XFUD_05070 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 SUPERFAMILY SSF109998 70 311 8.63E-15 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily XFUD_05070 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 325 346 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 XFUD_05070 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 Pfam PF13616 PPIC-type PPIASE domain 279 387 5.0E-28 T 11-10-2018 XFUD_05070 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 Pfam PF13623 SurA N-terminal domain 2 157 1.1E-19 T 11-10-2018 XFUD_05070 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 Gene3D G3DSA:3.10.50.40 278 410 9.4E-35 T 11-10-2018 XFUD_05070 a04b99ebf71fb16b0cfe6446ab3f6ebe 655 SUPERFAMILY SSF54534 284 388 1.11E-29 T 11-10-2018 XFUD_08725 d82f5a72213655db108aad67f7944211 196 SUPERFAMILY SSF100950 4 187 6.42E-50 T 11-10-2018 IPR037171 NagB/RpiA transferase-like XFUD_08725 d82f5a72213655db108aad67f7944211 196 Gene3D G3DSA:3.40.50.10420 4 190 1.7E-45 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily XFUD_08725 d82f5a72213655db108aad67f7944211 196 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 184 7.0E-33 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase XFUD_08725 d82f5a72213655db108aad67f7944211 196 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 184 2.5E-47 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase XFUD_08725 d82f5a72213655db108aad67f7944211 196 PIRSF PIRSF006806 1 186 9.1E-31 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase XFUD_12230 460e1f133bab6ed6a6e3b5bac8f99be0 667 Gene3D G3DSA:3.40.50.300 308 542 5.4E-44 T 11-10-2018 XFUD_12230 460e1f133bab6ed6a6e3b5bac8f99be0 667 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 99 551 1.2E-107 T 11-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 XFUD_12230 460e1f133bab6ed6a6e3b5bac8f99be0 667 SUPERFAMILY SSF52540 96 544 4.57E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_03590 71b046b0206b731876ca360e0726e423 351 Pfam PF00704 Glycosyl hydrolases family 18 33 336 2.5E-28 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 XFUD_03590 71b046b0206b731876ca360e0726e423 351 Gene3D G3DSA:3.10.50.10 244 309 3.7E-77 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily XFUD_03590 71b046b0206b731876ca360e0726e423 351 SMART SM00636 23 338 5.3E-28 T 11-10-2018 IPR011583 Chitinase II GO:0008061 XFUD_03590 71b046b0206b731876ca360e0726e423 351 SUPERFAMILY SSF51445 42 343 1.31E-41 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFUD_03590 71b046b0206b731876ca360e0726e423 351 Gene3D G3DSA:3.20.20.80 45 343 3.7E-77 T 11-10-2018 XFUD_04240 fe3d25c54bdb77cf4a341be05f5e561b 314 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 273 304 4.7E-7 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 XFUD_04240 fe3d25c54bdb77cf4a341be05f5e561b 314 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 195 304 3.4E-41 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 XFUD_04240 fe3d25c54bdb77cf4a341be05f5e561b 314 SUPERFAMILY SSF109635 183 270 3.66E-26 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily XFUD_04240 fe3d25c54bdb77cf4a341be05f5e561b 314 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 191 313 27.627 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 XFUD_04240 fe3d25c54bdb77cf4a341be05f5e561b 314 Gene3D G3DSA:1.20.120.910 185 313 3.4E-29 T 11-10-2018 XFUD_04240 fe3d25c54bdb77cf4a341be05f5e561b 314 SUPERFAMILY SSF57716 274 312 5.42E-6 T 11-10-2018 XFUD_02320 47f304d8b997c06fd5295b3159ff325d 273 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 XFUD_02320 47f304d8b997c06fd5295b3159ff325d 273 SUPERFAMILY SSF53790 5 225 2.22E-79 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 XFUD_02320 47f304d8b997c06fd5295b3159ff325d 273 Gene3D G3DSA:3.40.1010.10 1 113 3.4E-41 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 XFUD_02320 47f304d8b997c06fd5295b3159ff325d 273 PIRSF PIRSF005917 1 273 9.5E-100 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 XFUD_02320 47f304d8b997c06fd5295b3159ff325d 273 Gene3D G3DSA:3.30.950.10 114 234 8.2E-43 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 XFUD_02320 47f304d8b997c06fd5295b3159ff325d 273 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 227 37.906 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 XFUD_02320 47f304d8b997c06fd5295b3159ff325d 273 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 206 1.3E-27 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 XFUD_02320 47f304d8b997c06fd5295b3159ff325d 273 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 271 5.3E-85 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 XFUD_03680 1f4f8a830369a48114e1000344886cba 261 PIRSF PIRSF002854 2 261 1.6E-101 T 11-10-2018 IPR004872 Lipoprotein NlpA family XFUD_03680 1f4f8a830369a48114e1000344886cba 261 Gene3D G3DSA:3.40.190.10 26 257 1.9E-96 T 11-10-2018 XFUD_03680 1f4f8a830369a48114e1000344886cba 261 Pfam PF03180 NLPA lipoprotein 26 261 1.2E-98 T 11-10-2018 IPR004872 Lipoprotein NlpA family XFUD_03680 1f4f8a830369a48114e1000344886cba 261 Gene3D G3DSA:3.40.190.10 107 211 1.9E-96 T 11-10-2018 XFUD_03680 1f4f8a830369a48114e1000344886cba 261 SUPERFAMILY SSF53850 26 261 1.28E-80 T 11-10-2018 XFUD_05400 0ad58068dafc1ff7c492de22d3f8fdcc 438 Pfam PF00571 CBS domain 215 269 0.0028 T 11-10-2018 IPR000644 CBS domain XFUD_05400 0ad58068dafc1ff7c492de22d3f8fdcc 438 Pfam PF00571 CBS domain 283 330 6.7E-8 T 11-10-2018 IPR000644 CBS domain XFUD_05400 0ad58068dafc1ff7c492de22d3f8fdcc 438 Gene3D G3DSA:3.10.580.10 191 339 1.5E-39 T 11-10-2018 XFUD_05400 0ad58068dafc1ff7c492de22d3f8fdcc 438 Pfam PF03471 Transporter associated domain 349 427 3.6E-21 T 11-10-2018 IPR005170 Transporter-associated domain XFUD_05400 0ad58068dafc1ff7c492de22d3f8fdcc 438 SMART SM00116 283 331 0.0052 T 11-10-2018 IPR000644 CBS domain XFUD_05400 0ad58068dafc1ff7c492de22d3f8fdcc 438 SMART SM00116 221 270 0.66 T 11-10-2018 IPR000644 CBS domain XFUD_05400 0ad58068dafc1ff7c492de22d3f8fdcc 438 Gene3D G3DSA:3.30.465.10 340 428 6.9E-36 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XFUD_05400 0ad58068dafc1ff7c492de22d3f8fdcc 438 SUPERFAMILY SSF54631 199 332 5.43E-27 T 11-10-2018 XFUD_05400 0ad58068dafc1ff7c492de22d3f8fdcc 438 SMART SM01091 347 428 8.4E-32 T 11-10-2018 IPR005170 Transporter-associated domain XFUD_05400 0ad58068dafc1ff7c492de22d3f8fdcc 438 Pfam PF01595 Domain of unknown function DUF21 5 197 3.2E-45 T 11-10-2018 IPR002550 CNNM, transmembrane domain XFUD_05400 0ad58068dafc1ff7c492de22d3f8fdcc 438 SUPERFAMILY SSF56176 342 427 4.09E-24 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XFUD_01235 7f6e47391904f9d7bdada36389aa5374 132 SUPERFAMILY SSF88723 3 119 2.81E-9 T 11-10-2018 IPR029060 PIN-like domain superfamily XFUD_01235 7f6e47391904f9d7bdada36389aa5374 132 Gene3D G3DSA:3.40.50.1010 1 106 3.2E-7 T 11-10-2018 XFUD_01235 7f6e47391904f9d7bdada36389aa5374 132 Pfam PF01850 PIN domain 4 119 5.1E-7 T 11-10-2018 IPR002716 PIN domain XFUD_09860 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 SUPERFAMILY SSF81338 5 253 6.54E-62 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 XFUD_09860 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 ProSitePatterns PS00221 MIP family signature. 67 75 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 XFUD_09860 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 Pfam PF00230 Major intrinsic protein 4 247 7.3E-49 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFUD_09860 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 PRINTS PR00783 Major intrinsic protein family signature 149 167 1.5E-42 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFUD_09860 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 PRINTS PR00783 Major intrinsic protein family signature 7 26 1.5E-42 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFUD_09860 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 PRINTS PR00783 Major intrinsic protein family signature 183 205 1.5E-42 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFUD_09860 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 PRINTS PR00783 Major intrinsic protein family signature 49 73 1.5E-42 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFUD_09860 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 PRINTS PR00783 Major intrinsic protein family signature 86 105 1.5E-42 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFUD_09860 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 PRINTS PR00783 Major intrinsic protein family signature 231 251 1.5E-42 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFUD_09860 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 TIGRFAM TIGR00861 MIP: MIP family channel proteins 13 247 9.4E-58 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 XFUD_09860 bb433405e0d7aa4cf9e21eb8e1a2e1fe 275 Gene3D G3DSA:1.20.1080.10 1 256 2.5E-76 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 Pfam PF01301 Glycosyl hydrolases family 35 34 352 3.8E-117 T 11-10-2018 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 548 564 7.0E-48 T 11-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 114 133 7.0E-48 T 11-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 38 55 7.0E-48 T 11-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 169 184 7.0E-48 T 11-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 321 337 7.0E-48 T 11-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 59 77 7.0E-48 T 11-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 255 270 7.0E-48 T 11-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 Gene3D G3DSA:3.20.20.80 26 295 5.2E-100 T 11-10-2018 XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 Gene3D G3DSA:2.60.120.260 296 589 2.0E-90 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 SUPERFAMILY SSF51445 28 352 2.08E-94 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 ProSitePatterns PS01182 Glycosyl hydrolases family 35 putative active site. 171 183 - T 11-10-2018 IPR019801 Glycoside hydrolase, family 35, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 PIRSF PIRSF006336 14 604 9.3E-177 T 11-10-2018 IPR026283 Beta-galactosidase 1-like GO:0004565 XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 Gene3D G3DSA:2.60.120.260 375 506 2.0E-90 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFUD_03555 288ab61d2ab6a3abc36f01aa9460a1bd 612 SUPERFAMILY SSF49785 466 593 3.83E-20 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFUD_05000 7ebe78fbf8505e69b725c35281691a96 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 496 1.1E-181 T 11-10-2018 IPR004482 Mg chelatase-related protein XFUD_05000 7ebe78fbf8505e69b725c35281691a96 506 SMART SM00382 211 393 1.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_05000 7ebe78fbf8505e69b725c35281691a96 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 210 225 7.7E-7 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XFUD_05000 7ebe78fbf8505e69b725c35281691a96 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 290 304 7.7E-7 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XFUD_05000 7ebe78fbf8505e69b725c35281691a96 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 318 331 7.7E-7 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XFUD_05000 7ebe78fbf8505e69b725c35281691a96 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 342 354 7.7E-7 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 XFUD_05000 7ebe78fbf8505e69b725c35281691a96 506 SUPERFAMILY SSF52540 191 501 5.28E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05000 7ebe78fbf8505e69b725c35281691a96 506 Gene3D G3DSA:3.40.50.300 186 499 4.8E-56 T 11-10-2018 XFUD_05000 7ebe78fbf8505e69b725c35281691a96 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 394 2.0E-95 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain XFUD_05000 7ebe78fbf8505e69b725c35281691a96 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 4.7E-41 T 11-10-2018 XFUD_05000 7ebe78fbf8505e69b725c35281691a96 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 404 496 3.3E-28 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain XFUD_05000 7ebe78fbf8505e69b725c35281691a96 506 SUPERFAMILY SSF54211 10 168 1.9E-28 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 6.5E-14 T 11-10-2018 IPR000362 Fumarate lyase family XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00149 Fumarate lyase superfamily signature 150 168 6.5E-14 T 11-10-2018 IPR000362 Fumarate lyase family XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00149 Fumarate lyase superfamily signature 105 123 6.5E-14 T 11-10-2018 IPR000362 Fumarate lyase family XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 TIGRFAM TIGR00838 argH: argininosuccinate lyase 24 398 1.8E-86 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 Gene3D G3DSA:1.10.275.10 34 232 1.3E-103 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 Gene3D G3DSA:1.20.200.10 122 362 1.3E-103 T 11-10-2018 XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 Gene3D G3DSA:1.10.40.30 363 401 1.3E-103 T 11-10-2018 XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00145 Argininosuccinate lyase family signature 196 212 2.6E-30 T 11-10-2018 XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 2.6E-30 T 11-10-2018 XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00145 Argininosuccinate lyase family signature 145 165 2.6E-30 T 11-10-2018 XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00145 Argininosuccinate lyase family signature 104 126 2.6E-30 T 11-10-2018 XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 PRINTS PR00145 Argininosuccinate lyase family signature 313 332 2.6E-30 T 11-10-2018 XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 SUPERFAMILY SSF48557 23 409 3.3E-87 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 Pfam PF00206 Lyase 34 302 6.9E-47 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 429 30.091 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFUD_04295 1dd038b1bd7566735fd6c3c9b4ce2322 440 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 XFUD_09865 f89489ff9d351bddb2adcb338bc04028 499 SUPERFAMILY SSF53067 4 255 6.75E-93 T 11-10-2018 XFUD_09865 f89489ff9d351bddb2adcb338bc04028 499 SUPERFAMILY SSF53067 255 494 4.03E-80 T 11-10-2018 XFUD_09865 f89489ff9d351bddb2adcb338bc04028 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 XFUD_09865 f89489ff9d351bddb2adcb338bc04028 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 450 2.9E-61 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 XFUD_09865 f89489ff9d351bddb2adcb338bc04028 499 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 494 4.4E-219 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 XFUD_09865 f89489ff9d351bddb2adcb338bc04028 499 Gene3D G3DSA:3.30.420.40 1 253 2.3E-106 T 11-10-2018 XFUD_09865 f89489ff9d351bddb2adcb338bc04028 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 XFUD_09865 f89489ff9d351bddb2adcb338bc04028 499 PIRSF PIRSF000538 3 496 3.8E-175 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 XFUD_09865 f89489ff9d351bddb2adcb338bc04028 499 Gene3D G3DSA:3.30.420.40 254 498 9.5E-85 T 11-10-2018 XFUD_09865 f89489ff9d351bddb2adcb338bc04028 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 1.8E-81 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 XFUD_09865 f89489ff9d351bddb2adcb338bc04028 499 Hamap MF_00186 Glycerol kinase [glpK]. 3 497 58.403 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 XFUD_01575 8ed880f983406165e6c2cc8ac468d7f2 637 Gene3D G3DSA:3.55.50.30 178 292 4.6E-39 T 11-10-2018 XFUD_01575 8ed880f983406165e6c2cc8ac468d7f2 637 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 573 606 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 XFUD_01575 8ed880f983406165e6c2cc8ac468d7f2 637 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 196 627 6.9E-155 T 11-10-2018 IPR013355 Type IV pilus secretin PilQ XFUD_01575 8ed880f983406165e6c2cc8ac468d7f2 637 Gene3D G3DSA:3.30.1370.120 294 373 8.2E-9 T 11-10-2018 IPR038591 NolW-like superfamily XFUD_01575 8ed880f983406165e6c2cc8ac468d7f2 637 Pfam PF03958 Bacterial type II/III secretion system short domain 296 374 3.0E-12 T 11-10-2018 IPR005644 NolW-like XFUD_01575 8ed880f983406165e6c2cc8ac468d7f2 637 PRINTS PR00811 Bacterial general secretion pathway protein D signature 459 483 5.2E-18 T 11-10-2018 IPR001775 GspD/PilQ family XFUD_01575 8ed880f983406165e6c2cc8ac468d7f2 637 PRINTS PR00811 Bacterial general secretion pathway protein D signature 592 610 5.2E-18 T 11-10-2018 IPR001775 GspD/PilQ family XFUD_01575 8ed880f983406165e6c2cc8ac468d7f2 637 PRINTS PR00811 Bacterial general secretion pathway protein D signature 374 384 5.2E-18 T 11-10-2018 IPR001775 GspD/PilQ family XFUD_01575 8ed880f983406165e6c2cc8ac468d7f2 637 PRINTS PR00811 Bacterial general secretion pathway protein D signature 615 629 5.2E-18 T 11-10-2018 IPR001775 GspD/PilQ family XFUD_01575 8ed880f983406165e6c2cc8ac468d7f2 637 Pfam PF07660 Secretin and TonB N terminus short domain 222 268 1.0E-7 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 XFUD_01575 8ed880f983406165e6c2cc8ac468d7f2 637 Pfam PF00263 Bacterial type II and III secretion system protein 463 628 2.5E-48 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 XFUD_01575 8ed880f983406165e6c2cc8ac468d7f2 637 Gene3D G3DSA:2.60.40.3470 44 169 3.1E-32 T 11-10-2018 XFUD_01575 8ed880f983406165e6c2cc8ac468d7f2 637 SMART SM00965 221 269 8.3E-10 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 XFUD_03480 f2c6cab9ec3e2ddf8743c218e3c0d326 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 1.2E-166 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XFUD_03480 f2c6cab9ec3e2ddf8743c218e3c0d326 467 SUPERFAMILY SSF52374 4 296 9.12E-102 T 11-10-2018 XFUD_03480 f2c6cab9ec3e2ddf8743c218e3c0d326 467 Gene3D G3DSA:3.40.50.620 2 314 3.6E-126 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_03480 f2c6cab9ec3e2ddf8743c218e3c0d326 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 305 2.8E-98 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 XFUD_03480 f2c6cab9ec3e2ddf8743c218e3c0d326 467 SUPERFAMILY SSF48163 299 461 9.16E-38 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XFUD_03480 f2c6cab9ec3e2ddf8743c218e3c0d326 467 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 29.857 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XFUD_03480 f2c6cab9ec3e2ddf8743c218e3c0d326 467 Gene3D G3DSA:1.10.10.350 369 466 3.9E-23 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 XFUD_03480 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 6.2E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFUD_03480 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 6.2E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFUD_03480 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 6.2E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFUD_03480 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 6.2E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFUD_03480 f2c6cab9ec3e2ddf8743c218e3c0d326 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 6.2E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFUD_03480 f2c6cab9ec3e2ddf8743c218e3c0d326 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_11840 f8248ad72747774c2d80a134ee61e8a3 1007 Pfam PF04851 Type III restriction enzyme, res subunit 292 460 5.8E-32 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XFUD_11840 f8248ad72747774c2d80a134ee61e8a3 1007 SMART SM00487 289 490 1.4E-18 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_11840 f8248ad72747774c2d80a134ee61e8a3 1007 SUPERFAMILY SSF52540 249 460 7.58E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11840 f8248ad72747774c2d80a134ee61e8a3 1007 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 37 224 4.1E-46 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 XFUD_11840 f8248ad72747774c2d80a134ee61e8a3 1007 Gene3D G3DSA:1.20.58.2040 755 858 9.6E-29 T 11-10-2018 XFUD_11840 f8248ad72747774c2d80a134ee61e8a3 1007 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 751 1003 1.1E-71 T 11-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal XFUD_11840 f8248ad72747774c2d80a134ee61e8a3 1007 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 43 748 2.2E-168 T 11-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 XFUD_11840 f8248ad72747774c2d80a134ee61e8a3 1007 Gene3D G3DSA:3.90.640.50 63 135 3.0E-98 T 11-10-2018 XFUD_11840 f8248ad72747774c2d80a134ee61e8a3 1007 Gene3D G3DSA:3.90.1570.50 37 285 3.0E-98 T 11-10-2018 XFUD_11840 f8248ad72747774c2d80a134ee61e8a3 1007 Gene3D G3DSA:3.40.50.300 488 754 3.2E-93 T 11-10-2018 XFUD_11840 f8248ad72747774c2d80a134ee61e8a3 1007 Gene3D G3DSA:3.40.50.300 292 487 4.2E-65 T 11-10-2018 XFUD_00855 7926d81f75fe5f4fe416a82be23d7fb0 150 PIRSF PIRSF004638 1 150 1.5E-41 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 XFUD_00855 7926d81f75fe5f4fe416a82be23d7fb0 150 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 150 1.0E-39 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 XFUD_06975 3c053ab44606246c12919a3528700ffd 210 Pfam PF02498 BRO family, N-terminal domain 17 113 9.7E-9 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_06975 3c053ab44606246c12919a3528700ffd 210 SMART SM01040 15 112 1.1E-20 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_00065 68ba72edef848223445b18463b1ce7ab 795 SUPERFAMILY SSF53474 537 794 1.38E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_00065 68ba72edef848223445b18463b1ce7ab 795 Gene3D G3DSA:3.40.50.1820 534 791 2.7E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_00065 68ba72edef848223445b18463b1ce7ab 795 Gene3D G3DSA:2.140.10.30 236 533 2.4E-29 T 11-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily XFUD_00065 68ba72edef848223445b18463b1ce7ab 795 SUPERFAMILY SSF82171 220 538 4.05E-33 T 11-10-2018 XFUD_00065 68ba72edef848223445b18463b1ce7ab 795 Pfam PF00326 Prolyl oligopeptidase family 599 794 7.4E-43 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 XFUD_00065 68ba72edef848223445b18463b1ce7ab 795 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 337 507 1.1E-17 T 11-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 XFUD_09315 43bea81d98ff06a0eca1cd5c31216f8b 210 Hamap MF_00157 Ribonuclease T [rnt]. 1 210 86.241 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 XFUD_09315 43bea81d98ff06a0eca1cd5c31216f8b 210 Gene3D G3DSA:3.30.420.10 12 208 7.7E-47 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFUD_09315 43bea81d98ff06a0eca1cd5c31216f8b 210 SMART SM00479 21 206 3.5E-19 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFUD_09315 43bea81d98ff06a0eca1cd5c31216f8b 210 TIGRFAM TIGR01298 RNaseT: ribonuclease T 13 209 1.0E-111 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 XFUD_09315 43bea81d98ff06a0eca1cd5c31216f8b 210 SUPERFAMILY SSF53098 11 204 5.22E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFUD_09315 43bea81d98ff06a0eca1cd5c31216f8b 210 Pfam PF00929 Exonuclease 23 197 5.1E-24 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFUD_02045 d8bcc92e5143c9dce49ba98dab5ceddb 154 Pfam PF07603 Protein of unknown function (DUF1566) 30 138 4.4E-14 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 XFUD_10655 eda8ebab138288ddf8586b4b9de7074b 204 Pfam PF00005 ABC transporter 18 155 6.8E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_10655 eda8ebab138288ddf8586b4b9de7074b 204 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_10655 eda8ebab138288ddf8586b4b9de7074b 204 SUPERFAMILY SSF52540 4 186 2.08E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_10655 eda8ebab138288ddf8586b4b9de7074b 204 SMART SM00382 25 204 1.6E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_10655 eda8ebab138288ddf8586b4b9de7074b 204 Gene3D G3DSA:3.40.50.300 1 203 2.6E-40 T 11-10-2018 XFUD_10655 eda8ebab138288ddf8586b4b9de7074b 204 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 1 199 3.9E-76 T 11-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 XFUD_11550 9a3230bd70c481f620729f3c0e78f689 298 Gene3D G3DSA:3.30.230.10 8 174 5.2E-51 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFUD_11550 9a3230bd70c481f620729f3c0e78f689 298 SUPERFAMILY SSF54211 20 172 1.06E-40 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_11550 9a3230bd70c481f620729f3c0e78f689 298 Pfam PF08544 GHMP kinases C terminal 223 272 1.2E-4 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain XFUD_11550 9a3230bd70c481f620729f3c0e78f689 298 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 19 290 2.1E-64 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 XFUD_11550 9a3230bd70c481f620729f3c0e78f689 298 SUPERFAMILY SSF55060 175 292 5.04E-22 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XFUD_11550 9a3230bd70c481f620729f3c0e78f689 298 Gene3D G3DSA:3.30.70.890 176 294 7.6E-21 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XFUD_11550 9a3230bd70c481f620729f3c0e78f689 298 PIRSF PIRSF010376 16 294 1.4E-76 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 XFUD_11550 9a3230bd70c481f620729f3c0e78f689 298 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 18 286 29.878 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 XFUD_11550 9a3230bd70c481f620729f3c0e78f689 298 Pfam PF00288 GHMP kinases N terminal domain 101 158 8.4E-9 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 Gene3D G3DSA:1.10.730.10 378 539 5.3E-31 T 11-10-2018 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 566 689 1.8E-37 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 Pfam PF01588 Putative tRNA binding domain 593 687 3.5E-20 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 Pfam PF09334 tRNA synthetases class I (M) 5 394 1.2E-148 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 Gene3D G3DSA:2.40.50.140 577 689 5.5E-29 T 11-10-2018 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 SUPERFAMILY SSF50249 583 689 1.22E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 Gene3D G3DSA:2.20.28.20 138 172 3.9E-142 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 SUPERFAMILY SSF57770 138 172 1.83E-12 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 545 38.48 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 535 7.1E-160 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 SUPERFAMILY SSF47323 387 547 1.59E-39 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 SUPERFAMILY SSF52374 4 382 6.57E-88 T 11-10-2018 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 Gene3D G3DSA:3.40.50.620 5 377 3.9E-142 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 2.7E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 2.7E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 86 97 2.7E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 249 260 2.7E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 38 52 2.7E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFUD_02310 ec21d38fac71ccd0ae729bbc47eba45d 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 288 303 2.7E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 XFUD_00495 a469725ccfce0ba0b4864beb715b3e47 343 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 210 230 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 XFUD_00495 a469725ccfce0ba0b4864beb715b3e47 343 SUPERFAMILY SSF51412 10 314 4.43E-43 T 11-10-2018 XFUD_00495 a469725ccfce0ba0b4864beb715b3e47 343 Gene3D G3DSA:3.20.20.70 6 343 1.8E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_00495 a469725ccfce0ba0b4864beb715b3e47 343 Pfam PF03060 Nitronate monooxygenase 12 339 2.0E-66 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 XFUD_11230 6a540637f91976a016300b6d03cf95f2 351 SUPERFAMILY SSF56194 219 349 5.62E-44 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_11230 6a540637f91976a016300b6d03cf95f2 351 SUPERFAMILY SSF56176 18 203 5.12E-35 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XFUD_11230 6a540637f91976a016300b6d03cf95f2 351 Pfam PF01565 FAD binding domain 52 163 2.8E-15 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 XFUD_11230 6a540637f91976a016300b6d03cf95f2 351 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 351 77.814 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_11230 6a540637f91976a016300b6d03cf95f2 351 Gene3D G3DSA:3.90.78.10 236 351 7.0E-42 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_11230 6a540637f91976a016300b6d03cf95f2 351 Gene3D G3DSA:3.30.43.10 11 80 6.4E-15 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 XFUD_11230 6a540637f91976a016300b6d03cf95f2 351 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 18 348 3.3E-64 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_11230 6a540637f91976a016300b6d03cf95f2 351 Gene3D G3DSA:3.30.465.10 83 235 4.7E-51 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XFUD_11230 6a540637f91976a016300b6d03cf95f2 351 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 223 347 6.7E-33 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_03690 9679456a6616c3ae58c0dd9ca0678442 334 Pfam PF00005 ABC transporter 21 168 8.2E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_03690 9679456a6616c3ae58c0dd9ca0678442 334 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_03690 9679456a6616c3ae58c0dd9ca0678442 334 Gene3D G3DSA:3.30.70.260 242 333 1.8E-14 T 11-10-2018 XFUD_03690 9679456a6616c3ae58c0dd9ca0678442 334 SUPERFAMILY SSF52540 1 239 4.54E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_03690 9679456a6616c3ae58c0dd9ca0678442 334 Gene3D G3DSA:3.40.50.300 1 241 8.0E-73 T 11-10-2018 XFUD_03690 9679456a6616c3ae58c0dd9ca0678442 334 SMART SM00382 30 216 1.6E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_03690 9679456a6616c3ae58c0dd9ca0678442 334 SMART SM00930 259 332 1.1E-23 T 11-10-2018 IPR018449 NIL domain XFUD_03690 9679456a6616c3ae58c0dd9ca0678442 334 Pfam PF09383 NIL domain 261 330 8.4E-17 T 11-10-2018 IPR018449 NIL domain XFUD_03690 9679456a6616c3ae58c0dd9ca0678442 334 SUPERFAMILY SSF55021 259 332 1.14E-14 T 11-10-2018 XFUD_07420 efb140d8e640e76d5c6d5f5741b6821d 356 Gene3D G3DSA:3.20.20.70 1 355 6.2E-120 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_07420 efb140d8e640e76d5c6d5f5741b6821d 356 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 1 331 7.5E-79 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 XFUD_07420 efb140d8e640e76d5c6d5f5741b6821d 356 SUPERFAMILY SSF51395 1 353 2.11E-111 T 11-10-2018 XFUD_02535 6bef0846672048fa714d2b038638a4c2 848 Gene3D G3DSA:3.40.50.2000 17 398 7.1E-53 T 11-10-2018 XFUD_02535 6bef0846672048fa714d2b038638a4c2 848 Gene3D G3DSA:3.40.50.2000 641 813 2.1E-28 T 11-10-2018 XFUD_02535 6bef0846672048fa714d2b038638a4c2 848 SUPERFAMILY SSF53756 467 827 4.55E-41 T 11-10-2018 XFUD_02535 6bef0846672048fa714d2b038638a4c2 848 Gene3D G3DSA:3.40.50.2000 199 383 7.1E-53 T 11-10-2018 XFUD_02535 6bef0846672048fa714d2b038638a4c2 848 Pfam PF13439 Glycosyltransferase Family 4 19 192 6.0E-11 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XFUD_02535 6bef0846672048fa714d2b038638a4c2 848 Pfam PF00534 Glycosyl transferases group 1 222 382 1.9E-25 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 XFUD_02535 6bef0846672048fa714d2b038638a4c2 848 Pfam PF00534 Glycosyl transferases group 1 656 804 4.7E-23 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 XFUD_02535 6bef0846672048fa714d2b038638a4c2 848 SUPERFAMILY SSF53756 17 402 6.8E-62 T 11-10-2018 XFUD_01895 1915458291b6663de35115109ff36258 430 Gene3D G3DSA:3.40.440.10 6 249 9.6E-98 T 11-10-2018 XFUD_01895 1915458291b6663de35115109ff36258 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XFUD_01895 1915458291b6663de35115109ff36258 430 Gene3D G3DSA:3.90.170.10 267 430 2.3E-68 T 11-10-2018 XFUD_01895 1915458291b6663de35115109ff36258 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XFUD_01895 1915458291b6663de35115109ff36258 430 SUPERFAMILY SSF52540 4 429 2.02E-173 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01895 1915458291b6663de35115109ff36258 430 SMART SM00788 4 424 1.2E-286 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XFUD_01895 1915458291b6663de35115109ff36258 430 Pfam PF00709 Adenylosuccinate synthetase 5 423 2.1E-175 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XFUD_01895 1915458291b6663de35115109ff36258 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 205.799 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XFUD_01895 1915458291b6663de35115109ff36258 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 2.4E-173 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 XFUD_01895 1915458291b6663de35115109ff36258 430 Gene3D G3DSA:1.10.300.10 102 201 9.6E-98 T 11-10-2018 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 SUPERFAMILY SSF82693 136 322 2.62E-15 T 11-10-2018 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 SUPERFAMILY SSF82714 710 796 2.49E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:3.30.2090.10 709 798 1.0E-235 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:3.30.70.1440 658 855 1.0E-235 T 11-10-2018 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 SUPERFAMILY SSF82693 42 132 3.66E-14 T 11-10-2018 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 SUPERFAMILY SSF82714 182 264 9.81E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 3.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 3.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 3.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 3.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:1.20.1640.10 13 504 1.0E-235 T 11-10-2018 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 SUPERFAMILY SSF82866 292 491 3.53E-39 T 11-10-2018 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:3.30.70.1320 134 328 1.0E-235 T 11-10-2018 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:3.30.70.1430 556 657 1.0E-235 T 11-10-2018 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 SUPERFAMILY SSF82866 796 1016 1.29E-47 T 11-10-2018 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:3.30.2090.10 177 270 1.0E-235 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:3.30.70.1430 40 806 1.0E-235 T 11-10-2018 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 Pfam PF00873 AcrB/AcrD/AcrF family 12 1011 2.1E-160 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_01055 b70885caed93b748fe158e1e7c3efff4 1027 Gene3D G3DSA:1.20.1640.10 505 1009 1.0E-235 T 11-10-2018 XFUD_00740 063c80df711e69827b1d7d1c77177ff9 246 SUPERFAMILY SSF51735 11 245 5.82E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_00740 063c80df711e69827b1d7d1c77177ff9 246 Gene3D G3DSA:3.40.50.720 8 246 1.4E-71 T 11-10-2018 XFUD_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 5.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 5.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00740 063c80df711e69827b1d7d1c77177ff9 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00740 063c80df711e69827b1d7d1c77177ff9 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 245 1.3E-51 T 11-10-2018 XFUD_00740 063c80df711e69827b1d7d1c77177ff9 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 193 2.0E-6 T 11-10-2018 XFUD_09885 c5e30e6ff7dba779c07e424a922eb315 236 Pfam PF02677 Uncharacterized BCR, COG1636 19 193 6.2E-64 T 11-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 XFUD_09885 c5e30e6ff7dba779c07e424a922eb315 236 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 19 195 33.557 T 11-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 XFUD_11110 7829c2662b1776f1bafa20790b743c01 536 SMART SM00388 314 380 6.5E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_11110 7829c2662b1776f1bafa20790b743c01 536 SMART SM00387 422 531 1.2E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_11110 7829c2662b1776f1bafa20790b743c01 536 Gene3D G3DSA:3.30.565.10 375 529 8.4E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_11110 7829c2662b1776f1bafa20790b743c01 536 Pfam PF00512 His Kinase A (phospho-acceptor) domain 314 378 6.8E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_11110 7829c2662b1776f1bafa20790b743c01 536 SUPERFAMILY SSF47384 313 378 5.89E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFUD_11110 7829c2662b1776f1bafa20790b743c01 536 Gene3D G3DSA:3.30.450.20 188 291 9.6E-6 T 11-10-2018 XFUD_11110 7829c2662b1776f1bafa20790b743c01 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 5.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_11110 7829c2662b1776f1bafa20790b743c01 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 528 5.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_11110 7829c2662b1776f1bafa20790b743c01 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 490 5.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_11110 7829c2662b1776f1bafa20790b743c01 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 509 5.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_11110 7829c2662b1776f1bafa20790b743c01 536 Gene3D G3DSA:1.10.287.130 304 374 5.4E-15 T 11-10-2018 XFUD_11110 7829c2662b1776f1bafa20790b743c01 536 SUPERFAMILY SSF55874 372 528 3.8E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_11110 7829c2662b1776f1bafa20790b743c01 536 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 528 2.0E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_07415 662fe0aadd647410c4cb7dae5deaa531 305 Gene3D G3DSA:1.10.10.10 1 88 1.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_07415 662fe0aadd647410c4cb7dae5deaa531 305 Gene3D G3DSA:3.40.190.10 90 295 5.3E-59 T 11-10-2018 XFUD_07415 662fe0aadd647410c4cb7dae5deaa531 305 Gene3D G3DSA:3.40.190.10 162 269 5.3E-59 T 11-10-2018 XFUD_07415 662fe0aadd647410c4cb7dae5deaa531 305 SUPERFAMILY SSF46785 1 110 1.32E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_07415 662fe0aadd647410c4cb7dae5deaa531 305 SUPERFAMILY SSF53850 86 300 4.89E-39 T 11-10-2018 XFUD_07415 662fe0aadd647410c4cb7dae5deaa531 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.1E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_07415 662fe0aadd647410c4cb7dae5deaa531 305 Pfam PF03466 LysR substrate binding domain 87 298 1.1E-41 T 11-10-2018 IPR005119 LysR, substrate-binding XFUD_09870 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_09870 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_09870 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_09870 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 104 120 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_09870 44732b4b0cd1a8c83a8847619fe13b47 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_09870 44732b4b0cd1a8c83a8847619fe13b47 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 153 250 3.6E-15 T 11-10-2018 XFUD_09870 44732b4b0cd1a8c83a8847619fe13b47 255 Pfam PF00106 short chain dehydrogenase 6 121 2.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_09870 44732b4b0cd1a8c83a8847619fe13b47 255 Gene3D G3DSA:3.40.50.720 1 252 3.5E-45 T 11-10-2018 XFUD_09870 44732b4b0cd1a8c83a8847619fe13b47 255 SUPERFAMILY SSF51735 5 253 8.61E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_08665 8ac643a3013df501251a64d0374c10a2 362 Gene3D G3DSA:3.30.470.10 28 356 2.1E-130 T 11-10-2018 XFUD_08665 8ac643a3013df501251a64d0374c10a2 362 Pfam PF01063 Amino-transferase class IV 73 316 1.6E-33 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 XFUD_08665 8ac643a3013df501251a64d0374c10a2 362 Gene3D G3DSA:3.20.10.10 174 343 2.1E-130 T 11-10-2018 XFUD_08665 8ac643a3013df501251a64d0374c10a2 362 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 47 359 8.8E-147 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 XFUD_08665 8ac643a3013df501251a64d0374c10a2 362 ProSitePatterns PS00770 Aminotransferases class-IV signature. 236 266 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 XFUD_08665 8ac643a3013df501251a64d0374c10a2 362 PIRSF PIRSF006468 4 362 2.0E-130 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 XFUD_08665 8ac643a3013df501251a64d0374c10a2 362 SUPERFAMILY SSF56752 3 357 5.36E-111 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 8.5E-235 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 Gene3D G3DSA:3.30.499.10 333 474 4.6E-49 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 SUPERFAMILY SSF53732 3 472 5.49E-162 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 473 61.332 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 Gene3D G3DSA:3.30.499.20 6 292 2.1E-95 T 11-10-2018 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 139 154 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 201 214 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 125 138 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 349 360 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 406 419 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 215 228 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 88 101 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 114 122 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 PRINTS PR00415 Aconitase family signature 292 306 3.0E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_10310 49362e44be7c2a27604ed4ff50e0b21a 474 Pfam PF00330 Aconitase family (aconitate hydratase) 9 464 8.7E-156 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Pfam PF04560 RNA polymerase Rpb2, domain 7 1308 1382 6.9E-27 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Pfam PF04565 RNA polymerase Rpb2, domain 3 541 608 5.1E-27 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1104 1116 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:3.90.1110.10 327 468 4.2E-28 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:2.40.50.100 742 817 3.4E-29 T 11-10-2018 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Pfam PF04563 RNA polymerase beta subunit 28 527 7.7E-42 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:2.40.270.10 819 861 1.5E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Pfam PF04561 RNA polymerase Rpb2, domain 2 450 482 3.7E-5 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Pfam PF04561 RNA polymerase Rpb2, domain 2 157 227 4.2E-8 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1381 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Pfam PF10385 RNA polymerase beta subunit external 1 domain 619 684 2.9E-23 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:2.40.50.150 862 985 8.1E-44 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Pfam PF00562 RNA polymerase Rpb2, domain 6 746 1306 1.0E-158 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:3.90.1800.10 1294 1345 7.2E-11 T 11-10-2018 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:2.40.270.10 1076 1284 2.4E-85 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 14 1384 12.279 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:3.90.1100.10 19 177 2.5E-55 T 11-10-2018 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:3.90.1100.10 674 741 9.1E-21 T 11-10-2018 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 SUPERFAMILY SSF64484 13 1382 0.0 T 11-10-2018 XFUD_11465 a57e490ddf4403b0d915ffd71d6196a8 1384 Gene3D G3DSA:3.90.1100.10 469 658 9.4E-67 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF03895 YadA-like membrane anchor domain 1130 1190 2.2E-18 T 11-10-2018 IPR005594 YadA-like, C-terminal XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1017 1043 1.6E-5 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05658 Head domain of trimeric autotransporter adhesin 897 923 1.3E-7 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05658 Head domain of trimeric autotransporter adhesin 869 895 2.6E-4 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF101967 1010 1096 7.72E-24 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF101967 176 338 4.45E-17 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:2.150.10.10 153 337 4.0E-28 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:2.150.10.10 992 1093 4.6E-28 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:3.30.1300.30 1094 1190 1.7E-31 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1075 1112 1.2E-9 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 568 609 2.1E-14 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 318 359 8.0E-9 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 818 847 1.4E-11 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 443 484 3.6E-11 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 693 734 1.8E-14 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 961 994 5.7E-8 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF101967 608 715 6.54E-15 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF101967 343 467 2.62E-13 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:2.150.10.10 839 990 3.8E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF101967 843 983 4.71E-16 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:3.30.390.90 659 698 4.6E-14 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:3.30.390.90 786 823 4.7E-14 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:3.30.390.90 534 573 4.8E-14 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:3.30.390.90 396 447 3.0E-10 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF54523 1086 1190 9.42E-24 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:2.20.25.490 338 394 3.2E-16 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:2.20.25.490 585 644 1.1E-15 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:2.20.25.490 709 770 3.4E-15 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 Gene3D G3DSA:2.20.25.490 462 519 1.6E-14 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF101967 722 840 7.72E-14 T 11-10-2018 XFUD_08585 5e7b7302c4c9d399f0d42a5575b924c9 1190 SUPERFAMILY SSF101967 471 590 7.32E-15 T 11-10-2018 XFUD_10720 7fdb1139cbcf2027042c3d1b89b16662 246 SUPERFAMILY SSF53335 18 233 2.5E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_10720 7fdb1139cbcf2027042c3d1b89b16662 246 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 16 239 37.048 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 XFUD_10720 7fdb1139cbcf2027042c3d1b89b16662 246 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 233 1.7E-85 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 XFUD_10720 7fdb1139cbcf2027042c3d1b89b16662 246 Pfam PF13489 Methyltransferase domain 54 207 5.3E-24 T 11-10-2018 XFUD_10720 7fdb1139cbcf2027042c3d1b89b16662 246 Gene3D G3DSA:3.40.50.150 16 238 8.1E-77 T 11-10-2018 XFUD_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 SUPERFAMILY SSF160113 355 404 9.55E-9 T 11-10-2018 IPR036913 YegP-like superfamily XFUD_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 5.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XFUD_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 5.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XFUD_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 5.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XFUD_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 5.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XFUD_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 333 35.196 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 XFUD_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 SUPERFAMILY SSF52374 3 332 3.03E-75 T 11-10-2018 XFUD_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 332 2.3E-81 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 XFUD_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 Pfam PF00579 tRNA synthetases class I (W and Y) 3 279 1.4E-52 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 Gene3D G3DSA:3.40.50.620 4 332 2.3E-106 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_01785 83b4c80fe4b358c9f42e9fb8852321ae 430 Gene3D G3DSA:1.10.240.10 197 299 2.3E-106 T 11-10-2018 XFUD_02335 54d1b81105c171f0c597f958f0551aa8 341 Pfam PF03193 RsgA GTPase 96 270 7.1E-45 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 XFUD_02335 54d1b81105c171f0c597f958f0551aa8 341 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 38 333 30.675 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 XFUD_02335 54d1b81105c171f0c597f958f0551aa8 341 SUPERFAMILY SSF52540 113 328 4.62E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_02335 54d1b81105c171f0c597f958f0551aa8 341 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 81 325 4.6E-43 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 XFUD_02335 54d1b81105c171f0c597f958f0551aa8 341 Gene3D G3DSA:3.40.50.300 99 270 7.1E-44 T 11-10-2018 XFUD_02335 54d1b81105c171f0c597f958f0551aa8 341 Gene3D G3DSA:1.10.40.50 271 339 2.3E-18 T 11-10-2018 XFUD_05940 e3d64d33550abfb0225b68578f00f075 182 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 152 1.2E-5 T 11-10-2018 XFUD_05940 e3d64d33550abfb0225b68578f00f075 182 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 20 171 5.1E-34 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XFUD_05940 e3d64d33550abfb0225b68578f00f075 182 Gene3D G3DSA:3.40.50.1000 1 182 2.0E-47 T 11-10-2018 IPR023214 HAD superfamily XFUD_05940 e3d64d33550abfb0225b68578f00f075 182 PIRSF PIRSF006118 7 181 2.4E-65 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XFUD_05940 e3d64d33550abfb0225b68578f00f075 182 SUPERFAMILY SSF56784 17 176 2.85E-33 T 11-10-2018 IPR036412 HAD-like superfamily XFUD_04960 5a85c1e97661854bfd08f4193679e02a 147 Gene3D G3DSA:3.100.10.10 74 147 2.9E-6 T 11-10-2018 XFUD_04960 5a85c1e97661854bfd08f4193679e02a 147 SUPERFAMILY SSF52080 6 145 2.09E-33 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily XFUD_04960 5a85c1e97661854bfd08f4193679e02a 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 145 3.5E-22 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P XFUD_04960 5a85c1e97661854bfd08f4193679e02a 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 147 15.628 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 XFUD_04960 5a85c1e97661854bfd08f4193679e02a 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 145 4.0E-39 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_09880 56e2d56e5556c1c7560592b3782aaa05 758 SUPERFAMILY SSF51726 5 393 6.54E-112 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XFUD_09880 56e2d56e5556c1c7560592b3782aaa05 758 SUPERFAMILY SSF51726 396 757 1.7E-121 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XFUD_09880 56e2d56e5556c1c7560592b3782aaa05 758 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 758 37.715 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XFUD_09880 56e2d56e5556c1c7560592b3782aaa05 758 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XFUD_09880 56e2d56e5556c1c7560592b3782aaa05 758 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 310 1.4E-120 T 11-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XFUD_09880 56e2d56e5556c1c7560592b3782aaa05 758 PIRSF PIRSF000382 1 758 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XFUD_09880 56e2d56e5556c1c7560592b3782aaa05 758 Gene3D G3DSA:3.20.20.210 6 524 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XFUD_09880 56e2d56e5556c1c7560592b3782aaa05 758 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 758 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XFUD_09880 56e2d56e5556c1c7560592b3782aaa05 758 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 432 753 6.9E-156 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 XFUD_06260 9fa63bf630a64b004732b1b8289807d5 459 SUPERFAMILY SSF52540 11 457 2.67E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_06260 9fa63bf630a64b004732b1b8289807d5 459 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 351 420 2.3E-8 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFUD_06260 9fa63bf630a64b004732b1b8289807d5 459 SMART SM01086 351 450 2.8E-27 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFUD_06260 9fa63bf630a64b004732b1b8289807d5 459 Gene3D G3DSA:1.10.8.60 351 456 5.8E-40 T 11-10-2018 XFUD_06260 9fa63bf630a64b004732b1b8289807d5 459 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 61 107 3.6E-6 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFUD_06260 9fa63bf630a64b004732b1b8289807d5 459 Pfam PF07724 AAA domain (Cdc48 subfamily) 199 345 3.8E-40 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFUD_06260 9fa63bf630a64b004732b1b8289807d5 459 SMART SM00382 57 348 7.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_06260 9fa63bf630a64b004732b1b8289807d5 459 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 9 459 44.062 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 XFUD_06260 9fa63bf630a64b004732b1b8289807d5 459 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 12 459 9.3E-202 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 XFUD_09695 f7e78601f1c3d0a818bff89dd1712ac0 322 Pfam PF08544 GHMP kinases C terminal 227 300 3.4E-12 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain XFUD_09695 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 188 205 7.4E-23 T 11-10-2018 XFUD_09695 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 113 128 7.4E-23 T 11-10-2018 XFUD_09695 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 153 166 7.4E-23 T 11-10-2018 XFUD_09695 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 267 282 7.4E-23 T 11-10-2018 XFUD_09695 f7e78601f1c3d0a818bff89dd1712ac0 322 PRINTS PR00958 Homoserine kinase signature 28 43 7.4E-23 T 11-10-2018 XFUD_09695 f7e78601f1c3d0a818bff89dd1712ac0 322 PIRSF PIRSF000676 17 321 2.6E-82 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 XFUD_09695 f7e78601f1c3d0a818bff89dd1712ac0 322 SUPERFAMILY SSF54211 22 175 2.2E-26 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_09695 f7e78601f1c3d0a818bff89dd1712ac0 322 SUPERFAMILY SSF55060 187 301 2.64E-24 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XFUD_09695 f7e78601f1c3d0a818bff89dd1712ac0 322 Gene3D G3DSA:3.30.230.10 15 179 1.5E-42 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFUD_09695 f7e78601f1c3d0a818bff89dd1712ac0 322 Hamap MF_00384 Homoserine kinase [thrB]. 23 322 25.914 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 XFUD_09695 f7e78601f1c3d0a818bff89dd1712ac0 322 Pfam PF00288 GHMP kinases N terminal domain 100 166 4.1E-12 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 XFUD_09695 f7e78601f1c3d0a818bff89dd1712ac0 322 Gene3D G3DSA:3.30.70.890 180 313 3.5E-31 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily XFUD_09695 f7e78601f1c3d0a818bff89dd1712ac0 322 TIGRFAM TIGR00191 thrB: homoserine kinase 25 290 4.3E-51 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 XFUD_03280 00777653d516674e92b589b66b8c0d8a 326 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 96 251 2.1E-4 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XFUD_03280 00777653d516674e92b589b66b8c0d8a 326 PIRSF PIRSF028561 1 321 2.2E-166 T 11-10-2018 IPR014548 Predicted acyltransferase XFUD_00205 e784dacea2191cfb6acd3ecea5d21d15 455 SMART SM00878 336 441 2.5E-62 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XFUD_00205 e784dacea2191cfb6acd3ecea5d21d15 455 SUPERFAMILY SSF52440 1 113 1.01E-46 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XFUD_00205 e784dacea2191cfb6acd3ecea5d21d15 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.5E-44 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XFUD_00205 e784dacea2191cfb6acd3ecea5d21d15 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.6E-37 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XFUD_00205 e784dacea2191cfb6acd3ecea5d21d15 455 Gene3D G3DSA:3.30.1490.20 131 203 4.4E-153 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XFUD_00205 e784dacea2191cfb6acd3ecea5d21d15 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 2.3E-83 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFUD_00205 e784dacea2191cfb6acd3ecea5d21d15 455 Gene3D G3DSA:3.40.50.20 1 85 1.5E-34 T 11-10-2018 XFUD_00205 e784dacea2191cfb6acd3ecea5d21d15 455 SUPERFAMILY SSF56059 83 343 8.13E-67 T 11-10-2018 XFUD_00205 e784dacea2191cfb6acd3ecea5d21d15 455 SUPERFAMILY SSF51246 331 444 3.56E-42 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 XFUD_00205 e784dacea2191cfb6acd3ecea5d21d15 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFUD_00205 e784dacea2191cfb6acd3ecea5d21d15 455 Gene3D G3DSA:3.30.470.20 86 431 4.4E-153 T 11-10-2018 XFUD_00205 e784dacea2191cfb6acd3ecea5d21d15 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFUD_00205 e784dacea2191cfb6acd3ecea5d21d15 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 7.1E-229 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 XFUD_08195 33cd88ac7880f188cdf8d51a2efac525 217 Gene3D G3DSA:3.20.20.70 7 211 2.8E-36 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_08195 33cd88ac7880f188cdf8d51a2efac525 217 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 8 214 36.515 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 XFUD_08195 33cd88ac7880f188cdf8d51a2efac525 217 Pfam PF04055 Radical SAM superfamily 31 108 9.5E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XFUD_08195 33cd88ac7880f188cdf8d51a2efac525 217 SUPERFAMILY SSF102114 31 108 1.44E-15 T 11-10-2018 XFUD_08195 33cd88ac7880f188cdf8d51a2efac525 217 Pfam PF13394 4Fe-4S single cluster domain 29 110 3.1E-10 T 11-10-2018 XFUD_08195 33cd88ac7880f188cdf8d51a2efac525 217 PIRSF PIRSF000370 6 217 5.8E-66 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 XFUD_08195 33cd88ac7880f188cdf8d51a2efac525 217 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 217 6.7E-110 T 11-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE XFUD_09460 891ba5f64461b706bc28eaecd8a53bcb 415 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 18 219 24.231 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 XFUD_09460 891ba5f64461b706bc28eaecd8a53bcb 415 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 129 238 1.2E-43 T 11-10-2018 IPR012997 Rare lipoprotein A XFUD_09460 891ba5f64461b706bc28eaecd8a53bcb 415 Pfam PF03330 Lytic transglycolase 128 216 3.3E-23 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain XFUD_09460 891ba5f64461b706bc28eaecd8a53bcb 415 Gene3D G3DSA:2.40.40.10 126 220 5.4E-35 T 11-10-2018 IPR036908 RlpA-like domain superfamily XFUD_09460 891ba5f64461b706bc28eaecd8a53bcb 415 SUPERFAMILY SSF110997 342 408 6.8E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XFUD_09460 891ba5f64461b706bc28eaecd8a53bcb 415 SUPERFAMILY SSF50685 127 217 2.79E-9 T 11-10-2018 IPR036908 RlpA-like domain superfamily XFUD_09460 891ba5f64461b706bc28eaecd8a53bcb 415 Pfam PF05036 Sporulation related domain 343 403 1.1E-7 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 XFUD_05095 18b07be6c1ca3170d98770e84a99385f 160 SUPERFAMILY SSF52218 1 151 1.8E-25 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFUD_05095 18b07be6c1ca3170d98770e84a99385f 160 TIGRFAM TIGR01754 flav_RNR: putative ribonucleotide reductase-associated flavodoxin 1 144 5.9E-74 T 11-10-2018 IPR010088 Ribonucleotide reductase-associated flavodoxin, putative XFUD_05095 18b07be6c1ca3170d98770e84a99385f 160 Gene3D G3DSA:3.40.50.360 2 147 1.8E-16 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFUD_05095 18b07be6c1ca3170d98770e84a99385f 160 Pfam PF00258 Flavodoxin 8 122 1.2E-7 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 XFUD_10125 f07d4e6f8149f6020dc4d34579727c31 513 Pfam PF00561 alpha/beta hydrolase fold 102 329 3.9E-16 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFUD_10125 f07d4e6f8149f6020dc4d34579727c31 513 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 103 111 1.9E-5 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XFUD_10125 f07d4e6f8149f6020dc4d34579727c31 513 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 134 145 1.9E-5 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XFUD_10125 f07d4e6f8149f6020dc4d34579727c31 513 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 214 228 1.9E-5 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XFUD_10125 f07d4e6f8149f6020dc4d34579727c31 513 SUPERFAMILY SSF53474 93 469 5.4E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_10125 f07d4e6f8149f6020dc4d34579727c31 513 Pfam PF08386 TAP-like protein 396 495 3.9E-20 T 11-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal XFUD_00690 4dfc22ebf50d8e663adfde41e63a0793 471 SUPERFAMILY SSF51261 171 418 1.1E-69 T 11-10-2018 IPR011055 Duplicated hybrid motif XFUD_00690 4dfc22ebf50d8e663adfde41e63a0793 471 Pfam PF01551 Peptidase family M23 320 416 8.8E-33 T 11-10-2018 IPR016047 Peptidase M23 XFUD_00690 4dfc22ebf50d8e663adfde41e63a0793 471 Pfam PF04225 Opacity-associated protein A LysM-like domain 97 164 2.7E-6 T 11-10-2018 IPR007340 Opacity-associated protein A XFUD_00690 4dfc22ebf50d8e663adfde41e63a0793 471 Gene3D G3DSA:3.10.450.350 89 178 1.2E-13 T 11-10-2018 XFUD_00690 4dfc22ebf50d8e663adfde41e63a0793 471 Gene3D G3DSA:2.70.70.10 293 422 4.0E-86 T 11-10-2018 IPR011055 Duplicated hybrid motif XFUD_00690 4dfc22ebf50d8e663adfde41e63a0793 471 Gene3D G3DSA:3.10.450.350 196 437 4.0E-86 T 11-10-2018 XFUD_05770 294d1f45226af5af87f5e3fb460bab22 598 Gene3D G3DSA:1.20.58.2200 549 597 2.0E-12 T 11-10-2018 IPR038440 FimV, C-terminal domain superfamily XFUD_05770 294d1f45226af5af87f5e3fb460bab22 598 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 229 302 5.7E-20 T 11-10-2018 IPR020012 Motility protein FimV, N-terminal XFUD_05770 294d1f45226af5af87f5e3fb460bab22 598 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 555 597 5.3E-15 T 11-10-2018 IPR020011 Motility protein FimV, C-terminal XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 Gene3D G3DSA:3.30.56.50 3 52 2.2E-10 T 11-10-2018 XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 Gene3D G3DSA:3.40.50.10050 686 792 9.2E-33 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 SUPERFAMILY SSF46955 4 52 4.21E-9 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 Pfam PF00009 Elongation factor Tu GTP binding domain 396 551 1.8E-32 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 309 892 1.2E-240 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 69 105 6.3E-9 T 11-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 SUPERFAMILY SSF52156 676 799 3.79E-33 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 Gene3D G3DSA:2.40.30.10 793 891 1.7E-30 T 11-10-2018 XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 315 365 1.3E-13 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 394 549 6.3E-30 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 Gene3D G3DSA:3.40.50.300 389 561 2.8E-67 T 11-10-2018 XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 890 16.588 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 ProSitePatterns PS01176 Initiation factor 2 signature. 843 865 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 Pfam PF11987 Translation-initiation factor 2 678 782 3.8E-33 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 SUPERFAMILY SSF52540 383 556 1.23E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 Gene3D G3DSA:2.40.30.10 562 679 7.3E-39 T 11-10-2018 XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 SUPERFAMILY SSF50447 794 890 3.53E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFUD_01010 576daf0608bb1482be1674ea25befd9a 892 SUPERFAMILY SSF50447 564 647 1.85E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82714 182 272 3.27E-23 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:3.30.70.1430 567 666 0.0 T 11-10-2018 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 11-10-2018 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:3.30.70.1440 667 865 0.0 T 11-10-2018 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:3.30.70.1320 133 330 0.0 T 11-10-2018 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:1.20.1640.10 513 1025 0.0 T 11-10-2018 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:3.30.2090.10 717 812 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82693 135 330 4.39E-22 T 11-10-2018 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.8E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.8E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 617 631 1.8E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.8E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.8E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.8E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.8E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 1.8E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.8E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82693 563 664 1.41E-28 T 11-10-2018 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82866 296 497 5.75E-47 T 11-10-2018 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82866 832 1028 8.89E-42 T 11-10-2018 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82714 716 808 3.14E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1040 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 Gene3D G3DSA:3.30.70.1430 38 820 0.0 T 11-10-2018 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82693 665 858 2.2E-23 T 11-10-2018 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09105 1f6a57d3c08846803145edba7b84b624 1055 SUPERFAMILY SSF82693 38 132 1.15E-27 T 11-10-2018 XFUD_10330 63cdb25f72c66d3d02655e0080b379e6 411 Gene3D G3DSA:2.40.420.20 305 374 1.6E-86 T 11-10-2018 XFUD_10330 63cdb25f72c66d3d02655e0080b379e6 411 SUPERFAMILY SSF111369 63 299 8.24E-56 T 11-10-2018 XFUD_10330 63cdb25f72c66d3d02655e0080b379e6 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 374 9.2E-81 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XFUD_10330 63cdb25f72c66d3d02655e0080b379e6 411 Gene3D G3DSA:1.10.287.470 108 181 1.6E-86 T 11-10-2018 XFUD_10330 63cdb25f72c66d3d02655e0080b379e6 411 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 73 294 5.4E-19 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XFUD_10330 63cdb25f72c66d3d02655e0080b379e6 411 Gene3D G3DSA:2.40.30.170 60 304 1.6E-86 T 11-10-2018 XFUD_10330 63cdb25f72c66d3d02655e0080b379e6 411 Gene3D G3DSA:2.40.50.100 73 215 1.6E-86 T 11-10-2018 XFUD_07910 a32bcc954c1e8e84cff4e8abc108758d 143 Gene3D G3DSA:2.20.25.10 1 48 4.6E-24 T 11-10-2018 XFUD_07910 a32bcc954c1e8e84cff4e8abc108758d 143 Pfam PF02566 OsmC-like protein 44 137 2.8E-16 T 11-10-2018 IPR003718 OsmC/Ohr family XFUD_07910 a32bcc954c1e8e84cff4e8abc108758d 143 SUPERFAMILY SSF82784 5 139 2.22E-41 T 11-10-2018 IPR036102 OsmC/Ohr superfamily XFUD_07910 a32bcc954c1e8e84cff4e8abc108758d 143 Gene3D G3DSA:3.30.300.20 49 141 3.0E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta XFUD_07910 a32bcc954c1e8e84cff4e8abc108758d 143 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 8 139 5.0E-52 T 11-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 XFUD_06500 66ab68a8d2399c28ad1f83a96fcfec48 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.337 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid XFUD_06500 66ab68a8d2399c28ad1f83a96fcfec48 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 XFUD_06500 66ab68a8d2399c28ad1f83a96fcfec48 130 SUPERFAMILY SSF54211 6 130 8.34E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_06500 66ab68a8d2399c28ad1f83a96fcfec48 130 Gene3D G3DSA:3.30.230.10 2 130 1.0E-50 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFUD_06500 66ab68a8d2399c28ad1f83a96fcfec48 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 8.6E-45 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 XFUD_06770 300b17fba1af963d28f8b8539731805c 213 Gene3D G3DSA:2.40.50.230 28 126 2.7E-25 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XFUD_03435 2388a72c1b10ca03a266a540147e3088 319 Pfam PF01551 Peptidase family M23 204 298 2.2E-31 T 11-10-2018 IPR016047 Peptidase M23 XFUD_03435 2388a72c1b10ca03a266a540147e3088 319 Gene3D G3DSA:2.70.70.10 148 305 8.1E-45 T 11-10-2018 IPR011055 Duplicated hybrid motif XFUD_03435 2388a72c1b10ca03a266a540147e3088 319 SUPERFAMILY SSF51261 92 302 1.05E-55 T 11-10-2018 IPR011055 Duplicated hybrid motif XFUD_09290 a6ee0b6579ae5152c2b5e44000b03fbd 364 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 53 361 1.3E-122 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 XFUD_09290 a6ee0b6579ae5152c2b5e44000b03fbd 364 Gene3D G3DSA:3.40.190.10 127 303 3.8E-125 T 11-10-2018 XFUD_09290 a6ee0b6579ae5152c2b5e44000b03fbd 364 PIRSF PIRSF002756 4 362 7.3E-106 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 XFUD_09290 a6ee0b6579ae5152c2b5e44000b03fbd 364 SUPERFAMILY SSF53850 53 360 1.51E-96 T 11-10-2018 XFUD_09290 a6ee0b6579ae5152c2b5e44000b03fbd 364 Pfam PF12849 PBP superfamily domain 45 332 6.4E-59 T 11-10-2018 IPR024370 PBP domain XFUD_09290 a6ee0b6579ae5152c2b5e44000b03fbd 364 Gene3D G3DSA:3.40.190.10 54 350 3.8E-125 T 11-10-2018 XFUD_09455 575fe63e0518301323a411fa33f7c5a9 370 SUPERFAMILY SSF53955 60 365 6.65E-81 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_09455 575fe63e0518301323a411fa33f7c5a9 370 Pfam PF13406 Transglycosylase SLT domain 59 360 1.0E-88 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 XFUD_09455 575fe63e0518301323a411fa33f7c5a9 370 Gene3D G3DSA:1.10.8.350 64 244 3.5E-98 T 11-10-2018 XFUD_09455 575fe63e0518301323a411fa33f7c5a9 370 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 362 3.3E-113 T 11-10-2018 IPR011757 Lytic transglycosylase MltB XFUD_09455 575fe63e0518301323a411fa33f7c5a9 370 Gene3D G3DSA:1.10.530.10 98 359 3.5E-98 T 11-10-2018 XFUD_00465 c4b581c4805ff27fb116685b87a8ae6d 258 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFUD_00465 c4b581c4805ff27fb116685b87a8ae6d 258 SUPERFAMILY SSF55920 5 255 6.15E-94 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like XFUD_00465 c4b581c4805ff27fb116685b87a8ae6d 258 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 42.704 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFUD_00465 c4b581c4805ff27fb116685b87a8ae6d 258 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 250 1.2E-99 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFUD_00465 c4b581c4805ff27fb116685b87a8ae6d 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 3.2E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFUD_00465 c4b581c4805ff27fb116685b87a8ae6d 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 3.2E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFUD_00465 c4b581c4805ff27fb116685b87a8ae6d 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 3.2E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFUD_00465 c4b581c4805ff27fb116685b87a8ae6d 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 3.2E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFUD_00465 c4b581c4805ff27fb116685b87a8ae6d 258 Gene3D G3DSA:3.90.230.10 1 256 2.6E-112 T 11-10-2018 XFUD_00465 c4b581c4805ff27fb116685b87a8ae6d 258 Pfam PF00557 Metallopeptidase family M24 12 242 1.9E-54 T 11-10-2018 IPR000994 Peptidase M24 XFUD_00385 4b4f07fd9e54f220e38898ccddc91fde 643 SUPERFAMILY SSF140990 414 612 1.44E-75 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 XFUD_00385 4b4f07fd9e54f220e38898ccddc91fde 643 SMART SM00382 195 334 6.4E-26 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_00385 4b4f07fd9e54f220e38898ccddc91fde 643 Gene3D G3DSA:1.20.58.760 413 610 7.7E-74 T 11-10-2018 XFUD_00385 4b4f07fd9e54f220e38898ccddc91fde 643 SUPERFAMILY SSF52540 158 402 2.49E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00385 4b4f07fd9e54f220e38898ccddc91fde 643 Gene3D G3DSA:3.40.50.300 150 331 7.9E-70 T 11-10-2018 XFUD_00385 4b4f07fd9e54f220e38898ccddc91fde 643 Gene3D G3DSA:1.10.8.60 333 410 3.8E-28 T 11-10-2018 XFUD_00385 4b4f07fd9e54f220e38898ccddc91fde 643 Pfam PF01434 Peptidase family M41 393 603 8.1E-83 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 XFUD_00385 4b4f07fd9e54f220e38898ccddc91fde 643 Pfam PF06480 FtsH Extracellular 9 99 1.6E-8 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 XFUD_00385 4b4f07fd9e54f220e38898ccddc91fde 643 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 199 330 5.9E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFUD_00385 4b4f07fd9e54f220e38898ccddc91fde 643 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 112 604 1.3E-241 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 XFUD_00385 4b4f07fd9e54f220e38898ccddc91fde 643 ProSitePatterns PS00674 AAA-protein family signature. 302 320 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 XFUD_00385 4b4f07fd9e54f220e38898ccddc91fde 643 Gene3D G3DSA:2.40.50.920 34 107 2.1E-5 T 11-10-2018 XFUD_00385 4b4f07fd9e54f220e38898ccddc91fde 643 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 631 37.232 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 XFUD_06395 af73accf36d90172f1314c01951289e5 303 Pfam PF03547 Membrane transport protein 151 293 3.6E-8 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 XFUD_04050 1fc7671d1a4c245d623712aa5d26837d 554 SUPERFAMILY SSF52540 302 523 6.69E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_04050 1fc7671d1a4c245d623712aa5d26837d 554 SUPERFAMILY SSF52540 10 244 8.67E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_04050 1fc7671d1a4c245d623712aa5d26837d 554 Pfam PF12848 ABC transporter 231 307 2.2E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain XFUD_04050 1fc7671d1a4c245d623712aa5d26837d 554 Gene3D G3DSA:3.40.50.300 2 286 1.4E-82 T 11-10-2018 XFUD_04050 1fc7671d1a4c245d623712aa5d26837d 554 Pfam PF00005 ABC transporter 341 474 2.0E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_04050 1fc7671d1a4c245d623712aa5d26837d 554 SMART SM00382 32 237 4.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_04050 1fc7671d1a4c245d623712aa5d26837d 554 SMART SM00382 349 527 6.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_04050 1fc7671d1a4c245d623712aa5d26837d 554 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_04050 1fc7671d1a4c245d623712aa5d26837d 554 Gene3D G3DSA:3.40.50.300 287 548 3.9E-73 T 11-10-2018 XFUD_04050 1fc7671d1a4c245d623712aa5d26837d 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 7.6E-288 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 XFUD_04050 1fc7671d1a4c245d623712aa5d26837d 554 Pfam PF00005 ABC transporter 24 192 3.2E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_09640 81391d324b3175635c7dee8dafee4ef4 206 SUPERFAMILY SSF141734 12 113 1.02E-41 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 XFUD_09640 81391d324b3175635c7dee8dafee4ef4 206 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 1.0E-23 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 XFUD_09640 81391d324b3175635c7dee8dafee4ef4 206 Gene3D G3DSA:3.10.20.400 9 102 4.8E-33 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 XFUD_09640 81391d324b3175635c7dee8dafee4ef4 206 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 2.0E-29 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 XFUD_09640 81391d324b3175635c7dee8dafee4ef4 206 Gene3D G3DSA:1.10.287.1080 115 206 7.1E-25 T 11-10-2018 XFUD_09640 81391d324b3175635c7dee8dafee4ef4 206 SUPERFAMILY SSF101386 117 205 1.13E-19 T 11-10-2018 XFUD_09640 81391d324b3175635c7dee8dafee4ef4 206 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 206 35.065 T 11-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 XFUD_09640 81391d324b3175635c7dee8dafee4ef4 206 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 115 201 17.236 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 XFUD_09640 81391d324b3175635c7dee8dafee4ef4 206 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 119 200 5.4E-26 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 XFUD_09640 81391d324b3175635c7dee8dafee4ef4 206 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 202 5.2E-11 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 XFUD_10435 cfbc6f450290d8b1266dcd8f7f8398cf 1188 SUPERFAMILY SSF52540 265 977 5.48E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_10435 cfbc6f450290d8b1266dcd8f7f8398cf 1188 SUPERFAMILY SSF56024 1010 1176 1.29E-18 T 11-10-2018 XFUD_10435 cfbc6f450290d8b1266dcd8f7f8398cf 1188 Gene3D G3DSA:3.30.870.10 1006 1177 4.4E-20 T 11-10-2018 XFUD_10435 cfbc6f450290d8b1266dcd8f7f8398cf 1188 Pfam PF13091 PLD-like domain 1037 1172 4.0E-12 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XFUD_10435 cfbc6f450290d8b1266dcd8f7f8398cf 1188 Gene3D G3DSA:3.40.50.300 613 770 4.5E-6 T 11-10-2018 XFUD_10435 cfbc6f450290d8b1266dcd8f7f8398cf 1188 Pfam PF13086 AAA domain 269 362 1.0E-7 T 11-10-2018 XFUD_10435 cfbc6f450290d8b1266dcd8f7f8398cf 1188 PIRSF PIRSF026306 1 1181 0.0 T 11-10-2018 IPR016834 Uncharacterised conserved protein UCP026306 XFUD_10435 cfbc6f450290d8b1266dcd8f7f8398cf 1188 Gene3D G3DSA:3.40.50.300 800 1001 1.9E-32 T 11-10-2018 XFUD_10435 cfbc6f450290d8b1266dcd8f7f8398cf 1188 Pfam PF13087 AAA domain 790 980 2.4E-24 T 11-10-2018 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Pfam PF02824 TGS domain 2 62 3.5E-9 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.30.54.20 131 188 3.9E-59 T 11-10-2018 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SUPERFAMILY SSF55681 244 527 1.57E-93 T 11-10-2018 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SUPERFAMILY SSF55186 65 242 9.16E-62 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.40.50.800 533 634 1.2E-32 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SMART SM00863 171 220 1.9E-20 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 1.4E-14 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 2.0E-217 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.30.930.10 224 532 3.0E-123 T 11-10-2018 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 7.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 7.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 7.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 7.