XFUD_00005 SM00382 ATPases associated with a variety of cellular activities XFUD_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain XFUD_00010 SM00480 DNA polymerase III beta subunit XFUD_00025 SM00387 Histidine kinase-like ATPases XFUD_00025 SM00433 TopoisomeraseII XFUD_00040 SM00028 Tetratricopeptide repeats XFUD_00145 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family XFUD_00185 SM00487 DEAD-like helicases superfamily XFUD_00185 SM00490 helicase superfamily c-terminal domain XFUD_00185 SM00982 XFUD_00185 XFUD_00185 SM01058 CarD-like/TRCF domain XFUD_00205 SM00878 Biotin carboxylase C-terminal domain XFUD_00240 SM00470 ParB-like nuclease domain XFUD_00250 SM00729 Elongator protein 3, MiaB family, Radical SAM XFUD_00250 SM00876 Biotin and Thiamin Synthesis associated domain XFUD_00295 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XFUD_00295 SM01232 XFUD_00295 XFUD_00305 SM00382 ATPases associated with a variety of cellular activities XFUD_00305 SM00962 SRP54-type protein, GTPase domain XFUD_00305 SM00963 SRP54-type protein, helical bundle domain XFUD_00385 SM00382 ATPases associated with a variety of cellular activities XFUD_00395 SM01103 XFUD_00395 XFUD_00440 SM00812 Alpha-L-fucosidase XFUD_00490 SM00710 Parallel beta-helix repeats XFUD_00490 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses XFUD_00505 SM00382 ATPases associated with a variety of cellular activities XFUD_00510 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XFUD_00605 SM00822 XFUD_00605 XFUD_00615 SM00836 DALR anticodon binding domain XFUD_00615 SM01016 Arginyl tRNA synthetase N terminal dom XFUD_00655 SM00645 Papain family cysteine protease XFUD_00725 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XFUD_00725 SM01232 XFUD_00725 XFUD_00740 SM00822 XFUD_00740 XFUD_00790 SM00244 prohibitin homologues XFUD_00820 SM00487 DEAD-like helicases superfamily XFUD_00820 SM00490 helicase superfamily c-terminal domain XFUD_00840 SM00563 Phosphate acyltransferases XFUD_00865 SM00481 DNA polymerase alpha chain like domain XFUD_00875 SM00271 DnaJ molecular chaperone homology domain XFUD_00910 SM00347 helix_turn_helix multiple antibiotic resistance protein XFUD_00940 SM01323 XFUD_00940 XFUD_01005 SM00316 Ribosomal protein S1-like RNA-binding domain XFUD_01005 SM00322 K homology RNA-binding domain XFUD_01025 SM01387 XFUD_01025 XFUD_01030 SM00316 Ribosomal protein S1-like RNA-binding domain XFUD_01030 SM00322 K homology RNA-binding domain XFUD_01080 SM00487 DEAD-like helicases superfamily XFUD_01080 SM00490 helicase superfamily c-terminal domain XFUD_01085 SM00893 Electron transfer flavoprotein domain XFUD_01090 SM00893 Electron transfer flavoprotein domain XFUD_01145 SM00869 Autotransporter beta-domain XFUD_01210 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XFUD_01230 SM00966 SpoVT / AbrB like domain XFUD_01345 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XFUD_01350 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XFUD_01405 SM00448 cheY-homologous receiver domain XFUD_01405 SM00862 Transcriptional regulatory protein, C terminal XFUD_01410 SM00387 Histidine kinase-like ATPases XFUD_01410 SM00388 His Kinase A (phosphoacceptor) domain XFUD_01495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XFUD_01495 SM00954 Region found in RelA / SpoT proteins XFUD_01505 SM00487 DEAD-like helicases superfamily XFUD_01505 SM00490 helicase superfamily c-terminal domain XFUD_01575 SM00965 Secretin and TonB N terminus short domain XFUD_01605 SM00382 ATPases associated with a variety of cellular activities XFUD_01605 SM01086 C-terminal, D2-small domain, of ClpB protein XFUD_01635 SM00448 