XFPR_00005	SM00382	ATPases associated with a variety of cellular activities
XFPR_00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
XFPR_00010	SM00480	DNA polymerase III beta subunit
XFPR_00025	SM00387	Histidine kinase-like ATPases
XFPR_00025	SM00433	TopoisomeraseII
XFPR_00040	SM00028	Tetratricopeptide repeats
XFPR_00140	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
XFPR_00185	SM00487	DEAD-like helicases superfamily
XFPR_00185	SM00490	helicase superfamily c-terminal domain
XFPR_00185	SM00982	XFPR_00185
XFPR_00185	SM01058	CarD-like/TRCF domain
XFPR_00205	SM00878	Biotin carboxylase C-terminal domain
XFPR_00240	SM00470	ParB-like nuclease domain
XFPR_00250	SM00729	Elongator protein 3, MiaB family, Radical SAM
XFPR_00250	SM00876	Biotin and Thiamin Synthesis associated domain
XFPR_00295	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
XFPR_00295	SM01232	XFPR_00295
XFPR_00310	SM00382	ATPases associated with a variety of cellular activities
XFPR_00310	SM00962	SRP54-type protein, GTPase domain
XFPR_00310	SM00963	SRP54-type protein, helical bundle domain
XFPR_00390	SM00382	ATPases associated with a variety of cellular activities
XFPR_00400	SM01103	XFPR_00400
XFPR_00445	SM00812	Alpha-L-fucosidase
XFPR_00490	SM01172	XFPR_00490
XFPR_00495	SM00710	Parallel beta-helix repeats
XFPR_00495	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
XFPR_00510	SM00382	ATPases associated with a variety of cellular activities
XFPR_00515	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
XFPR_00605	SM00822	XFPR_00605
XFPR_00615	SM00836	DALR anticodon binding domain
XFPR_00615	SM01016	Arginyl tRNA synthetase N terminal dom
XFPR_00655	SM00645	Papain family cysteine protease
XFPR_00725	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
XFPR_00725	SM01232	XFPR_00725
XFPR_00740	SM00822	XFPR_00740
XFPR_00790	SM00244	prohibitin homologues
XFPR_00820	SM00487	DEAD-like helicases superfamily
XFPR_00820	SM00490	helicase superfamily c-terminal domain
XFPR_00835	SM00563	Phosphate acyltransferases
XFPR_00870	SM00271	DnaJ molecular chaperone homology domain
XFPR_00905	SM00347	helix_turn_helix multiple antibiotic resistance protein
XFPR_00935	SM01323	XFPR_00935
XFPR_01000	SM00316	Ribosomal protein S1-like RNA-binding domain
XFPR_01000	SM00322	K homology RNA-binding domain
XFPR_01020	SM01387	XFPR_01020
XFPR_01025	SM00316	Ribosomal protein S1-like RNA-binding domain
XFPR_01025	SM00322	K homology RNA-binding domain
XFPR_01075	SM00487	DEAD-like helicases superfamily
XFPR_01075	SM00490	helicase superfamily c-terminal domain
XFPR_01080	SM00893	Electron transfer flavoprotein domain
XFPR_01085	SM00893	Electron transfer flavoprotein domain
XFPR_01140	SM00869	Autotransporter beta-domain
XFPR_01205	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
XFPR_01225	SM00966	SpoVT / AbrB like domain 
XFPR_01340	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
XFPR_01345	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