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 7.9E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.30.980.10 70 223 3.9E-59 T 11-10-2018 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Gene3D G3DSA:3.10.20.30 1 64 3.4E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 530 1.6E-40 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 33.582 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 Pfam PF03129 Anticodon binding domain 542 631 6.1E-22 T 11-10-2018 IPR004154 Anticodon-binding XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SUPERFAMILY SSF81271 2 62 8.17E-12 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XFUD_03120 2b1ea5db42b9d64c2a4b7ab167f5c562 635 SUPERFAMILY SSF52954 530 632 1.31E-32 T 11-10-2018 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 SUPERFAMILY SSF47226 934 1053 1.7E-24 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Gene3D G3DSA:1.20.120.160 528 658 4.3E-19 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1346 1360 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1426 1439 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1402 1420 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 SUPERFAMILY SSF52172 1593 1715 2.42E-34 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 SUPERFAMILY SSF55874 1258 1439 7.73E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 SMART SM00387 1301 1442 5.2E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 SUPERFAMILY SSF47226 12 133 2.36E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 SMART SM00260 1434 1571 2.7E-21 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Pfam PF00072 Response regulator receiver domain 1596 1707 1.0E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Gene3D G3DSA:1.20.120.160 933 1059 1.1E-23 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Gene3D G3DSA:2.30.30.40 1442 1566 5.7E-29 T 11-10-2018 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Pfam PF01584 CheW-like domain 1446 1573 4.3E-19 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 SUPERFAMILY SSF47226 290 408 4.41E-7 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 SUPERFAMILY SSF50341 1441 1570 6.15E-24 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Gene3D G3DSA:3.30.565.10 1255 1441 1.1E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 SMART SM01231 1118 1256 1.5E-10 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Pfam PF01627 Hpt domain 692 781 1.8E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Pfam PF01627 Hpt domain 934 1034 4.9E-14 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Pfam PF01627 Hpt domain 12 111 6.8E-7 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Pfam PF01627 Hpt domain 534 622 2.4E-14 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1120 1255 6.4E-6 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Gene3D G3DSA:3.40.50.12740 1595 1718 8.1E-36 T 11-10-2018 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 SMART SM00448 1594 1707 9.1E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Gene3D G3DSA:1.20.120.160 689 830 6.2E-7 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 SUPERFAMILY SSF47226 689 804 2.36E-13 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Gene3D G3DSA:2.40.50.180 1465 1526 5.7E-29 T 11-10-2018 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 SUPERFAMILY SSF47226 530 634 6.67E-22 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 SMART SM00073 531 629 3.0E-4 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 SMART SM00073 932 1029 2.7E-13 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFUD_08465 ea438fbaaa3829f54992c219361a024c 1718 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1305 1441 4.0E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 SUPERFAMILY SSF143517 1047 1191 6.41E-40 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 Pfam PF02559 CarD-like/TRCF domain 525 618 1.5E-24 T 11-10-2018 IPR003711 CarD-like/TRCF domain XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 Gene3D G3DSA:3.40.50.300 587 826 1.8E-231 T 11-10-2018 XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 SUPERFAMILY SSF52540 370 510 7.73E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 SUPERFAMILY SSF52540 568 828 7.53E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 Gene3D G3DSA:3.40.50.11180 28 346 2.4E-106 T 11-10-2018 XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 Gene3D G3DSA:3.90.1150.50 1050 1192 4.8E-39 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 SUPERFAMILY SSF52540 827 1035 5.78E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 153 1128 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 Gene3D G3DSA:3.40.50.11140 369 433 1.7E-7 T 11-10-2018 XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 Pfam PF00270 DEAD/DEAH box helicase 650 807 9.6E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 Pfam PF03461 TRCF domain 1055 1146 1.1E-24 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 SMART SM01058 524 621 4.2E-48 T 11-10-2018 IPR003711 CarD-like/TRCF domain XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 Gene3D G3DSA:2.30.30.840 528 586 1.8E-231 T 11-10-2018 XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 SMART SM00490 871 955 5.0E-18 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 Gene3D G3DSA:3.30.2060.10 135 220 2.4E-106 T 11-10-2018 XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 SUPERFAMILY SSF52540 20 352 1.31E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 Gene3D G3DSA:3.40.50.300 524 1035 1.8E-231 T 11-10-2018 XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 SMART SM00982 1054 1154 9.7E-45 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 Pfam PF00271 Helicase conserved C-terminal domain 855 954 5.6E-16 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 SUPERFAMILY SSF141259 516 593 2.48E-21 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 27 1158 27.866 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 XFUD_00185 ab84cc5afc8e00424ed9c37ee6e57072 1193 SMART SM00487 645 835 3.0E-34 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_11075 040c921f5364f4aef7597035bacb9898 463 Gene3D G3DSA:1.20.81.30 315 425 6.4E-27 T 11-10-2018 XFUD_11075 040c921f5364f4aef7597035bacb9898 463 Pfam PF00482 Type II secretion system (T2SS), protein F 332 454 7.6E-29 T 11-10-2018 IPR018076 Type II secretion system F domain XFUD_11075 040c921f5364f4aef7597035bacb9898 463 Pfam PF00482 Type II secretion system (T2SS), protein F 128 251 1.5E-31 T 11-10-2018 IPR018076 Type II secretion system F domain XFUD_11075 040c921f5364f4aef7597035bacb9898 463 PRINTS PR00812 Bacterial general secretion pathway protein F signature 427 441 1.2E-17 T 11-10-2018 IPR003004 GspF/PilC family XFUD_11075 040c921f5364f4aef7597035bacb9898 463 PRINTS PR00812 Bacterial general secretion pathway protein F signature 223 251 1.2E-17 T 11-10-2018 IPR003004 GspF/PilC family XFUD_11075 040c921f5364f4aef7597035bacb9898 463 PRINTS PR00812 Bacterial general secretion pathway protein F signature 443 462 1.2E-17 T 11-10-2018 IPR003004 GspF/PilC family XFUD_11075 040c921f5364f4aef7597035bacb9898 463 PRINTS PR00812 Bacterial general secretion pathway protein F signature 124 136 1.2E-17 T 11-10-2018 IPR003004 GspF/PilC family XFUD_11075 040c921f5364f4aef7597035bacb9898 463 Gene3D G3DSA:1.20.81.30 115 230 1.0E-30 T 11-10-2018 XFUD_11075 040c921f5364f4aef7597035bacb9898 463 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 223 251 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 XFUD_09680 10833ca31506d2050efea4337e4d0186 112 Gene3D G3DSA:1.10.1270.10 8 105 4.3E-29 T 11-10-2018 IPR038116 TrpR-like superfamily XFUD_09680 10833ca31506d2050efea4337e4d0186 112 PIRSF PIRSF012508 4 106 1.8E-33 T 11-10-2018 IPR013368 TrpR homologue YerC/YecD XFUD_09680 10833ca31506d2050efea4337e4d0186 112 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 16 98 2.3E-17 T 11-10-2018 IPR013368 TrpR homologue YerC/YecD XFUD_09680 10833ca31506d2050efea4337e4d0186 112 SUPERFAMILY SSF48295 15 99 6.8E-24 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XFUD_09680 10833ca31506d2050efea4337e4d0186 112 Pfam PF01371 Trp repressor protein 16 100 9.8E-29 T 11-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 XFUD_08535 ab82bb6d3210cee8d49ea2137afce143 534 PIRSF PIRSF015855 3 523 1.1E-150 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XFUD_08535 ab82bb6d3210cee8d49ea2137afce143 534 SUPERFAMILY SSF53335 58 380 6.14E-56 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_08535 ab82bb6d3210cee8d49ea2137afce143 534 Pfam PF01555 DNA methylase 85 378 5.3E-42 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XFUD_08535 ab82bb6d3210cee8d49ea2137afce143 534 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 327 349 3.1E-17 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XFUD_08535 ab82bb6d3210cee8d49ea2137afce143 534 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 85 97 3.1E-17 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XFUD_08535 ab82bb6d3210cee8d49ea2137afce143 534 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 126 145 3.1E-17 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XFUD_08535 ab82bb6d3210cee8d49ea2137afce143 534 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 350 364 3.1E-17 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 XFUD_01220 7a1ef9ace2e259efc902ee3866be2a8d 569 ProSitePatterns PS00455 Putative AMP-binding domain signature. 213 224 - T 11-10-2018 IPR020845 AMP-binding, conserved site XFUD_01220 7a1ef9ace2e259efc902ee3866be2a8d 569 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 548 1.1E-16 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XFUD_01220 7a1ef9ace2e259efc902ee3866be2a8d 569 Pfam PF00501 AMP-binding enzyme 37 465 6.2E-108 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XFUD_01220 7a1ef9ace2e259efc902ee3866be2a8d 569 Gene3D G3DSA:3.30.300.310 461 562 3.6E-29 T 11-10-2018 XFUD_01220 7a1ef9ace2e259efc902ee3866be2a8d 569 SUPERFAMILY SSF56801 23 558 6.54E-147 T 11-10-2018 XFUD_01220 7a1ef9ace2e259efc902ee3866be2a8d 569 Gene3D G3DSA:3.40.50.12780 16 456 2.6E-116 T 11-10-2018 XFUD_10095 a8e8655e611ea6dbaf3b64539ea5ecc8 442 SUPERFAMILY SSF55205 9 432 2.45E-123 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 XFUD_10095 a8e8655e611ea6dbaf3b64539ea5ecc8 442 Gene3D G3DSA:3.65.10.10 19 424 3.6E-146 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XFUD_10095 a8e8655e611ea6dbaf3b64539ea5ecc8 442 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 15 434 31.578 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XFUD_10095 a8e8655e611ea6dbaf3b64539ea5ecc8 442 PIRSF PIRSF000505 8 438 1.9E-116 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XFUD_10095 a8e8655e611ea6dbaf3b64539ea5ecc8 442 ProSitePatterns PS00104 EPSP synthase signature 1. 94 108 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XFUD_10095 a8e8655e611ea6dbaf3b64539ea5ecc8 442 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 13 425 9.9E-113 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 XFUD_10095 a8e8655e611ea6dbaf3b64539ea5ecc8 442 ProSitePatterns PS00885 EPSP synthase signature 2. 346 364 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XFUD_10095 a8e8655e611ea6dbaf3b64539ea5ecc8 442 Gene3D G3DSA:3.65.10.10 27 236 3.6E-146 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XFUD_10095 a8e8655e611ea6dbaf3b64539ea5ecc8 442 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 19 429 3.7E-118 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 XFUD_04935 043aeec3120dec31b9af43c1b6d30868 179 SUPERFAMILY SSF55282 3 179 7.77E-74 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04935 043aeec3120dec31b9af43c1b6d30868 179 Pfam PF00281 Ribosomal protein L5 24 80 4.3E-26 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04935 043aeec3120dec31b9af43c1b6d30868 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04935 043aeec3120dec31b9af43c1b6d30868 179 Gene3D G3DSA:3.30.1440.10 1 179 4.7E-74 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04935 043aeec3120dec31b9af43c1b6d30868 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 41.91 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04935 043aeec3120dec31b9af43c1b6d30868 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.2E-37 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04935 043aeec3120dec31b9af43c1b6d30868 179 PIRSF PIRSF002161 1 179 9.7E-62 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_00870 19257b7e5a11c15afdf132efc285007b 308 ProSitePatterns PS01057 SAICAR synthetase signature 1. 117 131 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFUD_00870 19257b7e5a11c15afdf132efc285007b 308 SUPERFAMILY SSF56104 5 305 2.84E-96 T 11-10-2018 XFUD_00870 19257b7e5a11c15afdf132efc285007b 308 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 304 26.767 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFUD_00870 19257b7e5a11c15afdf132efc285007b 308 Gene3D G3DSA:3.30.470.20 117 260 1.9E-58 T 11-10-2018 XFUD_00870 19257b7e5a11c15afdf132efc285007b 308 Pfam PF01259 SAICAR synthetase 18 279 1.1E-96 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFUD_00870 19257b7e5a11c15afdf132efc285007b 308 ProSitePatterns PS01058 SAICAR synthetase signature 2. 216 224 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFUD_00870 19257b7e5a11c15afdf132efc285007b 308 Gene3D G3DSA:3.30.200.20 3 115 8.0E-28 T 11-10-2018 XFUD_00870 19257b7e5a11c15afdf132efc285007b 308 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 19 303 2.4E-74 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 XFUD_11200 98722d3bd4df6d088b2cdf39f72550f4 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 7.4E-194 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 XFUD_11200 98722d3bd4df6d088b2cdf39f72550f4 466 SUPERFAMILY SSF55681 98 464 9.74E-95 T 11-10-2018 XFUD_11200 98722d3bd4df6d088b2cdf39f72550f4 466 Gene3D G3DSA:3.30.930.10 108 464 2.0E-107 T 11-10-2018 XFUD_11200 98722d3bd4df6d088b2cdf39f72550f4 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 5.7E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_11200 98722d3bd4df6d088b2cdf39f72550f4 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 5.7E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_11200 98722d3bd4df6d088b2cdf39f72550f4 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 5.7E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_11200 98722d3bd4df6d088b2cdf39f72550f4 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 5.7E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_11200 98722d3bd4df6d088b2cdf39f72550f4 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 459 3.7E-82 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_11200 98722d3bd4df6d088b2cdf39f72550f4 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.287 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 XFUD_11200 98722d3bd4df6d088b2cdf39f72550f4 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 4.8E-10 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XFUD_11200 98722d3bd4df6d088b2cdf39f72550f4 466 Gene3D G3DSA:2.40.50.140 2 105 2.1E-18 T 11-10-2018 XFUD_11200 98722d3bd4df6d088b2cdf39f72550f4 466 SUPERFAMILY SSF50249 15 102 2.57E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_00440 f2e86e496132f6b09b847e532df27384 460 SMART SM00812 33 357 1.2E-15 T 11-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XFUD_00440 f2e86e496132f6b09b847e532df27384 460 Gene3D G3DSA:2.60.120.260 341 453 2.6E-24 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFUD_00440 f2e86e496132f6b09b847e532df27384 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 143 162 1.1E-6 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XFUD_00440 f2e86e496132f6b09b847e532df27384 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 95 111 1.1E-6 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XFUD_00440 f2e86e496132f6b09b847e532df27384 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 283 304 1.1E-6 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XFUD_00440 f2e86e496132f6b09b847e532df27384 460 SUPERFAMILY SSF49785 347 452 6.26E-13 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFUD_00440 f2e86e496132f6b09b847e532df27384 460 Gene3D G3DSA:3.20.20.80 22 332 2.0E-113 T 11-10-2018 XFUD_00440 f2e86e496132f6b09b847e532df27384 460 Pfam PF00754 F5/8 type C domain 348 445 9.6E-12 T 11-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain XFUD_00440 f2e86e496132f6b09b847e532df27384 460 SUPERFAMILY SSF51445 30 326 3.68E-84 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFUD_00440 f2e86e496132f6b09b847e532df27384 460 Pfam PF01120 Alpha-L-fucosidase 70 324 2.1E-41 T 11-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 XFUD_06240 7822053d0d683508a40f2523cab9bd5a 284 Gene3D G3DSA:3.10.310.10 124 271 3.3E-88 T 11-10-2018 XFUD_06240 7822053d0d683508a40f2523cab9bd5a 284 Pfam PF01678 Diaminopimelate epimerase 162 273 5.5E-23 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XFUD_06240 7822053d0d683508a40f2523cab9bd5a 284 Pfam PF01678 Diaminopimelate epimerase 12 131 2.3E-21 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XFUD_06240 7822053d0d683508a40f2523cab9bd5a 284 SUPERFAMILY SSF54506 149 282 1.73E-46 T 11-10-2018 XFUD_06240 7822053d0d683508a40f2523cab9bd5a 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 10 284 35.414 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XFUD_06240 7822053d0d683508a40f2523cab9bd5a 284 Gene3D G3DSA:3.10.310.10 12 280 3.3E-88 T 11-10-2018 XFUD_06240 7822053d0d683508a40f2523cab9bd5a 284 SUPERFAMILY SSF54506 10 139 1.57E-39 T 11-10-2018 XFUD_06240 7822053d0d683508a40f2523cab9bd5a 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 73 87 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XFUD_06240 7822053d0d683508a40f2523cab9bd5a 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 11 281 4.5E-74 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 XFUD_07745 cb80b35468e8a436e0c8ed9570f36375 208 Pfam PF05036 Sporulation related domain 66 137 3.9E-6 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 XFUD_07745 cb80b35468e8a436e0c8ed9570f36375 208 Gene3D G3DSA:3.30.70.1070 107 173 6.5E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XFUD_05035 fad06228d1bb1dbe01099c9bf8927476 431 PIRSF PIRSF003095 1 431 6.8E-102 T 11-10-2018 IPR005215 Trigger factor GO:0015031 XFUD_05035 fad06228d1bb1dbe01099c9bf8927476 431 Gene3D G3DSA:3.30.70.1050 1 111 3.2E-29 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 XFUD_05035 fad06228d1bb1dbe01099c9bf8927476 431 Gene3D G3DSA:3.10.50.40 147 243 2.2E-62 T 11-10-2018 XFUD_05035 fad06228d1bb1dbe01099c9bf8927476 431 Gene3D G3DSA:1.10.3120.10 112 417 2.2E-62 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 XFUD_05035 fad06228d1bb1dbe01099c9bf8927476 431 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 260 413 4.2E-34 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 XFUD_05035 fad06228d1bb1dbe01099c9bf8927476 431 Hamap MF_00303 Trigger factor [tig]. 1 420 16.918 T 11-10-2018 IPR005215 Trigger factor GO:0015031 XFUD_05035 fad06228d1bb1dbe01099c9bf8927476 431 Pfam PF05697 Bacterial trigger factor protein (TF) 1 141 3.4E-32 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 XFUD_05035 fad06228d1bb1dbe01099c9bf8927476 431 SUPERFAMILY SSF109998 245 429 4.51E-34 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily XFUD_05035 fad06228d1bb1dbe01099c9bf8927476 431 TIGRFAM TIGR00115 tig: trigger factor 11 412 3.1E-96 T 11-10-2018 IPR005215 Trigger factor GO:0015031 XFUD_05035 fad06228d1bb1dbe01099c9bf8927476 431 SUPERFAMILY SSF102735 1 124 1.83E-28 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 XFUD_05035 fad06228d1bb1dbe01099c9bf8927476 431 SUPERFAMILY SSF54534 129 242 3.93E-14 T 11-10-2018 XFUD_02625 51d510edd99572fb610967a601f63aa9 413 Pfam PF00589 Phage integrase family 245 348 1.3E-9 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFUD_02625 51d510edd99572fb610967a601f63aa9 413 Gene3D G3DSA:3.30.160.390 3 92 1.7E-7 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily XFUD_02625 51d510edd99572fb610967a601f63aa9 413 Gene3D G3DSA:1.10.150.130 93 206 2.9E-10 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFUD_02625 51d510edd99572fb610967a601f63aa9 413 Gene3D G3DSA:1.10.443.10 221 391 2.9E-19 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFUD_02625 51d510edd99572fb610967a601f63aa9 413 SUPERFAMILY SSF56349 97 386 4.0E-40 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFUD_02625 51d510edd99572fb610967a601f63aa9 413 Pfam PF13356 Arm DNA-binding domain 4 91 6.3E-15 T 11-10-2018 IPR025166 Integrase, DNA-binding domain XFUD_08510 01d47b5eee30b0dd3875b005429035d3 545 SUPERFAMILY SSF56317 4 245 1.01E-60 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XFUD_08510 01d47b5eee30b0dd3875b005429035d3 545 Gene3D G3DSA:3.60.110.10 1 254 1.1E-83 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XFUD_08510 01d47b5eee30b0dd3875b005429035d3 545 PIRSF PIRSF006630 2 545 1.1E-179 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XFUD_08510 01d47b5eee30b0dd3875b005429035d3 545 Pfam PF02540 NAD synthase 270 520 1.3E-68 T 11-10-2018 IPR022310 NAD/GMP synthase XFUD_08510 01d47b5eee30b0dd3875b005429035d3 545 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 38 53 - T 11-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 XFUD_08510 01d47b5eee30b0dd3875b005429035d3 545 TIGRFAM TIGR00552 nadE: NAD+ synthetase 277 526 6.9E-58 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 XFUD_08510 01d47b5eee30b0dd3875b005429035d3 545 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 545 28.858 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XFUD_08510 01d47b5eee30b0dd3875b005429035d3 545 Pfam PF00795 Carbon-nitrogen hydrolase 6 244 2.7E-25 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 XFUD_08510 01d47b5eee30b0dd3875b005429035d3 545 SUPERFAMILY SSF52402 268 528 8.6E-74 T 11-10-2018 XFUD_08510 01d47b5eee30b0dd3875b005429035d3 545 Gene3D G3DSA:3.40.50.620 267 545 1.9E-109 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_06945 f3050b4d9d40aad93d8573c1ab20fbdc 399 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 72 239 3.2E-23 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XFUD_06945 f3050b4d9d40aad93d8573c1ab20fbdc 399 Gene3D G3DSA:3.40.47.10 2 244 7.5E-31 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_06945 f3050b4d9d40aad93d8573c1ab20fbdc 399 SMART SM00825 Beta-ketoacyl synthase 4 399 6.5E-9 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XFUD_06945 f3050b4d9d40aad93d8573c1ab20fbdc 399 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site XFUD_06945 f3050b4d9d40aad93d8573c1ab20fbdc 399 Gene3D G3DSA:3.40.47.10 250 393 1.9E-41 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_06945 f3050b4d9d40aad93d8573c1ab20fbdc 399 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 248 355 6.0E-27 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XFUD_06945 f3050b4d9d40aad93d8573c1ab20fbdc 399 SUPERFAMILY SSF53901 211 397 4.12E-49 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_06945 f3050b4d9d40aad93d8573c1ab20fbdc 399 SUPERFAMILY SSF53901 1 241 5.17E-35 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_07275 533885cbf98c66afce734d2265314194 101 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 6 95 1.7E-33 T 11-10-2018 IPR014057 Uncharacterized protein HI1420 XFUD_07275 533885cbf98c66afce734d2265314194 101 SUPERFAMILY SSF47413 36 94 3.66E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_07275 533885cbf98c66afce734d2265314194 101 Pfam PF01381 Helix-turn-helix 50 93 5.4E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_07275 533885cbf98c66afce734d2265314194 101 SMART SM00530 43 96 0.006 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_07275 533885cbf98c66afce734d2265314194 101 Gene3D G3DSA:1.10.260.40 40 100 7.4E-6 T 11-10-2018 XFUD_05920 f5475783700755abae1e4856943547c5 460 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 347 366 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFUD_05920 f5475783700755abae1e4856943547c5 460 Gene3D G3DSA:1.10.10.1330 99 209 1.0E-17 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily XFUD_05920 f5475783700755abae1e4856943547c5 460 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 1.2E-15 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFUD_05920 f5475783700755abae1e4856943547c5 460 Gene3D G3DSA:1.10.10.60 399 457 9.8E-22 T 11-10-2018 XFUD_05920 f5475783700755abae1e4856943547c5 460 Pfam PF04963 Sigma-54 factor, core binding domain 94 287 4.6E-46 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 XFUD_05920 f5475783700755abae1e4856943547c5 460 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 438 445 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFUD_05920 f5475783700755abae1e4856943547c5 460 PIRSF PIRSF000774 1 460 1.4E-131 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFUD_05920 f5475783700755abae1e4856943547c5 460 PRINTS PR00045 Sigma-54 factor signature 375 386 1.9E-25 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFUD_05920 f5475783700755abae1e4856943547c5 460 PRINTS PR00045 Sigma-54 factor signature 433 451 1.9E-25 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFUD_05920 f5475783700755abae1e4856943547c5 460 PRINTS PR00045 Sigma-54 factor signature 359 371 1.9E-25 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFUD_05920 f5475783700755abae1e4856943547c5 460 PRINTS PR00045 Sigma-54 factor signature 168 185 1.9E-25 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFUD_05920 f5475783700755abae1e4856943547c5 460 Pfam PF04552 Sigma-54, DNA binding domain 300 458 5.4E-64 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding XFUD_05920 f5475783700755abae1e4856943547c5 460 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 456 4.0E-137 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 SMART SM01097 3 133 6.1E-88 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 Pfam PF00117 Glutamine amidotransferase class-I 193 368 8.5E-45 T 11-10-2018 IPR017926 Glutamine amidotransferase XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 Gene3D G3DSA:3.40.50.880 151 372 5.4E-73 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 SUPERFAMILY SSF52317 153 372 3.82E-61 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 374 47.348 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 371 3.2E-143 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 131 2.7E-51 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 260 271 3.3E-11 T 11-10-2018 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 232 241 3.3E-11 T 11-10-2018 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 345 358 3.3E-11 T 11-10-2018 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 Gene3D G3DSA:3.50.30.20 2 150 1.1E-57 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 SUPERFAMILY SSF52021 4 148 8.89E-56 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 PRINTS PR00097 Anthranilate synthase component II signature 232 241 1.1E-5 T 11-10-2018 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 PRINTS PR00097 Anthranilate synthase component II signature 260 271 1.1E-5 T 11-10-2018 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 PRINTS PR00097 Anthranilate synthase component II signature 345 358 1.1E-5 T 11-10-2018 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 260 276 2.4E-37 T 11-10-2018 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 190 204 2.4E-37 T 11-10-2018 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 277 294 2.4E-37 T 11-10-2018 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 302 313 2.4E-37 T 11-10-2018 XFUD_04675 00e6d3adb61a9076cecd373e268e706a 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 229 243 2.4E-37 T 11-10-2018 XFUD_05665 86797e46f4f256f3ef79ad1162a70eff 286 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 16 278 7.2E-124 T 11-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 XFUD_05665 86797e46f4f256f3ef79ad1162a70eff 286 SUPERFAMILY SSF161098 23 271 1.4E-56 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_05665 86797e46f4f256f3ef79ad1162a70eff 286 Gene3D G3DSA:1.10.3720.10 22 280 1.1E-68 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_05665 86797e46f4f256f3ef79ad1162a70eff 286 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 13 276 4.7E-96 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 XFUD_05665 86797e46f4f256f3ef79ad1162a70eff 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 276 4.5E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFUD_09400 7d5a5bbec284ec2bf762686829272b6c 178 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XFUD_09400 7d5a5bbec284ec2bf762686829272b6c 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.243 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XFUD_09400 7d5a5bbec284ec2bf762686829272b6c 178 Gene3D G3DSA:3.90.80.10 1 175 1.1E-69 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XFUD_09400 7d5a5bbec284ec2bf762686829272b6c 178 SUPERFAMILY SSF50324 6 175 9.29E-68 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XFUD_09400 7d5a5bbec284ec2bf762686829272b6c 178 Pfam PF00719 Inorganic pyrophosphatase 18 174 9.7E-54 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 XFUD_03405 81b050d3149eb7fff158075ac1aa5b0e 318 PIRSF PIRSF039102 55 318 5.1E-79 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_03405 81b050d3149eb7fff158075ac1aa5b0e 318 PIRSF PIRSF039102 16 57 7.6E-7 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_03405 81b050d3149eb7fff158075ac1aa5b0e 318 Pfam PF07478 D-ala D-ala ligase C-terminus 120 315 2.2E-53 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_03405 81b050d3149eb7fff158075ac1aa5b0e 318 Gene3D G3DSA:3.30.470.20 101 314 1.8E-69 T 11-10-2018 XFUD_03405 81b050d3149eb7fff158075ac1aa5b0e 318 Gene3D G3DSA:3.40.50.20 6 100 3.1E-25 T 11-10-2018 XFUD_03405 81b050d3149eb7fff158075ac1aa5b0e 318 Gene3D G3DSA:3.30.1490.20 127 195 1.8E-69 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XFUD_03405 81b050d3149eb7fff158075ac1aa5b0e 318 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 259 288 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_03405 81b050d3149eb7fff158075ac1aa5b0e 318 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 17 318 34.199 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_03405 81b050d3149eb7fff158075ac1aa5b0e 318 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 79 90 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_03405 81b050d3149eb7fff158075ac1aa5b0e 318 SUPERFAMILY SSF56059 112 316 9.86E-48 T 11-10-2018 XFUD_03405 81b050d3149eb7fff158075ac1aa5b0e 318 Pfam PF01820 D-ala D-ala ligase N-terminus 18 102 5.6E-14 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_03405 81b050d3149eb7fff158075ac1aa5b0e 318 SUPERFAMILY SSF52440 18 112 2.21E-24 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XFUD_03405 81b050d3149eb7fff158075ac1aa5b0e 318 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 18 317 1.5E-105 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_11015 f5a318175c53db53760b661c3e1b30d8 726 SUPERFAMILY SSF53098 30 179 2.55E-10 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFUD_11015 f5a318175c53db53760b661c3e1b30d8 726 Gene3D G3DSA:3.30.420.10 6 193 4.8E-6 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFUD_11015 f5a318175c53db53760b661c3e1b30d8 726 SUPERFAMILY SSF56672 187 724 5.56E-67 T 11-10-2018 XFUD_11015 f5a318175c53db53760b661c3e1b30d8 726 Pfam PF00476 DNA polymerase family A 267 498 6.7E-10 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_11015 f5a318175c53db53760b661c3e1b30d8 726 SMART SM00482 372 690 9.3E-7 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 Gene3D G3DSA:3.30.360.10 151 316 1.6E-147 T 11-10-2018 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 SUPERFAMILY SSF55347 151 314 1.84E-73 T 11-10-2018 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 PIRSF PIRSF000149 1 334 4.5E-125 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 SMART SM00846 3 152 2.4E-93 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 5.7E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 5.7E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 5.7E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 5.7E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 5.7E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 2.3E-62 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 2.5E-36 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 1.5E-128 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 Gene3D G3DSA:3.40.50.720 4 327 1.6E-147 T 11-10-2018 XFUD_01900 64d2dc7b886a406a39170048043c58ed 334 SUPERFAMILY SSF51735 3 168 2.85E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_04895 69441a0939f294f89264cc95e7a327a1 89 ProSitePatterns PS00323 Ribosomal protein S19 signature. 51 75 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04895 69441a0939f294f89264cc95e7a327a1 89 Pfam PF00203 Ribosomal protein S19 3 81 9.2E-34 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04895 69441a0939f294f89264cc95e7a327a1 89 SUPERFAMILY SSF54570 3 82 6.15E-32 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04895 69441a0939f294f89264cc95e7a327a1 89 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 87 24.105 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04895 69441a0939f294f89264cc95e7a327a1 89 PIRSF PIRSF002144 1 89 7.0E-32 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04895 69441a0939f294f89264cc95e7a327a1 89 PRINTS PR00975 Ribosomal protein S19 family signature 63 78 3.5E-20 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04895 69441a0939f294f89264cc95e7a327a1 89 PRINTS PR00975 Ribosomal protein S19 family signature 31 50 3.5E-20 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04895 69441a0939f294f89264cc95e7a327a1 89 PRINTS PR00975 Ribosomal protein S19 family signature 51 63 3.5E-20 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04895 69441a0939f294f89264cc95e7a327a1 89 Gene3D G3DSA:3.30.860.10 1 89 3.2E-36 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04895 69441a0939f294f89264cc95e7a327a1 89 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 87 5.5E-38 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 417 431 6.9E-9 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 490 509 6.9E-9 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 553 568 6.9E-9 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Gene3D G3DSA:3.30.310.50 698 785 6.4E-15 T 11-10-2018 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Gene3D G3DSA:3.40.120.10 492 569 5.7E-18 T 11-10-2018 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 476 573 1.5E-16 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 731 775 3.4E-6 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 SUPERFAMILY SSF53738 473 575 3.1E-21 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 SUPERFAMILY SSF53738 324 459 3.3E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 SUPERFAMILY SSF55957 689 782 1.02E-13 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Gene3D G3DSA:3.40.120.10 570 688 1.2E-35 T 11-10-2018 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 578 689 6.1E-19 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 SUPERFAMILY SSF53738 579 684 1.37E-27 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 329 458 1.9E-32 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_00635 86d5bd9bf4afc8d3d3ce61cd3c0bc99d 787 Gene3D G3DSA:3.40.120.10 319 470 3.3E-40 T 11-10-2018 XFUD_06990 daf347d1865fed0b08d643cb0b9ad886 308 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 6 203 4.8E-72 T 11-10-2018 IPR010183 Bacteriophage lambda, Bet XFUD_06990 daf347d1865fed0b08d643cb0b9ad886 308 Pfam PF03837 RecT family 18 206 1.2E-23 T 11-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 XFUD_07490 5f2de8c3d7f44505351477dc47c6ea21 349 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 178 205 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XFUD_07490 5f2de8c3d7f44505351477dc47c6ea21 349 SMART SM00829 13 342 1.5E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XFUD_07490 5f2de8c3d7f44505351477dc47c6ea21 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XFUD_07490 5f2de8c3d7f44505351477dc47c6ea21 349 Gene3D G3DSA:3.40.50.720 159 314 2.6E-132 T 11-10-2018 XFUD_07490 5f2de8c3d7f44505351477dc47c6ea21 349 Pfam PF00107 Zinc-binding dehydrogenase 185 308 2.2E-23 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XFUD_07490 5f2de8c3d7f44505351477dc47c6ea21 349 SUPERFAMILY SSF50129 5 171 8.65E-48 T 11-10-2018 IPR011032 GroES-like superfamily XFUD_07490 5f2de8c3d7f44505351477dc47c6ea21 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 142 1.1E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XFUD_07490 5f2de8c3d7f44505351477dc47c6ea21 349 Gene3D G3DSA:3.90.180.10 12 342 2.6E-132 T 11-10-2018 XFUD_07490 5f2de8c3d7f44505351477dc47c6ea21 349 SUPERFAMILY SSF51735 151 312 9.01E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 254 271 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 SUPERFAMILY SSF52279 373 608 5.1E-53 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 254 272 6.1E-19 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 82 98 6.1E-19 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 147 163 6.1E-19 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 120 6.1E-19 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 PRINTS PR00133 Glycosyl hydrolase family 3 signature 184 200 6.1E-19 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 Pfam PF14310 Fibronectin type III-like domain 642 709 3.0E-17 T 11-10-2018 IPR026891 Fibronectin type III-like domain XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 SUPERFAMILY SSF51445 3 372 2.32E-98 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 Gene3D G3DSA:2.60.40.10 608 721 8.1E-27 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 SMART SM01217 642 711 8.1E-27 T 11-10-2018 IPR026891 Fibronectin type III-like domain XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 Gene3D G3DSA:3.20.20.300 3 353 5.4E-114 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 Gene3D G3DSA:3.40.50.1700 359 607 1.1E-76 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 15 332 1.7E-68 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFUD_01825 7d07563a8f93f9940bfeccd36e15adb7 725 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 373 605 3.6E-53 T 11-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 XFUD_01160 bc73fe80dc01cc19c6391323e01f0d41 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 192 1.3E-11 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XFUD_01160 bc73fe80dc01cc19c6391323e01f0d41 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 151 1.3E-11 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XFUD_01160 bc73fe80dc01cc19c6391323e01f0d41 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 1.3E-11 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XFUD_01160 bc73fe80dc01cc19c6391323e01f0d41 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 234 246 1.3E-11 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XFUD_01160 bc73fe80dc01cc19c6391323e01f0d41 417 PIRSF PIRSF036483 2 417 1.4E-218 T 11-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 XFUD_01160 bc73fe80dc01cc19c6391323e01f0d41 417 Gene3D G3DSA:3.40.50.450 6 398 5.1E-139 T 11-10-2018 XFUD_01160 bc73fe80dc01cc19c6391323e01f0d41 417 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 398 43.14 T 11-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 XFUD_01160 bc73fe80dc01cc19c6391323e01f0d41 417 SUPERFAMILY SSF53784 6 415 8.76E-101 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XFUD_01160 bc73fe80dc01cc19c6391323e01f0d41 417 Gene3D G3DSA:3.40.50.460 139 385 5.1E-139 T 11-10-2018 XFUD_01160 bc73fe80dc01cc19c6391323e01f0d41 417 Pfam PF00365 Phosphofructokinase 10 321 2.4E-49 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 XFUD_10810 c031d461fd733cf7783ffab8d55b6640 112 Gene3D G3DSA:3.10.450.40 3 103 6.3E-20 T 11-10-2018 XFUD_10810 c031d461fd733cf7783ffab8d55b6640 112 Pfam PF04965 Gene 25-like lysozyme 16 85 2.5E-14 T 11-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD XFUD_10810 c031d461fd733cf7783ffab8d55b6640 112 SUPERFAMILY SSF160719 9 103 7.45E-26 T 11-10-2018 XFUD_03055 c031d461fd733cf7783ffab8d55b6640 112 Gene3D G3DSA:3.10.450.40 3 103 6.3E-20 T 11-10-2018 XFUD_03055 c031d461fd733cf7783ffab8d55b6640 112 Pfam PF04965 Gene 25-like lysozyme 16 85 2.5E-14 T 11-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD XFUD_03055 c031d461fd733cf7783ffab8d55b6640 112 SUPERFAMILY SSF160719 9 103 7.45E-26 T 11-10-2018 XFUD_11375 c92205f9dcce07214c4a47bd4f2be965 330 Gene3D G3DSA:3.30.2350.10 102 330 1.0E-65 T 11-10-2018 XFUD_11375 c92205f9dcce07214c4a47bd4f2be965 330 Gene3D G3DSA:3.10.290.10 19 81 2.1E-18 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XFUD_11375 c92205f9dcce07214c4a47bd4f2be965 330 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 148 162 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_11375 c92205f9dcce07214c4a47bd4f2be965 330 Pfam PF00849 RNA pseudouridylate synthase 111 266 5.6E-26 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_11375 c92205f9dcce07214c4a47bd4f2be965 330 SUPERFAMILY SSF55174 29 80 3.4E-10 T 11-10-2018 XFUD_11375 c92205f9dcce07214c4a47bd4f2be965 330 SMART SM00363 30 89 7.1E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_11375 c92205f9dcce07214c4a47bd4f2be965 330 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 26 329 6.5E-69 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_11375 c92205f9dcce07214c4a47bd4f2be965 330 Pfam PF01479 S4 domain 30 76 2.9E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_11375 c92205f9dcce07214c4a47bd4f2be965 330 SUPERFAMILY SSF55120 100 329 1.34E-55 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_09310 432c0e6e89bb04ea5bb75bd946209491 236 Gene3D G3DSA:1.20.58.220 115 226 2.2E-31 T 11-10-2018 IPR038078 PhoU-like domain superfamily XFUD_09310 432c0e6e89bb04ea5bb75bd946209491 236 Gene3D G3DSA:1.20.58.220 1 114 1.9E-30 T 11-10-2018 IPR038078 PhoU-like domain superfamily XFUD_09310 432c0e6e89bb04ea5bb75bd946209491 236 PIRSF PIRSF003107 7 222 2.3E-55 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 XFUD_09310 432c0e6e89bb04ea5bb75bd946209491 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 11 220 5.5E-59 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 XFUD_09310 432c0e6e89bb04ea5bb75bd946209491 236 SUPERFAMILY SSF109755 11 221 2.3E-62 T 11-10-2018 XFUD_09310 432c0e6e89bb04ea5bb75bd946209491 236 Pfam PF01895 PhoU domain 127 210 1.6E-16 T 11-10-2018 IPR026022 PhoU domain XFUD_09310 432c0e6e89bb04ea5bb75bd946209491 236 Pfam PF01895 PhoU domain 24 110 8.7E-19 T 11-10-2018 IPR026022 PhoU domain XFUD_01480 be1012041d9788a78325edee00375c99 375 Gene3D G3DSA:3.30.1330.60 261 375 1.2E-39 T 11-10-2018 IPR036737 OmpA-like domain superfamily XFUD_01480 be1012041d9788a78325edee00375c99 375 Gene3D G3DSA:2.40.160.20 19 201 3.0E-23 T 11-10-2018 XFUD_01480 be1012041d9788a78325edee00375c99 375 Pfam PF13505 Outer membrane protein beta-barrel domain 8 178 1.1E-16 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel XFUD_01480 be1012041d9788a78325edee00375c99 375 SUPERFAMILY SSF103647 227 266 8.63E-6 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 XFUD_01480 be1012041d9788a78325edee00375c99 375 PRINTS PR01021 OMPA domain signature 272 294 6.3E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFUD_01480 be1012041d9788a78325edee00375c99 375 PRINTS PR01021 OMPA domain signature 302 317 6.3E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFUD_01480 be1012041d9788a78325edee00375c99 375 PRINTS PR01021 OMPA domain signature 317 333 6.3E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFUD_01480 be1012041d9788a78325edee00375c99 375 Pfam PF00691 OmpA family 271 367 4.6E-23 T 11-10-2018 IPR006665 OmpA-like domain XFUD_01480 be1012041d9788a78325edee00375c99 375 SUPERFAMILY SSF103088 266 372 1.06E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily XFUD_01480 be1012041d9788a78325edee00375c99 375 SUPERFAMILY SSF56925 27 171 3.14E-18 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XFUD_01390 b89fea7ce2e5896e6af57afd97348401 246 Gene3D G3DSA:3.40.50.720 1 246 1.7E-73 T 11-10-2018 XFUD_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.8E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.8E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.8E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_01390 b89fea7ce2e5896e6af57afd97348401 246 SUPERFAMILY SSF51735 4 244 3.41E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_01390 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.0E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_01390 b89fea7ce2e5896e6af57afd97348401 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XFUD_01390 b89fea7ce2e5896e6af57afd97348401 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 243 2.0E-54 T 11-10-2018 XFUD_01390 b89fea7ce2e5896e6af57afd97348401 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 3.5E-98 T 11-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 XFUD_05345 31b4154d22f1f3e20c9b7007777b0cae 162 PRINTS PR01402 Mutator MutX protein signature 105 125 4.8E-8 T 11-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 XFUD_05345 31b4154d22f1f3e20c9b7007777b0cae 162 PRINTS PR01402 Mutator MutX protein signature 27 42 4.8E-8 T 11-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 XFUD_05345 31b4154d22f1f3e20c9b7007777b0cae 162 PRINTS PR01402 Mutator MutX protein signature 74 100 4.8E-8 T 11-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 XFUD_05345 31b4154d22f1f3e20c9b7007777b0cae 162 PRINTS PR01402 Mutator MutX protein signature 125 142 4.8E-8 T 11-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 XFUD_05345 31b4154d22f1f3e20c9b7007777b0cae 162 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XFUD_05345 31b4154d22f1f3e20c9b7007777b0cae 162 SUPERFAMILY SSF55811 3 138 1.12E-24 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XFUD_05345 31b4154d22f1f3e20c9b7007777b0cae 162 Pfam PF00293 NUDIX domain 13 134 1.1E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XFUD_05345 31b4154d22f1f3e20c9b7007777b0cae 162 Gene3D G3DSA:3.90.79.10 9 154 1.3E-29 T 11-10-2018 XFUD_08805 eb49add53b774b6be6f2997b4fb7aa5c 83 SUPERFAMILY SSF47598 2 30 6.52E-5 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XFUD_08805 eb49add53b774b6be6f2997b4fb7aa5c 83 Pfam PF09386 Antitoxin ParD 1 78 4.6E-39 T 11-10-2018 IPR022789 Antitoxin ParD XFUD_08805 eb49add53b774b6be6f2997b4fb7aa5c 83 Gene3D G3DSA:1.10.1220.50 1 83 2.6E-37 T 11-10-2018 XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 604 7.1E-281 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 SUPERFAMILY SSF50447 153 300 7.9E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 Gene3D G3DSA:3.40.50.300 2 199 5.6E-67 T 11-10-2018 XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 Gene3D G3DSA:3.30.70.240 394 487 1.9E-123 T 11-10-2018 XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 SUPERFAMILY SSF52540 3 208 3.02E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 156 1.2E-26 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 SUPERFAMILY SSF54980 303 392 3.6E-15 T 11-10-2018 IPR035647 EF-G domain III/V-like XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 PRINTS PR00315 GTP-binding elongation factor signature 88 99 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 PRINTS PR00315 GTP-binding elongation factor signature 52 60 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 PRINTS PR00315 GTP-binding elongation factor signature 124 133 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 PRINTS PR00315 GTP-binding elongation factor signature 72 82 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 PRINTS PR00315 GTP-binding elongation factor signature 8 21 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 Pfam PF00679 Elongation factor G C-terminus 401 479 4.7E-20 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 Gene3D G3DSA:2.40.50.250 488 604 1.9E-123 T 11-10-2018 XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 Gene3D G3DSA:3.30.70.870 307 595 1.9E-123 T 11-10-2018 XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 SUPERFAMILY SSF54980 403 517 7.19E-26 T 11-10-2018 IPR035647 EF-G domain III/V-like XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 Gene3D G3DSA:2.40.30.10 200 300 1.5E-32 T 11-10-2018 XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 Pfam PF00009 Elongation factor Tu GTP binding domain 5 196 5.1E-56 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 SMART SM00838 400 489 0.0047 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like XFUD_05155 ca30dc1c76c9b50565c009b085a5b2e1 609 Pfam PF03144 Elongation factor Tu domain 2 223 290 4.6E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XFUD_05085 18c36eddb0ab08657ed351bad92f97a3 830 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 212 817 1.2E-166 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFUD_05085 18c36eddb0ab08657ed351bad92f97a3 830 SUPERFAMILY SSF48168 72 293 7.46E-51 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFUD_05085 18c36eddb0ab08657ed351bad92f97a3 830 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 208 289 3.3E-14 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFUD_05085 18c36eddb0ab08657ed351bad92f97a3 830 Gene3D G3DSA:3.20.70.20 139 823 5.4E-195 T 11-10-2018 XFUD_05085 18c36eddb0ab08657ed351bad92f97a3 830 SUPERFAMILY SSF51998 294 819 9.16E-165 T 11-10-2018 XFUD_05085 18c36eddb0ab08657ed351bad92f97a3 830 Pfam PF02867 Ribonucleotide reductase, barrel domain 295 814 1.8E-143 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFUD_05085 18c36eddb0ab08657ed351bad92f97a3 830 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 687 709 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFUD_05085 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 698 725 1.1E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFUD_05085 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 571 594 1.1E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFUD_05085 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 370 389 1.1E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFUD_05085 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 637 660 1.1E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFUD_05085 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 609 631 1.1E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFUD_05085 18c36eddb0ab08657ed351bad92f97a3 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 513 524 1.1E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFUD_11670 81a0b2e2ad61548569b24747a9be1084 453 Pfam PF01554 MatE 23 181 8.6E-21 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XFUD_11670 81a0b2e2ad61548569b24747a9be1084 453 Pfam PF01554 MatE 249 408 2.6E-28 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XFUD_11670 81a0b2e2ad61548569b24747a9be1084 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 423 1.9E-77 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SUPERFAMILY SSF47807 166 280 2.09E-31 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Pfam PF00476 DNA polymerase family A 543 921 1.1E-142 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 TIGRFAM TIGR00593 pola: DNA polymerase I 4 923 2.8E-261 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SMART SM00482 679 887 1.1E-99 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:1.20.1060.10 536 651 3.9E-38 T 11-10-2018 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:1.10.150.20 702 845 1.2E-104 T 11-10-2018 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SMART SM00279 168 203 6.6E-13 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:3.30.70.370 657 919 1.2E-104 T 11-10-2018 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SUPERFAMILY SSF56672 518 923 5.89E-149 T 11-10-2018 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:3.30.420.10 321 534 1.1E-59 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:1.10.150.20 169 241 3.3E-85 T 11-10-2018 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Gene3D G3DSA:3.40.50.1010 4 272 3.3E-85 T 11-10-2018 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SMART SM00474 323 510 1.1E-28 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 165 8.7E-44 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 648 670 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 838 854 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 716 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 747 772 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 723 736 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 671 686 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 784 795 1.8E-69 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Pfam PF01612 3'-5' exonuclease 323 509 6.7E-31 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SUPERFAMILY SSF88723 1 165 1.79E-48 T 11-10-2018 IPR029060 PIN-like domain superfamily XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 ProSitePatterns PS00447 DNA polymerase family A signature. 747 766 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 260 1.1E-26 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SUPERFAMILY SSF53098 320 509 8.22E-47 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFUD_04660 e43f9f1d09ea4247b04d8e4da4a27ef5 923 SMART SM00475 2 256 9.1E-103 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 XFUD_09800 c504121791261e1d30739397c72c582b 243 Pfam PF02565 Recombination protein O C terminal 84 231 3.8E-20 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 XFUD_09800 c504121791261e1d30739397c72c582b 243 Pfam PF11967 Recombination protein O N terminal 5 78 5.3E-17 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal XFUD_09800 c504121791261e1d30739397c72c582b 243 SUPERFAMILY SSF50249 5 78 3.6E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_09800 c504121791261e1d30739397c72c582b 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 153 5.4E-21 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 XFUD_09800 c504121791261e1d30739397c72c582b 243 Hamap MF_00201 DNA repair protein RecO [recO]. 2 236 18.362 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 XFUD_09800 c504121791261e1d30739397c72c582b 243 Gene3D G3DSA:1.20.1440.120 82 242 3.5E-38 T 11-10-2018 XFUD_09800 c504121791261e1d30739397c72c582b 243 Gene3D G3DSA:2.40.50.140 4 80 3.8E-24 T 11-10-2018 XFUD_00885 ba0ab03e499653dfd1d7d9063327dc48 491 Gene3D G3DSA:3.60.120.10 2 490 2.2E-173 T 11-10-2018 IPR005801 ADC synthase GO:0009058 XFUD_00885 ba0ab03e499653dfd1d7d9063327dc48 491 Pfam PF00425 chorismate binding enzyme 223 476 5.9E-96 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal XFUD_00885 ba0ab03e499653dfd1d7d9063327dc48 491 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 27 484 1.1E-163 T 11-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_00885 ba0ab03e499653dfd1d7d9063327dc48 491 PRINTS PR00095 Anthranilate synthase component I signature 324 337 2.8E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_00885 ba0ab03e499653dfd1d7d9063327dc48 491 PRINTS PR00095 Anthranilate synthase component I signature 418 432 2.8E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_00885 ba0ab03e499653dfd1d7d9063327dc48 491 PRINTS PR00095 Anthranilate synthase component I signature 433 447 2.8E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_00885 ba0ab03e499653dfd1d7d9063327dc48 491 PRINTS PR00095 Anthranilate synthase component I signature 338 351 2.8E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_00885 ba0ab03e499653dfd1d7d9063327dc48 491 SUPERFAMILY SSF56322 16 484 2.35E-154 T 11-10-2018 IPR005801 ADC synthase GO:0009058 XFUD_00885 ba0ab03e499653dfd1d7d9063327dc48 491 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 170 1.2E-26 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_12025 15613ed7745d943ad77ce28ad6a322f9 99 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 96 1.3E-38 T 11-10-2018 IPR014056 Addiction module killer protein, predicted XFUD_12025 15613ed7745d943ad77ce28ad6a322f9 99 PIRSF PIRSF028744 1 99 6.8E-38 T 11-10-2018 IPR014056 Addiction module killer protein, predicted XFUD_12025 15613ed7745d943ad77ce28ad6a322f9 99 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 95 2.5E-6 T 11-10-2018 IPR009241 Toxin HigB-like XFUD_01515 e642e50ff7c55704ca7672f15ebc23f3 422 Gene3D G3DSA:3.40.50.1820 338 422 3.4E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_01515 e642e50ff7c55704ca7672f15ebc23f3 422 Gene3D G3DSA:3.40.50.1820 31 251 2.0E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_01515 e642e50ff7c55704ca7672f15ebc23f3 422 PIRSF PIRSF029171 5 421 7.6E-82 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XFUD_01515 e642e50ff7c55704ca7672f15ebc23f3 422 SUPERFAMILY SSF53474 84 369 4.42E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_01515 e642e50ff7c55704ca7672f15ebc23f3 422 Pfam PF03583 Secretory lipase 127 208 3.1E-6 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XFUD_09820 20f7b5e29dd8b780a3f9ea8c408b4f17 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 644 51.545 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 XFUD_09820 20f7b5e29dd8b780a3f9ea8c408b4f17 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 530 608 6.1E-25 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain XFUD_09820 20f7b5e29dd8b780a3f9ea8c408b4f17 647 Gene3D G3DSA:3.30.300.30 517 646 2.1E-31 T 11-10-2018 XFUD_09820 20f7b5e29dd8b780a3f9ea8c408b4f17 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 22 79 2.4E-20 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 XFUD_09820 20f7b5e29dd8b780a3f9ea8c408b4f17 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 11-10-2018 IPR020845 AMP-binding, conserved site XFUD_09820 20f7b5e29dd8b780a3f9ea8c408b4f17 647 Gene3D G3DSA:3.40.50.12780 48 514 7.6E-100 T 11-10-2018 XFUD_09820 20f7b5e29dd8b780a3f9ea8c408b4f17 647 SUPERFAMILY SSF56801 9 641 2.35E-181 T 11-10-2018 XFUD_09820 20f7b5e29dd8b780a3f9ea8c408b4f17 647 Pfam PF00501 AMP-binding enzyme 85 521 2.2E-91 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XFUD_09820 20f7b5e29dd8b780a3f9ea8c408b4f17 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 641 5.2E-298 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 XFUD_08155 7d9f1bf9505fa775e7cfb81d87180301 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 198 1.1E-55 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XFUD_08155 7d9f1bf9505fa775e7cfb81d87180301 214 SUPERFAMILY SSF53254 1 203 2.36E-54 T 11-10-2018 IPR029033 Histidine phosphatase superfamily XFUD_08155 7d9f1bf9505fa775e7cfb81d87180301 214 SMART SM00855 2 158 6.2E-21 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XFUD_08155 7d9f1bf9505fa775e7cfb81d87180301 214 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 XFUD_08155 7d9f1bf9505fa775e7cfb81d87180301 214 Gene3D G3DSA:3.40.50.1240 1 212 1.1E-54 T 11-10-2018 IPR029033 Histidine phosphatase superfamily XFUD_08155 7d9f1bf9505fa775e7cfb81d87180301 214 PIRSF PIRSF000709 1 187 7.9E-12 T 11-10-2018 XFUD_09375 a19f9b36d636f3d068cfaf5058075079 216 SUPERFAMILY SSF53335 63 176 2.96E-15 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_09375 a19f9b36d636f3d068cfaf5058075079 216 Gene3D G3DSA:3.40.50.150 32 165 1.7E-8 T 11-10-2018 XFUD_09375 a19f9b36d636f3d068cfaf5058075079 216 PIRSF PIRSF028445 1 216 2.8E-127 T 11-10-2018 IPR016885 Uncharacterised conserved protein UCP028445 XFUD_11320 523d6a7cfeb7eeaafca13a5225ff8d45 542 Gene3D G3DSA:1.25.40.10 318 510 1.2E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_11320 523d6a7cfeb7eeaafca13a5225ff8d45 542 Pfam PF01435 Peptidase family M48 66 262 1.1E-42 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 XFUD_11320 523d6a7cfeb7eeaafca13a5225ff8d45 542 SUPERFAMILY SSF48452 330 435 2.32E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_11320 523d6a7cfeb7eeaafca13a5225ff8d45 542 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 1 533 33.533 T 11-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 XFUD_11320 523d6a7cfeb7eeaafca13a5225ff8d45 542 Gene3D G3DSA:3.30.2010.10 65 146 2.1E-8 T 11-10-2018 XFUD_11330 99c542f6c70ff8a2f9a04947caacb3cb 335 SUPERFAMILY SSF53659 1 335 5.95E-124 T 11-10-2018 XFUD_11330 99c542f6c70ff8a2f9a04947caacb3cb 335 SMART SM01329 4 331 1.3E-180 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XFUD_11330 99c542f6c70ff8a2f9a04947caacb3cb 335 Gene3D G3DSA:3.40.718.10 1 335 2.5E-141 T 11-10-2018 XFUD_11330 99c542f6c70ff8a2f9a04947caacb3cb 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 331 8.5E-107 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XFUD_11330 99c542f6c70ff8a2f9a04947caacb3cb 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 XFUD_10040 775b0438b50c14a930e69cfddd12e634 211 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 191 3.2E-51 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 XFUD_10040 775b0438b50c14a930e69cfddd12e634 211 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 3.5E-16 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XFUD_10040 775b0438b50c14a930e69cfddd12e634 211 PIRSF PIRSF000847 1 196 3.4E-44 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 XFUD_10040 775b0438b50c14a930e69cfddd12e634 211 Gene3D G3DSA:1.20.120.1760 2 179 1.8E-13 T 11-10-2018 XFUD_10040 775b0438b50c14a930e69cfddd12e634 211 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XFUD_11180 410ddb3339cf8f160ba17ae4239a8547 149 Gene3D G3DSA:3.10.430.100 61 147 3.5E-23 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily XFUD_11180 410ddb3339cf8f160ba17ae4239a8547 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 6.7E-42 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11180 410ddb3339cf8f160ba17ae4239a8547 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.143 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11180 410ddb3339cf8f160ba17ae4239a8547 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 7.2E-21 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal XFUD_11180 410ddb3339cf8f160ba17ae4239a8547 149 SUPERFAMILY SSF55653 61 146 1.44E-21 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily XFUD_11180 410ddb3339cf8f160ba17ae4239a8547 149 Gene3D G3DSA:3.40.5.10 1 50 5.2E-22 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11180 410ddb3339cf8f160ba17ae4239a8547 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11180 410ddb3339cf8f160ba17ae4239a8547 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 9.0E-21 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11180 410ddb3339cf8f160ba17ae4239a8547 149 SUPERFAMILY SSF55658 1 57 1.45E-17 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal XFUD_07520 9f8241e699013cb7e365d13005868037 324 Gene3D G3DSA:3.40.190.10 166 268 6.7E-50 T 11-10-2018 XFUD_07520 9f8241e699013cb7e365d13005868037 324 Pfam PF03466 LysR substrate binding domain 90 294 4.0E-33 T 11-10-2018 IPR005119 LysR, substrate-binding XFUD_07520 9f8241e699013cb7e365d13005868037 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 8.4E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_07520 9f8241e699013cb7e365d13005868037 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_07520 9f8241e699013cb7e365d13005868037 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_07520 9f8241e699013cb7e365d13005868037 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_07520 9f8241e699013cb7e365d13005868037 324 SUPERFAMILY SSF53850 90 295 2.17E-39 T 11-10-2018 XFUD_07520 9f8241e699013cb7e365d13005868037 324 Gene3D G3DSA:1.10.10.10 4 93 4.5E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_07520 9f8241e699013cb7e365d13005868037 324 SUPERFAMILY SSF46785 5 90 1.32E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_07520 9f8241e699013cb7e365d13005868037 324 Gene3D G3DSA:3.40.190.10 94 293 6.7E-50 T 11-10-2018 XFUD_07825 1404b195e2d708f05e50884739515724 198 SUPERFAMILY SSF111304 3 197 5.1E-70 T 11-10-2018 IPR023627 Recombination protein RecR XFUD_07825 1404b195e2d708f05e50884739515724 198 Gene3D G3DSA:1.10.8.420 2 51 1.6E-16 T 11-10-2018 XFUD_07825 1404b195e2d708f05e50884739515724 198 Gene3D G3DSA:3.40.1360.10 76 197 2.6E-39 T 11-10-2018 XFUD_07825 1404b195e2d708f05e50884739515724 198 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 XFUD_07825 1404b195e2d708f05e50884739515724 198 TIGRFAM TIGR00615 recR: recombination protein RecR 3 194 4.8E-69 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 XFUD_07825 1404b195e2d708f05e50884739515724 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 94.352 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 XFUD_07825 1404b195e2d708f05e50884739515724 198 SMART SM00493 79 164 8.0E-9 T 11-10-2018 IPR006171 TOPRIM domain XFUD_07825 1404b195e2d708f05e50884739515724 198 Pfam PF02132 RecR protein 39 77 3.5E-12 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger XFUD_07825 1404b195e2d708f05e50884739515724 198 Pfam PF13662 Toprim domain 80 170 4.1E-21 T 11-10-2018 IPR006171 TOPRIM domain XFUD_02140 aee3a5f4f6a837143331258cadf82520 520 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 58 488 6.3E-95 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XFUD_02140 aee3a5f4f6a837143331258cadf82520 520 Pfam PF05136 Phage portal protein, lambda family 51 384 5.4E-84 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XFUD_07400 9f2f0b8c8dc7782363f599c816199412 353 Gene3D G3DSA:3.90.180.10 18 340 1.7E-87 T 11-10-2018 XFUD_07400 9f2f0b8c8dc7782363f599c816199412 353 SUPERFAMILY SSF50129 1 182 5.33E-41 T 11-10-2018 IPR011032 GroES-like superfamily XFUD_07400 9f2f0b8c8dc7782363f599c816199412 353 SMART SM00829 10 347 2.9E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XFUD_07400 9f2f0b8c8dc7782363f599c816199412 353 SUPERFAMILY SSF51735 140 314 6.57E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_07400 9f2f0b8c8dc7782363f599c816199412 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 126 9.4E-17 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XFUD_07400 9f2f0b8c8dc7782363f599c816199412 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XFUD_07400 9f2f0b8c8dc7782363f599c816199412 353 Gene3D G3DSA:3.40.50.720 162 294 1.7E-87 T 11-10-2018 XFUD_07400 9f2f0b8c8dc7782363f599c816199412 353 Pfam PF00107 Zinc-binding dehydrogenase 177 303 3.8E-16 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XFUD_03000 fc8fddaa2f2b772881fb7ffc44606f4f 650 Gene3D G3DSA:3.40.50.300 20 237 6.1E-12 T 11-10-2018 XFUD_03000 fc8fddaa2f2b772881fb7ffc44606f4f 650 Pfam PF05876 Phage terminase large subunit (GpA) 44 596 1.0E-168 T 11-10-2018 IPR008866 Bacteriophage lambda, GpA XFUD_10865 fc8fddaa2f2b772881fb7ffc44606f4f 650 Gene3D G3DSA:3.40.50.300 20 237 6.1E-12 T 11-10-2018 XFUD_10865 fc8fddaa2f2b772881fb7ffc44606f4f 650 Pfam PF05876 Phage terminase large subunit (GpA) 44 596 1.0E-168 T 11-10-2018 IPR008866 Bacteriophage lambda, GpA XFUD_06745 447cc130eebaecadadf7d8fa6f0b356a 142 Gene3D G3DSA:3.40.50.1010 1 138 5.5E-37 T 11-10-2018 XFUD_06745 447cc130eebaecadadf7d8fa6f0b356a 142 SUPERFAMILY SSF88723 1 136 4.21E-30 T 11-10-2018 IPR029060 PIN-like domain superfamily XFUD_06745 447cc130eebaecadadf7d8fa6f0b356a 142 Pfam PF01850 PIN domain 2 124 3.1E-17 T 11-10-2018 IPR002716 PIN domain XFUD_06745 447cc130eebaecadadf7d8fa6f0b356a 142 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 135 11.848 T 11-10-2018 IPR022907 VapC family GO:0004540 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 4.6E-72 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 Gene3D G3DSA:3.40.190.10 4 208 2.1E-77 T 11-10-2018 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 Gene3D G3DSA:3.40.190.10 101 200 2.1E-77 T 11-10-2018 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 SUPERFAMILY SSF54782 218 303 8.76E-20 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 36.2 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 PIRSF PIRSF001438 1 305 5.1E-107 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 Gene3D G3DSA:3.30.160.40 220 303 1.3E-19 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 SUPERFAMILY SSF53850 3 215 8.9E-78 T 11-10-2018 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 4.6E-11 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 2.0E-40 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 2.0E-40 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 2.0E-40 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 2.0E-40 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 2.0E-40 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_06900 fe8bb88144d350a6dc1de9860d021712 305 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 7.1E-99 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_10940 d7646acf0ded351a0cc24a64b13a9346 256 Gene3D G3DSA:2.10.109.10 119 252 4.4E-10 T 11-10-2018 XFUD_10940 d7646acf0ded351a0cc24a64b13a9346 256 SMART SM00530 6 62 1.1E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_10940 d7646acf0ded351a0cc24a64b13a9346 256 Pfam PF00717 Peptidase S24-like 159 217 1.2E-9 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XFUD_10940 d7646acf0ded351a0cc24a64b13a9346 256 SUPERFAMILY SSF47413 2 65 4.22E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_10940 d7646acf0ded351a0cc24a64b13a9346 256 Pfam PF01381 Helix-turn-helix 8 62 1.8E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_10940 d7646acf0ded351a0cc24a64b13a9346 256 SUPERFAMILY SSF51306 116 251 7.06E-20 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XFUD_10940 d7646acf0ded351a0cc24a64b13a9346 256 Gene3D G3DSA:1.10.260.40 2 70 2.1E-14 T 11-10-2018 XFUD_11305 14bf638312140e49f924c63bad3e9869 698 SUPERFAMILY SSF140356 21 123 2.35E-34 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 XFUD_11305 14bf638312140e49f924c63bad3e9869 698 Gene3D G3DSA:3.30.870.10 521 698 4.2E-63 T 11-10-2018 XFUD_11305 14bf638312140e49f924c63bad3e9869 698 Hamap MF_00347 Polyphosphate kinase [ppk]. 22 691 27.513 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 XFUD_11305 14bf638312140e49f924c63bad3e9869 698 Pfam PF02503 Polyphosphate kinase middle domain 139 340 1.3E-57 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 XFUD_11305 14bf638312140e49f924c63bad3e9869 698 Pfam PF13089 Polyphosphate kinase N-terminal domain 25 128 2.1E-30 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 XFUD_11305 14bf638312140e49f924c63bad3e9869 698 Gene3D G3DSA:3.30.1840.10 20 332 1.4E-91 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 XFUD_11305 14bf638312140e49f924c63bad3e9869 698 Gene3D G3DSA:3.30.870.10 334 517 7.4E-73 T 11-10-2018 XFUD_11305 14bf638312140e49f924c63bad3e9869 698 SUPERFAMILY SSF56024 518 696 9.87E-67 T 11-10-2018 XFUD_11305 14bf638312140e49f924c63bad3e9869 698 PIRSF PIRSF015589 6 698 6.6E-261 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 XFUD_11305 14bf638312140e49f924c63bad3e9869 698 SUPERFAMILY SSF56024 333 512 5.34E-58 T 11-10-2018 XFUD_11305 14bf638312140e49f924c63bad3e9869 698 Pfam PF13090 Polyphosphate kinase C-terminal domain 347 694 4.8E-149 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 XFUD_11305 14bf638312140e49f924c63bad3e9869 698 SUPERFAMILY SSF143724 129 333 6.67E-58 T 11-10-2018 XFUD_11305 14bf638312140e49f924c63bad3e9869 698 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 25 696 4.5E-275 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 XFUD_06080 2f59ce3ed405aff5f2d3182dabea94d9 72 SMART SM00316 4 72 1.7E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFUD_06080 2f59ce3ed405aff5f2d3182dabea94d9 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.9E-26 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 XFUD_06080 2f59ce3ed405aff5f2d3182dabea94d9 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 9.9E-37 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 XFUD_06080 2f59ce3ed405aff5f2d3182dabea94d9 72 SUPERFAMILY SSF50249 1 70 1.01E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_06080 2f59ce3ed405aff5f2d3182dabea94d9 72 Gene3D G3DSA:2.40.50.140 1 72 2.1E-36 T 11-10-2018 XFUD_06080 2f59ce3ed405aff5f2d3182dabea94d9 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.187 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 XFUD_01680 6cab8c98c1a6b20b75be703b7903de7c 566 SMART SM00052 314 557 2.6E-11 T 11-10-2018 IPR001633 EAL domain XFUD_01680 6cab8c98c1a6b20b75be703b7903de7c 566 SUPERFAMILY SSF52172 19 161 6.12E-35 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_01680 6cab8c98c1a6b20b75be703b7903de7c 566 SMART SM00448 20 133 3.5E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_01680 6cab8c98c1a6b20b75be703b7903de7c 566 Pfam PF00072 Response regulator receiver domain 22 133 2.0E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_01680 6cab8c98c1a6b20b75be703b7903de7c 566 Pfam PF00990 Diguanylate cyclase, GGDEF domain 161 306 4.5E-7 T 11-10-2018 IPR000160 GGDEF domain XFUD_01680 6cab8c98c1a6b20b75be703b7903de7c 566 Gene3D G3DSA:3.20.20.450 319 560 2.2E-40 T 11-10-2018 IPR035919 EAL domain superfamily XFUD_01680 6cab8c98c1a6b20b75be703b7903de7c 566 Gene3D G3DSA:3.30.70.270 163 313 7.0E-13 T 11-10-2018 XFUD_01680 6cab8c98c1a6b20b75be703b7903de7c 566 Pfam PF00563 EAL domain 325 551 4.4E-35 T 11-10-2018 IPR001633 EAL domain XFUD_01680 6cab8c98c1a6b20b75be703b7903de7c 566 Gene3D G3DSA:3.40.50.2300 14 162 6.0E-34 T 11-10-2018 XFUD_01680 6cab8c98c1a6b20b75be703b7903de7c 566 SUPERFAMILY SSF55073 162 312 3.84E-13 T 11-10-2018 IPR029787 Nucleotide cyclase XFUD_01680 6cab8c98c1a6b20b75be703b7903de7c 566 SUPERFAMILY SSF141868 325 551 3.14E-37 T 11-10-2018 IPR035919 EAL domain superfamily XFUD_12335 41afb86b5e34b4aed5550e003f2e0457 111 SUPERFAMILY SSF47413 26 103 4.3E-20 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_12335 41afb86b5e34b4aed5550e003f2e0457 111 SMART SM00530 39 95 2.9E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_12335 41afb86b5e34b4aed5550e003f2e0457 111 Gene3D G3DSA:1.10.260.40 14 100 3.0E-22 T 11-10-2018 XFUD_12335 41afb86b5e34b4aed5550e003f2e0457 111 Pfam PF13744 Helix-turn-helix domain 18 97 9.9E-30 T 11-10-2018 IPR039554 HigA2-like, helix-turn-helix domain XFUD_02700 6e536db9fed16b4f901752b04b180c53 228 PIRSF PIRSF001435 15 227 2.1E-50 T 11-10-2018 XFUD_02700 6e536db9fed16b4f901752b04b180c53 228 ProSitePatterns PS01155 Endonuclease III family signature. 118 147 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 XFUD_02700 6e536db9fed16b4f901752b04b180c53 228 SUPERFAMILY SSF48150 21 224 1.73E-71 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 XFUD_02700 6e536db9fed16b4f901752b04b180c53 228 Gene3D G3DSA:1.10.340.30 37 148 9.1E-75 T 11-10-2018 XFUD_02700 6e536db9fed16b4f901752b04b180c53 228 Gene3D G3DSA:1.10.1670.10 28 219 9.1E-75 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 XFUD_02700 6e536db9fed16b4f901752b04b180c53 228 Pfam PF00633 Helix-hairpin-helix motif 116 143 6.1E-8 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 XFUD_02700 6e536db9fed16b4f901752b04b180c53 228 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 203 219 4.2E-6 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 XFUD_02700 6e536db9fed16b4f901752b04b180c53 228 SMART SM00525 202 222 1.8E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 XFUD_02700 6e536db9fed16b4f901752b04b180c53 228 TIGRFAM TIGR01083 nth: endonuclease III 21 210 1.8E-82 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 XFUD_02700 6e536db9fed16b4f901752b04b180c53 228 SMART SM00478 54 201 3.6E-51 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XFUD_02700 6e536db9fed16b4f901752b04b180c53 228 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 50 182 3.9E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XFUD_02700 6e536db9fed16b4f901752b04b180c53 228 Hamap MF_00942 Endonuclease III [nth]. 10 225 36.234 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 XFUD_08505 b64cde8c88e6395e5d1ba6343fc9599c 307 Gene3D G3DSA:3.30.930.10 4 222 2.2E-108 T 11-10-2018 XFUD_08505 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 120 144 3.6E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08505 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 68 83 3.6E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08505 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 259 275 3.6E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08505 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 89 109 3.6E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08505 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 146 166 3.6E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08505 b64cde8c88e6395e5d1ba6343fc9599c 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 169 184 3.6E-66 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08505 b64cde8c88e6395e5d1ba6343fc9599c 307 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 16 298 9.1E-147 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08505 b64cde8c88e6395e5d1ba6343fc9599c 307 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 15 305 4.4E-157 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08505 b64cde8c88e6395e5d1ba6343fc9599c 307 SUPERFAMILY SSF55681 15 298 1.74E-129 T 11-10-2018 XFUD_08505 b64cde8c88e6395e5d1ba6343fc9599c 307 Gene3D G3DSA:1.20.58.180 223 304 8.7E-32 T 11-10-2018 XFUD_08505 b64cde8c88e6395e5d1ba6343fc9599c 307 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 14 299 59.027 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_01420 d842fbd1d9787520be796a7f41f08bb0 120 Gene3D G3DSA:1.10.1660.10 9 46 2.4E-5 T 11-10-2018 XFUD_01420 d842fbd1d9787520be796a7f41f08bb0 120 SUPERFAMILY SSF46955 10 45 3.62E-5 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFUD_10015 b3dcfc7f48ed5c2a3dfe0eaa1f412784 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 121 6.0E-7 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain XFUD_10015 b3dcfc7f48ed5c2a3dfe0eaa1f412784 127 Gene3D G3DSA:3.10.180.10 6 127 1.7E-33 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XFUD_10015 b3dcfc7f48ed5c2a3dfe0eaa1f412784 127 SUPERFAMILY SSF54593 1 121 5.5E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XFUD_00030 5fcd89bda2a05dc2888f683f39467b85 267 Pfam PF02517 CAAX protease self-immunity 157 255 1.1E-16 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 XFUD_05895 81e2fd489677578c60d493053f34f1e8 89 SUPERFAMILY SSF55594 1 88 3.01E-28 T 11-10-2018 IPR035895 HPr-like superfamily XFUD_05895 81e2fd489677578c60d493053f34f1e8 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site XFUD_05895 81e2fd489677578c60d493053f34f1e8 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.7E-33 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like XFUD_05895 81e2fd489677578c60d493053f34f1e8 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 7.7E-28 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like XFUD_05895 81e2fd489677578c60d493053f34f1e8 89 Gene3D G3DSA:3.30.1340.10 1 88 8.6E-31 T 11-10-2018 IPR035895 HPr-like superfamily XFUD_05895 81e2fd489677578c60d493053f34f1e8 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.4E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like XFUD_05895 81e2fd489677578c60d493053f34f1e8 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.4E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like XFUD_05895 81e2fd489677578c60d493053f34f1e8 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.4E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like XFUD_05895 81e2fd489677578c60d493053f34f1e8 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site XFUD_07470 069745ca1fe6d9559ad18a62b1bb5c5d 346 SUPERFAMILY SSF63829 46 342 1.98E-58 T 11-10-2018 XFUD_07470 069745ca1fe6d9559ad18a62b1bb5c5d 346 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 73 295 6.2E-33 T 11-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region XFUD_07470 069745ca1fe6d9559ad18a62b1bb5c5d 346 Gene3D G3DSA:2.120.10.30 25 346 6.4E-107 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XFUD_03165 c12d07967651c43a08d7a1bf8c008773 351 Pfam PF01728 FtsJ-like methyltransferase 184 242 8.0E-6 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 XFUD_03165 c12d07967651c43a08d7a1bf8c008773 351 Gene3D G3DSA:3.40.50.150 174 349 2.8E-52 T 11-10-2018 XFUD_03165 c12d07967651c43a08d7a1bf8c008773 351 Gene3D G3DSA:3.30.2300.20 79 173 6.7E-23 T 11-10-2018 XFUD_03165 c12d07967651c43a08d7a1bf8c008773 351 PIRSF PIRSF028774 1 351 4.8E-160 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 XFUD_03165 c12d07967651c43a08d7a1bf8c008773 351 Gene3D G3DSA:3.30.70.2810 1 78 1.7E-18 T 11-10-2018 XFUD_03165 c12d07967651c43a08d7a1bf8c008773 351 SUPERFAMILY SSF53335 183 293 1.44E-13 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_03165 c12d07967651c43a08d7a1bf8c008773 351 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 349 67.866 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 11 468 5.9E-205 T 11-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 Pfam PF00072 Response regulator receiver domain 11 118 1.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 453 473 5.3E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 453 5.3E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 SMART SM00448 9 124 7.5E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 SMART SM00382 167 310 1.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 Pfam PF02954 Bacterial regulatory protein, Fis family 434 467 1.8E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 Gene3D G3DSA:3.40.50.2300 6 132 4.4E-32 T 11-10-2018 XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 SUPERFAMILY SSF52172 8 191 6.97E-38 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 Pfam PF00158 Sigma-54 interaction domain 147 313 4.1E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 Gene3D G3DSA:3.40.50.300 140 317 1.2E-62 T 11-10-2018 XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 Gene3D G3DSA:1.10.8.60 318 391 1.7E-21 T 11-10-2018 XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 SUPERFAMILY SSF52540 147 391 2.88E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 Gene3D G3DSA:1.10.10.60 392 470 9.5E-16 T 11-10-2018 XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 SUPERFAMILY SSF46689 402 467 7.17E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFUD_08000 cd3696e20bcd8d6b82233e42e2c0dacc 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 XFUD_08245 c5d4a74dbcee7ede203b306bb82b4b42 194 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 193 8.3E-49 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 XFUD_08245 c5d4a74dbcee7ede203b306bb82b4b42 194 Gene3D G3DSA:1.10.8.10 147 193 6.8E-9 T 11-10-2018 XFUD_08245 c5d4a74dbcee7ede203b306bb82b4b42 194 SUPERFAMILY SSF50249 1 63 1.43E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_08245 c5d4a74dbcee7ede203b306bb82b4b42 194 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 193 30.781 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 XFUD_08245 c5d4a74dbcee7ede203b306bb82b4b42 194 SUPERFAMILY SSF46929 148 191 2.22E-7 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily XFUD_08245 c5d4a74dbcee7ede203b306bb82b4b42 194 Gene3D G3DSA:1.10.150.20 67 141 1.7E-24 T 11-10-2018 XFUD_08245 c5d4a74dbcee7ede203b306bb82b4b42 194 SUPERFAMILY SSF47781 67 136 2.0E-20 T 11-10-2018 IPR010994 RuvA domain 2-like XFUD_08245 c5d4a74dbcee7ede203b306bb82b4b42 194 Pfam PF07499 RuvA, C-terminal domain 150 191 4.3E-7 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 XFUD_08245 c5d4a74dbcee7ede203b306bb82b4b42 194 Pfam PF01330 RuvA N terminal domain 1 62 4.4E-18 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 XFUD_08245 c5d4a74dbcee7ede203b306bb82b4b42 194 Pfam PF14520 Helix-hairpin-helix domain 72 130 5.8E-17 T 11-10-2018 XFUD_08245 c5d4a74dbcee7ede203b306bb82b4b42 194 SMART SM00278 73 92 19.