cheY-homologous receiver domain XFUD_01635 SM00862 Transcriptional regulatory protein, C terminal XFUD_01640 SM00387 Histidine kinase-like ATPases XFUD_01680 SM00052 Putative diguanylate phosphodiesterase XFUD_01680 SM00448 cheY-homologous receiver domain XFUD_01720 SM00382 ATPases associated with a variety of cellular activities XFUD_01760 SM00382 ATPases associated with a variety of cellular activities XFUD_01790 SM00400 zinc finger XFUD_01790 SM00493 XFUD_01790 XFUD_01790 SM00766 DNA primase DnaG DnaB-binding XFUD_01815 SM00905 Dihydroneopterin aldolase XFUD_01825 SM01217 XFUD_01825 XFUD_01855 SM00528 Domain in histone-like proteins of HNS family XFUD_01870 SM00448 cheY-homologous receiver domain XFUD_01875 SM00829 Enoylreductase XFUD_01880 SM00244 prohibitin homologues XFUD_01885 SM00244 prohibitin homologues XFUD_01895 SM00788 Adenylosuccinate synthetase XFUD_01900 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XFUD_01905 SM00562 XFUD_01905 XFUD_01915 SM00028 Tetratricopeptide repeats XFUD_01930 SM00564 beta-propeller repeat XFUD_01935 SM00382 ATPases associated with a variety of cellular activities XFUD_01940 SM00450 Rhodanese Homology Domain XFUD_01945 SM00052 Putative diguanylate phosphodiesterase XFUD_02110 SM00400 zinc finger XFUD_02260 SM00530 Helix-turn-helix XRE-family like proteins XFUD_02460 SM00382 ATPases associated with a variety of cellular activities XFUD_02500 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XFUD_02525 SM00116 Domain in cystathionine beta-synthase and other proteins. XFUD_02580 SM00883 Chaperonin 10 Kd subunit XFUD_02700 SM00478 endonuclease III XFUD_02700 SM00525 XFUD_02700 XFUD_02705 SM01160 XFUD_02705 XFUD_02740 SM00098 Alkaline phosphatase homologues XFUD_02745 SM00977 TilS substrate C-terminal domain XFUD_02790 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XFUD_02795 SM00822 XFUD_02795 XFUD_02805 SM00825 Beta-ketoacyl synthase XFUD_02845 SM00487 DEAD-like helicases superfamily XFUD_02855 SM00990 XFUD_02855 XFUD_02860 SM00482 DNA polymerase A domain XFUD_02865 SM01040 BRO family, N-terminal domain XFUD_02920 SM00530 Helix-turn-helix XRE-family like proteins XFUD_02955 SM01040 BRO family, N-terminal domain XFUD_02960 SM00885 D5 N terminal like XFUD_03045 SM00530 Helix-turn-helix XRE-family like proteins XFUD_03120 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XFUD_03145 SM00873 B3/4 domain XFUD_03145 SM00874 tRNA synthetase B5 domain XFUD_03145 SM00896 Ferredoxin-fold anticodon binding domain XFUD_03150 SM00411 bacterial (prokaryotic) histone like domain XFUD_03155 SM00422 helix_turn_helix, mercury resistance XFUD_03170 SM00528 Domain in histone-like proteins of HNS family XFUD_03175 SM00474 3'-5' exonuclease XFUD_03215 SM00853 MutL C terminal dimerisation domain XFUD_03215 SM01340 XFUD_03215 XFUD_03245 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XFUD_03250 SM00849 Metallo-beta-lactamase superfamily XFUD_03325 SM00869 Autotransporter beta-domain XFUD_03415 SM00842 Cell division protein FtsA XFUD_03420 SM00864 Tubulin/FtsZ family, GTPase domain XFUD_03420 SM00865 Tubulin/FtsZ family, C-terminal domain XFUD_03440 SM00957 SecA DEAD-like domain XFUD_03440 SM00958 SecA preprotein cross-linking domain XFUD_03465 SM00637 XFUD_03465 XFUD_03565 SM01149 XFUD_03565 XFUD_03575 SM00758 XFUD_03575 XFUD_03575 SM01217 XFUD_03575 XFUD_03590 SM00636 XFUD_03590 XFUD_03605 SM01005 Alanine racemase, C-terminal domain XFUD_03610 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XFUD_03610 SM00091 PAS domain XFUD_03610 SM00387 Histidine kinase-like ATPases XFUD_03610 SM00388 His Kinase A (phosphoacceptor) domain XFUD_03620 SM00257 