XFPR_01400	SM00448	cheY-homologous receiver domain
XFPR_01400	SM00862	Transcriptional regulatory protein, C terminal
XFPR_01405	SM00387	Histidine kinase-like ATPases
XFPR_01405	SM00388	His Kinase A (phosphoacceptor) domain
XFPR_01480	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
XFPR_01480	SM00954	Region found in RelA / SpoT proteins
XFPR_01490	SM00487	DEAD-like helicases superfamily
XFPR_01490	SM00490	helicase superfamily c-terminal domain
XFPR_01590	SM00382	ATPases associated with a variety of cellular activities
XFPR_01590	SM01086	C-terminal, D2-small domain, of ClpB protein
XFPR_01715	SM00400	zinc finger
XFPR_01855	SM00530	Helix-turn-helix XRE-family like proteins 
XFPR_01875	SM00448	cheY-homologous receiver domain
XFPR_01875	SM00862	Transcriptional regulatory protein, C terminal
XFPR_01880	SM00387	Histidine kinase-like ATPases
XFPR_01920	SM00052	Putative diguanylate phosphodiesterase
XFPR_01920	SM00448	cheY-homologous receiver domain
XFPR_01960	SM00382	ATPases associated with a variety of cellular activities
XFPR_02000	SM00382	ATPases associated with a variety of cellular activities
XFPR_02030	SM00400	zinc finger
XFPR_02030	SM00493	XFPR_02030
XFPR_02030	SM00766	DNA primase DnaG DnaB-binding
XFPR_02055	SM00905	Dihydroneopterin aldolase
XFPR_02065	SM01217	XFPR_02065
XFPR_02095	SM00528	Domain in histone-like proteins of HNS family
XFPR_02110	SM00448	cheY-homologous receiver domain
XFPR_02115	SM00829	Enoylreductase
XFPR_02120	SM00244	prohibitin homologues
XFPR_02125	SM00244	prohibitin homologues
XFPR_02135	SM00788	Adenylosuccinate synthetase
XFPR_02140	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
XFPR_02145	SM00562	XFPR_02145
XFPR_02155	SM00028	Tetratricopeptide repeats
XFPR_02170	SM00564	beta-propeller repeat
XFPR_02175	SM00382	ATPases associated with a variety of cellular activities
XFPR_02180	SM00450	Rhodanese Homology Domain
XFPR_02185	SM00052	Putative diguanylate phosphodiesterase
XFPR_02425	SM00382	ATPases associated with a variety of cellular activities
XFPR_02465	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
XFPR_02490	SM00116	Domain in cystathionine beta-synthase and other proteins.
XFPR_02545	SM00883	Chaperonin 10 Kd subunit
XFPR_02665	SM00478	endonuclease III
XFPR_02665	SM00525	XFPR_02665
XFPR_02670	SM01160	XFPR_02670
XFPR_02705	SM00098	Alkaline phosphatase homologues
XFPR_02710	SM00977	TilS substrate C-terminal domain
XFPR_02760	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
XFPR_02765	SM00822	XFPR_02765
XFPR_02775	SM00825	Beta-ketoacyl synthase
XFPR_02830	SM00841	Elongation factor P, C-terminal
XFPR_02830	SM01185	XFPR_02830
XFPR_02905	SM00382	ATPases associated with a variety of cellular activities
XFPR_02925	SM00363	S4 RNA-binding domain
XFPR_02995	SM00316	Ribosomal protein S1-like RNA-binding domain
XFPR_03000	SM00411	bacterial (prokaryotic) histone like domain
XFPR_03010	SM00028	Tetratricopeptide repeats
XFPR_03035	SM00116	Domain in cystathionine beta-synthase and other proteins.
