PF13292 1-deoxy-D-xylulose-5-phosphate synthase P303_06160 PF00474 Sodium:solute symporter family P303_06170 PF16177 Acetyl-coenzyme A synthetase N-terminus P303_06170 PF00501 AMP-binding enzyme P303_06170 PF13193 AMP-binding enzyme C-terminal domain P303_06175 PF02659 Putative manganese efflux pump P303_06185 PF13360 PQQ-like domain P303_06190 PF00326 Prolyl oligopeptidase family P303_06190 PF07676 WD40-like Beta Propeller Repeat P303_06190 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region P303_06195 PF03169 OPT oligopeptide transporter protein P303_06215 PF16901 C-terminal domain of alpha-glycerophosphate oxidase P303_06215 PF01266 FAD dependent oxidoreductase P303_06220 PF00230 Major intrinsic protein P303_06225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain P303_06225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain P303_06235 PF01263 Aldose 1-epimerase P303_06240 PF08267 Cobalamin-independent synthase, N-terminal domain P303_06240 PF01717 Cobalamin-independent synthase, Catalytic domain P303_06245 PF02677 Epoxyqueuosine reductase QueH P303_06250 PF00857 Isochorismatase family P303_06255 PF00501 AMP-binding enzyme P303_06265 PF00535 Glycosyl transferase family 2 P303_06270 PF01370 NAD dependent epimerase/dehydratase family P303_06275 PF17762 HTH domain found in ParB protein P303_06275 PF02195 ParB-like nuclease domain P303_06280 PF13614 AAA domain P303_06290 PF02403 Seryl-tRNA synthetase N-terminal domain P303_06290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) P303_06295 PF03544 Gram-negative bacterial TonB protein C-terminal P303_06325 PF01555 DNA methylase P303_06335 PF01541 GIY-YIG catalytic domain P303_06335 PF02151 UvrB/uvrC motif P303_06335 PF08459 UvrC Helix-hairpin-helix N-terminal P303_06340 PF01066 CDP-alcohol phosphatidyltransferase P303_06360 PF00490 Delta-aminolevulinic acid dehydratase P303_06365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily P303_06375 PF13610 DDE domain P303_06385 PF00202 Aminotransferase class-III P303_06390 PF10609 NUBPL iron-transfer P-loop NTPase P303_06395 PF02348 Cytidylyltransferase P303_06400 PF01451 Low molecular weight phosphotyrosine protein phosphatase P303_06495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) P303_06500 PF01842 ACT domain P303_06500 PF00800 Prephenate dehydratase P303_06500 PF01817 Chorismate mutase type II P303_06505 PF00266 Aminotransferase class-V P303_06515 PF12679 ABC-2 family transporter protein P303_06520 PF00005 ABC transporter P303_06530 PF00186 Dihydrofolate reductase P303_06535 PF00303 Thymidylate synthase P303_06540 PF01790 Prolipoprotein diacylglyceryl transferase P303_06545 PF01219 Prokaryotic diacylglycerol kinase P303_06550 PF00486 Transcriptional regulatory protein, C terminal P303_06550 PF00072 Response regulator receiver domain P303_06555 PF01817 Chorismate mutase type II P303_06555 PF02153 Prephenate dehydrogenase P303_06560 PF00226 DnaJ domain P303_06560 PF01556 DnaJ C terminal domain P303_06560 PF00684 DnaJ central domain P303_06565 PF00012 Hsp70 protein P303_06570 PF01025 GrpE P303_06575 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding P303_06575 PF01628 HrcA protein C terminal domain P303_06580 PF13476 AAA domain P303_06580 PF02463 RecF/RecN/SMC N terminal domain P303_06585 PF01475 Ferric uptake regulator family P303_06590 PF04355 SmpA / OmlA family P303_06595 PF03658 RnfH family Ubiquitin P303_06605 PF01668 SmpB protein P303_06615 PF00313 'Cold-shock' DNA-binding domain P303_06620 PF01048 Phosphorylase superfamily P303_06630 PF00933 Glycosyl hydrolase family 3 N terminal domain P303_06650 PF03808 Glycosyl transferase WecB/TagA/CpsF family P303_06660 PF14667 Polysaccharide biosynthesis C-terminal domain P303_06670 PF13439 Glycosyltransferase Family 4 P303_06670 PF00534 Glycosyl transferases group 1 P303_06685 PF02397 Bacterial sugar transferase P303_06700 PF00180 Isocitrate/isopropylmalate dehydrogenase P303_06705 PF00694 Aconitase C-terminal domain P303_06710 PF00330 Aconitase family (aconitate hydratase) P303_06735 PF14489 QueF-like protein P303_06735 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term P303_06740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion P303_06745 PF00873 AcrB/AcrD/AcrF family P303_06750 PF00873 AcrB/AcrD/AcrF family P303_06760 PF08240 Alcohol dehydrogenase GroES-like domain P303_06760 PF00107 Zinc-binding dehydrogenase P303_06785 PF00462 Glutaredoxin P303_06790 PF01522 Polysaccharide deacetylase P303_06795 PF00155 Aminotransferase class I and II P303_06800 PF03412 Peptidase C39 family P303_06800 PF00664 ABC transporter transmembrane region P303_06800 PF00005 ABC transporter P303_06855 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) P303_06855 PF06594 Haemolysin-type calcium binding protein related domain P303_06870 PF13087 AAA domain P303_06870 PF13091 PLD-like domain P303_06885 PF13166 AAA domain P303_06915 PF02401 LytB protein P303_06920 PF01252 Signal peptidase (SPase) II P303_06925 PF06827 Zinc finger found in FPG and IleRS P303_06925 PF08264 Anticodon-binding domain of tRNA P303_06925 PF00133 tRNA synthetases class I (I, L, M and V) P303_06930 PF01687 Riboflavin kinase P303_06930 PF06574 FAD synthetase P303_06935 PF03023 Lipid II flippase MurJ P303_06940 PF01649 Ribosomal protein S20 P303_06945 PF01018 GTP1/OBG P303_06945 PF01926 50S ribosome-binding GTPase P303_06950 PF01016 Ribosomal L27 protein P303_06955 PF00829 Ribosomal prokaryotic L21 protein P303_06975 PF02540 NAD synthase P303_06975 PF00117 Glutamine amidotransferase class-I P303_06975 PF00958 GMP synthase C terminal domain P303_06980 PF00571 CBS domain P303_06980 PF00478 IMP dehydrogenase / GMP reductase domain P303_06985 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain P303_06985 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain P303_06990 PF00483 Nucleotidyl transferase P303_06995 PF02719 Polysaccharide biosynthesis protein P303_07000 PF00953 Glycosyl transferase family 4 P303_07005 PF18073 Rubredoxin metal binding domain P303_07015 PF00216 Bacterial DNA-binding protein P303_07020 PF00575 S1 RNA binding domain P303_07025 PF02224 Cytidylate kinase P303_07030 PF00444 Ribosomal protein L36 P303_07040 PF04371 Porphyromonas-type peptidyl-arginine deiminase P303_07045 PF00795 Carbon-nitrogen hydrolase P303_07060 PF00528 Binding-protein-dependent transport system inner membrane component P303_07065 PF00528 Binding-protein-dependent transport system inner membrane component P303_07085 