Lysin motif XFUD_03690 SM00382 ATPases associated with a variety of cellular activities XFUD_03690 SM00930 XFUD_03690 XFUD_03705 SM00947 Carbonic anhydrase XFUD_03715 SM00491 XFUD_03715 XFUD_03860 SM00116 Domain in cystathionine beta-synthase and other proteins. XFUD_03860 SM01091 Transporter associated domain XFUD_03880 SM00729 Elongator protein 3, MiaB family, Radical SAM XFUD_03920 SM00530 Helix-turn-helix XRE-family like proteins XFUD_03950 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XFUD_03950 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XFUD_03950 SM00493 XFUD_03950 XFUD_03970 SM00257 Lysin motif XFUD_04000 SM00899 XFUD_04000 XFUD_04030 SM00363 S4 RNA-binding domain XFUD_04050 SM00382 ATPases associated with a variety of cellular activities XFUD_04125 SM01130 XFUD_04125 XFUD_04140 SM00487 DEAD-like helicases superfamily XFUD_04140 SM00490 helicase superfamily c-terminal domain XFUD_04160 SM00421 helix_turn_helix, Lux Regulon XFUD_04160 SM00448 cheY-homologous receiver domain XFUD_04185 SM00919 Malic enzyme, NAD binding domain XFUD_04185 SM01274 XFUD_04185 XFUD_04190 SM00387 Histidine kinase-like ATPases XFUD_04220 SM00267 diguanylate cyclase XFUD_04235 SM01234 XFUD_04235 XFUD_04260 SM00840 XFUD_04260 XFUD_04300 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase XFUD_04345 SM00529 Helix-turn-helix diphteria tox regulatory element XFUD_04375 SM00869 Autotransporter beta-domain XFUD_04385 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XFUD_04390 SM00563 Phosphate acyltransferases XFUD_04405 SM00996 S-adenosyl-L-homocysteine hydrolase XFUD_04405 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XFUD_04445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XFUD_04535 SM00382 ATPases associated with a variety of cellular activities XFUD_04585 SM00382 ATPases associated with a variety of cellular activities XFUD_04590 SM00849 Metallo-beta-lactamase superfamily XFUD_04605 SM00382 ATPases associated with a variety of cellular activities XFUD_04620 SM00855 Phosphoglycerate mutase family XFUD_04625 SM00867 YceI-like domain XFUD_04630 SM00155 Phospholipase D. Active site motifs. XFUD_04660 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XFUD_04660 SM00474 3'-5' exonuclease XFUD_04660 SM00475 5'-3' exonuclease XFUD_04660 SM00482 DNA polymerase A domain XFUD_04675 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain XFUD_04680 SM00851 MGS-like domain XFUD_04680 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XFUD_04700 SM00937 XFUD_04700 XFUD_04710 SM00448 cheY-homologous receiver domain XFUD_04710 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XFUD_04715 SM00073 Histidine Phosphotransfer domain XFUD_04715 SM00387 Histidine kinase-like ATPases XFUD_04715 SM00388 His Kinase A (phosphoacceptor) domain XFUD_04715 SM00448 cheY-homologous receiver domain XFUD_04765 SM00316 Ribosomal protein S1-like RNA-binding domain XFUD_04825 SM00830 Chorismate mutase type II XFUD_04835 SM00382 ATPases associated with a variety of cellular activities XFUD_04870 SM01403 XFUD_04870 XFUD_04890 SM01382 XFUD_04890 XFUD_04890 SM01383 XFUD_04890 XFUD_04905 SM00322 K homology RNA-binding domain XFUD_04925 SM01374 XFUD_04925 XFUD_04930 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XFUD_04980 SM00363 S4 RNA-binding domain XFUD_04980 SM01390 XFUD_04980 XFUD_04985 SM00662 RNA polymerases D XFUD_05000 SM00382 ATPases associated with a variety of cellular activities XFUD_05020 SM00984 UDP binding domain XFUD_05045 SM00382 ATPases associated with a variety of cellular activities XFUD_05045 SM00994 ClpX C4-type zinc finger XFUD_05045 SM01086 C-terminal, D2-small domain, of