XFPR_03035	SM01240	XFPR_03035
XFPR_03085	SM00904	Riboflavin kinase
XFPR_03175	SM00382	ATPases associated with a variety of cellular activities
XFPR_03190	SM00450	Rhodanese Homology Domain
XFPR_03210	SM00829	Enoylreductase
XFPR_03260	SM01329	XFPR_03260
XFPR_03315	SM00448	cheY-homologous receiver domain
XFPR_03325	SM01118	XFPR_03325
XFPR_03345	SM00357	Cold shock protein domain
XFPR_03350	SM00869	Autotransporter beta-domain
XFPR_03400	SM00271	DnaJ molecular chaperone homology domain
XFPR_03410	SM00448	cheY-homologous receiver domain
XFPR_03410	SM00862	Transcriptional regulatory protein, C terminal
XFPR_03440	SM00382	ATPases associated with a variety of cellular activities
XFPR_03460	SM00830	Chorismate mutase type II
XFPR_03520	SM00278	Helix-hairpin-helix DNA-binding motif class 1
XFPR_03520	SM00465	GIY-YIG type nucleases (URI domain)
XFPR_03545	SM01004	Delta-aminolevulinic acid dehydratase
XFPR_03580	SM00226	Low molecular weight phosphatase family
XFPR_03595	SM00487	DEAD-like helicases superfamily
XFPR_03605	SM00990	XFPR_03605
XFPR_03635	SM00849	Metallo-beta-lactamase superfamily
XFPR_03645	SM00470	ParB-like nuclease domain
XFPR_03660	SM01259	XFPR_03660
XFPR_03730	SM00564	beta-propeller repeat
XFPR_03760	SM00861	Transketolase, pyrimidine binding domain
XFPR_03775	SM00358	Double-stranded RNA binding motif
XFPR_03775	SM00535	Ribonuclease III family
XFPR_03790	SM00838	Elongation factor G C-terminus
XFPR_03795	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
XFPR_03845	SM00271	DnaJ molecular chaperone homology domain
XFPR_03860	SM00936	Penicillin-binding protein 5, C-terminal domain 
XFPR_03870	SM00732	Likely ribonuclease with RNase H fold.
XFPR_03955	SM01007	Class II Aldolase and Adducin N-terminal domain
XFPR_03980	SM00841	Elongation factor P, C-terminal
XFPR_03980	SM01185	XFPR_03980
XFPR_04015	SM00912	haemagglutination activity domain
XFPR_04140	SM00028	Tetratricopeptide repeats
XFPR_04145	SM00316	Ribosomal protein S1-like RNA-binding domain
XFPR_04145	SM00732	Likely ribonuclease with RNase H fold.
XFPR_04155	SM00849	Metallo-beta-lactamase superfamily
XFPR_04170	SM00479	XFPR_04170
XFPR_04175	SM00331	Sigma factor PP2C-like phosphatases
XFPR_04175	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
XFPR_04215	SM00650	Ribosomal RNA adenine dimethylases
XFPR_04220	SM00479	XFPR_04220
XFPR_04230	SM00382	ATPases associated with a variety of cellular activities
XFPR_04270	SM00382	ATPases associated with a variety of cellular activities
XFPR_04305	SM00400	zinc finger
XFPR_04380	SM00530	Helix-turn-helix XRE-family like proteins 
XFPR_04405	SM01228	XFPR_04405
XFPR_04585	SM00493	XFPR_04585
XFPR_04590	SM00849	Metallo-beta-lactamase superfamily
XFPR_04600	SM00479	XFPR_04600
XFPR_04655	SM01011	Aminopeptidase P, N-terminal domain
XFPR_04710	SM00530	Helix-turn-helix XRE-family like proteins 
XFPR_04745	SM00316	Ribosomal protein S1-like RNA-binding domain
XFPR_04745	SM00357	Cold shock protein domain
XFPR_04745	SM00955	XFPR_04745
XFPR_04755	SM00967	RNA 2'-O ribose methyltransferase substrate binding
XFPR_04800	SM01209	XFPR_04800
XFPR_04800	SM01210	XFPR_04800
XFPR_04805	SM00798	AICARFT/IMPCHase bienzyme
XFPR_04805	SM00851	MGS-like domain