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XFUD_08245 c5d4a74dbcee7ede203b306bb82b4b42 194 SMART SM00278 108 127 0.31 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XFUD_08245 c5d4a74dbcee7ede203b306bb82b4b42 194 Gene3D G3DSA:2.40.50.140 1 66 6.9E-23 T 11-10-2018 XFUD_04180 7ae5504ea29652568287c0949949bd7f 449 Gene3D G3DSA:1.10.3860.10 14 429 2.8E-113 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XFUD_04180 7ae5504ea29652568287c0949949bd7f 449 Pfam PF00375 Sodium:dicarboxylate symporter family 23 415 3.9E-100 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 XFUD_04180 7ae5504ea29652568287c0949949bd7f 449 SUPERFAMILY SSF118215 23 416 2.22E-111 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XFUD_04180 7ae5504ea29652568287c0949949bd7f 449 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 50 65 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site XFUD_04180 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 341 360 2.0E-35 T 11-10-2018 XFUD_04180 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 2.0E-35 T 11-10-2018 XFUD_04180 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 88 113 2.0E-35 T 11-10-2018 XFUD_04180 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 2.0E-35 T 11-10-2018 XFUD_04180 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 17 37 2.0E-35 T 11-10-2018 XFUD_04180 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 232 251 2.0E-35 T 11-10-2018 XFUD_04180 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 306 332 2.0E-35 T 11-10-2018 XFUD_04180 7ae5504ea29652568287c0949949bd7f 449 PRINTS PR00173 Glutamate-aspartate symporter signature 58 78 2.0E-35 T 11-10-2018 XFUD_04180 7ae5504ea29652568287c0949949bd7f 449 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 16 442 37.679 T 11-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 XFUD_04180 7ae5504ea29652568287c0949949bd7f 449 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 309 332 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Pfam PF00384 Molybdopterin oxidoreductase 285 414 1.5E-13 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Pfam PF00384 Molybdopterin oxidoreductase 445 608 6.0E-9 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 89 3.3E-19 T 11-10-2018 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 SUPERFAMILY SSF54862 89 223 6.7E-37 T 11-10-2018 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 SUPERFAMILY SSF53706 226 630 2.22E-74 T 11-10-2018 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 SMART SM00929 96 136 3.4E-20 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Gene3D G3DSA:3.10.20.740 14 136 1.0E-40 T 11-10-2018 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 158 168 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Gene3D G3DSA:3.40.50.740 226 424 1.2E-9 T 11-10-2018 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 SUPERFAMILY SSF50692 678 735 8.36E-10 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Gene3D G3DSA:3.30.70.20 138 217 1.3E-7 T 11-10-2018 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 44 61 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Gene3D G3DSA:3.40.50.740 432 637 6.4E-12 T 11-10-2018 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 SUPERFAMILY SSF54292 15 87 1.72E-18 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 17 607 9.1E-211 T 11-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Pfam PF01568 Molydopterin dinucleotide binding domain 676 730 2.4E-8 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 111 123 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Gene3D G3DSA:2.40.40.20 638 739 1.2E-7 T 11-10-2018 XFUD_01350 e0ecd5c5184a33ad25e2fbe7eb7139b2 744 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 96 133 1.4E-16 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_08255 e6caa10c01862e987ea9db4b4f23776f 244 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 6 236 1.2E-87 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_08255 e6caa10c01862e987ea9db4b4f23776f 244 SUPERFAMILY SSF75625 7 237 4.45E-83 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_08255 e6caa10c01862e987ea9db4b4f23776f 244 Pfam PF01709 Transcriptional regulator 7 236 3.0E-85 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_08255 e6caa10c01862e987ea9db4b4f23776f 244 Gene3D G3DSA:3.30.70.980 127 204 3.3E-50 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_08255 e6caa10c01862e987ea9db4b4f23776f 244 Gene3D G3DSA:1.10.10.200 15 78 4.1E-26 T 11-10-2018 IPR017856 Integrase-like, N-terminal XFUD_08255 e6caa10c01862e987ea9db4b4f23776f 244 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 2 238 31.998 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_08255 e6caa10c01862e987ea9db4b4f23776f 244 Gene3D G3DSA:3.30.70.980 82 235 3.3E-50 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_07785 7b6a6cac1852e577b1c2988dbd3ea118 172 Gene3D G3DSA:3.10.420.10 3 167 4.8E-53 T 11-10-2018 IPR035958 SecB-like superfamily XFUD_07785 7b6a6cac1852e577b1c2988dbd3ea118 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 23 40 4.1E-36 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XFUD_07785 7b6a6cac1852e577b1c2988dbd3ea118 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 107 129 4.1E-36 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XFUD_07785 7b6a6cac1852e577b1c2988dbd3ea118 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 133 151 4.1E-36 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XFUD_07785 7b6a6cac1852e577b1c2988dbd3ea118 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 83 103 4.1E-36 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XFUD_07785 7b6a6cac1852e577b1c2988dbd3ea118 172 Pfam PF02556 Preprotein translocase subunit SecB 18 153 2.1E-51 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XFUD_07785 7b6a6cac1852e577b1c2988dbd3ea118 172 Hamap MF_00821 Protein-export protein SecB [secB]. 1 155 31.28 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XFUD_07785 7b6a6cac1852e577b1c2988dbd3ea118 172 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 19 151 3.8E-46 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 XFUD_07785 7b6a6cac1852e577b1c2988dbd3ea118 172 SUPERFAMILY SSF54611 19 150 9.81E-46 T 11-10-2018 IPR035958 SecB-like superfamily XFUD_04565 5549c01716cd5c47242ab8d57970371e 261 Pfam PF13534 4Fe-4S dicluster domain 171 244 6.7E-10 T 11-10-2018 XFUD_04565 5549c01716cd5c47242ab8d57970371e 261 SUPERFAMILY SSF46548 131 258 5.06E-40 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XFUD_04565 5549c01716cd5c47242ab8d57970371e 261 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 253 5.5E-84 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04565 5549c01716cd5c47242ab8d57970371e 261 SUPERFAMILY SSF54292 28 129 3.19E-30 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 XFUD_04565 5549c01716cd5c47242ab8d57970371e 261 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 XFUD_04565 5549c01716cd5c47242ab8d57970371e 261 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 134 6.7E-34 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04565 5549c01716cd5c47242ab8d57970371e 261 Gene3D G3DSA:1.10.1060.10 130 261 5.9E-59 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XFUD_04565 5549c01716cd5c47242ab8d57970371e 261 Gene3D G3DSA:3.10.20.30 19 129 1.0E-44 T 11-10-2018 IPR012675 Beta-grasp domain superfamily XFUD_04565 5549c01716cd5c47242ab8d57970371e 261 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XFUD_07840 a1828a0e879ff91c057197b4d908664f 683 Gene3D G3DSA:3.10.620.30 340 502 2.1E-24 T 11-10-2018 XFUD_07840 a1828a0e879ff91c057197b4d908664f 683 Pfam PF01841 Transglutaminase-like superfamily 365 471 5.6E-27 T 11-10-2018 IPR002931 Transglutaminase-like XFUD_07840 a1828a0e879ff91c057197b4d908664f 683 SUPERFAMILY SSF54001 275 582 3.38E-61 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XFUD_07840 a1828a0e879ff91c057197b4d908664f 683 SMART SM00460 402 473 3.4E-19 T 11-10-2018 IPR002931 Transglutaminase-like XFUD_07840 a1828a0e879ff91c057197b4d908664f 683 Pfam PF11992 Domain of unknown function (DUF3488) 14 325 2.9E-73 T 11-10-2018 IPR021878 Protein of unknown function DUF3488 XFUD_03540 57267c913020051b404158bae3c131c6 792 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 7 750 19.112 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 XFUD_03540 57267c913020051b404158bae3c131c6 792 Pfam PF04453 Organic solvent tolerance protein 296 689 3.4E-93 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 XFUD_08695 aa7cba501d60491b2b193c6a3086c4dd 191 Gene3D G3DSA:3.40.109.10 7 169 5.5E-35 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 XFUD_08695 aa7cba501d60491b2b193c6a3086c4dd 191 PIRSF PIRSF000232 3 191 1.2E-60 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like XFUD_08695 aa7cba501d60491b2b193c6a3086c4dd 191 SUPERFAMILY SSF55469 8 188 8.51E-32 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 XFUD_08695 aa7cba501d60491b2b193c6a3086c4dd 191 Pfam PF00881 Nitroreductase family 12 168 2.0E-20 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 XFUD_03530 00be341ad32e55407da52131d104d395 393 SUPERFAMILY SSF51905 7 386 9.72E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_03530 00be341ad32e55407da52131d104d395 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.5E-20 T 11-10-2018 XFUD_03530 00be341ad32e55407da52131d104d395 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.5E-20 T 11-10-2018 XFUD_03530 00be341ad32e55407da52131d104d395 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.5E-20 T 11-10-2018 XFUD_03530 00be341ad32e55407da52131d104d395 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.5E-20 T 11-10-2018 XFUD_03530 00be341ad32e55407da52131d104d395 393 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 XFUD_03530 00be341ad32e55407da52131d104d395 393 Gene3D G3DSA:3.50.50.60 8 339 1.9E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_03530 00be341ad32e55407da52131d104d395 393 Pfam PF01494 FAD binding domain 8 319 2.0E-31 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 XFUD_03530 00be341ad32e55407da52131d104d395 393 Gene3D G3DSA:3.30.9.50 82 270 1.9E-108 T 11-10-2018 XFUD_03530 00be341ad32e55407da52131d104d395 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 391 1.7E-133 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 XFUD_10200 262882e385cb6ca0b06a91bc7dd42771 146 SUPERFAMILY SSF55961 1 139 3.05E-24 T 11-10-2018 XFUD_10200 262882e385cb6ca0b06a91bc7dd42771 146 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 134 1.4E-25 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 XFUD_10200 262882e385cb6ca0b06a91bc7dd42771 146 Gene3D G3DSA:3.30.530.20 5 141 3.4E-23 T 11-10-2018 IPR023393 START-like domain superfamily XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 Gene3D G3DSA:3.40.50.880 1013 1322 7.8E-121 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 SUPERFAMILY SSF56042 421 679 9.42E-49 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 Gene3D G3DSA:3.30.1330.10 206 411 6.8E-39 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 SMART SM01211 1070 1321 3.5E-138 T 11-10-2018 XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 Gene3D G3DSA:1.10.8.750 151 205 2.6E-19 T 11-10-2018 XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1321 0.0 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 SUPERFAMILY SSF55326 643 840 2.88E-62 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1070 1321 2.7E-96 T 11-10-2018 XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1322 19.827 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 Pfam PF02769 AIR synthase related protein, C-terminal domain 889 982 2.0E-7 T 11-10-2018 IPR010918 PurM-like, C-terminal domain XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 Pfam PF02769 AIR synthase related protein, C-terminal domain 421 578 6.1E-32 T 11-10-2018 IPR010918 PurM-like, C-terminal domain XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 SUPERFAMILY SSF56042 847 1063 1.29E-46 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 Gene3D G3DSA:3.90.650.10 832 1012 5.4E-27 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 Gene3D G3DSA:3.90.650.10 412 592 1.2E-51 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 Gene3D G3DSA:3.30.1330.10 648 831 2.0E-22 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 SUPERFAMILY SSF55326 213 416 5.23E-48 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 SUPERFAMILY SSF109736 161 212 3.14E-17 T 11-10-2018 XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 SUPERFAMILY SSF52317 1067 1321 1.15E-89 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_05990 ed5b8900b0d17eb0870bdf5b5557929f 1322 SUPERFAMILY SSF82697 1 148 5.75E-33 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFUD_04125 4da2841fa9753dc07f39ac54ad7fb02e 302 Pfam PF00701 Dihydrodipicolinate synthetase family 3 277 1.9E-75 T 11-10-2018 IPR002220 DapA-like GO:0016829 XFUD_04125 4da2841fa9753dc07f39ac54ad7fb02e 302 SUPERFAMILY SSF51569 3 281 1.15E-81 T 11-10-2018 XFUD_04125 4da2841fa9753dc07f39ac54ad7fb02e 302 PIRSF PIRSF001365 2 296 7.3E-77 T 11-10-2018 IPR002220 DapA-like GO:0016829 XFUD_04125 4da2841fa9753dc07f39ac54ad7fb02e 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 1.8E-25 T 11-10-2018 IPR002220 DapA-like GO:0016829 XFUD_04125 4da2841fa9753dc07f39ac54ad7fb02e 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 1.8E-25 T 11-10-2018 IPR002220 DapA-like GO:0016829 XFUD_04125 4da2841fa9753dc07f39ac54ad7fb02e 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.8E-25 T 11-10-2018 IPR002220 DapA-like GO:0016829 XFUD_04125 4da2841fa9753dc07f39ac54ad7fb02e 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.8E-25 T 11-10-2018 IPR002220 DapA-like GO:0016829 XFUD_04125 4da2841fa9753dc07f39ac54ad7fb02e 302 Gene3D G3DSA:3.20.20.70 2 289 4.8E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_04125 4da2841fa9753dc07f39ac54ad7fb02e 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 XFUD_04125 4da2841fa9753dc07f39ac54ad7fb02e 302 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFUD_04125 4da2841fa9753dc07f39ac54ad7fb02e 302 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 278 2.2E-77 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFUD_04125 4da2841fa9753dc07f39ac54ad7fb02e 302 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 287 50.273 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFUD_04125 4da2841fa9753dc07f39ac54ad7fb02e 302 SMART SM01130 2 289 9.3E-105 T 11-10-2018 IPR002220 DapA-like GO:0016829 XFUD_09940 01e1079646bce0d4b058688ca6481755 353 Gene3D G3DSA:1.10.443.10 177 348 2.6E-19 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFUD_09940 01e1079646bce0d4b058688ca6481755 353 Gene3D G3DSA:1.10.150.130 72 175 2.4E-9 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFUD_09940 01e1079646bce0d4b058688ca6481755 353 Pfam PF00589 Phage integrase family 190 345 3.2E-6 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFUD_09940 01e1079646bce0d4b058688ca6481755 353 SUPERFAMILY SSF56349 74 345 4.41E-37 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 Gene3D G3DSA:1.10.1740.60 244 340 1.2E-43 T 11-10-2018 XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 227 242 1.0E-16 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 347 359 1.0E-16 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 311 1.0E-16 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 328 343 1.0E-16 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 1.0E-16 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 Pfam PF01433 Peptidase family M1 domain 253 465 6.9E-49 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 Gene3D G3DSA:1.25.40.320 497 637 1.2E-39 T 11-10-2018 IPR038502 Peptidase M1 LTA-4 hydrolase/aminopeptidase, C-terminal domain superfamily XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 Gene3D G3DSA:1.10.390.10 341 495 3.0E-43 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 SUPERFAMILY SSF63737 45 244 2.35E-38 T 11-10-2018 XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 Gene3D G3DSA:2.60.40.1730 57 243 1.5E-57 T 11-10-2018 XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 525 635 3.1E-27 T 11-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 SUPERFAMILY SSF48371 503 636 4.78E-39 T 11-10-2018 IPR016024 Armadillo-type fold XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 SMART SM01263 497 636 2.4E-49 T 11-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 XFUD_06275 1625c2f196ec79cb28a5951203e7580b 651 SUPERFAMILY SSF55486 249 491 6.89E-66 T 11-10-2018 XFUD_04435 3b4dd3472fe473c77a2f829ef1d9a999 338 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 89 1.3E-20 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 XFUD_04435 3b4dd3472fe473c77a2f829ef1d9a999 338 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 35.035 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 XFUD_04435 3b4dd3472fe473c77a2f829ef1d9a999 338 SUPERFAMILY SSF51161 33 318 9.43E-76 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFUD_04435 3b4dd3472fe473c77a2f829ef1d9a999 338 Gene3D G3DSA:2.160.10.10 98 309 3.4E-60 T 11-10-2018 XFUD_04435 3b4dd3472fe473c77a2f829ef1d9a999 338 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 260 285 0.089 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_04435 3b4dd3472fe473c77a2f829ef1d9a999 338 Gene3D G3DSA:3.40.1390.10 3 97 3.4E-28 T 11-10-2018 XFUD_04435 3b4dd3472fe473c77a2f829ef1d9a999 338 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 140 180 2.3E-5 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_04435 3b4dd3472fe473c77a2f829ef1d9a999 338 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 199 215 0.0026 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_04435 3b4dd3472fe473c77a2f829ef1d9a999 338 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 257 1.9E-6 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_04435 3b4dd3472fe473c77a2f829ef1d9a999 338 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 1.9E-132 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 XFUD_11745 946688b1de5ffead4511400fbe5bc46c 484 SUPERFAMILY SSF50156 109 191 2.55E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFUD_11745 946688b1de5ffead4511400fbe5bc46c 484 SMART SM00245 181 373 4.3E-64 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XFUD_11745 946688b1de5ffead4511400fbe5bc46c 484 SUPERFAMILY SSF52096 45 375 4.47E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFUD_11745 946688b1de5ffead4511400fbe5bc46c 484 SMART SM00228 110 179 4.4E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFUD_11745 946688b1de5ffead4511400fbe5bc46c 484 Gene3D G3DSA:3.30.750.44 58 348 2.3E-89 T 11-10-2018 XFUD_11745 946688b1de5ffead4511400fbe5bc46c 484 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 63 373 5.8E-92 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 XFUD_11745 946688b1de5ffead4511400fbe5bc46c 484 Pfam PF03572 Peptidase family S41 207 370 4.4E-51 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XFUD_11745 946688b1de5ffead4511400fbe5bc46c 484 Gene3D G3DSA:3.90.226.10 196 370 2.3E-89 T 11-10-2018 XFUD_11745 946688b1de5ffead4511400fbe5bc46c 484 Pfam PF13180 PDZ domain 111 187 4.6E-12 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFUD_11745 946688b1de5ffead4511400fbe5bc46c 484 Gene3D G3DSA:2.30.42.10 110 195 2.3E-89 T 11-10-2018 XFUD_08235 6af40a1c7b12344185a87ce581f1ebda 343 SUPERFAMILY SSF46785 257 328 1.97E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_08235 6af40a1c7b12344185a87ce581f1ebda 343 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 1.9E-32 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 XFUD_08235 6af40a1c7b12344185a87ce581f1ebda 343 Gene3D G3DSA:1.10.10.10 257 335 3.4E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_08235 6af40a1c7b12344185a87ce581f1ebda 343 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 343 174.085 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 XFUD_08235 6af40a1c7b12344185a87ce581f1ebda 343 Gene3D G3DSA:1.10.8.60 182 255 1.4E-30 T 11-10-2018 XFUD_08235 6af40a1c7b12344185a87ce581f1ebda 343 SMART SM00382 51 182 2.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_08235 6af40a1c7b12344185a87ce581f1ebda 343 Gene3D G3DSA:3.40.50.300 18 181 1.6E-37 T 11-10-2018 XFUD_08235 6af40a1c7b12344185a87ce581f1ebda 343 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 235 5.7E-117 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 XFUD_08235 6af40a1c7b12344185a87ce581f1ebda 343 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 250 333 3.0E-42 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 XFUD_08235 6af40a1c7b12344185a87ce581f1ebda 343 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 23 326 2.1E-144 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 XFUD_08235 6af40a1c7b12344185a87ce581f1ebda 343 SUPERFAMILY SSF52540 20 252 1.41E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11430 9dff8cc284ddde098e80db965be55204 690 Gene3D G3DSA:3.30.70.270 259 431 1.4E-25 T 11-10-2018 XFUD_11430 9dff8cc284ddde098e80db965be55204 690 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 426 1.2E-13 T 11-10-2018 IPR000160 GGDEF domain XFUD_11430 9dff8cc284ddde098e80db965be55204 690 SUPERFAMILY SSF55073 275 433 6.12E-19 T 11-10-2018 IPR029787 Nucleotide cyclase XFUD_11430 9dff8cc284ddde098e80db965be55204 690 SMART SM00052 443 690 1.3E-27 T 11-10-2018 IPR001633 EAL domain XFUD_11430 9dff8cc284ddde098e80db965be55204 690 SUPERFAMILY SSF141868 449 680 1.7E-46 T 11-10-2018 IPR035919 EAL domain superfamily XFUD_11430 9dff8cc284ddde098e80db965be55204 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 250 1.2E-8 T 11-10-2018 IPR000014 PAS domain XFUD_11430 9dff8cc284ddde098e80db965be55204 690 SUPERFAMILY SSF52172 8 164 2.69E-7 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_11430 9dff8cc284ddde098e80db965be55204 690 Pfam PF00989 PAS fold 147 251 9.3E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 XFUD_11430 9dff8cc284ddde098e80db965be55204 690 SMART SM00267 258 431 2.0E-7 T 11-10-2018 IPR000160 GGDEF domain XFUD_11430 9dff8cc284ddde098e80db965be55204 690 Pfam PF00563 EAL domain 449 681 2.4E-51 T 11-10-2018 IPR001633 EAL domain XFUD_11430 9dff8cc284ddde098e80db965be55204 690 SMART SM00091 144 210 0.0099 T 11-10-2018 IPR000014 PAS domain XFUD_11430 9dff8cc284ddde098e80db965be55204 690 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 428 5.7E-13 T 11-10-2018 IPR000160 GGDEF domain XFUD_11430 9dff8cc284ddde098e80db965be55204 690 Gene3D G3DSA:3.20.20.450 432 690 1.0E-64 T 11-10-2018 IPR035919 EAL domain superfamily XFUD_11430 9dff8cc284ddde098e80db965be55204 690 SUPERFAMILY SSF55785 132 251 3.24E-13 T 11-10-2018 IPR035965 PAS domain superfamily XFUD_11430 9dff8cc284ddde098e80db965be55204 690 Gene3D G3DSA:3.30.450.20 131 253 2.0E-13 T 11-10-2018 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 SUPERFAMILY SSF52540 546 858 1.3E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:3.40.50.300 550 767 1.9E-86 T 11-10-2018 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:1.10.8.60 769 861 4.1E-27 T 11-10-2018 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 763 1.8E-55 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:1.10.1780.10 1 147 1.0E-30 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 2.0E-9 T 11-10-2018 IPR004176 Clp, N-terminal XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.6E-11 T 11-10-2018 IPR004176 Clp, N-terminal XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:3.40.50.300 148 342 6.6E-74 T 11-10-2018 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 5.6E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 SMART SM01086 769 858 8.0E-36 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 SUPERFAMILY SSF52540 159 545 3.28E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.2E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.2E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.2E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.2E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 Gene3D G3DSA:3.40.50.300 343 544 1.4E-69 T 11-10-2018 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 849 5.8E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 SUPERFAMILY SSF81923 4 156 5.3E-37 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 SMART SM00382 198 344 2.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_01605 4a609b79c32900205e848cad2b7228d1 861 SMART SM00382 597 770 1.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_04405 699c982d3d08dd13cf65a1c09ec416d7 480 Gene3D G3DSA:3.40.50.1480 15 480 2.1E-231 T 11-10-2018 XFUD_04405 699c982d3d08dd13cf65a1c09ec416d7 480 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 260 276 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFUD_04405 699c982d3d08dd13cf65a1c09ec416d7 480 Gene3D G3DSA:3.40.50.720 241 401 2.1E-231 T 11-10-2018 XFUD_04405 699c982d3d08dd13cf65a1c09ec416d7 480 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 472 3.1E-189 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFUD_04405 699c982d3d08dd13cf65a1c09ec416d7 480 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 238 400 3.1E-80 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFUD_04405 699c982d3d08dd13cf65a1c09ec416d7 480 SMART SM00996 12 479 0.0 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFUD_04405 699c982d3d08dd13cf65a1c09ec416d7 480 PIRSF PIRSF001109 1 480 1.1E-192 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFUD_04405 699c982d3d08dd13cf65a1c09ec416d7 480 SMART SM00997 238 400 2.4E-109 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFUD_04405 699c982d3d08dd13cf65a1c09ec416d7 480 SUPERFAMILY SSF51735 238 400 4.79E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_04405 699c982d3d08dd13cf65a1c09ec416d7 480 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 13 479 2.6E-146 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFUD_04405 699c982d3d08dd13cf65a1c09ec416d7 480 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 XFUD_04405 699c982d3d08dd13cf65a1c09ec416d7 480 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 472 48.235 T 11-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 XFUD_04405 699c982d3d08dd13cf65a1c09ec416d7 480 SUPERFAMILY SSF52283 11 480 2.72E-113 T 11-10-2018 XFUD_09615 25132c737f5ec9ec82fa348075a294ee 483 Gene3D G3DSA:1.20.1740.10 25 481 1.3E-123 T 11-10-2018 XFUD_09615 25132c737f5ec9ec82fa348075a294ee 483 PIRSF PIRSF006060 12 482 4.3E-96 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XFUD_09615 25132c737f5ec9ec82fa348075a294ee 483 Pfam PF13520 Amino acid permease 35 451 3.3E-58 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XFUD_08325 e7b155ba5d2d21aa55ca459f9f001222 230 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 113 216 1.1E-38 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_08325 e7b155ba5d2d21aa55ca459f9f001222 230 SUPERFAMILY SSF46609 13 106 8.9E-33 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_08325 e7b155ba5d2d21aa55ca459f9f001222 230 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 22 105 1.3E-27 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_08325 e7b155ba5d2d21aa55ca459f9f001222 230 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 184 191 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_08325 e7b155ba5d2d21aa55ca459f9f001222 230 Gene3D G3DSA:2.40.500.20 111 230 1.2E-45 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_08325 e7b155ba5d2d21aa55ca459f9f001222 230 PIRSF PIRSF000349 2 227 1.5E-78 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_08325 e7b155ba5d2d21aa55ca459f9f001222 230 PRINTS PR01703 Manganese superoxide dismutase signature 25 36 5.8E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_08325 e7b155ba5d2d21aa55ca459f9f001222 230 PRINTS PR01703 Manganese superoxide dismutase signature 142 150 5.8E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_08325 e7b155ba5d2d21aa55ca459f9f001222 230 PRINTS PR01703 Manganese superoxide dismutase signature 182 194 5.8E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_08325 e7b155ba5d2d21aa55ca459f9f001222 230 PRINTS PR01703 Manganese superoxide dismutase signature 46 59 5.8E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_08325 e7b155ba5d2d21aa55ca459f9f001222 230 PRINTS PR01703 Manganese superoxide dismutase signature 88 101 5.8E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_08325 e7b155ba5d2d21aa55ca459f9f001222 230 SUPERFAMILY SSF54719 109 223 9.17E-43 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_08325 e7b155ba5d2d21aa55ca459f9f001222 230 Gene3D G3DSA:1.10.287.990 39 105 4.5E-23 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 Gene3D G3DSA:3.30.420.110 140 272 1.2E-37 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 Gene3D G3DSA:1.10.1420.10 398 514 1.2E-94 T 11-10-2018 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 699 715 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 SMART SM00534 618 810 9.1E-107 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 Gene3D G3DSA:3.40.50.300 579 864 4.6E-95 T 11-10-2018 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 Pfam PF00488 MutS domain V 621 813 1.0E-81 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 Pfam PF05190 MutS family domain IV 439 529 4.0E-29 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 SMART SM00533 295 602 1.2E-94 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 SUPERFAMILY SSF53150 126 278 1.7E-40 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 Gene3D G3DSA:3.40.1170.10 13 133 2.7E-48 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 PIRSF PIRSF037677 228 856 5.2E-116 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 PIRSF PIRSF037677 13 201 3.2E-25 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 Pfam PF05192 MutS domain III 281 570 2.9E-39 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 Pfam PF01624 MutS domain I 20 131 1.4E-40 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 19 870 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 19 865 24.613 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 Gene3D G3DSA:1.10.1420.10 278 570 1.2E-94 T 11-10-2018 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 SUPERFAMILY SSF52540 578 814 1.26E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 SUPERFAMILY SSF48334 279 576 3.53E-83 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 SUPERFAMILY SSF55271 14 127 4.71E-42 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 XFUD_07345 cc4fd3580e7a97fe0dad387734be081c 873 Pfam PF05188 MutS domain II 141 264 8.8E-30 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 XFUD_06565 8847672a326b36452704c0beedc50afe 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 450 6.3E-116 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFUD_06565 8847672a326b36452704c0beedc50afe 455 Gene3D G3DSA:1.10.40.30 382 445 8.0E-152 T 11-10-2018 XFUD_06565 8847672a326b36452704c0beedc50afe 455 Gene3D G3DSA:1.10.275.10 1 117 1.3E-41 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal XFUD_06565 8847672a326b36452704c0beedc50afe 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 5.7E-18 T 11-10-2018 IPR000362 Fumarate lyase family XFUD_06565 8847672a326b36452704c0beedc50afe 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 5.7E-18 T 11-10-2018 IPR000362 Fumarate lyase family XFUD_06565 8847672a326b36452704c0beedc50afe 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 5.7E-18 T 11-10-2018 IPR000362 Fumarate lyase family XFUD_06565 8847672a326b36452704c0beedc50afe 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 5.7E-18 T 11-10-2018 IPR000362 Fumarate lyase family XFUD_06565 8847672a326b36452704c0beedc50afe 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 XFUD_06565 8847672a326b36452704c0beedc50afe 455 Gene3D G3DSA:1.20.200.10 118 446 8.0E-152 T 11-10-2018 XFUD_06565 8847672a326b36452704c0beedc50afe 455 Pfam PF00206 Lyase 14 312 3.0E-59 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal XFUD_06565 8847672a326b36452704c0beedc50afe 455 SUPERFAMILY SSF48557 5 439 1.08E-97 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 XFUD_06565 8847672a326b36452704c0beedc50afe 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 6.4E-48 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 XFUD_00730 f2fd689b2f22953174e2eaa3edc90c71 282 Pfam PF01578 Cytochrome C assembly protein 36 260 1.4E-37 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 XFUD_00535 a571d3cb98cec1a281e5ab299430a7a7 607 Pfam PF07731 Multicopper oxidase 493 606 2.4E-26 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 XFUD_00535 a571d3cb98cec1a281e5ab299430a7a7 607 Gene3D G3DSA:2.60.40.420 35 169 4.2E-41 T 11-10-2018 IPR008972 Cupredoxin XFUD_00535 a571d3cb98cec1a281e5ab299430a7a7 607 SUPERFAMILY SSF49503 174 384 8.94E-54 T 11-10-2018 IPR008972 Cupredoxin XFUD_00535 a571d3cb98cec1a281e5ab299430a7a7 607 ProSitePatterns PS00080 Multicopper oxidases signature 2. 588 599 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 XFUD_00535 a571d3cb98cec1a281e5ab299430a7a7 607 Pfam PF07732 Multicopper oxidase 59 169 6.0E-40 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 XFUD_00535 a571d3cb98cec1a281e5ab299430a7a7 607 Gene3D G3DSA:2.60.40.420 486 606 2.7E-31 T 11-10-2018 IPR008972 Cupredoxin XFUD_00535 a571d3cb98cec1a281e5ab299430a7a7 607 SUPERFAMILY SSF49503 45 201 2.99E-42 T 11-10-2018 IPR008972 Cupredoxin XFUD_00535 a571d3cb98cec1a281e5ab299430a7a7 607 Gene3D G3DSA:2.60.40.420 175 384 1.1E-37 T 11-10-2018 IPR008972 Cupredoxin XFUD_00535 a571d3cb98cec1a281e5ab299430a7a7 607 ProSitePatterns PS00079 Multicopper oxidases signature 1. 145 165 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site XFUD_00535 a571d3cb98cec1a281e5ab299430a7a7 607 ProSitePatterns PS00079 Multicopper oxidases signature 1. 583 603 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site XFUD_00535 a571d3cb98cec1a281e5ab299430a7a7 607 SUPERFAMILY SSF49503 457 605 3.74E-37 T 11-10-2018 IPR008972 Cupredoxin XFUD_00535 a571d3cb98cec1a281e5ab299430a7a7 607 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 39 3.6E-6 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal XFUD_00535 a571d3cb98cec1a281e5ab299430a7a7 607 Pfam PF00394 Multicopper oxidase 181 357 5.0E-31 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 XFUD_00535 a571d3cb98cec1a281e5ab299430a7a7 607 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 8 606 0.0 T 11-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 XFUD_00765 c4b993594a6d50576b776817b75c80b8 257 Pfam PF05433 Glycine zipper 2TM domain 104 144 3.5E-9 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 XFUD_09710 14e52355ebde8466d9b02035f4e957cb 155 Gene3D G3DSA:3.30.420.140 10 147 1.3E-33 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 XFUD_09710 14e52355ebde8466d9b02035f4e957cb 155 SMART SM00732 11 111 7.9E-30 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 XFUD_09710 14e52355ebde8466d9b02035f4e957cb 155 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 14 145 2.4E-28 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 XFUD_09710 14e52355ebde8466d9b02035f4e957cb 155 SUPERFAMILY SSF53098 11 146 6.68E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFUD_09710 14e52355ebde8466d9b02035f4e957cb 155 Pfam PF03652 Holliday junction resolvase 12 146 2.2E-34 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 XFUD_09710 14e52355ebde8466d9b02035f4e957cb 155 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 11 149 20.632 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 XFUD_07820 fffa661c3b2e4ecc28d9857abfe5c8cc 106 SUPERFAMILY SSF82607 9 100 2.62E-31 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily XFUD_07820 fffa661c3b2e4ecc28d9857abfe5c8cc 106 PIRSF PIRSF004555 1 106 1.2E-36 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XFUD_07820 fffa661c3b2e4ecc28d9857abfe5c8cc 106 Pfam PF02575 YbaB/EbfC DNA-binding family 9 96 7.4E-33 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XFUD_07820 fffa661c3b2e4ecc28d9857abfe5c8cc 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 102 4.1E-32 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XFUD_07820 fffa661c3b2e4ecc28d9857abfe5c8cc 106 Gene3D G3DSA:3.30.1310.10 1 106 7.3E-42 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily XFUD_07820 fffa661c3b2e4ecc28d9857abfe5c8cc 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 95 22.167 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family XFUD_11555 bbe01f07bf28b1e965f84fb415cd6e7c 216 Gene3D G3DSA:2.50.20.10 41 212 7.5E-35 T 11-10-2018 XFUD_11555 bbe01f07bf28b1e965f84fb415cd6e7c 216 Pfam PF03550 Outer membrane lipoprotein LolB 60 211 4.0E-34 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 XFUD_11555 bbe01f07bf28b1e965f84fb415cd6e7c 216 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 17 211 7.3E-18 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 XFUD_11555 bbe01f07bf28b1e965f84fb415cd6e7c 216 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 10 213 22.648 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 XFUD_11555 bbe01f07bf28b1e965f84fb415cd6e7c 216 SUPERFAMILY SSF89392 42 212 3.41E-37 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX XFUD_08425 07db1ba4bb7873b344aa32f53acb9a3a 722 Pfam PF01432 Peptidase family M3 269 720 2.0E-132 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 XFUD_08425 07db1ba4bb7873b344aa32f53acb9a3a 722 Gene3D G3DSA:1.10.1370.40 72 715 4.6E-246 T 11-10-2018 XFUD_08425 07db1ba4bb7873b344aa32f53acb9a3a 722 Gene3D G3DSA:1.10.1370.10 183 653 4.6E-246 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 XFUD_08425 07db1ba4bb7873b344aa32f53acb9a3a 722 SUPERFAMILY SSF55486 42 720 3.08E-180 T 11-10-2018 XFUD_07290 02018f532a62900de26e45972a26e653 186 Pfam PF11041 Protein of unknown function (DUF2612) 3 68 6.5E-14 T 11-10-2018 IPR021283 Protein of unknown function DUF2612 XFUD_07290 02018f532a62900de26e45972a26e653 186 Pfam PF11041 Protein of unknown function (DUF2612) 76 158 4.1E-25 T 11-10-2018 IPR021283 Protein of unknown function DUF2612 XFUD_07875 67c0591984c2098ceac94bcc9d53fc95 519 SUPERFAMILY SSF51569 8 298 3.91E-94 T 11-10-2018 XFUD_07875 67c0591984c2098ceac94bcc9d53fc95 519 Pfam PF00682 HMGL-like 11 279 4.3E-89 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 XFUD_07875 67c0591984c2098ceac94bcc9d53fc95 519 SMART SM00917 376 504 2.0E-26 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XFUD_07875 67c0591984c2098ceac94bcc9d53fc95 519 SUPERFAMILY SSF110921 405 503 3.4E-21 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XFUD_07875 67c0591984c2098ceac94bcc9d53fc95 519 Pfam PF08502 LeuA allosteric (dimerisation) domain 377 504 5.5E-29 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XFUD_07875 67c0591984c2098ceac94bcc9d53fc95 519 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 9 513 39.643 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XFUD_07875 67c0591984c2098ceac94bcc9d53fc95 519 Gene3D G3DSA:3.30.160.270 400 505 1.6E-10 T 11-10-2018 XFUD_07875 67c0591984c2098ceac94bcc9d53fc95 519 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 206 219 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XFUD_07875 67c0591984c2098ceac94bcc9d53fc95 519 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XFUD_07875 67c0591984c2098ceac94bcc9d53fc95 519 Gene3D G3DSA:1.10.238.260 287 399 6.2E-35 T 11-10-2018 XFUD_07875 67c0591984c2098ceac94bcc9d53fc95 519 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 11 501 2.2E-193 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 XFUD_07875 67c0591984c2098ceac94bcc9d53fc95 519 Gene3D G3DSA:3.20.20.70 9 283 1.5E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_05925 b35937560c69a6e0080da2aa59d2d654 240 SMART SM00382 26 212 1.3E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_05925 b35937560c69a6e0080da2aa59d2d654 240 Gene3D G3DSA:3.40.50.300 1 240 5.8E-69 T 11-10-2018 XFUD_05925 b35937560c69a6e0080da2aa59d2d654 240 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 235 1.4E-6 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal XFUD_05925 b35937560c69a6e0080da2aa59d2d654 240 SUPERFAMILY SSF52540 2 236 3.03E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05925 b35937560c69a6e0080da2aa59d2d654 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 2 240 3.5E-113 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 XFUD_05925 b35937560c69a6e0080da2aa59d2d654 240 Pfam PF00005 ABC transporter 20 165 6.4E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_11575 809ce50a393507a73f5a881ac0642955 724 SUPERFAMILY SSF53335 414 720 5.47E-56 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_11575 809ce50a393507a73f5a881ac0642955 724 Gene3D G3DSA:3.30.2130.30 4 273 8.0E-122 T 11-10-2018 XFUD_11575 809ce50a393507a73f5a881ac0642955 724 PIRSF PIRSF037618 1 724 1.0E-254 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 XFUD_11575 809ce50a393507a73f5a881ac0642955 724 SUPERFAMILY SSF53335 143 389 1.62E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_11575 809ce50a393507a73f5a881ac0642955 724 Gene3D G3DSA:3.40.50.150 168 385 8.0E-122 T 11-10-2018 XFUD_11575 809ce50a393507a73f5a881ac0642955 724 SMART SM00981 55 153 2.6E-21 T 11-10-2018 IPR004114 THUMP domain GO:0003723 XFUD_11575 809ce50a393507a73f5a881ac0642955 724 Pfam PF02926 THUMP domain 30 152 1.1E-10 T 11-10-2018 IPR004114 THUMP domain GO:0003723 XFUD_11575 809ce50a393507a73f5a881ac0642955 724 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 198 209 - T 11-10-2018 IPR000241 Putative RNA methylase domain XFUD_11575 809ce50a393507a73f5a881ac0642955 724 Gene3D G3DSA:3.40.50.150 509 723 5.0E-62 T 11-10-2018 XFUD_11575 809ce50a393507a73f5a881ac0642955 724 Pfam PF01170 Putative RNA methylase family UPF0020 161 387 3.3E-35 T 11-10-2018 IPR000241 Putative RNA methylase domain XFUD_11575 809ce50a393507a73f5a881ac0642955 724 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 502 676 9.6E-17 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 XFUD_11575 809ce50a393507a73f5a881ac0642955 724 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 3 724 28.548 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 XFUD_11575 809ce50a393507a73f5a881ac0642955 724 Gene3D G3DSA:3.30.750.80 410 508 1.7E-30 T 11-10-2018 XFUD_00970 654d094274918b1b491585337cb6c1b4 272 Gene3D G3DSA:3.20.20.60 9 272 5.4E-100 T 11-10-2018 XFUD_00970 654d094274918b1b491585337cb6c1b4 272 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 16 270 8.4E-97 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XFUD_00970 654d094274918b1b491585337cb6c1b4 272 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 270 40.815 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XFUD_00970 654d094274918b1b491585337cb6c1b4 272 SUPERFAMILY SSF51621 10 270 3.57E-98 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XFUD_00970 654d094274918b1b491585337cb6c1b4 272 Pfam PF02548 Ketopantoate hydroxymethyltransferase 11 265 5.8E-102 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XFUD_00970 654d094274918b1b491585337cb6c1b4 272 PIRSF PIRSF000388 1 272 1.5E-94 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 XFUD_04735 765e94794ac8667d111b85f50afedef5 468 SUPERFAMILY SSF53623 118 303 5.27E-41 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFUD_04735 765e94794ac8667d111b85f50afedef5 468 Gene3D G3DSA:3.40.50.720 5 97 2.4E-5 T 11-10-2018 XFUD_04735 765e94794ac8667d111b85f50afedef5 468 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 450 5.8E-81 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XFUD_04735 765e94794ac8667d111b85f50afedef5 468 SUPERFAMILY SSF53244 310 450 6.41E-26 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFUD_04735 765e94794ac8667d111b85f50afedef5 468 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 455 25.943 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 XFUD_04735 765e94794ac8667d111b85f50afedef5 468 Gene3D G3DSA:3.40.1190.10 115 311 3.2E-41 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFUD_04735 765e94794ac8667d111b85f50afedef5 468 Pfam PF08245 Mur ligase middle domain 120 289 2.7E-24 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XFUD_04735 765e94794ac8667d111b85f50afedef5 468 Gene3D G3DSA:3.90.190.20 312 452 3.4E-28 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFUD_03040 047ac53806442d3a0db8da7b9f0c5409 195 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 118 5.3E-34 T 11-10-2018 IPR006531 Gp5 N-terminal XFUD_03040 047ac53806442d3a0db8da7b9f0c5409 195 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 193 2.4E-63 T 11-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 XFUD_03040 047ac53806442d3a0db8da7b9f0c5409 195 Gene3D G3DSA:2.60.220.40 90 157 3.4E-12 T 11-10-2018 XFUD_03040 047ac53806442d3a0db8da7b9f0c5409 195 Gene3D G3DSA:2.40.50.230 1 87 1.8E-26 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XFUD_09050 305912db50c9a55d1b5a3ce1e60b86a8 268 Pfam PF00106 short chain dehydrogenase 5 186 1.0E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_09050 305912db50c9a55d1b5a3ce1e60b86a8 268 SUPERFAMILY SSF51735 4 238 5.4E-63 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_09050 305912db50c9a55d1b5a3ce1e60b86a8 268 Gene3D G3DSA:3.40.50.720 2 250 5.8E-67 T 11-10-2018 XFUD_09050 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 1.7E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_09050 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.7E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_09050 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.7E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_09050 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 9.3E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_09050 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 9.3E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_09050 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.3E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_09050 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 9.3E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_09050 305912db50c9a55d1b5a3ce1e60b86a8 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 9.3E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 Gene3D G3DSA:1.10.630.10 1 400 2.3E-113 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 XFUD_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 Pfam PF00067 Cytochrome P450 79 368 6.0E-32 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 XFUD_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 SUPERFAMILY SSF48264 9 396 9.82E-89 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 XFUD_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 341 350 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 XFUD_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 339 348 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 348 359 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 318 333 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 131 147 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 192 214 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 273 284 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 85 96 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01510 47e54a1c98a3dc1ab9d4119c8979efb6 400 PRINTS PR00359 B-class P450 signature 290 317 6.6E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01880 a3664fae0ce773d70ebcda91b7e32cc4 379 Gene3D G3DSA:3.30.479.30 94 225 5.7E-18 T 11-10-2018 XFUD_01880 a3664fae0ce773d70ebcda91b7e32cc4 379 PRINTS PR00721 Stomatin signature 118 139 2.3E-9 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFUD_01880 a3664fae0ce773d70ebcda91b7e32cc4 379 PRINTS PR00721 Stomatin signature 70 92 2.3E-9 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFUD_01880 a3664fae0ce773d70ebcda91b7e32cc4 379 PRINTS PR00721 Stomatin signature 153 170 2.3E-9 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFUD_01880 a3664fae0ce773d70ebcda91b7e32cc4 379 PRINTS PR00721 Stomatin signature 199 217 2.3E-9 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFUD_01880 a3664fae0ce773d70ebcda91b7e32cc4 379 Pfam PF01145 SPFH domain / Band 7 family 68 238 4.8E-29 T 11-10-2018 IPR001107 Band 7 domain XFUD_01880 a3664fae0ce773d70ebcda91b7e32cc4 379 SMART SM00244 63 223 8.2E-35 T 11-10-2018 IPR001107 Band 7 domain XFUD_01880 a3664fae0ce773d70ebcda91b7e32cc4 379 SUPERFAMILY SSF117892 96 230 2.48E-20 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily XFUD_01880 a3664fae0ce773d70ebcda91b7e32cc4 379 TIGRFAM TIGR01933 hflK: HflK protein 65 322 8.3E-106 T 11-10-2018 IPR010201 HflK GO:0016021 XFUD_05855 53c81677378175ece1ad20627e40fdc0 332 Pfam PF00348 Polyprenyl synthetase 42 273 4.0E-74 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 XFUD_05855 53c81677378175ece1ad20627e40fdc0 332 Gene3D G3DSA:1.10.600.10 3 331 2.2E-103 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily XFUD_05855 53c81677378175ece1ad20627e40fdc0 332 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site XFUD_05855 53c81677378175ece1ad20627e40fdc0 332 SUPERFAMILY SSF48576 14 332 4.14E-92 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily XFUD_04115 44b2bae693a20ebd8e2502464e7bcdc5 159 SUPERFAMILY SSF52833 23 156 2.85E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_04115 44b2bae693a20ebd8e2502464e7bcdc5 159 Gene3D G3DSA:3.40.30.10 1 159 2.5E-47 T 11-10-2018 XFUD_04115 44b2bae693a20ebd8e2502464e7bcdc5 159 Pfam PF00578 AhpC/TSA family 24 135 1.1E-27 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XFUD_04115 44b2bae693a20ebd8e2502464e7bcdc5 159 PIRSF PIRSF000239 5 159 9.1E-25 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XFUD_07505 310c7507b0feacf5799806a60d643a23 409 Gene3D G3DSA:1.20.1250.20 22 406 5.5E-45 T 11-10-2018 XFUD_07505 310c7507b0feacf5799806a60d643a23 409 Pfam PF07690 Major Facilitator Superfamily 33 348 1.3E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XFUD_07505 310c7507b0feacf5799806a60d643a23 409 SUPERFAMILY SSF103473 11 404 3.92E-59 T 11-10-2018 IPR036259 MFS transporter superfamily XFUD_07145 76db20d79cf9d045cf0cb5515682a3d1 183 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 23 173 4.0E-58 T 11-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit XFUD_07145 76db20d79cf9d045cf0cb5515682a3d1 183 Pfam PF17289 Terminase RNaseH-like domain 11 169 3.1E-15 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like XFUD_04975 a9e994091f0238af32f3ddc0cfe30862 130 Gene3D G3DSA:3.30.420.80 2 130 2.5E-51 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 XFUD_04975 a9e994091f0238af32f3ddc0cfe30862 130 SUPERFAMILY SSF53137 17 130 2.55E-45 T 11-10-2018 XFUD_04975 a9e994091f0238af32f3ddc0cfe30862 130 PIRSF PIRSF002131 1 130 4.6E-51 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 XFUD_04975 a9e994091f0238af32f3ddc0cfe30862 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 31.734 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 XFUD_04975 a9e994091f0238af32f3ddc0cfe30862 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 1.7E-52 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04975 a9e994091f0238af32f3ddc0cfe30862 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site XFUD_04975 a9e994091f0238af32f3ddc0cfe30862 130 Pfam PF00411 Ribosomal protein S11 20 129 1.0E-48 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 XFUD_08200 3d44a9c51980b91c4515d605c14e9561 271 SUPERFAMILY SSF48452 145 259 9.7E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_08200 3d44a9c51980b91c4515d605c14e9561 271 Pfam PF16331 TolA binding protein trimerisation 27 98 3.4E-20 T 11-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 XFUD_08200 3d44a9c51980b91c4515d605c14e9561 271 Pfam PF13525 Outer membrane lipoprotein 144 265 2.2E-11 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like XFUD_08200 3d44a9c51980b91c4515d605c14e9561 271 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 261 2.1E-38 T 11-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal XFUD_08200 3d44a9c51980b91c4515d605c14e9561 271 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 1 264 18.705 T 11-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 XFUD_08200 3d44a9c51980b91c4515d605c14e9561 271 Gene3D G3DSA:1.25.40.10 145 271 6.1E-33 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_00335 1e701f2f0916c38726a2feaa41b8511b 901 Pfam PF13954 PapC N-terminal domain 101 243 3.5E-47 T 11-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 XFUD_00335 1e701f2f0916c38726a2feaa41b8511b 901 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 375 385 - T 11-10-2018 IPR018030 Fimbrial membrane usher, conserved site XFUD_00335 1e701f2f0916c38726a2feaa41b8511b 901 Gene3D G3DSA:2.60.40.2070 815 901 4.9E-19 T 11-10-2018 XFUD_00335 1e701f2f0916c38726a2feaa41b8511b 901 Gene3D G3DSA:2.60.40.2610 724 814 9.2E-29 T 11-10-2018 XFUD_00335 1e701f2f0916c38726a2feaa41b8511b 901 Pfam PF00577 Outer membrane usher protein 263 809 9.3E-169 T 11-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 XFUD_00335 1e701f2f0916c38726a2feaa41b8511b 901 Gene3D G3DSA:3.10.20.410 99 221 1.7E-34 T 11-10-2018 XFUD_00335 1e701f2f0916c38726a2feaa41b8511b 901 Gene3D G3DSA:2.60.40.3110 333 422 2.3E-39 T 11-10-2018 XFUD_00335 1e701f2f0916c38726a2feaa41b8511b 901 SUPERFAMILY SSF141729 122 235 3.53E-34 T 11-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 XFUD_00335 1e701f2f0916c38726a2feaa41b8511b 901 Pfam PF13953 PapC C-terminal domain 819 883 2.0E-21 T 11-10-2018 IPR025949 PapC-like, C-terminal domain XFUD_04345 4233665bba8aff808841597d132658ae 164 SMART SM00529 64 163 2.3E-29 T 11-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 XFUD_04345 4233665bba8aff808841597d132658ae 164 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 103 159 3.4E-11 T 11-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 XFUD_04345 4233665bba8aff808841597d132658ae 164 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 46 99 6.4E-11 T 11-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 XFUD_04345 4233665bba8aff808841597d132658ae 164 Gene3D G3DSA:1.10.60.10 103 162 7.1E-22 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 XFUD_04345 4233665bba8aff808841597d132658ae 164 SUPERFAMILY SSF47979 103 158 2.35E-12 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 XFUD_04345 4233665bba8aff808841597d132658ae 164 SUPERFAMILY SSF46785 45 102 3.09E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_04345 4233665bba8aff808841597d132658ae 164 Gene3D G3DSA:1.10.10.10 32 102 9.5E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_04120 41787fa2d99d9b4a37467f81f5c643b6 186 Pfam PF13740 ACT domain 14 87 1.7E-15 T 11-10-2018 XFUD_04120 41787fa2d99d9b4a37467f81f5c643b6 186 PIRSF PIRSF028103 11 186 3.8E-73 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 XFUD_04120 41787fa2d99d9b4a37467f81f5c643b6 186 Gene3D G3DSA:3.30.70.260 96 182 1.2E-15 T 11-10-2018 XFUD_04120 41787fa2d99d9b4a37467f81f5c643b6 186 SUPERFAMILY SSF55021 11 92 1.87E-8 T 11-10-2018 XFUD_04120 41787fa2d99d9b4a37467f81f5c643b6 186 Gene3D G3DSA:3.30.70.260 28 94 3.5E-8 T 11-10-2018 XFUD_04120 41787fa2d99d9b4a37467f81f5c643b6 186 SUPERFAMILY SSF55021 97 185 4.93E-18 T 11-10-2018 XFUD_03380 22a7535612f184b803bb72d0926ddb41 468 SUPERFAMILY SSF53623 103 314 7.46E-51 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFUD_03380 22a7535612f184b803bb72d0926ddb41 468 Gene3D G3DSA:3.90.190.20 319 461 4.3E-33 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFUD_03380 22a7535612f184b803bb72d0926ddb41 468 SUPERFAMILY SSF53244 320 457 9.39E-30 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFUD_03380 22a7535612f184b803bb72d0926ddb41 468 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 458 30.586 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_03380 22a7535612f184b803bb72d0926ddb41 468 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 457 2.0E-135 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_03380 22a7535612f184b803bb72d0926ddb41 468 Pfam PF08245 Mur ligase middle domain 107 300 2.2E-41 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XFUD_03380 22a7535612f184b803bb72d0926ddb41 468 SUPERFAMILY SSF63418 3 95 1.27E-20 T 11-10-2018 IPR035911 MurE/MurF, N-terminal XFUD_03380 22a7535612f184b803bb72d0926ddb41 468 Pfam PF02875 Mur ligase family, glutamate ligase domain 331 398 9.7E-9 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XFUD_03380 22a7535612f184b803bb72d0926ddb41 468 Pfam PF01225 Mur ligase family, catalytic domain 24 94 6.3E-5 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XFUD_03380 22a7535612f184b803bb72d0926ddb41 468 Gene3D G3DSA:3.40.1390.10 1 81 3.0E-21 T 11-10-2018 XFUD_03380 22a7535612f184b803bb72d0926ddb41 468 Gene3D G3DSA:3.40.1190.10 82 316 8.8E-66 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFUD_01710 275e0264c71cf4e16e67ab7be69ee806 480 PIRSF PIRSF006060 15 478 2.8E-81 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XFUD_01710 275e0264c71cf4e16e67ab7be69ee806 480 Gene3D G3DSA:1.20.1740.10 27 477 9.8E-109 T 11-10-2018 XFUD_01710 275e0264c71cf4e16e67ab7be69ee806 480 Pfam PF13520 Amino acid permease 29 439 5.2E-52 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XFUD_00670 272e8dd45284694c09b27c3828be6ec5 598 SUPERFAMILY SSF52540 44 573 2.47E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00670 272e8dd45284694c09b27c3828be6ec5 598 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 456 596 1.0E-33 T 11-10-2018 IPR018760 Protein of unknown function DUF2326 XFUD_00670 272e8dd45284694c09b27c3828be6ec5 598 Gene3D G3DSA:3.40.50.300 4 309 1.1E-5 T 11-10-2018 XFUD_00670 272e8dd45284694c09b27c3828be6ec5 598 Gene3D G3DSA:3.40.50.300 310 567 2.5E-7 T 11-10-2018 XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 Pfam PF03129 Anticodon binding domain 471 561 2.5E-12 T 11-10-2018 IPR004154 Anticodon-binding XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 SUPERFAMILY SSF52954 460 562 3.44E-23 T 11-10-2018 XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 Gene3D G3DSA:3.30.930.10 11 461 7.8E-223 T 11-10-2018 XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 563 38.938 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 559 1.0E-209 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 Pfam PF04073 Aminoacyl-tRNA editing domain 256 375 1.3E-24 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 SUPERFAMILY SSF55826 218 386 3.79E-29 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 Gene3D G3DSA:3.40.50.800 4 548 7.8E-223 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 Gene3D G3DSA:3.90.960.10 240 386 7.8E-223 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.9E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.9E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.9E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.9E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 SUPERFAMILY SSF55681 10 474 8.41E-102 T 11-10-2018 XFUD_01850 5526a08153606fd9c18f456e77a9a195 564 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 2.0E-45 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_04515 5efeaab8c99df201d3b82f455b22b172 630 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 3 603 55.524 T 11-10-2018 XFUD_04515 5efeaab8c99df201d3b82f455b22b172 630 Gene3D G3DSA:3.50.30.80 421 570 3.9E-46 T 11-10-2018 XFUD_04515 5efeaab8c99df201d3b82f455b22b172 630 SUPERFAMILY SSF143975 4 420 6.67E-136 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFUD_04515 5efeaab8c99df201d3b82f455b22b172 630 Pfam PF00920 Dehydratase family 68 598 3.9E-149 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFUD_04515 5efeaab8c99df201d3b82f455b22b172 630 SUPERFAMILY SSF52016 421 600 2.59E-50 T 11-10-2018 XFUD_04515 5efeaab8c99df201d3b82f455b22b172 630 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFUD_04515 5efeaab8c99df201d3b82f455b22b172 630 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 602 2.0E-273 T 11-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 XFUD_04515 5efeaab8c99df201d3b82f455b22b172 630 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PIRSF PIRSF000350 1 476 1.1E-79 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 1.6E-35 T 11-10-2018 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 290 1.6E-35 T 11-10-2018 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 325 1.6E-35 T 11-10-2018 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.6E-35 T 11-10-2018 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 1.6E-35 T 11-10-2018 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 Gene3D G3DSA:3.30.390.30 356 478 3.8E-44 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.1E-72 T 11-10-2018 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 2.1E-72 T 11-10-2018 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 2.1E-72 T 11-10-2018 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 2.1E-72 T 11-10-2018 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 2.1E-72 T 11-10-2018 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 318 325 2.1E-72 T 11-10-2018 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 289 2.1E-72 T 11-10-2018 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 2.1E-72 T 11-10-2018 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 353 374 2.1E-72 T 11-10-2018 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 Gene3D G3DSA:3.50.50.60 163 288 1.4E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 475 7.9E-154 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 338 2.3E-65 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 Gene3D G3DSA:3.50.50.60 5 343 1.4E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 SUPERFAMILY SSF55424 355 475 3.26E-41 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 465 3.2E-36 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 XFUD_06540 e1ef52ba34f8cb8c74ac96640cce9c1f 478 SUPERFAMILY SSF51905 1 347 5.75E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_04855 c2357ab282ece9b61f6b4f8d4693cd4e 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 1.8E-28 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 XFUD_04855 c2357ab282ece9b61f6b4f8d4693cd4e 156 SUPERFAMILY SSF81573 62 121 1.31E-10 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily XFUD_04855 c2357ab282ece9b61f6b4f8d4693cd4e 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 2.3E-37 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 XFUD_04855 c2357ab282ece9b61f6b4f8d4693cd4e 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.602 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 XFUD_04855 c2357ab282ece9b61f6b4f8d4693cd4e 156 Gene3D G3DSA:1.20.5.620 62 122 9.0E-11 T 11-10-2018 XFUD_11365 e79bebf2dd390d735f9c0436dfd116a3 116 SUPERFAMILY SSF55248 21 113 4.05E-31 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 XFUD_11365 e79bebf2dd390d735f9c0436dfd116a3 116 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 19 112 22.85 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 XFUD_11365 e79bebf2dd390d735f9c0436dfd116a3 116 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 21 110 2.1E-25 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 XFUD_11365 e79bebf2dd390d735f9c0436dfd116a3 116 Gene3D G3DSA:3.30.1360.20 20 115 5.2E-30 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 XFUD_02480 600d49e1e178d1d3bf20007b563afade 326 Pfam PF02424 ApbE family 16 294 1.1E-76 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 XFUD_02480 600d49e1e178d1d3bf20007b563afade 326 PIRSF PIRSF006268 1 321 7.7E-78 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 XFUD_02480 600d49e1e178d1d3bf20007b563afade 326 Gene3D G3DSA:3.10.520.20 2 324 2.2E-98 T 11-10-2018 XFUD_02480 600d49e1e178d1d3bf20007b563afade 326 SUPERFAMILY SSF143631 10 320 5.49E-88 T 11-10-2018 IPR003374 ApbE-like superfamily XFUD_10000 2b2c494239390195bbdc360bf5e51ef2 444 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFUD_10000 2b2c494239390195bbdc360bf5e51ef2 444 SUPERFAMILY SSF53383 1 425 7.9E-128 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFUD_10000 2b2c494239390195bbdc360bf5e51ef2 444 Gene3D G3DSA:3.90.1150.10 9 419 3.5E-174 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFUD_10000 2b2c494239390195bbdc360bf5e51ef2 444 Pfam PF00202 Aminotransferase class-III 35 396 7.3E-76 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFUD_10000 2b2c494239390195bbdc360bf5e51ef2 444 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 427 101.854 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 XFUD_10000 2b2c494239390195bbdc360bf5e51ef2 444 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 9.8E-187 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 XFUD_10000 2b2c494239390195bbdc360bf5e51ef2 444 Gene3D G3DSA:3.40.640.10 71 319 3.5E-174 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFUD_05745 c1d394c60bc5b2655de4e4be9f7a8206 293 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 47 278 2.4E-60 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 XFUD_05745 c1d394c60bc5b2655de4e4be9f7a8206 293 Pfam PF02666 Phosphatidylserine decarboxylase 61 277 6.8E-50 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 XFUD_05745 c1d394c60bc5b2655de4e4be9f7a8206 293 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 8 280 43.38 T 11-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 XFUD_06085 042131f8415478c655e915884b451c95 243 Gene3D G3DSA:3.40.630.70 65 238 6.2E-58 T 11-10-2018 XFUD_06085 042131f8415478c655e915884b451c95 243 Gene3D G3DSA:2.30.210.20 8 64 9.3E-25 T 11-10-2018 XFUD_06085 042131f8415478c655e915884b451c95 243 SUPERFAMILY SSF55729 10 231 2.81E-85 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFUD_06085 042131f8415478c655e915884b451c95 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 222 2.0E-55 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 XFUD_06085 042131f8415478c655e915884b451c95 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 38 208 2.9E-67 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 XFUD_06085 042131f8415478c655e915884b451c95 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 89.513 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 340 405 5.7E-13 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 64 127 3.5E-16 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 Gene3D G3DSA:3.90.480.10 69 159 5.0E-25 T 11-10-2018 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 SUPERFAMILY SSF55124 335 412 5.72E-16 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 421 549 0.0016 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 PRINTS PR00397 Sirohaem Fe-binding site signature 421 439 2.1E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 PRINTS PR00397 Sirohaem Fe-binding site signature 469 487 2.1E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 Gene3D G3DSA:3.30.413.10 192 329 2.1E-39 T 11-10-2018 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 SUPERFAMILY SSF56014 136 333 5.89E-53 T 11-10-2018 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 469 485 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 SUPERFAMILY SSF55124 3 135 9.16E-30 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 7 550 1.5E-281 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 1 561 54.813 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 SUPERFAMILY SSF56014 421 551 1.05E-32 T 11-10-2018 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 Gene3D G3DSA:3.30.413.10 417 552 1.3E-35 T 11-10-2018 XFUD_06320 f83dcfb1bb9c4582a160a88a4eea4bb0 568 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 162 317 5.9E-43 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 XFUD_03525 ca4698b2fdde532be4545cc492b6550d 327 Gene3D G3DSA:3.40.190.10 167 267 4.1E-63 T 11-10-2018 XFUD_03525 ca4698b2fdde532be4545cc492b6550d 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 5.3E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_03525 ca4698b2fdde532be4545cc492b6550d 327 Gene3D G3DSA:3.40.190.10 92 301 4.1E-63 T 11-10-2018 XFUD_03525 ca4698b2fdde532be4545cc492b6550d 327 SUPERFAMILY SSF46785 1 88 1.5E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_03525 ca4698b2fdde532be4545cc492b6550d 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_03525 ca4698b2fdde532be4545cc492b6550d 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_03525 ca4698b2fdde532be4545cc492b6550d 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_03525 ca4698b2fdde532be4545cc492b6550d 327 Pfam PF03466 LysR substrate binding domain 89 292 5.8E-36 T 11-10-2018 IPR005119 LysR, substrate-binding XFUD_03525 ca4698b2fdde532be4545cc492b6550d 327 SUPERFAMILY SSF53850 91 297 2.64E-34 T 11-10-2018 XFUD_03525 ca4698b2fdde532be4545cc492b6550d 327 Gene3D G3DSA:1.10.10.10 1 86 4.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_11295 452c7a8b1d40ec437403eb07fa7b3b31 250 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 249 109.403 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 XFUD_11295 452c7a8b1d40ec437403eb07fa7b3b31 250 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 212 3.1E-8 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 XFUD_11295 452c7a8b1d40ec437403eb07fa7b3b31 250 SUPERFAMILY SSF56300 1 240 1.57E-30 T 11-10-2018 XFUD_11295 452c7a8b1d40ec437403eb07fa7b3b31 250 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 240 6.2E-95 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 XFUD_11295 452c7a8b1d40ec437403eb07fa7b3b31 250 Gene3D G3DSA:3.60.21.10 1 241 4.5E-14 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 Hamap MF_01498 DNA repair protein RadA [radA]. 26 463 42.711 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 SMART SM00382 99 252 8.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 330 353 3.3E-91 T 11-10-2018 XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 132 149 3.3E-91 T 11-10-2018 XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 182 206 3.3E-91 T 11-10-2018 XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 221 249 3.3E-91 T 11-10-2018 XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 15 39 3.3E-91 T 11-10-2018 XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 91 119 3.3E-91 T 11-10-2018 XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 PRINTS PR01874 DNA repair protein radA signature 256 282 3.3E-91 T 11-10-2018 XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 SUPERFAMILY SSF52540 77 299 3.04E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 TIGRFAM TIGR00416 sms: DNA repair protein RadA 7 459 8.9E-186 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 Pfam PF13481 AAA domain 92 230 6.1E-12 T 11-10-2018 XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 Gene3D G3DSA:3.40.50.300 70 294 9.8E-40 T 11-10-2018 XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 SUPERFAMILY SSF54211 263 461 4.17E-39 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 Gene3D G3DSA:3.30.230.10 305 463 1.1E-16 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFUD_05795 d69d321618fbca747471e71e9d91f4d0 463 Pfam PF13541 Subunit ChlI of Mg-chelatase 359 438 1.5E-8 T 11-10-2018 XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 Gene3D G3DSA:1.10.10.60 410 470 2.5E-16 T 11-10-2018 XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 SMART SM00448 5 116 4.1E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 SUPERFAMILY SSF46689 355 469 6.27E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 SMART SM00382 161 304 8.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 Pfam PF02954 Bacterial regulatory protein, Fis family 427 467 2.6E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 SUPERFAMILY SSF52540 142 382 5.19E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 Gene3D G3DSA:1.10.8.60 312 388 2.9E-21 T 11-10-2018 XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 Pfam PF00072 Response regulator receiver domain 8 116 4.2E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 Pfam PF00158 Sigma-54 interaction domain 142 307 1.2E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 Gene3D G3DSA:3.40.50.2300 1 132 1.2E-32 T 11-10-2018 XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 SUPERFAMILY SSF52172 4 185 1.57E-41 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 Gene3D G3DSA:3.40.50.300 133 311 1.1E-60 T 11-10-2018 XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 2.3E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFUD_11105 fdef3f59ba7aa62b53306d8d57ce43ea 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 2.3E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFUD_05005 907e6f5db7b541eb49322386390837f3 377 Gene3D G3DSA:3.40.50.1820 61 377 3.4E-83 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_05005 907e6f5db7b541eb49322386390837f3 377 Pfam PF00561 alpha/beta hydrolase fold 70 202 2.6E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFUD_05005 907e6f5db7b541eb49322386390837f3 377 SUPERFAMILY SSF53474 66 373 1.32E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 ProSitePatterns PS01244 Aconitase family signature 2. 501 514 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 Gene3D G3DSA:1.10.1440.20 600 660 1.2E-21 T 11-10-2018 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 ProSitePatterns PS00450 Aconitase family signature 1. 435 451 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 Pfam PF00694 Aconitase C-terminal domain 700 830 1.3E-43 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 Gene3D G3DSA:3.20.19.10 661 903 3.7E-100 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 277 290 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 168 176 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 291 304 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 144 157 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 439 450 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 215 230 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 371 385 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 201 214 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 PRINTS PR00415 Aconitase family signature 501 514 7.6E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 17 902 0.0 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 Pfam PF00330 Aconitase family (aconitate hydratase) 67 570 6.4E-178 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 SUPERFAMILY SSF52016 639 901 4.91E-85 T 11-10-2018 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 Gene3D G3DSA:3.30.499.10 372 598 8.3E-99 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 SUPERFAMILY SSF53732 3 633 2.22E-222 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 XFUD_01225 e7c3c96ffbecccce8e510feeb1bc215c 908 Gene3D G3DSA:3.30.499.20 4 371 3.7E-158 T 11-10-2018 XFUD_01930 c50aad42cf17c53252c7278e72b6f976 411 SMART SM00564 131 163 7.2E-6 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFUD_01930 c50aad42cf17c53252c7278e72b6f976 411 SMART SM00564 268 299 0.66 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFUD_01930 c50aad42cf17c53252c7278e72b6f976 411 SMART SM00564 216 248 0.54 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFUD_01930 c50aad42cf17c53252c7278e72b6f976 411 SMART SM00564 305 337 52.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFUD_01930 c50aad42cf17c53252c7278e72b6f976 411 SMART SM00564 172 203 2.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFUD_01930 c50aad42cf17c53252c7278e72b6f976 411 SMART SM00564 76 107 0.0039 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat XFUD_01930 c50aad42cf17c53252c7278e72b6f976 411 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 10 408 3.9E-118 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB XFUD_01930 c50aad42cf17c53252c7278e72b6f976 411 SUPERFAMILY SSF50998 42 399 1.2E-75 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XFUD_01930 c50aad42cf17c53252c7278e72b6f976 411 Gene3D G3DSA:2.130.10.10 34 410 2.3E-92 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 XFUD_01930 c50aad42cf17c53252c7278e72b6f976 411 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 5 409 36.162 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB XFUD_01930 c50aad42cf17c53252c7278e72b6f976 411 Pfam PF13360 PQQ-like domain 127 336 1.1E-42 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat XFUD_01930 c50aad42cf17c53252c7278e72b6f976 411 Pfam PF01011 PQQ enzyme repeat 81 107 2.1E-4 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat XFUD_09275 34291de4f619b7247a1def320012bf28 788 SUPERFAMILY SSF56935 34 788 1.65E-96 T 11-10-2018 XFUD_09275 34291de4f619b7247a1def320012bf28 788 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 169 1.1E-23 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFUD_09275 34291de4f619b7247a1def320012bf28 788 Gene3D G3DSA:2.170.130.10 29 173 1.2E-35 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFUD_09275 34291de4f619b7247a1def320012bf28 788 Gene3D G3DSA:2.40.170.20 177 762 2.5E-53 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XFUD_09275 34291de4f619b7247a1def320012bf28 788 Pfam PF00593 TonB dependent receptor 280 770 1.5E-44 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFUD_09275 34291de4f619b7247a1def320012bf28 788 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 11-10-2018 IPR010916 TonB box, conserved site XFUD_05830 4422892d0e42064d0b3b624b2f171293 980 Gene3D G3DSA:3.90.1150.10 769 908 1.3E-39 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFUD_05830 4422892d0e42064d0b3b624b2f171293 980 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 11 961 25.414 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XFUD_05830 4422892d0e42064d0b3b624b2f171293 980 Pfam PF02347 Glycine cleavage system P-protein 445 800 2.6E-11 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XFUD_05830 4422892d0e42064d0b3b624b2f171293 980 Pfam PF02347 Glycine cleavage system P-protein 19 440 1.2E-174 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XFUD_05830 4422892d0e42064d0b3b624b2f171293 980 SUPERFAMILY SSF53383 20 436 3.71E-100 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFUD_05830 4422892d0e42064d0b3b624b2f171293 980 Gene3D G3DSA:3.40.640.10 519 744 6.0E-59 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFUD_05830 4422892d0e42064d0b3b624b2f171293 980 Gene3D G3DSA:3.40.640.10 98 356 3.1E-107 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFUD_05830 4422892d0e42064d0b3b624b2f171293 980 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 20 955 0.0 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 XFUD_05830 4422892d0e42064d0b3b624b2f171293 980 SUPERFAMILY SSF53383 470 956 3.88E-97 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.1E-21 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 SMART SM00490 460 546 3.1E-20 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 Gene3D G3DSA:3.40.50.300 1 238 6.6E-70 T 11-10-2018 XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 Pfam PF02151 UvrB/uvrC motif 635 665 1.3E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 SUPERFAMILY SSF52540 36 583 8.43E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 42.296 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 SUPERFAMILY SSF46600 620 665 5.1E-12 T 11-10-2018 IPR036876 UVR domain superfamily XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 Gene3D G3DSA:3.40.50.300 269 414 2.8E-49 T 11-10-2018 XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 SMART SM00487 9 426 1.3E-25 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 Gene3D G3DSA:3.40.50.300 415 596 6.5E-50 T 11-10-2018 XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 Gene3D G3DSA:4.10.860.10 613 668 5.0E-15 T 11-10-2018 XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 Pfam PF04851 Type III restriction enzyme, res subunit 16 92 1.1E-8 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 Pfam PF00271 Helicase conserved C-terminal domain 444 544 1.6E-18 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_04140 ba902319fa13b9455684b1fab62e6a55 669 SUPERFAMILY SSF52540 4 415 5.27E-127 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 SUPERFAMILY SSF51120 773 930 9.42E-28 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 975 993 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 SUPERFAMILY SSF51120 1098 1254 5.49E-29 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1155 1173 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 831 849 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 658 676 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 SUPERFAMILY SSF51120 601 767 1.44E-27 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 SUPERFAMILY SSF51120 936 1092 1.16E-29 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 984 1002 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 649 667 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1137 1155 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 667 685 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 813 831 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF06594 Haemolysin-type calcium binding protein related domain 894 932 4.2E-13 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF06594 Haemolysin-type calcium binding protein related domain 730 770 1.1E-11 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1218 1257 6.0E-12 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1056 1094 4.2E-13 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 835 850 0.012 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 671 686 0.008 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 798 814 1.7 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 978 995 0.002 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1141 1157 0.05 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 997 1012 0.012 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1122 1138 1.1 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 625 641 3.9 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 960 976 0.27 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 653 669 0.018 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1159 1174 0.012 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 817 833 0.01 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 993 1011 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 PRINTS PR00313 NodO calcium binding signature 997 1005 1.7E-12 T 11-10-2018 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 PRINTS PR00313 NodO calcium binding signature 979 987 1.7E-12 T 11-10-2018 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 PRINTS PR00313 NodO calcium binding signature 832 843 1.7E-12 T 11-10-2018 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 PRINTS PR00313 NodO calcium binding signature 1006 1015 1.7E-12 T 11-10-2018 XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1146 1164 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 822 840 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Gene3D G3DSA:2.150.10.10 946 1108 1.7E-36 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Gene3D G3DSA:2.150.10.10 625 785 1.3E-33 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Gene3D G3DSA:2.150.10.10 791 945 3.1E-36 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_11980 9aba11f80f5361bae335ab8e814bd799 1296 Gene3D G3DSA:2.150.10.10 1115 1272 1.1E-44 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_01360 3ef8fce655ff5585838864138de9b12c 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 137 8.1E-44 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01360 3ef8fce655ff5585838864138de9b12c 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 5.7E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XFUD_01360 3ef8fce655ff5585838864138de9b12c 162 SUPERFAMILY SSF54862 36 144 7.95E-25 T 11-10-2018 XFUD_01360 3ef8fce655ff5585838864138de9b12c 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XFUD_01360 3ef8fce655ff5585838864138de9b12c 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XFUD_01360 3ef8fce655ff5585838864138de9b12c 162 Gene3D G3DSA:3.30.70.3270 36 161 6.3E-35 T 11-10-2018 XFUD_01360 3ef8fce655ff5585838864138de9b12c 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 26.648 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_07245 e06900f0dbe08becc8ae8d67f3ac8407 75 SUPERFAMILY SSF47598 2 42 2.89E-8 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XFUD_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 101 1.9E-41 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFUD_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 Gene3D G3DSA:3.30.300.10 11 272 2.3E-167 T 11-10-2018 XFUD_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 SUPERFAMILY SSF55973 235 400 2.47E-65 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFUD_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 SUPERFAMILY SSF55973 110 234 5.49E-46 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFUD_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 400 55.602 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFUD_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFUD_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFUD_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 367 5.4E-178 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFUD_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 PIRSF PIRSF000497 1 401 1.2E-166 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFUD_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 Gene3D G3DSA:3.30.300.10 102 391 2.3E-167 T 11-10-2018 XFUD_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 366 7.2E-66 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFUD_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 233 1.1E-41 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFUD_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 SUPERFAMILY SSF55973 3 109 7.46E-46 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 XFUD_01645 b8b2d0ee62de2f7bda27b383b2c19b60 403 Gene3D G3DSA:3.30.300.10 5 235 2.3E-167 T 11-10-2018 XFUD_06410 f8a03031672c7aee727a6108c8254391 566 Pfam PF00437 Type II/IV secretion system protein 191 455 1.2E-84 T 11-10-2018 IPR001482 Type II/IV secretion system protein XFUD_06410 f8a03031672c7aee727a6108c8254391 566 Gene3D G3DSA:3.30.450.90 158 288 1.4E-49 T 11-10-2018 XFUD_06410 f8a03031672c7aee727a6108c8254391 566 SUPERFAMILY SSF160246 3 148 4.71E-30 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily XFUD_06410 f8a03031672c7aee727a6108c8254391 566 Gene3D G3DSA:1.10.40.70 2 62 2.3E-26 T 11-10-2018 XFUD_06410 f8a03031672c7aee727a6108c8254391 566 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 11-10-2018 IPR001482 Type II/IV secretion system protein XFUD_06410 f8a03031672c7aee727a6108c8254391 566 SUPERFAMILY SSF52540 173 563 2.24E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_06410 f8a03031672c7aee727a6108c8254391 566 Gene3D G3DSA:3.30.300.160 63 148 7.1E-30 T 11-10-2018 XFUD_06410 f8a03031672c7aee727a6108c8254391 566 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 83 563 2.4E-216 T 11-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 XFUD_06410 f8a03031672c7aee727a6108c8254391 566 SMART SM00382 316 437 1.9E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_06410 f8a03031672c7aee727a6108c8254391 566 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 44 151 1.8E-14 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal XFUD_06410 f8a03031672c7aee727a6108c8254391 566 Gene3D G3DSA:3.40.50.300 291 565 1.3E-102 T 11-10-2018 XFUD_04030 f8d52906975a73a34bfa3acecf8e9d31 327 Gene3D G3DSA:3.10.290.10 8 73 9.3E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XFUD_04030 f8d52906975a73a34bfa3acecf8e9d31 327 Pfam PF01479 S4 domain 21 67 1.7E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04030 f8d52906975a73a34bfa3acecf8e9d31 327 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_04030 f8d52906975a73a34bfa3acecf8e9d31 327 SUPERFAMILY SSF55120 79 316 5.76E-76 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_04030 f8d52906975a73a34bfa3acecf8e9d31 327 SMART SM00363 21 85 0.0014 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04030 f8d52906975a73a34bfa3acecf8e9d31 327 Gene3D G3DSA:3.30.2350.10 87 318 1.7E-70 T 11-10-2018 XFUD_04030 f8d52906975a73a34bfa3acecf8e9d31 327 Pfam PF00849 RNA pseudouridylate synthase 94 244 6.3E-33 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_04030 f8d52906975a73a34bfa3acecf8e9d31 327 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 315 3.7E-90 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_04030 f8d52906975a73a34bfa3acecf8e9d31 327 SUPERFAMILY SSF55174 20 107 1.63E-8 T 11-10-2018 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 SUPERFAMILY SSF56091 5 317 1.15E-113 T 11-10-2018 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 Gene3D G3DSA:1.10.287.610 5 70 3.7E-25 T 11-10-2018 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 753 823 2.6E-10 T 11-10-2018 IPR001357 BRCT domain XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 SUPERFAMILY SSF47781 662 734 4.77E-8 T 11-10-2018 IPR010994 RuvA domain 2-like XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 397 3.8E-33 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 Hamap MF_01588 DNA ligase [ligA]. 