ClpB protein XFUD_05050 SM00382 ATPases associated with a variety of cellular activities XFUD_05050 SM00464 Found in ATP-dependent protease La (LON) XFUD_05055 SM00411 bacterial (prokaryotic) histone like domain XFUD_05135 SM00155 Phospholipase D. Active site motifs. XFUD_05155 SM00838 Elongation factor G C-terminus XFUD_05185 SM00382 ATPases associated with a variety of cellular activities XFUD_05205 SM00487 DEAD-like helicases superfamily XFUD_05205 SM00490 helicase superfamily c-terminal domain XFUD_05205 SM00847 Helicase associated domain (HA2) Add an annotation XFUD_05295 SM01359 XFUD_05295 XFUD_05295 SM01360 XFUD_05295 XFUD_05305 SM00342 helix_turn_helix, arabinose operon control protein XFUD_05320 SM00479 XFUD_05320 XFUD_05360 SM00637 XFUD_05360 XFUD_05365 SM00729 Elongator protein 3, MiaB family, Radical SAM XFUD_05400 SM00116 Domain in cystathionine beta-synthase and other proteins. XFUD_05400 SM01091 Transporter associated domain XFUD_05420 SM00387 Histidine kinase-like ATPases XFUD_05420 SM00433 TopoisomeraseII XFUD_05440 SM01192 XFUD_05440 XFUD_05440 SM01193 XFUD_05440 XFUD_05460 SM00463 Small MutS-related domain XFUD_05490 SM00382 ATPases associated with a variety of cellular activities XFUD_05515 SM00268 Actin XFUD_05545 SM00954 Region found in RelA / SpoT proteins XFUD_05590 SM00478 endonuclease III XFUD_05595 SM00867 YceI-like domain XFUD_05605 SM00867 YceI-like domain XFUD_05675 SM00382 ATPases associated with a variety of cellular activities XFUD_05690 SM00434 DNA Topoisomerase IV XFUD_05695 SM00347 helix_turn_helix multiple antibiotic resistance protein XFUD_05725 SM00849 Metallo-beta-lactamase superfamily XFUD_05765 SM00859 Semialdehyde dehydrogenase, NAD binding domain XFUD_05795 SM00382 ATPases associated with a variety of cellular activities XFUD_05805 SM00341 Helicase and RNase D C-terminal XFUD_05805 SM00487 DEAD-like helicases superfamily XFUD_05805 SM00490 helicase superfamily c-terminal domain XFUD_05805 SM00956 XFUD_05805 XFUD_05815 SM00382 ATPases associated with a variety of cellular activities XFUD_05815 SM00487 DEAD-like helicases superfamily XFUD_05815 SM00490 helicase superfamily c-terminal domain XFUD_05815 SM00847 Helicase associated domain (HA2) Add an annotation XFUD_05885 SM00924 MgtE intracellular N domain XFUD_05925 SM00382 ATPases associated with a variety of cellular activities XFUD_05945 SM00116 Domain in cystathionine beta-synthase and other proteins. XFUD_05990 SM01211 XFUD_05990 XFUD_06075 SM00382 ATPases associated with a variety of cellular activities XFUD_06075 SM01086 C-terminal, D2-small domain, of ClpB protein XFUD_06080 SM00316 Ribosomal protein S1-like RNA-binding domain XFUD_06100 SM00382 ATPases associated with a variety of cellular activities XFUD_06100 SM00843 XFUD_06100 XFUD_06115 SM00382 ATPases associated with a variety of cellular activities XFUD_06125 SM00387 Histidine kinase-like ATPases XFUD_06125 SM00388 His Kinase A (phosphoacceptor) domain XFUD_06125 SM00448 cheY-homologous receiver domain XFUD_06165 SM00354 helix_turn _helix lactose operon repressor XFUD_06215 SM00382 ATPases associated with a variety of cellular activities XFUD_06230 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain XFUD_06260 SM00382 ATPases associated with a variety of cellular activities XFUD_06260 SM01086 C-terminal, D2-small domain, of ClpB protein XFUD_06275 SM01263 XFUD_06275 XFUD_06290 SM00347 helix_turn_helix multiple antibiotic resistance protein XFUD_06295 SM00528 Domain in histone-like proteins of HNS family XFUD_06300 SM00028 Tetratricopeptide repeats XFUD_06340 SM01409 XFUD_06340 XFUD_06345 SM00072 Guanylate kinase