XFPR_04885	SM00448	cheY-homologous receiver domain
XFPR_04890	SM00260	Two component signalling adaptor domain
XFPR_04895	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
XFPR_04900	SM00073	Histidine Phosphotransfer domain
XFPR_04900	SM00260	Two component signalling adaptor domain
XFPR_04900	SM00387	Histidine kinase-like ATPases
XFPR_04900	SM00448	cheY-homologous receiver domain
XFPR_04900	SM01231	XFPR_04900
XFPR_04945	SM00411	bacterial (prokaryotic) histone like domain
XFPR_04970	SM00861	Transketolase, pyrimidine binding domain
XFPR_05085	SM00507	HNH nucleases
XFPR_05095	SM00382	ATPases associated with a variety of cellular activities
XFPR_05095	SM00962	SRP54-type protein, GTPase domain
XFPR_05095	SM00963	SRP54-type protein, helical bundle domain
XFPR_05100	SM00478	endonuclease III
XFPR_05100	SM00525	XFPR_05100
XFPR_05120	SM00278	Helix-hairpin-helix DNA-binding motif class 1
XFPR_05130	SM00382	ATPases associated with a variety of cellular activities
XFPR_05175	SM00855	Phosphoglycerate mutase family
XFPR_05210	SM00855	Phosphoglycerate mutase family
XFPR_05320	SM00245	tail specific protease
XFPR_05325	SM00869	Autotransporter beta-domain
XFPR_05335	SM00387	Histidine kinase-like ATPases
XFPR_05335	SM00388	His Kinase A (phosphoacceptor) domain
XFPR_05340	SM00382	ATPases associated with a variety of cellular activities
XFPR_05340	SM00448	cheY-homologous receiver domain
XFPR_05345	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
XFPR_05360	SM00938	Nitrogen regulatory protein P-II
XFPR_05365	SM01230	XFPR_05365
XFPR_05420	SM00833	Cobalamin synthesis protein cobW C-terminal domain
XFPR_05445	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
XFPR_05445	SM00245	tail specific protease
XFPR_05470	SM00917	LeuA allosteric (dimerisation) domain
XFPR_05505	SM00460	Transglutaminase/protease-like homologues
XFPR_05520	SM00493	XFPR_05520
XFPR_05530	SM00382	ATPases associated with a variety of cellular activities
XFPR_05565	SM00450	Rhodanese Homology Domain
XFPR_05810	SM00953	XFPR_05810
XFPR_05855	SM00829	Enoylreductase
XFPR_05865	SM00822	XFPR_05865
XFPR_05915	SM00829	Enoylreductase
XFPR_05945	SM00829	Enoylreductase
XFPR_05975	SM00530	Helix-turn-helix XRE-family like proteins 
XFPR_06000	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
XFPR_06000	SM00534	ATPase domain of DNA mismatch repair MUTS family
XFPR_06035	SM00248	ankyrin repeats
XFPR_06045	SM00825	Beta-ketoacyl synthase
XFPR_06070	SM00382	ATPases associated with a variety of cellular activities
XFPR_06095	SM00448	cheY-homologous receiver domain
XFPR_06095	SM00850	LytTr DNA-binding domain
XFPR_06125	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
XFPR_06170	SM00984	UDP binding domain
XFPR_06190	SM00382	ATPases associated with a variety of cellular activities
XFPR_06420	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
XFPR_06425	SM00861	Transketolase, pyrimidine binding domain
XFPR_06460	SM00100	Cyclic nucleotide-monophosphate binding domain
XFPR_06460	SM00419	helix_turn_helix, cAMP Regulatory protein
XFPR_06570	SM00382	ATPases associated with a variety of cellular activities
XFPR_06615	SM00729	Elongator protein 3, MiaB family, Radical SAM
XFPR_06635	SM00072	Guanylate kinase homologues.