4 825 49.644 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 Gene3D G3DSA:2.20.70.80 392 432 3.4E-14 T 11-10-2018 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 SMART SM00292 751 828 2.4E-10 T 11-10-2018 IPR001357 BRCT domain XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 Pfam PF12826 Helix-hairpin-helix motif 576 639 1.7E-13 T 11-10-2018 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 Gene3D G3DSA:1.10.150.20 433 500 5.1E-19 T 11-10-2018 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 498 9.9E-188 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 SUPERFAMILY SSF50249 319 398 3.08E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 435 1.3E-9 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 Gene3D G3DSA:1.10.150.20 572 652 5.4E-20 T 11-10-2018 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 Gene3D G3DSA:3.40.50.10190 741 827 1.2E-22 T 11-10-2018 IPR036420 BRCT domain superfamily XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 SMART SM00532 5 449 2.1E-247 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 Gene3D G3DSA:2.40.50.140 319 391 4.3E-32 T 11-10-2018 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 SUPERFAMILY SSF52113 752 826 1.38E-14 T 11-10-2018 IPR036420 BRCT domain superfamily XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 PIRSF PIRSF001604 2 667 4.3E-197 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 PIRSF PIRSF001604 659 829 1.6E-25 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 8 319 8.9E-120 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 SUPERFAMILY SSF47781 405 650 2.45E-48 T 11-10-2018 IPR010994 RuvA domain 2-like XFUD_11165 a41d4b3ba627616a9395fd7d739f1a39 831 Gene3D G3DSA:3.30.470.90 71 318 1.2E-92 T 11-10-2018 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 Pfam PF00204 DNA gyrase B 218 384 3.4E-38 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 627 46.196 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 SMART SM00433 34 623 2.6E-201 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 Gene3D G3DSA:3.30.565.10 3 215 1.1E-73 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 413 427 1.6E-57 T 11-10-2018 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 516 528 1.6E-57 T 11-10-2018 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.6E-57 T 11-10-2018 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.6E-57 T 11-10-2018 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 265 278 1.6E-57 T 11-10-2018 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 496 513 1.6E-57 T 11-10-2018 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.6E-57 T 11-10-2018 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 478 494 1.6E-57 T 11-10-2018 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR00418 DNA topoisomerase II family signature 561 577 1.6E-57 T 11-10-2018 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 SUPERFAMILY SSF54211 217 380 4.55E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 SMART SM00387 27 173 2.0E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 Pfam PF01751 Toprim domain 412 510 5.2E-12 T 11-10-2018 IPR006171 TOPRIM domain XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 619 4.9E-23 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 Gene3D G3DSA:3.40.50.670 389 622 5.1E-85 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 SUPERFAMILY SSF56719 387 620 9.42E-74 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 Gene3D G3DSA:3.30.230.10 218 388 9.8E-56 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 4.6E-95 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 SUPERFAMILY SSF55874 4 215 3.8E-65 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 4 623 3.3E-285 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05420 4bfeb83773cc2ef20821a95f0bf7512c 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 2.2E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_05605 932e77e0c68eaf2ae35f6eb7ed85150e 234 Pfam PF04264 YceI-like domain 26 189 3.4E-33 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XFUD_05605 932e77e0c68eaf2ae35f6eb7ed85150e 234 SUPERFAMILY SSF101874 24 192 8.63E-44 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XFUD_05605 932e77e0c68eaf2ae35f6eb7ed85150e 234 Gene3D G3DSA:2.40.128.110 24 193 7.6E-41 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XFUD_05605 932e77e0c68eaf2ae35f6eb7ed85150e 234 SMART SM00867 25 190 4.2E-48 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XFUD_01915 8b6d251cb77fc8b0cb548dfe3a0b1f45 269 Pfam PF13181 Tetratricopeptide repeat 91 122 0.015 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_01915 8b6d251cb77fc8b0cb548dfe3a0b1f45 269 SMART SM00028 56 89 350.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_01915 8b6d251cb77fc8b0cb548dfe3a0b1f45 269 SMART SM00028 90 123 2.7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_01915 8b6d251cb77fc8b0cb548dfe3a0b1f45 269 SMART SM00028 160 193 3.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_01915 8b6d251cb77fc8b0cb548dfe3a0b1f45 269 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 14 260 8.6E-49 T 11-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW XFUD_01915 8b6d251cb77fc8b0cb548dfe3a0b1f45 269 SUPERFAMILY SSF48452 60 221 1.14E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_01915 8b6d251cb77fc8b0cb548dfe3a0b1f45 269 Gene3D G3DSA:1.25.40.10 55 266 9.1E-39 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_08395 b589757f74a6132e96fb7e18824817b6 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 336 1.1E-153 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFUD_08395 b589757f74a6132e96fb7e18824817b6 666 Pfam PF02780 Transketolase, C-terminal domain 554 659 1.4E-13 T 11-10-2018 IPR033248 Transketolase, C-terminal domain XFUD_08395 b589757f74a6132e96fb7e18824817b6 666 SMART SM00861 357 528 5.0E-67 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XFUD_08395 b589757f74a6132e96fb7e18824817b6 666 SUPERFAMILY SSF52518 7 321 6.29E-118 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFUD_08395 b589757f74a6132e96fb7e18824817b6 666 Gene3D G3DSA:3.40.50.970 5 328 5.7E-130 T 11-10-2018 XFUD_08395 b589757f74a6132e96fb7e18824817b6 666 ProSitePatterns PS00802 Transketolase signature 2. 470 486 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFUD_08395 b589757f74a6132e96fb7e18824817b6 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 665 1.5E-287 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 XFUD_08395 b589757f74a6132e96fb7e18824817b6 666 Gene3D G3DSA:3.40.50.920 542 666 9.0E-41 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XFUD_08395 b589757f74a6132e96fb7e18824817b6 666 SUPERFAMILY SSF52518 343 528 9.03E-66 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFUD_08395 b589757f74a6132e96fb7e18824817b6 666 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFUD_08395 b589757f74a6132e96fb7e18824817b6 666 Pfam PF02779 Transketolase, pyrimidine binding domain 357 528 8.9E-45 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XFUD_08395 b589757f74a6132e96fb7e18824817b6 666 Gene3D G3DSA:3.40.50.970 329 540 1.5E-74 T 11-10-2018 XFUD_08395 b589757f74a6132e96fb7e18824817b6 666 SUPERFAMILY SSF52922 535 666 3.85E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XFUD_08030 cebf206dabbd01a193228cf72d4d45b4 505 Gene3D G3DSA:3.20.130.10 307 487 5.7E-60 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 XFUD_08030 cebf206dabbd01a193228cf72d4d45b4 505 Pfam PF05683 Fumarase C-terminus 289 488 1.5E-78 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 XFUD_08030 cebf206dabbd01a193228cf72d4d45b4 505 SUPERFAMILY SSF117457 317 486 6.67E-62 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 XFUD_08030 cebf206dabbd01a193228cf72d4d45b4 505 PIRSF PIRSF001394 1 505 3.9E-220 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 XFUD_08030 cebf206dabbd01a193228cf72d4d45b4 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 486 9.3E-49 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 XFUD_08030 cebf206dabbd01a193228cf72d4d45b4 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 2.2E-97 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 XFUD_08030 cebf206dabbd01a193228cf72d4d45b4 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 2.5E-60 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 XFUD_00200 fbf54f1fffdf625924353819064f8c03 161 Gene3D G3DSA:2.40.50.100 84 160 7.8E-30 T 11-10-2018 XFUD_00200 fbf54f1fffdf625924353819064f8c03 161 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 161 1.1E-49 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XFUD_00200 fbf54f1fffdf625924353819064f8c03 161 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 117 134 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XFUD_00200 fbf54f1fffdf625924353819064f8c03 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 107 121 9.5E-15 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XFUD_00200 fbf54f1fffdf625924353819064f8c03 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 122 135 9.5E-15 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XFUD_00200 fbf54f1fffdf625924353819064f8c03 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 90 103 9.5E-15 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 XFUD_00200 fbf54f1fffdf625924353819064f8c03 161 SUPERFAMILY SSF51230 86 160 4.32E-24 T 11-10-2018 IPR011053 Single hybrid motif XFUD_00200 fbf54f1fffdf625924353819064f8c03 161 Pfam PF00364 Biotin-requiring enzyme 87 160 8.3E-23 T 11-10-2018 IPR000089 Biotin/lipoyl attachment XFUD_11565 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Gene3D G3DSA:3.30.460.30 1 150 2.0E-50 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFUD_11565 586ba43ac5c55f14ef4b6cb6abc0fba1 432 PIRSF PIRSF000445 1 421 2.1E-146 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFUD_11565 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 410 29.037 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFUD_11565 586ba43ac5c55f14ef4b6cb6abc0fba1 432 SUPERFAMILY SSF69075 309 409 4.18E-24 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFUD_11565 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 313 407 1.3E-19 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFUD_11565 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Gene3D G3DSA:3.40.50.720 154 305 2.9E-41 T 11-10-2018 XFUD_11565 586ba43ac5c55f14ef4b6cb6abc0fba1 432 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 91 114 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFUD_11565 586ba43ac5c55f14ef4b6cb6abc0fba1 432 SUPERFAMILY SSF69742 1 150 1.44E-45 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFUD_11565 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 148 5.1E-46 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFUD_11565 586ba43ac5c55f14ef4b6cb6abc0fba1 432 SUPERFAMILY SSF51735 154 307 1.99E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_11565 586ba43ac5c55f14ef4b6cb6abc0fba1 432 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 164 297 2.8E-45 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase XFUD_11565 586ba43ac5c55f14ef4b6cb6abc0fba1 432 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 407 4.1E-121 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 XFUD_09005 54d38bcbebd224d3eb09b89319a520bf 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 73 3.6E-29 T 11-10-2018 IPR022789 Antitoxin ParD XFUD_09005 54d38bcbebd224d3eb09b89319a520bf 80 SUPERFAMILY SSF47598 5 45 2.33E-8 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XFUD_09005 54d38bcbebd224d3eb09b89319a520bf 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 78 1.6E-41 T 11-10-2018 IPR022789 Antitoxin ParD XFUD_09005 54d38bcbebd224d3eb09b89319a520bf 80 Gene3D G3DSA:1.10.8.1250 10 80 7.8E-24 T 11-10-2018 IPR038296 Antitoxin ParD superfamily XFUD_09665 43906af58d578280269c8f69d64f46cf 365 SUPERFAMILY SSF53383 27 360 5.83E-70 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFUD_09665 43906af58d578280269c8f69d64f46cf 365 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 361 54.011 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 XFUD_09665 43906af58d578280269c8f69d64f46cf 365 Gene3D G3DSA:3.40.640.10 55 264 2.6E-117 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFUD_09665 43906af58d578280269c8f69d64f46cf 365 Pfam PF00155 Aminotransferase class I and II 49 356 1.3E-50 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XFUD_09665 43906af58d578280269c8f69d64f46cf 365 Gene3D G3DSA:3.90.1150.10 11 353 2.6E-117 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFUD_09665 43906af58d578280269c8f69d64f46cf 365 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 13 360 2.6E-113 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 XFUD_02705 833110822f9e881d823eb6edeaad61b1 220 Gene3D G3DSA:1.20.1540.10 2 200 2.1E-33 T 11-10-2018 IPR035952 Rhomboid-like superfamily XFUD_02705 833110822f9e881d823eb6edeaad61b1 220 Pfam PF01694 Rhomboid family 52 201 1.4E-37 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 XFUD_02705 833110822f9e881d823eb6edeaad61b1 220 SUPERFAMILY SSF144091 4 201 5.89E-42 T 11-10-2018 XFUD_02705 833110822f9e881d823eb6edeaad61b1 220 SMART SM01160 49 138 0.0019 T 11-10-2018 XFUD_06415 9cb1c1b2e725c3ec4143f06f75daaa54 405 Gene3D G3DSA:1.20.81.30 260 366 1.0E-25 T 11-10-2018 XFUD_06415 9cb1c1b2e725c3ec4143f06f75daaa54 405 Gene3D G3DSA:1.20.81.30 58 173 1.5E-24 T 11-10-2018 XFUD_06415 9cb1c1b2e725c3ec4143f06f75daaa54 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 XFUD_06415 9cb1c1b2e725c3ec4143f06f75daaa54 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 9.7E-21 T 11-10-2018 IPR003004 GspF/PilC family XFUD_06415 9cb1c1b2e725c3ec4143f06f75daaa54 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 9.7E-21 T 11-10-2018 IPR003004 GspF/PilC family XFUD_06415 9cb1c1b2e725c3ec4143f06f75daaa54 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 9.7E-21 T 11-10-2018 IPR003004 GspF/PilC family XFUD_06415 9cb1c1b2e725c3ec4143f06f75daaa54 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 9.7E-21 T 11-10-2018 IPR003004 GspF/PilC family XFUD_06415 9cb1c1b2e725c3ec4143f06f75daaa54 405 Pfam PF00482 Type II secretion system (T2SS), protein F 275 396 1.1E-25 T 11-10-2018 IPR018076 Type II secretion system F domain XFUD_06415 9cb1c1b2e725c3ec4143f06f75daaa54 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.1E-29 T 11-10-2018 IPR018076 Type II secretion system F domain XFUD_09655 f4b475b3e236d7baf6925b9c8bfb61be 200 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 197 32.465 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 XFUD_09655 f4b475b3e236d7baf6925b9c8bfb61be 200 SUPERFAMILY SSF52317 4 197 2.85E-45 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_09655 f4b475b3e236d7baf6925b9c8bfb61be 200 PRINTS PR00097 Anthranilate synthase component II signature 73 84 6.3E-5 T 11-10-2018 XFUD_09655 f4b475b3e236d7baf6925b9c8bfb61be 200 PRINTS PR00097 Anthranilate synthase component II signature 42 51 6.3E-5 T 11-10-2018 XFUD_09655 f4b475b3e236d7baf6925b9c8bfb61be 200 PRINTS PR00097 Anthranilate synthase component II signature 175 188 6.3E-5 T 11-10-2018 XFUD_09655 f4b475b3e236d7baf6925b9c8bfb61be 200 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 197 1.0E-67 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 XFUD_09655 f4b475b3e236d7baf6925b9c8bfb61be 200 PIRSF PIRSF000495 2 200 2.0E-61 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 XFUD_09655 f4b475b3e236d7baf6925b9c8bfb61be 200 Pfam PF00117 Glutamine amidotransferase class-I 6 195 2.0E-17 T 11-10-2018 IPR017926 Glutamine amidotransferase XFUD_09655 f4b475b3e236d7baf6925b9c8bfb61be 200 Gene3D G3DSA:3.40.50.880 1 200 1.7E-61 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_07395 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.8E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07395 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.8E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07395 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.8E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07395 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.9E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07395 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.9E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07395 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.9E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07395 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.9E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07395 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.9E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07395 c222cc81ba6428fc8ab32d818fcf33b6 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.9E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07395 c222cc81ba6428fc8ab32d818fcf33b6 255 SUPERFAMILY SSF51735 5 254 7.9E-81 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_07395 c222cc81ba6428fc8ab32d818fcf33b6 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 2.6E-71 T 11-10-2018 XFUD_07395 c222cc81ba6428fc8ab32d818fcf33b6 255 Gene3D G3DSA:3.40.50.720 1 254 7.8E-85 T 11-10-2018 XFUD_11855 f89c3a526981d9bf2f688734a0335f01 525 SUPERFAMILY SSF53335 11 523 5.84E-121 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_11855 f89c3a526981d9bf2f688734a0335f01 525 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 342 366 1.3E-17 T 11-10-2018 XFUD_11855 f89c3a526981d9bf2f688734a0335f01 525 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 205 221 1.3E-17 T 11-10-2018 XFUD_11855 f89c3a526981d9bf2f688734a0335f01 525 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 231 245 1.3E-17 T 11-10-2018 XFUD_11855 f89c3a526981d9bf2f688734a0335f01 525 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 304 316 1.3E-17 T 11-10-2018 XFUD_11855 f89c3a526981d9bf2f688734a0335f01 525 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 511 4.6E-218 T 11-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 XFUD_11855 f89c3a526981d9bf2f688734a0335f01 525 Gene3D G3DSA:3.40.50.150 203 483 1.5E-75 T 11-10-2018 XFUD_11855 f89c3a526981d9bf2f688734a0335f01 525 Gene3D G3DSA:1.20.1260.30 2 199 1.3E-50 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily XFUD_11855 f89c3a526981d9bf2f688734a0335f01 525 Pfam PF12161 HsdM N-terminal domain 12 165 1.1E-19 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain XFUD_11855 f89c3a526981d9bf2f688734a0335f01 525 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 307 313 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XFUD_11855 f89c3a526981d9bf2f688734a0335f01 525 Pfam PF02384 N-6 DNA Methylase 181 489 1.1E-105 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 XFUD_12145 269d48511a0cb00282a8dac1612ab7ad 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_12145 269d48511a0cb00282a8dac1612ab7ad 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 46 8.2E-26 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_12145 269d48511a0cb00282a8dac1612ab7ad 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 16.576 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_12145 269d48511a0cb00282a8dac1612ab7ad 46 Pfam PF00468 Ribosomal protein L34 3 46 7.8E-26 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_12145 269d48511a0cb00282a8dac1612ab7ad 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 28 7.0E-8 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04160 690c80adf49c57ef7f417eb9d9c8481e 210 Gene3D G3DSA:3.40.50.12740 5 206 1.1E-48 T 11-10-2018 XFUD_04160 690c80adf49c57ef7f417eb9d9c8481e 210 SMART SM00448 4 118 2.4E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_04160 690c80adf49c57ef7f417eb9d9c8481e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFUD_04160 690c80adf49c57ef7f417eb9d9c8481e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFUD_04160 690c80adf49c57ef7f417eb9d9c8481e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFUD_04160 690c80adf49c57ef7f417eb9d9c8481e 210 SUPERFAMILY SSF52172 1 130 5.41E-26 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_04160 690c80adf49c57ef7f417eb9d9c8481e 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFUD_04160 690c80adf49c57ef7f417eb9d9c8481e 210 SUPERFAMILY SSF46894 129 204 4.76E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XFUD_04160 690c80adf49c57ef7f417eb9d9c8481e 210 Pfam PF00072 Response regulator receiver domain 6 118 4.6E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_04160 690c80adf49c57ef7f417eb9d9c8481e 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 2.3E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFUD_04160 690c80adf49c57ef7f417eb9d9c8481e 210 SMART SM00421 146 203 3.7E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFUD_09875 eefe6a22330996ac42812070060fd4e3 288 SUPERFAMILY SSF74650 7 283 4.9E-61 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 XFUD_09875 eefe6a22330996ac42812070060fd4e3 288 Pfam PF01263 Aldose 1-epimerase 20 283 2.7E-44 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 XFUD_09875 eefe6a22330996ac42812070060fd4e3 288 Gene3D G3DSA:2.70.98.10 4 287 6.9E-67 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 XFUD_09875 eefe6a22330996ac42812070060fd4e3 288 PIRSF PIRSF016020 15 287 3.8E-36 T 11-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 XFUD_03150 ed7166dce18f2319209eea5dc6c01e0e 99 SMART SM00411 3 92 1.3E-40 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_03150 ed7166dce18f2319209eea5dc6c01e0e 99 SUPERFAMILY SSF47729 3 92 1.44E-31 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFUD_03150 ed7166dce18f2319209eea5dc6c01e0e 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 29.342 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 XFUD_03150 ed7166dce18f2319209eea5dc6c01e0e 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.1E-15 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_03150 ed7166dce18f2319209eea5dc6c01e0e 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.1E-15 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_03150 ed7166dce18f2319209eea5dc6c01e0e 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.1E-15 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_03150 ed7166dce18f2319209eea5dc6c01e0e 99 Gene3D G3DSA:4.10.520.10 1 96 2.1E-35 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFUD_03150 ed7166dce18f2319209eea5dc6c01e0e 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.8E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_03150 ed7166dce18f2319209eea5dc6c01e0e 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 6.8E-45 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 XFUD_03150 ed7166dce18f2319209eea5dc6c01e0e 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 XFUD_08460 e4a1e4da1012555d294b083318b67b82 399 SUPERFAMILY SSF52738 220 375 6.8E-21 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal XFUD_08460 e4a1e4da1012555d294b083318b67b82 399 Pfam PF01339 CheB methylesterase 225 365 2.0E-10 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 XFUD_08460 e4a1e4da1012555d294b083318b67b82 399 Gene3D G3DSA:3.40.50.180 222 363 3.4E-10 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal XFUD_08460 e4a1e4da1012555d294b083318b67b82 399 PIRSF PIRSF036592 8 397 2.7E-216 T 11-10-2018 IPR012071 Chemotaxis glutamate methyltransferase XFUD_12375 944ec07a16be83dcff08a356e846cbf9 238 SUPERFAMILY SSF54427 103 237 5.7E-15 T 11-10-2018 IPR032710 NTF2-like domain superfamily XFUD_12375 944ec07a16be83dcff08a356e846cbf9 238 Gene3D G3DSA:3.10.450.230 132 238 3.4E-6 T 11-10-2018 XFUD_12375 944ec07a16be83dcff08a356e846cbf9 238 Pfam PF04335 VirB8 protein 26 237 2.5E-46 T 11-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 XFUD_11265 dd6b534845a04bc81c399614000375fe 292 Gene3D G3DSA:3.30.479.20 56 147 3.4E-25 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XFUD_11265 dd6b534845a04bc81c399614000375fe 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 289 3.4E-98 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFUD_11265 dd6b534845a04bc81c399614000375fe 292 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFUD_11265 dd6b534845a04bc81c399614000375fe 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 72.924 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFUD_11265 dd6b534845a04bc81c399614000375fe 292 SUPERFAMILY SSF46934 1 55 4.38E-19 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 XFUD_11265 dd6b534845a04bc81c399614000375fe 292 Pfam PF00889 Elongation factor TS 70 272 2.2E-64 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 XFUD_11265 dd6b534845a04bc81c399614000375fe 292 SUPERFAMILY SSF54713 55 144 2.18E-20 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XFUD_11265 dd6b534845a04bc81c399614000375fe 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFUD_11265 dd6b534845a04bc81c399614000375fe 292 Gene3D G3DSA:1.10.8.10 1 55 1.6E-26 T 11-10-2018 XFUD_11265 dd6b534845a04bc81c399614000375fe 292 Gene3D G3DSA:3.30.479.20 153 271 4.0E-39 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XFUD_11265 dd6b534845a04bc81c399614000375fe 292 SUPERFAMILY SSF54713 149 289 5.89E-46 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 XFUD_11265 dd6b534845a04bc81c399614000375fe 292 Gene3D G3DSA:1.10.286.20 189 237 4.0E-39 T 11-10-2018 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:3.30.70.1440 658 857 1.2E-230 T 11-10-2018 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:3.30.70.1430 558 657 1.2E-230 T 11-10-2018 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 SUPERFAMILY SSF82714 710 795 5.36E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 SUPERFAMILY SSF82866 298 493 3.53E-35 T 11-10-2018 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 4.9E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 4.9E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 4.9E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 4.9E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 4.9E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:1.20.1640.10 507 1009 1.2E-230 T 11-10-2018 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 SUPERFAMILY SSF82693 144 328 1.31E-15 T 11-10-2018 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 SUPERFAMILY SSF82693 557 606 7.85E-5 T 11-10-2018 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 SUPERFAMILY SSF82714 190 271 7.72E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 SUPERFAMILY SSF82693 45 138 5.06E-14 T 11-10-2018 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:3.30.2090.10 709 797 1.2E-230 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:1.20.1640.10 18 506 1.2E-230 T 11-10-2018 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 SUPERFAMILY SSF82866 793 1016 6.41E-41 T 11-10-2018 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 Pfam PF00873 AcrB/AcrD/AcrF family 9 1010 7.2E-149 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:3.30.2090.10 184 273 1.2E-230 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:3.30.70.1430 45 805 1.2E-230 T 11-10-2018 XFUD_09055 8c4894665d84f3d3cb885e34f4cd3f76 1020 Gene3D G3DSA:3.30.70.1320 142 331 1.2E-230 T 11-10-2018 XFUD_00575 936b09d7f70a858c6d910218b08090c0 368 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 8 366 1.9E-105 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 XFUD_00575 936b09d7f70a858c6d910218b08090c0 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 365 2.3E-68 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 45 326 4.9E-49 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 SMART SM01217 792 860 1.2E-23 T 11-10-2018 IPR026891 Fibronectin type III-like domain XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 Gene3D G3DSA:3.20.20.300 29 346 5.1E-96 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 SMART SM00758 452 606 1.2E-36 T 11-10-2018 IPR011658 PA14 domain XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 SUPERFAMILY SSF52279 369 758 1.02E-51 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 Gene3D G3DSA:3.40.50.1700 354 452 5.9E-17 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 Gene3D G3DSA:2.60.40.10 758 865 1.8E-29 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 PRINTS PR00133 Glycosyl hydrolase family 3 signature 180 196 2.2E-11 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 PRINTS PR00133 Glycosyl hydrolase family 3 signature 84 103 2.2E-11 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 PRINTS PR00133 Glycosyl hydrolase family 3 signature 251 269 2.2E-11 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 Pfam PF07691 PA14 domain 452 605 3.8E-45 T 11-10-2018 IPR011658 PA14 domain XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 Gene3D G3DSA:3.40.50.1700 537 757 4.4E-57 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 369 755 1.4E-60 T 11-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 SUPERFAMILY SSF51445 27 368 2.32E-95 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 SUPERFAMILY SSF56988 455 633 1.83E-24 T 11-10-2018 XFUD_03575 358acdb075bb7a38e3d97dd124092e32 882 Pfam PF14310 Fibronectin type III-like domain 792 858 4.8E-19 T 11-10-2018 IPR026891 Fibronectin type III-like domain XFUD_10130 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 Gene3D G3DSA:3.40.430.10 1 166 4.7E-49 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XFUD_10130 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 11-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 XFUD_10130 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 PRINTS PR00070 Dihydrofolate reductase signature 14 24 2.1E-11 T 11-10-2018 XFUD_10130 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 PRINTS PR00070 Dihydrofolate reductase signature 41 52 2.1E-11 T 11-10-2018 XFUD_10130 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 PRINTS PR00070 Dihydrofolate reductase signature 28 36 2.1E-11 T 11-10-2018 XFUD_10130 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 PRINTS PR00070 Dihydrofolate reductase signature 94 108 2.1E-11 T 11-10-2018 XFUD_10130 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 Pfam PF00186 Dihydrofolate reductase 3 163 3.5E-50 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 XFUD_10130 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 PIRSF PIRSF000194 1 166 1.6E-52 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 XFUD_10130 6fbb097f9bbf02a8b9f276d80cb7dc4d 166 SUPERFAMILY SSF53597 1 164 1.37E-47 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XFUD_11415 bae9975df892c6e6769247d5fd1ab0e2 623 Pfam PF00005 ABC transporter 20 180 3.0E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_11415 bae9975df892c6e6769247d5fd1ab0e2 623 SUPERFAMILY SSF52540 2 240 1.36E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11415 bae9975df892c6e6769247d5fd1ab0e2 623 Pfam PF00005 ABC transporter 331 464 5.3E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_11415 bae9975df892c6e6769247d5fd1ab0e2 623 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_11415 bae9975df892c6e6769247d5fd1ab0e2 623 Gene3D G3DSA:1.10.287.380 547 623 2.9E-22 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 XFUD_11415 bae9975df892c6e6769247d5fd1ab0e2 623 Gene3D G3DSA:3.40.50.300 3 274 2.3E-64 T 11-10-2018 XFUD_11415 bae9975df892c6e6769247d5fd1ab0e2 623 Pfam PF16326 ABC transporter C-terminal domain 554 621 5.8E-20 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 XFUD_11415 bae9975df892c6e6769247d5fd1ab0e2 623 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_11415 bae9975df892c6e6769247d5fd1ab0e2 623 SUPERFAMILY SSF52540 308 508 2.63E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11415 bae9975df892c6e6769247d5fd1ab0e2 623 Pfam PF12848 ABC transporter 219 293 2.1E-10 T 11-10-2018 IPR032781 ABC-transporter extension domain XFUD_11415 bae9975df892c6e6769247d5fd1ab0e2 623 SMART SM00382 28 225 4.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_11415 bae9975df892c6e6769247d5fd1ab0e2 623 SMART SM00382 339 509 9.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_11415 bae9975df892c6e6769247d5fd1ab0e2 623 Gene3D G3DSA:3.40.50.300 277 541 4.8E-66 T 11-10-2018 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 74 339 1.1E-44 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 TIGRFAM TIGR01273 speA: arginine decarboxylase 3 623 1.4E-269 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 Gene3D G3DSA:3.20.20.10 65 344 5.7E-213 T 11-10-2018 IPR029066 PLP-binding barrel XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 1 624 40.958 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 534 555 1.6E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 88 102 1.6E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 192 214 1.6E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 319 336 1.6E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 456 477 1.6E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 481 506 1.6E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 64 79 1.6E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 142 157 1.6E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01180 Arginine decarboxylase signature 168 189 1.6E-66 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 270 286 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 SUPERFAMILY SSF50621 449 560 6.38E-6 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PIRSF PIRSF001336 1 625 1.3E-239 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 Gene3D G3DSA:1.20.58.930 361 452 5.7E-213 T 11-10-2018 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 SUPERFAMILY SSF51419 64 341 2.45E-61 T 11-10-2018 IPR029066 PLP-binding barrel XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 Gene3D G3DSA:2.40.37.10 12 559 5.7E-213 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 329 348 5.3E-15 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 96 114 5.3E-15 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 235 248 5.3E-15 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 534 547 5.3E-15 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFUD_00600 cdd40d65cc909e176c592ca7a1437034 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 119 131 5.3E-15 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFUD_01240 70bf52617019b653c7f9faa4736c394f 867 PIRSF PIRSF036687 1 865 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XFUD_01240 70bf52617019b653c7f9faa4736c394f 867 Gene3D G3DSA:3.30.499.10 690 866 6.1E-64 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XFUD_01240 70bf52617019b653c7f9faa4736c394f 867 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.5E-93 T 11-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XFUD_01240 70bf52617019b653c7f9faa4736c394f 867 Gene3D G3DSA:3.40.1060.10 385 688 6.5E-148 T 11-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 XFUD_01240 70bf52617019b653c7f9faa4736c394f 867 SUPERFAMILY SSF52016 162 372 9.42E-65 T 11-10-2018 XFUD_01240 70bf52617019b653c7f9faa4736c394f 867 SUPERFAMILY SSF53732 379 860 4.19E-145 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 XFUD_01240 70bf52617019b653c7f9faa4736c394f 867 SUPERFAMILY SSF74778 1 160 2.22E-63 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XFUD_01240 70bf52617019b653c7f9faa4736c394f 867 Gene3D G3DSA:1.25.40.310 1 161 5.2E-64 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XFUD_01240 70bf52617019b653c7f9faa4736c394f 867 Gene3D G3DSA:3.20.19.10 162 361 2.6E-68 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 XFUD_01240 70bf52617019b653c7f9faa4736c394f 867 Pfam PF00330 Aconitase family (aconitate hydratase) 478 821 6.1E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 XFUD_01240 70bf52617019b653c7f9faa4736c394f 867 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.6E-60 T 11-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XFUD_01240 70bf52617019b653c7f9faa4736c394f 867 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 858 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 XFUD_01240 70bf52617019b653c7f9faa4736c394f 867 ProSitePatterns PS00450 Aconitase family signature 1. 709 726 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 XFUD_01240 70bf52617019b653c7f9faa4736c394f 867 Gene3D G3DSA:3.30.499.10 409 536 6.5E-148 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 XFUD_06030 8ca0d4b32b04ccf9a3033ccf9af20328 311 SUPERFAMILY SSF50494 64 268 2.59E-12 T 11-10-2018 IPR009003 Peptidase S1, PA clan XFUD_06030 8ca0d4b32b04ccf9a3033ccf9af20328 311 Gene3D G3DSA:2.40.10.10 87 199 4.5E-21 T 11-10-2018 XFUD_06030 8ca0d4b32b04ccf9a3033ccf9af20328 311 Gene3D G3DSA:2.40.10.10 202 310 1.5E-6 T 11-10-2018 XFUD_04720 3832b229c90ce6c4c4fe66a2b2c71000 290 Gene3D G3DSA:3.90.226.10 11 229 6.6E-77 T 11-10-2018 XFUD_04720 3832b229c90ce6c4c4fe66a2b2c71000 290 SUPERFAMILY SSF52096 66 257 1.19E-35 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFUD_04720 3832b229c90ce6c4c4fe66a2b2c71000 290 Pfam PF00378 Enoyl-CoA hydratase/isomerase 69 214 3.0E-20 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 XFUD_08260 4571ee19a751f81cb09002908e58f058 90 PIRSF PIRSF029827 1 90 8.4E-39 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XFUD_08260 4571ee19a751f81cb09002908e58f058 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 26.076 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XFUD_08260 4571ee19a751f81cb09002908e58f058 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.5E-35 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XFUD_08260 4571ee19a751f81cb09002908e58f058 90 SUPERFAMILY SSF111148 1 89 4.71E-33 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 XFUD_08260 4571ee19a751f81cb09002908e58f058 90 Gene3D G3DSA:1.10.3880.10 1 90 1.7E-31 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 XFUD_08260 4571ee19a751f81cb09002908e58f058 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 64 2.0E-33 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 XFUD_05515 65b0e40db64fed91fa8a0755163ea79e 347 Pfam PF06723 MreB/Mbl protein 11 339 2.0E-150 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XFUD_05515 65b0e40db64fed91fa8a0755163ea79e 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 8.7E-160 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XFUD_05515 65b0e40db64fed91fa8a0755163ea79e 347 Gene3D G3DSA:3.90.640.10 191 264 8.7E-130 T 11-10-2018 XFUD_05515 65b0e40db64fed91fa8a0755163ea79e 347 SUPERFAMILY SSF53067 9 153 2.07E-38 T 11-10-2018 XFUD_05515 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 4.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XFUD_05515 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 4.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XFUD_05515 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 4.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XFUD_05515 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 4.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XFUD_05515 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 4.7E-62 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 XFUD_05515 65b0e40db64fed91fa8a0755163ea79e 347 SUPERFAMILY SSF53067 155 340 5.81E-48 T 11-10-2018 XFUD_05515 65b0e40db64fed91fa8a0755163ea79e 347 Gene3D G3DSA:3.30.420.40 14 332 8.7E-130 T 11-10-2018 XFUD_05515 65b0e40db64fed91fa8a0755163ea79e 347 SMART SM00268 10 345 0.0086 T 11-10-2018 IPR004000 Actin family XFUD_05515 65b0e40db64fed91fa8a0755163ea79e 347 Gene3D G3DSA:3.30.420.40 159 322 8.7E-130 T 11-10-2018 XFUD_02805 76789c88ec01150b13da4b1d4f2b5c93 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 245 3.1E-58 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XFUD_02805 76789c88ec01150b13da4b1d4f2b5c93 411 Gene3D G3DSA:3.40.47.10 256 400 1.5E-55 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_02805 76789c88ec01150b13da4b1d4f2b5c93 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 409 3.5E-196 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 XFUD_02805 76789c88ec01150b13da4b1d4f2b5c93 411 SUPERFAMILY SSF53901 213 410 1.92E-74 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_02805 76789c88ec01150b13da4b1d4f2b5c93 411 SMART SM00825 Beta-ketoacyl synthase 5 411 2.6E-16 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain XFUD_02805 76789c88ec01150b13da4b1d4f2b5c93 411 Gene3D G3DSA:3.40.47.10 1 254 1.1E-86 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_02805 76789c88ec01150b13da4b1d4f2b5c93 411 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site XFUD_02805 76789c88ec01150b13da4b1d4f2b5c93 411 PIRSF PIRSF000447 1 411 6.1E-185 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 XFUD_02805 76789c88ec01150b13da4b1d4f2b5c93 411 SUPERFAMILY SSF53901 2 251 1.07E-76 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_02805 76789c88ec01150b13da4b1d4f2b5c93 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 2.2E-40 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal XFUD_02525 570c39615e03906597186b6f1486f480 456 SUPERFAMILY SSF54631 340 453 8.97E-19 T 11-10-2018 XFUD_02525 570c39615e03906597186b6f1486f480 456 SMART SM00116 343 390 2.0E-8 T 11-10-2018 IPR000644 CBS domain XFUD_02525 570c39615e03906597186b6f1486f480 456 Gene3D G3DSA:3.40.50.1100 40 153 3.4E-96 T 11-10-2018 XFUD_02525 570c39615e03906597186b6f1486f480 456 Pfam PF00571 CBS domain 344 388 8.9E-9 T 11-10-2018 IPR000644 CBS domain XFUD_02525 570c39615e03906597186b6f1486f480 456 Gene3D G3DSA:3.40.50.1100 9 308 3.4E-96 T 11-10-2018 XFUD_02525 570c39615e03906597186b6f1486f480 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 302 1.0E-56 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XFUD_02525 570c39615e03906597186b6f1486f480 456 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 XFUD_02525 570c39615e03906597186b6f1486f480 456 SUPERFAMILY SSF53686 4 321 8.51E-82 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XFUD_02525 570c39615e03906597186b6f1486f480 456 Gene3D G3DSA:3.10.580.10 338 456 6.8E-17 T 11-10-2018 XFUD_05560 1ab4b9dfc24776d0c12e0dfca29aa08b 85 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 81 1.3E-25 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 XFUD_05560 1ab4b9dfc24776d0c12e0dfca29aa08b 85 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 17.049 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 XFUD_05560 1ab4b9dfc24776d0c12e0dfca29aa08b 85 Gene3D G3DSA:3.30.1070.10 19 78 2.8E-24 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 XFUD_05560 1ab4b9dfc24776d0c12e0dfca29aa08b 85 Pfam PF03776 Septum formation topological specificity factor MinE 13 80 3.0E-21 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 XFUD_05560 1ab4b9dfc24776d0c12e0dfca29aa08b 85 SUPERFAMILY SSF55229 32 82 9.15E-13 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 XFUD_00040 a513cd2b2680144a33f675fb451f1638 397 SUPERFAMILY SSF48452 320 382 2.72E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_00040 a513cd2b2680144a33f675fb451f1638 397 Gene3D G3DSA:1.25.40.10 108 222 2.9E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_00040 a513cd2b2680144a33f675fb451f1638 397 Pfam PF13181 Tetratricopeptide repeat 183 208 0.19 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_00040 a513cd2b2680144a33f675fb451f1638 397 Pfam PF13181 Tetratricopeptide repeat 354 381 0.056 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_00040 a513cd2b2680144a33f675fb451f1638 397 SUPERFAMILY SSF48452 113 274 3.03E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_00040 a513cd2b2680144a33f675fb451f1638 397 Gene3D G3DSA:1.25.40.10 314 396 2.4E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_00040 a513cd2b2680144a33f675fb451f1638 397 Pfam PF13432 Tetratricopeptide repeat 113 173 4.1E-4 T 11-10-2018 XFUD_00040 a513cd2b2680144a33f675fb451f1638 397 SMART SM00028 320 352 160.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_00040 a513cd2b2680144a33f675fb451f1638 397 SMART SM00028 353 386 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_00040 a513cd2b2680144a33f675fb451f1638 397 SMART SM00028 144 177 350.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_00040 a513cd2b2680144a33f675fb451f1638 397 SMART SM00028 179 212 1.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_00040 a513cd2b2680144a33f675fb451f1638 397 Gene3D G3DSA:1.25.40.10 223 302 1.1E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_11340 d79b43173a84ddfdd14055c759b82c38 172 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 158 5.2E-33 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 XFUD_11340 d79b43173a84ddfdd14055c759b82c38 172 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 6 74 1.4E-4 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 XFUD_11340 d79b43173a84ddfdd14055c759b82c38 172 SUPERFAMILY SSF53155 4 82 2.16E-16 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 XFUD_11340 d79b43173a84ddfdd14055c759b82c38 172 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 129 135 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 XFUD_11340 d79b43173a84ddfdd14055c759b82c38 172 Gene3D G3DSA:3.30.160.70 4 74 2.0E-14 T 11-10-2018 XFUD_11340 d79b43173a84ddfdd14055c759b82c38 172 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 8 159 44.065 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 XFUD_11340 d79b43173a84ddfdd14055c759b82c38 172 SUPERFAMILY SSF46767 78 160 3.92E-30 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 XFUD_11340 d79b43173a84ddfdd14055c759b82c38 172 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 160 2.3E-30 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 XFUD_11340 d79b43173a84ddfdd14055c759b82c38 172 Gene3D G3DSA:1.10.10.10 77 160 2.6E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_00980 85d83dc103d089a72f8ef61e665d2398 126 PIRSF PIRSF006246 1 125 5.2E-47 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XFUD_00980 85d83dc103d089a72f8ef61e665d2398 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 67.486 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XFUD_00980 85d83dc103d089a72f8ef61e665d2398 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 122 4.0E-64 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XFUD_00980 85d83dc103d089a72f8ef61e665d2398 126 SUPERFAMILY SSF50692 1 121 1.09E-45 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily XFUD_00980 85d83dc103d089a72f8ef61e665d2398 126 Gene3D G3DSA:2.40.40.20 1 126 3.5E-53 T 11-10-2018 XFUD_00980 85d83dc103d089a72f8ef61e665d2398 126 Pfam PF02261 Aspartate decarboxylase 1 114 3.9E-47 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XFUD_00980 85d83dc103d089a72f8ef61e665d2398 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 2.4E-48 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 XFUD_04890 18999e314e0d8ca22aefe03745392ff5 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 46.246 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 XFUD_04890 18999e314e0d8ca22aefe03745392ff5 275 Gene3D G3DSA:2.30.30.30 118 195 1.4E-30 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 XFUD_04890 18999e314e0d8ca22aefe03745392ff5 275 PIRSF PIRSF002158 9 275 2.2E-97 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04890 18999e314e0d8ca22aefe03745392ff5 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.1E-33 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04890 18999e314e0d8ca22aefe03745392ff5 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04890 18999e314e0d8ca22aefe03745392ff5 275 SUPERFAMILY SSF50104 126 272 2.17E-57 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily XFUD_04890 18999e314e0d8ca22aefe03745392ff5 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 4.4E-54 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 XFUD_04890 18999e314e0d8ca22aefe03745392ff5 275 Gene3D G3DSA:4.10.950.10 196 274 1.2E-34 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04890 18999e314e0d8ca22aefe03745392ff5 275 SUPERFAMILY SSF50249 3 125 6.17E-47 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_04890 18999e314e0d8ca22aefe03745392ff5 275 SMART SM01382 124 253 1.4E-89 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 XFUD_04890 18999e314e0d8ca22aefe03745392ff5 275 SMART SM01383 42 118 2.7E-42 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04890 18999e314e0d8ca22aefe03745392ff5 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 1.4E-131 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 XFUD_04890 18999e314e0d8ca22aefe03745392ff5 275 Gene3D G3DSA:2.40.50.140 1 114 5.2E-46 T 11-10-2018 XFUD_03985 88707f976efcc92c6ad123802001000a 429 SUPERFAMILY SSF53335 139 427 8.52E-67 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_03985 88707f976efcc92c6ad123802001000a 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 235 425 3.2E-52 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 XFUD_03985 88707f976efcc92c6ad123802001000a 429 Gene3D G3DSA:1.10.940.10 5 140 7.2E-30 T 11-10-2018 IPR035926 NusB-like superfamily XFUD_03985 88707f976efcc92c6ad123802001000a 429 SUPERFAMILY SSF48013 7 144 2.13E-25 T 11-10-2018 IPR035926 NusB-like superfamily XFUD_03985 88707f976efcc92c6ad123802001000a 429 Gene3D G3DSA:3.40.50.150 226 428 6.9E-58 T 11-10-2018 XFUD_03985 88707f976efcc92c6ad123802001000a 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 312 324 1.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XFUD_03985 88707f976efcc92c6ad123802001000a 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 410 427 1.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XFUD_03985 88707f976efcc92c6ad123802001000a 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 217 231 1.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XFUD_03985 88707f976efcc92c6ad123802001000a 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 246 256 1.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XFUD_03985 88707f976efcc92c6ad123802001000a 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 362 378 1.1E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase XFUD_03985 88707f976efcc92c6ad123802001000a 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 311 322 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 XFUD_03985 88707f976efcc92c6ad123802001000a 429 Gene3D G3DSA:3.30.70.1170 168 225 5.2E-18 T 11-10-2018 XFUD_03985 88707f976efcc92c6ad123802001000a 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 427 1.8E-101 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 XFUD_03985 88707f976efcc92c6ad123802001000a 429 Pfam PF01029 NusB family 8 128 8.2E-17 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 XFUD_04990 86614b0c318f6e0591fec61b1b690797 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.144 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04990 86614b0c318f6e0591fec61b1b690797 126 Gene3D G3DSA:3.90.1030.10 1 116 3.8E-41 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04990 86614b0c318f6e0591fec61b1b690797 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04990 86614b0c318f6e0591fec61b1b690797 126 Pfam PF01196 Ribosomal protein L17 20 115 2.6E-29 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04990 86614b0c318f6e0591fec61b1b690797 126 SUPERFAMILY SSF64263 1 119 5.36E-46 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04990 86614b0c318f6e0591fec61b1b690797 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 116 5.0E-42 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_03415 b6620d073732127311c5fc2d5692959a 411 SUPERFAMILY SSF53067 200 378 3.04E-44 T 11-10-2018 XFUD_03415 b6620d073732127311c5fc2d5692959a 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 411 30.25 T 11-10-2018 IPR020823 Cell division protein FtsA XFUD_03415 b6620d073732127311c5fc2d5692959a 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 1.4E-158 T 11-10-2018 IPR020823 Cell division protein FtsA XFUD_03415 b6620d073732127311c5fc2d5692959a 411 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.6E-28 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 XFUD_03415 b6620d073732127311c5fc2d5692959a 411 Gene3D G3DSA:3.30.1490.110 87 170 7.2E-119 T 11-10-2018 XFUD_03415 b6620d073732127311c5fc2d5692959a 411 SMART SM00842 10 197 1.1E-97 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 XFUD_03415 b6620d073732127311c5fc2d5692959a 411 Gene3D G3DSA:3.90.640.10 236 301 7.2E-119 T 11-10-2018 XFUD_03415 b6620d073732127311c5fc2d5692959a 411 Gene3D G3DSA:3.30.420.40 13 360 7.2E-119 T 11-10-2018 XFUD_03415 b6620d073732127311c5fc2d5692959a 411 Pfam PF14450 Cell division protein FtsA 11 181 1.6E-11 T 11-10-2018 XFUD_03415 b6620d073732127311c5fc2d5692959a 411 PIRSF PIRSF003101 1 411 4.3E-147 T 11-10-2018 IPR020823 Cell division protein FtsA XFUD_03415 b6620d073732127311c5fc2d5692959a 411 SUPERFAMILY SSF53067 9 198 1.25E-58 T 11-10-2018 XFUD_03415 b6620d073732127311c5fc2d5692959a 411 Gene3D G3DSA:3.30.420.40 198 353 7.2E-119 T 11-10-2018 XFUD_03415 b6620d073732127311c5fc2d5692959a 411 Pfam PF14450 Cell division protein FtsA 208 361 1.5E-23 T 11-10-2018 XFUD_03205 98170756652869bb1086edbb926464ac 162 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 7 136 1.6E-31 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 XFUD_03205 98170756652869bb1086edbb926464ac 162 SUPERFAMILY SSF52540 28 124 1.19E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_03205 98170756652869bb1086edbb926464ac 162 Gene3D G3DSA:3.40.50.300 1 150 1.5E-32 T 11-10-2018 XFUD_03205 98170756652869bb1086edbb926464ac 162 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 125 7.3E-29 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 XFUD_06220 4b13aac5ca9a36faf4cb0d015d0a2c43 485 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 20 476 3.4E-193 T 11-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 XFUD_06220 4b13aac5ca9a36faf4cb0d015d0a2c43 485 Pfam PF01458 Uncharacterized protein family (UPF0051) 223 456 5.2E-68 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 XFUD_06220 4b13aac5ca9a36faf4cb0d015d0a2c43 485 SUPERFAMILY SSF101960 41 482 8.24E-137 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily XFUD_02825 2aef52f457138ca48a71af8e0e4caf24 117 Pfam PF07238 PilZ domain 13 103 8.3E-7 T 11-10-2018 IPR009875 PilZ domain GO:0035438 XFUD_02825 2aef52f457138ca48a71af8e0e4caf24 117 Gene3D G3DSA:2.40.10.220 1 117 1.4E-42 T 11-10-2018 XFUD_01145 8709c85046a5ab325da8b011e2221802 999 PRINTS PR00723 Subtilisin serine protease family (S8) signature 160 173 1.6E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFUD_01145 8709c85046a5ab325da8b011e2221802 999 PRINTS PR00723 Subtilisin serine protease family (S8) signature 375 391 1.6E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFUD_01145 8709c85046a5ab325da8b011e2221802 999 PRINTS PR00723 Subtilisin serine protease family (S8) signature 120 139 1.6E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFUD_01145 8709c85046a5ab325da8b011e2221802 999 Gene3D G3DSA:2.40.128.130 688 997 9.3E-37 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFUD_01145 8709c85046a5ab325da8b011e2221802 999 Pfam PF03797 Autotransporter beta-domain 735 970 1.4E-31 T 11-10-2018 IPR005546 Autotransporter beta-domain XFUD_01145 8709c85046a5ab325da8b011e2221802 999 Pfam PF00082 Subtilase family 120 426 1.2E-38 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 XFUD_01145 8709c85046a5ab325da8b011e2221802 999 Gene3D G3DSA:3.40.50.200 63 435 4.3E-61 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XFUD_01145 8709c85046a5ab325da8b011e2221802 999 SUPERFAMILY SSF52743 103 436 3.8E-59 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XFUD_01145 8709c85046a5ab325da8b011e2221802 999 Pfam PF12951 Passenger-associated-transport-repeat 466 495 1.7E-8 T 11-10-2018 IPR013425 Autotransporter-associated beta strand repeat XFUD_01145 8709c85046a5ab325da8b011e2221802 999 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 465 496 1.0E-10 T 11-10-2018 IPR013425 Autotransporter-associated beta strand repeat XFUD_01145 8709c85046a5ab325da8b011e2221802 999 SMART SM00869 731 991 3.7E-24 T 11-10-2018 IPR005546 Autotransporter beta-domain XFUD_01145 8709c85046a5ab325da8b011e2221802 999 SUPERFAMILY SSF103515 697 995 2.62E-37 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFUD_01145 8709c85046a5ab325da8b011e2221802 999 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 125 136 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site XFUD_01145 8709c85046a5ab325da8b011e2221802 999 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 376 386 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site XFUD_04300 a686348eeb9db618968519081a8904b3 384 Hamap MF_00456 Glutamate 5-kinase [proB]. 19 271 34.212 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XFUD_04300 a686348eeb9db618968519081a8904b3 384 Gene3D G3DSA:2.30.130.10 278 384 1.0E-27 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 XFUD_04300 a686348eeb9db618968519081a8904b3 384 SUPERFAMILY SSF88697 289 383 2.98E-22 T 11-10-2018 IPR015947 PUA-like superfamily XFUD_04300 a686348eeb9db618968519081a8904b3 384 SMART SM00359 289 376 9.1E-13 T 11-10-2018 IPR002478 PUA domain GO:0003723 XFUD_04300 a686348eeb9db618968519081a8904b3 384 TIGRFAM TIGR01027 proB: glutamate 5-kinase 20 382 2.5E-116 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XFUD_04300 a686348eeb9db618968519081a8904b3 384 ProSitePatterns PS00902 Glutamate 5-kinase signature. 219 236 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XFUD_04300 a686348eeb9db618968519081a8904b3 384 Pfam PF00696 Amino acid kinase family 20 247 7.3E-39 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XFUD_04300 a686348eeb9db618968519081a8904b3 384 PRINTS PR00474 Glutamate 5-kinase family signature 160 187 3.2E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XFUD_04300 a686348eeb9db618968519081a8904b3 384 PRINTS PR00474 Glutamate 5-kinase family signature 56 70 3.2E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XFUD_04300 a686348eeb9db618968519081a8904b3 384 PRINTS PR00474 Glutamate 5-kinase family signature 128 149 3.2E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XFUD_04300 a686348eeb9db618968519081a8904b3 384 PRINTS PR00474 Glutamate 5-kinase family signature 221 241 3.2E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 XFUD_04300 a686348eeb9db618968519081a8904b3 384 SUPERFAMILY SSF53633 19 269 2.49E-60 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFUD_04300 a686348eeb9db618968519081a8904b3 384 Pfam PF01472 PUA domain 289 364 2.3E-19 T 11-10-2018 IPR002478 PUA domain GO:0003723 XFUD_04300 a686348eeb9db618968519081a8904b3 384 PIRSF PIRSF000729 15 384 1.6E-126 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 XFUD_04300 a686348eeb9db618968519081a8904b3 384 Gene3D G3DSA:3.40.1160.10 13 277 1.1E-74 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFUD_10105 e070ea90620b441d179c2a768d564812 362 SUPERFAMILY SSF53383 3 360 2.81E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFUD_10105 e070ea90620b441d179c2a768d564812 362 Gene3D G3DSA:3.90.1150.10 258 362 8.8E-38 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFUD_10105 e070ea90620b441d179c2a768d564812 362 Pfam PF00266 Aminotransferase class-V 5 350 1.1E-50 T 11-10-2018 IPR000192 Aminotransferase class V domain XFUD_10105 e070ea90620b441d179c2a768d564812 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 361 7.1E-156 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 XFUD_10105 e070ea90620b441d179c2a768d564812 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 3 361 46.744 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 XFUD_10105 e070ea90620b441d179c2a768d564812 362 PIRSF PIRSF000525 1 362 1.2E-144 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 XFUD_10105 e070ea90620b441d179c2a768d564812 362 Gene3D G3DSA:3.40.640.10 18 256 1.1E-80 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFUD_05110 0a175e6f9b0e6fd2af4edc49c9d697b5 226 SUPERFAMILY SSF56784 10 221 2.9E-47 T 11-10-2018 IPR036412 HAD-like superfamily XFUD_05110 0a175e6f9b0e6fd2af4edc49c9d697b5 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 191 5.9E-14 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFUD_05110 0a175e6f9b0e6fd2af4edc49c9d697b5 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 5.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFUD_05110 0a175e6f9b0e6fd2af4edc49c9d697b5 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 5.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFUD_05110 0a175e6f9b0e6fd2af4edc49c9d697b5 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 5.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFUD_05110 0a175e6f9b0e6fd2af4edc49c9d697b5 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 5.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFUD_05110 0a175e6f9b0e6fd2af4edc49c9d697b5 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 191 4.9E-25 T 11-10-2018 XFUD_05110 0a175e6f9b0e6fd2af4edc49c9d697b5 226 Gene3D G3DSA:1.10.150.240 26 91 6.7E-46 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XFUD_05110 0a175e6f9b0e6fd2af4edc49c9d697b5 226 Gene3D G3DSA:3.40.50.1000 13 195 6.7E-46 T 11-10-2018 IPR023214 HAD superfamily XFUD_08040 e8422e8c7d15a565f99f0a787ca1cdd6 230 PIRSF PIRSF006293 1 225 7.8E-81 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XFUD_08040 e8422e8c7d15a565f99f0a787ca1cdd6 230 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 6.9E-58 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XFUD_08040 e8422e8c7d15a565f99f0a787ca1cdd6 230 SUPERFAMILY SSF52402 1 221 1.28E-60 T 11-10-2018 XFUD_08040 e8422e8c7d15a565f99f0a787ca1cdd6 230 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 4.7E-74 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XFUD_08040 e8422e8c7d15a565f99f0a787ca1cdd6 230 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 55.967 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 XFUD_08040 e8422e8c7d15a565f99f0a787ca1cdd6 230 Gene3D G3DSA:3.40.50.620 1 223 1.7E-71 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_01735 928d07250fc94bf5eb2f586350830d24 351 PRINTS PR01805 VacJ lipoprotein signature 117 130 1.3E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XFUD_01735 928d07250fc94bf5eb2f586350830d24 351 PRINTS PR01805 VacJ lipoprotein signature 185 202 1.3E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XFUD_01735 928d07250fc94bf5eb2f586350830d24 351 PRINTS PR01805 VacJ lipoprotein signature 134 150 1.3E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XFUD_01735 928d07250fc94bf5eb2f586350830d24 351 PRINTS PR01805 VacJ lipoprotein signature 221 238 1.3E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XFUD_01735 928d07250fc94bf5eb2f586350830d24 351 Pfam PF04333 MlaA lipoprotein 116 307 7.1E-67 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 XFUD_00555 b4524e2363dd7fbef74c3d06ca44d924 141 SUPERFAMILY SSF102400 1 140 1.57E-37 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily XFUD_00555 b4524e2363dd7fbef74c3d06ca44d924 141 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 136 7.5E-34 T 11-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 XFUD_00555 b4524e2363dd7fbef74c3d06ca44d924 141 Gene3D G3DSA:3.40.50.10110 1 140 7.5E-38 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 SUPERFAMILY SSF50249 130 187 9.25E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 8.5E-19 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 2 61 3.9E-11 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 Gene3D G3DSA:2.40.50.140 130 187 2.9E-19 T 11-10-2018 XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 SUPERFAMILY SSF50249 68 128 2.06E-9 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 SMART SM01185 68 123 2.1E-13 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 PIRSF PIRSF005901 1 188 6.5E-62 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 2 187 1.8E-97 T 11-10-2018 IPR011897 Translation elongation factor P-like, YeiP XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 1 187 36.271 T 11-10-2018 IPR011897 Translation elongation factor P-like, YeiP XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 SUPERFAMILY SSF50104 2 62 1.2E-8 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 1.6E-12 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 Gene3D G3DSA:2.30.30.30 1 62 1.8E-7 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 Gene3D G3DSA:2.40.50.140 66 128 8.5E-14 T 11-10-2018 XFUD_09600 3ca69b4fc73ba2187bd348975b72caed 188 SMART SM00841 131 186 1.0E-20 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XFUD_08705 ef76e52a16ba2ac47223339f2974ed4c 442 SUPERFAMILY SSF53092 7 179 3.14E-56 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XFUD_08705 ef76e52a16ba2ac47223339f2974ed4c 442 PRINTS PR00599 Methionine aminopeptidase-1 signature 375 387 2.7E-6 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFUD_08705 ef76e52a16ba2ac47223339f2974ed4c 442 PRINTS PR00599 Methionine aminopeptidase-1 signature 257 273 2.7E-6 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 XFUD_08705 ef76e52a16ba2ac47223339f2974ed4c 442 Pfam PF00557 Metallopeptidase family M24 187 417 5.4E-57 T 11-10-2018 IPR000994 Peptidase M24 XFUD_08705 ef76e52a16ba2ac47223339f2974ed4c 442 Gene3D G3DSA:3.90.230.10 177 441 2.2E-87 T 11-10-2018 XFUD_08705 ef76e52a16ba2ac47223339f2974ed4c 442 SMART SM01011 7 141 1.1E-68 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 XFUD_08705 ef76e52a16ba2ac47223339f2974ed4c 442 Gene3D G3DSA:3.40.350.10 8 176 3.4E-57 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XFUD_08705 ef76e52a16ba2ac47223339f2974ed4c 442 SUPERFAMILY SSF55920 182 438 7.85E-78 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like XFUD_08705 ef76e52a16ba2ac47223339f2974ed4c 442 Pfam PF05195 Aminopeptidase P, N-terminal domain 12 131 2.3E-39 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 XFUD_09690 e8ea19aa8621851b877c51f376cc1721 430 SUPERFAMILY SSF53686 1 428 1.05E-120 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XFUD_09690 e8ea19aa8621851b877c51f376cc1721 430 Gene3D G3DSA:3.40.50.1100 100 403 7.2E-121 T 11-10-2018 XFUD_09690 e8ea19aa8621851b877c51f376cc1721 430 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 94 377 5.9E-22 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XFUD_09690 e8ea19aa8621851b877c51f376cc1721 430 Pfam PF14821 Threonine synthase N terminus 3 59 2.8E-10 T 11-10-2018 IPR029144 Threonine synthase, N-terminal XFUD_09690 e8ea19aa8621851b877c51f376cc1721 430 Gene3D G3DSA:3.40.50.1100 89 397 7.2E-121 T 11-10-2018 XFUD_09690 e8ea19aa8621851b877c51f376cc1721 430 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 94 108 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 XFUD_09690 e8ea19aa8621851b877c51f376cc1721 430 TIGRFAM TIGR00260 thrC: threonine synthase 80 396 9.5E-69 T 11-10-2018 IPR004450 Threonine synthase-like XFUD_09690 e8ea19aa8621851b877c51f376cc1721 430 Gene3D G3DSA:3.90.1380.10 1 78 4.7E-12 T 11-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily XFUD_00460 9e5b693cdf0175e0224cbff0d90885f2 136 Gene3D G3DSA:2.30.30.790 3 121 7.0E-13 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_00460 9e5b693cdf0175e0224cbff0d90885f2 136 PIRSF PIRSF002191 1 135 2.8E-49 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_00460 9e5b693cdf0175e0224cbff0d90885f2 136 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 118 29.074 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_00460 9e5b693cdf0175e0224cbff0d90885f2 136 SUPERFAMILY SSF50104 7 122 5.01E-44 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily XFUD_00460 9e5b693cdf0175e0224cbff0d90885f2 136 PRINTS PR00061 Ribosomal protein L19 signature 92 117 1.1E-36 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_00460 9e5b693cdf0175e0224cbff0d90885f2 136 PRINTS PR00061 Ribosomal protein L19 signature 38 67 1.1E-36 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_00460 9e5b693cdf0175e0224cbff0d90885f2 136 PRINTS PR00061 Ribosomal protein L19 signature 8 37 1.1E-36 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_00460 9e5b693cdf0175e0224cbff0d90885f2 136 Pfam PF01245 Ribosomal protein L19 8 116 1.6E-47 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_00460 9e5b693cdf0175e0224cbff0d90885f2 136 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 7 117 2.0E-46 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_00460 9e5b693cdf0175e0224cbff0d90885f2 136 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_08020 22f2acadc87c34680cd54169624dbe8e 910 SUPERFAMILY SSF52743 12 348 6.41E-55 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XFUD_08020 22f2acadc87c34680cd54169624dbe8e 910 Gene3D G3DSA:2.40.128.130 600 910 4.4E-32 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFUD_08020 22f2acadc87c34680cd54169624dbe8e 910 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 376 408 1.0E-11 T 11-10-2018 IPR013425 Autotransporter-associated beta strand repeat XFUD_08020 22f2acadc87c34680cd54169624dbe8e 910 SMART SM00869 642 900 5.5E-20 T 11-10-2018 IPR005546 Autotransporter beta-domain XFUD_08020 22f2acadc87c34680cd54169624dbe8e 910 Pfam PF12951 Passenger-associated-transport-repeat 377 407 1.2E-9 T 11-10-2018 IPR013425 Autotransporter-associated beta strand repeat XFUD_08020 22f2acadc87c34680cd54169624dbe8e 910 PRINTS PR00723 Subtilisin serine protease family (S8) signature 74 87 8.4E-11 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFUD_08020 22f2acadc87c34680cd54169624dbe8e 910 PRINTS PR00723 Subtilisin serine protease family (S8) signature 31 50 8.4E-11 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFUD_08020 22f2acadc87c34680cd54169624dbe8e 910 PRINTS PR00723 Subtilisin serine protease family (S8) signature 286 302 8.4E-11 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFUD_08020 22f2acadc87c34680cd54169624dbe8e 910 SUPERFAMILY SSF103515 608 905 2.75E-31 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFUD_08020 22f2acadc87c34680cd54169624dbe8e 910 Pfam PF00082 Subtilase family 31 337 4.3E-36 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 XFUD_08020 22f2acadc87c34680cd54169624dbe8e 910 Pfam PF03797 Autotransporter beta-domain 649 879 3.1E-28 T 11-10-2018 IPR005546 Autotransporter beta-domain XFUD_08020 22f2acadc87c34680cd54169624dbe8e 910 Gene3D G3DSA:3.40.50.200 9 348 5.2E-56 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XFUD_08020 22f2acadc87c34680cd54169624dbe8e 910 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 287 297 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site XFUD_08020 22f2acadc87c34680cd54169624dbe8e 910 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 36 47 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site XFUD_10480 f9ff694daad7e2a3416fc6cdb60bc678 536 Pfam PF03023 MviN-like protein 31 498 1.9E-119 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFUD_10480 f9ff694daad7e2a3416fc6cdb60bc678 536 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 6 493 19.417 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFUD_10480 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 262 288 8.6E-70 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFUD_10480 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 435 452 8.6E-70 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFUD_10480 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 136 160 8.6E-70 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFUD_10480 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 160 181 8.6E-70 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFUD_10480 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 360 379 8.6E-70 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFUD_10480 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 55 71 8.6E-70 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFUD_10480 f9ff694daad7e2a3416fc6cdb60bc678 536 PRINTS PR01806 Virulence factor MviN signature 36 55 8.6E-70 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFUD_10480 f9ff694daad7e2a3416fc6cdb60bc678 536 PIRSF PIRSF002869 1 533 3.9E-140 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFUD_10480 f9ff694daad7e2a3416fc6cdb60bc678 536 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 6 524 3.4E-116 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ XFUD_12225 624b79b09382b99afa464dcd00b64b35 343 Gene3D G3DSA:3.30.450.90 18 124 6.9E-37 T 11-10-2018 XFUD_12225 624b79b09382b99afa464dcd00b64b35 343 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 28 333 7.0E-129 T 11-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 XFUD_12225 624b79b09382b99afa464dcd00b64b35 343 Pfam PF00437 Type II/IV secretion system protein 23 322 1.1E-55 T 11-10-2018 IPR001482 Type II/IV secretion system protein XFUD_12225 624b79b09382b99afa464dcd00b64b35 343 Gene3D G3DSA:3.40.50.300 125 342 2.7E-58 T 11-10-2018 XFUD_12225 624b79b09382b99afa464dcd00b64b35 343 SUPERFAMILY SSF52540 21 326 5.55E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00250 57e76482d982d4b8619b86ea7036afc2 341 Pfam PF04055 Radical SAM superfamily 51 206 3.2E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XFUD_00250 57e76482d982d4b8619b86ea7036afc2 341 Hamap MF_01694 Biotin synthase [bioB]. 