PF02616 Segregation and condensation protein ScpA P303_07090 PF04079 Segregation and condensation complex subunit ScpB P303_07095 PF01479 S4 domain P303_07095 PF00849 RNA pseudouridylate synthase P303_07105 PF00795 Carbon-nitrogen hydrolase P303_07110 PF00155 Aminotransferase class I and II P303_07115 PF00005 ABC transporter P303_07120 PF03379 CcmB protein P303_07125 PF01578 Cytochrome C assembly protein P303_07135 PF03100 CcmE P303_07140 PF01578 Cytochrome C assembly protein P303_07140 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal P303_07145 PF08534 Redoxin P303_07150 PF03918 Cytochrome C biogenesis protein P303_07165 PF00561 alpha/beta hydrolase fold P303_07170 PF00295 Glycosyl hydrolases family 28 P303_07180 PF13419 Haloacid dehalogenase-like hydrolase P303_07190 PF01979 Amidohydrolase family P303_07195 PF08207 Elongation factor P (EF-P) KOW-like domain P303_07195 PF09285 Elongation factor P, C-terminal P303_07195 PF01132 Elongation factor P (EF-P) OB domain P303_07200 PF04055 Radical SAM superfamily P303_07205 PF00588 SpoU rRNA Methylase family P303_07210 PF00459 Inositol monophosphatase family P303_07235 PF09115 DNA polymerase III, delta subunit, C terminal P303_07240 PF02618 YceG-like family P303_07245 PF00425 chorismate binding enzyme P303_07245 PF04715 Anthranilate synthase component I, N terminal region P303_07250 PF02801 Beta-ketoacyl synthase, C-terminal domain P303_07250 PF00109 Beta-ketoacyl synthase, N-terminal domain P303_07255 PF00550 Phosphopantetheine attachment site P303_07265 PF00698 Acyl transferase domain P303_07270 PF00456 Transketolase, thiamine diphosphate binding domain P303_07270 PF17831 Pyruvate dehydrogenase E1 component middle domain P303_07275 PF06594 Haemolysin-type calcium binding protein related domain P303_07275 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) P303_07305 PF00348 Polyprenyl synthetase P303_07310 PF02609 Exonuclease VII small subunit P303_07315 PF09179 TilS substrate binding domain P303_07315 PF11734 TilS substrate C-terminal domain P303_07315 PF01171 PP-loop family P303_07320 PF00245 Alkaline phosphatase P303_07325 PF00375 Sodium:dicarboxylate symporter family P303_07335 PF00877 NlpC/P60 family P303_07345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase P303_07350 PF04235 Protein of unknown function (DUF418) P303_07365 PF10576 Iron-sulfur binding domain of endonuclease III P303_07365 PF00730 HhH-GPD superfamily base excision DNA repair protein P303_07365 PF00633 Helix-hairpin-helix motif P303_07375 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase P303_07375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase P303_07410 PF18317 Shikimate 5'-dehydrogenase C-terminal domain P303_07410 PF08501 Shikimate dehydrogenase substrate binding domain P303_07410 PF01488 Shikimate / quinate 5-dehydrogenase P303_07425 PF08543 Phosphomethylpyrimidine kinase P303_07425 PF02581 Thiamine monophosphate synthase P303_07430 PF02683 Cytochrome C biogenesis protein transmembrane region P303_07430 PF11412 Disulphide bond corrector protein DsbC P303_07435 PF03091 CutA1 divalent ion tolerance protein P303_07440 PF00166 Chaperonin 10 Kd subunit P303_07445 PF00118 TCP-1/cpn60 chaperonin family P303_07470 PF01370 NAD dependent epimerase/dehydratase family P303_07475 PF01370 NAD dependent epimerase/dehydratase family P303_07480 PF16363 GDP-mannose 4,6 dehydratase P303_07495 PF00291 Pyridoxal-phosphate dependent enzyme P303_07515 PF00593 TonB dependent receptor P303_07515 PF07715 TonB-dependent Receptor Plug Domain P303_07520 PF13640 2OG-Fe(II) oxygenase superfamily P303_07520 PF18331 PKHD-type hydroxylase C-terminal domain P303_07540 PF02424 ApbE family P303_07555 PF01636 Phosphotransferase enzyme family P303_07560 PF00483 Nucleotidyl transferase P303_07565 PF00308 Bacterial dnaA protein P303_07570 PF01594 AI-2E family transporter P303_07580 PF00586 AIR synthase related protein, N-terminal domain P303_07580 PF02769 AIR synthase related protein, C-terminal domain P303_07585 PF00551 Formyl transferase P303_07605 PF02223 Thymidylate kinase P303_07615 PF01431 Peptidase family M13 P303_07615 PF05649 Peptidase family M13 P303_07625 PF07977 FabA-like domain P303_07635 PF01171 PP-loop family P303_07640 PF04381 Putative exonuclease, RdgC P303_07650 PF00762 Ferrochelatase P303_07660 PF02416 mttA/Hcf106 family P303_07665 PF02416 mttA/Hcf106 family P303_07670 PF00902 Sec-independent protein translocase protein (TatC) P303_07685 PF00958 GMP synthase C terminal domain P303_07685 PF00117 Glutamine amidotransferase class-I P303_07700 PF00127 Copper binding proteins, plastocyanin/azurin family P303_07705 PF03193 RsgA GTPase P303_07715 PF02021 Uncharacterised protein family UPF0102 P303_07720 PF04348 LppC putative lipoprotein P303_07725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases P303_07730 PF00593 TonB dependent receptor P303_07730 PF07715 TonB-dependent Receptor Plug Domain P303_07735 PF09334 tRNA synthetases class I (M) P303_07735 PF01588 Putative tRNA binding domain P303_07740 PF04060 Putative Fe-S cluster P303_07795 PF08275 DNA primase catalytic core, N-terminal domain P303_07795 PF01807 CHC2 zinc finger P303_07825 PF00436 Single-strand binding protein family P303_07945 PF09931 Uncharacterized conserved protein (DUF2163) P303_07945 PF09356 Phage conserved hypothetical protein BR0599 P303_07995 PF00959 Phage lysozyme P303_08015 PF00574 Clp protease P303_08045 PF01807 CHC2 zinc finger P303_08045 PF08275 DNA primase catalytic core, N-terminal domain P303_08075 PF00436 Single-strand binding protein family P303_08125 PF00114 Pilin (bacterial filament) P303_08125 PF07963 Prokaryotic N-terminal methylation motif P303_08130 PF05567 Neisseria PilC beta-propeller domain P303_08150 PF00114 Pilin (bacterial filament) P303_08150 PF07963 Prokaryotic N-terminal methylation motif P303_08155 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases P303_08155 PF03641 Possible lysine decarboxylase P303_08155 PF11892 Domain of unknown function (DUF3412) P303_08160 PF00563 EAL domain P303_08160 PF12792 CSS motif domain associated with EAL P303_08165 PF00899 ThiF family P303_08175 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal P303_08175 PF01926 50S ribosome-binding GTPase P303_08180 PF01011 PQQ enzyme repeat P303_08180 PF13360 PQQ-like domain P303_08200 PF04055 Radical SAM superfamily P303_08205 PF00334 Nucleoside diphosphate kinase P303_08210 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain P303_08210 