XFPR_06640	SM01409	XFPR_06640
XFPR_06680	SM00028	Tetratricopeptide repeats
XFPR_06685	SM00528	Domain in histone-like proteins of HNS family
XFPR_06690	SM00347	helix_turn_helix multiple antibiotic resistance protein
XFPR_06700	SM01263	XFPR_06700
XFPR_06720	SM00487	DEAD-like helicases superfamily
XFPR_06730	SM00990	XFPR_06730
XFPR_06735	SM00482	DNA polymerase A domain
XFPR_06740	SM01040	BRO family, N-terminal domain
XFPR_06800	SM00530	Helix-turn-helix XRE-family like proteins 
XFPR_06845	SM01040	BRO family, N-terminal domain
XFPR_06850	SM00885	D5 N terminal like
XFPR_06930	SM00530	Helix-turn-helix XRE-family like proteins 
XFPR_07010	SM00487	DEAD-like helicases superfamily
XFPR_07020	SM00990	XFPR_07020
XFPR_07025	SM00482	DNA polymerase A domain
XFPR_07030	SM01040	BRO family, N-terminal domain
XFPR_07090	SM00530	Helix-turn-helix XRE-family like proteins 
XFPR_07135	SM01040	BRO family, N-terminal domain
XFPR_07140	SM00885	D5 N terminal like
XFPR_07220	SM00530	Helix-turn-helix XRE-family like proteins 
XFPR_07295	SM00382	ATPases associated with a variety of cellular activities
XFPR_07295	SM01086	C-terminal, D2-small domain, of ClpB protein
XFPR_07325	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
XFPR_07340	SM00382	ATPases associated with a variety of cellular activities
XFPR_07390	SM00354	helix_turn _helix lactose operon repressor
XFPR_07430	SM00387	Histidine kinase-like ATPases
XFPR_07430	SM00388	His Kinase A (phosphoacceptor) domain
XFPR_07430	SM00448	cheY-homologous receiver domain
XFPR_07440	SM00382	ATPases associated with a variety of cellular activities
XFPR_07455	SM00382	ATPases associated with a variety of cellular activities
XFPR_07455	SM00843	XFPR_07455
XFPR_07475	SM00316	Ribosomal protein S1-like RNA-binding domain
XFPR_07480	SM00382	ATPases associated with a variety of cellular activities
XFPR_07480	SM01086	C-terminal, D2-small domain, of ClpB protein
XFPR_07605	SM00116	Domain in cystathionine beta-synthase and other proteins.
XFPR_07625	SM00382	ATPases associated with a variety of cellular activities
XFPR_07665	SM00924	MgtE intracellular N domain
XFPR_07735	SM00382	ATPases associated with a variety of cellular activities
XFPR_07735	SM00487	DEAD-like helicases superfamily
XFPR_07735	SM00490	helicase superfamily c-terminal domain
XFPR_07735	SM00847	Helicase associated domain (HA2)  Add an annotation
XFPR_07745	SM00341	Helicase and RNase D C-terminal
XFPR_07745	SM00487	DEAD-like helicases superfamily
XFPR_07745	SM00490	helicase superfamily c-terminal domain
XFPR_07745	SM00956	XFPR_07745
XFPR_07760	SM00382	ATPases associated with a variety of cellular activities
XFPR_07790	SM00859	Semialdehyde dehydrogenase, NAD binding domain
XFPR_07835	SM00849	Metallo-beta-lactamase superfamily
XFPR_07865	SM00347	helix_turn_helix multiple antibiotic resistance protein
XFPR_07870	SM00434	DNA Topoisomerase IV
XFPR_07885	SM00382	ATPases associated with a variety of cellular activities
XFPR_07950	SM00867	YceI-like domain 
XFPR_07960	SM00867	YceI-like domain 
XFPR_07965	SM00478	endonuclease III
XFPR_08010	SM00954	Region found in RelA / SpoT proteins
XFPR_08040	SM00268	Actin
XFPR_08065	SM00382	ATPases associated with a variety of cellular activities
XFPR_08095	SM00463	Small MutS-related domain
XFPR_08115	SM01192	XFPR_08115
XFPR_08115	SM01193	XFPR_08115
XFPR_08135	SM00387	Histidine kinase-like ATPases
XFPR_08135	SM00433	TopoisomeraseII
XFPR_08155	SM00116	Domain in cystathionine beta-synthase and other proteins.