homologues. XFUD_06365 SM00729 Elongator protein 3, MiaB family, Radical SAM XFUD_06410 SM00382 ATPases associated with a variety of cellular activities XFUD_06520 SM00100 Cyclic nucleotide-monophosphate binding domain XFUD_06520 SM00419 helix_turn_helix, cAMP Regulatory protein XFUD_06555 SM00861 Transketolase, pyrimidine binding domain XFUD_06560 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XFUD_06805 SM00382 ATPases associated with a variety of cellular activities XFUD_06820 SM00984 UDP binding domain XFUD_06865 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XFUD_06895 SM00448 cheY-homologous receiver domain XFUD_06895 SM00850 LytTr DNA-binding domain XFUD_06920 SM00382 ATPases associated with a variety of cellular activities XFUD_06945 SM00825 Beta-ketoacyl synthase XFUD_06955 SM00248 ankyrin repeats XFUD_06975 SM01040 BRO family, N-terminal domain XFUD_07080 SM01040 BRO family, N-terminal domain XFUD_07275 SM00530 Helix-turn-helix XRE-family like proteins XFUD_07305 SM00530 Helix-turn-helix XRE-family like proteins XFUD_07315 SM00530 Helix-turn-helix XRE-family like proteins XFUD_07345 SM00533 DNA-binding domain of DNA mismatch repair MUTS family XFUD_07345 SM00534 ATPase domain of DNA mismatch repair MUTS family XFUD_07370 SM00530 Helix-turn-helix XRE-family like proteins XFUD_07400 SM00829 Enoylreductase XFUD_07430 SM00829 Enoylreductase XFUD_07480 SM00822 XFUD_07480 XFUD_07490 SM00829 Enoylreductase XFUD_07535 SM00953 XFUD_07535 XFUD_07780 SM00450 Rhodanese Homology Domain XFUD_07815 SM00382 ATPases associated with a variety of cellular activities XFUD_07825 SM00493 XFUD_07825 XFUD_07840 SM00460 Transglutaminase/protease-like homologues XFUD_07875 SM00917 LeuA allosteric (dimerisation) domain XFUD_07900 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XFUD_07900 SM00245 tail specific protease XFUD_07925 SM00833 Cobalamin synthesis protein cobW C-terminal domain XFUD_07980 SM01230 XFUD_07980 XFUD_07985 SM00938 Nitrogen regulatory protein P-II XFUD_08000 SM00382 ATPases associated with a variety of cellular activities XFUD_08000 SM00448 cheY-homologous receiver domain XFUD_08005 SM00387 Histidine kinase-like ATPases XFUD_08005 SM00388 His Kinase A (phosphoacceptor) domain XFUD_08020 SM00869 Autotransporter beta-domain XFUD_08025 SM00245 tail specific protease XFUD_08155 SM00855 Phosphoglycerate mutase family XFUD_08190 SM00855 Phosphoglycerate mutase family XFUD_08235 SM00382 ATPases associated with a variety of cellular activities XFUD_08245 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XFUD_08265 SM00478 endonuclease III XFUD_08265 SM00525 XFUD_08265 XFUD_08270 SM00382 ATPases associated with a variety of cellular activities XFUD_08270 SM00962 SRP54-type protein, GTPase domain XFUD_08270 SM00963 SRP54-type protein, helical bundle domain XFUD_08280 SM00507 HNH nucleases XFUD_08395 SM00861 Transketolase, pyrimidine binding domain XFUD_08420 SM00411 bacterial (prokaryotic) histone like domain XFUD_08465 SM00073 Histidine Phosphotransfer domain XFUD_08465 SM00260 Two component signalling adaptor domain XFUD_08465 SM00387 Histidine kinase-like ATPases XFUD_08465 SM00448 cheY-homologous receiver domain XFUD_08465 SM01231 XFUD_08465 XFUD_08470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XFUD_08475 SM00260 Two component signalling adaptor domain XFUD_08480 SM00448 cheY-homologous receiver domain XFUD_08560 SM00798 AICARFT/IMPCHase bienzyme XFUD_08560 SM00851 MGS-like domain XFUD_08565 SM01209 XFUD_08565 XFUD_08565 SM01210 XFUD_08565 XFUD_08605 SM00967 RNA 2'-O ribose methyltransferase substrate binding XFUD_08650 SM00530 Helix-turn-helix XRE-family like proteins