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain P303_08215 PF00709 Adenylosuccinate synthetase P303_08225 PF01145 SPFH domain / Band 7 family P303_08230 PF12221 Bacterial membrane protein N terminal P303_08230 PF01145 SPFH domain / Band 7 family P303_08235 PF00107 Zinc-binding dehydrogenase P303_08235 PF08240 Alcohol dehydrogenase GroES-like domain P303_08240 PF00072 Response regulator receiver domain P303_08255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) P303_08255 PF04073 Aminoacyl-tRNA editing domain P303_08255 PF03129 Anticodon binding domain P303_08265 PF01066 CDP-alcohol phosphatidyltransferase P303_08280 PF14310 Fibronectin type III-like domain P303_08280 PF00933 Glycosyl hydrolase family 3 N terminal domain P303_08280 PF01915 Glycosyl hydrolase family 3 C-terminal domain P303_08285 PF00924 Mechanosensitive ion channel P303_08290 PF02152 Dihydroneopterin aldolase P303_08295 PF00814 Glycoprotease family P303_08300 PF01165 Ribosomal protein S21 P303_08305 PF09424 Yqey-like protein P303_08310 PF03631 Virulence factor BrkB P303_08315 PF01807 CHC2 zinc finger P303_08315 PF10410 DnaB-helicase binding domain of primase P303_08315 PF08278 DNA primase DnaG DnaB-binding P303_08315 PF08275 DNA primase catalytic core, N-terminal domain P303_08335 PF00579 tRNA synthetases class I (W and Y) P303_08345 PF13538 UvrD-like helicase C-terminal domain P303_08355 PF13361 UvrD-like helicase C-terminal domain P303_08355 PF00580 UvrD/REP helicase N-terminal domain P303_08355 PF12705 PD-(D/E)XK nuclease superfamily P303_08360 PF17946 RecC C-terminal domain P303_08365 PF00005 ABC transporter P303_08370 PF02405 Permease MlaE P303_08380 PF05494 MlaC protein P303_08390 PF04333 MlaA lipoprotein P303_08400 PF02646 RmuC family P303_08405 PF00005 ABC transporter P303_08425 PF13520 Amino acid permease P303_08435 PF17785 PUA-like domain P303_08435 PF10672 S-adenosylmethionine-dependent methyltransferase P303_08440 PF03741 Integral membrane protein TerC family P303_08445 PF01521 Iron-sulphur cluster biosynthesis P303_08460 PF00486 Transcriptional regulatory protein, C terminal P303_08460 PF00072 Response regulator receiver domain P303_08475 PF00210 Ferritin-like domain P303_08485 PF00293 NUDIX domain P303_08500 PF00438 S-adenosylmethionine synthetase, N-terminal domain P303_08500 PF02772 S-adenosylmethionine synthetase, central domain P303_08500 PF02773 S-adenosylmethionine synthetase, C-terminal domain P303_08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P303_08510 PF08918 PhoQ Sensor P303_08515 PF00072 Response regulator receiver domain P303_08515 PF00486 Transcriptional regulatory protein, C terminal P303_08525 PF01207 Dihydrouridine synthase (Dus) P303_08530 PF00593 TonB dependent receptor P303_08530 PF07715 TonB-dependent Receptor Plug Domain P303_08545 PF07724 AAA domain (Cdc48 subfamily) P303_08545 PF17871 AAA lid domain P303_08545 PF02861 Clp amino terminal domain, pathogenicity island component P303_08545 PF10431 C-terminal, D2-small domain, of ClpB protein P303_08545 PF00004 ATPase family associated with various cellular activities (AAA) P303_08550 PF00301 Rubredoxin P303_08555 PF02581 Thiamine monophosphate synthase P303_08560 PF00067 Cytochrome P450 P303_08565 PF08019 Phosphoethanolamine transferase EptA/EptB P303_08565 PF00884 Sulfatase P303_08575 PF07660 Secretin and TonB N terminus short domain P303_08575 PF03958 Bacterial type II/III secretion system short domain P303_08575 PF00263 Bacterial type II and III secretion system protein P303_08575 PF11741 AMIN domain P303_08600 PF00912 Transglycosylase P303_08600 PF00905 Penicillin binding protein transpeptidase domain P303_08600 PF17092 Penicillin-binding protein OB-like domain P303_08605 PF00248 Aldo/keto reductase family P303_08610 PF00294 pfkB family carbohydrate kinase P303_08615 PF05736 OprF membrane domain P303_08615 PF00691 OmpA family P303_08620 PF00772 DnaB-like helicase N terminal domain P303_08620 PF03796 DnaB-like helicase C terminal domain P303_08635 PF00067 Cytochrome P450 P303_08640 PF00270 DEAD/DEAH box helicase P303_08640 PF17191 RecG wedge domain P303_08640 PF00271 Helicase conserved C-terminal domain P303_08645 PF01042 Endoribonuclease L-PSP P303_08650 PF04607 Region found in RelA / SpoT proteins P303_08650 PF02824 TGS domain P303_08650 PF13291 ACT domain P303_08655 PF01565 FAD binding domain P303_08655 PF02913 FAD linked oxidases, C-terminal domain P303_08670 PF05736 OprF membrane domain P303_08670 PF00691 OmpA family P303_08685 PF02600 Disulfide bond formation protein DsbB P303_08690 PF07715 TonB-dependent Receptor Plug Domain P303_08690 PF00593 TonB dependent receptor P303_08695 PF02590 Predicted SPOUT methyltransferase P303_08735 PF05973 Phage derived protein Gp49-like (DUF891) P303_08740 PF01381 Helix-turn-helix P303_08770 PF05973 Phage derived protein Gp49-like (DUF891) P303_08775 PF01381 Helix-turn-helix P303_08785 PF10876 Phage tail assemb.y chaperone protein, TAC P303_08840 PF04233 Phage Mu protein F like protein P303_08860 PF14659 Phage integrase, N-terminal SAM-like domain P303_08860 PF00589 Phage integrase family P303_08860 PF13356 Arm DNA-binding domain P303_08865 PF06381 Protein of unknown function (DUF1073) P303_08895 PF00959 Phage lysozyme P303_08920 PF03796 DnaB-like helicase C terminal domain P303_08920 PF00772 DnaB-like helicase N terminal domain P303_08935 PF10548 P22AR C-terminal domain P303_08935 PF02498 BRO family, N-terminal domain P303_08975 PF18495 Antitoxin VbhA P303_09060 PF00589 Phage integrase family P303_09060 PF02899 Phage integrase, N-terminal SAM-like domain P303_09075 PF12241 Trans-2-enoyl-CoA reductase catalytic region P303_09075 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase P303_09075 PF07055 Enoyl reductase FAD binding domain P303_09085 PF03109 ABC1 family P303_09095 PF00551 Formyl transferase P303_09100 PF02492 CobW/HypB/UreG, nucleotide-binding domain P303_09100 PF07683 Cobalamin synthesis protein cobW C-terminal domain P303_09110 PF03969 AFG1-like ATPase P303_09115 PF02566 OsmC-like protein P303_09120 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family P303_09125 PF17804 Tail specific protease N-terminal domain P303_09125 PF03572 Peptidase family S41 P303_09125 PF00595 PDZ domain P303_09125 PF11818 C-terminal domain of tail specific protease (DUF3340) P303_09130 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain P303_09130 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain P303_09135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain P303_09135 PF00205 Thiamine pyrophosphate enzyme, central domain P303_09135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain P303_09145 PF00291 Pyridoxal-phosphate dependent enzyme P303_09150 PF00682 HMGL-like P303_09150 PF08502 LeuA allosteric (dimerisation) domain P303_09160 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III P303_09160 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal P303_09165 PF01783 Ribosomal L32p protein family P303_09170 PF02620 Large ribosomal RNA subunit accumulation protein YceD P303_09180 PF17863 AAA lid domain P303_09180 PF07726 ATPase family associated with various cellular activities (AAA) P303_09190 PF13559 Domain of unknown function (DUF4129) P303_09190 PF01841 Transglutaminase-like superfamily P303_09190 PF11992 Domain of unknown function (DUF3488) P303_09200 PF01230 HIT domain P303_09205 PF02132 RecR protein P303_09205 PF13662 Toprim domain P303_09210 PF02575 YbaB/EbfC DNA-binding family P303_09215 PF12170 DNA polymerase III tau subunit V interacting with alpha P303_09215 PF12169 DNA polymerase III subunits gamma and tau domain III P303_09215 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding P303_09250 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus P303_09250 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus P303_09255 PF02556 Preprotein translocase subunit SecB P303_09260 PF00581 Rhodanese-like domain P303_09285 PF02237 Biotin protein ligase C terminal domain P303_09285 PF03099 Biotin/lipoate A/B protein ligase family P303_09285 PF08279 HTH domain P303_09290 PF03309 Type III pantothenate kinase P303_09330 PF07963 Prokaryotic N-terminal methylation motif P303_09330 PF00114 Pilin (bacterial filament) P303_09350 PF01168 Alanine racemase, N-terminal domain P303_09355 PF00488 MutS domain V P303_09355 PF05190 MutS family domain IV P303_09355 PF05192 MutS domain III P303_09355 PF01624 MutS domain I P303_09355 PF05188 MutS domain II P303_09360 PF00912 Transglycosylase P303_09365 PF01430 Hsp33 protein P303_09380 PF01042 Endoribonuclease L-PSP P303_09580 PF02498 BRO family, N-terminal domain P303_09580 PF10548 P22AR C-terminal domain P303_09655 PF05973 Phage derived protein Gp49-like (DUF891) P303_09660 PF01381 Helix-turn-helix P303_09690 PF05973 Phage derived protein Gp49-like (DUF891) P303_09695 PF01381 Helix-turn-helix P303_09705 PF10876 Phage tail assemb.y chaperone protein, TAC P303_09760 PF04233 Phage Mu protein F like protein P303_09780 PF00589 Phage integrase family P303_09780 PF13356 Arm DNA-binding domain P303_09780 PF14659 Phage integrase, N-terminal SAM-like domain P303_09785 PF06381 Protein of unknown function (DUF1073) P303_09815 PF00959 Phage lysozyme P303_09855 PF02498 BRO family, N-terminal domain P303_09855 PF10548 P22AR C-terminal domain P303_09860 PF02498 BRO family, N-terminal domain P303_09860 PF10548 P22AR C-terminal domain P303_09865 PF02498 BRO family, N-terminal domain P303_09865 PF10548 P22AR C-terminal domain P303_09950 PF10065 Uncharacterized conserved protein (DUF2303) P303_09965 PF10548 P22AR C-terminal domain P303_09965 PF02498 BRO family, N-terminal domain P303_09970 PF00436 Single-strand binding protein family P303_09990 PF04851 Type III restriction enzyme, res subunit P303_09990 PF02151 UvrB/uvrC motif P303_09990 PF17757 UvrB interaction domain P303_09990 PF00271 Helicase conserved C-terminal domain P303_09990 PF12344 Ultra-violet resistance protein B P303_10005 PF00701 Dihydrodipicolinate synthetase family P303_10015 PF00578 AhpC/TSA family P303_10020 PF02562 PhoH-like protein P303_10020 PF13638 PIN domain P303_10025 PF02562 PhoH-like protein P303_10025 PF13638 PIN domain P303_10030 PF02562 PhoH-like protein P303_10030 PF13638 PIN domain P303_10050 PF00586 AIR synthase related protein, N-terminal domain P303_10050 PF02769 AIR synthase related protein, C-terminal domain P303_10055 PF01029 NusB family P303_10060 PF00885 6,7-dimethyl-8-ribityllumazine synthase P303_10065 PF00925 GTP cyclohydrolase II P303_10065 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase P303_10070 PF00677 Lumazine binding domain P303_10075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region P303_10075 PF01872 RibD C-terminal domain P303_10080 PF03477 ATP cone domain P303_10090 PF00464 Serine hydroxymethyltransferase P303_10095 PF12848 ABC transporter P303_10095 PF00005 ABC transporter P303_10100 PF06039 Malate:quinone oxidoreductase (Mqo) P303_10105 PF04134 Protein of unknown function, DUF393 P303_10115 PF00849 RNA pseudouridylate synthase P303_10115 PF01479 S4 domain P303_10120 PF13525 Outer membrane lipoprotein P303_10130 PF17910 FeoB cytosolic helical domain P303_10130 PF07664 Ferrous iron transport protein B C terminus P303_10130 PF04023 FeoA domain P303_10130 PF07670 Nucleoside recognition P303_10130 PF02421 Ferrous iron transport protein B P303_10140 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase P303_10145 PF01029 NusB family P303_10145 PF01189 16S rRNA methyltransferase RsmB/F P303_10150 PF00551 Formyl transferase P303_10150 PF02911 Formyl transferase, C-terminal domain P303_10155 PF01327 Polypeptide deformylase P303_10165 PF02481 DNA recombination-mediator protein A P303_10165 PF17782 DprA winged helix domain P303_10170 PF04361 Protein of unknown function (DUF494) P303_10175 PF01751 Toprim domain P303_10175 PF13368 Topoisomerase C-terminal repeat P303_10175 PF01131 DNA topoisomerase P303_10180 PF01300 Telomere recombination P303_10210 PF04386 Stringent starvation protein B P303_10215 PF00043 Glutathione S-transferase, C-terminal domain P303_10215 PF02798 Glutathione S-transferase, N-terminal domain P303_10220 PF02167 Cytochrome C1 family P303_10225 PF00032 Cytochrome b(C-terminal)/b6/petD P303_10225 PF00033 Cytochrome b/b6/petB P303_10230 PF00355 Rieske [2Fe-2S] domain P303_10230 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal P303_10235 PF01464 Transglycosylase SLT domain P303_10245 PF04055 Radical SAM superfamily P303_10245 PF01938 TRAM domain P303_10245 PF00919 Uncharacterized protein family UPF0004 P303_10255 PF02562 PhoH-like protein P303_10260 PF02130 Uncharacterized protein family UPF0054 P303_10270 PF03471 Transporter associated domain P303_10270 PF00571 CBS domain P303_10280 PF01544 CorA-like Mg2+ transporter protein P303_10320 PF05860 haemagglutination activity domain P303_10320 PF04829 Pre-toxin domain with VENN motif P303_10320 PF13332 Hemagglutinin repeat P303_10325 PF13018 Extended Signal