XFPR_08155	SM01091	Transporter associated domain
XFPR_08190	SM00729	Elongator protein 3, MiaB family, Radical SAM
XFPR_08195	SM00637	XFPR_08195
XFPR_08200	SM00869	Autotransporter beta-domain
XFPR_08230	SM00479	XFPR_08230
XFPR_08245	SM00342	helix_turn_helix, arabinose operon control protein
XFPR_08255	SM01359	XFPR_08255
XFPR_08255	SM01360	XFPR_08255
XFPR_08410	SM00487	DEAD-like helicases superfamily
XFPR_08410	SM00490	helicase superfamily c-terminal domain
XFPR_08410	SM00847	Helicase associated domain (HA2)  Add an annotation
XFPR_08430	SM00382	ATPases associated with a variety of cellular activities
XFPR_08440	SM00382	ATPases associated with a variety of cellular activities
XFPR_08460	SM00838	Elongation factor G C-terminus
XFPR_08480	SM00155	Phospholipase D. Active site motifs.
XFPR_08560	SM00411	bacterial (prokaryotic) histone like domain
XFPR_08565	SM00382	ATPases associated with a variety of cellular activities
XFPR_08565	SM00464	Found in ATP-dependent protease La (LON)
XFPR_08570	SM00382	ATPases associated with a variety of cellular activities
XFPR_08570	SM00994	ClpX C4-type zinc finger
XFPR_08570	SM01086	C-terminal, D2-small domain, of ClpB protein
XFPR_08595	SM00984	UDP binding domain
XFPR_08615	SM00382	ATPases associated with a variety of cellular activities
XFPR_08630	SM00662	RNA polymerases D
XFPR_08635	SM00363	S4 RNA-binding domain
XFPR_08635	SM01390	XFPR_08635
XFPR_08685	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
XFPR_08690	SM01374	XFPR_08690
XFPR_08710	SM00322	K homology RNA-binding domain
XFPR_08725	SM01382	XFPR_08725
XFPR_08725	SM01383	XFPR_08725
XFPR_08740	SM01403	XFPR_08740
XFPR_08775	SM00382	ATPases associated with a variety of cellular activities
XFPR_08785	SM00830	Chorismate mutase type II
XFPR_08845	SM00316	Ribosomal protein S1-like RNA-binding domain
XFPR_08895	SM00073	Histidine Phosphotransfer domain
XFPR_08895	SM00387	Histidine kinase-like ATPases
XFPR_08895	SM00388	His Kinase A (phosphoacceptor) domain
XFPR_08895	SM00448	cheY-homologous receiver domain
XFPR_08900	SM00448	cheY-homologous receiver domain
XFPR_08900	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
XFPR_08910	SM00937	XFPR_08910
XFPR_08930	SM00851	MGS-like domain
XFPR_08930	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
XFPR_08935	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
XFPR_08950	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
XFPR_08950	SM00474	3'-5' exonuclease
XFPR_08950	SM00475	5'-3' exonuclease
XFPR_08950	SM00482	DNA polymerase A domain
XFPR_08980	SM00155	Phospholipase D. Active site motifs.
XFPR_08985	SM00867	YceI-like domain 
XFPR_08990	SM00855	Phosphoglycerate mutase family
XFPR_09005	SM00382	ATPases associated with a variety of cellular activities
XFPR_09020	SM00849	Metallo-beta-lactamase superfamily
XFPR_09025	SM00382	ATPases associated with a variety of cellular activities
XFPR_09075	SM00382	ATPases associated with a variety of cellular activities
XFPR_09170	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
XFPR_09210	SM00996	S-adenosyl-L-homocysteine hydrolase
XFPR_09210	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
XFPR_09225	SM00563	Phosphate acyltransferases
XFPR_09230	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
XFPR_09240	SM00869	Autotransporter beta-domain
XFPR_09270	SM00529	Helix-turn-helix diphteria tox regulatory element
XFPR_09345	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
XFPR_09385	SM00840	XFPR_09385
XFPR_09410	SM01234	XFPR_09410
XFPR_09425	SM00267	diguanylate cyclase
XFPR_09455	SM00387	Histidine kinase-like ATPases
XFPR_09460	SM00919	Malic enzyme, NAD binding domain
XFPR_09460	SM01274	XFPR_09460
XFPR_09485	SM00421	helix_turn_helix, Lux Regulon
XFPR_09485	SM00448	cheY-homologous receiver domain
XFPR_09505	SM00530	Helix-turn-helix XRE-family like proteins 
XFPR_09565	SM00966	SpoVT / AbrB like domain 
XFPR_09710	SM01040	BRO family, N-terminal domain
XFPR_09820	SM01040	BRO family, N-terminal domain
XFPR_09850	SM00487	DEAD-like helicases superfamily
XFPR_09850	SM00490	helicase superfamily c-terminal domain
XFPR_09865	SM01130	XFPR_09865
XFPR_09940	SM00382	ATPases associated with a variety of cellular activities
XFPR_09965	SM00363	S4 RNA-binding domain
XFPR_09995	SM00899	XFPR_09995
XFPR_10025	SM00257	Lysin motif
XFPR_10045	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
XFPR_10045	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
XFPR_10045	SM00493	XFPR_10045
XFPR_10070	SM00530	Helix-turn-helix XRE-family like proteins 
XFPR_10110	SM00729	Elongator protein 3, MiaB family, Radical SAM
XFPR_10135	SM00116	Domain in cystathionine beta-synthase and other proteins.