7 315 41.084 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XFUD_00250 57e76482d982d4b8619b86ea7036afc2 341 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 222 312 4.0E-20 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XFUD_00250 57e76482d982d4b8619b86ea7036afc2 341 PIRSF PIRSF001619 2 321 1.3E-129 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XFUD_00250 57e76482d982d4b8619b86ea7036afc2 341 SMART SM00729 45 251 3.5E-35 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XFUD_00250 57e76482d982d4b8619b86ea7036afc2 341 TIGRFAM TIGR00433 bioB: biotin synthase 17 312 5.8E-120 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XFUD_00250 57e76482d982d4b8619b86ea7036afc2 341 SMART SM00876 222 314 8.0E-48 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 XFUD_00250 57e76482d982d4b8619b86ea7036afc2 341 Gene3D G3DSA:3.20.20.70 6 317 4.2E-124 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_00250 57e76482d982d4b8619b86ea7036afc2 341 SUPERFAMILY SSF102114 7 315 3.27E-90 T 11-10-2018 XFUD_10325 bde6dc87022a8c4c71676c84f383c707 275 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 15 123 1.4E-42 T 11-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XFUD_10325 bde6dc87022a8c4c71676c84f383c707 275 Pfam PF14489 QueF-like protein 187 263 1.3E-27 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XFUD_10325 bde6dc87022a8c4c71676c84f383c707 275 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 275 128.003 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XFUD_10325 bde6dc87022a8c4c71676c84f383c707 275 Gene3D G3DSA:3.30.1130.10 15 127 2.3E-39 T 11-10-2018 XFUD_10325 bde6dc87022a8c4c71676c84f383c707 275 SUPERFAMILY SSF55620 174 263 9.64E-11 T 11-10-2018 XFUD_10325 bde6dc87022a8c4c71676c84f383c707 275 TIGRFAM TIGR03138 QueF: queuine synthase 4 275 3.5E-103 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XFUD_10325 bde6dc87022a8c4c71676c84f383c707 275 Gene3D G3DSA:3.30.1130.10 133 275 5.3E-48 T 11-10-2018 XFUD_10325 bde6dc87022a8c4c71676c84f383c707 275 PIRSF PIRSF004750 1 275 9.8E-103 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 XFUD_12315 eec128479a647049ae8aa242b7555024 339 Gene3D G3DSA:2.40.10.10 129 231 1.6E-13 T 11-10-2018 XFUD_12315 eec128479a647049ae8aa242b7555024 339 Gene3D G3DSA:2.40.10.10 232 336 3.9E-10 T 11-10-2018 XFUD_12315 eec128479a647049ae8aa242b7555024 339 SUPERFAMILY SSF50494 120 332 8.27E-14 T 11-10-2018 IPR009003 Peptidase S1, PA clan XFUD_04920 f842ec5448b27dbd98f3f443b1af4c54 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 85 22.488 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04920 f842ec5448b27dbd98f3f443b1af4c54 88 Pfam PF00366 Ribosomal protein S17 15 82 2.0E-30 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04920 f842ec5448b27dbd98f3f443b1af4c54 88 SUPERFAMILY SSF50249 10 86 3.73E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_04920 f842ec5448b27dbd98f3f443b1af4c54 88 Gene3D G3DSA:2.40.50.140 7 87 4.9E-33 T 11-10-2018 XFUD_04920 f842ec5448b27dbd98f3f443b1af4c54 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 11 81 1.0E-35 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04920 f842ec5448b27dbd98f3f443b1af4c54 88 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 1.6E-10 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04920 f842ec5448b27dbd98f3f443b1af4c54 88 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 1.6E-10 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04920 f842ec5448b27dbd98f3f443b1af4c54 88 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 1.6E-10 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04920 f842ec5448b27dbd98f3f443b1af4c54 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 11 81 1.7E-32 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_01550 31e4c84bfef930c6d67b70276f7c1c3d 809 Pfam PF00912 Transglycosylase 67 235 1.8E-57 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_01550 31e4c84bfef930c6d67b70276f7c1c3d 809 Pfam PF17092 Penicillin-binding protein OB-like domain 322 419 2.4E-14 T 11-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_01550 31e4c84bfef930c6d67b70276f7c1c3d 809 Pfam PF00905 Penicillin binding protein transpeptidase domain 424 604 5.7E-25 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XFUD_01550 31e4c84bfef930c6d67b70276f7c1c3d 809 SUPERFAMILY SSF56601 216 788 5.98E-118 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFUD_01550 31e4c84bfef930c6d67b70276f7c1c3d 809 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 69 756 9.2E-176 T 11-10-2018 XFUD_01550 31e4c84bfef930c6d67b70276f7c1c3d 809 Gene3D G3DSA:1.10.3810.10 52 249 5.8E-69 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_01550 31e4c84bfef930c6d67b70276f7c1c3d 809 SUPERFAMILY SSF53955 47 263 5.34E-70 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_01115 981f50134128565cc140e7199d8069d1 467 SUPERFAMILY SSF51182 183 466 3.34E-88 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily XFUD_01115 981f50134128565cc140e7199d8069d1 467 Pfam PF01050 Mannose-6-phosphate isomerase 312 462 1.0E-73 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 XFUD_01115 981f50134128565cc140e7199d8069d1 467 Gene3D G3DSA:3.90.550.10 3 345 4.3E-118 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_01115 981f50134128565cc140e7199d8069d1 467 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 466 2.6E-230 T 11-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 XFUD_01115 981f50134128565cc140e7199d8069d1 467 Gene3D G3DSA:2.60.120.10 346 451 1.0E-18 T 11-10-2018 IPR014710 RmlC-like jelly roll fold XFUD_01115 981f50134128565cc140e7199d8069d1 467 Pfam PF00483 Nucleotidyl transferase 6 284 4.0E-73 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XFUD_01115 981f50134128565cc140e7199d8069d1 467 SUPERFAMILY SSF53448 5 280 2.69E-72 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_06040 8594b89aa56bbb86a53914e02f5bf75f 215 SUPERFAMILY SSF52833 28 198 3.94E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_06040 8594b89aa56bbb86a53914e02f5bf75f 215 Gene3D G3DSA:3.40.30.10 23 215 6.0E-50 T 11-10-2018 XFUD_06040 8594b89aa56bbb86a53914e02f5bf75f 215 ProSitePatterns PS00194 Thioredoxin family active site. 51 69 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XFUD_06040 8594b89aa56bbb86a53914e02f5bf75f 215 PIRSF PIRSF001488 6 212 2.6E-28 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL XFUD_06040 8594b89aa56bbb86a53914e02f5bf75f 215 Pfam PF13462 Thioredoxin 48 197 8.7E-8 T 11-10-2018 IPR012336 Thioredoxin-like fold XFUD_11700 2cb67605ee2f6526deadd25198417bd1 253 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 19 235 37.871 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XFUD_11700 2cb67605ee2f6526deadd25198417bd1 253 SUPERFAMILY SSF52141 17 236 3.05E-88 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XFUD_11700 2cb67605ee2f6526deadd25198417bd1 253 Pfam PF03167 Uracil DNA glycosylase superfamily 69 223 3.5E-21 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XFUD_11700 2cb67605ee2f6526deadd25198417bd1 253 SMART SM00986 64 224 7.8E-36 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XFUD_11700 2cb67605ee2f6526deadd25198417bd1 253 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 20 228 3.5E-78 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XFUD_11700 2cb67605ee2f6526deadd25198417bd1 253 Gene3D G3DSA:3.40.470.10 2 242 4.4E-92 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XFUD_11700 2cb67605ee2f6526deadd25198417bd1 253 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 72 81 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 XFUD_11700 2cb67605ee2f6526deadd25198417bd1 253 SMART SM00987 64 224 7.8E-36 T 11-10-2018 XFUD_11065 f36375b975430378b940f84fbb4e8247 207 SUPERFAMILY SSF52540 4 192 2.19E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11065 f36375b975430378b940f84fbb4e8247 207 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 6 181 8.9E-47 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 XFUD_11065 f36375b975430378b940f84fbb4e8247 207 Gene3D G3DSA:3.40.50.300 2 205 2.0E-57 T 11-10-2018 XFUD_11065 f36375b975430378b940f84fbb4e8247 207 Pfam PF01121 Dephospho-CoA kinase 5 181 4.6E-55 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 XFUD_11065 f36375b975430378b940f84fbb4e8247 207 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 199 24.893 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 XFUD_06165 d6b7c7debf0929c2cc863c464c9ac9cb 356 SUPERFAMILY SSF53822 64 341 4.52E-62 T 11-10-2018 IPR028082 Periplasmic binding protein-like I XFUD_06165 d6b7c7debf0929c2cc863c464c9ac9cb 356 SUPERFAMILY SSF47413 2 58 3.8E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_06165 d6b7c7debf0929c2cc863c464c9ac9cb 356 Pfam PF13377 Periplasmic binding protein-like domain 173 339 1.1E-35 T 11-10-2018 XFUD_06165 d6b7c7debf0929c2cc863c464c9ac9cb 356 Gene3D G3DSA:3.40.50.2300 165 294 2.5E-64 T 11-10-2018 XFUD_06165 d6b7c7debf0929c2cc863c464c9ac9cb 356 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 4.9E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XFUD_06165 d6b7c7debf0929c2cc863c464c9ac9cb 356 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 4.9E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XFUD_06165 d6b7c7debf0929c2cc863c464c9ac9cb 356 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 11-10-2018 XFUD_06165 d6b7c7debf0929c2cc863c464c9ac9cb 356 Gene3D G3DSA:1.10.260.40 1 56 1.5E-21 T 11-10-2018 XFUD_06165 d6b7c7debf0929c2cc863c464c9ac9cb 356 Gene3D G3DSA:3.40.50.2300 57 311 2.5E-64 T 11-10-2018 XFUD_06165 d6b7c7debf0929c2cc863c464c9ac9cb 356 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 2.1E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XFUD_06165 d6b7c7debf0929c2cc863c464c9ac9cb 356 SMART SM00354 3 73 1.0E-21 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 XFUD_10300 e6efe687b509358ea7f473bc71dc1bba 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 50.854 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 XFUD_10300 e6efe687b509358ea7f473bc71dc1bba 357 Gene3D G3DSA:3.40.718.10 1 357 5.8E-145 T 11-10-2018 XFUD_10300 e6efe687b509358ea7f473bc71dc1bba 357 SUPERFAMILY SSF53659 1 357 1.28E-119 T 11-10-2018 XFUD_10300 e6efe687b509358ea7f473bc71dc1bba 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 8.8E-152 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 XFUD_10300 e6efe687b509358ea7f473bc71dc1bba 357 SMART SM01329 4 353 1.8E-197 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XFUD_10300 e6efe687b509358ea7f473bc71dc1bba 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 XFUD_10300 e6efe687b509358ea7f473bc71dc1bba 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 353 1.9E-130 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 XFUD_04375 cd89de379575016abbc658c7be2d214b 999 Gene3D G3DSA:3.40.50.200 63 435 1.5E-61 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XFUD_04375 cd89de379575016abbc658c7be2d214b 999 Pfam PF03797 Autotransporter beta-domain 735 970 2.4E-31 T 11-10-2018 IPR005546 Autotransporter beta-domain XFUD_04375 cd89de379575016abbc658c7be2d214b 999 PRINTS PR00723 Subtilisin serine protease family (S8) signature 125 144 3.4E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFUD_04375 cd89de379575016abbc658c7be2d214b 999 PRINTS PR00723 Subtilisin serine protease family (S8) signature 165 178 3.4E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFUD_04375 cd89de379575016abbc658c7be2d214b 999 PRINTS PR00723 Subtilisin serine protease family (S8) signature 375 391 3.4E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related XFUD_04375 cd89de379575016abbc658c7be2d214b 999 SUPERFAMILY SSF103515 697 995 5.36E-37 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFUD_04375 cd89de379575016abbc658c7be2d214b 999 SUPERFAMILY SSF52743 108 436 1.14E-58 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 XFUD_04375 cd89de379575016abbc658c7be2d214b 999 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 465 496 1.0E-10 T 11-10-2018 IPR013425 Autotransporter-associated beta strand repeat XFUD_04375 cd89de379575016abbc658c7be2d214b 999 Pfam PF12951 Passenger-associated-transport-repeat 466 495 1.7E-8 T 11-10-2018 IPR013425 Autotransporter-associated beta strand repeat XFUD_04375 cd89de379575016abbc658c7be2d214b 999 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 130 141 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site XFUD_04375 cd89de379575016abbc658c7be2d214b 999 SMART SM00869 731 991 4.6E-24 T 11-10-2018 IPR005546 Autotransporter beta-domain XFUD_04375 cd89de379575016abbc658c7be2d214b 999 Gene3D G3DSA:2.40.128.130 689 996 3.0E-36 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFUD_04375 cd89de379575016abbc658c7be2d214b 999 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 376 386 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site XFUD_04375 cd89de379575016abbc658c7be2d214b 999 Pfam PF00082 Subtilase family 125 426 1.3E-38 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 XFUD_07815 2d440f5c4c958e856df5b86c749aa94e 608 Gene3D G3DSA:3.30.300.150 475 588 5.4E-15 T 11-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_07815 2d440f5c4c958e856df5b86c749aa94e 608 SUPERFAMILY SSF52540 34 223 2.17E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_07815 2d440f5c4c958e856df5b86c749aa94e 608 Gene3D G3DSA:1.20.272.10 242 359 2.5E-35 T 11-10-2018 XFUD_07815 2d440f5c4c958e856df5b86c749aa94e 608 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 361 4.0E-25 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 XFUD_07815 2d440f5c4c958e856df5b86c749aa94e 608 SMART SM00382 37 188 1.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_07815 2d440f5c4c958e856df5b86c749aa94e 608 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 484 603 1.3E-11 T 11-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_07815 2d440f5c4c958e856df5b86c749aa94e 608 Gene3D G3DSA:1.10.8.60 8 239 1.5E-101 T 11-10-2018 XFUD_07815 2d440f5c4c958e856df5b86c749aa94e 608 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.5E-5 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFUD_07815 2d440f5c4c958e856df5b86c749aa94e 608 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.5E-5 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFUD_07815 2d440f5c4c958e856df5b86c749aa94e 608 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 353 1.2E-126 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 XFUD_07815 2d440f5c4c958e856df5b86c749aa94e 608 SUPERFAMILY SSF48019 243 363 6.46E-29 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 XFUD_07815 2d440f5c4c958e856df5b86c749aa94e 608 Pfam PF13177 DNA polymerase III, delta subunit 20 178 3.6E-45 T 11-10-2018 XFUD_07815 2d440f5c4c958e856df5b86c749aa94e 608 Gene3D G3DSA:3.40.50.300 13 177 1.5E-101 T 11-10-2018 XFUD_10755 33c473c3c075f03f4d0cf4df0be5e0d3 135 Gene3D G3DSA:1.10.443.10 4 101 1.7E-10 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFUD_10755 33c473c3c075f03f4d0cf4df0be5e0d3 135 SUPERFAMILY SSF56349 17 90 5.0E-11 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFUD_10755 33c473c3c075f03f4d0cf4df0be5e0d3 135 Pfam PF00589 Phage integrase family 34 77 1.9E-5 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PIRSF PIRSF000238 1 521 7.3E-264 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 1.8E-38 T 11-10-2018 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 216 235 1.8E-38 T 11-10-2018 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 1.8E-38 T 11-10-2018 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 1.8E-38 T 11-10-2018 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 1.8E-38 T 11-10-2018 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 Gene3D G3DSA:3.50.50.60 214 508 7.8E-110 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 2.2E-232 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 SUPERFAMILY SSF52833 105 198 2.14E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 SUPERFAMILY SSF52833 1 103 5.93E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 SUPERFAMILY SSF51905 208 515 4.48E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 Gene3D G3DSA:3.40.30.80 1 201 8.9E-56 T 11-10-2018 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 267 277 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 215 237 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 247 262 2.3E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 Gene3D G3DSA:3.50.50.60 327 450 7.8E-110 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 Pfam PF13192 Thioredoxin domain 127 196 1.4E-8 T 11-10-2018 IPR012336 Thioredoxin-like fold XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 214 504 5.0E-46 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XFUD_06475 25d9f66812e52fb56a578f1d3720cc24 531 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 XFUD_08060 c0cb7ae55370a87a4ffb9239f6332d06 106 Gene3D G3DSA:2.30.30.110 12 106 5.9E-19 T 11-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor XFUD_08060 c0cb7ae55370a87a4ffb9239f6332d06 106 SUPERFAMILY SSF50118 2 105 7.52E-24 T 11-10-2018 XFUD_08060 c0cb7ae55370a87a4ffb9239f6332d06 106 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 102 5.6E-20 T 11-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 XFUD_01155 189a6b86b116abe6fc700ce1a7298800 191 Pfam PF07273 Protein of unknown function (DUF1439) 58 156 1.4E-8 T 11-10-2018 IPR010835 Protein of unknown function DUF1439 XFUD_01155 189a6b86b116abe6fc700ce1a7298800 191 Gene3D G3DSA:3.15.10.40 56 184 1.4E-6 T 11-10-2018 XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 Gene3D G3DSA:3.30.250.10 271 345 6.9E-25 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 326 5.1E-165 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 SUPERFAMILY SSF52540 6 269 2.27E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 SUPERFAMILY SSF54752 270 327 5.76E-20 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 ProSitePatterns PS00321 recA signature. 215 223 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 Hamap MF_00268 Protein RecA [recA]. 5 331 50.397 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 Gene3D G3DSA:3.40.50.300 30 270 4.7E-78 T 11-10-2018 XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 127 156 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 212 240 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 165 194 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 299 316 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 93 122 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 PRINTS PR00142 RecA protein signature 245 274 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 SMART SM00382 57 230 1.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_00505 f90e6c4c541278d6a60fbfaf42573156 347 Pfam PF00154 recA bacterial DNA recombination protein 7 270 2.0E-139 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 XFUD_03705 463b7b48e2e415d4d8d282eca5d5d421 220 Pfam PF00484 Carbonic anhydrase 37 188 2.1E-49 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XFUD_03705 463b7b48e2e415d4d8d282eca5d5d421 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XFUD_03705 463b7b48e2e415d4d8d282eca5d5d421 220 SMART SM00947 30 193 1.6E-66 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XFUD_03705 463b7b48e2e415d4d8d282eca5d5d421 220 SUPERFAMILY SSF53056 2 212 6.41E-77 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 XFUD_03705 463b7b48e2e415d4d8d282eca5d5d421 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 XFUD_03705 463b7b48e2e415d4d8d282eca5d5d421 220 Gene3D G3DSA:3.40.1050.10 1 209 1.6E-80 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 XFUD_01015 313a3f61999b2d03dadc9c5eb3020c24 125 SUPERFAMILY SSF89919 4 112 6.41E-27 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily XFUD_01015 313a3f61999b2d03dadc9c5eb3020c24 125 Gene3D G3DSA:3.30.300.20 3 105 8.9E-28 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta XFUD_01015 313a3f61999b2d03dadc9c5eb3020c24 125 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 7 110 25.894 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XFUD_01015 313a3f61999b2d03dadc9c5eb3020c24 125 Pfam PF02033 Ribosome-binding factor A 8 110 7.8E-27 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XFUD_01015 313a3f61999b2d03dadc9c5eb3020c24 125 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 XFUD_01015 313a3f61999b2d03dadc9c5eb3020c24 125 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 7 113 3.1E-25 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XFUD_01015 313a3f61999b2d03dadc9c5eb3020c24 125 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 97 1.0E-44 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 XFUD_01095 1aa6e74079ba36f84e392fca7527eed9 351 Gene3D G3DSA:3.90.25.10 200 330 8.2E-119 T 11-10-2018 XFUD_01095 1aa6e74079ba36f84e392fca7527eed9 351 SUPERFAMILY SSF51735 3 336 4.62E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_01095 1aa6e74079ba36f84e392fca7527eed9 351 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 337 8.7E-153 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 XFUD_01095 1aa6e74079ba36f84e392fca7527eed9 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 321 1.3E-88 T 11-10-2018 IPR016040 NAD(P)-binding domain XFUD_01095 1aa6e74079ba36f84e392fca7527eed9 351 Gene3D G3DSA:3.40.50.720 4 322 8.2E-119 T 11-10-2018 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 Gene3D G3DSA:3.40.50.140 1 129 7.7E-45 T 11-10-2018 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 SMART SM00493 1 100 3.2E-21 T 11-10-2018 IPR006171 TOPRIM domain XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 637 51.685 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 3 592 1.4E-150 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 Pfam PF01131 DNA topoisomerase 123 539 2.1E-108 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 277 291 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 SMART SM00436 99 187 3.1E-30 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 74 87 3.0E-32 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 282 291 3.0E-32 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 466 480 3.0E-32 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 353 369 3.0E-32 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 157 175 3.0E-32 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 563 595 1.1E-7 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 613 651 0.18 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 Gene3D G3DSA:1.10.460.10 130 540 4.4E-118 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 Pfam PF01751 Toprim domain 3 108 1.3E-21 T 11-10-2018 IPR006171 TOPRIM domain XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 SUPERFAMILY SSF56712 1 571 1.26E-149 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 Gene3D G3DSA:2.70.20.10 179 450 4.4E-118 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 Gene3D G3DSA:1.10.290.10 248 368 4.4E-118 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 SUPERFAMILY SSF57783 557 592 1.28E-7 T 11-10-2018 XFUD_12165 b92b0068a8fb9f10bbb769bb8723c7e2 660 SMART SM00437 240 503 9.2E-77 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 XFUD_09060 7c9a71e3c4bc0c9bc3e0608985eecd65 368 Gene3D G3DSA:1.10.287.470 93 165 9.9E-59 T 11-10-2018 XFUD_09060 7c9a71e3c4bc0c9bc3e0608985eecd65 368 Gene3D G3DSA:2.40.30.170 45 279 9.9E-59 T 11-10-2018 XFUD_09060 7c9a71e3c4bc0c9bc3e0608985eecd65 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 355 7.9E-61 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XFUD_09060 7c9a71e3c4bc0c9bc3e0608985eecd65 368 Gene3D G3DSA:2.40.420.20 38 351 9.9E-59 T 11-10-2018 XFUD_09060 7c9a71e3c4bc0c9bc3e0608985eecd65 368 Gene3D G3DSA:2.40.50.100 59 205 9.9E-59 T 11-10-2018 XFUD_09060 7c9a71e3c4bc0c9bc3e0608985eecd65 368 SUPERFAMILY SSF111369 49 260 2.22E-20 T 11-10-2018 XFUD_09060 7c9a71e3c4bc0c9bc3e0608985eecd65 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 260 4.1E-14 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 476 2.9E-152 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 PRINTS PR01050 Pyruvate kinase family signature 220 246 5.3E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 PRINTS PR01050 Pyruvate kinase family signature 190 204 5.3E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 PRINTS PR01050 Pyruvate kinase family signature 316 332 5.3E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 PRINTS PR01050 Pyruvate kinase family signature 297 315 5.3E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 PRINTS PR01050 Pyruvate kinase family signature 272 296 5.3E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 PRINTS PR01050 Pyruvate kinase family signature 63 79 5.3E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 PRINTS PR01050 Pyruvate kinase family signature 247 271 5.3E-56 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 SUPERFAMILY SSF52935 326 476 8.5E-37 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 SUPERFAMILY SSF51621 4 342 4.54E-87 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 Gene3D G3DSA:3.40.1380.20 339 472 2.0E-153 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 Pfam PF00224 Pyruvate kinase, barrel domain 6 342 4.4E-115 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 473 4.1E-25 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 SUPERFAMILY SSF50800 74 171 1.29E-22 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 Gene3D G3DSA:2.40.33.10 74 172 2.0E-153 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 XFUD_03490 a232c91f5d6654271b82e3d86dd76d17 488 Gene3D G3DSA:3.20.20.60 6 338 2.0E-153 T 11-10-2018 XFUD_11385 0951b8cff07ca32b9a151f64625611a2 220 SUPERFAMILY SSF46894 143 208 7.48E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XFUD_11385 0951b8cff07ca32b9a151f64625611a2 220 Pfam PF00072 Response regulator receiver domain 5 116 3.8E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11385 0951b8cff07ca32b9a151f64625611a2 220 Gene3D G3DSA:3.40.50.12740 3 208 1.2E-51 T 11-10-2018 XFUD_11385 0951b8cff07ca32b9a151f64625611a2 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 203 2.7E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFUD_11385 0951b8cff07ca32b9a151f64625611a2 220 SMART SM00421 146 203 1.3E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFUD_11385 0951b8cff07ca32b9a151f64625611a2 220 SUPERFAMILY SSF52172 2 132 1.27E-27 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_11385 0951b8cff07ca32b9a151f64625611a2 220 SMART SM00448 3 116 3.2E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11385 0951b8cff07ca32b9a151f64625611a2 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.1E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFUD_11385 0951b8cff07ca32b9a151f64625611a2 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.1E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFUD_11385 0951b8cff07ca32b9a151f64625611a2 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.1E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 XFUD_10825 8ef57673d76a9794ea6d818d04d10014 195 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 193 9.2E-64 T 11-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 XFUD_10825 8ef57673d76a9794ea6d818d04d10014 195 Gene3D G3DSA:2.60.220.40 90 157 8.2E-12 T 11-10-2018 XFUD_10825 8ef57673d76a9794ea6d818d04d10014 195 Gene3D G3DSA:2.40.50.230 1 87 4.2E-26 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XFUD_10825 8ef57673d76a9794ea6d818d04d10014 195 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 118 7.7E-34 T 11-10-2018 IPR006531 Gp5 N-terminal XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 342 3.6E-83 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 SUPERFAMILY SSF64484 16 1363 0.0 T 11-10-2018 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 SMART SM00663 235 514 5.9E-180 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.3E-18 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1380 18.722 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 1.0E-77 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:1.10.150.390 1316 1374 1.1E-27 T 11-10-2018 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:1.10.274.100 490 640 1.6E-40 T 11-10-2018 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:2.40.50.100 949 1023 4.9E-27 T 11-10-2018 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:1.10.132.30 641 790 4.5E-62 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:1.10.40.90 374 416 5.5E-22 T 11-10-2018 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:2.40.50.100 1024 1127 8.4E-27 T 11-10-2018 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 3.5E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 3.9E-27 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 5.1E-28 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:1.10.1790.20 1136 1314 1.5E-62 T 11-10-2018 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 Gene3D G3DSA:2.40.50.100 1152 1215 1.5E-62 T 11-10-2018 XFUD_11460 8718ef1cd180408b0895833aa37423aa 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_11770 24349ddd3ffd288639f57ed1b59bb560 1489 Pfam PF04898 Glutamate synthase central domain 466 749 1.0E-97 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 XFUD_11770 24349ddd3ffd288639f57ed1b59bb560 1489 Pfam PF00310 Glutamine amidotransferases class-II 24 436 7.4E-158 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain XFUD_11770 24349ddd3ffd288639f57ed1b59bb560 1489 SUPERFAMILY SSF51395 455 1201 9.16E-249 T 11-10-2018 XFUD_11770 24349ddd3ffd288639f57ed1b59bb560 1489 SUPERFAMILY SSF56235 24 439 2.67E-132 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFUD_11770 24349ddd3ffd288639f57ed1b59bb560 1489 SUPERFAMILY SSF69336 1220 1475 2.49E-83 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 XFUD_11770 24349ddd3ffd288639f57ed1b59bb560 1489 Gene3D G3DSA:2.160.20.60 1209 1479 1.1E-96 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 XFUD_11770 24349ddd3ffd288639f57ed1b59bb560 1489 Pfam PF01645 Conserved region in glutamate synthase 805 1167 2.1E-148 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 XFUD_11770 24349ddd3ffd288639f57ed1b59bb560 1489 Gene3D G3DSA:3.60.20.10 24 554 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFUD_11770 24349ddd3ffd288639f57ed1b59bb560 1489 Gene3D G3DSA:3.20.20.70 492 1183 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_11770 24349ddd3ffd288639f57ed1b59bb560 1489 Gene3D G3DSA:3.20.20.70 441 804 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_11770 24349ddd3ffd288639f57ed1b59bb560 1489 Pfam PF01493 GXGXG motif 1246 1428 3.0E-74 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 XFUD_04655 475022fffd529f6dba00edceb0fc8d60 97 Gene3D G3DSA:2.20.130.30 32 97 1.3E-16 T 11-10-2018 XFUD_04655 475022fffd529f6dba00edceb0fc8d60 97 Pfam PF11191 Protein of unknown function (DUF2782) 40 97 3.5E-15 T 11-10-2018 IPR021357 Protein of unknown function DUF2782 XFUD_09805 4c18b5b6c2571c66bd8514733f5bc9bb 635 Gene3D G3DSA:3.40.50.920 497 621 3.0E-35 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XFUD_09805 4c18b5b6c2571c66bd8514733f5bc9bb 635 SUPERFAMILY SSF52518 319 505 1.03E-53 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFUD_09805 4c18b5b6c2571c66bd8514733f5bc9bb 635 SUPERFAMILY SSF52922 493 619 9.82E-26 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XFUD_09805 4c18b5b6c2571c66bd8514733f5bc9bb 635 SUPERFAMILY SSF52518 6 383 3.21E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFUD_09805 4c18b5b6c2571c66bd8514733f5bc9bb 635 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 622 44.289 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFUD_09805 4c18b5b6c2571c66bd8514733f5bc9bb 635 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFUD_09805 4c18b5b6c2571c66bd8514733f5bc9bb 635 SMART SM00861 321 485 3.5E-58 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XFUD_09805 4c18b5b6c2571c66bd8514733f5bc9bb 635 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 617 5.7E-247 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFUD_09805 4c18b5b6c2571c66bd8514733f5bc9bb 635 ProSitePatterns PS00802 Transketolase signature 2. 427 443 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFUD_09805 4c18b5b6c2571c66bd8514733f5bc9bb 635 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 285 5.6E-111 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFUD_09805 4c18b5b6c2571c66bd8514733f5bc9bb 635 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 1.9E-36 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XFUD_09805 4c18b5b6c2571c66bd8514733f5bc9bb 635 Gene3D G3DSA:3.40.50.970 318 492 1.8E-62 T 11-10-2018 XFUD_09805 4c18b5b6c2571c66bd8514733f5bc9bb 635 Pfam PF02780 Transketolase, C-terminal domain 498 613 4.1E-22 T 11-10-2018 IPR033248 Transketolase, C-terminal domain XFUD_04260 d4c60f8c78340b32b4f1d5cfc867985e 467 SMART SM00840 339 408 2.8E-13 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 XFUD_04260 d4c60f8c78340b32b4f1d5cfc867985e 467 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 465 36.452 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 XFUD_04260 d4c60f8c78340b32b4f1d5cfc867985e 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.5E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XFUD_04260 d4c60f8c78340b32b4f1d5cfc867985e 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 1.5E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XFUD_04260 d4c60f8c78340b32b4f1d5cfc867985e 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.5E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XFUD_04260 d4c60f8c78340b32b4f1d5cfc867985e 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 1.5E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 XFUD_04260 d4c60f8c78340b32b4f1d5cfc867985e 467 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 464 1.1E-145 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 XFUD_04260 d4c60f8c78340b32b4f1d5cfc867985e 467 Gene3D G3DSA:3.40.50.620 1 306 1.8E-120 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_04260 d4c60f8c78340b32b4f1d5cfc867985e 467 Pfam PF09190 DALR domain 340 408 5.8E-14 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 XFUD_04260 d4c60f8c78340b32b4f1d5cfc867985e 467 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 19 313 2.9E-111 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 XFUD_04260 d4c60f8c78340b32b4f1d5cfc867985e 467 SUPERFAMILY SSF52374 4 314 2.28E-87 T 11-10-2018 XFUD_04260 d4c60f8c78340b32b4f1d5cfc867985e 467 SUPERFAMILY SSF47323 317 464 2.48E-29 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_04260 d4c60f8c78340b32b4f1d5cfc867985e 467 Gene3D G3DSA:1.20.120.640 307 465 4.6E-34 T 11-10-2018 XFUD_03200 00337b858885f78da64cc5d6e8658398 496 Gene3D G3DSA:3.40.50.10260 4 215 3.0E-53 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 XFUD_03200 00337b858885f78da64cc5d6e8658398 496 Gene3D G3DSA:3.40.1190.20 219 491 9.1E-80 T 11-10-2018 IPR029056 Ribokinase-like XFUD_03200 00337b858885f78da64cc5d6e8658398 496 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 209 22.043 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 XFUD_03200 00337b858885f78da64cc5d6e8658398 496 SUPERFAMILY SSF53613 226 490 1.06E-73 T 11-10-2018 IPR029056 Ribokinase-like XFUD_03200 00337b858885f78da64cc5d6e8658398 496 PIRSF PIRSF017184 6 492 4.4E-118 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 XFUD_03200 00337b858885f78da64cc5d6e8658398 496 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 430 440 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site XFUD_03200 00337b858885f78da64cc5d6e8658398 496 SUPERFAMILY SSF64153 7 246 6.93E-57 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 XFUD_03200 00337b858885f78da64cc5d6e8658398 496 Pfam PF03853 YjeF-related protein N-terminus 30 186 1.9E-39 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 XFUD_03200 00337b858885f78da64cc5d6e8658398 496 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 224 491 22.347 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 XFUD_03200 00337b858885f78da64cc5d6e8658398 496 Pfam PF01256 Carbohydrate kinase 247 482 3.1E-55 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 XFUD_03200 00337b858885f78da64cc5d6e8658398 496 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 11 209 1.3E-36 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 XFUD_03200 00337b858885f78da64cc5d6e8658398 496 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 314 324 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site XFUD_03200 00337b858885f78da64cc5d6e8658398 496 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 223 491 1.4E-67 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 XFUD_07240 e9489d48c1023adcf479d351ab91e6ea 91 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 86 4.0E-9 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XFUD_07240 e9489d48c1023adcf479d351ab91e6ea 91 Gene3D G3DSA:3.30.2310.20 1 88 8.0E-30 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XFUD_07240 e9489d48c1023adcf479d351ab91e6ea 91 SUPERFAMILY SSF143011 2 85 3.4E-21 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XFUD_07240 e9489d48c1023adcf479d351ab91e6ea 91 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 87 2.4E-14 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XFUD_01295 2e708cd749675de52d8a0aaa39786293 100 Gene3D G3DSA:2.40.30.170 77 97 3.1E-11 T 11-10-2018 XFUD_01295 2e708cd749675de52d8a0aaa39786293 100 SUPERFAMILY SSF111369 6 91 3.4E-7 T 11-10-2018 XFUD_01295 2e708cd749675de52d8a0aaa39786293 100 Gene3D G3DSA:2.40.50.100 34 75 3.1E-11 T 11-10-2018 XFUD_01295 2e708cd749675de52d8a0aaa39786293 100 Gene3D G3DSA:1.10.287.470 5 33 3.1E-11 T 11-10-2018 XFUD_08760 08cf350697d14a4732102871e86243af 478 Gene3D G3DSA:1.20.1280.70 354 414 9.3E-21 T 11-10-2018 XFUD_08760 08cf350697d14a4732102871e86243af 478 Pfam PF08411 Exonuclease C-terminal 206 472 1.7E-91 T 11-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 XFUD_08760 08cf350697d14a4732102871e86243af 478 SUPERFAMILY SSF53098 2 471 2.81E-114 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFUD_08760 08cf350697d14a4732102871e86243af 478 Pfam PF00929 Exonuclease 7 185 1.8E-22 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFUD_08760 08cf350697d14a4732102871e86243af 478 Gene3D G3DSA:2.30.30.450 208 348 1.4E-40 T 11-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily XFUD_08760 08cf350697d14a4732102871e86243af 478 SMART SM00479 4 197 1.7E-4 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFUD_08760 08cf350697d14a4732102871e86243af 478 Gene3D G3DSA:3.30.420.10 2 195 4.4E-64 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFUD_08760 08cf350697d14a4732102871e86243af 478 PIRSF PIRSF000977 1 477 1.4E-176 T 11-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 XFUD_02330 b1e69d004e4c467ae25cb12ec304683a 121 Gene3D G3DSA:3.40.1350.10 10 121 7.7E-28 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XFUD_02330 b1e69d004e4c467ae25cb12ec304683a 121 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 4 116 1.4E-31 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 XFUD_02330 b1e69d004e4c467ae25cb12ec304683a 121 Pfam PF02021 Uncharacterised protein family UPF0102 12 100 2.4E-22 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 XFUD_02330 b1e69d004e4c467ae25cb12ec304683a 121 SUPERFAMILY SSF52980 6 110 1.29E-13 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XFUD_02330 b1e69d004e4c467ae25cb12ec304683a 121 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 115 21.466 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 201 2.6E-76 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 Pfam PF00117 Glutamine amidotransferase class-I 12 197 3.7E-40 T 11-10-2018 IPR017926 Glutamine amidotransferase XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 Pfam PF00958 GMP synthase C terminal domain 430 521 6.6E-43 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 Gene3D G3DSA:3.30.300.10 403 522 1.4E-50 T 11-10-2018 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 SUPERFAMILY SSF52317 9 205 7.37E-56 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 Gene3D G3DSA:3.40.50.620 207 402 3.4E-72 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 1.7E-5 T 11-10-2018 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 1.7E-5 T 11-10-2018 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 1.7E-5 T 11-10-2018 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 SUPERFAMILY SSF52402 191 443 7.06E-57 T 11-10-2018 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.6E-7 T 11-10-2018 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 1.6E-7 T 11-10-2018 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.6E-7 T 11-10-2018 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 522 55.009 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 SUPERFAMILY SSF54810 402 522 2.48E-49 T 11-10-2018 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 522 1.7E-145 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 Pfam PF02540 NAD synthase 211 291 7.1E-9 T 11-10-2018 IPR022310 NAD/GMP synthase XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.9E-6 T 11-10-2018 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00097 Anthranilate synthase component II signature 174 187 1.9E-6 T 11-10-2018 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.9E-6 T 11-10-2018 XFUD_10520 b7a63836665432f6c1f6a6d850c4fd76 522 Gene3D G3DSA:3.40.50.880 6 206 2.0E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_09855 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 Gene3D G3DSA:3.30.9.10 84 325 4.2E-132 T 11-10-2018 XFUD_09855 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 Pfam PF01266 FAD dependent oxidoreductase 7 329 3.1E-47 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 XFUD_09855 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 389 479 1.4E-12 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFUD_09855 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 Gene3D G3DSA:3.50.50.60 7 369 4.2E-132 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_09855 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 SUPERFAMILY SSF54373 231 324 9.42E-7 T 11-10-2018 XFUD_09855 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 29 7.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFUD_09855 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 6 18 7.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFUD_09855 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 47 7.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFUD_09855 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 80 92 7.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFUD_09855 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 350 362 7.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFUD_09855 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 318 324 7.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFUD_09855 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 SUPERFAMILY SSF51905 1 370 5.0E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_09855 b4c8b77c3dd60bf0b4bf355e18dc1f3c 507 Gene3D G3DSA:1.10.8.870 393 464 2.1E-22 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 XFUD_02590 fc469c500ae540497484e2b16f951004 758 Pfam PF13899 Thioredoxin-like 656 733 2.9E-13 T 11-10-2018 XFUD_02590 fc469c500ae540497484e2b16f951004 758 SUPERFAMILY SSF74863 184 301 1.83E-29 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XFUD_02590 fc469c500ae540497484e2b16f951004 758 Pfam PF11412 Disulphide bond corrector protein DsbC 184 300 8.0E-28 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain XFUD_02590 fc469c500ae540497484e2b16f951004 758 Pfam PF11412 Disulphide bond corrector protein DsbC 26 143 4.2E-29 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain XFUD_02590 fc469c500ae540497484e2b16f951004 758 SUPERFAMILY SSF74863 24 143 1.57E-30 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XFUD_02590 fc469c500ae540497484e2b16f951004 758 Gene3D G3DSA:3.40.30.10 648 754 1.1E-10 T 11-10-2018 XFUD_02590 fc469c500ae540497484e2b16f951004 758 Gene3D G3DSA:2.60.40.1250 179 318 5.2E-33 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XFUD_02590 fc469c500ae540497484e2b16f951004 758 Gene3D G3DSA:2.60.40.1250 20 154 9.5E-35 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily XFUD_02590 fc469c500ae540497484e2b16f951004 758 ProSitePatterns PS00194 Thioredoxin family active site. 666 684 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XFUD_02590 fc469c500ae540497484e2b16f951004 758 SUPERFAMILY SSF52833 654 753 9.92E-12 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_09675 adbfc38ad0ac114da76070c4feb45e77 304 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 162 183 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 XFUD_09675 adbfc38ad0ac114da76070c4feb45e77 304 Gene3D G3DSA:3.40.190.10 109 198 2.2E-62 T 11-10-2018 XFUD_09675 adbfc38ad0ac114da76070c4feb45e77 304 Gene3D G3DSA:3.30.70.120 232 303 6.0E-8 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XFUD_09675 adbfc38ad0ac114da76070c4feb45e77 304 Pfam PF01634 ATP phosphoribosyltransferase 60 223 2.3E-43 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XFUD_09675 adbfc38ad0ac114da76070c4feb45e77 304 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 12 304 29.754 T 11-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 XFUD_09675 adbfc38ad0ac114da76070c4feb45e77 304 SUPERFAMILY SSF53850 12 227 3.74E-59 T 11-10-2018 XFUD_09675 adbfc38ad0ac114da76070c4feb45e77 304 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 13 201 4.1E-52 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XFUD_09675 adbfc38ad0ac114da76070c4feb45e77 304 Gene3D G3DSA:3.40.190.10 13 226 2.2E-62 T 11-10-2018 XFUD_09675 adbfc38ad0ac114da76070c4feb45e77 304 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 207 302 4.2E-16 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XFUD_09675 adbfc38ad0ac114da76070c4feb45e77 304 Pfam PF08029 HisG, C-terminal domain 231 301 3.0E-8 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 XFUD_03850 7e0048173c2dd4efae9931182946ad2e 337 Pfam PF01544 CorA-like Mg2+ transporter protein 46 333 9.9E-60 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 XFUD_03850 7e0048173c2dd4efae9931182946ad2e 337 SUPERFAMILY SSF144083 273 334 2.88E-16 T 11-10-2018 XFUD_03850 7e0048173c2dd4efae9931182946ad2e 337 Gene3D G3DSA:1.20.58.340 147 259 1.6E-31 T 11-10-2018 XFUD_03850 7e0048173c2dd4efae9931182946ad2e 337 Gene3D G3DSA:1.20.58.340 261 337 9.2E-19 T 11-10-2018 XFUD_03850 7e0048173c2dd4efae9931182946ad2e 337 SUPERFAMILY SSF143865 3 269 8.76E-69 T 11-10-2018 XFUD_03850 7e0048173c2dd4efae9931182946ad2e 337 Gene3D G3DSA:3.30.460.20 2 146 1.3E-26 T 11-10-2018 XFUD_11645 c5308aadd105736292b3b7078cc122d3 721 SUPERFAMILY SSF49503 73 247 4.5E-21 T 11-10-2018 IPR008972 Cupredoxin XFUD_11645 c5308aadd105736292b3b7078cc122d3 721 Gene3D G3DSA:2.60.40.420 265 472 2.4E-14 T 11-10-2018 IPR008972 Cupredoxin XFUD_11645 c5308aadd105736292b3b7078cc122d3 721 SUPERFAMILY SSF49503 574 710 1.72E-14 T 11-10-2018 IPR008972 Cupredoxin XFUD_11645 c5308aadd105736292b3b7078cc122d3 721 SUPERFAMILY SSF49503 312 445 3.83E-9 T 11-10-2018 IPR008972 Cupredoxin XFUD_11645 c5308aadd105736292b3b7078cc122d3 721 Gene3D G3DSA:2.60.40.420 95 243 2.4E-30 T 11-10-2018 IPR008972 Cupredoxin XFUD_11645 c5308aadd105736292b3b7078cc122d3 721 Pfam PF07732 Multicopper oxidase 174 246 1.7E-10 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 XFUD_11645 c5308aadd105736292b3b7078cc122d3 721 Pfam PF07732 Multicopper oxidase 114 162 1.0E-4 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 XFUD_11645 c5308aadd105736292b3b7078cc122d3 721 ProSitePatterns PS00080 Multicopper oxidases signature 2. 695 706 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 XFUD_11645 c5308aadd105736292b3b7078cc122d3 721 ProSitePatterns PS00079 Multicopper oxidases signature 1. 690 710 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site XFUD_11645 c5308aadd105736292b3b7078cc122d3 721 Gene3D G3DSA:2.60.40.420 562 720 5.0E-29 T 11-10-2018 IPR008972 Cupredoxin XFUD_11645 c5308aadd105736292b3b7078cc122d3 721 Pfam PF07731 Multicopper oxidase 581 712 4.8E-13 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 SUPERFAMILY SSF51120 1543 1701 6.28E-25 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Gene3D G3DSA:2.150.10.10 1544 1594 8.8E-11 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 SUPERFAMILY SSF51120 1211 1369 4.01E-25 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Gene3D G3DSA:2.150.10.10 1872 1924 7.9E-11 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1384 1402 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1218 1236 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 SUPERFAMILY SSF51120 1377 1535 4.06E-25 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1158 1202 6.7E-13 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1490 1534 6.7E-13 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1324 1368 6.7E-13 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1988 2026 1.1E-9 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1656 1700 6.7E-13 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1822 1866 6.7E-13 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF06594 Haemolysin-type calcium binding protein related domain 992 1036 3.5E-13 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 SUPERFAMILY SSF51120 1709 1867 9.68E-25 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 PRINTS PR00313 NodO calcium binding signature 899 907 3.1E-9 T 11-10-2018 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 PRINTS PR00313 NodO calcium binding signature 917 925 3.1E-9 T 11-10-2018 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 PRINTS PR00313 NodO calcium binding signature 1083 1092 3.1E-9 T 11-10-2018 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 PRINTS PR00313 NodO calcium binding signature 869 880 3.1E-9 T 11-10-2018 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1052 1070 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 SUPERFAMILY SSF51120 838 1037 7.43E-32 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1882 1900 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 SUPERFAMILY SSF51120 1045 1203 4.97E-25 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 886 904 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 859 877 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1716 1734 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 SUPERFAMILY SSF51120 1875 2024 3.92E-25 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1545 1561 0.17 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1711 1727 0.17 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1379 1395 0.17 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1240 1256 0.85 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1954 1969 11.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1877 1893 0.17 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1622 1637 11.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1047 1063 0.17 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1124 1139 3.6 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 936 952 2.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1434 1450 0.34 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1213 1229 0.17 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1600 1616 0.34 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1904 1920 0.85 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1074 1090 0.85 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1788 1803 11.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1766 1782 2.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 854 870 0.16 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 836 852 20.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 908 924 0.068 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 889 906 0.24 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1738 1754 0.85 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1268 1284 0.34 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1572 1588 0.85 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1290 1305 3.6 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 958 973 7.8 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1406 1422 0.85 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 871 888 0.005 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1932 1948 0.34 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1102 1118 0.34 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1456 1471 3.6 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 877 895 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Gene3D G3DSA:2.150.10.10 1428 1543 4.7E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Gene3D G3DSA:2.150.10.10 1760 1871 7.3E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Gene3D G3DSA:2.150.10.10 1595 1704 3.0E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Gene3D G3DSA:2.150.10.10 1095 1206 4.1E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Gene3D G3DSA:2.150.10.10 898 1038 6.6E-29 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Gene3D G3DSA:2.150.10.10 836 897 9.5E-17 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Gene3D G3DSA:2.150.10.10 1925 2040 4.7E-29 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Gene3D G3DSA:2.150.10.10 1207 1371 2.6E-30 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1550 1568 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Gene3D G3DSA:2.150.10.10 1372 1427 6.8E-12 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Gene3D G3DSA:2.150.10.10 1705 1759 7.2E-12 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 Gene3D G3DSA:2.150.10.10 1039 1094 4.6E-12 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_10425 01e9e5a42672c493e2ce756b2c51606c 2063 SUPERFAMILY SSF103647 376 473 8.76E-6 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 XFUD_05215 8287635f6bf109cb333b336b19f64e8b 585 Pfam PF17243 POTRA domain TamA domain 1 20 100 5.3E-15 T 11-10-2018 IPR035243 TamA, POTRA domain 1 XFUD_05215 8287635f6bf109cb333b336b19f64e8b 585 Pfam PF07244 Surface antigen variable number repeat 112 172 4.0E-6 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XFUD_05215 8287635f6bf109cb333b336b19f64e8b 585 Gene3D G3DSA:3.10.20.310 18 102 6.0E-6 T 11-10-2018 XFUD_05215 8287635f6bf109cb333b336b19f64e8b 585 Gene3D G3DSA:3.10.20.310 191 267 1.1E-14 T 11-10-2018 XFUD_05215 8287635f6bf109cb333b336b19f64e8b 585 Gene3D G3DSA:2.40.160.50 268 585 1.8E-77 T 11-10-2018 XFUD_05215 8287635f6bf109cb333b336b19f64e8b 585 Gene3D G3DSA:3.10.20.310 103 190 3.5E-19 T 11-10-2018 XFUD_05215 8287635f6bf109cb333b336b19f64e8b 585 Pfam PF01103 Surface antigen 296 573 5.5E-31 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 XFUD_03975 8cd707868e19d15e8bb19e7bed470a3f 170 Pfam PF01327 Polypeptide deformylase 5 155 1.2E-50 T 11-10-2018 IPR023635 Peptide deformylase XFUD_03975 8cd707868e19d15e8bb19e7bed470a3f 170 PRINTS PR01576 Peptide deformylase signature 36 65 3.6E-37 T 11-10-2018 IPR023635 Peptide deformylase XFUD_03975 8cd707868e19d15e8bb19e7bed470a3f 170 PRINTS PR01576 Peptide deformylase signature 92 103 3.6E-37 T 11-10-2018 IPR023635 Peptide deformylase XFUD_03975 8cd707868e19d15e8bb19e7bed470a3f 170 PRINTS PR01576 Peptide deformylase signature 104 122 3.6E-37 T 11-10-2018 IPR023635 Peptide deformylase XFUD_03975 8cd707868e19d15e8bb19e7bed470a3f 170 PRINTS PR01576 Peptide deformylase signature 123 152 3.6E-37 T 11-10-2018 IPR023635 Peptide deformylase XFUD_03975 8cd707868e19d15e8bb19e7bed470a3f 170 Hamap MF_00163 Peptide deformylase [def]. 2 165 31.011 T 11-10-2018 IPR023635 Peptide deformylase XFUD_03975 8cd707868e19d15e8bb19e7bed470a3f 170 PIRSF PIRSF004749 1 170 3.9E-56 T 11-10-2018 IPR023635 Peptide deformylase XFUD_03975 8cd707868e19d15e8bb19e7bed470a3f 170 SUPERFAMILY SSF56420 2 167 3.93E-62 T 11-10-2018 IPR036821 Peptide deformylase superfamily XFUD_03975 8cd707868e19d15e8bb19e7bed470a3f 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 162 1.9E-51 T 11-10-2018 IPR023635 Peptide deformylase XFUD_03975 8cd707868e19d15e8bb19e7bed470a3f 170 Gene3D G3DSA:3.90.45.10 1 170 3.9E-61 T 11-10-2018 IPR036821 Peptide deformylase superfamily XFUD_04755 0fc9a034f81729be0f1b1f88262fd749 242 Pfam PF04402 Protein of unknown function (DUF541) 40 238 2.0E-43 T 11-10-2018 IPR007497 Protein of unknown function DUF541 XFUD_04755 0fc9a034f81729be0f1b1f88262fd749 242 Gene3D G3DSA:3.30.110.170 41 239 2.4E-59 T 11-10-2018 XFUD_04755 0fc9a034f81729be0f1b1f88262fd749 242 Gene3D G3DSA:3.30.70.2970 51 158 2.4E-59 T 11-10-2018 XFUD_01600 85008008d355564bb66f58b56a9c0fc2 63 SUPERFAMILY SSF57802 7 60 9.09E-21 T 11-10-2018 XFUD_01600 85008008d355564bb66f58b56a9c0fc2 63 PRINTS PR00163 Rubredoxin signature 41 57 4.3E-6 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 XFUD_01600 85008008d355564bb66f58b56a9c0fc2 63 PRINTS PR00163 Rubredoxin signature 11 27 4.3E-6 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 XFUD_01600 85008008d355564bb66f58b56a9c0fc2 63 Pfam PF00301 Rubredoxin 12 57 1.8E-19 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 XFUD_01600 85008008d355564bb66f58b56a9c0fc2 63 Gene3D G3DSA:2.20.28.10 3 62 6.1E-25 T 11-10-2018 XFUD_01600 85008008d355564bb66f58b56a9c0fc2 63 ProSitePatterns PS00202 Rubredoxin signature. 41 51 - T 11-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 XFUD_06490 baa11d6f0af740a1134440847a5ad937 80 PRINTS PR01249 Ribosomal protein L31 signature 60 78 2.3E-18 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_06490 baa11d6f0af740a1134440847a5ad937 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.3E-18 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_06490 baa11d6f0af740a1134440847a5ad937 80 PRINTS PR01249 Ribosomal protein L31 signature 45 60 2.3E-18 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_06490 baa11d6f0af740a1134440847a5ad937 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_06490 baa11d6f0af740a1134440847a5ad937 80 Gene3D G3DSA:2.30.170.50 1 80 1.3E-25 T 11-10-2018 XFUD_06490 baa11d6f0af740a1134440847a5ad937 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.3E-20 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_06490 baa11d6f0af740a1134440847a5ad937 80 Pfam PF01197 Ribosomal protein L31 1 79 1.1E-29 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_06490 baa11d6f0af740a1134440847a5ad937 80 SUPERFAMILY SSF143800 1 79 7.06E-23 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_06490 baa11d6f0af740a1134440847a5ad937 80 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.973 T 11-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04425 31df5752ab3d9ae61f475a1499e66790 263 PIRSF PIRSF000456 5 263 3.1E-97 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 XFUD_04425 31df5752ab3d9ae61f475a1499e66790 263 SUPERFAMILY SSF51161 5 262 2.46E-71 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFUD_04425 31df5752ab3d9ae61f475a1499e66790 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 142 1.9E-7 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_04425 31df5752ab3d9ae61f475a1499e66790 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 19 52 6.9E-7 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_04425 31df5752ab3d9ae61f475a1499e66790 263 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 263 44.829 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 XFUD_04425 31df5752ab3d9ae61f475a1499e66790 263 Gene3D G3DSA:1.20.1180.10 198 263 5.2E-22 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 XFUD_04425 31df5752ab3d9ae61f475a1499e66790 263 Gene3D G3DSA:2.160.10.10 2 190 6.2E-49 T 11-10-2018 XFUD_04425 31df5752ab3d9ae61f475a1499e66790 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 260 6.4E-25 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 XFUD_04425 31df5752ab3d9ae61f475a1499e66790 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 261 1.1E-107 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 XFUD_07315 994ca683a2f4e1b44d6e62740fc6df6b 110 SUPERFAMILY SSF47413 54 102 1.66E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_07315 994ca683a2f4e1b44d6e62740fc6df6b 110 Gene3D G3DSA:1.10.260.40 29 108 6.9E-13 T 11-10-2018 XFUD_07315 994ca683a2f4e1b44d6e62740fc6df6b 110 SMART SM00530 56 109 0.0082 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_11345 56e8b359faf528039f4443ce67978a10 433 Gene3D G3DSA:3.30.1360.180 253 355 4.2E-119 T 11-10-2018 XFUD_11345 56e8b359faf528039f4443ce67978a10 433 Gene3D G3DSA:3.40.720.10 40 406 4.2E-119 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XFUD_11345 56e8b359faf528039f4443ce67978a10 433 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 40 353 4.5E-72 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 XFUD_11345 56e8b359faf528039f4443ce67978a10 433 SUPERFAMILY SSF53649 27 398 9.49E-82 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 XFUD_08315 33eafb5ae89871cf29418597239a6e00 196 Pfam PF03358 NADPH-dependent FMN reductase 1 147 5.3E-17 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 XFUD_08315 33eafb5ae89871cf29418597239a6e00 196 SUPERFAMILY SSF52218 1 183 4.19E-27 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFUD_08315 33eafb5ae89871cf29418597239a6e00 196 Gene3D G3DSA:3.40.50.360 1 192 5.9E-24 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFUD_05570 ee65f3ba2c9860fd2196e40280a5bf70 238 Gene3D G3DSA:3.30.750.120 8 122 4.5E-9 T 11-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily XFUD_05570 ee65f3ba2c9860fd2196e40280a5bf70 238 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 8 111 2.6E-26 T 11-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 XFUD_05570 ee65f3ba2c9860fd2196e40280a5bf70 238 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 12 237 1.7E-86 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 XFUD_05570 ee65f3ba2c9860fd2196e40280a5bf70 238 SUPERFAMILY SSF63848 134 237 1.03E-29 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 XFUD_05570 ee65f3ba2c9860fd2196e40280a5bf70 238 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 11 238 26.315 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 XFUD_05570 ee65f3ba2c9860fd2196e40280a5bf70 238 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 136 234 7.3E-31 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 XFUD_05570 ee65f3ba2c9860fd2196e40280a5bf70 238 Gene3D G3DSA:2.160.20.70 130 238 3.9E-30 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 XFUD_04065 32a524665a105476bd991537403af3a9 181 Pfam PF03477 ATP cone domain 50 136 9.3E-12 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 XFUD_04065 32a524665a105476bd991537403af3a9 181 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.5E-55 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 XFUD_04065 32a524665a105476bd991537403af3a9 181 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 156 78.609 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 XFUD_03960 084f0ad2831f127f78d195ee3a1cc3e6 157 Hamap MF_00598 Protein Smg [smg]. 5 157 28.704 T 11-10-2018 IPR007456 Smg XFUD_03960 084f0ad2831f127f78d195ee3a1cc3e6 157 Pfam PF04361 Protein of unknown function (DUF494) 6 157 1.6E-53 T 11-10-2018 IPR007456 Smg XFUD_11530 21276a165078d0a8a3c2394c4110fdf2 192 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 XFUD_11530 21276a165078d0a8a3c2394c4110fdf2 192 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 189 3.1E-56 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 XFUD_11530 21276a165078d0a8a3c2394c4110fdf2 192 Gene3D G3DSA:3.40.50.1470 2 192 1.1E-59 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 XFUD_11530 21276a165078d0a8a3c2394c4110fdf2 192 SUPERFAMILY SSF53178 5 189 1.57E-64 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 XFUD_11530 21276a165078d0a8a3c2394c4110fdf2 192 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 33.995 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 XFUD_11530 21276a165078d0a8a3c2394c4110fdf2 192 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 4.0E-50 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 XFUD_02270 a459832f7052d2943bbbcee85f414779 347 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 205 273 2.1E-6 T 11-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal XFUD_02270 a459832f7052d2943bbbcee85f414779 347 Pfam PF01385 Probable transposase 120 234 9.2E-22 T 11-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 XFUD_02270 a459832f7052d2943bbbcee85f414779 347 Pfam PF07282 Putative transposase DNA-binding domain 248 317 9.7E-23 T 11-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal XFUD_05480 6120a0e807c5fbfbbf035ecf741881ac 213 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 32 192 1.2E-33 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component XFUD_05480 6120a0e807c5fbfbbf035ecf741881ac 213 Gene3D G3DSA:3.40.50.10610 20 210 2.4E-65 T 11-10-2018 XFUD_05480 6120a0e807c5fbfbbf035ecf741881ac 213 SUPERFAMILY SSF159594 30 200 1.44E-44 T 11-10-2018 XFUD_08785 afbde4434aaca7d9f00ef0d168670141 185 SUPERFAMILY SSF46689 138 181 1.03E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFUD_08785 afbde4434aaca7d9f00ef0d168670141 185 SMART SM00857 2 136 1.6E-57 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 XFUD_08785 afbde4434aaca7d9f00ef0d168670141 185 SUPERFAMILY SSF53041 1 135 1.06E-44 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 XFUD_08785 afbde4434aaca7d9f00ef0d168670141 185 Pfam PF02796 Helix-turn-helix domain of resolvase 138 179 7.2E-7 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 XFUD_08785 afbde4434aaca7d9f00ef0d168670141 185 Gene3D G3DSA:1.10.10.60 138 184 2.9E-7 T 11-10-2018 XFUD_08785 afbde4434aaca7d9f00ef0d168670141 185 Pfam PF00239 Resolvase, N terminal domain 3 135 6.5E-46 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 XFUD_08785 afbde4434aaca7d9f00ef0d168670141 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 XFUD_08785 afbde4434aaca7d9f00ef0d168670141 185 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 XFUD_08785 afbde4434aaca7d9f00ef0d168670141 185 Gene3D G3DSA:3.40.50.1390 1 125 4.7E-52 T 11-10-2018 XFUD_11775 d7788bc14c6d9088441ec120a33e3b87 284 SUPERFAMILY SSF51735 13 168 2.45E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_11775 d7788bc14c6d9088441ec120a33e3b87 284 PIRSF PIRSF000193 10 278 1.1E-72 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XFUD_11775 d7788bc14c6d9088441ec120a33e3b87 284 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 11 275 25.938 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XFUD_11775 d7788bc14c6d9088441ec120a33e3b87 284 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 13 107 1.9E-15 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal XFUD_11775 d7788bc14c6d9088441ec120a33e3b87 284 Gene3D G3DSA:3.40.50.720 11 172 6.9E-46 T 11-10-2018 XFUD_11775 d7788bc14c6d9088441ec120a33e3b87 284 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 171 275 1.4E-33 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XFUD_11775 d7788bc14c6d9088441ec120a33e3b87 284 Gene3D G3DSA:1.10.3730.10 173 279 1.8E-37 T 11-10-2018 XFUD_11775 d7788bc14c6d9088441ec120a33e3b87 284 SUPERFAMILY SSF48179 170 277 7.31E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XFUD_11775 d7788bc14c6d9088441ec120a33e3b87 284 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 13 275 9.7E-88 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 XFUD_10760 67b439b48df007c5240eb72062ed2c4a 360 Pfam PF05954 Phage late control gene D protein (GPD) 36 320 1.1E-30 T 11-10-2018 XFUD_10760 67b439b48df007c5240eb72062ed2c4a 360 SUPERFAMILY SSF69279 5 186 9.07E-13 T 11-10-2018 XFUD_10350 2991f726b49c73ba39e6a54d4d251ef3 349 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 178 205 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XFUD_10350 2991f726b49c73ba39e6a54d4d251ef3 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XFUD_10350 2991f726b49c73ba39e6a54d4d251ef3 349 SUPERFAMILY SSF50129 8 171 4.72E-47 T 11-10-2018 IPR011032 GroES-like superfamily XFUD_10350 2991f726b49c73ba39e6a54d4d251ef3 349 SUPERFAMILY SSF51735 151 312 1.18E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_10350 2991f726b49c73ba39e6a54d4d251ef3 349 Gene3D G3DSA:3.90.180.10 13 342 1.6E-131 T 11-10-2018 XFUD_10350 2991f726b49c73ba39e6a54d4d251ef3 349 Pfam PF00107 Zinc-binding dehydrogenase 185 308 9.1E-26 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XFUD_10350 2991f726b49c73ba39e6a54d4d251ef3 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 142 1.3E-25 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XFUD_10350 2991f726b49c73ba39e6a54d4d251ef3 349 Gene3D G3DSA:3.40.50.720 159 314 1.6E-131 T 11-10-2018 XFUD_10350 2991f726b49c73ba39e6a54d4d251ef3 349 SMART SM00829 13 342 3.8E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XFUD_11455 febf756401d260e3bd1d9fd4fe11d03e 124 Gene3D G3DSA:2.40.50.140 1 124 4.6E-61 T 11-10-2018 XFUD_11455 febf756401d260e3bd1d9fd4fe11d03e 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 6.5E-68 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11455 febf756401d260e3bd1d9fd4fe11d03e 124 SUPERFAMILY SSF50249 3 123 1.71E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_11455 febf756401d260e3bd1d9fd4fe11d03e 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.451 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11455 febf756401d260e3bd1d9fd4fe11d03e 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.2E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11455 febf756401d260e3bd1d9fd4fe11d03e 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.2E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11455 febf756401d260e3bd1d9fd4fe11d03e 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.2E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11455 febf756401d260e3bd1d9fd4fe11d03e 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.2E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11455 febf756401d260e3bd1d9fd4fe11d03e 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.2E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11455 febf756401d260e3bd1d9fd4fe11d03e 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.2E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11455 febf756401d260e3bd1d9fd4fe11d03e 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 3.4E-40 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11455 febf756401d260e3bd1d9fd4fe11d03e 124 PIRSF PIRSF002133 1 124 1.1E-53 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11455 febf756401d260e3bd1d9fd4fe11d03e 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_06845 673272656b18328b2ce08228c6dc3091 401 SUPERFAMILY SSF48208 11 395 2.24E-115 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 XFUD_06845 673272656b18328b2ce08228c6dc3091 401 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 39 389 1.5E-117 T 11-10-2018 XFUD_06845 673272656b18328b2ce08228c6dc3091 401 Gene3D G3DSA:1.50.10.10 9 401 3.1E-168 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 XFUD_07320 9917cc5a891632c66d6c66eac82d44fb 114 Pfam PF01042 Endoribonuclease L-PSP 10 113 1.9E-22 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 XFUD_07320 9917cc5a891632c66d6c66eac82d44fb 114 Gene3D G3DSA:3.30.1330.40 1 114 3.6E-37 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XFUD_07320 9917cc5a891632c66d6c66eac82d44fb 114 SUPERFAMILY SSF55298 3 114 2.83E-28 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 976 1097 6.41E-9 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 1598 1709 9.29E-11 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 1471 1585 1.83E-10 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 753 874 6.8E-9 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.1300.30 1982 2059 3.0E-28 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 530 651 5.62E-9 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 496 523 9.29E-5 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1688 1727 8.6E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1393 1433 1.2E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1170 1210 1.2E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1562 1602 1.5E-13 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 501 541 8.8E-11 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 947 987 1.2E-10 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 627 665 1.8E-9 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 724 764 8.8E-11 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 404 442 3.2E-9 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1073 1111 3.2E-9 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1944 1976 1.1E-9 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1296 1334 3.2E-9 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 850 888 1.8E-9 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 279 319 7.5E-6 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1830 1865 8.7E-7 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 1735 1853 3.53E-15 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 942 969 7.45E-5 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05658 Head domain of trimeric autotransporter adhesin 162 188 6.0E-5 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1888 1912 2.1E-5 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1766 1792 8.8E-7 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Pfam PF03895 YadA-like membrane anchor domain 1999 2059 1.9E-16 T 11-10-2018 IPR005594 YadA-like, C-terminal XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.150.10.10 1875 1974 1.2E-26 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 113 300 6.41E-14 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.390.90 1260 1300 1.2E-11 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.390.90 369 408 1.2E-10 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.390.90 1655 1692 8.4E-12 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.390.90 1037 1077 1.2E-11 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.390.90 814 854 3.4E-11 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.390.90 1523 1567 1.3E-7 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:3.30.390.90 591 631 3.4E-11 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:1.20.5.170 1301 1344 1.5E-7 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:1.20.5.170 632 674 3.5E-7 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:1.20.5.170 1078 1121 1.5E-7 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:1.20.5.170 855 898 4.0E-7 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:1.20.5.170 409 452 1.5E-7 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF54523 1955 2059 1.18E-22 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 307 428 6.28E-11 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 1886 1965 6.54E-23 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.150.10.10 101 299 1.2E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 719 746 7.72E-5 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 1165 1192 7.45E-5 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 1380 1415 7.45E-5 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 SUPERFAMILY SSF101967 1199 1320 6.41E-9 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.20.25.490 1580 1639 5.2E-16 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.20.25.490 965 1024 9.6E-17 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.20.25.490 1188 1247 9.6E-17 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.20.25.490 519 578 2.3E-16 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.20.25.490 742 801 2.3E-16 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.20.25.490 300 355 2.6E-16 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.20.25.490 1411 1470 7.3E-17 T 11-10-2018 XFUD_06465 6f0a26377c022d75ddba5b024275335f 2059 Gene3D G3DSA:2.150.10.10 1728 1874 1.5E-24 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_11325 544faf769792b3ccc4fc9e14d519989c 101 Pfam PF00462 Glutaredoxin 16 75 2.5E-16 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 XFUD_11325 544faf769792b3ccc4fc9e14d519989c 101 SUPERFAMILY SSF52833 6 96 6.07E-27 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_11325 544faf769792b3ccc4fc9e14d519989c 101 ProSitePatterns PS00195 Glutaredoxin active site. 18 34 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 XFUD_11325 544faf769792b3ccc4fc9e14d519989c 101 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 16 94 1.3E-33 T 11-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 XFUD_11325 544faf769792b3ccc4fc9e14d519989c 101 Gene3D G3DSA:3.40.30.10 14 100 4.5E-26 T 11-10-2018 XFUD_11325 544faf769792b3ccc4fc9e14d519989c 101 PRINTS PR00160 Glutaredoxin signature 72 85 3.6E-12 T 11-10-2018 IPR014025 Glutaredoxin subgroup XFUD_11325 544faf769792b3ccc4fc9e14d519989c 101 PRINTS PR00160 Glutaredoxin signature 16 34 3.6E-12 T 11-10-2018 IPR014025 Glutaredoxin subgroup XFUD_11325 544faf769792b3ccc4fc9e14d519989c 101 PRINTS PR00160 Glutaredoxin signature 58 71 3.6E-12 T 11-10-2018 IPR014025 Glutaredoxin subgroup XFUD_07455 304471ea7f8528e5debb87a317b6b927 385 SUPERFAMILY SSF56281 107 355 2.49E-34 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFUD_07455 304471ea7f8528e5debb87a317b6b927 385 Gene3D G3DSA:3.60.15.10 42 344 2.8E-72 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFUD_07455 304471ea7f8528e5debb87a317b6b927 385 Pfam PF12706 Beta-lactamase superfamily domain 123 317 7.2E-44 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFUD_08455 10f9bceb6bcce76f65784d0138d3be7e 156 SUPERFAMILY SSF50341 5 113 1.83E-9 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 XFUD_08455 10f9bceb6bcce76f65784d0138d3be7e 156 Pfam PF01584 CheW-like domain 11 145 2.5E-10 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XFUD_09580 098e98fbc9a805a2501b057596b00a9e 130 Pfam PF04591 Protein of unknown function, DUF596 56 124 1.2E-23 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFUD_09580 098e98fbc9a805a2501b057596b00a9e 130 SUPERFAMILY SSF160472 1 117 1.09E-33 T 11-10-2018 IPR023138 NMB0513-like superfamily XFUD_09580 098e98fbc9a805a2501b057596b00a9e 130 Gene3D G3DSA:1.10.3510.10 4 123 8.3E-14 T 11-10-2018 IPR023138 NMB0513-like superfamily XFUD_03360 e9ceb9810ce18676bc8bddf35575e1d9 328 SUPERFAMILY SSF81799 123 227 4.45E-33 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 XFUD_03360 e9ceb9810ce18676bc8bddf35575e1d9 328 PIRSF PIRSF004486 13 322 3.4E-95 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XFUD_03360 e9ceb9810ce18676bc8bddf35575e1d9 328 SUPERFAMILY SSF53335 18 321 2.37E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_03360 e9ceb9810ce18676bc8bddf35575e1d9 328 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 16 320 5.0E-99 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XFUD_03360 e9ceb9810ce18676bc8bddf35575e1d9 328 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 18 321 36.815 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XFUD_03360 e9ceb9810ce18676bc8bddf35575e1d9 328 Gene3D G3DSA:3.40.50.150 21 320 9.4E-95 T 11-10-2018 XFUD_03360 e9ceb9810ce18676bc8bddf35575e1d9 328 Pfam PF01795 MraW methylase family 16 320 8.3E-97 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 XFUD_03360 e9ceb9810ce18676bc8bddf35575e1d9 328 Gene3D G3DSA:1.10.150.170 121 228 9.4E-95 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 XFUD_09100 20b1e3174b0abc8ec48c5b809ad194f9 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 368 2.9E-78 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XFUD_09100 20b1e3174b0abc8ec48c5b809ad194f9 396 Gene3D G3DSA:2.40.420.20 299 365 2.2E-101 T 11-10-2018 XFUD_09100 20b1e3174b0abc8ec48c5b809ad194f9 396 Gene3D G3DSA:2.40.50.100 58 202 2.2E-101 T 11-10-2018 XFUD_09100 20b1e3174b0abc8ec48c5b809ad194f9 396 Gene3D G3DSA:1.10.287.470 93 166 2.2E-101 T 11-10-2018 XFUD_09100 20b1e3174b0abc8ec48c5b809ad194f9 396 SUPERFAMILY SSF111369 47 292 3.66E-75 T 11-10-2018 XFUD_09100 20b1e3174b0abc8ec48c5b809ad194f9 396 Gene3D G3DSA:2.40.30.170 45 298 2.2E-101 T 11-10-2018 XFUD_09100 20b1e3174b0abc8ec48c5b809ad194f9 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 288 1.6E-15 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain XFUD_02810 eff2988a8d68da99efd9106f195987d9 452 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 97 443 1.3E-126 T 11-10-2018 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I XFUD_02810 eff2988a8d68da99efd9106f195987d9 452 PRINTS PR00095 Anthranilate synthase component I signature 289 302 2.8E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_02810 eff2988a8d68da99efd9106f195987d9 452 PRINTS PR00095 Anthranilate synthase component I signature 383 397 2.8E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_02810 eff2988a8d68da99efd9106f195987d9 452 PRINTS PR00095 Anthranilate synthase component I signature 303 316 2.8E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_02810 eff2988a8d68da99efd9106f195987d9 452 PRINTS PR00095 Anthranilate synthase component I signature 398 412 2.8E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_02810 eff2988a8d68da99efd9106f195987d9 452 Gene3D G3DSA:3.60.120.10 1 451 3.9E-153 T 11-10-2018 IPR005801 ADC synthase GO:0009058 XFUD_02810 eff2988a8d68da99efd9106f195987d9 452 Pfam PF00425 chorismate binding enzyme 189 441 1.1E-87 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal XFUD_02810 eff2988a8d68da99efd9106f195987d9 452 Pfam PF04715 Anthranilate synthase component I, N terminal region 16 141 2.1E-4 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_02810 eff2988a8d68da99efd9106f195987d9 452 SUPERFAMILY SSF56322 5 449 3.27E-120 T 11-10-2018 IPR005801 ADC synthase GO:0009058 XFUD_05150 6655147af065cee56005bc0212fe34dd 164 PIRSF PIRSF001467 2 154 2.7E-54 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 XFUD_05150 6655147af065cee56005bc0212fe34dd 164 SUPERFAMILY SSF50891 4 136 1.13E-56 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily XFUD_05150 6655147af065cee56005bc0212fe34dd 164 Gene3D G3DSA:2.40.100.10 3 144 9.1E-60 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily XFUD_05150 6655147af065cee56005bc0212fe34dd 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 7 134 3.1E-49 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XFUD_05150 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 1.2E-35 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XFUD_05150 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 98 1.2E-35 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XFUD_05150 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 111 126 1.2E-35 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XFUD_05150 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 56 1.2E-35 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XFUD_05150 6655147af065cee56005bc0212fe34dd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 110 1.2E-35 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 XFUD_05150 6655147af065cee56005bc0212fe34dd 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 39 56 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 XFUD_01085 f3bc807fe0a81f3ff71b82fd3d293b37 316 Gene3D G3DSA:3.40.50.1220 190 316 8.2E-54 T 11-10-2018 XFUD_01085 f3bc807fe0a81f3ff71b82fd3d293b37 316 Pfam PF01012 Electron transfer flavoprotein domain 5 174 2.2E-31 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 XFUD_01085 f3bc807fe0a81f3ff71b82fd3d293b37 316 PIRSF PIRSF000089 1 316 2.5E-107 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 XFUD_01085 f3bc807fe0a81f3ff71b82fd3d293b37 316 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 258 284 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 XFUD_01085 f3bc807fe0a81f3ff71b82fd3d293b37 316 SMART SM00893 4 187 1.0E-29 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 XFUD_01085 f3bc807fe0a81f3ff71b82fd3d293b37 316 SUPERFAMILY SSF52402 4 184 4.05E-40 T 11-10-2018 XFUD_01085 f3bc807fe0a81f3ff71b82fd3d293b37 316 SUPERFAMILY SSF52467 194 310 1.26E-46 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily XFUD_01085 f3bc807fe0a81f3ff71b82fd3d293b37 316 Gene3D G3DSA:3.40.50.620 4 187 9.8E-41 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_01085 f3bc807fe0a81f3ff71b82fd3d293b37 316 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 195 277 1.7E-35 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 XFUD_06505 c457b2b25df163f517abe15be89261e7 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 XFUD_06505 c457b2b25df163f517abe15be89261e7 142 PIRSF PIRSF002181 1 142 3.8E-48 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 XFUD_06505 c457b2b25df163f517abe15be89261e7 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 3 142 1.9E-59 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_06505 c457b2b25df163f517abe15be89261e7 142 SUPERFAMILY SSF52161 1 140 1.83E-56 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 XFUD_06505 c457b2b25df163f517abe15be89261e7 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.209 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 XFUD_06505 c457b2b25df163f517abe15be89261e7 142 Gene3D G3DSA:3.90.1180.10 1 142 1.8E-59 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 XFUD_06505 c457b2b25df163f517abe15be89261e7 142 Pfam PF00572 Ribosomal protein L13 15 138 1.2E-51 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 XFUD_01625 350fa848db5ca90b60c218cc810c9dad 340 Gene3D G3DSA:1.20.120.1460 262 335 3.5E-16 T 11-10-2018 XFUD_01625 350fa848db5ca90b60c218cc810c9dad 340 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 99 117 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 XFUD_01625 350fa848db5ca90b60c218cc810c9dad 340 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 12 332 47.216 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 XFUD_01625 350fa848db5ca90b60c218cc810c9dad 340 Pfam PF01207 Dihydrouridine synthase (Dus) 20 323 5.4E-71 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 XFUD_01625 350fa848db5ca90b60c218cc810c9dad 340 SUPERFAMILY SSF51395 17 311 4.58E-63 T 11-10-2018 XFUD_01625 350fa848db5ca90b60c218cc810c9dad 340 Gene3D G3DSA:3.20.20.70 15 255 2.4E-67 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_01625 350fa848db5ca90b60c218cc810c9dad 340 PIRSF PIRSF006621 5 340 2.2E-78 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 XFUD_05760 d51dbf89efd7db06d444d041e4d82d50 372 PIRSF PIRSF001456 3 361 5.4E-131 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFUD_05760 d51dbf89efd7db06d444d041e4d82d50 372 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 35.248 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFUD_05760 d51dbf89efd7db06d444d041e4d82d50 372 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFUD_05760 d51dbf89efd7db06d444d041e4d82d50 372 SUPERFAMILY SSF103263 4 351 1.22E-140 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFUD_05760 d51dbf89efd7db06d444d041e4d82d50 372 Gene3D G3DSA:3.60.150.10 1 362 2.5E-145 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFUD_05760 d51dbf89efd7db06d444d041e4d82d50 372 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFUD_05760 d51dbf89efd7db06d444d041e4d82d50 372 Pfam PF01264 Chorismate synthase 11 345 2.7E-130 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFUD_05760 d51dbf89efd7db06d444d041e4d82d50 372 TIGRFAM TIGR00033 aroC: chorismate synthase 11 350 2.5E-134 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFUD_05760 d51dbf89efd7db06d444d041e4d82d50 372 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 XFUD_11175 f5fe791025056e173441118880554e07 1167 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1157 0.0 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 XFUD_11175 f5fe791025056e173441118880554e07 1167 Gene3D G3DSA:3.40.50.300 933 1167 3.5E-45 T 11-10-2018 XFUD_11175 f5fe791025056e173441118880554e07 1167 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1159 22.38 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 XFUD_11175 f5fe791025056e173441118880554e07 1167 SMART SM00968 521 619 4.4E-7 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 XFUD_11175 f5fe791025056e173441118880554e07 1167 Pfam PF06470 SMC proteins Flexible Hinge Domain 526 592 7.0E-5 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 XFUD_11175 f5fe791025056e173441118880554e07 1167 SUPERFAMILY SSF52540 1 1159 1.12E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11175 f5fe791025056e173441118880554e07 1167 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1150 1.8E-67 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal XFUD_11175 f5fe791025056e173441118880554e07 1167 PIRSF PIRSF005719 1 1164 1.4E-263 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein XFUD_11175 f5fe791025056e173441118880554e07 1167 Gene3D G3DSA:3.40.50.300 1 244 1.1E-53 T 11-10-2018 XFUD_11175 f5fe791025056e173441118880554e07 1167 SUPERFAMILY SSF75553 488 667 5.75E-6 T 11-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 Gene3D G3DSA:3.40.120.10 1 147 2.4E-53 T 11-10-2018 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 Gene3D G3DSA:3.40.120.10 170 247 7.7E-30 T 11-10-2018 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 SUPERFAMILY SSF55957 366 449 1.01E-18 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 366 2.3E-22 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 Gene3D G3DSA:3.40.120.10 248 366 3.1E-34 T 11-10-2018 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 2.8E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 2.8E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 231 246 2.8E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 202 215 2.8E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 SUPERFAMILY SSF53738 256 360 1.88E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 371 447 1.0E-11 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 251 7.1E-23 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 Gene3D G3DSA:3.30.310.50 367 449 2.8E-27 T 11-10-2018 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 129 3.4E-34 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 SUPERFAMILY SSF53738 151 254 3.85E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_01120 2c5e00bcac45a80c781b77b0d8c26b30 449 SUPERFAMILY SSF53738 4 175 4.12E-35 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 SMART SM00436 131 226 2.0E-20 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 Pfam PF01751 Toprim domain 3 138 1.2E-17 T 11-10-2018 IPR006171 TOPRIM domain XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 Gene3D G3DSA:1.10.290.10 290 419 8.7E-151 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 Gene3D G3DSA:2.70.20.10 220 497 8.7E-151 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 SMART SM00493 1 131 8.7E-24 T 11-10-2018 IPR006171 TOPRIM domain XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 Pfam PF01131 DNA topoisomerase 158 601 6.3E-106 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 668 3.0E-202 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 SMART SM00437 281 567 1.1E-66 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 SUPERFAMILY SSF57783 625 670 9.69E-5 T 11-10-2018 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 318 333 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 SUPERFAMILY SSF56712 1 615 1.31E-169 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 Gene3D G3DSA:1.10.460.10 165 611 8.7E-151 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 Gene3D G3DSA:3.40.50.140 1 159 4.4E-53 T 11-10-2018 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 405 421 9.1E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 324 333 9.1E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 530 544 9.1E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 105 118 9.1E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_08945 e9607565f8bd9a31593b7d8abed128a4 685 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 196 214 9.1E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_06960 6ea253ec5c942d000643cb19bf07f5c5 863 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 544 831 9.6E-89 T 11-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal XFUD_06960 6ea253ec5c942d000643cb19bf07f5c5 863 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 23 304 4.9E-10 T 11-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD XFUD_06960 6ea253ec5c942d000643cb19bf07f5c5 863 SUPERFAMILY SSF55729 647 829 3.71E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 SUPERFAMILY SSF103491 14 430 1.02E-117 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 434 1.0E-116 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 439 27.06 T 11-10-2018 IPR026593 Protein translocase subunit SecY XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-87 T 11-10-2018 XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-87 T 11-10-2018 XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 408 426 1.9E-87 T 11-10-2018 XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 321 343 1.9E-87 T 11-10-2018 XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 1.9E-87 T 11-10-2018 XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 274 293 1.9E-87 T 11-10-2018 XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 376 394 1.9E-87 T 11-10-2018 XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 1.9E-87 T 11-10-2018 XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-87 T 11-10-2018 XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 PIRSF PIRSF004557 11 445 7.6E-111 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 Pfam PF00344 SecY translocase 76 422 2.7E-104 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFUD_04965 bd363498a0e9d61a50633ec3dac2c7ad 457 Gene3D G3DSA:1.10.3370.10 11 435 7.8E-146 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFUD_02620 faabfc39d2030cd79ad5a1ac8d1187dd 158 PIRSF PIRSF028570 1 158 6.8E-70 T 11-10-2018 IPR016891 Protein of unknown function DUF2321 XFUD_02620 faabfc39d2030cd79ad5a1ac8d1187dd 158 Pfam PF10083 Uncharacterized protein conserved in bacteria (DUF2321) 3 158 3.6E-65 T 11-10-2018 IPR016891 Protein of unknown function DUF2321 XFUD_09260 7fa477abb08b2dadc077b0474ff09515 645 SUPERFAMILY SSF52540 347 530 3.7E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_09260 7fa477abb08b2dadc077b0474ff09515 645 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_09260 7fa477abb08b2dadc077b0474ff09515 645 Pfam PF12848 ABC transporter 217 293 5.7E-24 T 11-10-2018 IPR032781 ABC-transporter extension domain XFUD_09260 7fa477abb08b2dadc077b0474ff09515 645 SUPERFAMILY SSF52540 2 238 3.58E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_09260 7fa477abb08b2dadc077b0474ff09515 645 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_09260 7fa477abb08b2dadc077b0474ff09515 645 SMART SM00382 26 223 7.9E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_09260 7fa477abb08b2dadc077b0474ff09515 645 SMART SM00382 359 524 2.