Peptide of Type V secretion system P303_10325 PF13332 Hemagglutinin repeat P303_10325 PF05860 haemagglutination activity domain P303_10325 PF04829 Pre-toxin domain with VENN motif P303_10345 PF00905 Penicillin binding protein transpeptidase domain P303_10345 PF00912 Transglycosylase P303_10345 PF14814 Bifunctional transglycosylase second domain P303_10360 PF04851 Type III restriction enzyme, res subunit P303_10360 PF13307 Helicase C-terminal domain P303_10375 PF01258 Prokaryotic dksA/traR C4-type zinc finger P303_10380 PF01809 Putative membrane protein insertion efficiency factor P303_10385 PF01979 Amidohydrolase family P303_10390 PF08460 Bacterial SH3 domain P303_10390 PF01551 Peptidase family M23 P303_10395 PF05230 MASE2 domain P303_10395 PF00990 Diguanylate cyclase, GGDEF domain P303_10410 PF00037 4Fe-4S binding domain P303_10425 PF01467 Cytidylyltransferase-like P303_10435 PF00183 Hsp90 protein P303_10435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P303_10440 PF03949 Malic enzyme, NAD binding domain P303_10440 PF00390 Malic enzyme, N-terminal domain P303_10440 PF01515 Phosphate acetyl/butaryl transferase P303_10450 PF00375 Sodium:dicarboxylate symporter family P303_10460 PF00072 Response regulator receiver domain P303_10460 PF09456 RcsC Alpha-Beta-Loop (ABL) P303_10460 PF00512 His Kinase A (phospho-acceptor) domain P303_10460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P303_10465 PF00072 Response regulator receiver domain P303_10465 PF00196 Bacterial regulatory proteins, luxR family P303_10475 PF00512 His Kinase A (phospho-acceptor) domain P303_10475 PF08521 Two-component sensor kinase N-terminal P303_10475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P303_10480 PF00486 Transcriptional regulatory protein, C terminal P303_10480 PF00072 Response regulator receiver domain P303_10490 PF03600 Citrate transporter P303_10495 PF00106 short chain dehydrogenase P303_10500 PF00361 Proton-conducting membrane transporter P303_10505 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus P303_10505 PF00361 Proton-conducting membrane transporter P303_10510 PF00361 Proton-conducting membrane transporter P303_10510 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus P303_10515 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L P303_10520 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 P303_10525 PF12838 4Fe-4S dicluster domain P303_10530 PF00146 NADH dehydrogenase P303_10535 PF00384 Molybdopterin oxidoreductase P303_10535 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal P303_10535 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region P303_10540 PF10531 SLBB domain P303_10540 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region P303_10540 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit P303_10550 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit P303_10555 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit P303_10560 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit P303_10565 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 P303_10580 PF00121 Triosephosphate isomerase P303_10590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion P303_10610 PF18766 SWI2/SNF2 ATPase P303_10610 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) P303_10610 PF11867 Domain of unknown function (DUF3387) P303_10615 PF18766 SWI2/SNF2 ATPase P303_10615 PF12008 Type I restriction and modification enzyme - subunit R C terminal P303_10615 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) P303_10630 PF11791 Aconitate B N-terminal domain P303_10630 PF00330 Aconitase family (aconitate hydratase) P303_10630 PF06434 Aconitate hydratase 2 N-terminus P303_10645 PF00694 Aconitase C-terminal domain P303_10645 PF00330 Aconitase family (aconitate hydratase) P303_10655 PF00501 AMP-binding enzyme P303_10655 PF13193 AMP-binding enzyme C-terminal domain P303_10660 PF01370 NAD dependent epimerase/dehydratase family P303_10660 PF08338 Domain of unknown function (DUF1731) P303_10665 PF00595 PDZ domain P303_10685 PF01594 AI-2E family transporter P303_10690 PF02789 Cytosol aminopeptidase family, N-terminal domain P303_10690 PF00883 Cytosol aminopeptidase family, catalytic domain P303_10705 PF01569 PAP2 superfamily P303_10710 PF02875 Mur ligase family, glutamate ligase domain P303_10710 PF08245 Mur ligase middle domain P303_10710 PF01225 Mur ligase family, catalytic domain P303_10720 PF00365 Phosphofructokinase P303_10735 PF06779 Uncharacterised MFS-type transporter YbfB P303_10745 PF00082 Subtilase family P303_10745 PF12951 Passenger-associated-transport-repeat P303_10745 PF03797 Autotransporter beta-domain P303_10770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III P303_10770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II P303_10770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I P303_10770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain P303_10775 PF00483 Nucleotidyl transferase P303_10775 PF01050 Mannose-6-phosphate isomerase P303_10785 PF04321 RmlD substrate binding domain P303_10790 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase P303_10795 PF00483 Nucleotidyl transferase P303_10800 PF16363 GDP-mannose 4,6 dehydratase P303_10805 PF01012 Electron transfer flavoprotein domain P303_10810 PF01012 Electron transfer flavoprotein domain P303_10810 PF00766 Electron transfer flavoprotein FAD-binding domain P303_10820 PF00270 DEAD/DEAH box helicase P303_10820 PF00271 Helicase conserved C-terminal domain P303_10820 PF03880 DbpA RNA binding domain P303_10865 PF00873 AcrB/AcrD/AcrF family P303_10870 PF05368 NmrA-like family P303_10875 PF01638 HxlR-like helix-turn-helix P303_10880 PF01138 3' exoribonuclease family, domain 1 P303_10880 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain P303_10880 PF00013 KH domain P303_10880 PF03725 3' exoribonuclease family, domain 2 P303_10880 PF00575 S1 RNA binding domain P303_10885 PF00312 Ribosomal protein S15 P303_10890 PF09157 Pseudouridine synthase II TruB, C-terminal P303_10890 PF16198 tRNA pseudouridylate synthase B C-terminal domain P303_10890 PF01509 TruB family pseudouridylate synthase (N terminal domain) P303_10895 PF02033 Ribosome-binding factor A P303_10900 PF08364 Bacterial translation initiation factor IF-2 associated region P303_10900 PF00009 Elongation factor Tu GTP binding domain P303_10900 PF11987 Translation-initiation factor 2 P303_10900 PF04760 Translation initiation factor IF-2, N-terminal region P303_10905 PF13184 NusA-like