XFPR_10135	SM01091	Transporter associated domain
XFPR_10185	SM00912	haemagglutination activity domain
XFPR_10215	SM00491	XFPR_10215
XFPR_10225	SM00947	Carbonic anhydrase
XFPR_10240	SM00382	ATPases associated with a variety of cellular activities
XFPR_10240	SM00930	XFPR_10240
XFPR_10310	SM00257	Lysin motif
XFPR_10320	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
XFPR_10320	SM00091	PAS domain
XFPR_10320	SM00387	Histidine kinase-like ATPases
XFPR_10320	SM00388	His Kinase A (phosphoacceptor) domain
XFPR_10325	SM01005	Alanine racemase, C-terminal domain
XFPR_10340	SM00636	XFPR_10340
XFPR_10355	SM00758	XFPR_10355
XFPR_10355	SM01217	XFPR_10355
XFPR_10365	SM01149	XFPR_10365
XFPR_10465	SM00637	XFPR_10465
XFPR_10490	SM00957	SecA DEAD-like domain
XFPR_10490	SM00958	SecA preprotein cross-linking domain
XFPR_10510	SM00864	Tubulin/FtsZ family, GTPase domain
XFPR_10510	SM00865	Tubulin/FtsZ family, C-terminal domain
XFPR_10515	SM00842	Cell division protein FtsA
XFPR_10605	SM00869	Autotransporter beta-domain
XFPR_10680	SM00849	Metallo-beta-lactamase superfamily
XFPR_10685	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
XFPR_10715	SM00853	MutL C terminal dimerisation domain
XFPR_10715	SM01340	XFPR_10715
XFPR_10720	SM00646	XFPR_10720
XFPR_10755	SM00474	3'-5' exonuclease
XFPR_10760	SM00528	Domain in histone-like proteins of HNS family
XFPR_10775	SM00422	helix_turn_helix, mercury resistance
XFPR_10780	SM00411	bacterial (prokaryotic) histone like domain
XFPR_10785	SM00873	B3/4 domain
XFPR_10785	SM00874	tRNA synthetase B5 domain
XFPR_10785	SM00896	Ferredoxin-fold anticodon binding domain
XFPR_10810	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
XFPR_10835	SM00448	cheY-homologous receiver domain
XFPR_10835	SM00862	Transcriptional regulatory protein, C terminal
XFPR_10840	SM00387	Histidine kinase-like ATPases
XFPR_10840	SM00388	His Kinase A (phosphoacceptor) domain
XFPR_10880	SM00382	ATPases associated with a variety of cellular activities
XFPR_10880	SM00448	cheY-homologous receiver domain
XFPR_10885	SM00387	Histidine kinase-like ATPases
XFPR_10885	SM00388	His Kinase A (phosphoacceptor) domain
XFPR_10900	SM00881	CoA binding domain
XFPR_10920	SM00434	DNA Topoisomerase IV
XFPR_10945	SM00292	breast cancer carboxy-terminal domain
XFPR_10945	SM00532	Ligase N family
XFPR_10950	SM00771	ZipA, C-terminal domain (FtsZ-binding)
XFPR_10955	SM00968	SMC proteins Flexible Hinge Domain
XFPR_10990	SM00382	ATPases associated with a variety of cellular activities
XFPR_11020	SM00014	Acid phosphatase homologues
XFPR_11030	SM00387	Histidine kinase-like ATPases
XFPR_11035	SM00448	cheY-homologous receiver domain
XFPR_11055	SM00382	ATPases associated with a variety of cellular activities
XFPR_11085	SM00387	Histidine kinase-like ATPases