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_09260 7fa477abb08b2dadc077b0474ff09515 645 Gene3D G3DSA:3.40.50.300 1 259 5.1E-60 T 11-10-2018 XFUD_09260 7fa477abb08b2dadc077b0474ff09515 645 Gene3D G3DSA:3.40.50.300 275 562 5.3E-46 T 11-10-2018 XFUD_09260 7fa477abb08b2dadc077b0474ff09515 645 Pfam PF00005 ABC transporter 17 178 2.6E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_09260 7fa477abb08b2dadc077b0474ff09515 645 Pfam PF00005 ABC transporter 350 481 1.5E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_03890 cb334ca3b5deba6e73151b7589be4687 210 SUPERFAMILY SSF50022 35 199 2.81E-37 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 XFUD_03890 cb334ca3b5deba6e73151b7589be4687 210 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 9 44 1.4E-8 T 11-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 XFUD_03890 cb334ca3b5deba6e73151b7589be4687 210 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 13 198 7.9E-66 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 XFUD_03890 cb334ca3b5deba6e73151b7589be4687 210 Pfam PF00355 Rieske [2Fe-2S] domain 105 182 4.7E-10 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 XFUD_03890 cb334ca3b5deba6e73151b7589be4687 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 157 169 2.4E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 XFUD_03890 cb334ca3b5deba6e73151b7589be4687 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 126 137 2.4E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 XFUD_03890 cb334ca3b5deba6e73151b7589be4687 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 170 182 2.4E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 XFUD_03890 cb334ca3b5deba6e73151b7589be4687 210 Gene3D G3DSA:2.102.10.10 47 198 5.9E-39 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 XFUD_10170 58e56ee28c57499167c26984415059b8 172 Gene3D G3DSA:2.30.22.10 114 170 2.6E-22 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 XFUD_10170 58e56ee28c57499167c26984415059b8 172 SUPERFAMILY SSF51064 117 171 2.88E-18 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 XFUD_10170 58e56ee28c57499167c26984415059b8 172 SUPERFAMILY SSF58014 20 114 1.96E-21 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 XFUD_10170 58e56ee28c57499167c26984415059b8 172 PRINTS PR00773 GrpE protein signature 122 137 2.9E-23 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XFUD_10170 58e56ee28c57499167c26984415059b8 172 PRINTS PR00773 GrpE protein signature 149 168 2.9E-23 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XFUD_10170 58e56ee28c57499167c26984415059b8 172 PRINTS PR00773 GrpE protein signature 42 58 2.9E-23 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XFUD_10170 58e56ee28c57499167c26984415059b8 172 PRINTS PR00773 GrpE protein signature 70 85 2.9E-23 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XFUD_10170 58e56ee28c57499167c26984415059b8 172 Hamap MF_01151 Protein GrpE [grpE]. 3 170 19.169 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XFUD_10170 58e56ee28c57499167c26984415059b8 172 Pfam PF01025 GrpE 11 170 1.4E-45 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XFUD_10170 58e56ee28c57499167c26984415059b8 172 Gene3D G3DSA:3.90.20.20 2 111 1.5E-22 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 XFUD_10170 58e56ee28c57499167c26984415059b8 172 ProSitePatterns PS01071 grpE protein signature. 125 168 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 XFUD_06280 ccb254fe8394bbfb2edf377f4a2308de 204 SUPERFAMILY SSF52833 63 196 8.41E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_06280 ccb254fe8394bbfb2edf377f4a2308de 204 Gene3D G3DSA:3.40.30.10 70 200 8.2E-20 T 11-10-2018 XFUD_06280 ccb254fe8394bbfb2edf377f4a2308de 204 Pfam PF13899 Thioredoxin-like 83 168 1.5E-12 T 11-10-2018 XFUD_11560 0cc9de0ee924633b816e0b88b77a09a3 559 SUPERFAMILY SSF48452 205 363 1.09E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_11560 0cc9de0ee924633b816e0b88b77a09a3 559 Gene3D G3DSA:1.25.40.10 376 556 2.3E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_11560 0cc9de0ee924633b816e0b88b77a09a3 559 SUPERFAMILY SSF48452 379 549 5.63E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_11560 0cc9de0ee924633b816e0b88b77a09a3 559 SMART SM00028 412 445 2.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_11560 0cc9de0ee924633b816e0b88b77a09a3 559 SMART SM00028 446 480 220.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_11560 0cc9de0ee924633b816e0b88b77a09a3 559 SMART SM00028 514 547 2.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_11560 0cc9de0ee924633b816e0b88b77a09a3 559 Pfam PF13432 Tetratricopeptide repeat 462 504 0.014 T 11-10-2018 XFUD_11560 0cc9de0ee924633b816e0b88b77a09a3 559 Pfam PF13432 Tetratricopeptide repeat 385 445 0.011 T 11-10-2018 XFUD_05935 4614f1bd71492631b758d052b825fcbc 189 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 11 184 3.4E-43 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related XFUD_05935 4614f1bd71492631b758d052b825fcbc 189 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 186 20.51 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 XFUD_05935 4614f1bd71492631b758d052b825fcbc 189 Gene3D G3DSA:2.60.450.10 60 188 1.3E-13 T 11-10-2018 XFUD_05935 4614f1bd71492631b758d052b825fcbc 189 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 9 183 9.0E-43 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 XFUD_08815 5cd6dd38b068d10eb1ab0c891500cb56 458 Gene3D G3DSA:3.30.559.10 238 448 3.5E-11 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XFUD_08815 5cd6dd38b068d10eb1ab0c891500cb56 458 Gene3D G3DSA:3.30.559.10 5 196 1.5E-13 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XFUD_08815 5cd6dd38b068d10eb1ab0c891500cb56 458 SUPERFAMILY SSF52777 11 177 2.78E-6 T 11-10-2018 XFUD_10285 5e4bec1139ec48725fbd9b05d727cf40 484 Pfam PF13727 CoA-binding domain 77 255 3.7E-29 T 11-10-2018 XFUD_10285 5e4bec1139ec48725fbd9b05d727cf40 484 Pfam PF02397 Bacterial sugar transferase 293 478 2.1E-64 T 11-10-2018 IPR003362 Bacterial sugar transferase XFUD_10285 5e4bec1139ec48725fbd9b05d727cf40 484 Gene3D G3DSA:3.40.50.720 155 278 1.9E-12 T 11-10-2018 XFUD_10285 5e4bec1139ec48725fbd9b05d727cf40 484 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 33 484 3.9E-157 T 11-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 XFUD_10285 5e4bec1139ec48725fbd9b05d727cf40 484 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 33 484 7.4E-139 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase XFUD_05055 0ae240216ae7286ba02d60c612d59ad2 94 Gene3D G3DSA:4.10.520.10 1 93 8.1E-35 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFUD_05055 0ae240216ae7286ba02d60c612d59ad2 94 SUPERFAMILY SSF47729 1 90 6.92E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFUD_05055 0ae240216ae7286ba02d60c612d59ad2 94 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_05055 0ae240216ae7286ba02d60c612d59ad2 94 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_05055 0ae240216ae7286ba02d60c612d59ad2 94 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_05055 0ae240216ae7286ba02d60c612d59ad2 94 SMART SM00411 1 90 4.5E-41 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_05055 0ae240216ae7286ba02d60c612d59ad2 94 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.5E-33 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_01415 67c262cd6439754da0ae5dab7297e07b 346 Pfam PF13531 Bacterial extracellular solute-binding protein 51 294 1.1E-16 T 11-10-2018 XFUD_01415 67c262cd6439754da0ae5dab7297e07b 346 SUPERFAMILY SSF53850 37 306 3.65E-41 T 11-10-2018 XFUD_01415 67c262cd6439754da0ae5dab7297e07b 346 Gene3D G3DSA:3.40.190.10 36 326 3.0E-113 T 11-10-2018 XFUD_01415 67c262cd6439754da0ae5dab7297e07b 346 Gene3D G3DSA:3.40.190.10 134 339 3.0E-113 T 11-10-2018 XFUD_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 Gene3D G3DSA:3.40.50.150 59 285 1.5E-60 T 11-10-2018 XFUD_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 Pfam PF17284 Spermidine synthase tetramerisation domain 7 58 1.2E-10 T 11-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XFUD_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 36.493 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XFUD_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 SUPERFAMILY SSF53335 7 284 3.67E-74 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 Pfam PF01564 Spermine/spermidine synthase domain 63 246 8.7E-52 T 11-10-2018 XFUD_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 Gene3D G3DSA:2.30.140.10 3 58 8.0E-19 T 11-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XFUD_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 83 96 - T 11-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XFUD_00595 a04fb75d396ebb2aa27c4830cd2126f9 285 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 1.3E-79 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 XFUD_11720 b457be071f363237895dcf23de7c19bc 543 Pfam PF00271 Helicase conserved C-terminal domain 244 352 4.3E-27 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_11720 b457be071f363237895dcf23de7c19bc 543 Gene3D G3DSA:3.40.50.300 226 389 1.8E-43 T 11-10-2018 XFUD_11720 b457be071f363237895dcf23de7c19bc 543 SMART SM00487 28 235 3.2E-56 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_11720 b457be071f363237895dcf23de7c19bc 543 Pfam PF12300 ATP-dependent RNA helicase RhlB 377 516 1.2E-6 T 11-10-2018 IPR022077 ATP-dependent RNA helicase RhlB GO:0016817 XFUD_11720 b457be071f363237895dcf23de7c19bc 543 Gene3D G3DSA:3.40.50.300 2 222 1.1E-74 T 11-10-2018 XFUD_11720 b457be071f363237895dcf23de7c19bc 543 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XFUD_11720 b457be071f363237895dcf23de7c19bc 543 SUPERFAMILY SSF52540 84 363 1.29E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11720 b457be071f363237895dcf23de7c19bc 543 SMART SM00490 271 352 4.0E-30 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_11720 b457be071f363237895dcf23de7c19bc 543 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 390 49.9 T 11-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 XFUD_11720 b457be071f363237895dcf23de7c19bc 543 Pfam PF00270 DEAD/DEAH box helicase 33 206 1.1E-46 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFUD_00605 a96ea94deab4901c5bdaaa98d85dadfc 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XFUD_00605 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00605 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00605 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00605 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00605 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00605 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 2.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00605 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 2.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00605 a96ea94deab4901c5bdaaa98d85dadfc 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 2.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00605 a96ea94deab4901c5bdaaa98d85dadfc 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 0.0063 T 11-10-2018 XFUD_00605 a96ea94deab4901c5bdaaa98d85dadfc 251 Gene3D G3DSA:3.40.50.720 2 236 6.2E-60 T 11-10-2018 XFUD_00605 a96ea94deab4901c5bdaaa98d85dadfc 251 SUPERFAMILY SSF51735 3 225 1.47E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_00605 a96ea94deab4901c5bdaaa98d85dadfc 251 Pfam PF00106 short chain dehydrogenase 3 187 6.7E-51 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 482 1.5E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 SMART SM00086 192 234 8.3E-5 T 11-10-2018 IPR001610 PAC motif XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 Gene3D G3DSA:3.30.450.20 4 116 9.9E-12 T 11-10-2018 XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 SUPERFAMILY SSF55785 105 232 1.48E-25 T 11-10-2018 IPR035965 PAS domain superfamily XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 SUPERFAMILY SSF47384 248 324 1.45E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 SUPERFAMILY SSF55874 316 482 2.49E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 SUPERFAMILY SSF55785 23 116 1.45E-7 T 11-10-2018 IPR035965 PAS domain superfamily XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 3.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 463 3.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 438 3.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 3.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 Gene3D G3DSA:1.10.287.130 231 324 7.7E-19 T 11-10-2018 XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 Gene3D G3DSA:3.30.450.20 117 230 6.9E-22 T 11-10-2018 XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 SMART SM00388 261 327 3.9E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 116 239 1.7E-13 T 11-10-2018 IPR000014 PAS domain XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 Pfam PF08448 PAS fold 127 234 1.1E-11 T 11-10-2018 IPR013656 PAS fold-4 XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 SMART SM00387 373 486 2.6E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 Gene3D G3DSA:3.30.565.10 326 485 6.5E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 324 3.0E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_03610 868ab71fbc93eda7d619edcde0bef834 510 SMART SM00091 120 186 0.0047 T 11-10-2018 IPR000014 PAS domain XFUD_04980 407a1a6ca808ab1fa6c42775cbd6e279 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 34.828 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 XFUD_04980 407a1a6ca808ab1fa6c42775cbd6e279 208 Gene3D G3DSA:1.10.1050.10 6 208 8.3E-77 T 11-10-2018 XFUD_04980 407a1a6ca808ab1fa6c42775cbd6e279 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 7.2E-76 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 XFUD_04980 407a1a6ca808ab1fa6c42775cbd6e279 208 SMART SM00363 97 155 1.5E-19 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04980 407a1a6ca808ab1fa6c42775cbd6e279 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 7.3E-31 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 XFUD_04980 407a1a6ca808ab1fa6c42775cbd6e279 208 SMART SM01390 3 96 7.0E-46 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 XFUD_04980 407a1a6ca808ab1fa6c42775cbd6e279 208 SUPERFAMILY SSF55174 2 208 6.54E-66 T 11-10-2018 XFUD_04980 407a1a6ca808ab1fa6c42775cbd6e279 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04980 407a1a6ca808ab1fa6c42775cbd6e279 208 Gene3D G3DSA:3.10.290.10 96 193 8.3E-77 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XFUD_04980 407a1a6ca808ab1fa6c42775cbd6e279 208 Pfam PF01479 S4 domain 98 144 7.3E-21 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_06880 737d33f50c89c08532ebfb3ca30c38ef 634 Pfam PF13632 Glycosyl transferase family group 2 236 476 6.8E-16 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XFUD_06880 737d33f50c89c08532ebfb3ca30c38ef 634 SUPERFAMILY SSF53448 137 423 1.69E-27 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_06880 737d33f50c89c08532ebfb3ca30c38ef 634 Gene3D G3DSA:3.90.550.10 132 364 9.1E-17 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_06880 737d33f50c89c08532ebfb3ca30c38ef 634 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 1 634 46.168 T 11-10-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 XFUD_11535 1f849b7e633c16e021c9876756fde82c 208 Gene3D G3DSA:2.170.120.20 99 195 4.6E-26 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal XFUD_11535 1f849b7e633c16e021c9876756fde82c 208 Pfam PF01386 Ribosomal L25p family 6 94 6.4E-27 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 XFUD_11535 1f849b7e633c16e021c9876756fde82c 208 SUPERFAMILY SSF50715 4 195 2.62E-54 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFUD_11535 1f849b7e633c16e021c9876756fde82c 208 Gene3D G3DSA:2.40.240.10 2 97 3.4E-32 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFUD_11535 1f849b7e633c16e021c9876756fde82c 208 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 178 4.2E-38 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 XFUD_11535 1f849b7e633c16e021c9876756fde82c 208 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 188 30.133 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 XFUD_11535 1f849b7e633c16e021c9876756fde82c 208 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 4 97 23.18 T 11-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 XFUD_11535 1f849b7e633c16e021c9876756fde82c 208 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 186 3.8E-25 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain XFUD_11535 1f849b7e633c16e021c9876756fde82c 208 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 97 9.0E-50 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 XFUD_05445 a43af5378b2b426d96b36527483ce2f3 118 Hamap MF_00599 Cell division protein FtsB [ftsB]. 2 93 32.828 T 11-10-2018 IPR023081 Cell division protein FtsB XFUD_05445 a43af5378b2b426d96b36527483ce2f3 118 Pfam PF04977 Septum formation initiator 14 92 9.6E-29 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 SUPERFAMILY SSF118116 428 617 1.31E-57 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 SUPERFAMILY SSF54211 190 327 1.1E-36 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 307 2.3E-95 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 Pfam PF08676 MutL C terminal dimerisation domain 428 575 3.1E-48 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 SMART SM00853 432 575 2.4E-53 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 Gene3D G3DSA:2.30.42.20 434 612 1.6E-56 T 11-10-2018 XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 Gene3D G3DSA:3.30.565.10 1 202 7.0E-65 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 SUPERFAMILY SSF55874 1 204 2.49E-52 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 Gene3D G3DSA:3.30.1370.100 475 570 1.6E-56 T 11-10-2018 XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 615 28.856 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 SMART SM01340 209 327 1.7E-57 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 Gene3D G3DSA:3.30.230.10 214 326 2.8E-39 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 115 7.1E-11 T 11-10-2018 XFUD_03215 b921c75806c4f505b11ff6aed288ec43 619 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 210 326 1.5E-40 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 XFUD_05800 4c5790b44c970d7d35e41db01e58cdca 321 Pfam PF00296 Luciferase-like monooxygenase 35 255 3.4E-38 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 XFUD_05800 4c5790b44c970d7d35e41db01e58cdca 321 Gene3D G3DSA:3.20.20.30 17 319 4.7E-68 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 XFUD_05800 4c5790b44c970d7d35e41db01e58cdca 321 SUPERFAMILY SSF51679 30 317 2.22E-63 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 XFUD_05045 44530429dec77dac2ddf6cf3e56012a2 426 Pfam PF06689 ClpX C4-type zinc finger 16 53 3.4E-20 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 XFUD_05045 44530429dec77dac2ddf6cf3e56012a2 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 7 417 53.164 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 XFUD_05045 44530429dec77dac2ddf6cf3e56012a2 426 SMART SM00382 113 265 1.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_05045 44530429dec77dac2ddf6cf3e56012a2 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 1.3E-15 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFUD_05045 44530429dec77dac2ddf6cf3e56012a2 426 Gene3D G3DSA:3.30.50.30 6 55 1.6E-24 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily XFUD_05045 44530429dec77dac2ddf6cf3e56012a2 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 14 414 7.6E-204 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 XFUD_05045 44530429dec77dac2ddf6cf3e56012a2 426 Gene3D G3DSA:3.40.50.300 59 317 8.3E-109 T 11-10-2018 XFUD_05045 44530429dec77dac2ddf6cf3e56012a2 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 3.3E-49 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFUD_05045 44530429dec77dac2ddf6cf3e56012a2 426 SUPERFAMILY SSF52540 64 406 2.2E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05045 44530429dec77dac2ddf6cf3e56012a2 426 Gene3D G3DSA:1.10.8.60 318 426 4.2E-40 T 11-10-2018 XFUD_05045 44530429dec77dac2ddf6cf3e56012a2 426 SMART SM01086 319 414 8.0E-31 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFUD_05045 44530429dec77dac2ddf6cf3e56012a2 426 SUPERFAMILY SSF57716 16 51 1.28E-11 T 11-10-2018 XFUD_05045 44530429dec77dac2ddf6cf3e56012a2 426 SMART SM00994 15 54 9.8E-24 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 434 590 2.6E-7 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 174 1.7E-26 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 636 674 3.0E-6 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 SUPERFAMILY SSF50677 229 432 1.57E-49 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 7 878 23.302 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 SUPERFAMILY SSF52374 7 684 1.17E-145 T 11-10-2018 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 Gene3D G3DSA:3.10.330.110 584 646 0.0 T 11-10-2018 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 Gene3D G3DSA:3.10.20.590 817 879 1.3E-20 T 11-10-2018 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 Gene3D G3DSA:3.40.50.620 36 583 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 Pfam PF08264 Anticodon-binding domain of tRNA 720 840 1.2E-14 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 Gene3D G3DSA:3.90.740.10 230 431 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 8 878 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 224 419 3.1E-68 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 SUPERFAMILY SSF47323 681 877 4.11E-31 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 Gene3D G3DSA:1.10.730.10 11 810 0.0 T 11-10-2018 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 541 563 6.6E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 156 172 6.6E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 188 201 6.6E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 130 147 6.6E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 504 522 6.6E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 574 584 6.6E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFUD_09415 a38fce53d3df116d2f4e5af95687205b 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 218 237 6.6E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 XFUD_08220 1fab2ca502a90b4763ebe7638bd80132 141 Gene3D G3DSA:3.30.420.270 55 128 1.1E-12 T 11-10-2018 XFUD_08220 1fab2ca502a90b4763ebe7638bd80132 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 136 4.1E-26 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 XFUD_08220 1fab2ca502a90b4763ebe7638bd80132 141 TIGRFAM TIGR02801 tolR: protein TolR 10 135 3.9E-40 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 XFUD_08220 1fab2ca502a90b4763ebe7638bd80132 141 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 3 135 27.557 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 XFUD_03425 d923bb8bde03d10e36180006bd6ee473 304 Gene3D G3DSA:3.30.1700.10 128 303 2.6E-63 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XFUD_03425 d923bb8bde03d10e36180006bd6ee473 304 Gene3D G3DSA:3.30.230.20 1 127 1.7E-47 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XFUD_03425 d923bb8bde03d10e36180006bd6ee473 304 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3 292 1.4E-114 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XFUD_03425 d923bb8bde03d10e36180006bd6ee473 304 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 46.09 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XFUD_03425 d923bb8bde03d10e36180006bd6ee473 304 SUPERFAMILY SSF54211 3 124 6.83E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_03425 d923bb8bde03d10e36180006bd6ee473 304 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 4.4E-103 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 XFUD_03425 d923bb8bde03d10e36180006bd6ee473 304 SUPERFAMILY SSF54211 134 277 4.63E-49 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_03325 891c147e423d1be5f02595e845f0143d 597 Gene3D G3DSA:2.40.128.130 312 597 1.2E-39 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFUD_03325 891c147e423d1be5f02595e845f0143d 597 PIRSF PIRSF037375 1 597 2.0E-203 T 11-10-2018 IPR017186 Lipase, autotransporter EstA XFUD_03325 891c147e423d1be5f02595e845f0143d 597 SMART SM00869 332 589 1.3E-23 T 11-10-2018 IPR005546 Autotransporter beta-domain XFUD_03325 891c147e423d1be5f02595e845f0143d 597 Pfam PF03797 Autotransporter beta-domain 339 570 2.8E-35 T 11-10-2018 IPR005546 Autotransporter beta-domain XFUD_03325 891c147e423d1be5f02595e845f0143d 597 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 32 290 6.4E-12 T 11-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 XFUD_03325 891c147e423d1be5f02595e845f0143d 597 SUPERFAMILY SSF52266 31 297 7.66E-17 T 11-10-2018 XFUD_03325 891c147e423d1be5f02595e845f0143d 597 Gene3D G3DSA:3.40.50.1110 18 302 4.1E-76 T 11-10-2018 IPR036514 SGNH hydrolase superfamily XFUD_03325 891c147e423d1be5f02595e845f0143d 597 SUPERFAMILY SSF103515 328 592 3.01E-26 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 247 5.4E-41 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 Pfam PF13662 Toprim domain 256 320 1.9E-14 T 11-10-2018 IPR006171 TOPRIM domain XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 SMART SM00766 443 570 1.9E-35 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:3.40.1360.10 237 363 1.2E-41 T 11-10-2018 XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 TIGRFAM TIGR01391 dnaG: DNA primase 3 413 5.5E-139 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 Pfam PF10410 DnaB-helicase binding domain of primase 365 418 2.2E-11 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:3.90.580.10 1 101 1.2E-36 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 Pfam PF01807 CHC2 zinc finger 5 100 1.2E-36 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 SUPERFAMILY SSF117023 440 573 1.11E-28 T 11-10-2018 XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 Hamap MF_00974 DNA primase [dnaG]. 3 571 28.081 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 SMART SM00493 255 326 2.0E-20 T 11-10-2018 IPR006171 TOPRIM domain XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 SUPERFAMILY SSF56731 113 417 6.8E-105 T 11-10-2018 XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:1.20.50.20 364 419 2.7E-13 T 11-10-2018 XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:1.10.860.10 431 576 2.1E-30 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 Gene3D G3DSA:3.90.980.10 108 236 4.2E-39 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 Pfam PF08278 DNA primase DnaG DnaB-binding 446 569 3.1E-24 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 SUPERFAMILY SSF57783 1 99 4.42E-35 T 11-10-2018 XFUD_01790 4e733205ec0475165c78beeab57ba83d 577 SMART SM00400 35 89 1.0E-29 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XFUD_02790 681cc15536af261cba0d2b415d9c5ca3 317 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 12 311 5.9E-34 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain XFUD_02790 681cc15536af261cba0d2b415d9c5ca3 317 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 8 296 2.0E-93 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 XFUD_02790 681cc15536af261cba0d2b415d9c5ca3 317 Gene3D G3DSA:3.30.70.250 130 202 2.2E-93 T 11-10-2018 XFUD_02790 681cc15536af261cba0d2b415d9c5ca3 317 Pfam PF00698 Acyl transferase domain 11 282 9.2E-39 T 11-10-2018 IPR014043 Acyl transferase XFUD_02790 681cc15536af261cba0d2b415d9c5ca3 317 Gene3D G3DSA:3.40.366.10 11 291 2.2E-93 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 XFUD_02790 681cc15536af261cba0d2b415d9c5ca3 317 SUPERFAMILY SSF55048 135 202 1.7E-14 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding XFUD_02790 681cc15536af261cba0d2b415d9c5ca3 317 SUPERFAMILY SSF52151 9 312 1.67E-71 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XFUD_02790 681cc15536af261cba0d2b415d9c5ca3 317 PIRSF PIRSF000446 6 314 4.7E-96 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 XFUD_11625 a98e872be7cc46bf2730cd4f74d2df6e 393 Gene3D G3DSA:3.30.1490.20 103 180 2.9E-26 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XFUD_11625 a98e872be7cc46bf2730cd4f74d2df6e 393 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 351 39.708 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 XFUD_11625 a98e872be7cc46bf2730cd4f74d2df6e 393 SUPERFAMILY SSF52440 3 95 1.18E-19 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XFUD_11625 a98e872be7cc46bf2730cd4f74d2df6e 393 SUPERFAMILY SSF51246 304 368 2.35E-15 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 XFUD_11625 a98e872be7cc46bf2730cd4f74d2df6e 393 Gene3D G3DSA:3.30.470.20 181 372 2.6E-66 T 11-10-2018 XFUD_11625 a98e872be7cc46bf2730cd4f74d2df6e 393 Pfam PF02222 ATP-grasp domain 107 279 3.8E-53 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type XFUD_11625 a98e872be7cc46bf2730cd4f74d2df6e 393 Gene3D G3DSA:3.40.50.20 1 102 3.1E-31 T 11-10-2018 XFUD_11625 a98e872be7cc46bf2730cd4f74d2df6e 393 SUPERFAMILY SSF56059 98 299 3.71E-59 T 11-10-2018 XFUD_11625 a98e872be7cc46bf2730cd4f74d2df6e 393 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 354 5.3E-109 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 XFUD_02755 9e8d06c38ab5dd2d21c6edee658b0b47 291 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 210 222 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site XFUD_02755 9e8d06c38ab5dd2d21c6edee658b0b47 291 SUPERFAMILY SSF48576 5 284 9.71E-82 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily XFUD_02755 9e8d06c38ab5dd2d21c6edee658b0b47 291 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site XFUD_02755 9e8d06c38ab5dd2d21c6edee658b0b47 291 Pfam PF00348 Polyprenyl synthetase 29 255 4.4E-54 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 XFUD_02755 9e8d06c38ab5dd2d21c6edee658b0b47 291 Gene3D G3DSA:1.10.600.10 2 288 1.9E-89 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily XFUD_10715 8c53edfbec652813f0b425300381aea4 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 63 188 1.7E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFUD_10715 8c53edfbec652813f0b425300381aea4 229 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 15 220 9.2E-94 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 XFUD_10715 8c53edfbec652813f0b425300381aea4 229 Gene3D G3DSA:3.40.50.1000 15 213 3.0E-52 T 11-10-2018 IPR023214 HAD superfamily XFUD_10715 8c53edfbec652813f0b425300381aea4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 154 8.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFUD_10715 8c53edfbec652813f0b425300381aea4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 107 120 8.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFUD_10715 8c53edfbec652813f0b425300381aea4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 12 23 8.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFUD_10715 8c53edfbec652813f0b425300381aea4 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 156 176 8.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFUD_10715 8c53edfbec652813f0b425300381aea4 229 SUPERFAMILY SSF56784 13 220 2.36E-52 T 11-10-2018 IPR036412 HAD-like superfamily XFUD_10715 8c53edfbec652813f0b425300381aea4 229 Gene3D G3DSA:1.10.150.240 27 93 3.0E-52 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 XFUD_10715 8c53edfbec652813f0b425300381aea4 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 192 4.9E-31 T 11-10-2018 XFUD_10715 8c53edfbec652813f0b425300381aea4 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 192 2.5E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFUD_10715 8c53edfbec652813f0b425300381aea4 229 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 12 221 30.984 T 11-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 XFUD_04585 6ad9a856165247dd8c47e7e03946b2ed 240 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_04585 6ad9a856165247dd8c47e7e03946b2ed 240 SMART SM00382 43 231 8.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_04585 6ad9a856165247dd8c47e7e03946b2ed 240 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 14 233 1.7E-104 T 11-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 XFUD_04585 6ad9a856165247dd8c47e7e03946b2ed 240 Pfam PF00005 ABC transporter 35 182 1.4E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_04585 6ad9a856165247dd8c47e7e03946b2ed 240 Gene3D G3DSA:3.40.50.300 12 240 9.9E-59 T 11-10-2018 XFUD_04585 6ad9a856165247dd8c47e7e03946b2ed 240 SUPERFAMILY SSF52540 14 236 2.34E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11190 84624f712282791db2e79ce1c5a5937f 143 Gene3D G3DSA:3.30.70.60 2 93 8.5E-29 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 XFUD_11190 84624f712282791db2e79ce1c5a5937f 143 SUPERFAMILY SSF54995 2 104 4.97E-34 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11190 84624f712282791db2e79ce1c5a5937f 143 TIGRFAM TIGR00166 S6: ribosomal protein bS6 3 93 6.6E-31 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11190 84624f712282791db2e79ce1c5a5937f 143 Pfam PF01250 Ribosomal protein S6 4 92 2.2E-26 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11190 84624f712282791db2e79ce1c5a5937f 143 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 2 95 20.824 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 XFUD_10175 dc5102e08f9bf4049ceed0bddeb41920 349 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 10 80 2.1E-7 T 11-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 XFUD_10175 dc5102e08f9bf4049ceed0bddeb41920 349 Gene3D G3DSA:3.30.390.60 133 234 6.2E-41 T 11-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily XFUD_10175 dc5102e08f9bf4049ceed0bddeb41920 349 SUPERFAMILY SSF55781 78 344 4.12E-63 T 11-10-2018 XFUD_10175 dc5102e08f9bf4049ceed0bddeb41920 349 Pfam PF01628 HrcA protein C terminal domain 110 329 4.1E-57 T 11-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 XFUD_10175 dc5102e08f9bf4049ceed0bddeb41920 349 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 8 336 29.087 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 XFUD_10175 dc5102e08f9bf4049ceed0bddeb41920 349 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 10 342 2.0E-103 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 XFUD_10175 dc5102e08f9bf4049ceed0bddeb41920 349 PIRSF PIRSF005485 6 346 1.1E-110 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 XFUD_10175 dc5102e08f9bf4049ceed0bddeb41920 349 Gene3D G3DSA:1.10.10.10 3 90 1.3E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_10175 dc5102e08f9bf4049ceed0bddeb41920 349 SUPERFAMILY SSF46785 9 90 2.94E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_10175 dc5102e08f9bf4049ceed0bddeb41920 349 Gene3D G3DSA:3.30.450.40 111 339 6.2E-41 T 11-10-2018 IPR029016 GAF-like domain superfamily XFUD_04590 68d01966f38d6d51dbe9cb7b6d610406 825 SUPERFAMILY SSF56281 545 781 1.83E-45 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFUD_04590 68d01966f38d6d51dbe9cb7b6d610406 825 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 168 770 8.1E-106 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 XFUD_04590 68d01966f38d6d51dbe9cb7b6d610406 825 Pfam PF13567 Domain of unknown function (DUF4131) 58 216 8.4E-24 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 XFUD_04590 68d01966f38d6d51dbe9cb7b6d610406 825 SMART SM00849 557 742 4.3E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFUD_04590 68d01966f38d6d51dbe9cb7b6d610406 825 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 275 451 4.4E-25 T 11-10-2018 IPR004477 ComEC/Rec2-related protein XFUD_04590 68d01966f38d6d51dbe9cb7b6d610406 825 Pfam PF03772 Competence protein 253 520 9.1E-66 T 11-10-2018 IPR004477 ComEC/Rec2-related protein XFUD_04590 68d01966f38d6d51dbe9cb7b6d610406 825 Gene3D G3DSA:3.60.15.10 546 781 1.7E-50 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFUD_04590 68d01966f38d6d51dbe9cb7b6d610406 825 Pfam PF00753 Metallo-beta-lactamase superfamily 554 718 3.8E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFUD_07525 d9ec9352b37a673d97a228c91a701f5e 616 Pfam PF07514 Putative helicase 27 340 1.7E-128 T 11-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative XFUD_07525 d9ec9352b37a673d97a228c91a701f5e 616 Gene3D G3DSA:1.10.3210.40 31 250 3.4E-40 T 11-10-2018 XFUD_07525 d9ec9352b37a673d97a228c91a701f5e 616 Gene3D G3DSA:1.10.10.10 490 560 4.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_07525 d9ec9352b37a673d97a228c91a701f5e 616 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 489 611 3.7E-48 T 11-10-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal XFUD_07525 d9ec9352b37a673d97a228c91a701f5e 616 SUPERFAMILY SSF46785 486 612 2.04E-43 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_07525 d9ec9352b37a673d97a228c91a701f5e 616 Gene3D G3DSA:2.40.10.200 506 606 4.2E-26 T 11-10-2018 XFUD_07525 d9ec9352b37a673d97a228c91a701f5e 616 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 26 243 2.9E-88 T 11-10-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class XFUD_04685 6308cee9b7cff38ed4deae8e6b2281d5 154 Gene3D G3DSA:1.10.287.180 1 70 2.8E-30 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 XFUD_04685 6308cee9b7cff38ed4deae8e6b2281d5 154 SUPERFAMILY SSF46557 1 72 3.4E-28 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 XFUD_04685 6308cee9b7cff38ed4deae8e6b2281d5 154 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 151 31.768 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 XFUD_04685 6308cee9b7cff38ed4deae8e6b2281d5 154 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 79 152 2.7E-26 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 XFUD_04685 6308cee9b7cff38ed4deae8e6b2281d5 154 Gene3D G3DSA:3.10.50.30 71 153 1.9E-28 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 XFUD_04685 6308cee9b7cff38ed4deae8e6b2281d5 154 PIRSF PIRSF006092 1 154 4.5E-50 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 XFUD_04685 6308cee9b7cff38ed4deae8e6b2281d5 154 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 1 151 1.8E-56 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 XFUD_04685 6308cee9b7cff38ed4deae8e6b2281d5 154 SUPERFAMILY SSF54534 78 152 2.09E-22 T 11-10-2018 XFUD_04685 6308cee9b7cff38ed4deae8e6b2281d5 154 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 12 43 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 XFUD_04685 6308cee9b7cff38ed4deae8e6b2281d5 154 Pfam PF03449 Transcription elongation factor, N-terminal 1 69 5.8E-31 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 XFUD_10570 5445bc23c082f74c146c452af025c1ea 223 Gene3D G3DSA:3.40.50.300 2 223 1.7E-72 T 11-10-2018 XFUD_10570 5445bc23c082f74c146c452af025c1ea 223 SUPERFAMILY SSF52540 7 221 5.19E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_10570 5445bc23c082f74c146c452af025c1ea 223 Pfam PF02224 Cytidylate kinase 9 221 9.4E-67 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 XFUD_10570 5445bc23c082f74c146c452af025c1ea 223 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.6E-69 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 XFUD_10570 5445bc23c082f74c146c452af025c1ea 223 Hamap MF_00238 Cytidylate kinase [cmk]. 6 222 30.208 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 XFUD_05020 af4b2d7f4a9ed89390cf0e3db449b0b8 430 PIRSF PIRSF500136 2 430 6.7E-151 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 XFUD_05020 af4b2d7f4a9ed89390cf0e3db449b0b8 430 SUPERFAMILY SSF52413 315 426 3.79E-24 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 XFUD_05020 af4b2d7f4a9ed89390cf0e3db449b0b8 430 Gene3D G3DSA:3.40.50.720 207 429 1.3E-52 T 11-10-2018 XFUD_05020 af4b2d7f4a9ed89390cf0e3db449b0b8 430 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 323 421 2.5E-20 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFUD_05020 af4b2d7f4a9ed89390cf0e3db449b0b8 430 PIRSF PIRSF000124 12 428 1.1E-47 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XFUD_05020 af4b2d7f4a9ed89390cf0e3db449b0b8 430 SUPERFAMILY SSF51735 13 196 4.96E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_05020 af4b2d7f4a9ed89390cf0e3db449b0b8 430 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 208 296 4.5E-23 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFUD_05020 af4b2d7f4a9ed89390cf0e3db449b0b8 430 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 13 186 1.6E-29 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFUD_05020 af4b2d7f4a9ed89390cf0e3db449b0b8 430 Gene3D G3DSA:3.40.50.720 3 203 4.4E-55 T 11-10-2018 XFUD_05020 af4b2d7f4a9ed89390cf0e3db449b0b8 430 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 13 418 2.3E-110 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XFUD_05020 af4b2d7f4a9ed89390cf0e3db449b0b8 430 SMART SM00984 323 423 2.7E-32 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFUD_05020 af4b2d7f4a9ed89390cf0e3db449b0b8 430 SUPERFAMILY SSF48179 206 297 1.68E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XFUD_00470 39506436fc13942f01a9fd0bba583403 299 Gene3D G3DSA:2.160.10.10 111 281 7.6E-54 T 11-10-2018 XFUD_00470 39506436fc13942f01a9fd0bba583403 299 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 28 296 4.0E-123 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 XFUD_00470 39506436fc13942f01a9fd0bba583403 299 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 27 93 2.5E-21 T 11-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 XFUD_00470 39506436fc13942f01a9fd0bba583403 299 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 156 190 3.6E-4 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_00470 39506436fc13942f01a9fd0bba583403 299 Gene3D G3DSA:1.10.166.10 25 94 1.4E-20 T 11-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 XFUD_00470 39506436fc13942f01a9fd0bba583403 299 SUPERFAMILY SSF51161 29 280 1.94E-65 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFUD_00470 39506436fc13942f01a9fd0bba583403 299 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 24 296 53.984 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 XFUD_00470 39506436fc13942f01a9fd0bba583403 299 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 199 233 7.9E-11 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_00175 74aa1edea8deca72a8f45a7df2551971 293 Gene3D G3DSA:3.40.50.150 1 293 6.8E-95 T 11-10-2018 XFUD_00175 74aa1edea8deca72a8f45a7df2551971 293 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 289 6.8E-106 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 XFUD_00175 74aa1edea8deca72a8f45a7df2551971 293 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 279 37.253 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 XFUD_00175 74aa1edea8deca72a8f45a7df2551971 293 SUPERFAMILY SSF53335 8 288 2.88E-74 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_08005 47eb7d85836c521106d4071c0eb08a95 349 SMART SM00388 120 187 9.1E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_08005 47eb7d85836c521106d4071c0eb08a95 349 Gene3D G3DSA:1.10.287.130 125 183 4.6E-11 T 11-10-2018 XFUD_08005 47eb7d85836c521106d4071c0eb08a95 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 121 179 4.4E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_08005 47eb7d85836c521106d4071c0eb08a95 349 SMART SM00387 226 339 9.6E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_08005 47eb7d85836c521106d4071c0eb08a95 349 SUPERFAMILY SSF47384 110 181 7.06E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFUD_08005 47eb7d85836c521106d4071c0eb08a95 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 336 8.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_08005 47eb7d85836c521106d4071c0eb08a95 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 271 285 8.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_08005 47eb7d85836c521106d4071c0eb08a95 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 8.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_08005 47eb7d85836c521106d4071c0eb08a95 349 Gene3D G3DSA:3.30.565.10 185 337 1.2E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_08005 47eb7d85836c521106d4071c0eb08a95 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 226 336 7.1E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_08005 47eb7d85836c521106d4071c0eb08a95 349 SUPERFAMILY SSF55874 190 336 1.57E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 SUPERFAMILY SSF48113 449 753 1.62E-108 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 SUPERFAMILY SSF48113 20 447 1.29E-151 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 11-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 Gene3D G3DSA:1.10.420.10 606 729 3.2E-145 T 11-10-2018 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 Gene3D G3DSA:1.10.420.20 191 416 3.3E-225 T 11-10-2018 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 278 288 - T 11-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 Hamap MF_01961 Catalase-peroxidase [katG]. 9 754 41.765 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 13 754 0.0 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 6.7E-13 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00458 Haem peroxidase superfamily signature 337 352 6.7E-13 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 6.7E-13 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 6.7E-13 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 Gene3D G3DSA:1.10.520.10 452 753 3.2E-145 T 11-10-2018 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 499 525 4.5E-56 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 4.5E-56 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 286 309 4.5E-56 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 4.5E-56 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 4.5E-56 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 Pfam PF00141 Peroxidase 423 727 2.1E-34 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 Pfam PF00141 Peroxidase 77 413 1.8E-48 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 XFUD_09730 6546295a699fc6a2708e3b6615645eb4 754 Gene3D G3DSA:1.10.520.10 20 449 3.3E-225 T 11-10-2018 XFUD_01760 9be31739a7c6f2bbb8d587cc6ad22ae1 264 Pfam PF00005 ABC transporter 23 170 2.5E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_01760 9be31739a7c6f2bbb8d587cc6ad22ae1 264 SUPERFAMILY SSF52540 6 234 7.82E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01760 9be31739a7c6f2bbb8d587cc6ad22ae1 264 Gene3D G3DSA:3.40.50.300 2 244 1.6E-58 T 11-10-2018 XFUD_01760 9be31739a7c6f2bbb8d587cc6ad22ae1 264 SMART SM00382 32 247 1.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_01760 9be31739a7c6f2bbb8d587cc6ad22ae1 264 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_00875 b7bfce6b3eed4b6b2ba41aa093532f4c 109 SUPERFAMILY SSF46565 43 105 9.68E-20 T 11-10-2018 IPR036869 Chaperone J-domain superfamily XFUD_00875 b7bfce6b3eed4b6b2ba41aa093532f4c 109 Gene3D G3DSA:1.10.287.110 34 109 8.1E-15 T 11-10-2018 IPR036869 Chaperone J-domain superfamily XFUD_00875 b7bfce6b3eed4b6b2ba41aa093532f4c 109 SMART SM00271 45 108 5.1E-13 T 11-10-2018 IPR001623 DnaJ domain XFUD_00875 b7bfce6b3eed4b6b2ba41aa093532f4c 109 Pfam PF00226 DnaJ domain 46 103 7.6E-12 T 11-10-2018 IPR001623 DnaJ domain XFUD_00875 b7bfce6b3eed4b6b2ba41aa093532f4c 109 PRINTS PR00625 DnaJ domain signature 66 81 2.2E-9 T 11-10-2018 IPR001623 DnaJ domain XFUD_00875 b7bfce6b3eed4b6b2ba41aa093532f4c 109 PRINTS PR00625 DnaJ domain signature 48 66 2.2E-9 T 11-10-2018 IPR001623 DnaJ domain XFUD_00875 b7bfce6b3eed4b6b2ba41aa093532f4c 109 PRINTS PR00625 DnaJ domain signature 88 108 2.2E-9 T 11-10-2018 IPR001623 DnaJ domain XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 703 743 6.4E-8 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 361 399 8.5E-5 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 532 570 4.1E-5 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 188 224 1.7E-4 T 11-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 111 135 6.7E-8 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 484 509 2.0E-4 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 140 165 8.4E-5 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 412 437 1.9E-4 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 582 608 3.4E-5 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF05658 Head domain of trimeric autotransporter adhesin 238 264 9.0E-6 T 11-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Gene3D G3DSA:3.30.1300.30 896 1004 6.5E-16 T 11-10-2018 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Gene3D G3DSA:1.20.5.170 706 793 1.3E-15 T 11-10-2018 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Gene3D G3DSA:2.150.10.10 579 705 6.7E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 SUPERFAMILY SSF54523 882 1004 4.39E-12 T 11-10-2018 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Gene3D G3DSA:2.150.10.10 50 218 1.0E-23 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Gene3D G3DSA:2.150.10.10 393 564 2.5E-28 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Gene3D G3DSA:2.150.10.10 219 392 2.0E-28 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 SUPERFAMILY SSF101967 408 554 5.49E-25 T 11-10-2018 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 SUPERFAMILY SSF101967 233 383 2.09E-25 T 11-10-2018 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 SUPERFAMILY SSF101967 576 728 4.05E-27 T 11-10-2018 XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 Pfam PF03895 YadA-like membrane anchor domain 952 1004 1.0E-9 T 11-10-2018 IPR005594 YadA-like, C-terminal XFUD_06405 92dfc75fb320c2a59970041508076ac4 1004 SUPERFAMILY SSF101967 109 210 1.44E-20 T 11-10-2018 XFUD_02490 5d1ed8df68aa1a853928ee46099810be 174 Pfam PF10029 Predicted periplasmic protein (DUF2271) 22 161 2.5E-50 T 11-10-2018 IPR014469 Protein of unknown function DUF2271 XFUD_02490 5d1ed8df68aa1a853928ee46099810be 174 PIRSF PIRSF014995 1 170 3.6E-74 T 11-10-2018 IPR014469 Protein of unknown function DUF2271 XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 Hamap MF_00743 Fumarate hydratase class II [fumC]. 7 459 81.297 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 ProSitePatterns PS00163 Fumarate lyases signature. 314 323 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 Gene3D G3DSA:1.20.200.10 136 402 9.1E-100 T 11-10-2018 XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 Gene3D G3DSA:1.10.275.10 8 135 4.0E-50 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 PRINTS PR00145 Argininosuccinate lyase family signature 314 330 1.2E-6 T 11-10-2018 XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 PRINTS PR00145 Argininosuccinate lyase family signature 130 152 1.2E-6 T 11-10-2018 XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 PRINTS PR00145 Argininosuccinate lyase family signature 172 192 1.2E-6 T 11-10-2018 XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 Pfam PF00206 Lyase 16 339 7.9E-95 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 SUPERFAMILY SSF48557 7 456 2.51E-140 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 PRINTS PR00149 Fumarate lyase superfamily signature 177 195 3.6E-32 T 11-10-2018 IPR000362 Fumarate lyase family XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 PRINTS PR00149 Fumarate lyase superfamily signature 131 149 3.6E-32 T 11-10-2018 IPR000362 Fumarate lyase family XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 PRINTS PR00149 Fumarate lyase superfamily signature 268 295 3.6E-32 T 11-10-2018 IPR000362 Fumarate lyase family XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 PRINTS PR00149 Fumarate lyase superfamily signature 314 330 3.6E-32 T 11-10-2018 IPR000362 Fumarate lyase family XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 Pfam PF10415 Fumarase C C-terminus 405 457 2.7E-17 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFUD_06575 72c9feb52f771c27ae9adcc2054ee934 469 Gene3D G3DSA:1.10.40.30 405 456 2.2E-17 T 11-10-2018 XFUD_07340 ab765d792bffb598b30ad808840b2d01 248 Pfam PF00912 Transglycosylase 74 231 6.9E-43 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_07340 ab765d792bffb598b30ad808840b2d01 248 SUPERFAMILY SSF53955 67 240 8.15E-54 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_07340 ab765d792bffb598b30ad808840b2d01 248 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 21 242 40.66 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_07340 ab765d792bffb598b30ad808840b2d01 248 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 23 239 1.4E-79 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_07340 ab765d792bffb598b30ad808840b2d01 248 Gene3D G3DSA:1.10.3810.10 67 240 3.3E-45 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_01875 c4c3cd0189a219f00bc4bed7e772d7d1 334 SUPERFAMILY SSF51735 124 300 4.25E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_01875 c4c3cd0189a219f00bc4bed7e772d7d1 334 Gene3D G3DSA:3.40.50.720 134 300 2.5E-97 T 11-10-2018 XFUD_01875 c4c3cd0189a219f00bc4bed7e772d7d1 334 SMART SM00829 24 331 1.5E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XFUD_01875 c4c3cd0189a219f00bc4bed7e772d7d1 334 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 12 333 8.9E-120 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI XFUD_01875 c4c3cd0189a219f00bc4bed7e772d7d1 334 SUPERFAMILY SSF50129 11 150 1.17E-35 T 11-10-2018 IPR011032 GroES-like superfamily XFUD_01875 c4c3cd0189a219f00bc4bed7e772d7d1 334 Gene3D G3DSA:3.90.180.10 26 332 2.5E-97 T 11-10-2018 XFUD_01875 c4c3cd0189a219f00bc4bed7e772d7d1 334 Pfam PF00107 Zinc-binding dehydrogenase 167 278 8.7E-8 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XFUD_04285 b0e55ba49e9a4632103de63664b98da8 438 SUPERFAMILY SSF55729 301 417 7.68E-10 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFUD_04285 b0e55ba49e9a4632103de63664b98da8 438 PIRSF PIRSF036441 18 438 1.2E-280 T 11-10-2018 IPR011242 Acetylglutamate kinase ArgB, GNAT domain-containing GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XFUD_04285 b0e55ba49e9a4632103de63664b98da8 438 Gene3D G3DSA:3.40.630.30 293 438 2.6E-57 T 11-10-2018 XFUD_04285 b0e55ba49e9a4632103de63664b98da8 438 SUPERFAMILY SSF53633 12 290 9.35E-52 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFUD_04285 b0e55ba49e9a4632103de63664b98da8 438 TIGRFAM TIGR00761 argB: acetylglutamate kinase 39 260 1.9E-60 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XFUD_04285 b0e55ba49e9a4632103de63664b98da8 438 Gene3D G3DSA:3.40.1160.10 1 292 5.6E-90 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFUD_04285 b0e55ba49e9a4632103de63664b98da8 438 Pfam PF00696 Amino acid kinase family 40 252 8.0E-28 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XFUD_04285 b0e55ba49e9a4632103de63664b98da8 438 Pfam PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase 272 431 2.8E-52 T 11-10-2018 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|Reactome: R-HSA-70635 XFUD_03445 f96a95d85fde14599b0cbc2c631a0447 584 SUPERFAMILY SSF50685 381 489 1.43E-16 T 11-10-2018 IPR036908 RlpA-like domain superfamily XFUD_03445 f96a95d85fde14599b0cbc2c631a0447 584 Gene3D G3DSA:2.40.40.10 378 484 3.9E-23 T 11-10-2018 IPR036908 RlpA-like domain superfamily XFUD_03445 f96a95d85fde14599b0cbc2c631a0447 584 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 42 259 2.2E-15 T 11-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 XFUD_03445 f96a95d85fde14599b0cbc2c631a0447 584 Gene3D G3DSA:3.20.20.80 25 341 7.9E-46 T 11-10-2018 XFUD_03445 f96a95d85fde14599b0cbc2c631a0447 584 Gene3D G3DSA:2.60.40.760 485 578 8.4E-31 T 11-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily XFUD_03445 f96a95d85fde14599b0cbc2c631a0447 584 Pfam PF03330 Lytic transglycolase 428 479 3.0E-7 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain XFUD_03445 f96a95d85fde14599b0cbc2c631a0447 584 SUPERFAMILY SSF51445 31 344 2.34E-39 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFUD_03445 f96a95d85fde14599b0cbc2c631a0447 584 SUPERFAMILY SSF49590 488 559 1.01E-11 T 11-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily XFUD_00245 6f5cbdde821077d9d799e41d776d2b64 241 Gene3D G3DSA:3.40.50.2020 115 240 5.5E-14 T 11-10-2018 XFUD_00245 6f5cbdde821077d9d799e41d776d2b64 241 SUPERFAMILY SSF53271 70 239 2.36E-27 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like XFUD_00245 6f5cbdde821077d9d799e41d776d2b64 241 Pfam PF00156 Phosphoribosyl transferase domain 196 233 2.8E-6 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XFUD_07595 2e770d449fa0868cf9ab81c146762179 222 SUPERFAMILY SSF69118 9 217 2.08E-38 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 XFUD_07595 2e770d449fa0868cf9ab81c146762179 222 Pfam PF02627 Carboxymuconolactone decarboxylase family 129 213 1.0E-10 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 XFUD_07595 2e770d449fa0868cf9ab81c146762179 222 Pfam PF02627 Carboxymuconolactone decarboxylase family 10 72 3.4E-6 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 XFUD_07595 2e770d449fa0868cf9ab81c146762179 222 Gene3D G3DSA:1.20.1290.10 4 220 1.4E-47 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 295.81 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 1.0E-51 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 145 2.1E-15 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.0E-7 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 Gene3D G3DSA:3.30.70.3380 368 478 7.0E-38 T 11-10-2018 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 SUPERFAMILY SSF54980 399 493 1.29E-23 T 11-10-2018 IPR035647 EF-G domain III/V-like XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 Gene3D G3DSA:2.40.30.10 187 285 3.7E-30 T 11-10-2018 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 Gene3D G3DSA:3.30.70.2570 480 553 2.9E-32 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 SUPERFAMILY SSF52540 2 201 2.17E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 1.3E-51 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 Gene3D G3DSA:3.40.50.300 1 185 3.1E-70 T 11-10-2018 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 TIGRFAM TIGR01393 lepA: elongation factor 4 3 595 9.5E-293 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 Gene3D G3DSA:3.30.70.870 286 367 1.9E-36 T 11-10-2018 XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 Pfam PF00679 Elongation factor G C-terminus 399 479 4.2E-19 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 SUPERFAMILY SSF50447 166 288 6.82E-27 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 SUPERFAMILY SSF54980 292 370 6.83E-19 T 11-10-2018 IPR035647 EF-G domain III/V-like XFUD_09775 04fbc882b4c1175a581c5cf8d539fa37 597 SMART SM00838 398 486 0.0019 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 Gene3D G3DSA:3.30.70.1430 40 132 1.9E-206 T 11-10-2018 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 Gene3D G3DSA:3.30.70.1430 557 651 1.9E-206 T 11-10-2018 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 Gene3D G3DSA:1.20.1640.10 504 556 1.9E-206 T 11-10-2018 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 Gene3D G3DSA:1.20.1640.10 888 1044 4.3E-75 T 11-10-2018 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 Gene3D G3DSA:3.30.2090.10 704 780 1.9E-206 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 Gene3D G3DSA:3.30.2090.10 810 829 4.3E-75 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 SUPERFAMILY SSF82693 555 650 2.82E-12 T 11-10-2018 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 SUPERFAMILY SSF82693 136 322 1.2E-22 T 11-10-2018 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 Gene3D G3DSA:1.20.1640.10 10 503 1.9E-206 T 11-10-2018 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 Gene3D G3DSA:3.30.70.1440 652 703 1.9E-206 T 11-10-2018 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 Gene3D G3DSA:3.30.70.1440 838 887 4.3E-75 T 11-10-2018 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 SUPERFAMILY SSF82866 288 489 2.88E-48 T 11-10-2018 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 Gene3D G3DSA:3.30.2090.10 177 267 1.9E-206 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 Pfam PF00873 AcrB/AcrD/AcrF family 4 1047 4.4E-300 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 SUPERFAMILY SSF82693 40 130 3.4E-20 T 11-10-2018 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 SUPERFAMILY SSF82866 826 1050 4.45E-45 T 11-10-2018 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 SUPERFAMILY SSF82714 181 265 4.58E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 SUPERFAMILY SSF82714 706 775 2.88E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 PRINTS PR00702 Acriflavin resistance protein family signature 609 623 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 6.0E-73 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10335 10ee1bcf286970f45b4d58e0cb0510d8 1071 Gene3D G3DSA:3.30.70.1320 133 324 1.9E-206 T 11-10-2018 XFUD_11160 62aa971e0fff231dd386539a6116a888 157 Gene3D G3DSA:3.40.630.30 1 156 2.4E-31 T 11-10-2018 XFUD_11160 62aa971e0fff231dd386539a6116a888 157 Pfam PF00583 Acetyltransferase (GNAT) family 24 140 1.6E-10 T 11-10-2018 IPR000182 GNAT domain XFUD_11160 62aa971e0fff231dd386539a6116a888 157 SUPERFAMILY SSF55729 9 144 8.54E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFUD_11660 b94f7445a8048c8887bb43282c5172e7 535 SUPERFAMILY SSF81296 415 527 5.32E-24 T 11-10-2018 IPR014756 Immunoglobulin E-set XFUD_11660 b94f7445a8048c8887bb43282c5172e7 535 PIRSF PIRSF006281 1 528 3.4E-209 T 11-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD XFUD_11660 b94f7445a8048c8887bb43282c5172e7 535 Gene3D G3DSA:2.70.98.10 43 411 4.1E-153 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 XFUD_11660 b94f7445a8048c8887bb43282c5172e7 535 Gene3D G3DSA:2.60.40.10 415 535 2.7E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFUD_11660 b94f7445a8048c8887bb43282c5172e7 535 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 44 524 5.5E-192 T 11-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 XFUD_11660 b94f7445a8048c8887bb43282c5172e7 535 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 534 59.115 T 11-10-2018 IPR023724 Glucan biosynthesis, MdoD XFUD_11660 b94f7445a8048c8887bb43282c5172e7 535 SUPERFAMILY SSF74650 44 413 9.42E-154 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 XFUD_03725 cebccaa6a5934bdf44d1677e56f0cd03 792 SUPERFAMILY SSF53955 149 350 1.32E-54 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_03725 cebccaa6a5934bdf44d1677e56f0cd03 792 Gene3D G3DSA:1.10.3810.10 147 353 2.0E-215 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_03725 cebccaa6a5934bdf44d1677e56f0cd03 792 SUPERFAMILY SSF56601 311 753 1.34E-96 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFUD_03725 cebccaa6a5934bdf44d1677e56f0cd03 792 Pfam PF14814 Bifunctional transglycosylase second domain 59 143 1.2E-19 T 11-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_03725 cebccaa6a5934bdf44d1677e56f0cd03 792 Pfam PF00905 Penicillin binding protein transpeptidase domain 427 676 5.5E-15 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XFUD_03725 cebccaa6a5934bdf44d1677e56f0cd03 792 Pfam PF00912 Transglycosylase 150 329 9.8E-51 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_03725 cebccaa6a5934bdf44d1677e56f0cd03 792 Gene3D G3DSA:3.40.710.10 49 709 2.0E-215 T 11-10-2018 XFUD_03725 cebccaa6a5934bdf44d1677e56f0cd03 792 Gene3D G3DSA:3.30.2060.10 57 146 2.0E-215 T 11-10-2018 XFUD_03725 cebccaa6a5934bdf44d1677e56f0cd03 792 PIRSF PIRSF002799 4 770 3.2E-263 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_03725 cebccaa6a5934bdf44d1677e56f0cd03 792 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 14 748 0.0 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_01470 c09967578f73f4f6dacbaea355d09ba6 173 Pfam PF02600 Disulfide bond formation protein DsbB 9 160 2.6E-37 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 XFUD_01470 c09967578f73f4f6dacbaea355d09ba6 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 4 168 21.101 T 11-10-2018 IPR022920 Disulphide bond formation protein DsbB XFUD_01470 c09967578f73f4f6dacbaea355d09ba6 173 SUPERFAMILY SSF158442 13 160 3.01E-38 T 11-10-2018 IPR023380 DsbB-like superfamily XFUD_01470 c09967578f73f4f6dacbaea355d09ba6 173 Gene3D G3DSA:1.20.1550.10 4 173 9.4E-45 T 11-10-2018 IPR023380 DsbB-like superfamily XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Pfam PF00575 S1 RNA binding domain 620 691 3.5E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SUPERFAMILY SSF54791 556 640 1.31E-22 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 321 4.0E-14 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 5.1E-10 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Pfam PF03725 3' exoribonuclease family, domain 2 460 528 4.8E-6 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Gene3D G3DSA:3.30.230.70 1 229 4.2E-78 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Gene3D G3DSA:3.30.230.70 233 550 4.6E-114 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SMART SM00316 621 691 6.0E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SUPERFAMILY SSF55666 451 550 1.82E-28 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SUPERFAMILY SSF50249 612 694 2.22E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Gene3D G3DSA:2.40.50.140 623 695 6.3E-29 T 11-10-2018 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 694 30.364 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 PIRSF PIRSF005499 1 699 3.1E-293 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SUPERFAMILY SSF55666 144 235 2.52E-27 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 3.0E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 8.1E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SUPERFAMILY SSF54211 296 489 3.34E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SUPERFAMILY SSF54211 4 143 1.97E-49 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SUPERFAMILY SSF46915 238 321 8.37E-15 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Pfam PF00013 KH domain 558 614 1.0E-9 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 693 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 SMART SM00322 553 618 1.3E-10 T 11-10-2018 IPR004087 K Homology domain GO:0003676 XFUD_01030 511a635ddd6268e6dbdda3b9e7745fd5 700 Gene3D G3DSA:3.30.1370.10 551 622 1.4E-19 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 XFUD_04640 bf166096bf4d0ac249c68884b73357f7 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 195 6.1E-44 T 11-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 XFUD_04640 bf166096bf4d0ac249c68884b73357f7 199 Gene3D G3DSA:3.40.50.360 1 196 3.8E-60 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFUD_04640 bf166096bf4d0ac249c68884b73357f7 199 Pfam PF03358 NADPH-dependent FMN reductase 65 130 9.0E-9 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 XFUD_04640 bf166096bf4d0ac249c68884b73357f7 199 SUPERFAMILY SSF52218 1 195 5.34E-55 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFUD_10305 8d371036b28f1ba0971144e91e39fe25 215 Pfam PF00694 Aconitase C-terminal domain 1 131 4.2E-37 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 XFUD_10305 8d371036b28f1ba0971144e91e39fe25 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.469 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 XFUD_10305 8d371036b28f1ba0971144e91e39fe25 215 SUPERFAMILY SSF52016 1 203 3.92E-62 T 11-10-2018 XFUD_10305 8d371036b28f1ba0971144e91e39fe25 215 Gene3D G3DSA:3.20.19.10 1 184 1.4E-74 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 XFUD_10305 8d371036b28f1ba0971144e91e39fe25 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.4E-85 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 XFUD_06015 738d0b0e4616099c185cf51f69d2f2e6 454 Gene3D G3DSA:3.30.590.20 3 454 1.5E-177 T 11-10-2018 XFUD_06015 738d0b0e4616099c185cf51f69d2f2e6 454 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 56 358 9.0E-94 T 11-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 XFUD_06015 738d0b0e4616099c185cf51f69d2f2e6 454 SUPERFAMILY SSF55931 27 445 7.26E-67 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 XFUD_06015 738d0b0e4616099c185cf51f69d2f2e6 454 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 11 454 1.7E-210 T 11-10-2018 IPR011556 Glutamate--cysteine ligase, plant-type GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 XFUD_06015 738d0b0e4616099c185cf51f69d2f2e6 454 PIRSF PIRSF017901 2 454 3.0E-184 T 11-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 XFUD_02420 65960f21e79e04f927bb94f69819d86f 700 Gene3D G3DSA:1.10.1380.10 93 483 3.9E-224 T 11-10-2018 XFUD_02420 65960f21e79e04f927bb94f69819d86f 700 Pfam PF05649 Peptidase family M13 67 444 1.3E-93 T 11-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 XFUD_02420 65960f21e79e04f927bb94f69819d86f 700 Gene3D G3DSA:3.40.390.10 62 700 3.9E-224 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 XFUD_02420 65960f21e79e04f927bb94f69819d86f 700 SUPERFAMILY SSF55486 55 700 2.49E-204 T 11-10-2018 XFUD_02420 65960f21e79e04f927bb94f69819d86f 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 527 543 8.8E-22 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XFUD_02420 65960f21e79e04f927bb94f69819d86f 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 488 500 8.8E-22 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XFUD_02420 65960f21e79e04f927bb94f69819d86f 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 506 518 8.8E-22 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XFUD_02420 65960f21e79e04f927bb94f69819d86f 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 598 609 8.8E-22 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XFUD_02420 65960f21e79e04f927bb94f69819d86f 700 Pfam PF01431 Peptidase family M13 496 697 3.0E-69 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 XFUD_01910 4ce2b69fcc37391c0f95880ea59e9adb 406 Gene3D G3DSA:3.20.20.70 90 369 6.9E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_01910 4ce2b69fcc37391c0f95880ea59e9adb 406 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 27 384 72.69 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 XFUD_01910 4ce2b69fcc37391c0f95880ea59e9adb 406 Pfam PF04055 Radical SAM superfamily 134 303 4.2E-19 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XFUD_01910 4ce2b69fcc37391c0f95880ea59e9adb 406 Gene3D G3DSA:1.10.150.530 27 89 7.2E-24 T 11-10-2018 XFUD_01910 4ce2b69fcc37391c0f95880ea59e9adb 406 SUPERFAMILY SSF102114 130 368 4.58E-17 T 11-10-2018 XFUD_01910 4ce2b69fcc37391c0f95880ea59e9adb 406 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 26 388 8.9E-134 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 XFUD_01910 4ce2b69fcc37391c0f95880ea59e9adb 406 PIRSF PIRSF006004 20 397 1.7E-150 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 Gene3D G3DSA:1.10.460.10 139 565 3.1E-170 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 1.4E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.4E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 488 502 1.4E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 1.4E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 381 397 1.4E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 SMART SM00437 252 525 2.3E-115 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 Gene3D G3DSA:1.10.290.10 260 396 3.1E-170 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF01131 DNA topoisomerase 133 562 2.3E-130 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 618 5.3E-227 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 674 55.583 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 312 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 Gene3D G3DSA:3.40.50.140 1 138 7.5E-50 T 11-10-2018 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF13368 Topoisomerase C-terminal repeat 715 757 1.4E-13 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF13368 Topoisomerase C-terminal repeat 594 653 8.9E-12 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF13368 Topoisomerase C-terminal repeat 658 703 8.1E-11 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 Pfam PF01751 Toprim domain 5 117 5.2E-26 T 11-10-2018 IPR006171 TOPRIM domain XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 SMART SM00493 3 103 7.8E-32 T 11-10-2018 IPR006171 TOPRIM domain XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 Gene3D G3DSA:2.70.20.10 188 472 3.1E-170 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 SMART SM00436 108 196 1.5E-46 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 XFUD_03950 a2bb845f82c3c320e6427e10fe3010b5 815 SUPERFAMILY SSF56712 3 576 3.53E-186 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XFUD_11195 5188264a7dc158f4e1a2006bea98baeb 112 Gene3D G3DSA:2.60.300.12 2 107 5.0E-31 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFUD_11195 5188264a7dc158f4e1a2006bea98baeb 112 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 XFUD_11195 5188264a7dc158f4e1a2006bea98baeb 112 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 4.6E-15 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 XFUD_11195 5188264a7dc158f4e1a2006bea98baeb 112 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 5.1E-30 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 XFUD_11195 5188264a7dc158f4e1a2006bea98baeb 112 SUPERFAMILY SSF89360 1 95 9.61E-26 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFUD_09985 3dab682e445d92b7895877d4e151608d 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 145 1.1E-34 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I XFUD_09985 3dab682e445d92b7895877d4e151608d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 4.9E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 XFUD_09985 3dab682e445d92b7895877d4e151608d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 122 137 4.9E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 XFUD_09985 3dab682e445d92b7895877d4e151608d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 4.9E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 XFUD_09985 3dab682e445d92b7895877d4e151608d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 4.9E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 XFUD_09985 3dab682e445d92b7895877d4e151608d 154 SMART SM00226 1 150 4.2E-40 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I XFUD_09985 3dab682e445d92b7895877d4e151608d 154 Gene3D G3DSA:3.40.50.2300 1 154 6.4E-49 T 11-10-2018 XFUD_09985 3dab682e445d92b7895877d4e151608d 154 SUPERFAMILY SSF52788 1 151 2.09E-46 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily XFUD_11315 30c6336793ebfc0821ba345435992580 231 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 226 3.9E-107 T 11-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 XFUD_11315 30c6336793ebfc0821ba345435992580 231 SMART SM00448 3 116 2.1E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11315 30c6336793ebfc0821ba345435992580 231 SUPERFAMILY SSF46894 127 225 3.12E-28 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XFUD_11315 30c6336793ebfc0821ba345435992580 231 SUPERFAMILY SSF52172 3 124 1.99E-41 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_11315 30c6336793ebfc0821ba345435992580 231 Gene3D G3DSA:3.40.50.2300 1 128 1.5E-37 T 11-10-2018 XFUD_11315 30c6336793ebfc0821ba345435992580 231 Pfam PF00072 Response regulator receiver domain 5 117 3.