KH domain P303_10905 PF00575 S1 RNA binding domain P303_10905 PF08529 NusA N-terminal domain P303_10910 PF02576 RimP N-terminal domain P303_10910 PF17384 RimP C-terminal SH3 domain P303_10925 PF00342 Phosphoglucose isomerase P303_10930 PF02261 Aspartate decarboxylase P303_10935 PF02569 Pantoate-beta-alanine ligase P303_10940 PF02548 Ketopantoate hydroxymethyltransferase P303_10945 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) P303_10950 PF01743 Poly A polymerase head domain P303_10950 PF12627 Probable RNA and SrmB- binding site of polymerase A P303_10950 PF12626 Polymerase A arginine-rich C-terminus P303_10960 PF02355 Protein export membrane protein P303_10960 PF07549 SecD/SecF GG Motif P303_10965 PF07549 SecD/SecF GG Motif P303_10965 PF02355 Protein export membrane protein P303_10965 PF13721 SecD export protein N-terminal TM region P303_10970 PF02699 Preprotein translocase subunit P303_10975 PF01702 Queuine tRNA-ribosyltransferase P303_11000 PF01321 Creatinase/Prolidase N-terminal domain P303_11000 PF00557 Metallopeptidase family M24 P303_11030 PF00218 Indole-3-glycerol phosphate synthase P303_11035 PF00591 Glycosyl transferase family, a/b domain P303_11035 PF02885 Glycosyl transferase family, helical bundle domain P303_11040 PF00117 Glutamine amidotransferase class-I P303_11045 PF04715 Anthranilate synthase component I, N terminal region P303_11045 PF00425 chorismate binding enzyme P303_11050 PF00834 Ribulose-phosphate 3 epimerase family P303_11055 PF01556 DnaJ C terminal domain P303_11055 PF00226 DnaJ domain P303_11055 PF00684 DnaJ central domain P303_11060 PF01259 SAICAR synthetase P303_11065 PF01336 OB-fold nucleic acid binding domain P303_11065 PF02811 PHP domain P303_11065 PF14579 Helix-hairpin-helix motif P303_11065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain P303_11065 PF07733 Bacterial DNA polymerase III alpha NTPase domain P303_11070 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit P303_11105 PF01242 6-pyruvoyl tetrahydropterin synthase P303_11110 PF00271 Helicase conserved C-terminal domain P303_11110 PF00270 DEAD/DEAH box helicase P303_11115 PF04452 RNA methyltransferase P303_11120 PF00202 Aminotransferase class-III P303_11125 PF00293 NUDIX domain P303_11130 PF00459 Inositol monophosphatase family P303_11135 PF03819 MazG nucleotide pyrophosphohydrolase domain P303_11140 PF16200 C-terminal region of band_7 P303_11140 PF01145 SPFH domain / Band 7 family P303_11150 PF08669 Glycine cleavage T-protein C-terminal barrel domain P303_11150 PF01571 Aminomethyltransferase folate-binding domain P303_11160 PF01597 Glycine cleavage H-protein P303_11180 PF01026 TatD related DNase P303_11185 PF00535 Glycosyl transferase family 2 P303_11190 PF03006 Haemolysin-III related P303_11195 PF16658 Class II release factor RF3, C-terminal domain P303_11195 PF00009 Elongation factor Tu GTP binding domain P303_11210 PF01578 Cytochrome C assembly protein P303_11215 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain P303_11215 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain P303_11245 PF00579 tRNA synthetases class I (W and Y) P303_11250 PF01551 Peptidase family M23 P303_11250 PF04225 Opacity-associated protein A LysM-like domain P303_11255 PF03702 Anhydro-N-acetylmuramic acid kinase P303_11260 PF07690 Major Facilitator Superfamily P303_11300 PF00156 Phosphoribosyl transferase domain P303_11310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain P303_11310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I P303_11310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II P303_11310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III P303_11315 PF00692 dUTPase P303_11320 PF04127 DNA / pantothenate metabolism flavoprotein P303_11320 PF02441 Flavoprotein P303_11330 PF03485 Arginyl tRNA synthetase N terminal domain P303_11330 PF05746 DALR anticodon binding domain P303_11330 PF00750 tRNA synthetases class I (R) P303_11345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain P303_11345 PF17944 Arginine decarboxylase C-terminal helical extension P303_11345 PF17810 Arginine decarboxylase helical bundle domain P303_11350 PF17284 Spermidine synthase tetramerisation domain P303_11360 PF01380 SIS domain P303_11380 PF02789 Cytosol aminopeptidase family, N-terminal domain P303_11380 PF00883 Cytosol aminopeptidase family, catalytic domain P303_11400 PF08264 Anticodon-binding domain of tRNA P303_11400 PF00133 tRNA synthetases class I (I, L, M and V) P303_11400 PF10458 Valyl tRNA synthetase tRNA binding arm P303_11405 PF05275 Copper resistance protein B precursor (CopB) P303_11410 PF07732 Multicopper oxidase P303_11410 PF07731 Multicopper oxidase P303_11410 PF00394 Multicopper oxidase P303_11430 PF01432 Peptidase family M3 P303_11440 PF02599 Global regulator protein family P303_11445 PF02272 DHHA1 domain P303_11445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain P303_11445 PF01411 tRNA synthetases class II (A) P303_11450 PF00154 recA bacterial DNA recombination protein P303_11455 PF01726 LexA DNA binding domain P303_11455 PF00717 Peptidase S24-like P303_11475 PF13537 Glutamine amidotransferase domain P303_11475 PF00733 Asparagine synthase P303_11485 PF01546 Peptidase family M20/M25/M40 P303_11485 PF07687 Peptidase dimerisation domain P303_11490 PF03960 ArsC family P303_11495 PF14602 Hexapeptide repeat of succinyl-transferase P303_11495 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal P303_11495 PF00132 Bacterial transferase hexapeptide (six repeats) P303_11510 PF00557 Metallopeptidase family M24 P303_11515 PF01245 Ribosomal protein L19 P303_11520 PF01746 tRNA (Guanine-1)-methyltransferase P303_11525 PF01782 RimM N-terminal domain P303_11525 PF05239 PRC-barrel domain P303_11530 PF00886 Ribosomal protein S16 P303_11540 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) P303_11545 PF03279 Bacterial lipid A biosynthesis acyltransferase P303_11565 PF00920 Dehydratase family P303_11575 PF01985 CRS1 / YhbY (CRM) domain P303_11580 PF01728 FtsJ-like methyltransferase P303_11595 PF00809 Pterin binding enzyme P303_11605 PF17209 Hfq protein P303_11610 PF01926 50S ribosome-binding GTPase P303_11610 PF13167 GTP-binding GTPase N-terminal P303_11610 PF16360 GTP-binding GTPase Middle Region P303_11615 PF00083 Sugar (and other) transporter P303_11620 PF02464 Competence-damaged protein P303_11625 PF16970 Type-1 fimbrial protein, A P303_11630 PF02753 Pili assembly chaperone PapD, C-terminal domain P303_11630 