XFPR_11085	SM00388	His Kinase A (phosphoacceptor) domain
XFPR_11090	SM00448	cheY-homologous receiver domain
XFPR_11090	SM00862	Transcriptional regulatory protein, C terminal
XFPR_11105	SM01329	XFPR_11105
XFPR_11150	SM00363	S4 RNA-binding domain
XFPR_11155	SM00316	Ribosomal protein S1-like RNA-binding domain
XFPR_11160	SM00421	helix_turn_helix, Lux Regulon
XFPR_11160	SM00448	cheY-homologous receiver domain
XFPR_11165	SM00450	Rhodanese Homology Domain
XFPR_11170	SM00448	cheY-homologous receiver domain
XFPR_11190	SM00382	ATPases associated with a variety of cellular activities
XFPR_11200	SM00357	Cold shock protein domain
XFPR_11205	SM00052	Putative diguanylate phosphodiesterase
XFPR_11205	SM00091	PAS domain
XFPR_11205	SM00267	diguanylate cyclase
XFPR_11220	SM00838	Elongation factor G C-terminus
XFPR_11220	SM00889	Elongation factor G, domain IV
XFPR_11235	SM00663	RNA polymerase I subunit A N-terminus
XFPR_11260	SM00649	Ribosomal protein L11/L12
XFPR_11265	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
XFPR_11265	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
XFPR_11315	SM01400	XFPR_11315
XFPR_11335	SM00028	Tetratricopeptide repeats
XFPR_11345	SM00937	XFPR_11345
XFPR_11350	SM00981	XFPR_11350
XFPR_11360	SM00644	XFPR_11360
XFPR_11405	SM01001	AIR carboxylase
XFPR_11465	SM00487	DEAD-like helicases superfamily
XFPR_11465	SM00490	helicase superfamily c-terminal domain
XFPR_11475	SM00986	Uracil DNA glycosylase superfamily
XFPR_11475	SM00987	UreE urease accessory protein, C-terminal domain 
XFPR_11480	SM00448	cheY-homologous receiver domain
XFPR_11490	SM00382	ATPases associated with a variety of cellular activities
XFPR_11495	SM00487	DEAD-like helicases superfamily
XFPR_11495	SM00490	helicase superfamily c-terminal domain
XFPR_11505	SM00357	Cold shock protein domain
XFPR_11505	SM00382	ATPases associated with a variety of cellular activities
XFPR_11505	SM00959	Rho termination factor, N-terminal domain
XFPR_11520	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
XFPR_11520	SM00245	tail specific protease
XFPR_11560	SM00812	Alpha-L-fucosidase
XFPR_11595	SM00487	DEAD-like helicases superfamily
XFPR_11615	SM00487	DEAD-like helicases superfamily
XFPR_11690	SM00487	DEAD-like helicases superfamily
XFPR_11925	SM00912	haemagglutination activity domain
XFPR_11960	SM00530	Helix-turn-helix XRE-family like proteins 
XFPR_11970	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
XFPR_11970	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
XFPR_11970	SM00493	XFPR_11970
XFPR_12065	SM00857	Resolvase, N terminal domain
XFPR_12075	SM00670	Large family of predicted nucleotide-binding domains
XFPR_12175	SM00470	ParB-like nuclease domain
XFPR_12210	SM00530	Helix-turn-helix XRE-family like proteins 