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11315 30c6336793ebfc0821ba345435992580 231 SMART SM00862 150 225 2.4E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFUD_11315 30c6336793ebfc0821ba345435992580 231 Gene3D G3DSA:1.10.10.10 129 227 2.8E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_11315 30c6336793ebfc0821ba345435992580 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 4.4E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFUD_09660 dd59de563eeab12486c3b6a9901897cb 375 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 1 375 48.402 T 11-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 XFUD_09660 dd59de563eeab12486c3b6a9901897cb 375 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 146 4.0E-18 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 XFUD_09660 dd59de563eeab12486c3b6a9901897cb 375 Gene3D G3DSA:3.30.230.40 275 375 4.1E-36 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 XFUD_09660 dd59de563eeab12486c3b6a9901897cb 375 SUPERFAMILY SSF54211 276 361 2.91E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_09660 dd59de563eeab12486c3b6a9901897cb 375 SUPERFAMILY SSF54211 169 253 8.35E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_09660 dd59de563eeab12486c3b6a9901897cb 375 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 357 2.2E-63 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XFUD_09660 dd59de563eeab12486c3b6a9901897cb 375 Gene3D G3DSA:3.40.50.1000 1 152 2.0E-34 T 11-10-2018 IPR023214 HAD superfamily XFUD_09660 dd59de563eeab12486c3b6a9901897cb 375 SUPERFAMILY SSF56784 1 149 8.95E-34 T 11-10-2018 IPR036412 HAD-like superfamily XFUD_09660 dd59de563eeab12486c3b6a9901897cb 375 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 375 36.289 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XFUD_09660 dd59de563eeab12486c3b6a9901897cb 375 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 339 351 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XFUD_09660 dd59de563eeab12486c3b6a9901897cb 375 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 143 5.2E-34 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 XFUD_09660 dd59de563eeab12486c3b6a9901897cb 375 Gene3D G3DSA:3.30.230.40 156 256 5.9E-38 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 XFUD_09660 dd59de563eeab12486c3b6a9901897cb 375 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 164 1.2E-73 T 11-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 XFUD_09660 dd59de563eeab12486c3b6a9901897cb 375 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 XFUD_04870 1b58b754489e7bbe112a0b792a8abde9 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 23.762 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04870 1b58b754489e7bbe112a0b792a8abde9 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.6E-11 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04870 1b58b754489e7bbe112a0b792a8abde9 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.6E-11 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04870 1b58b754489e7bbe112a0b792a8abde9 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.6E-11 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04870 1b58b754489e7bbe112a0b792a8abde9 103 SUPERFAMILY SSF54999 5 102 7.46E-33 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily XFUD_04870 1b58b754489e7bbe112a0b792a8abde9 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04870 1b58b754489e7bbe112a0b792a8abde9 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.0E-29 T 11-10-2018 IPR027486 Ribosomal protein S10 domain XFUD_04870 1b58b754489e7bbe112a0b792a8abde9 103 Gene3D G3DSA:3.30.70.600 1 103 4.6E-32 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily XFUD_04870 1b58b754489e7bbe112a0b792a8abde9 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 5.9E-40 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04870 1b58b754489e7bbe112a0b792a8abde9 103 SMART SM01403 7 101 1.8E-48 T 11-10-2018 IPR027486 Ribosomal protein S10 domain XFUD_00210 7ca3cfb37b76044d01fb9e2647e32261 728 SUPERFAMILY SSF52540 7 648 3.24E-173 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00210 7ca3cfb37b76044d01fb9e2647e32261 728 Gene3D G3DSA:3.40.50.300 282 642 1.7E-121 T 11-10-2018 XFUD_00210 7ca3cfb37b76044d01fb9e2647e32261 728 Gene3D G3DSA:1.10.486.10 383 544 1.7E-121 T 11-10-2018 XFUD_00210 7ca3cfb37b76044d01fb9e2647e32261 728 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 6.4E-65 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 XFUD_00210 7ca3cfb37b76044d01fb9e2647e32261 728 Pfam PF13361 UvrD-like helicase C-terminal domain 278 622 2.5E-75 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XFUD_00210 7ca3cfb37b76044d01fb9e2647e32261 728 Gene3D G3DSA:1.10.10.160 114 188 8.1E-92 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily XFUD_00210 7ca3cfb37b76044d01fb9e2647e32261 728 Gene3D G3DSA:3.40.50.300 10 274 8.1E-92 T 11-10-2018 XFUD_00210 7ca3cfb37b76044d01fb9e2647e32261 728 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 726 0.0 T 11-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 XFUD_00820 137da040da8ab015b2c1ab375fc956d0 446 Gene3D G3DSA:3.40.50.300 1 208 1.9E-76 T 11-10-2018 XFUD_00820 137da040da8ab015b2c1ab375fc956d0 446 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XFUD_00820 137da040da8ab015b2c1ab375fc956d0 446 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.7E-29 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_00820 137da040da8ab015b2c1ab375fc956d0 446 SUPERFAMILY SSF52540 74 360 1.25E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00820 137da040da8ab015b2c1ab375fc956d0 446 Pfam PF00270 DEAD/DEAH box helicase 25 196 2.1E-50 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFUD_00820 137da040da8ab015b2c1ab375fc956d0 446 SMART SM00490 259 340 2.4E-31 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_00820 137da040da8ab015b2c1ab375fc956d0 446 SMART SM00487 20 223 1.1E-58 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_00820 137da040da8ab015b2c1ab375fc956d0 446 Gene3D G3DSA:3.40.50.300 209 374 5.7E-48 T 11-10-2018 XFUD_04875 5759893db43fe3d7ac28c55c28a01380 215 Gene3D G3DSA:2.40.30.10 135 215 2.4E-14 T 11-10-2018 XFUD_04875 5759893db43fe3d7ac28c55c28a01380 215 SUPERFAMILY SSF50447 4 214 1.94E-75 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFUD_04875 5759893db43fe3d7ac28c55c28a01380 215 Gene3D G3DSA:2.40.50.620 36 100 2.6E-15 T 11-10-2018 XFUD_04875 5759893db43fe3d7ac28c55c28a01380 215 Pfam PF00297 Ribosomal protein L3 105 188 2.1E-13 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04875 5759893db43fe3d7ac28c55c28a01380 215 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 5 213 38.7 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04875 5759893db43fe3d7ac28c55c28a01380 215 ProSitePatterns PS00474 Ribosomal protein L3 signature. 107 130 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site XFUD_04875 5759893db43fe3d7ac28c55c28a01380 215 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 7 210 4.9E-84 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_06550 f3ca66dd4b920d5ac0bef0ae79373ed1 391 SUPERFAMILY SSF52777 162 389 1.2E-86 T 11-10-2018 XFUD_06550 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 162 388 6.0E-83 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 XFUD_06550 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Gene3D G3DSA:4.10.320.10 112 152 3.2E-9 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XFUD_06550 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Gene3D G3DSA:2.40.50.100 1 94 1.9E-21 T 11-10-2018 XFUD_06550 f3ca66dd4b920d5ac0bef0ae79373ed1 391 SUPERFAMILY SSF51230 1 85 8.38E-25 T 11-10-2018 IPR011053 Single hybrid motif XFUD_06550 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Pfam PF00364 Biotin-requiring enzyme 4 76 6.8E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment XFUD_06550 f3ca66dd4b920d5ac0bef0ae79373ed1 391 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 390 1.1E-181 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 XFUD_06550 f3ca66dd4b920d5ac0bef0ae79373ed1 391 SUPERFAMILY SSF47005 106 149 5.1E-8 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XFUD_06550 f3ca66dd4b920d5ac0bef0ae79373ed1 391 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XFUD_06550 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Pfam PF02817 e3 binding domain 114 144 1.4E-6 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 XFUD_06550 f3ca66dd4b920d5ac0bef0ae79373ed1 391 Gene3D G3DSA:3.30.559.10 159 390 9.9E-95 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XFUD_06470 4a579530d3779f1f8b97a57e76e9c3ee 186 Pfam PF00578 AhpC/TSA family 10 132 1.2E-32 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XFUD_06470 4a579530d3779f1f8b97a57e76e9c3ee 186 Gene3D G3DSA:3.40.30.10 1 185 8.3E-60 T 11-10-2018 XFUD_06470 4a579530d3779f1f8b97a57e76e9c3ee 186 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 186 2.0E-99 T 11-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 XFUD_06470 4a579530d3779f1f8b97a57e76e9c3ee 186 PIRSF PIRSF000239 1 186 1.1E-52 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XFUD_06470 4a579530d3779f1f8b97a57e76e9c3ee 186 SUPERFAMILY SSF52833 3 185 2.15E-55 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_06190 9bc1af4aff8d659880acbece3972c62d 284 SUPERFAMILY SSF88713 21 250 3.95E-41 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XFUD_06190 9bc1af4aff8d659880acbece3972c62d 284 Gene3D G3DSA:3.20.20.370 1 251 1.4E-60 T 11-10-2018 XFUD_06190 9bc1af4aff8d659880acbece3972c62d 284 Pfam PF01522 Polysaccharide deacetylase 56 223 3.7E-38 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XFUD_01935 b444404221928035e1716ea32690dc61 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 3.3E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_01935 b444404221928035e1716ea32690dc61 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.3E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_01935 b444404221928035e1716ea32690dc61 465 PIRSF PIRSF006485 1 442 2.6E-167 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 XFUD_01935 b444404221928035e1716ea32690dc61 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 159 3.0E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFUD_01935 b444404221928035e1716ea32690dc61 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 178 344 5.0E-26 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFUD_01935 b444404221928035e1716ea32690dc61 465 SUPERFAMILY SSF52540 1 166 1.48E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01935 b444404221928035e1716ea32690dc61 465 Hamap MF_00195 GTPase Der [der]. 2 437 36.059 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 XFUD_01935 b444404221928035e1716ea32690dc61 465 SMART SM00382 177 328 0.28 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_01935 b444404221928035e1716ea32690dc61 465 SMART SM00382 1 166 1.8 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_01935 b444404221928035e1716ea32690dc61 465 Gene3D G3DSA:3.40.50.300 5 167 1.1E-41 T 11-10-2018 XFUD_01935 b444404221928035e1716ea32690dc61 465 Gene3D G3DSA:3.40.50.300 173 349 1.1E-47 T 11-10-2018 XFUD_01935 b444404221928035e1716ea32690dc61 465 SUPERFAMILY SSF52540 139 440 2.1E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01935 b444404221928035e1716ea32690dc61 465 Gene3D G3DSA:3.30.300.20 354 436 5.1E-20 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta XFUD_01935 b444404221928035e1716ea32690dc61 465 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.2E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_01935 b444404221928035e1716ea32690dc61 465 Pfam PF01926 50S ribosome-binding GTPase 180 298 7.8E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_01935 b444404221928035e1716ea32690dc61 465 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 355 434 2.3E-22 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like XFUD_01935 b444404221928035e1716ea32690dc61 465 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 434 8.0E-160 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 8.6E-226 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 SUPERFAMILY SSF50249 1 112 2.36E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 585 32.692 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 Gene3D G3DSA:3.30.930.10 120 582 3.2E-187 T 11-10-2018 XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 Pfam PF02938 GAD domain 311 405 3.4E-23 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 3.8E-107 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 6.3E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 6.3E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 6.3E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 6.3E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 SUPERFAMILY SSF55681 115 582 3.98E-104 T 11-10-2018 XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 Pfam PF01336 OB-fold nucleic acid binding domain 18 105 2.9E-13 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 SUPERFAMILY SSF55261 293 420 1.13E-36 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 Gene3D G3DSA:2.40.50.140 1 114 2.5E-29 T 11-10-2018 XFUD_08035 a20afea35a01860b14fff7d947db77ab 589 Gene3D G3DSA:3.30.1360.30 275 420 3.2E-187 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 SUPERFAMILY SSF50621 228 357 3.49E-42 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 SMART SM01005 233 356 2.6E-57 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 191 218 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 60 78 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 120 132 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 287 304 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 25 41 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 249 264 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 154 165 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 PRINTS PR00992 Alanine racemase signature 266 281 3.5E-57 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 Hamap MF_01201 Alanine racemase. 1 356 33.524 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 1.6E-69 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 Pfam PF00842 Alanine racemase, C-terminal domain 233 355 1.6E-36 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 Gene3D G3DSA:2.40.37.10 8 353 1.6E-123 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 Gene3D G3DSA:3.20.20.10 10 216 1.6E-123 T 11-10-2018 IPR029066 PLP-binding barrel XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 SUPERFAMILY SSF51419 8 234 1.44E-70 T 11-10-2018 IPR029066 PLP-binding barrel XFUD_03605 12a7c3a04e4365a3349e73d067a16585 362 TIGRFAM TIGR00492 alr: alanine racemase 3 356 1.2E-102 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_00255 bf0b252cd2e4a0c2e08bbe00078abefa 346 Gene3D G3DSA:3.40.1090.10 142 258 3.1E-17 T 11-10-2018 XFUD_00255 bf0b252cd2e4a0c2e08bbe00078abefa 346 Gene3D G3DSA:3.40.1090.10 29 141 1.7E-22 T 11-10-2018 XFUD_00255 bf0b252cd2e4a0c2e08bbe00078abefa 346 SUPERFAMILY SSF52151 40 296 7.85E-60 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase XFUD_00255 bf0b252cd2e4a0c2e08bbe00078abefa 346 Pfam PF01734 Patatin-like phospholipase 50 206 6.2E-28 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 XFUD_11225 116488669b6270226d775bc43e8d2c8b 351 SUPERFAMILY SSF51395 1 338 3.05E-101 T 11-10-2018 XFUD_11225 116488669b6270226d775bc43e8d2c8b 351 Pfam PF01180 Dihydroorotate dehydrogenase 45 336 1.8E-89 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 XFUD_11225 116488669b6270226d775bc43e8d2c8b 351 PIRSF PIRSF000164 15 346 1.2E-96 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 XFUD_11225 116488669b6270226d775bc43e8d2c8b 351 Gene3D G3DSA:3.20.20.70 1 336 6.7E-128 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_11225 116488669b6270226d775bc43e8d2c8b 351 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 340 1.0E-124 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 XFUD_11225 116488669b6270226d775bc43e8d2c8b 351 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 XFUD_11225 116488669b6270226d775bc43e8d2c8b 351 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 336 48.715 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 XFUD_00400 82b7e4d0f5c58a3ffcaf239c925da0b8 126 SUPERFAMILY SSF64076 4 122 2.22E-27 T 11-10-2018 IPR036748 MTH938-like superfamily XFUD_00400 82b7e4d0f5c58a3ffcaf239c925da0b8 126 Gene3D G3DSA:3.40.1230.10 14 123 1.5E-28 T 11-10-2018 IPR036748 MTH938-like superfamily XFUD_00400 82b7e4d0f5c58a3ffcaf239c925da0b8 126 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 20 121 5.4E-22 T 11-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein XFUD_12125 2f716d1a4b61a348f6203c35b44409fd 451 Gene3D G3DSA:3.30.1360.120 1 125 5.2E-40 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 XFUD_12125 2f716d1a4b61a348f6203c35b44409fd 451 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 451 4.7E-96 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 XFUD_12125 2f716d1a4b61a348f6203c35b44409fd 451 Gene3D G3DSA:3.40.50.300 221 380 2.6E-94 T 11-10-2018 XFUD_12125 2f716d1a4b61a348f6203c35b44409fd 451 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 451 31.183 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 XFUD_12125 2f716d1a4b61a348f6203c35b44409fd 451 SUPERFAMILY SSF116878 125 451 2.48E-43 T 11-10-2018 XFUD_12125 2f716d1a4b61a348f6203c35b44409fd 451 Pfam PF12631 MnmE helical domain 127 448 2.4E-51 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 XFUD_12125 2f716d1a4b61a348f6203c35b44409fd 451 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 124 4.4E-36 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 XFUD_12125 2f716d1a4b61a348f6203c35b44409fd 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 290 308 3.4E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_12125 2f716d1a4b61a348f6203c35b44409fd 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 223 243 3.4E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_12125 2f716d1a4b61a348f6203c35b44409fd 451 Gene3D G3DSA:1.20.120.430 126 451 2.6E-94 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 XFUD_12125 2f716d1a4b61a348f6203c35b44409fd 451 Pfam PF01926 50S ribosome-binding GTPase 224 312 1.2E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_12125 2f716d1a4b61a348f6203c35b44409fd 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 224 349 4.3E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFUD_12125 2f716d1a4b61a348f6203c35b44409fd 451 SUPERFAMILY SSF52540 76 367 4.94E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 Gene3D G3DSA:3.30.1490.20 2 194 3.8E-70 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 Gene3D G3DSA:3.20.20.60 477 789 5.9E-99 T 11-10-2018 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 SUPERFAMILY SSF52009 347 465 5.49E-34 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 PIRSF PIRSF000854 1 791 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 5.0E-5 T 11-10-2018 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 5.0E-5 T 11-10-2018 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 5.0E-5 T 11-10-2018 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 Gene3D G3DSA:3.50.30.10 358 476 9.3E-40 T 11-10-2018 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 787 6.1E-60 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 4.5E-25 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 Gene3D G3DSA:3.30.470.20 195 356 7.9E-56 T 11-10-2018 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 SUPERFAMILY SSF51621 461 788 1.47E-94 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 SUPERFAMILY SSF56059 3 384 7.3E-104 T 11-10-2018 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 344 2.4E-114 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 XFUD_05330 3c082af12c6b104e9c217361575d12c2 791 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 788 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 XFUD_05755 1ecf0e638bb85ae378c686314b73969e 308 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 2 296 48.108 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 XFUD_05755 1ecf0e638bb85ae378c686314b73969e 308 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XFUD_05755 1ecf0e638bb85ae378c686314b73969e 308 Pfam PF05175 Methyltransferase small domain 130 213 2.4E-13 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 XFUD_05755 1ecf0e638bb85ae378c686314b73969e 308 PIRSF PIRSF037167 1 303 1.6E-122 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 XFUD_05755 1ecf0e638bb85ae378c686314b73969e 308 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 291 5.0E-67 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 XFUD_05755 1ecf0e638bb85ae378c686314b73969e 308 SUPERFAMILY SSF53335 12 289 1.05E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_05755 1ecf0e638bb85ae378c686314b73969e 308 Gene3D G3DSA:1.10.8.10 11 101 3.1E-8 T 11-10-2018 XFUD_05755 1ecf0e638bb85ae378c686314b73969e 308 Gene3D G3DSA:3.40.50.150 105 283 2.3E-38 T 11-10-2018 XFUD_05755 1ecf0e638bb85ae378c686314b73969e 308 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 9 290 4.0E-114 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 XFUD_03410 87ef987e0a0c6092b98b3ea7741d721f 278 Pfam PF08478 POTRA domain, FtsQ-type 35 103 5.6E-17 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type XFUD_03410 87ef987e0a0c6092b98b3ea7741d721f 278 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 4 227 22.688 T 11-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 XFUD_03410 87ef987e0a0c6092b98b3ea7741d721f 278 Gene3D G3DSA:3.40.50.11690 104 231 6.1E-33 T 11-10-2018 XFUD_03410 87ef987e0a0c6092b98b3ea7741d721f 278 Pfam PF03799 Cell division protein FtsQ 107 219 1.2E-18 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB XFUD_03410 87ef987e0a0c6092b98b3ea7741d721f 278 Gene3D G3DSA:3.10.20.310 33 103 5.5E-21 T 11-10-2018 XFUD_10205 e0c84fd5adf5e5a365e822d5bab77ddb 167 TIGRFAM TIGR00086 smpB: SsrA-binding protein 19 160 5.4E-51 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 XFUD_10205 e0c84fd5adf5e5a365e822d5bab77ddb 167 Gene3D G3DSA:2.40.280.10 11 140 4.0E-44 T 11-10-2018 IPR023620 Small protein B XFUD_10205 e0c84fd5adf5e5a365e822d5bab77ddb 167 ProSitePatterns PS01317 SsrA-binding protein. 37 49 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site XFUD_10205 e0c84fd5adf5e5a365e822d5bab77ddb 167 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 19 143 3.0E-68 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 XFUD_10205 e0c84fd5adf5e5a365e822d5bab77ddb 167 SUPERFAMILY SSF74982 13 143 1.09E-48 T 11-10-2018 IPR023620 Small protein B XFUD_10205 e0c84fd5adf5e5a365e822d5bab77ddb 167 Hamap MF_00023 SsrA-binding protein [smpB]. 1 166 69.072 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 XFUD_10205 e0c84fd5adf5e5a365e822d5bab77ddb 167 Pfam PF01668 SmpB protein 19 161 4.1E-56 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 XFUD_04520 cc364dd9573ed48c78b36329b9debf8e 239 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 225 2.8E-44 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 XFUD_04520 cc364dd9573ed48c78b36329b9debf8e 239 SUPERFAMILY SSF100950 10 232 3.05E-44 T 11-10-2018 IPR037171 NagB/RpiA transferase-like XFUD_04520 cc364dd9573ed48c78b36329b9debf8e 239 Gene3D G3DSA:3.40.50.1360 6 239 2.5E-51 T 11-10-2018 XFUD_08560 8008efa27bf37dfb68f8b5d0c6b7d1cb 527 SUPERFAMILY SSF53927 220 527 3.51E-126 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XFUD_08560 8008efa27bf37dfb68f8b5d0c6b7d1cb 527 SMART SM00798 138 459 1.3E-194 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFUD_08560 8008efa27bf37dfb68f8b5d0c6b7d1cb 527 Pfam PF02142 MGS-like domain 20 132 1.7E-23 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain XFUD_08560 8008efa27bf37dfb68f8b5d0c6b7d1cb 527 PIRSF PIRSF000414 3 527 3.3E-212 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFUD_08560 8008efa27bf37dfb68f8b5d0c6b7d1cb 527 Gene3D G3DSA:3.40.140.20 392 527 5.2E-59 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFUD_08560 8008efa27bf37dfb68f8b5d0c6b7d1cb 527 Gene3D G3DSA:3.40.50.1380 2 202 2.1E-78 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XFUD_08560 8008efa27bf37dfb68f8b5d0c6b7d1cb 527 Gene3D G3DSA:3.40.140.20 218 373 2.2E-56 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFUD_08560 8008efa27bf37dfb68f8b5d0c6b7d1cb 527 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 458 1.2E-114 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFUD_08560 8008efa27bf37dfb68f8b5d0c6b7d1cb 527 SMART SM00851 20 133 6.2E-49 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain XFUD_08560 8008efa27bf37dfb68f8b5d0c6b7d1cb 527 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 10 527 3.4E-218 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFUD_08560 8008efa27bf37dfb68f8b5d0c6b7d1cb 527 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 527 43.877 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 XFUD_08560 8008efa27bf37dfb68f8b5d0c6b7d1cb 527 SUPERFAMILY SSF52335 8 198 2.49E-64 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 SMART SM00228 299 381 3.5E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 SMART SM00228 418 503 7.1 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 Gene3D G3DSA:2.30.42.10 294 400 6.7E-25 T 11-10-2018 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 SUPERFAMILY SSF50156 257 382 4.6E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 Gene3D G3DSA:2.30.42.10 422 513 1.2E-7 T 11-10-2018 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 55 509 1.0E-157 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 Pfam PF13180 PDZ domain 301 390 8.2E-15 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 PRINTS PR00834 HtrA/DegQ protease family signature 156 176 1.6E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 PRINTS PR00834 HtrA/DegQ protease family signature 196 220 1.6E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 PRINTS PR00834 HtrA/DegQ protease family signature 231 248 1.6E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 PRINTS PR00834 HtrA/DegQ protease family signature 253 270 1.6E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 PRINTS PR00834 HtrA/DegQ protease family signature 135 147 1.6E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 PRINTS PR00834 HtrA/DegQ protease family signature 339 351 1.6E-49 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 SUPERFAMILY SSF50156 444 510 9.99E-6 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 SUPERFAMILY SSF50494 53 291 2.38E-66 T 11-10-2018 IPR009003 Peptidase S1, PA clan XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 Gene3D G3DSA:2.40.10.120 54 292 8.1E-82 T 11-10-2018 XFUD_09770 597df7c215e53e4923fbb9af2cd43aa6 514 Pfam PF13365 Trypsin-like peptidase domain 126 260 1.8E-35 T 11-10-2018 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 SUPERFAMILY SSF46589 930 994 3.77E-16 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 930 994 6.6E-19 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 Gene3D G3DSA:1.10.730.10 612 863 1.9E-65 T 11-10-2018 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 SUPERFAMILY SSF52374 2 672 1.94E-125 T 11-10-2018 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 976 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 662 5.7E-190 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 994 15.398 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 Gene3D G3DSA:3.90.740.10 200 391 3.6E-45 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 Gene3D G3DSA:3.40.50.620 392 611 1.3E-57 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 Pfam PF08264 Anticodon-binding domain of tRNA 718 869 2.2E-39 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 SUPERFAMILY SSF47323 673 945 6.73E-58 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 4.7E-30 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 PRINTS PR00986 Valyl-tRNA synthetase signature 251 268 4.7E-30 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 PRINTS PR00986 Valyl-tRNA synthetase signature 502 523 4.7E-30 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 PRINTS PR00986 Valyl-tRNA synthetase signature 537 555 4.7E-30 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 SUPERFAMILY SSF50677 195 398 1.83E-50 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 Gene3D G3DSA:1.10.287.380 923 994 3.0E-21 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 XFUD_00545 7e48a1a9dd48db5e627e90fa2274d451 994 Gene3D G3DSA:3.40.50.620 5 199 8.3E-59 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_01150 82b3c30cead20e5abe47fba2a0b1f6d5 395 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 27 385 4.5E-135 T 11-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB XFUD_01150 82b3c30cead20e5abe47fba2a0b1f6d5 395 Gene3D G3DSA:1.20.1250.20 16 205 1.8E-8 T 11-10-2018 XFUD_01150 82b3c30cead20e5abe47fba2a0b1f6d5 395 SUPERFAMILY SSF103473 17 382 2.35E-32 T 11-10-2018 IPR036259 MFS transporter superfamily XFUD_01150 82b3c30cead20e5abe47fba2a0b1f6d5 395 Gene3D G3DSA:1.20.1250.20 212 391 3.5E-15 T 11-10-2018 XFUD_07770 329fcab6842d74d134cc9786f1a9f04d 260 Gene3D G3DSA:3.40.50.10090 17 246 7.2E-39 T 11-10-2018 XFUD_07770 329fcab6842d74d134cc9786f1a9f04d 260 Gene3D G3DSA:3.40.50.10090 45 171 7.2E-39 T 11-10-2018 XFUD_07770 329fcab6842d74d134cc9786f1a9f04d 260 Pfam PF02602 Uroporphyrinogen-III synthase HemD 28 221 2.2E-21 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_07770 329fcab6842d74d134cc9786f1a9f04d 260 SUPERFAMILY SSF69618 14 250 3.79E-42 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 XFUD_11170 9f219ac4328efe88a6f7f9242ad70608 243 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 39 225 3.3E-68 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 XFUD_11170 9f219ac4328efe88a6f7f9242ad70608 243 Gene3D G3DSA:3.30.1400.10 94 232 3.7E-38 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 XFUD_11170 9f219ac4328efe88a6f7f9242ad70608 243 SMART SM00771 95 225 1.9E-59 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 XFUD_11170 9f219ac4328efe88a6f7f9242ad70608 243 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 98 226 8.0E-71 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 XFUD_11170 9f219ac4328efe88a6f7f9242ad70608 243 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 98 223 3.1E-36 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 XFUD_11170 9f219ac4328efe88a6f7f9242ad70608 243 Hamap MF_00509 Cell division protein ZipA [zipA]. 5 227 17.665 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 XFUD_11170 9f219ac4328efe88a6f7f9242ad70608 243 SUPERFAMILY SSF64383 95 231 1.44E-34 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 XFUD_03860 e4b8926ce3032c5b529a807a44d4171d 293 Pfam PF03471 Transporter associated domain 210 284 1.5E-22 T 11-10-2018 IPR005170 Transporter-associated domain XFUD_03860 e4b8926ce3032c5b529a807a44d4171d 293 SUPERFAMILY SSF56176 206 291 2.64E-25 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XFUD_03860 e4b8926ce3032c5b529a807a44d4171d 293 SMART SM01091 208 286 4.1E-29 T 11-10-2018 IPR005170 Transporter-associated domain XFUD_03860 e4b8926ce3032c5b529a807a44d4171d 293 Gene3D G3DSA:3.90.1280.20 139 196 4.9E-29 T 11-10-2018 XFUD_03860 e4b8926ce3032c5b529a807a44d4171d 293 Gene3D G3DSA:3.30.465.10 197 285 5.2E-28 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XFUD_03860 e4b8926ce3032c5b529a807a44d4171d 293 SUPERFAMILY SSF54631 67 204 2.2E-30 T 11-10-2018 XFUD_03860 e4b8926ce3032c5b529a807a44d4171d 293 Pfam PF00571 CBS domain 141 190 3.1E-5 T 11-10-2018 IPR000644 CBS domain XFUD_03860 e4b8926ce3032c5b529a807a44d4171d 293 Pfam PF00571 CBS domain 70 125 6.7E-7 T 11-10-2018 IPR000644 CBS domain XFUD_03860 e4b8926ce3032c5b529a807a44d4171d 293 Gene3D G3DSA:3.90.1280.20 79 138 1.2E-20 T 11-10-2018 XFUD_03860 e4b8926ce3032c5b529a807a44d4171d 293 SMART SM00116 79 128 0.17 T 11-10-2018 IPR000644 CBS domain XFUD_03860 e4b8926ce3032c5b529a807a44d4171d 293 SMART SM00116 142 190 6.4 T 11-10-2018 IPR000644 CBS domain XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 SMART SM00388 214 278 5.8E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 SUPERFAMILY SSF47384 201 278 9.81E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 429 5.5E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 430 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 Gene3D G3DSA:1.10.287.130 209 279 8.4E-24 T 11-10-2018 XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 SMART SM00387 321 433 1.8E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 SUPERFAMILY SSF55785 91 166 2.38E-6 T 11-10-2018 IPR035965 PAS domain superfamily XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 SUPERFAMILY SSF55874 267 429 1.96E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 Pfam PF13188 PAS domain 107 157 2.1E-4 T 11-10-2018 IPR000014 PAS domain XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 Gene3D G3DSA:3.30.565.10 280 439 4.2E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 Pfam PF11808 Domain of unknown function (DUF3329) 14 97 2.2E-17 T 11-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 277 8.1E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_11310 ab50c7c6a346de90f9281bc7df71fd22 446 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 102 429 1.7E-121 T 11-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 XFUD_04560 d30d6e8ef17634ae9c92dec25e743170 596 Gene3D G3DSA:3.90.700.10 250 353 2.3E-167 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04560 d30d6e8ef17634ae9c92dec25e743170 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 596 1.5E-43 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04560 d30d6e8ef17634ae9c92dec25e743170 596 Gene3D G3DSA:4.10.80.40 548 596 1.5E-10 T 11-10-2018 XFUD_04560 d30d6e8ef17634ae9c92dec25e743170 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 46 55 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04560 d30d6e8ef17634ae9c92dec25e743170 596 SUPERFAMILY SSF56425 240 358 3.59E-43 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04560 d30d6e8ef17634ae9c92dec25e743170 596 SUPERFAMILY SSF46977 454 596 2.75E-50 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04560 d30d6e8ef17634ae9c92dec25e743170 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 12 596 2.7E-241 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04560 d30d6e8ef17634ae9c92dec25e743170 596 Gene3D G3DSA:3.50.50.60 12 419 2.3E-167 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_04560 d30d6e8ef17634ae9c92dec25e743170 596 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 9 596 4.8E-287 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04560 d30d6e8ef17634ae9c92dec25e743170 596 SUPERFAMILY SSF51905 4 440 4.99E-77 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_04560 d30d6e8ef17634ae9c92dec25e743170 596 PIRSF PIRSF000171 1 585 4.5E-38 T 11-10-2018 XFUD_04560 d30d6e8ef17634ae9c92dec25e743170 596 Gene3D G3DSA:1.20.58.100 437 547 3.3E-37 T 11-10-2018 XFUD_04560 d30d6e8ef17634ae9c92dec25e743170 596 Pfam PF00890 FAD binding domain 12 408 9.4E-122 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_00010 486c1a177d76ef84e2454f53d63e89f7 366 SMART SM00480 17 362 2.7E-131 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 XFUD_00010 486c1a177d76ef84e2454f53d63e89f7 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 3.5E-36 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 XFUD_00010 486c1a177d76ef84e2454f53d63e89f7 366 SUPERFAMILY SSF55979 246 366 1.78E-32 T 11-10-2018 XFUD_00010 486c1a177d76ef84e2454f53d63e89f7 366 Gene3D G3DSA:3.10.150.10 1 121 7.6E-40 T 11-10-2018 XFUD_00010 486c1a177d76ef84e2454f53d63e89f7 366 SUPERFAMILY SSF55979 127 244 4.65E-27 T 11-10-2018 XFUD_00010 486c1a177d76ef84e2454f53d63e89f7 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 365 1.1E-33 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 XFUD_00010 486c1a177d76ef84e2454f53d63e89f7 366 Gene3D G3DSA:3.10.150.10 122 248 4.2E-37 T 11-10-2018 XFUD_00010 486c1a177d76ef84e2454f53d63e89f7 366 Gene3D G3DSA:3.10.150.10 249 366 7.9E-36 T 11-10-2018 XFUD_00010 486c1a177d76ef84e2454f53d63e89f7 366 PIRSF PIRSF000804 1 366 1.0E-116 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 XFUD_00010 486c1a177d76ef84e2454f53d63e89f7 366 SUPERFAMILY SSF55979 1 116 5.83E-27 T 11-10-2018 XFUD_00010 486c1a177d76ef84e2454f53d63e89f7 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 6.2E-35 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 XFUD_00010 486c1a177d76ef84e2454f53d63e89f7 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.2E-106 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 XFUD_10635 e5db917b1852d37233ffba5f7968c1ba 476 Gene3D G3DSA:3.30.70.1560 152 247 8.6E-47 T 11-10-2018 XFUD_10635 e5db917b1852d37233ffba5f7968c1ba 476 SUPERFAMILY SSF55120 86 263 1.06E-37 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_10635 e5db917b1852d37233ffba5f7968c1ba 476 SMART SM00363 27 85 9.8E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_10635 e5db917b1852d37233ffba5f7968c1ba 476 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 128 142 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 XFUD_10635 e5db917b1852d37233ffba5f7968c1ba 476 Pfam PF00849 RNA pseudouridylate synthase 90 225 6.1E-16 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_10635 e5db917b1852d37233ffba5f7968c1ba 476 Gene3D G3DSA:3.10.290.10 23 79 4.2E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XFUD_10635 e5db917b1852d37233ffba5f7968c1ba 476 SUPERFAMILY SSF55174 25 113 4.56E-17 T 11-10-2018 XFUD_10635 e5db917b1852d37233ffba5f7968c1ba 476 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 94 258 1.5E-50 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 XFUD_10635 e5db917b1852d37233ffba5f7968c1ba 476 Pfam PF01479 S4 domain 27 72 5.3E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_10635 e5db917b1852d37233ffba5f7968c1ba 476 Gene3D G3DSA:3.30.70.580 92 254 8.6E-47 T 11-10-2018 XFUD_03545 5c3c7fc59f9b223ebe08c1eae2206088 464 Pfam PF09312 SurA N-terminal domain 33 150 1.9E-44 T 11-10-2018 IPR015391 SurA N-terminal XFUD_03545 5c3c7fc59f9b223ebe08c1eae2206088 464 Gene3D G3DSA:3.10.50.40 290 395 2.2E-66 T 11-10-2018 XFUD_03545 5c3c7fc59f9b223ebe08c1eae2206088 464 SUPERFAMILY SSF54534 292 393 8.5E-26 T 11-10-2018 XFUD_03545 5c3c7fc59f9b223ebe08c1eae2206088 464 Gene3D G3DSA:3.10.50.40 179 396 2.2E-66 T 11-10-2018 XFUD_03545 5c3c7fc59f9b223ebe08c1eae2206088 464 SUPERFAMILY SSF54534 177 280 8.5E-24 T 11-10-2018 XFUD_03545 5c3c7fc59f9b223ebe08c1eae2206088 464 Gene3D G3DSA:1.10.4030.10 30 153 5.3E-34 T 11-10-2018 XFUD_03545 5c3c7fc59f9b223ebe08c1eae2206088 464 Hamap MF_01183 Chaperone SurA [surA]. 9 437 30.287 T 11-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 XFUD_03545 5c3c7fc59f9b223ebe08c1eae2206088 464 SUPERFAMILY SSF109998 33 205 7.19E-41 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily XFUD_03545 5c3c7fc59f9b223ebe08c1eae2206088 464 Pfam PF00639 PPIC-type PPIASE domain 299 389 3.9E-25 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 XFUD_03545 5c3c7fc59f9b223ebe08c1eae2206088 464 Pfam PF00639 PPIC-type PPIASE domain 182 276 3.4E-18 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 XFUD_08230 6f429e2b84823fcc53981a5f4933910e 141 SUPERFAMILY SSF54637 7 137 2.39E-34 T 11-10-2018 IPR029069 HotDog domain superfamily XFUD_08230 6f429e2b84823fcc53981a5f4933910e 141 PIRSF PIRSF003230 1 140 5.8E-38 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 XFUD_08230 6f429e2b84823fcc53981a5f4933910e 141 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 9 132 9.7E-46 T 11-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 XFUD_08230 6f429e2b84823fcc53981a5f4933910e 141 Gene3D G3DSA:3.10.129.10 1 138 3.7E-32 T 11-10-2018 XFUD_08230 6f429e2b84823fcc53981a5f4933910e 141 Pfam PF03061 Thioesterase superfamily 24 107 6.9E-17 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 XFUD_08230 6f429e2b84823fcc53981a5f4933910e 141 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 13 127 1.4E-27 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 XFUD_05090 3001268b82946bafc6014574e4bfb06b 346 Gene3D G3DSA:1.10.620.20 26 317 2.6E-78 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 XFUD_05090 3001268b82946bafc6014574e4bfb06b 346 SUPERFAMILY SSF47240 22 346 3.36E-85 T 11-10-2018 IPR009078 Ferritin-like superfamily XFUD_05090 3001268b82946bafc6014574e4bfb06b 346 Pfam PF00268 Ribonucleotide reductase, small chain 31 304 2.8E-68 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFUD_05090 3001268b82946bafc6014574e4bfb06b 346 PIRSF PIRSF000355 1 346 1.0E-112 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:1.10.150.20 435 494 1.5E-15 T 11-10-2018 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:3.30.300.20 282 351 8.0E-25 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF50249 135 203 4.18E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:1.10.150.20 356 425 2.2E-27 T 11-10-2018 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 Pfam PF13184 NusA-like KH domain 234 301 1.1E-27 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 29.335 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 2.7E-124 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:3.30.1480.10 1 133 3.4E-39 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 SMART SM00322 305 368 0.025 T 11-10-2018 IPR004087 K Homology domain GO:0003676 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 SMART SM00322 234 297 18.0 T 11-10-2018 IPR004087 K Homology domain GO:0003676 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 Pfam PF08529 NusA N-terminal domain 4 128 3.6E-34 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF47794 361 419 2.04E-15 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 Pfam PF14520 Helix-hairpin-helix domain 437 492 1.7E-4 T 11-10-2018 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF47794 434 493 2.35E-7 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:3.30.300.20 203 281 7.5E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 Gene3D G3DSA:2.40.50.140 139 202 1.8E-20 T 11-10-2018 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 5.5E-22 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF69705 1 130 1.09E-35 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF54814 205 282 1.63E-29 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 SUPERFAMILY SSF54814 283 346 1.31E-14 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 Pfam PF00575 S1 RNA binding domain 137 199 4.6E-9 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFUD_01005 75d14377d20abddb16e08dd9005b6e59 503 SMART SM00316 137 204 1.6E-9 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFUD_09630 c8a89ca376f3cfe67bc71cce3051065f 188 Gene3D G3DSA:2.60.120.10 2 157 1.1E-50 T 11-10-2018 IPR014710 RmlC-like jelly roll fold XFUD_09630 c8a89ca376f3cfe67bc71cce3051065f 188 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.032 T 11-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 XFUD_09630 c8a89ca376f3cfe67bc71cce3051065f 188 Pfam PF03079 ARD/ARD' family 4 164 1.1E-33 T 11-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 XFUD_09630 c8a89ca376f3cfe67bc71cce3051065f 188 SUPERFAMILY SSF51182 3 179 4.29E-40 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily XFUD_04530 96d93a4198175137acb4febb02c1228c 477 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 3 465 1.1E-134 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFUD_04530 96d93a4198175137acb4febb02c1228c 477 PIRSF PIRSF000110 1 470 3.9E-156 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFUD_04530 96d93a4198175137acb4febb02c1228c 477 SUPERFAMILY SSF51735 3 179 9.25E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_04530 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 156 184 3.7E-40 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFUD_04530 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 226 242 3.7E-40 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFUD_04530 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 132 145 3.7E-40 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFUD_04530 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 208 225 3.7E-40 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFUD_04530 96d93a4198175137acb4febb02c1228c 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 313 339 3.7E-40 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFUD_04530 96d93a4198175137acb4febb02c1228c 477 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 7 176 2.3E-41 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFUD_04530 96d93a4198175137acb4febb02c1228c 477 Gene3D G3DSA:3.30.360.10 166 461 5.9E-141 T 11-10-2018 XFUD_04530 96d93a4198175137acb4febb02c1228c 477 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 179 465 1.8E-94 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFUD_04530 96d93a4198175137acb4febb02c1228c 477 SUPERFAMILY SSF55347 171 468 2.62E-97 T 11-10-2018 XFUD_04530 96d93a4198175137acb4febb02c1228c 477 Gene3D G3DSA:3.40.50.720 5 422 5.9E-141 T 11-10-2018 XFUD_04530 96d93a4198175137acb4febb02c1228c 477 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 2 474 66.699 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 XFUD_09635 777a5f4fe18764e05b651dbb996fc86d 232 SUPERFAMILY SSF56784 1 230 3.31E-57 T 11-10-2018 IPR036412 HAD-like superfamily XFUD_09635 777a5f4fe18764e05b651dbb996fc86d 232 Gene3D G3DSA:1.10.720.60 18 99 3.2E-70 T 11-10-2018 XFUD_09635 777a5f4fe18764e05b651dbb996fc86d 232 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 3 227 40.6 T 11-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 XFUD_09635 777a5f4fe18764e05b651dbb996fc86d 232 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 6 213 3.1E-76 T 11-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 XFUD_09635 777a5f4fe18764e05b651dbb996fc86d 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 117 197 1.3E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 XFUD_09635 777a5f4fe18764e05b651dbb996fc86d 232 Gene3D G3DSA:3.40.50.1000 6 213 3.2E-70 T 11-10-2018 IPR023214 HAD superfamily XFUD_01215 610a569f6c3d272a4687c10fcf4bf421 298 Gene3D G3DSA:3.40.50.720 1 285 1.7E-74 T 11-10-2018 XFUD_01215 610a569f6c3d272a4687c10fcf4bf421 298 Pfam PF08338 Domain of unknown function (DUF1731) 249 294 1.5E-14 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 XFUD_01215 610a569f6c3d272a4687c10fcf4bf421 298 SUPERFAMILY SSF51735 1 292 1.93E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_01215 610a569f6c3d272a4687c10fcf4bf421 298 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 4 291 6.5E-98 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 XFUD_01215 610a569f6c3d272a4687c10fcf4bf421 298 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 221 1.9E-17 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 XFUD_10100 26c93f3cac629419c00c49a0fe070ba5 374 SUPERFAMILY SSF48600 18 107 3.51E-20 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFUD_10100 26c93f3cac629419c00c49a0fe070ba5 374 SMART SM00830 23 104 2.0E-29 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFUD_10100 26c93f3cac629419c00c49a0fe070ba5 374 Pfam PF01842 ACT domain 292 357 1.4E-10 T 11-10-2018 IPR002912 ACT domain XFUD_10100 26c93f3cac629419c00c49a0fe070ba5 374 Pfam PF01817 Chorismate mutase type II 23 102 4.9E-21 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFUD_10100 26c93f3cac629419c00c49a0fe070ba5 374 TIGRFAM TIGR01807 CM_P2: chorismate mutase 19 94 6.3E-24 T 11-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 XFUD_10100 26c93f3cac629419c00c49a0fe070ba5 374 PIRSF PIRSF001500 12 374 5.1E-145 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 XFUD_10100 26c93f3cac629419c00c49a0fe070ba5 374 SUPERFAMILY SSF53850 105 288 7.49E-51 T 11-10-2018 XFUD_10100 26c93f3cac629419c00c49a0fe070ba5 374 Gene3D G3DSA:3.30.70.260 283 373 1.1E-29 T 11-10-2018 XFUD_10100 26c93f3cac629419c00c49a0fe070ba5 374 SUPERFAMILY SSF55021 276 370 3.05E-28 T 11-10-2018 XFUD_10100 26c93f3cac629419c00c49a0fe070ba5 374 Gene3D G3DSA:1.20.59.10 21 105 3.8E-27 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFUD_10100 26c93f3cac629419c00c49a0fe070ba5 374 Gene3D G3DSA:3.40.190.10 108 279 2.1E-52 T 11-10-2018 XFUD_10100 26c93f3cac629419c00c49a0fe070ba5 374 Gene3D G3DSA:3.40.190.10 186 271 2.1E-52 T 11-10-2018 XFUD_10100 26c93f3cac629419c00c49a0fe070ba5 374 Pfam PF00800 Prephenate dehydratase 106 282 9.5E-59 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 XFUD_06985 7a0760fd04b13a160e00755f589c62f0 547 Gene3D G3DSA:3.90.320.10 6 195 1.0E-19 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal XFUD_06985 7a0760fd04b13a160e00755f589c62f0 547 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 6 153 4.6E-21 T 11-10-2018 IPR017482 Putative phage-type endonuclease XFUD_06985 7a0760fd04b13a160e00755f589c62f0 547 Pfam PF09588 YqaJ-like viral recombinase domain 12 147 1.7E-10 T 11-10-2018 IPR019080 YqaJ viral recombinase XFUD_06985 7a0760fd04b13a160e00755f589c62f0 547 SUPERFAMILY SSF52980 1 154 5.25E-20 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XFUD_06985 7a0760fd04b13a160e00755f589c62f0 547 PIRSF PIRSF028503 1 547 0.0 T 11-10-2018 IPR016889 Uncharacterised conserved protein UCP028503 XFUD_06555 4bf9efedd349f5977ae9ea31e36af51e 942 Pfam PF00676 Dehydrogenase E1 component 209 516 8.7E-52 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 XFUD_06555 4bf9efedd349f5977ae9ea31e36af51e 942 Gene3D G3DSA:1.10.287.1150 78 161 1.7E-21 T 11-10-2018 XFUD_06555 4bf9efedd349f5977ae9ea31e36af51e 942 PIRSF PIRSF000157 2 934 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 XFUD_06555 4bf9efedd349f5977ae9ea31e36af51e 942 Pfam PF02779 Transketolase, pyrimidine binding domain 595 788 2.4E-62 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XFUD_06555 4bf9efedd349f5977ae9ea31e36af51e 942 SUPERFAMILY SSF52518 577 794 1.86E-52 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFUD_06555 4bf9efedd349f5977ae9ea31e36af51e 942 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 932 1.0E-51 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 XFUD_06555 4bf9efedd349f5977ae9ea31e36af51e 942 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 XFUD_06555 4bf9efedd349f5977ae9ea31e36af51e 942 Gene3D G3DSA:3.40.50.970 162 529 5.9E-146 T 11-10-2018 XFUD_06555 4bf9efedd349f5977ae9ea31e36af51e 942 SUPERFAMILY SSF52518 117 542 2.22E-85 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFUD_06555 4bf9efedd349f5977ae9ea31e36af51e 942 SMART SM00861 594 787 2.6E-53 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain XFUD_06555 4bf9efedd349f5977ae9ea31e36af51e 942 Gene3D G3DSA:3.40.50.12470 557 803 8.3E-165 T 11-10-2018 XFUD_06555 4bf9efedd349f5977ae9ea31e36af51e 942 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 11 49 5.5E-16 T 11-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 XFUD_06555 4bf9efedd349f5977ae9ea31e36af51e 942 Gene3D G3DSA:3.40.50.11610 724 929 8.3E-165 T 11-10-2018 XFUD_11070 35b50d251c62ba148e5da02a91007d03 287 Gene3D G3DSA:1.20.120.1220 128 281 1.2E-5 T 11-10-2018 XFUD_11070 35b50d251c62ba148e5da02a91007d03 287 Pfam PF01478 Type IV leader peptidase family 133 241 1.1E-22 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 XFUD_11070 35b50d251c62ba148e5da02a91007d03 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 210 221 2.4E-18 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XFUD_11070 35b50d251c62ba148e5da02a91007d03 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 222 237 2.4E-18 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XFUD_11070 35b50d251c62ba148e5da02a91007d03 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 142 159 2.4E-18 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XFUD_11070 35b50d251c62ba148e5da02a91007d03 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 199 209 2.4E-18 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial XFUD_11070 35b50d251c62ba148e5da02a91007d03 287 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 18 123 1.9E-26 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal XFUD_06205 be6701ea42ea99a857a098866f5b2488 416 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 18 415 8.4E-176 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 XFUD_06205 be6701ea42ea99a857a098866f5b2488 416 Gene3D G3DSA:3.90.1150.10 20 408 2.4E-160 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFUD_06205 be6701ea42ea99a857a098866f5b2488 416 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 227 246 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site XFUD_06205 be6701ea42ea99a857a098866f5b2488 416 PIRSF PIRSF005572 33 414 2.3E-48 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 XFUD_06205 be6701ea42ea99a857a098866f5b2488 416 Gene3D G3DSA:3.40.640.10 47 306 2.4E-160 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFUD_06205 be6701ea42ea99a857a098866f5b2488 416 SUPERFAMILY SSF53383 15 413 9.59E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFUD_06205 be6701ea42ea99a857a098866f5b2488 416 Pfam PF00266 Aminotransferase class-V 36 404 1.7E-146 T 11-10-2018 IPR000192 Aminotransferase class V domain XFUD_01905 3ce1910c168a100162462089bca2047c 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 XFUD_01905 3ce1910c168a100162462089bca2047c 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.616 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFUD_01905 3ce1910c168a100162462089bca2047c 141 SUPERFAMILY SSF54919 1 138 2.75E-54 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFUD_01905 3ce1910c168a100162462089bca2047c 141 SMART SM00562 3 140 7.4E-80 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFUD_01905 3ce1910c168a100162462089bca2047c 141 Gene3D G3DSA:3.30.70.141 1 140 1.2E-53 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFUD_01905 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 5.7E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFUD_01905 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 5.7E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFUD_01905 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 5.7E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFUD_01905 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 5.7E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFUD_01905 3ce1910c168a100162462089bca2047c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 5.7E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFUD_01905 3ce1910c168a100162462089bca2047c 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.6E-52 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 XFUD_02125 70719a8d65ac1cce63289a04106dc165 699 Gene3D G3DSA:3.40.50.300 3 224 3.2E-6 T 11-10-2018 XFUD_02125 70719a8d65ac1cce63289a04106dc165 699 Pfam PF05876 Phage terminase large subunit (GpA) 47 634 2.1E-168 T 11-10-2018 IPR008866 Bacteriophage lambda, GpA XFUD_05775 29c0cac7970e21102f893906406c2d19 256 SUPERFAMILY SSF55120 1 250 6.47E-80 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_05775 29c0cac7970e21102f893906406c2d19 256 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 238 3.2E-56 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_05775 29c0cac7970e21102f893906406c2d19 256 Gene3D G3DSA:3.30.70.660 106 241 2.0E-44 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 XFUD_05775 29c0cac7970e21102f893906406c2d19 256 Gene3D G3DSA:3.30.70.580 1 105 5.2E-31 T 11-10-2018 XFUD_05775 29c0cac7970e21102f893906406c2d19 256 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 244 30.421 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_05775 29c0cac7970e21102f893906406c2d19 256 Pfam PF01416 tRNA pseudouridine synthase 143 244 1.1E-25 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_05775 29c0cac7970e21102f893906406c2d19 256 PIRSF PIRSF001430 1 253 1.4E-64 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_09790 2359c8b18f8e57a827cefbbf91826b52 226 Pfam PF00035 Double-stranded RNA binding motif 155 222 2.8E-13 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain XFUD_09790 2359c8b18f8e57a827cefbbf91826b52 226 Gene3D G3DSA:3.30.160.20 153 225 1.8E-22 T 11-10-2018 XFUD_09790 2359c8b18f8e57a827cefbbf91826b52 226 SMART SM00358 155 223 1.5E-18 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain XFUD_09790 2359c8b18f8e57a827cefbbf91826b52 226 SUPERFAMILY SSF54768 108 222 1.23E-29 T 11-10-2018 XFUD_09790 2359c8b18f8e57a827cefbbf91826b52 226 SMART SM00535 20 148 1.2E-49 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 XFUD_09790 2359c8b18f8e57a827cefbbf91826b52 226 Gene3D G3DSA:1.10.1520.10 1 146 1.6E-40 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 XFUD_09790 2359c8b18f8e57a827cefbbf91826b52 226 SUPERFAMILY SSF69065 5 157 4.19E-45 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 XFUD_09790 2359c8b18f8e57a827cefbbf91826b52 226 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 XFUD_09790 2359c8b18f8e57a827cefbbf91826b52 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 28.274 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 XFUD_09790 2359c8b18f8e57a827cefbbf91826b52 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 222 4.5E-73 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 XFUD_09790 2359c8b18f8e57a827cefbbf91826b52 226 Pfam PF14622 Ribonuclease-III-like 18 137 1.6E-31 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 XFUD_02365 788a04e88479e090368e2e1377b77fa6 140 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 137 18.045 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 XFUD_02365 788a04e88479e090368e2e1377b77fa6 140 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 79 3.0E-30 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 XFUD_02365 788a04e88479e090368e2e1377b77fa6 140 Pfam PF02416 mttA/Hcf106 family 4 37 8.7E-7 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 XFUD_02365 788a04e88479e090368e2e1377b77fa6 140 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 9.2E-21 T 11-10-2018 XFUD_02365 788a04e88479e090368e2e1377b77fa6 140 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 9.2E-21 T 11-10-2018 XFUD_02365 788a04e88479e090368e2e1377b77fa6 140 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 9.2E-21 T 11-10-2018 XFUD_02995 bc3027626499b6e76cff20564811b261 193 SUPERFAMILY SSF46955 26 77 2.56E-8 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFUD_02995 bc3027626499b6e76cff20564811b261 193 Gene3D G3DSA:1.10.10.10 23 90 5.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_02995 bc3027626499b6e76cff20564811b261 193 Pfam PF07471 Phage DNA packaging protein Nu1 23 172 7.1E-53 T 11-10-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit XFUD_10870 bc3027626499b6e76cff20564811b261 193 SUPERFAMILY SSF46955 26 77 2.56E-8 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFUD_10870 bc3027626499b6e76cff20564811b261 193 Gene3D G3DSA:1.10.10.10 23 90 5.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_10870 bc3027626499b6e76cff20564811b261 193 Pfam PF07471 Phage DNA packaging protein Nu1 23 172 7.1E-53 T 11-10-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit XFUD_04305 45ee639f5291798d936b3c6f5d8c010e 415 Gene3D G3DSA:3.40.605.10 16 409 1.6E-156 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 XFUD_04305 45ee639f5291798d936b3c6f5d8c010e 415 PIRSF PIRSF000151 1 415 3.9E-170 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 XFUD_04305 45ee639f5291798d936b3c6f5d8c010e 415 Pfam PF00171 Aldehyde dehydrogenase family 6 281 1.2E-12 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 XFUD_04305 45ee639f5291798d936b3c6f5d8c010e 415 Gene3D G3DSA:3.40.309.10 224 372 1.6E-156 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 XFUD_04305 45ee639f5291798d936b3c6f5d8c010e 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 40.443 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XFUD_04305 45ee639f5291798d936b3c6f5d8c010e 415 SUPERFAMILY SSF53720 2 414 1.26E-109 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XFUD_04305 45ee639f5291798d936b3c6f5d8c010e 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 12 402 4.5E-137 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XFUD_04305 45ee639f5291798d936b3c6f5d8c010e 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 XFUD_08310 3e571efae48bbbce75fc5ecb1410c39d 231 SUPERFAMILY SSF48613 3 218 5.09E-30 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 XFUD_08310 3e571efae48bbbce75fc5ecb1410c39d 231 Gene3D G3DSA:1.20.910.10 4 228 5.2E-52 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 XFUD_08310 3e571efae48bbbce75fc5ecb1410c39d 231 Pfam PF14518 Iron-containing redox enzyme 42 203 2.5E-19 T 11-10-2018 XFUD_07360 17e054d48b98b59d2ad0b3ee14c2a501 653 Pfam PF13356 Arm DNA-binding domain 3 87 1.6E-16 T 11-10-2018 IPR025166 Integrase, DNA-binding domain XFUD_07360 17e054d48b98b59d2ad0b3ee14c2a501 653 Gene3D G3DSA:3.30.160.390 1 99 1.1E-29 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily XFUD_07360 17e054d48b98b59d2ad0b3ee14c2a501 653 Gene3D G3DSA:1.10.150.130 100 209 1.9E-24 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFUD_07360 17e054d48b98b59d2ad0b3ee14c2a501 653 SUPERFAMILY SSF56349 99 401 2.03E-48 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFUD_07360 17e054d48b98b59d2ad0b3ee14c2a501 653 Pfam PF00589 Phage integrase family 215 391 6.7E-16 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFUD_07360 17e054d48b98b59d2ad0b3ee14c2a501 653 Gene3D G3DSA:1.10.443.10 211 402 4.1E-12 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFUD_07360 17e054d48b98b59d2ad0b3ee14c2a501 653 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 150 5.0E-5 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XFUD_11360 62e784fc2ae8cb71aed9c1b6045eeb31 199 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 193 35.982 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 XFUD_11360 62e784fc2ae8cb71aed9c1b6045eeb31 199 Pfam PF01106 NifU-like domain 116 179 1.3E-19 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 XFUD_11360 62e784fc2ae8cb71aed9c1b6045eeb31 199 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 120 179 6.0E-28 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 XFUD_11360 62e784fc2ae8cb71aed9c1b6045eeb31 199 SUPERFAMILY SSF89360 1 89 1.1E-14 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFUD_11360 62e784fc2ae8cb71aed9c1b6045eeb31 199 Gene3D G3DSA:3.30.300.130 104 188 5.3E-21 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XFUD_11360 62e784fc2ae8cb71aed9c1b6045eeb31 199 Gene3D G3DSA:2.60.300.12 1 100 6.1E-7 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFUD_11360 62e784fc2ae8cb71aed9c1b6045eeb31 199 SUPERFAMILY SSF117916 105 186 6.54E-22 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XFUD_03465 c2b978c69e43b892bb950675c6625a7d 592 SUPERFAMILY SSF51445 24 372 3.24E-74 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFUD_03465 c2b978c69e43b892bb950675c6625a7d 592 Gene3D G3DSA:2.60.40.290 506 592 1.9E-16 T 11-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 XFUD_03465 c2b978c69e43b892bb950675c6625a7d 592 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 174 183 - T 11-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 XFUD_03465 c2b978c69e43b892bb950675c6625a7d 592 Pfam PF00553 Cellulose binding domain 515 591 1.5E-14 T 11-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 XFUD_03465 c2b978c69e43b892bb950675c6625a7d 592 SUPERFAMILY SSF49384 508 591 1.19E-19 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 XFUD_03465 c2b978c69e43b892bb950675c6625a7d 592 Gene3D G3DSA:3.20.20.80 22 370 3.6E-115 T 11-10-2018 XFUD_03465 c2b978c69e43b892bb950675c6625a7d 592 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 36 343 3.3E-53 T 11-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 XFUD_03465 c2b978c69e43b892bb950675c6625a7d 592 SMART SM00637 512 591 3.6E-16 T 11-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 XFUD_10650 8d48361feeafb5b317431ab2ebaf00a5 382 Gene3D G3DSA:3.40.640.10 40 279 7.7E-126 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFUD_10650 8d48361feeafb5b317431ab2ebaf00a5 382 Gene3D G3DSA:3.90.1150.10 16 379 7.7E-126 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFUD_10650 8d48361feeafb5b317431ab2ebaf00a5 382 SUPERFAMILY SSF53383 2 380 3.86E-95 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFUD_10650 8d48361feeafb5b317431ab2ebaf00a5 382 Pfam PF00155 Aminotransferase class I and II 28 379 2.1E-54 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XFUD_04235 2f49e94f9e083d56d2ecb31577b663fa 87 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 67 2.0E-24 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XFUD_04235 2f49e94f9e083d56d2ecb31577b663fa 87 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 4 71 4.7E-26 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XFUD_04235 2f49e94f9e083d56d2ecb31577b663fa 87 Pfam PF01809 Haemolytic domain 4 67 6.9E-27 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XFUD_04235 2f49e94f9e083d56d2ecb31577b663fa 87 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 68 23.12 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XFUD_04235 2f49e94f9e083d56d2ecb31577b663fa 87 SMART SM01234 2 67 2.0E-33 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor XFUD_08175 72430e0f42458e143784a8df9930d74e 168 PIRSF PIRSF000303 1 162 2.2E-63 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFUD_08175 72430e0f42458e143784a8df9930d74e 168 Pfam PF00255 Glutathione peroxidase 4 111 9.1E-39 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFUD_08175 72430e0f42458e143784a8df9930d74e 168 PRINTS PR01011 Glutathione peroxidase family signature 57 73 9.0E-19 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFUD_08175 72430e0f42458e143784a8df9930d74e 168 PRINTS PR01011 Glutathione peroxidase family signature 22 39 9.0E-19 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFUD_08175 72430e0f42458e143784a8df9930d74e 168 PRINTS PR01011 Glutathione peroxidase family signature 123 132 9.0E-19 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFUD_08175 72430e0f42458e143784a8df9930d74e 168 SUPERFAMILY SSF52833 3 159 1.36E-59 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_08175 72430e0f42458e143784a8df9930d74e 168 Gene3D G3DSA:3.40.30.10 1 162 5.1E-63 T 11-10-2018 XFUD_08175 72430e0f42458e143784a8df9930d74e 168 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 XFUD_01590 06152c2e9ac27398873c66b325d99125 402 Pfam PF00067 Cytochrome P450 82 368 6.0E-31 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 XFUD_01590 06152c2e9ac27398873c66b325d99125 402 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 341 350 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 XFUD_01590 06152c2e9ac27398873c66b325d99125 402 Gene3D G3DSA:1.10.630.10 1 402 2.2E-116 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 XFUD_01590 06152c2e9ac27398873c66b325d99125 402 SUPERFAMILY SSF48264 9 399 3.14E-90 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 XFUD_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 290 317 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 273 284 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 348 359 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 85 96 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 131 147 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 318 333 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 339 348 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_01590 06152c2e9ac27398873c66b325d99125 402 PRINTS PR00359 B-class P450 signature 192 214 1.2E-42 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:3.30.70.1320 134 326 1.1E-267 T 11-10-2018 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:1.20.1640.10 505 1011 1.1E-267 T 11-10-2018 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:3.30.70.1430 40 804 1.1E-267 T 11-10-2018 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:3.30.70.1430 559 656 1.1E-267 T 11-10-2018 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:1.20.1640.10 10 504 1.1E-267 T 11-10-2018 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 SUPERFAMILY SSF82693 135 324 2.62E-21 T 11-10-2018 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 SUPERFAMILY SSF82714 182 265 1.57E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:3.30.2090.10 708 796 1.1E-267 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.8E-56 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 SUPERFAMILY SSF82866 795 1014 1.44E-40 T 11-10-2018 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:3.30.70.1440 657 853 1.1E-267 T 11-10-2018 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 SUPERFAMILY SSF82714 712 791 2.22E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 SUPERFAMILY SSF82693 40 134 4.19E-22 T 11-10-2018 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 SUPERFAMILY SSF82866 290 489 3.01E-44 T 11-10-2018 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 Pfam PF00873 AcrB/AcrD/AcrF family 6 1014 1.7E-279 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 XFUD_10340 5989a222902f7cb63a6967da40a26951 1034 Gene3D G3DSA:3.30.2090.10 178 269 1.1E-267 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains XFUD_00445 a4bc439ad7ae2e8082e1a4183d884adf 86 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_00445 a4bc439ad7ae2e8082e1a4183d884adf 86 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.937 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_00445 a4bc439ad7ae2e8082e1a4183d884adf 86 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 1.9E-33 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_00445 a4bc439ad7ae2e8082e1a4183d884adf 86 Gene3D G3DSA:3.30.1320.10 1 86 6.6E-31 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_00445 a4bc439ad7ae2e8082e1a4183d884adf 86 Pfam PF00886 Ribosomal protein S16 8 68 3.0E-24 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_00445 a4bc439ad7ae2e8082e1a4183d884adf 86 SUPERFAMILY SSF54565 1 79 7.85E-30 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11525 935b7ce79c60d986c1680a35687e4f51 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 6.7E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_11525 935b7ce79c60d986c1680a35687e4f51 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 3.2E-152 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 XFUD_11525 935b7ce79c60d986c1680a35687e4f51 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.1E-37 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 XFUD_11525 935b7ce79c60d986c1680a35687e4f51 363 PIRSF PIRSF006641 1 363 3.2E-150 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 XFUD_11525 935b7ce79c60d986c1680a35687e4f51 363 Gene3D G3DSA:3.10.20.30 48 360 2.2E-146 T 11-10-2018 IPR012675 Beta-grasp domain superfamily XFUD_11525 935b7ce79c60d986c1680a35687e4f51 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_11525 935b7ce79c60d986c1680a35687e4f51 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_11525 935b7ce79c60d986c1680a35687e4f51 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_11525 935b7ce79c60d986c1680a35687e4f51 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_11525 935b7ce79c60d986c1680a35687e4f51 363 Gene3D G3DSA:1.10.150.300 113 200 2.2E-146 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 XFUD_11525 935b7ce79c60d986c1680a35687e4f51 363 SUPERFAMILY SSF52540 3 301 5.64E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11525 935b7ce79c60d986c1680a35687e4f51 363 SUPERFAMILY SSF81271 279 360 7.19E-35 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XFUD_11525 935b7ce79c60d986c1680a35687e4f51 363 Gene3D G3DSA:3.40.50.300 4 278 2.2E-146 T 11-10-2018 XFUD_11525 935b7ce79c60d986c1680a35687e4f51 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 43.486 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 XFUD_09720 1a326991a6e9175a9202dd3300d823ea 396 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 40 267 6.1E-77 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 XFUD_09720 1a326991a6e9175a9202dd3300d823ea 396 SUPERFAMILY SSF69189 288 380 6.67E-25 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFUD_09720 1a326991a6e9175a9202dd3300d823ea 396 Gene3D G3DSA:2.60.410.10 288 378 7.8E-30 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFUD_09720 1a326991a6e9175a9202dd3300d823ea 396 Gene3D G3DSA:3.40.710.10 27 286 2.2E-84 T 11-10-2018 XFUD_09720 1a326991a6e9175a9202dd3300d823ea 396 SUPERFAMILY SSF56601 5 288 5.52E-79 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFUD_09720 1a326991a6e9175a9202dd3300d823ea 396 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 288 378 1.4E-24 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFUD_09720 1a326991a6e9175a9202dd3300d823ea 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 128 145 6.1E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XFUD_09720 1a326991a6e9175a9202dd3300d823ea 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 6.1E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XFUD_09720 1a326991a6e9175a9202dd3300d823ea 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 155 168 6.1E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 XFUD_09720 1a326991a6e9175a9202dd3300d823ea 396 SMART SM00936 288 378 1.7E-31 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFUD_11205 9220895543315e4c1e3d6ac72118720f 267 Pfam PF01061 ABC-2 type transporter 23 228 1.2E-23 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 XFUD_08320 fdb6d6084bb91917610fa5956e407eef 92 SUPERFAMILY SSF48295 4 88 1.1E-19 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XFUD_08320 fdb6d6084bb91917610fa5956e407eef 92 Pfam PF01371 Trp repressor protein 5 89 3.7E-27 T 11-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 XFUD_08320 fdb6d6084bb91917610fa5956e407eef 92 TIGRFAM TIGR01321 TrpR: trp operon repressor 2 90 2.2E-39 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XFUD_08320 fdb6d6084bb91917610fa5956e407eef 92 Gene3D G3DSA:1.10.1270.10 1 91 1.6E-23 T 11-10-2018 IPR038116 TrpR-like superfamily XFUD_08320 fdb6d6084bb91917610fa5956e407eef 92 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 7 86 2.0E-6 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XFUD_08320 fdb6d6084bb91917610fa5956e407eef 92 PIRSF PIRSF003196 1 92 1.4E-30 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XFUD_08320 fdb6d6084bb91917610fa5956e407eef 92 Hamap MF_00475 Trp operon repressor [trpR]. 