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain P303_11635 PF13954 PapC N-terminal domain P303_11635 PF13953 PapC C-terminal domain P303_11635 PF00577 Outer membrane usher protein P303_11640 PF00419 Fimbrial protein P303_11660 PF02881 SRP54-type protein, helical bundle domain P303_11660 PF02978 Signal peptide binding domain P303_11660 PF00448 SRP54-type protein, GTPase domain P303_11665 PF01578 Cytochrome C assembly protein P303_11670 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain P303_11670 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain P303_11710 PF01040 UbiA prenyltransferase family P303_11715 PF01734 Patatin-like phospholipase P303_11720 PF06968 Biotin and Thiamin Synthesis associated domain P303_11720 PF04055 Radical SAM superfamily P303_11725 PF00156 Phosphoribosyl transferase domain P303_11735 PF08535 KorB domain P303_11735 PF06613 KorB C-terminal beta-barrel domain P303_11735 PF02195 ParB-like nuclease domain P303_11740 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ P303_11750 PF00042 Globin P303_11750 PF00970 Oxidoreductase FAD-binding domain P303_11750 PF00175 Oxidoreductase NAD-binding domain P303_11755 PF13361 UvrD-like helicase C-terminal domain P303_11755 PF00580 UvrD/REP helicase N-terminal domain P303_11760 PF02785 Biotin carboxylase C-terminal domain P303_11760 PF00289 Biotin carboxylase, N-terminal domain P303_11760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain P303_11765 PF00364 Biotin-requiring enzyme P303_11770 PF01220 Dehydroquinase class II P303_11780 PF02559 CarD-like/TRCF domain P303_11780 PF00270 DEAD/DEAH box helicase P303_11780 PF00271 Helicase conserved C-terminal domain P303_11780 PF17757 UvrB interaction domain P303_11780 PF03461 TRCF domain P303_11790 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ P303_11805 PF01741 Large-conductance mechanosensitive channel, MscL P303_11815 PF00155 Aminotransferase class I and II P303_11820 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family P303_11830 PF05567 Neisseria PilC beta-propeller domain P303_11860 PF00793 DAHP synthetase I family P303_11895 PF02472 Biopolymer transport protein ExbD/TolR P303_11900 PF02472 Biopolymer transport protein ExbD/TolR P303_11905 PF01618 MotA/TolQ/ExbB proton channel family P303_11910 PF03544 Gram-negative bacterial TonB protein C-terminal P303_11920 PF01435 Peptidase family M48 P303_11930 PF00204 DNA gyrase B P303_11930 PF18053 DNA gyrase B subunit insert domain P303_11930 PF00986 DNA gyrase B subunit, carboxyl terminus P303_11930 PF01751 Toprim domain P303_11930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P303_11940 PF02463 RecF/RecN/SMC N terminal domain P303_11945 PF02768 DNA polymerase III beta subunit, C-terminal domain P303_11945 PF02767 DNA polymerase III beta subunit, central domain P303_11945 PF00712 DNA polymerase III beta subunit, N-terminal domain P303_11950 PF11638 DnaA N-terminal domain P303_11950 PF00308 Bacterial dnaA protein P303_11950 PF08299 Bacterial dnaA protein helix-turn-helix P303_11955 PF00468 Ribosomal protein L34 P303_11960 PF00825 Ribonuclease P P303_11965 PF02096 60Kd inner membrane protein P303_11965 PF14849 YidC periplasmic domain P303_11975 PF10396 GTP-binding protein TrmE N-terminus P303_11975 PF12631 MnmE helical domain P303_11975 PF01926 50S ribosome-binding GTPase P303_11985 PF13018 Extended Signal Peptide of Type V secretion system P303_11985 PF13332 Hemagglutinin repeat P303_11985 PF05860 haemagglutination activity domain P303_11985 PF04829 Pre-toxin domain with VENN motif P303_11990 PF15605 Bacterial toxin 28 P303_11990 PF05860 haemagglutination activity domain P303_11990 PF13332 Hemagglutinin repeat P303_11990 PF04829 Pre-toxin domain with VENN motif P303_11990 PF15605 Bacterial toxin 28 P303_11990 PF05860 haemagglutination activity domain P303_11990 PF13332 Hemagglutinin repeat P303_11990 PF04829 Pre-toxin domain with VENN motif P303_12075 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) P303_12075 PF06594 Haemolysin-type calcium binding protein related domain P303_12110 PF01420 Type I restriction modification DNA specificity domain P303_12115 PF12008 Type I restriction and modification enzyme - subunit R C terminal P303_12115 PF18766 SWI2/SNF2 ATPase P303_12115 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) P303_12125 PF02384 N-6 DNA Methylase P303_12125 PF12161 HsdM N-terminal domain P303_12185 PF03807 NADP oxidoreductase coenzyme F420-dependent P303_12185 PF14748 Pyrroline-5-carboxylate reductase dimerisation P303_12190 PF01645 Conserved region in glutamate synthase P303_12190 PF04898 Glutamate synthase central domain P303_12190 PF00310 Glutamine amidotransferases class-II P303_12190 PF01493 GXGXG motif P303_12195 PF07992 Pyridine nucleotide-disulphide oxidoreductase P303_12195 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster P303_12205 PF00150 Cellulase (glycosyl hydrolase family 5) P303_12220 PF01551 Peptidase family M23 P303_12225 PF13180 PDZ domain P303_12225 PF03572 Peptidase family S41 P303_12230 PF03971 Monomeric isocitrate dehydrogenase P303_12235 PF07498 Rho termination factor, N-terminal domain P303_12235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain P303_12235 PF07497 Rho termination factor, RNA-binding domain P303_12240 PF00085 Thioredoxin P303_12245 PF00271 Helicase conserved C-terminal domain P303_12245 PF00270 DEAD/DEAH box helicase P303_12245 PF12300 ATP-dependent RNA helicase RhlB P303_12250 PF00005 ABC transporter P303_12255 PF18075 FtsX extracellular domain P303_12260 PF01339 CheB methylesterase P303_12260 PF00072 Response regulator receiver domain P303_12265 PF03167 Uracil DNA glycosylase superfamily P303_12270 PF04542 Sigma-70 region 2 P303_12270 PF04545 Sigma-70, region 4 P303_12280 PF00270 DEAD/DEAH box helicase P303_12280 PF18319 PriA DNA helicase Cys-rich region (CRR) domain P303_12280 PF18074 Primosomal protein N C-terminal domain P303_12280 PF00271 Helicase conserved C-terminal domain P303_12280 PF17764 3′ DNA-binding domain (3′BD) P303_12300 PF01554 MatE P303_12305 PF01343 Peptidase family S49 P303_12310 PF04349 Periplasmic glucan biosynthesis protein, MdoG P303_12315 PF13361 UvrD-like helicase C-terminal domain P303_12315 PF00580 UvrD/REP helicase N-terminal domain P303_12325 PF07732 Multicopper oxidase P303_12325 PF07731 Multicopper oxidase P303_12350 PF00731 AIR carboxylase P303_12355 PF02222 ATP-grasp domain P303_12355 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain P303_12360 PF00462 