XFUD_08705 SM01011 Aminopeptidase P, N-terminal domain XFUD_08760 SM00479 XFUD_08760 XFUD_08775 SM00493 XFUD_08775 XFUD_08785 SM00857 Resolvase, N terminal domain XFUD_08945 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XFUD_08945 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XFUD_08945 SM00493 XFUD_08945 XFUD_08955 SM00493 XFUD_08955 XFUD_09135 SM01228 XFUD_09135 XFUD_09155 SM00530 Helix-turn-helix XRE-family like proteins XFUD_09225 SM00400 zinc finger XFUD_09260 SM00382 ATPases associated with a variety of cellular activities XFUD_09305 SM00382 ATPases associated with a variety of cellular activities XFUD_09315 SM00479 XFUD_09315 XFUD_09320 SM00650 Ribosomal RNA adenine dimethylases XFUD_09360 SM00331 Sigma factor PP2C-like phosphatases XFUD_09360 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain XFUD_09365 SM00479 XFUD_09365 XFUD_09380 SM00849 Metallo-beta-lactamase superfamily XFUD_09385 SM00316 Ribosomal protein S1-like RNA-binding domain XFUD_09385 SM00732 Likely ribonuclease with RNase H fold. XFUD_09390 SM00028 Tetratricopeptide repeats XFUD_09600 SM00841 Elongation factor P, C-terminal XFUD_09600 SM01185 XFUD_09600 XFUD_09625 SM01007 Class II Aldolase and Adducin N-terminal domain XFUD_09710 SM00732 Likely ribonuclease with RNase H fold. XFUD_09720 SM00936 Penicillin-binding protein 5, C-terminal domain XFUD_09735 SM00271 DnaJ molecular chaperone homology domain XFUD_09770 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XFUD_09775 SM00838 Elongation factor G C-terminus XFUD_09790 SM00358 Double-stranded RNA binding motif XFUD_09790 SM00535 Ribonuclease III family XFUD_09805 SM00861 Transketolase, pyrimidine binding domain XFUD_09900 SM01259 XFUD_09900 XFUD_09915 SM00470 ParB-like nuclease domain XFUD_09925 SM00849 Metallo-beta-lactamase superfamily XFUD_09960 SM00990 XFUD_09960 XFUD_09975 SM00487 DEAD-like helicases superfamily XFUD_09985 SM00226 Low molecular weight phosphatase family XFUD_10020 SM01004 Delta-aminolevulinic acid dehydratase XFUD_10045 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XFUD_10045 SM00465 GIY-YIG type nucleases (URI domain) XFUD_10100 SM00830 Chorismate mutase type II XFUD_10120 SM00382 ATPases associated with a variety of cellular activities XFUD_10150 SM00448 cheY-homologous receiver domain XFUD_10150 SM00862 Transcriptional regulatory protein, C terminal XFUD_10210 SM00869 Autotransporter beta-domain XFUD_10215 SM00357 Cold shock protein domain XFUD_10235 SM01118 XFUD_10235 XFUD_10245 SM00448 cheY-homologous receiver domain XFUD_10300 SM01329 XFUD_10300 XFUD_10350 SM00829 Enoylreductase XFUD_10365 SM00450 Rhodanese Homology Domain XFUD_10380 SM00382 ATPases associated with a variety of cellular activities XFUD_10475 SM00904 Riboflavin kinase XFUD_10525 SM00116 Domain in cystathionine beta-synthase and other proteins. XFUD_10525 SM01240 XFUD_10525 XFUD_10550 SM00028 Tetratricopeptide repeats XFUD_10560 SM00411 bacterial (prokaryotic) histone like domain XFUD_10565 SM00316 Ribosomal protein S1-like RNA-binding domain XFUD_10635 SM00363 S4 RNA-binding domain XFUD_10655 SM00382 ATPases associated with a variety of cellular activities XFUD_10730 SM00841 Elongation factor P, C-terminal XFUD_10730 SM01185 XFUD_10730 XFUD_10820 SM00530 Helix-turn-helix XRE-family like proteins XFUD_10900 SM00885 D5 N terminal like XFUD_10940 SM00530 Helix-turn-helix XRE-family like proteins XFUD_11010 SM01040 BRO family, N-terminal domain XFUD_11015 SM00482 DNA polymerase A domain XFUD_11020 SM00990 XFUD_11020 XFUD_11030 SM00487 DEAD-like helicases superfamily XFUD_11055 SM00448 cheY-homologous receiver domain XFUD_11055 SM00862 Transcriptional regulatory protein, C terminal XFUD_11060 SM00387 Histidine kinase-like ATPases XFUD_11060 SM00388 His Kinase A (phosphoacceptor) domain XFUD_11105 SM00382 ATPases associated with a variety of cellular activities XFUD_11105 SM00448 cheY-homologous receiver domain XFUD_11110 SM00387 Histidine kinase-like ATPases XFUD_11110 SM00388 His Kinase A (phosphoacceptor) domain XFUD_11120 SM00881 CoA binding domain XFUD_11140 SM00434 DNA Topoisomerase IV XFUD_11165 SM00292 breast cancer carboxy-terminal domain XFUD_11165 SM00532 Ligase N family XFUD_11170 SM00771 ZipA, C-terminal domain (FtsZ-binding) XFUD_11175 SM00968 SMC proteins Flexible Hinge Domain XFUD_11210 SM00382 ATPases associated with a variety of cellular activities XFUD_11240 SM00014 Acid phosphatase homologues XFUD_11255 SM00387 Histidine kinase-like ATPases XFUD_11260 SM00448 cheY-homologous receiver domain XFUD_11280 SM00382 ATPases associated with a variety of cellular activities XFUD_11310 SM00387 Histidine kinase-like ATPases XFUD_11310 SM00388 His Kinase A (phosphoacceptor) domain XFUD_11315 SM00448 cheY-homologous receiver domain XFUD_11315 SM00862 Transcriptional regulatory protein, C terminal XFUD_11330 SM01329 XFUD_11330 XFUD_11375 SM00363 S4 RNA-binding domain XFUD_11380 SM00316 Ribosomal protein S1-like RNA-binding domain XFUD_11385 SM00421 helix_turn_helix, Lux Regulon XFUD_11385 SM00448 cheY-homologous receiver domain XFUD_11390 SM00450 Rhodanese Homology Domain XFUD_11395 SM00448 cheY-homologous receiver domain XFUD_11415 SM00382 ATPases associated with a variety of cellular activities XFUD_11425 SM00357 Cold shock protein domain XFUD_11430 SM00052 Putative diguanylate phosphodiesterase XFUD_11430 SM00091 PAS domain XFUD_11430 SM00267 diguanylate cyclase XFUD_11445 SM00838 Elongation factor G C-terminus XFUD_11445 SM00889 Elongation factor G, domain IV XFUD_11460 SM00663 RNA polymerase I subunit A N-terminus XFUD_11485 SM00649 Ribosomal protein L11/L12 XFUD_11490 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. XFUD_11490 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XFUD_11540 SM01400 XFUD_11540 XFUD_11560 SM00028 Tetratricopeptide repeats XFUD_11570 SM00937 XFUD_11570 XFUD_11575 SM00981 XFUD_11575 XFUD_11585 SM00644 XFUD_11585 XFUD_11630 SM01001 AIR carboxylase XFUD_11690 SM00487 DEAD-like helicases superfamily XFUD_11690 SM00490 helicase superfamily c-terminal domain XFUD_11700 SM00986 Uracil DNA glycosylase superfamily XFUD_11700 SM00987 UreE urease accessory protein, C-terminal domain XFUD_11705 SM00448 cheY-homologous receiver domain XFUD_11715 SM00382 ATPases associated with a variety of cellular activities XFUD_11720 SM00487 DEAD-like helicases superfamily XFUD_11720 SM00490 helicase superfamily c-terminal domain XFUD_11730 SM00357 Cold shock protein domain XFUD_11730 SM00382 ATPases associated with a variety of cellular activities XFUD_11730 SM00959 Rho termination factor, N-terminal domain XFUD_11745 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XFUD_11745 SM00245 tail specific protease XFUD_11820 SM00487 DEAD-like helicases superfamily XFUD_11840 SM00487 DEAD-like helicases superfamily XFUD_11900 SM00487 DEAD-like helicases superfamily XFUD_12155 SM00530 Helix-turn-helix XRE-family like proteins XFUD_12165 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XFUD_12165 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XFUD_12165 SM00493 XFUD_12165 XFUD_12255 SM00857 Resolvase, N terminal domain XFUD_12265 SM00670 Large family of predicted nucleotide-binding domains XFUD_12335 SM00530 Helix-turn-helix XRE-family like proteins XFUD_12460 SM00470 ParB-like nuclease domain