Glutaredoxin P303_12365 PF01914 MarC family integral membrane protein P303_12420 PF02926 THUMP domain P303_12420 PF10672 S-adenosylmethionine-dependent methyltransferase P303_12420 PF01170 Putative RNA methylase family UPF0020 P303_12425 PF00472 RF-1 domain P303_12425 PF03462 PCRF domain P303_12430 PF01488 Shikimate / quinate 5-dehydrogenase P303_12430 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain P303_12430 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain P303_12440 PF03550 Outer membrane lipoprotein LolB P303_12445 PF00288 GHMP kinases N terminal domain P303_12445 PF08544 GHMP kinases C terminal P303_12455 PF14572 Phosphoribosyl synthetase-associated domain P303_12455 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase P303_12460 PF14693 Ribosomal protein TL5, C-terminal domain P303_12460 PF01386 Ribosomal L25p family P303_12465 PF01195 Peptidyl-tRNA hydrolase P303_12490 PF03143 Elongation factor Tu C-terminal domain P303_12490 PF03144 Elongation factor Tu domain 2 P303_12490 PF00009 Elongation factor Tu GTP binding domain P303_12505 PF00467 KOW motif P303_12505 PF02357 Transcription termination factor nusG P303_12510 PF00298 Ribosomal protein L11, RNA binding domain P303_12510 PF03946 Ribosomal protein L11, N-terminal domain P303_12515 PF00687 Ribosomal protein L1p/L10e family P303_12520 PF00466 Ribosomal protein L10 P303_12525 PF16320 Ribosomal protein L7/L12 dimerisation domain P303_12525 PF00542 Ribosomal protein L7/L12 C-terminal domain P303_12530 PF04565 RNA polymerase Rpb2, domain 3 P303_12530 PF04561 RNA polymerase Rpb2, domain 2 P303_12530 PF00562 RNA polymerase Rpb2, domain 6 P303_12530 PF04563 RNA polymerase beta subunit P303_12530 PF10385 RNA polymerase beta subunit external 1 domain P303_12530 PF04560 RNA polymerase Rpb2, domain 7 P303_12535 PF04998 RNA polymerase Rpb1, domain 5 P303_12535 PF04997 RNA polymerase Rpb1, domain 1 P303_12535 PF00623 RNA polymerase Rpb1, domain 2 P303_12535 PF05000 RNA polymerase Rpb1, domain 4 P303_12535 PF04983 RNA polymerase Rpb1, domain 3 P303_12540 PF00164 Ribosomal protein S12/S23 P303_12545 PF00177 Ribosomal protein S7p/S5e P303_12550 PF00679 Elongation factor G C-terminus P303_12550 PF14492 Elongation Factor G, domain II P303_12550 PF03764 Elongation factor G, domain IV P303_12550 PF00009 Elongation factor Tu GTP binding domain P303_12550 PF03144 Elongation factor Tu domain 2 P303_12555 PF00009 Elongation factor Tu GTP binding domain P303_12555 PF03144 Elongation factor Tu domain 2 P303_12555 PF03143 Elongation factor Tu C-terminal domain P303_12560 PF01435 Peptidase family M48 P303_12565 PF00072 Response regulator receiver domain P303_12565 PF00563 EAL domain P303_12565 PF00990 Diguanylate cyclase, GGDEF domain P303_12570 PF00313 'Cold-shock' DNA-binding domain P303_12575 PF02696 Uncharacterized ACR, YdiU/UPF0061 family P303_12595 PF00545 ribonuclease P303_12600 PF02777 Iron/manganese superoxide dismutases, C-terminal domain P303_12600 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain P303_12615 PF00196 Bacterial regulatory proteins, luxR family P303_12615 PF00072 Response regulator receiver domain P303_12620 PF00575 S1 RNA binding domain P303_12620 PF12111 Polyribonucleotide phosphorylase C terminal P303_12620 PF10150 Ribonuclease E/G family P303_12625 PF01479 S4 domain P303_12625 PF00849 RNA pseudouridylate synthase P303_12640 PF01106 NifU-like domain P303_12650 PF11953 Domain of unknown function (DUF3470) P303_12650 PF00037 4Fe-4S binding domain P303_12655 PF11893 Domain of unknown function (DUF3413) P303_12655 PF00884 Sulfatase P303_12660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain P303_12660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain P303_12670 PF00180 Isocitrate/isopropylmalate dehydrogenase P303_12670 PF18324 Hypothetical protein TT1725 P303_12675 PF00462 Glutaredoxin P303_12680 PF13181 Tetratricopeptide repeat P303_12680 PF01435 Peptidase family M48 P303_12685 PF00486 Transcriptional regulatory protein, C terminal P303_12685 PF00072 Response regulator receiver domain P303_12690 PF00512 His Kinase A (phospho-acceptor) domain P303_12690 PF00989 PAS fold P303_12690 PF11808 Phosphate regulon sensor protein PhoR P303_12690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P303_12695 PF13090 Polyphosphate kinase C-terminal domain 2 P303_12695 PF13089 Polyphosphate kinase N-terminal domain P303_12695 PF02503 Polyphosphate kinase middle domain P303_12695 PF17941 Polyphosphate kinase C-terminal domain 1 P303_12700 PF02541 Ppx/GppA phosphatase family P303_12705 PF00149 Calcineurin-like phosphoesterase P303_12710 PF02321 Outer membrane efflux protein P303_12725 PF00664 ABC transporter transmembrane region P303_12725 PF00005 ABC transporter P303_12735 PF00318 Ribosomal protein S2 P303_12740 PF00889 Elongation factor TS P303_12745 PF00072 Response regulator receiver domain P303_12755 PF04551 GcpE protein P303_12760 PF01569 PAP2 superfamily P303_12765 PF00892 EamA-like transporter family P303_12770 PF01565 FAD binding domain P303_12770 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain P303_12775 PF01180 Dihydroorotate dehydrogenase P303_12795 PF00005 ABC transporter P303_12800 PF01061 ABC-2 type transporter P303_12805 PF01336 OB-fold nucleic acid binding domain P303_12805 PF00152 tRNA synthetases class II (D, K and N) P303_12810 PF01521 Iron-sulphur cluster biosynthesis P303_12815 PF01250 Ribosomal protein S6 P303_12820 PF01084 Ribosomal protein S18 P303_12825 PF03948 Ribosomal protein L9, C-terminal domain P303_12825 PF01281 Ribosomal protein L9, N-terminal domain P303_12830 PF02463 RecF/RecN/SMC N terminal domain P303_12835 PF04354 ZipA, C-terminal FtsZ-binding domain P303_12845 PF00533 BRCA1 C Terminus (BRCT) domain P303_12845 PF01653 NAD-dependent DNA ligase adenylation domain P303_12845 PF03120 NAD-dependent DNA ligase OB-fold domain P303_12845 PF12826 Helix-hairpin-helix motif P303_12845 PF03119 NAD-dependent DNA ligase C4 zinc finger domain P303_12855 PF00152 tRNA synthetases class II (D, K and N) P303_12865 PF01008 Initiation factor 2 subunit family P303_12870 PF03989 DNA gyrase C-terminal domain, beta-propeller P303_12870 PF00521 DNA gyrase/topoisomerase IV, subunit A P303_12895 PF08479 POTRA domain, ShlB-type P303_12895 PF17287 POTRA domain P303_12895 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB P303_12905 PF02629 CoA binding domain P303_12905 PF00549 CoA-ligase P303_12910 PF00549 CoA-ligase P303_12910 PF08442 ATP-grasp domain