3 92 15.924 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 XFUD_05930 9ae9fb50c5ca48f07082c4acf626147a 176 Gene3D G3DSA:2.60.450.10 23 158 3.3E-30 T 11-10-2018 XFUD_05930 9ae9fb50c5ca48f07082c4acf626147a 176 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 23 161 2.8E-34 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 XFUD_05930 9ae9fb50c5ca48f07082c4acf626147a 176 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 3 161 21.773 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 XFUD_05930 9ae9fb50c5ca48f07082c4acf626147a 176 Pfam PF03968 OstA-like protein 34 143 1.9E-21 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal XFUD_03880 e5e3a64ab996eb527c410a2f74d77dca 497 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 196 216 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 XFUD_03880 e5e3a64ab996eb527c410a2f74d77dca 497 Pfam PF04055 Radical SAM superfamily 196 380 5.0E-26 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XFUD_03880 e5e3a64ab996eb527c410a2f74d77dca 497 SUPERFAMILY SSF102114 167 425 1.31E-58 T 11-10-2018 XFUD_03880 e5e3a64ab996eb527c410a2f74d77dca 497 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 49 494 2.8E-177 T 11-10-2018 XFUD_03880 e5e3a64ab996eb527c410a2f74d77dca 497 Gene3D G3DSA:3.40.50.12160 49 183 1.4E-32 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily XFUD_03880 e5e3a64ab996eb527c410a2f74d77dca 497 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 49 492 7.5E-144 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 XFUD_03880 e5e3a64ab996eb527c410a2f74d77dca 497 SMART SM00729 192 418 5.4E-54 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XFUD_03880 e5e3a64ab996eb527c410a2f74d77dca 497 Pfam PF00919 Uncharacterized protein family UPF0004 49 149 2.6E-28 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 XFUD_03880 e5e3a64ab996eb527c410a2f74d77dca 497 Gene3D G3DSA:3.80.30.20 190 436 6.4E-79 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe XFUD_03880 e5e3a64ab996eb527c410a2f74d77dca 497 Pfam PF01938 TRAM domain 433 494 1.2E-18 T 11-10-2018 IPR002792 TRAM domain XFUD_03880 e5e3a64ab996eb527c410a2f74d77dca 497 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 48 495 71.054 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 XFUD_10585 424d2a7f65cc75fbf6a70535315b22bf 295 Pfam PF00795 Carbon-nitrogen hydrolase 8 272 1.8E-54 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 XFUD_10585 424d2a7f65cc75fbf6a70535315b22bf 295 SUPERFAMILY SSF56317 6 292 3.66E-85 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XFUD_10585 424d2a7f65cc75fbf6a70535315b22bf 295 Gene3D G3DSA:3.60.110.10 3 293 2.1E-95 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XFUD_01835 d4c856f1cd5599ee87de8eda6bd460c2 141 SUPERFAMILY SSF102220 106 134 8.76E-5 T 11-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_00920 cd967606d8426421e32438dde0862ae2 400 Gene3D G3DSA:3.40.350.10 1 165 1.3E-44 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XFUD_00920 cd967606d8426421e32438dde0862ae2 400 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 166 2.2E-15 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 XFUD_00920 cd967606d8426421e32438dde0862ae2 400 SUPERFAMILY SSF53092 18 165 3.84E-21 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal XFUD_00920 cd967606d8426421e32438dde0862ae2 400 Pfam PF00557 Metallopeptidase family M24 175 382 2.5E-47 T 11-10-2018 IPR000994 Peptidase M24 XFUD_00920 cd967606d8426421e32438dde0862ae2 400 SUPERFAMILY SSF55920 166 392 5.23E-65 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like XFUD_00920 cd967606d8426421e32438dde0862ae2 400 Gene3D G3DSA:3.90.230.10 166 399 2.7E-71 T 11-10-2018 XFUD_04215 116b245ac748c81f9bc27705fa448bb6 603 Pfam PF01019 Gamma-glutamyltranspeptidase 54 570 1.7E-169 T 11-10-2018 XFUD_04215 116b245ac748c81f9bc27705fa448bb6 603 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 40 569 1.1E-137 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 XFUD_04215 116b245ac748c81f9bc27705fa448bb6 603 SUPERFAMILY SSF56235 37 570 6.56E-168 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFUD_04215 116b245ac748c81f9bc27705fa448bb6 603 Gene3D G3DSA:1.10.246.130 267 376 1.8E-34 T 11-10-2018 XFUD_04215 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 402 420 1.6E-65 T 11-10-2018 XFUD_04215 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 135 153 1.6E-65 T 11-10-2018 XFUD_04215 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 281 300 1.6E-65 T 11-10-2018 XFUD_04215 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 443 458 1.6E-65 T 11-10-2018 XFUD_04215 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 251 267 1.6E-65 T 11-10-2018 XFUD_04215 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 61 86 1.6E-65 T 11-10-2018 XFUD_04215 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 378 396 1.6E-65 T 11-10-2018 XFUD_04215 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 466 483 1.6E-65 T 11-10-2018 XFUD_04215 116b245ac748c81f9bc27705fa448bb6 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 153 172 1.6E-65 T 11-10-2018 XFUD_04215 116b245ac748c81f9bc27705fa448bb6 603 Gene3D G3DSA:3.60.20.40 378 571 3.1E-56 T 11-10-2018 XFUD_04670 872470bd96123b19cd3309fbdbcf3403 237 SUPERFAMILY SSF55347 121 208 1.77E-20 T 11-10-2018 XFUD_04670 872470bd96123b19cd3309fbdbcf3403 237 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 168 2.4E-36 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFUD_04670 872470bd96123b19cd3309fbdbcf3403 237 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 122 235 1.1E-27 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFUD_04670 872470bd96123b19cd3309fbdbcf3403 237 Gene3D G3DSA:3.40.50.720 6 234 5.2E-58 T 11-10-2018 XFUD_04670 872470bd96123b19cd3309fbdbcf3403 237 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 237 27.636 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFUD_04670 872470bd96123b19cd3309fbdbcf3403 237 SUPERFAMILY SSF51735 4 236 1.18E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_04670 872470bd96123b19cd3309fbdbcf3403 237 Gene3D G3DSA:3.30.360.10 121 206 5.2E-58 T 11-10-2018 XFUD_04670 872470bd96123b19cd3309fbdbcf3403 237 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 119 1.1E-22 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFUD_04670 872470bd96123b19cd3309fbdbcf3403 237 PIRSF PIRSF000161 3 237 7.6E-62 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFUD_04670 872470bd96123b19cd3309fbdbcf3403 237 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 143 160 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFUD_09430 2827a8c71f3b713ebacbb30b417c9513 222 SUPERFAMILY SSF52374 4 217 6.19E-44 T 11-10-2018 XFUD_09430 2827a8c71f3b713ebacbb30b417c9513 222 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 217 25.341 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XFUD_09430 2827a8c71f3b713ebacbb30b417c9513 222 Pfam PF01467 Cytidylyltransferase-like 7 191 7.3E-36 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XFUD_09430 2827a8c71f3b713ebacbb30b417c9513 222 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 63 2.2E-9 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XFUD_09430 2827a8c71f3b713ebacbb30b417c9513 222 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 216 2.0E-57 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 XFUD_09430 2827a8c71f3b713ebacbb30b417c9513 222 Gene3D G3DSA:3.40.50.620 5 221 1.5E-52 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_00515 fde048a9b8c9e0004e3f6f3d5db551b2 71 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 1.1E-26 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XFUD_00515 fde048a9b8c9e0004e3f6f3d5db551b2 71 Gene3D G3DSA:3.30.70.1680 1 58 5.1E-28 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 XFUD_00515 fde048a9b8c9e0004e3f6f3d5db551b2 71 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 7.0E-21 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XFUD_00515 fde048a9b8c9e0004e3f6f3d5db551b2 71 SUPERFAMILY SSF117130 1 53 3.01E-20 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 XFUD_00515 fde048a9b8c9e0004e3f6f3d5db551b2 71 Pfam PF02599 Global regulator protein family 1 52 2.7E-26 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XFUD_00515 fde048a9b8c9e0004e3f6f3d5db551b2 71 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 71 16.759 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 XFUD_05040 f8c107eae354b5c508d916e207caab04 208 SUPERFAMILY SSF52096 17 200 5.39E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFUD_05040 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 4.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFUD_05040 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 4.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFUD_05040 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 4.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFUD_05040 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 4.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFUD_05040 f8c107eae354b5c508d916e207caab04 208 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 4.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFUD_05040 f8c107eae354b5c508d916e207caab04 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 11-10-2018 IPR018215 ClpP, Ser active site XFUD_05040 f8c107eae354b5c508d916e207caab04 208 Gene3D G3DSA:3.90.226.10 2 202 1.9E-82 T 11-10-2018 XFUD_05040 f8c107eae354b5c508d916e207caab04 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 11-10-2018 IPR033135 ClpP, histidine active site XFUD_05040 f8c107eae354b5c508d916e207caab04 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 43.433 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFUD_05040 f8c107eae354b5c508d916e207caab04 208 Pfam PF00574 Clp protease 19 199 2.9E-86 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA XFUD_05040 f8c107eae354b5c508d916e207caab04 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 197 1.2E-104 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFUD_02690 730dc441947116ae5099db9e384ebf8e 232 Gene3D G3DSA:3.10.50.40 93 232 8.3E-21 T 11-10-2018 XFUD_02690 730dc441947116ae5099db9e384ebf8e 232 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 182 229 1.1E-6 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XFUD_02690 730dc441947116ae5099db9e384ebf8e 232 SUPERFAMILY SSF54534 27 232 2.95E-37 T 11-10-2018 XFUD_02690 730dc441947116ae5099db9e384ebf8e 232 Gene3D G3DSA:1.10.287.460 23 88 1.0E-17 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 XFUD_02690 730dc441947116ae5099db9e384ebf8e 232 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 17 135 1.4E-25 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 XFUD_04410 7a504d56ef1a5446cfbc3de344c69754 435 Gene3D G3DSA:3.30.300.30 333 433 4.9E-12 T 11-10-2018 XFUD_04410 7a504d56ef1a5446cfbc3de344c69754 435 Gene3D G3DSA:3.40.50.12780 7 300 1.1E-22 T 11-10-2018 XFUD_04410 7a504d56ef1a5446cfbc3de344c69754 435 SUPERFAMILY SSF56801 8 433 3.53E-47 T 11-10-2018 XFUD_04410 7a504d56ef1a5446cfbc3de344c69754 435 Pfam PF00501 AMP-binding enzyme 113 278 5.7E-16 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XFUD_08625 e27d1a531952d9898f3261c0e8eb351a 183 SUPERFAMILY SSF52833 50 178 2.53E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_08625 e27d1a531952d9898f3261c0e8eb351a 183 ProSitePatterns PS00194 Thioredoxin family active site. 73 91 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XFUD_08625 e27d1a531952d9898f3261c0e8eb351a 183 Gene3D G3DSA:3.40.30.10 20 177 7.5E-31 T 11-10-2018 XFUD_08625 e27d1a531952d9898f3261c0e8eb351a 183 Pfam PF00578 AhpC/TSA family 50 161 7.7E-14 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 XFUD_04070 541fff7d09d3477e37629dae00f6486c 364 Pfam PF01872 RibD C-terminal domain 152 356 9.8E-46 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 XFUD_04070 541fff7d09d3477e37629dae00f6486c 364 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 357 1.5E-112 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 XFUD_04070 541fff7d09d3477e37629dae00f6486c 364 PIRSF PIRSF006769 4 361 9.3E-122 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 XFUD_04070 541fff7d09d3477e37629dae00f6486c 364 SUPERFAMILY SSF53597 150 360 1.13E-55 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XFUD_04070 541fff7d09d3477e37629dae00f6486c 364 Gene3D G3DSA:3.40.430.10 146 362 1.4E-64 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XFUD_04070 541fff7d09d3477e37629dae00f6486c 364 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 XFUD_04070 541fff7d09d3477e37629dae00f6486c 364 Gene3D G3DSA:3.40.140.10 3 145 1.5E-44 T 11-10-2018 XFUD_04070 541fff7d09d3477e37629dae00f6486c 364 SUPERFAMILY SSF53927 8 149 1.52E-46 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XFUD_04070 541fff7d09d3477e37629dae00f6486c 364 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 360 6.8E-53 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 XFUD_04070 541fff7d09d3477e37629dae00f6486c 364 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 104 2.3E-19 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 687 695 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 Gene3D G3DSA:3.30.230.10 596 783 1.1E-77 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 SUPERFAMILY SSF52540 317 597 2.36E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 201 2.7E-36 T 11-10-2018 IPR003111 Lon, substrate-binding domain XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 Gene3D G3DSA:1.10.8.60 492 595 2.3E-30 T 11-10-2018 XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 581 783 3.1E-92 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 Gene3D G3DSA:2.30.130.40 1 115 1.8E-31 T 11-10-2018 XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 PIRSF PIRSF001174 1 785 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 353 489 1.2E-17 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 SMART SM00382 349 495 1.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 SMART SM00464 10 203 3.7E-66 T 11-10-2018 IPR003111 Lon, substrate-binding domain XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 TIGRFAM TIGR00763 lon: endopeptidase La 13 782 1.1E-300 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 SUPERFAMILY SSF88697 10 202 5.96E-44 T 11-10-2018 IPR015947 PUA-like superfamily XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 Hamap MF_01973 Lon protease [lon]. 11 783 70.208 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 Gene3D G3DSA:1.20.58.1480 122 246 3.3E-42 T 11-10-2018 XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 SUPERFAMILY SSF54211 606 781 2.16E-56 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 Gene3D G3DSA:3.40.50.300 314 491 4.5E-62 T 11-10-2018 XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 714 733 5.7E-53 T 11-10-2018 XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 357 376 5.7E-53 T 11-10-2018 XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 737 755 5.7E-53 T 11-10-2018 XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 606 622 5.7E-53 T 11-10-2018 XFUD_05050 ea185b99c7fd4dc4a6d2e37fdc4efdd6 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 684 703 5.7E-53 T 11-10-2018 XFUD_09930 cbaeba04f2ae14ab80b4975ef59f4b04 426 PIRSF PIRSF001529 1 426 3.9E-164 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFUD_09930 cbaeba04f2ae14ab80b4975ef59f4b04 426 SUPERFAMILY SSF55681 117 420 5.69E-97 T 11-10-2018 XFUD_09930 cbaeba04f2ae14ab80b4975ef59f4b04 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 38.396 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFUD_09930 cbaeba04f2ae14ab80b4975ef59f4b04 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 225 402 3.3E-33 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_09930 cbaeba04f2ae14ab80b4975ef59f4b04 426 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 3.7E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFUD_09930 cbaeba04f2ae14ab80b4975ef59f4b04 426 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 3.7E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFUD_09930 cbaeba04f2ae14ab80b4975ef59f4b04 426 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 3.7E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFUD_09930 cbaeba04f2ae14ab80b4975ef59f4b04 426 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 3.7E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFUD_09930 cbaeba04f2ae14ab80b4975ef59f4b04 426 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 3.7E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFUD_09930 cbaeba04f2ae14ab80b4975ef59f4b04 426 Gene3D G3DSA:1.10.287.40 1 105 6.6E-15 T 11-10-2018 XFUD_09930 cbaeba04f2ae14ab80b4975ef59f4b04 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 5.9E-28 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 XFUD_09930 cbaeba04f2ae14ab80b4975ef59f4b04 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 1.9E-159 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 XFUD_09930 cbaeba04f2ae14ab80b4975ef59f4b04 426 Gene3D G3DSA:3.30.930.10 106 425 1.1E-114 T 11-10-2018 XFUD_09930 cbaeba04f2ae14ab80b4975ef59f4b04 426 SUPERFAMILY SSF46589 1 113 1.26E-23 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 XFUD_11445 d83f873113b525682848c58f216ded07 705 Pfam PF00679 Elongation factor G C-terminus 614 700 1.8E-28 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like XFUD_11445 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11445 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11445 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11445 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11445 d83f873113b525682848c58f216ded07 705 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.7E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11445 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF54211 487 613 2.38E-39 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_11445 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF54980 409 486 5.76E-26 T 11-10-2018 IPR035647 EF-G domain III/V-like XFUD_11445 d83f873113b525682848c58f216ded07 705 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 704 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFUD_11445 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:3.30.70.870 410 485 2.4E-34 T 11-10-2018 XFUD_11445 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:3.40.50.300 1 298 3.8E-114 T 11-10-2018 XFUD_11445 d83f873113b525682848c58f216ded07 705 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site XFUD_11445 d83f873113b525682848c58f216ded07 705 SMART SM00838 614 701 7.5E-54 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like XFUD_11445 d83f873113b525682848c58f216ded07 705 Pfam PF03764 Elongation factor G, domain IV 484 612 4.2E-43 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 XFUD_11445 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF54980 617 704 2.45E-28 T 11-10-2018 IPR035647 EF-G domain III/V-like XFUD_11445 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:3.30.70.240 618 688 6.0E-83 T 11-10-2018 XFUD_11445 d83f873113b525682848c58f216ded07 705 Pfam PF03144 Elongation factor Tu domain 2 329 396 2.0E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XFUD_11445 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF52540 6 288 3.56E-105 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11445 d83f873113b525682848c58f216ded07 705 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 5.7E-32 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFUD_11445 d83f873113b525682848c58f216ded07 705 SMART SM00889 485 612 1.1E-68 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 XFUD_11445 d83f873113b525682848c58f216ded07 705 Pfam PF14492 Elongation Factor G, domain II 409 483 3.2E-35 T 11-10-2018 XFUD_11445 d83f873113b525682848c58f216ded07 705 SUPERFAMILY SSF50447 255 407 7.73E-35 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFUD_11445 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:2.40.30.10 299 405 1.3E-44 T 11-10-2018 XFUD_11445 d83f873113b525682848c58f216ded07 705 Gene3D G3DSA:3.30.230.10 489 700 6.0E-83 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFUD_11445 d83f873113b525682848c58f216ded07 705 Hamap MF_00054_B Elongation factor G [fusA]. 6 705 109.297 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFUD_11445 d83f873113b525682848c58f216ded07 705 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 7.5E-65 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_10560 67cd9000452b2cc2b03a39d5260fcde9 104 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 XFUD_10560 67cd9000452b2cc2b03a39d5260fcde9 104 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 7.8E-42 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 XFUD_10560 67cd9000452b2cc2b03a39d5260fcde9 104 Pfam PF00216 Bacterial DNA-binding protein 1 90 5.4E-28 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_10560 67cd9000452b2cc2b03a39d5260fcde9 104 SUPERFAMILY SSF47729 1 91 3.39E-29 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFUD_10560 67cd9000452b2cc2b03a39d5260fcde9 104 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.501 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 XFUD_10560 67cd9000452b2cc2b03a39d5260fcde9 104 Gene3D G3DSA:4.10.520.10 1 92 1.9E-31 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFUD_10560 67cd9000452b2cc2b03a39d5260fcde9 104 SMART SM00411 1 91 3.1E-39 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_10560 67cd9000452b2cc2b03a39d5260fcde9 104 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.0E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_10560 67cd9000452b2cc2b03a39d5260fcde9 104 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.0E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_10560 67cd9000452b2cc2b03a39d5260fcde9 104 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.0E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_07465 bd55b64a7cc55d9a88c435bcdb42b292 255 Gene3D G3DSA:3.40.50.720 8 253 9.9E-38 T 11-10-2018 XFUD_07465 bd55b64a7cc55d9a88c435bcdb42b292 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07465 bd55b64a7cc55d9a88c435bcdb42b292 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07465 bd55b64a7cc55d9a88c435bcdb42b292 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07465 bd55b64a7cc55d9a88c435bcdb42b292 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07465 bd55b64a7cc55d9a88c435bcdb42b292 255 Pfam PF00106 short chain dehydrogenase 14 186 4.5E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07465 bd55b64a7cc55d9a88c435bcdb42b292 255 SUPERFAMILY SSF51735 13 219 2.09E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_12465 88b0e5ac1356f8c4d98c9faeaef8e5fd 254 PIRSF PIRSF009320 1 61 1.6E-16 T 11-10-2018 XFUD_12465 88b0e5ac1356f8c4d98c9faeaef8e5fd 254 PIRSF PIRSF009320 84 253 6.6E-8 T 11-10-2018 XFUD_12465 88b0e5ac1356f8c4d98c9faeaef8e5fd 254 Pfam PF13614 AAA domain 1 173 7.7E-33 T 11-10-2018 IPR025669 AAA domain XFUD_12465 88b0e5ac1356f8c4d98c9faeaef8e5fd 254 Gene3D G3DSA:3.40.50.300 1 254 2.9E-52 T 11-10-2018 XFUD_12465 88b0e5ac1356f8c4d98c9faeaef8e5fd 254 SUPERFAMILY SSF52540 1 252 1.87E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_02425 3e2c2b15c86e270989f10fe514c9afbb 217 Pfam PF02223 Thymidylate kinase 14 188 1.5E-35 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 XFUD_02425 3e2c2b15c86e270989f10fe514c9afbb 217 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 9 188 9.7E-37 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 XFUD_02425 3e2c2b15c86e270989f10fe514c9afbb 217 Hamap MF_00165 Thymidylate kinase [tmk]. 10 200 20.782 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 XFUD_02425 3e2c2b15c86e270989f10fe514c9afbb 217 SUPERFAMILY SSF52540 9 200 9.23E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_02425 3e2c2b15c86e270989f10fe514c9afbb 217 Gene3D G3DSA:3.40.50.300 8 202 1.8E-44 T 11-10-2018 XFUD_06305 c7bbdad2aa32ab75ea92129ace7a1490 148 Pfam PF02643 Uncharacterized ACR, COG1430 34 140 1.3E-32 T 11-10-2018 IPR003795 Protein of unknown function DUF192 XFUD_06305 c7bbdad2aa32ab75ea92129ace7a1490 148 Gene3D G3DSA:2.60.120.1140 18 142 9.4E-40 T 11-10-2018 IPR038695 Saro_0823-like superfamily XFUD_04835 367d20165a29fe82b6aac6c79cc30886 466 Gene3D G3DSA:1.10.1140.10 349 466 1.2E-59 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFUD_04835 367d20165a29fe82b6aac6c79cc30886 466 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 9.1E-250 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 XFUD_04835 367d20165a29fe82b6aac6c79cc30886 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFUD_04835 367d20165a29fe82b6aac6c79cc30886 466 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 4.6E-18 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFUD_04835 367d20165a29fe82b6aac6c79cc30886 466 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.353 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 XFUD_04835 367d20165a29fe82b6aac6c79cc30886 466 SUPERFAMILY SSF47917 349 464 1.18E-54 T 11-10-2018 XFUD_04835 367d20165a29fe82b6aac6c79cc30886 466 Gene3D G3DSA:3.40.50.300 74 348 4.2E-110 T 11-10-2018 XFUD_04835 367d20165a29fe82b6aac6c79cc30886 466 SUPERFAMILY SSF52540 75 352 1.81E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_04835 367d20165a29fe82b6aac6c79cc30886 466 SMART SM00382 140 409 9.1E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_04835 367d20165a29fe82b6aac6c79cc30886 466 SUPERFAMILY SSF50615 1 72 2.04E-24 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFUD_04835 367d20165a29fe82b6aac6c79cc30886 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.3E-61 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFUD_04835 367d20165a29fe82b6aac6c79cc30886 466 Gene3D G3DSA:2.40.10.170 1 73 3.1E-28 T 11-10-2018 XFUD_04275 8773e8e79a8326282419a18fb780ed4c 401 SUPERFAMILY SSF52402 3 185 7.72E-34 T 11-10-2018 XFUD_04275 8773e8e79a8326282419a18fb780ed4c 401 Pfam PF00764 Arginosuccinate synthase 7 392 1.2E-84 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFUD_04275 8773e8e79a8326282419a18fb780ed4c 401 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFUD_04275 8773e8e79a8326282419a18fb780ed4c 401 SUPERFAMILY SSF69864 174 398 1.15E-58 T 11-10-2018 XFUD_04275 8773e8e79a8326282419a18fb780ed4c 401 Gene3D G3DSA:3.90.1260.10 65 352 4.5E-103 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFUD_04275 8773e8e79a8326282419a18fb780ed4c 401 Gene3D G3DSA:3.40.50.620 6 174 4.5E-103 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_04275 8773e8e79a8326282419a18fb780ed4c 401 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 397 38.335 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFUD_04275 8773e8e79a8326282419a18fb780ed4c 401 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFUD_04275 8773e8e79a8326282419a18fb780ed4c 401 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 395 2.7E-83 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 XFUD_07040 2a54277ace5011eed64e4904d8f400cc 203 Pfam PF02661 Fic/DOC family 55 152 1.8E-18 T 11-10-2018 IPR003812 Fido domain XFUD_07040 2a54277ace5011eed64e4904d8f400cc 203 SUPERFAMILY SSF140931 37 197 2.49E-36 T 11-10-2018 IPR036597 Fido-like domain superfamily XFUD_07040 2a54277ace5011eed64e4904d8f400cc 203 Gene3D G3DSA:1.10.3290.10 2 202 1.3E-65 T 11-10-2018 IPR036597 Fido-like domain superfamily XFUD_05225 6dd34274efa71b7e5a6d68dd2d73943f 298 ProSitePatterns PS00161 Isocitrate lyase signature. 125 130 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 XFUD_05225 6dd34274efa71b7e5a6d68dd2d73943f 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 16 255 1.1E-50 T 11-10-2018 XFUD_05225 6dd34274efa71b7e5a6d68dd2d73943f 298 SUPERFAMILY SSF51621 7 292 4.04E-97 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XFUD_05225 6dd34274efa71b7e5a6d68dd2d73943f 298 Gene3D G3DSA:3.20.20.60 5 298 2.1E-100 T 11-10-2018 XFUD_05225 6dd34274efa71b7e5a6d68dd2d73943f 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 8 296 48.368 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 XFUD_05225 6dd34274efa71b7e5a6d68dd2d73943f 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 11 294 1.8E-124 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 XFUD_01165 a9b9a226910be94b57c728fea22098f0 187 SUPERFAMILY SSF52540 1 183 5.82E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01165 a9b9a226910be94b57c728fea22098f0 187 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XFUD_01165 a9b9a226910be94b57c728fea22098f0 187 TIGRFAM TIGR01351 adk: adenylate kinase 2 128 3.1E-50 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 XFUD_01165 a9b9a226910be94b57c728fea22098f0 187 Gene3D G3DSA:3.40.50.300 1 185 9.7E-62 T 11-10-2018 XFUD_01165 a9b9a226910be94b57c728fea22098f0 187 PRINTS PR00094 Adenylate kinase signature 32 46 1.6E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XFUD_01165 a9b9a226910be94b57c728fea22098f0 187 PRINTS PR00094 Adenylate kinase signature 81 97 1.6E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XFUD_01165 a9b9a226910be94b57c728fea22098f0 187 PRINTS PR00094 Adenylate kinase signature 4 17 1.6E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XFUD_01165 a9b9a226910be94b57c728fea22098f0 187 PRINTS PR00094 Adenylate kinase signature 133 148 1.6E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XFUD_01165 a9b9a226910be94b57c728fea22098f0 187 PRINTS PR00094 Adenylate kinase signature 150 164 1.6E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XFUD_01165 a9b9a226910be94b57c728fea22098f0 187 Hamap MF_00235 Adenylate kinase [adk]. 1 186 44.606 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 XFUD_01165 a9b9a226910be94b57c728fea22098f0 187 Pfam PF00406 Adenylate kinase 5 163 1.4E-53 T 11-10-2018 XFUD_10145 5aa9e52d74cd6d04edcb1ef51f577f39 126 Gene3D G3DSA:1.10.3830.10 8 125 2.1E-37 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 XFUD_10145 5aa9e52d74cd6d04edcb1ef51f577f39 126 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 121 6.3E-33 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 XFUD_00910 7689c6430ad776b60a9871babe15415d 168 Gene3D G3DSA:1.10.10.10 15 162 1.2E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_00910 7689c6430ad776b60a9871babe15415d 168 SUPERFAMILY SSF46785 26 162 6.73E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_00910 7689c6430ad776b60a9871babe15415d 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 9.5E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_00910 7689c6430ad776b60a9871babe15415d 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 9.5E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_00910 7689c6430ad776b60a9871babe15415d 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 9.5E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_00910 7689c6430ad776b60a9871babe15415d 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 9.5E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_00910 7689c6430ad776b60a9871babe15415d 168 Pfam PF01047 MarR family 52 112 2.3E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_00910 7689c6430ad776b60a9871babe15415d 168 SMART SM00347 45 147 1.3E-19 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 4.7E-23 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 XFUD_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 SMART SM01232 131 223 2.6E-43 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 XFUD_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF57716 219 270 4.56E-15 T 11-10-2018 XFUD_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 Gene3D G3DSA:3.20.190.10 2 130 4.2E-36 T 11-10-2018 IPR035937 MutM-like, N-terminal XFUD_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 XFUD_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 Gene3D G3DSA:1.10.8.50 141 270 6.2E-43 T 11-10-2018 XFUD_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF81624 2 136 6.67E-38 T 11-10-2018 IPR035937 MutM-like, N-terminal XFUD_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 1.2E-87 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 XFUD_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF46946 132 223 1.31E-28 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 XFUD_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 SMART SM00898 2 117 5.1E-49 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 XFUD_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 41.633 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 XFUD_00295 fe300dc09c0c12b34ed8fbb76d58f93f 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 7.9E-31 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 XFUD_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 4.7E-23 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 XFUD_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 SMART SM01232 131 223 2.6E-43 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 XFUD_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF57716 219 270 4.56E-15 T 11-10-2018 XFUD_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 Gene3D G3DSA:3.20.190.10 2 130 4.2E-36 T 11-10-2018 IPR035937 MutM-like, N-terminal XFUD_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 XFUD_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 Gene3D G3DSA:1.10.8.50 141 270 6.2E-43 T 11-10-2018 XFUD_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF81624 2 136 6.67E-38 T 11-10-2018 IPR035937 MutM-like, N-terminal XFUD_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 1.2E-87 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 XFUD_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 SUPERFAMILY SSF46946 132 223 1.31E-28 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 XFUD_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 SMART SM00898 2 117 5.1E-49 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 XFUD_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 41.633 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 XFUD_00725 fe300dc09c0c12b34ed8fbb76d58f93f 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 7.9E-31 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 XFUD_06875 29b25cda1f0a67fdb63834b0195f79da 455 Pfam PF00144 Beta-lactamase 68 395 2.4E-64 T 11-10-2018 IPR001466 Beta-lactamase-related XFUD_06875 29b25cda1f0a67fdb63834b0195f79da 455 SUPERFAMILY SSF56601 62 402 2.47E-74 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFUD_06875 29b25cda1f0a67fdb63834b0195f79da 455 Gene3D G3DSA:3.40.710.10 57 396 3.4E-77 T 11-10-2018 XFUD_06485 f79d9fad7e6c83493d0ed1e3bf190241 229 SUPERFAMILY SSF53067 107 214 1.42E-19 T 11-10-2018 XFUD_06485 f79d9fad7e6c83493d0ed1e3bf190241 229 Gene3D G3DSA:3.30.420.40 94 185 2.5E-64 T 11-10-2018 XFUD_06485 f79d9fad7e6c83493d0ed1e3bf190241 229 SUPERFAMILY SSF53067 3 102 9.06E-28 T 11-10-2018 XFUD_06485 f79d9fad7e6c83493d0ed1e3bf190241 229 Pfam PF00814 Glycoprotease family 28 220 4.2E-29 T 11-10-2018 IPR000905 Gcp-like domain XFUD_06485 f79d9fad7e6c83493d0ed1e3bf190241 229 Gene3D G3DSA:3.30.420.40 3 216 2.5E-64 T 11-10-2018 XFUD_06485 f79d9fad7e6c83493d0ed1e3bf190241 229 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 2.0E-51 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 XFUD_03375 a71b5067f4264153121fab8a82a5a4f0 491 Gene3D G3DSA:3.40.1390.10 3 95 4.3E-19 T 11-10-2018 XFUD_03375 a71b5067f4264153121fab8a82a5a4f0 491 Pfam PF08245 Mur ligase middle domain 105 307 1.3E-47 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XFUD_03375 a71b5067f4264153121fab8a82a5a4f0 491 SUPERFAMILY SSF53244 328 482 9.81E-46 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFUD_03375 a71b5067f4264153121fab8a82a5a4f0 491 Gene3D G3DSA:3.90.190.20 336 490 4.0E-55 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFUD_03375 a71b5067f4264153121fab8a82a5a4f0 491 Pfam PF01225 Mur ligase family, catalytic domain 18 93 2.8E-10 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XFUD_03375 a71b5067f4264153121fab8a82a5a4f0 491 SUPERFAMILY SSF63418 3 96 3.92E-19 T 11-10-2018 IPR035911 MurE/MurF, N-terminal XFUD_03375 a71b5067f4264153121fab8a82a5a4f0 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 411 2.4E-18 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XFUD_03375 a71b5067f4264153121fab8a82a5a4f0 491 Gene3D G3DSA:3.40.1190.10 96 331 7.3E-81 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFUD_03375 a71b5067f4264153121fab8a82a5a4f0 491 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 481 34.087 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 XFUD_03375 a71b5067f4264153121fab8a82a5a4f0 491 SUPERFAMILY SSF53623 96 327 5.63E-77 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFUD_03375 a71b5067f4264153121fab8a82a5a4f0 491 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 16 481 1.1E-149 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 XFUD_01940 289f7773a1df53d853cf411b15c33f55 379 SUPERFAMILY SSF52821 2 105 9.3E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFUD_01940 289f7773a1df53d853cf411b15c33f55 379 Pfam PF00899 ThiF family 119 356 6.2E-66 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 XFUD_01940 289f7773a1df53d853cf411b15c33f55 379 Gene3D G3DSA:3.40.250.10 4 105 1.6E-21 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFUD_01940 289f7773a1df53d853cf411b15c33f55 379 SMART SM00450 6 102 3.4E-8 T 11-10-2018 IPR001763 Rhodanese-like domain XFUD_01940 289f7773a1df53d853cf411b15c33f55 379 Gene3D G3DSA:3.40.50.720 112 363 2.7E-89 T 11-10-2018 XFUD_01940 289f7773a1df53d853cf411b15c33f55 379 Pfam PF00581 Rhodanese-like domain 7 98 1.9E-7 T 11-10-2018 IPR001763 Rhodanese-like domain XFUD_01940 289f7773a1df53d853cf411b15c33f55 379 SUPERFAMILY SSF69572 107 361 4.32E-89 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 XFUD_11655 847a5bdad6172235114a101c996c113a 658 Gene3D G3DSA:3.40.50.300 4 265 2.1E-84 T 11-10-2018 XFUD_11655 847a5bdad6172235114a101c996c113a 658 SUPERFAMILY SSF52540 2 628 2.09E-156 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11655 847a5bdad6172235114a101c996c113a 658 Gene3D G3DSA:3.40.50.300 273 623 2.2E-104 T 11-10-2018 XFUD_11655 847a5bdad6172235114a101c996c113a 658 Gene3D G3DSA:1.10.486.10 375 530 2.2E-104 T 11-10-2018 XFUD_11655 847a5bdad6172235114a101c996c113a 658 Pfam PF13361 UvrD-like helicase C-terminal domain 269 603 2.7E-62 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XFUD_11655 847a5bdad6172235114a101c996c113a 658 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 4 657 0.0 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 XFUD_11655 847a5bdad6172235114a101c996c113a 658 Gene3D G3DSA:1.10.10.160 106 181 2.1E-84 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily XFUD_11655 847a5bdad6172235114a101c996c113a 658 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 658 35.926 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 XFUD_11655 847a5bdad6172235114a101c996c113a 658 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 263 2.1E-66 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 XFUD_11400 46526996b00e083750a21f62e20ecdeb 203 SUPERFAMILY SSF54719 88 202 3.4E-43 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_11400 46526996b00e083750a21f62e20ecdeb 203 PIRSF PIRSF000349 1 203 8.9E-78 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_11400 46526996b00e083750a21f62e20ecdeb 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 1.8E-37 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_11400 46526996b00e083750a21f62e20ecdeb 203 Gene3D G3DSA:2.40.500.20 90 203 8.6E-44 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_11400 46526996b00e083750a21f62e20ecdeb 203 Gene3D G3DSA:1.10.287.990 20 89 6.7E-30 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_11400 46526996b00e083750a21f62e20ecdeb 203 SUPERFAMILY SSF46609 1 89 1.44E-35 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_11400 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.3E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_11400 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 3.3E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_11400 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 3.3E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_11400 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.3E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_11400 46526996b00e083750a21f62e20ecdeb 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 3.3E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_11400 46526996b00e083750a21f62e20ecdeb 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 2.9E-32 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_11400 46526996b00e083750a21f62e20ecdeb 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 XFUD_05690 fd1d3ce74beac9bd0925205ccfab2510 749 SUPERFAMILY SSF56719 35 489 1.28E-145 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XFUD_05690 fd1d3ce74beac9bd0925205ccfab2510 749 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 651 700 1.1E-4 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFUD_05690 fd1d3ce74beac9bd0925205ccfab2510 749 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 603 645 0.0032 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFUD_05690 fd1d3ce74beac9bd0925205ccfab2510 749 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 474 1.5E-128 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFUD_05690 fd1d3ce74beac9bd0925205ccfab2510 749 SMART SM00434 15 467 8.3E-204 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFUD_05690 fd1d3ce74beac9bd0925205ccfab2510 749 Gene3D G3DSA:3.90.199.10 36 487 3.5E-166 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 XFUD_05690 fd1d3ce74beac9bd0925205ccfab2510 749 SUPERFAMILY SSF101904 503 745 7.19E-48 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XFUD_05690 fd1d3ce74beac9bd0925205ccfab2510 749 Gene3D G3DSA:2.120.10.90 505 736 2.0E-16 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XFUD_05690 fd1d3ce74beac9bd0925205ccfab2510 749 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 32.95 T 11-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_05690 fd1d3ce74beac9bd0925205ccfab2510 749 Gene3D G3DSA:3.30.1360.40 242 337 3.5E-166 T 11-10-2018 XFUD_05690 fd1d3ce74beac9bd0925205ccfab2510 749 Gene3D G3DSA:1.10.268.10 375 460 3.5E-166 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XFUD_05690 fd1d3ce74beac9bd0925205ccfab2510 749 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 13 745 0.0 T 11-10-2018 XFUD_06010 053855612247d486e04bcd0814d786da 411 Gene3D G3DSA:3.40.640.10 58 306 1.2E-141 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFUD_06010 053855612247d486e04bcd0814d786da 411 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 405 70.832 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 XFUD_06010 053855612247d486e04bcd0814d786da 411 Gene3D G3DSA:3.90.1150.10 23 395 1.2E-141 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFUD_06010 053855612247d486e04bcd0814d786da 411 Pfam PF00202 Aminotransferase class-III 20 402 2.4E-112 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFUD_06010 053855612247d486e04bcd0814d786da 411 PIRSF PIRSF000521 173 405 6.4E-33 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFUD_06010 053855612247d486e04bcd0814d786da 411 PIRSF PIRSF000521 21 159 5.7E-7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFUD_06010 053855612247d486e04bcd0814d786da 411 SUPERFAMILY SSF53383 12 403 2.15E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFUD_06010 053855612247d486e04bcd0814d786da 411 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 402 8.6E-140 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 XFUD_06010 053855612247d486e04bcd0814d786da 411 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 224 261 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFUD_07865 73cbea07f7914b8a586912ea8e76c0c7 64 SUPERFAMILY SSF57829 2 55 3.42E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 XFUD_07865 73cbea07f7914b8a586912ea8e76c0c7 64 Pfam PF01783 Ribosomal L32p protein family 2 55 7.6E-20 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_07865 73cbea07f7914b8a586912ea8e76c0c7 64 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.4E-19 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_07865 73cbea07f7914b8a586912ea8e76c0c7 64 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.135 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04450 38a0d094020c6bda38dd811b510681f1 396 SUPERFAMILY SSF55347 130 268 4.9E-59 T 11-10-2018 XFUD_04450 38a0d094020c6bda38dd811b510681f1 396 PIRSF PIRSF006205 5 390 5.4E-152 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XFUD_04450 38a0d094020c6bda38dd811b510681f1 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 265 381 4.8E-38 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XFUD_04450 38a0d094020c6bda38dd811b510681f1 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 150 233 2.6E-39 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XFUD_04450 38a0d094020c6bda38dd811b510681f1 396 Gene3D G3DSA:3.40.50.720 1 154 1.2E-46 T 11-10-2018 XFUD_04450 38a0d094020c6bda38dd811b510681f1 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 8 136 6.3E-41 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XFUD_04450 38a0d094020c6bda38dd811b510681f1 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 384 3.5E-137 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XFUD_04450 38a0d094020c6bda38dd811b510681f1 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 8 386 45.199 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XFUD_04450 38a0d094020c6bda38dd811b510681f1 396 SUPERFAMILY SSF51735 6 154 1.35E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_04450 38a0d094020c6bda38dd811b510681f1 396 Gene3D G3DSA:1.10.1740.10 306 390 1.8E-27 T 11-10-2018 XFUD_04450 38a0d094020c6bda38dd811b510681f1 396 SUPERFAMILY SSF69055 295 386 1.31E-29 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 XFUD_11300 4ff2057c95087014717f759fe44f29cd 508 Gene3D G3DSA:1.10.3210.10 317 507 1.0E-49 T 11-10-2018 XFUD_11300 4ff2057c95087014717f759fe44f29cd 508 Gene3D G3DSA:3.30.420.150 121 301 1.2E-83 T 11-10-2018 XFUD_11300 4ff2057c95087014717f759fe44f29cd 508 Pfam PF02541 Ppx/GppA phosphatase family 31 314 1.5E-64 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 XFUD_11300 4ff2057c95087014717f759fe44f29cd 508 Gene3D G3DSA:3.30.420.40 18 309 1.2E-83 T 11-10-2018 XFUD_11300 4ff2057c95087014717f759fe44f29cd 508 SUPERFAMILY SSF53067 142 314 2.04E-44 T 11-10-2018 XFUD_11300 4ff2057c95087014717f759fe44f29cd 508 SUPERFAMILY SSF53067 17 137 1.29E-31 T 11-10-2018 XFUD_11300 4ff2057c95087014717f759fe44f29cd 508 PIRSF PIRSF001267 7 508 9.4E-186 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 XFUD_11300 4ff2057c95087014717f759fe44f29cd 508 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 17 312 4.5E-97 T 11-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 XFUD_11300 4ff2057c95087014717f759fe44f29cd 508 SUPERFAMILY SSF109604 319 498 4.54E-45 T 11-10-2018 XFUD_06150 0fb3e3a685ee7fef8b03272507388155 334 Pfam PF02685 Glucokinase 17 329 1.8E-101 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XFUD_06150 0fb3e3a685ee7fef8b03272507388155 334 SUPERFAMILY SSF53067 15 329 1.61E-49 T 11-10-2018 XFUD_06150 0fb3e3a685ee7fef8b03272507388155 334 Gene3D G3DSA:3.30.420.40 16 325 1.6E-89 T 11-10-2018 XFUD_06150 0fb3e3a685ee7fef8b03272507388155 334 Gene3D G3DSA:3.40.367.20 115 314 1.6E-89 T 11-10-2018 XFUD_04075 91baebf0043e0100deb831224dd88df0 200 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 7.5E-57 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFUD_04075 91baebf0043e0100deb831224dd88df0 200 Gene3D G3DSA:2.40.30.20 1 89 2.3E-24 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFUD_04075 91baebf0043e0100deb831224dd88df0 200 SUPERFAMILY SSF63380 1 88 2.04E-22 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XFUD_04075 91baebf0043e0100deb831224dd88df0 200 Pfam PF00677 Lumazine binding domain 100 184 1.6E-23 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFUD_04075 91baebf0043e0100deb831224dd88df0 200 Pfam PF00677 Lumazine binding domain 3 87 1.1E-18 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFUD_04075 91baebf0043e0100deb831224dd88df0 200 SUPERFAMILY SSF63380 93 194 3.06E-31 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XFUD_04075 91baebf0043e0100deb831224dd88df0 200 PIRSF PIRSF000498 1 200 3.2E-73 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFUD_04075 91baebf0043e0100deb831224dd88df0 200 Gene3D G3DSA:2.40.30.20 102 200 4.6E-33 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFUD_09285 3992e134b0f520e96a31221728698f00 572 Pfam PF00999 Sodium/hydrogen exchanger family 12 395 6.2E-83 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 XFUD_09285 3992e134b0f520e96a31221728698f00 572 SUPERFAMILY SSF51735 426 557 4.04E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_09285 3992e134b0f520e96a31221728698f00 572 Gene3D G3DSA:1.20.1530.20 5 409 3.7E-80 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily XFUD_09285 3992e134b0f520e96a31221728698f00 572 Gene3D G3DSA:3.40.50.720 425 568 5.0E-30 T 11-10-2018 XFUD_09285 3992e134b0f520e96a31221728698f00 572 Pfam PF02254 TrkA-N domain 429 542 6.4E-22 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:3.30.420.40 181 367 3.3E-164 T 11-10-2018 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 SUPERFAMILY SSF100920 385 541 1.44E-57 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:2.60.34.10 384 524 2.8E-61 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 Pfam PF00012 Hsp70 protein 4 600 1.1E-257 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:3.90.640.10 230 317 3.3E-164 T 11-10-2018 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 SUPERFAMILY SSF53067 188 383 9.26E-67 T 11-10-2018 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 SUPERFAMILY SSF53067 1 184 1.62E-64 T 11-10-2018 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:3.30.420.40 5 380 3.3E-164 T 11-10-2018 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 36.056 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 9.8E-283 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 Gene3D G3DSA:1.20.1270.10 525 603 4.2E-21 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 366 386 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 199 209 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 139 159 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 335 351 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 389 408 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFUD_10165 dabf62c9961400e55ae6704c477fd023 638 PRINTS PR00301 70kDa heat shock protein signature 470 486 2.9E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 XFUD_11055 5c5dd3986a5e409ab43ae121394a7316 225 Gene3D G3DSA:1.10.10.10 120 223 6.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_11055 5c5dd3986a5e409ab43ae121394a7316 225 SMART SM00862 146 220 1.4E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFUD_11055 5c5dd3986a5e409ab43ae121394a7316 225 SMART SM00448 1 113 1.3E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11055 5c5dd3986a5e409ab43ae121394a7316 225 SUPERFAMILY SSF52172 2 171 1.71E-38 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_11055 5c5dd3986a5e409ab43ae121394a7316 225 Pfam PF00072 Response regulator receiver domain 3 112 2.7E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11055 5c5dd3986a5e409ab43ae121394a7316 225 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-36 T 11-10-2018 XFUD_11055 5c5dd3986a5e409ab43ae121394a7316 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 1.2E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFUD_00530 95457c19f0a96c81c1be45831f4ddb61 368 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 35 321 1.0E-44 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XFUD_00530 95457c19f0a96c81c1be45831f4ddb61 368 Gene3D G3DSA:3.40.50.1100 36 327 3.7E-65 T 11-10-2018 XFUD_00530 95457c19f0a96c81c1be45831f4ddb61 368 Gene3D G3DSA:3.40.50.1100 50 156 3.7E-65 T 11-10-2018 XFUD_00530 95457c19f0a96c81c1be45831f4ddb61 368 SUPERFAMILY SSF53686 3 340 1.83E-65 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XFUD_04185 3ab438bdeb17e026f39e5e30426fa174 764 Gene3D G3DSA:3.40.50.10380 1 161 1.3E-66 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 XFUD_04185 3ab438bdeb17e026f39e5e30426fa174 764 SUPERFAMILY SSF53223 12 162 2.73E-51 T 11-10-2018 XFUD_04185 3ab438bdeb17e026f39e5e30426fa174 764 Gene3D G3DSA:3.40.50.720 162 444 7.0E-79 T 11-10-2018 XFUD_04185 3ab438bdeb17e026f39e5e30426fa174 764 Gene3D G3DSA:3.40.50.10750 571 724 4.5E-84 T 11-10-2018 XFUD_04185 3ab438bdeb17e026f39e5e30426fa174 764 SUPERFAMILY SSF53659 428 751 9.46E-83 T 11-10-2018 XFUD_04185 3ab438bdeb17e026f39e5e30426fa174 764 SMART SM01274 19 152 2.4E-77 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 XFUD_04185 3ab438bdeb17e026f39e5e30426fa174 764 Pfam PF00390 Malic enzyme, N-terminal domain 20 152 1.9E-27 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 XFUD_04185 3ab438bdeb17e026f39e5e30426fa174 764 SMART SM00919 164 399 1.8E-126 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 XFUD_04185 3ab438bdeb17e026f39e5e30426fa174 764 Pfam PF01515 Phosphate acetyl/butaryl transferase 428 748 1.2E-86 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 XFUD_04185 3ab438bdeb17e026f39e5e30426fa174 764 PIRSF PIRSF036684 1 756 0.0 T 11-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 XFUD_04185 3ab438bdeb17e026f39e5e30426fa174 764 SUPERFAMILY SSF51735 164 451 6.81E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_04185 3ab438bdeb17e026f39e5e30426fa174 764 Gene3D G3DSA:3.40.50.10950 445 748 4.5E-84 T 11-10-2018 XFUD_04185 3ab438bdeb17e026f39e5e30426fa174 764 Pfam PF03949 Malic enzyme, NAD binding domain 166 359 2.9E-19 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 XFUD_03180 93476c9f882811156ea81c5b076fc3c9 600 Pfam PF03781 Sulfatase-modifying factor enzyme 1 327 598 9.8E-72 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 XFUD_03180 93476c9f882811156ea81c5b076fc3c9 600 Gene3D G3DSA:3.90.1580.10 315 600 2.8E-69 T 11-10-2018 XFUD_03180 93476c9f882811156ea81c5b076fc3c9 600 SUPERFAMILY SSF56436 326 598 2.83E-66 T 11-10-2018 IPR016187 C-type lectin fold XFUD_08500 4998ddcddc73da8097ec2587cb156bcb 722 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 720 25.134 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08500 4998ddcddc73da8097ec2587cb156bcb 722 Pfam PF05746 DALR anticodon binding domain 614 709 2.3E-6 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 XFUD_08500 4998ddcddc73da8097ec2587cb156bcb 722 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 582 2.2E-187 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08500 4998ddcddc73da8097ec2587cb156bcb 722 SUPERFAMILY SSF109604 345 493 5.73E-14 T 11-10-2018 XFUD_08500 4998ddcddc73da8097ec2587cb156bcb 722 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 5 720 7.8E-201 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08500 4998ddcddc73da8097ec2587cb156bcb 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 53 65 6.3E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08500 4998ddcddc73da8097ec2587cb156bcb 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 320 336 6.3E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08500 4998ddcddc73da8097ec2587cb156bcb 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 6.3E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08500 4998ddcddc73da8097ec2587cb156bcb 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 6.3E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_08500 4998ddcddc73da8097ec2587cb156bcb 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 396 415 6.3E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 XFUD_09185 41654f870b828980b6e4af7b56ad7a12 941 Pfam PF13550 Putative phage tail protein 401 551 5.8E-9 T 11-10-2018 IPR032876 Tip attachment protein J XFUD_09185 41654f870b828980b6e4af7b56ad7a12 941 Gene3D G3DSA:3.40.50.410 153 336 8.6E-13 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily XFUD_09185 41654f870b828980b6e4af7b56ad7a12 941 SUPERFAMILY SSF53300 153 304 9.05E-13 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily XFUD_08345 e920b67eb2ee50663150e1b04e61afd4 289 Gene3D G3DSA:3.20.20.70 129 271 2.2E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_08345 e920b67eb2ee50663150e1b04e61afd4 289 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 15 281 5.2E-96 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 XFUD_08345 e920b67eb2ee50663150e1b04e61afd4 289 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 26 113 1.3E-26 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 XFUD_08345 e920b67eb2ee50663150e1b04e61afd4 289 Gene3D G3DSA:3.90.1170.20 18 279 2.2E-100 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 XFUD_08345 e920b67eb2ee50663150e1b04e61afd4 289 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 115 280 8.0E-59 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 XFUD_08345 e920b67eb2ee50663150e1b04e61afd4 289 SUPERFAMILY SSF51690 115 281 2.63E-58 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XFUD_08345 e920b67eb2ee50663150e1b04e61afd4 289 SUPERFAMILY SSF54675 2 114 1.57E-31 T 11-10-2018 XFUD_08345 e920b67eb2ee50663150e1b04e61afd4 289 PIRSF PIRSF006250 8 284 5.7E-94 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 XFUD_03295 063380736ae0d9860412f0b296943b9c 788 Gene3D G3DSA:1.20.1640.10 210 398 3.5E-5 T 11-10-2018 XFUD_03295 063380736ae0d9860412f0b296943b9c 788 Pfam PF03176 MMPL family 202 418 2.7E-6 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 XFUD_03295 063380736ae0d9860412f0b296943b9c 788 SUPERFAMILY SSF82866 628 770 1.44E-15 T 11-10-2018 XFUD_03295 063380736ae0d9860412f0b296943b9c 788 SUPERFAMILY SSF82866 217 392 1.83E-19 T 11-10-2018 XFUD_11270 69cb8b6388e24d4b83315a33ddc75f5b 266 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 XFUD_11270 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.8E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11270 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.8E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11270 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.8E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11270 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.8E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11270 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.8E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11270 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.8E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11270 69cb8b6388e24d4b83315a33ddc75f5b 266 Gene3D G3DSA:1.10.287.610 103 150 3.5E-86 T 11-10-2018 XFUD_11270 69cb8b6388e24d4b83315a33ddc75f5b 266 Pfam PF00318 Ribosomal protein S2 9 224 1.9E-88 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11270 69cb8b6388e24d4b83315a33ddc75f5b 266 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 39.201 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11270 69cb8b6388e24d4b83315a33ddc75f5b 266 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 XFUD_11270 69cb8b6388e24d4b83315a33ddc75f5b 266 SUPERFAMILY SSF52313 6 231 6.67E-89 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily XFUD_11270 69cb8b6388e24d4b83315a33ddc75f5b 266 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 3.5E-96 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11270 69cb8b6388e24d4b83315a33ddc75f5b 266 Gene3D G3DSA:3.40.50.10490 8 219 3.5E-86 T 11-10-2018 XFUD_03980 48b0893b79807b0f394d425249d92d8b 307 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFUD_03980 48b0893b79807b0f394d425249d92d8b 307 Gene3D G3DSA:3.40.50.170 1 205 1.5E-73 T 11-10-2018 XFUD_03980 48b0893b79807b0f394d425249d92d8b 307 SUPERFAMILY SSF53328 1 205 5.76E-62 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFUD_03980 48b0893b79807b0f394d425249d92d8b 307 Gene3D G3DSA:3.10.25.10 206 307 2.1E-28 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFUD_03980 48b0893b79807b0f394d425249d92d8b 307 SUPERFAMILY SSF50486 205 302 8.44E-28 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 XFUD_03980 48b0893b79807b0f394d425249d92d8b 307 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 302 7.4E-89 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 XFUD_03980 48b0893b79807b0f394d425249d92d8b 307 Pfam PF02911 Formyl transferase, C-terminal domain 203 299 4.6E-24 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFUD_03980 48b0893b79807b0f394d425249d92d8b 307 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 303 35.754 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 XFUD_03980 48b0893b79807b0f394d425249d92d8b 307 Pfam PF00551 Formyl transferase 10 176 2.9E-43 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFUD_01310 0da80406e93213792ecbdb1aa10a10ec 132 Pfam PF03840 Preprotein translocase SecG subunit 3 70 2.2E-20 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XFUD_01310 0da80406e93213792ecbdb1aa10a10ec 132 PRINTS PR01651 Protein-export SecG membrane protein signature 2 22 3.8E-34 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XFUD_01310 0da80406e93213792ecbdb1aa10a10ec 132 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 3.8E-34 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XFUD_01310 0da80406e93213792ecbdb1aa10a10ec 132 PRINTS PR01651 Protein-export SecG membrane protein signature 37 53 3.8E-34 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XFUD_01310 0da80406e93213792ecbdb1aa10a10ec 132 PRINTS PR01651 Protein-export SecG membrane protein signature 22 36 3.8E-34 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XFUD_01310 0da80406e93213792ecbdb1aa10a10ec 132 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 71 7.8E-24 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 XFUD_09305 ec13b5865489b2c9bf1518b878285e6e 276 SUPERFAMILY SSF52540 30 263 2.61E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_09305 ec13b5865489b2c9bf1518b878285e6e 276 SMART SM00382 54 257 6.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_09305 ec13b5865489b2c9bf1518b878285e6e 276 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_09305 ec13b5865489b2c9bf1518b878285e6e 276 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 30 276 1.3E-118 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 XFUD_09305 ec13b5865489b2c9bf1518b878285e6e 276 Pfam PF00005 ABC transporter 45 201 8.1E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_09305 ec13b5865489b2c9bf1518b878285e6e 276 Gene3D G3DSA:3.40.50.300 29 274 1.0E-67 T 11-10-2018 XFUD_07115 02fa243ed226a79e36301481c2010a1c 165 Gene3D G3DSA:1.10.530.40 1 147 1.9E-51 T 11-10-2018 XFUD_07115 02fa243ed226a79e36301481c2010a1c 165 Pfam PF00959 Phage lysozyme 30 137 5.3E-21 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XFUD_07115 02fa243ed226a79e36301481c2010a1c 165 SUPERFAMILY SSF53955 5 149 8.7E-49 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_06625 02fa243ed226a79e36301481c2010a1c 165 Gene3D G3DSA:1.10.530.40 1 147 1.9E-51 T 11-10-2018 XFUD_06625 02fa243ed226a79e36301481c2010a1c 165 Pfam PF00959 Phage lysozyme 30 137 5.3E-21 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XFUD_06625 02fa243ed226a79e36301481c2010a1c 165 SUPERFAMILY SSF53955 5 149 8.7E-49 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_05370 34daea6003ab24c035eeb3cfa2bb4e10 229 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 88 141 2.0E-24 T 11-10-2018 XFUD_05370 34daea6003ab24c035eeb3cfa2bb4e10 229 Pfam PF03099 Biotin/lipoate A/B protein ligase family 74 172 9.7E-9 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 XFUD_05370 34daea6003ab24c035eeb3cfa2bb4e10 229 SUPERFAMILY SSF55681 18 216 5.22E-67 T 11-10-2018 XFUD_05370 34daea6003ab24c035eeb3cfa2bb4e10 229 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 84 99 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 XFUD_05370 34daea6003ab24c035eeb3cfa2bb4e10 229 Gene3D G3DSA:3.30.930.10 15 217 2.7E-63 T 11-10-2018 XFUD_05370 34daea6003ab24c035eeb3cfa2bb4e10 229 PIRSF PIRSF016262 16 225 2.8E-57 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XFUD_05370 34daea6003ab24c035eeb3cfa2bb4e10 229 Hamap MF_00013 Octanoyltransferase [lipB]. 18 219 37.605 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XFUD_05370 34daea6003ab24c035eeb3cfa2bb4e10 229 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 40 214 3.7E-62 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XFUD_10380 0dffd000dafc4aa177a84d00d6ef4718 720 Gene3D G3DSA:1.20.1560.10 152 465 2.3E-76 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XFUD_10380 0dffd000dafc4aa177a84d00d6ef4718 720 Gene3D G3DSA:3.90.70.10 21 148 1.6E-23 T 11-10-2018 XFUD_10380 0dffd000dafc4aa177a84d00d6ef4718 720 Gene3D G3DSA:3.40.50.300 474 718 1.4E-91 T 11-10-2018 XFUD_10380 0dffd000dafc4aa177a84d00d6ef4718 720 SMART SM00382 505 691 1.3E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_10380 0dffd000dafc4aa177a84d00d6ef4718 720 Pfam PF03412 Peptidase C39 family 18 140 4.8E-12 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 XFUD_10380 0dffd000dafc4aa177a84d00d6ef4718 720 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 24 717 0.0 T 11-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 XFUD_10380 0dffd000dafc4aa177a84d00d6ef4718 720 Pfam PF00664 ABC transporter transmembrane region 168 434 5.2E-52 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XFUD_10380 0dffd000dafc4aa177a84d00d6ef4718 720 ProSitePatterns PS00211 ABC transporters family signature. 617 631 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_10380 0dffd000dafc4aa177a84d00d6ef4718 720 SUPERFAMILY SSF52540 469 716 1.54E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_10380 0dffd000dafc4aa177a84d00d6ef4718 720 SUPERFAMILY SSF90123 153 460 4.97E-66 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XFUD_10380 0dffd000dafc4aa177a84d00d6ef4718 720 Pfam PF00005 ABC transporter 497 645 3.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_01750 e150d3042140cf66a18fae2686ccbd8c 180 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 7 150 5.2E-50 T 11-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 XFUD_01750 e150d3042140cf66a18fae2686ccbd8c 180 Pfam PF02470 MlaD protein 41 119 6.9E-21 T 11-10-2018 IPR003399 Mce/MlaD XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 SUPERFAMILY SSF88946 121 450 4.08E-94 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 Gene3D G3DSA:1.10.601.10 119 452 7.2E-113 T 11-10-2018 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 SUPERFAMILY SSF88659 513 615 7.2E-28 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 Gene3D G3DSA:1.10.220.120 5 67 3.5E-27 T 11-10-2018 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 Pfam PF04546 Sigma-70, non-essential region 145 352 1.3E-49 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 407 420 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 379 604 9.8E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 Pfam PF03979 Sigma-70 factor, region 1.1 7 87 1.9E-28 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 Pfam PF04545 Sigma-70, region 4 551 604 1.8E-19 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 379 615 5.5E-119 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 SUPERFAMILY SSF88659 456 529 2.78E-21 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 PRINTS PR00046 Major sigma-70 factor signature 576 591 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 PRINTS PR00046 Major sigma-70 factor signature 591 602 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 PRINTS PR00046 Major sigma-70 factor signature 555 567 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 PRINTS PR00046 Major sigma-70 factor signature 407 420 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 PRINTS PR00046 Major sigma-70 factor signature 431 439 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 616 47.253 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 Gene3D G3DSA:1.10.10.10 456 532 3.9E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 Pfam PF04542 Sigma-70 region 2 383 452 3.3E-20 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 Pfam PF04539 Sigma-70 region 3 462 537 1.3E-30 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 Gene3D G3DSA:1.10.10.10 533 616 2.1E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 576 602 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFUD_05685 50d77cc7b76aeacae85a439bbd38b594 618 Pfam PF00140 Sigma-70 factor, region 1.2 104 135 5.1E-13 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XFUD_01535 5f0c724fe9cfb8c8c7507278294b825d 240 Gene3D G3DSA:3.30.1330.60 89 234 5.4E-47 T 11-10-2018 IPR036737 OmpA-like domain superfamily XFUD_01535 5f0c724fe9cfb8c8c7507278294b825d 240 Pfam PF13488 Glycine zipper 50 95 1.5E-11 T 11-10-2018 IPR039567 Glycine zipper domain XFUD_01535 5f0c724fe9cfb8c8c7507278294b825d 240 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 189 208 1.6E-9 T 11-10-2018 XFUD_01535 5f0c724fe9cfb8c8c7507278294b825d 240 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 209 229 1.6E-9 T 11-10-2018 XFUD_01535 5f0c724fe9cfb8c8c7507278294b825d 240 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 171 188 1.6E-9 T 11-10-2018 XFUD_01535 5f0c724fe9cfb8c8c7507278294b825d 240 PRINTS PR01021 OMPA domain signature 171 187 1.1E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFUD_01535 5f0c724fe9cfb8c8c7507278294b825d 240 PRINTS PR01021 OMPA domain signature 126 148 1.1E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFUD_01535 5f0c724fe9cfb8c8c7507278294b825d 240 PRINTS PR01021 OMPA domain signature 156 171 1.1E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFUD_01535 5f0c724fe9cfb8c8c7507278294b825d 240 Pfam PF00691 OmpA family 125 220 2.4E-22 T 11-10-2018 IPR006665 OmpA-like domain XFUD_01535 5f0c724fe9cfb8c8c7507278294b825d 240 SUPERFAMILY SSF103088 113 228 1.44E-39 T 11-10-2018 IPR036737 OmpA-like domain superfamily XFUD_01535 5f0c724fe9cfb8c8c7507278294b825d 240 ProSitePatterns PS01068 OmpA-like domain. 158 202 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 XFUD_00610 87737846d500b59c35b0c23944930adc 248 Pfam PF05036 Sporulation related domain 173 245 3.4E-15 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 XFUD_00610 87737846d500b59c35b0c23944930adc 248 Gene3D G3DSA:3.30.70.1070 167 248 6.7E-18 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XFUD_00610 87737846d500b59c35b0c23944930adc 248 SUPERFAMILY SSF110997 172 246 9.42E-17 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XFUD_03125 0611e38bb0b3fc182f0b27e2f53d4435 159 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 3 158 3.5E-61 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XFUD_03125 0611e38bb0b3fc182f0b27e2f53d4435 159 ProSitePatterns PS00938 Initiation factor 3 signature. 46 59 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 XFUD_03125 0611e38bb0b3fc182f0b27e2f53d4435 159 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 71 155 2.8E-35 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 XFUD_03125 0611e38bb0b3fc182f0b27e2f53d4435 159 SUPERFAMILY SSF55200 71 158 4.97E-30 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 XFUD_03125 0611e38bb0b3fc182f0b27e2f53d4435 159 Gene3D G3DSA:3.10.20.80 1 63 2.9E-28 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XFUD_03125 0611e38bb0b3fc182f0b27e2f53d4435 159 SUPERFAMILY SSF54364 2 66 1.02E-25 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XFUD_03125 0611e38bb0b3fc182f0b27e2f53d4435 159 Gene3D G3DSA:3.30.110.10 64 159 3.4E-36 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 XFUD_03125 0611e38bb0b3fc182f0b27e2f53d4435 159 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 64 4.4E-26 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XFUD_03125 0611e38bb0b3fc182f0b27e2f53d4435 159 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 158 27.826 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 XFUD_00150 f44f49b6a0dbe52e6c710223152a5f44 400 Gene3D G3DSA:3.90.1150.10 7 394 2.8E-149 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFUD_00150 f44f49b6a0dbe52e6c710223152a5f44 400 Pfam PF00155 Aminotransferase class I and II 28 394 2.1E-75 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XFUD_00150 f44f49b6a0dbe52e6c710223152a5f44 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 XFUD_00150 f44f49b6a0dbe52e6c710223152a5f44 400 SUPERFAMILY SSF53383 3 397 5.69E-109 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFUD_00150 f44f49b6a0dbe52e6c710223152a5f44 400 PRINTS PR00799 Aspartate aminotransferase signature 208 220 1.2E-33 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XFUD_00150 f44f49b6a0dbe52e6c710223152a5f44 400 PRINTS PR00799 Aspartate aminotransferase signature 276 301 1.2E-33 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XFUD_00150 f44f49b6a0dbe52e6c710223152a5f44 400 PRINTS PR00799 Aspartate aminotransferase signature 343 361 1.2E-33 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XFUD_00150 f44f49b6a0dbe52e6c710223152a5f44 400 PRINTS PR00799 Aspartate aminotransferase signature 177 196 1.2E-33 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 XFUD_00150 f44f49b6a0dbe52e6c710223152a5f44 400 Gene3D G3DSA:3.40.640.10 62 303 2.8E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFUD_11825 6808caf975d3ae85fc22a1f7d841ca32 467 SUPERFAMILY SSF116734 218 437 1.11E-36 T 11-10-2018 XFUD_11825 6808caf975d3ae85fc22a1f7d841ca32 467 Pfam PF01420 Type I restriction modification DNA specificity domain 318 410 2.3E-5 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XFUD_11825 6808caf975d3ae85fc22a1f7d841ca32 467 SUPERFAMILY SSF116734 8 215 5.07E-26 T 11-10-2018 XFUD_11825 6808caf975d3ae85fc22a1f7d841ca32 467 Gene3D G3DSA:3.90.220.20 11 213 7.3E-21 T 11-10-2018 XFUD_11825 6808caf975d3ae85fc22a1f7d841ca32 467 Gene3D G3DSA:3.90.220.20 222 429 1.0E-33 T 11-10-2018 XFUD_08305 8922732cd523daa930869e7c6266795a 172 Pfam PF00583 Acetyltransferase (GNAT) family 29 144 3.3E-7 T 11-10-2018 IPR000182 GNAT domain XFUD_08305 8922732cd523daa930869e7c6266795a 172 SUPERFAMILY SSF55729 44 147 1.14E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFUD_08305 8922732cd523daa930869e7c6266795a 172 Gene3D G3DSA:3.40.630.30 7 161 6.7E-7 T 11-10-2018 XFUD_07900 170e6b61b11d7a6049edee73d3ce1280 727 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 555 702 6.3E-32 T 11-10-2018 IPR020992 Tail specific protease, C-terminal XFUD_07900 170e6b61b11d7a6049edee73d3ce1280 727 Gene3D G3DSA:2.30.42.10 238 322 5.0E-12 T 11-10-2018 XFUD_07900 170e6b61b11d7a6049edee73d3ce1280 727 SUPERFAMILY SSF52096 171 554 2.32E-67 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFUD_07900 170e6b61b11d7a6049edee73d3ce1280 727 Pfam PF03572 Peptidase family S41 366 548 2.5E-53 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XFUD_07900 170e6b61b11d7a6049edee73d3ce1280 727 Gene3D G3DSA:3.90.226.10 328 569 2.0E-59 T 11-10-2018 XFUD_07900 170e6b61b11d7a6049edee73d3ce1280 727 SMART SM00245 330 550 4.8E-48 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XFUD_07900 170e6b61b11d7a6049edee73d3ce1280 727 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 242 320 1.2E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFUD_07900 170e6b61b11d7a6049edee73d3ce1280 727 SUPERFAMILY SSF50156 247 319 2.51E-10 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFUD_07900 170e6b61b11d7a6049edee73d3ce1280 727 SMART SM00228 247 325 6.4E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFUD_07900 170e6b61b11d7a6049edee73d3ce1280 727 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 204 569 6.0E-88 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 XFUD_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 300 9.5E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 5.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 5.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 415 5.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 Pfam PF08521 Two-component sensor kinase N-terminal 26 166 5.7E-37 T 11-10-2018 IPR013727 Two-component sensor kinase, N-terminal XFUD_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 Gene3D G3DSA:1.10.287.130 194 308 5.2E-15 T 11-10-2018 XFUD_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 456 1.1E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 SMART SM00387 352 459 4.3E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 SMART SM00388 242 307 9.5E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 Gene3D G3DSA:3.30.565.10 311 459 2.9E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 SUPERFAMILY SSF47384 225 300 5.89E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFUD_01410 9dabc59d8309ccdf417a6e2f4c5561f3 460 SUPERFAMILY SSF55874 312 458 7.33E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_00455 d675dea097e2a659647e1cd7059c701e 261 SUPERFAMILY SSF75217 1 249 2.42E-93 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases XFUD_00455 d675dea097e2a659647e1cd7059c701e 261 Gene3D G3DSA:3.40.1280.10 1 165 3.8E-60 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XFUD_00455 d675dea097e2a659647e1cd7059c701e 261 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 229 3.1E-82 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XFUD_00455 d675dea097e2a659647e1cd7059c701e 261 Gene3D G3DSA:1.10.1270.20 166 257 1.1E-27 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XFUD_00455 d675dea097e2a659647e1cd7059c701e 261 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 261 103.107 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XFUD_00455 d675dea097e2a659647e1cd7059c701e 261 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 4.9E-53 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XFUD_00455 d675dea097e2a659647e1cd7059c701e 261 PIRSF PIRSF000386 1 256 7.6E-89 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 XFUD_02465 afce732145eafa58efe9ab2275b12546 240 Gene3D G3DSA:3.90.550.10 1 236 3.2E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_02465 afce732145eafa58efe9ab2275b12546 240 Pfam PF00483 Nucleotidyl transferase 2 118 4.4E-11 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XFUD_02465 afce732145eafa58efe9ab2275b12546 240 SUPERFAMILY SSF53448 1 233 6.31E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_04995 66784cb60b93b02f33e7644955ac6218 86 Pfam PF04380 Membrane fusogenic activity 1 77 1.7E-20 T 11-10-2018 IPR007475 Membrane fusogenic activity XFUD_12290 9ad7a8dd2d341058aed727ece737f25e 108 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 103 3.8E-23 T 11-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 XFUD_12290 9ad7a8dd2d341058aed727ece737f25e 108 Gene3D G3DSA:2.30.30.110 1 108 3.2E-27 T 11-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor XFUD_12290 9ad7a8dd2d341058aed727ece737f25e 108 SUPERFAMILY SSF50118 2 106 8.94E-28 T 11-10-2018 XFUD_12290 9ad7a8dd2d341058aed727ece737f25e 108 PIRSF PIRSF033490 1 106 1.9E-32 T 11-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 XFUD_07475 05bd0163b99e7110ed5a07dfa1a35131 346 Pfam PF07859 alpha/beta hydrolase fold 119 320 1.0E-43 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 XFUD_07475 05bd0163b99e7110ed5a07dfa1a35131 346 SUPERFAMILY SSF53474 53 346 4.37E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_07475 05bd0163b99e7110ed5a07dfa1a35131 346 Gene3D G3DSA:3.40.50.1820 25 346 6.0E-79 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_00450 7afc178bf5ed48e1938e9abfd562f251 170 Pfam PF01782 RimM N-terminal domain 10 92 1.4E-21 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 XFUD_00450 7afc178bf5ed48e1938e9abfd562f251 170 Gene3D G3DSA:2.30.30.240 97 170 1.4E-26 T 11-10-2018 XFUD_00450 7afc178bf5ed48e1938e9abfd562f251 170 SUPERFAMILY SSF50447 8 95 9.89E-19 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFUD_00450 7afc178bf5ed48e1938e9abfd562f251 170 Gene3D G3DSA:2.40.30.60 1 95 3.6E-24 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 XFUD_00450 7afc178bf5ed48e1938e9abfd562f251 170 SUPERFAMILY SSF50346 101 170 4.12E-18 T 11-10-2018 IPR011033 PRC-barrel-like superfamily XFUD_00450 7afc178bf5ed48e1938e9abfd562f251 170 Pfam PF05239 PRC-barrel domain 98 165 5.7E-6 T 11-10-2018 IPR027275 PRC-barrel domain XFUD_00450 7afc178bf5ed48e1938e9abfd562f251 170 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 169 5.3E-48 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 XFUD_00450 7afc178bf5ed48e1938e9abfd562f251 170 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 170 24.001 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 XFUD_05735 276cdcc8ae6f001fa50d3ad260d8bcc1 649 SUPERFAMILY SSF53955 477 633 1.47E-48 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_05735 276cdcc8ae6f001fa50d3ad260d8bcc1 649 Gene3D G3DSA:1.25.20.10 27 380 5.4E-79 T 11-10-2018 XFUD_05735 276cdcc8ae6f001fa50d3ad260d8bcc1 649 SUPERFAMILY SSF48435 25 474 2.88E-102 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 XFUD_05735 276cdcc8ae6f001fa50d3ad260d8bcc1 649 Pfam PF01464 Transglycosylase SLT domain 481 594 1.3E-26 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 XFUD_05735 276cdcc8ae6f001fa50d3ad260d8bcc1 649 Gene3D G3DSA:1.10.530.10 471 637 4.7E-49 T 11-10-2018 XFUD_05735 276cdcc8ae6f001fa50d3ad260d8bcc1 649 Pfam PF14718 Soluble lytic murein transglycosylase L domain 402 460 3.5E-9 T 11-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 XFUD_03475 cb886c97dd23d81111b5d96602d7ccbf 169 Gene3D G3DSA:1.10.10.10 14 102 4.5E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_03475 cb886c97dd23d81111b5d96602d7ccbf 169 Gene3D G3DSA:3.30.1490.190 105 163 2.1E-14 T 11-10-2018 XFUD_03475 cb886c97dd23d81111b5d96602d7ccbf 169 Pfam PF01475 Ferric uptake regulator family 30 152 7.8E-11 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 XFUD_03475 cb886c97dd23d81111b5d96602d7ccbf 169 SUPERFAMILY SSF46785 25 157 7.44E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_06805 d2d9788106ae29a9c81e53f40d3faffc 291 SUPERFAMILY SSF52540 6 227 2.37E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_06805 d2d9788106ae29a9c81e53f40d3faffc 291 SMART SM00382 34 212 2.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_06805 d2d9788106ae29a9c81e53f40d3faffc 291 Gene3D G3DSA:3.40.50.300 2 237 1.1E-40 T 11-10-2018 XFUD_06805 d2d9788106ae29a9c81e53f40d3faffc 291 Pfam PF00005 ABC transporter 26 162 1.1E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_09270 6f4689bbf6473404e8ec3db427f35ef5 223 Pfam PF01323 DSBA-like thioredoxin domain 9 208 2.8E-51 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 XFUD_09270 6f4689bbf6473404e8ec3db427f35ef5 223 Gene3D G3DSA:3.40.30.10 6 210 7.4E-60 T 11-10-2018 XFUD_09270 6f4689bbf6473404e8ec3db427f35ef5 223 SUPERFAMILY SSF52833 7 213 1.66E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_05470 85fa7e6f494e688a1f04c692019480b9 547 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 446 545 6.9E-43 T 11-10-2018 XFUD_05470 85fa7e6f494e688a1f04c692019480b9 547 Gene3D G3DSA:3.30.9.90 86 433 1.4E-159 T 11-10-2018 XFUD_05470 85fa7e6f494e688a1f04c692019480b9 547 Gene3D G3DSA:3.50.50.60 18 383 1.4E-159 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_05470 85fa7e6f494e688a1f04c692019480b9 547 Pfam PF01946 Thi4 family 15 62 1.0E-6 T 11-10-2018 XFUD_05470 85fa7e6f494e688a1f04c692019480b9 547 SUPERFAMILY SSF51905 12 388 1.85E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_05470 85fa7e6f494e688a1f04c692019480b9 547 SUPERFAMILY SSF54373 215 309 3.02E-30 T 11-10-2018 XFUD_05470 85fa7e6f494e688a1f04c692019480b9 547 SUPERFAMILY SSF54862 447 546 4.43E-24 T 11-10-2018 XFUD_05470 85fa7e6f494e688a1f04c692019480b9 547 Gene3D G3DSA:3.30.70.20 446 542 3.2E-34 T 11-10-2018 XFUD_07795 017ba291b16e10e5ee7cef06b55cb407 190 Gene3D G3DSA:2.40.160.10 16 125 2.3E-6 T 11-10-2018 IPR023614 Porin domain superfamily XFUD_07795 017ba291b16e10e5ee7cef06b55cb407 190 SUPERFAMILY SSF56935 15 155 2.42E-7 T 11-10-2018 XFUD_07795 017ba291b16e10e5ee7cef06b55cb407 190 TIGRFAM TIGR04273 Y_sulf_Ax21: sulfation-dependent quorum factor, Ax21 family 6 190 2.1E-91 T 11-10-2018 IPR026364 Ax21 family XFUD_00810 55dcfef69da2c663c41b92945f2dc25b 485 Gene3D G3DSA:3.90.1150.10 27 468 1.2E-149 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFUD_00810 55dcfef69da2c663c41b92945f2dc25b 485 SUPERFAMILY SSF53383 26 479 5.29E-121 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFUD_00810 55dcfef69da2c663c41b92945f2dc25b 485 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 31 478 1.3E-159 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 XFUD_00810 55dcfef69da2c663c41b92945f2dc25b 485 Pfam PF00202 Aminotransferase class-III 46 476 6.6E-113 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFUD_00810 55dcfef69da2c663c41b92945f2dc25b 485 Gene3D G3DSA:3.40.640.10 82 376 1.2E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFUD_00810 55dcfef69da2c663c41b92945f2dc25b 485 PIRSF PIRSF000521 47 453 3.1E-24 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 SUPERFAMILY SSF53633 20 314 3.67E-73 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 SUPERFAMILY SSF55021 321 395 6.41E-19 T 11-10-2018 XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 SUPERFAMILY SSF51735 479 651 6.09E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 Gene3D G3DSA:3.30.360.10 640 810 8.0E-124 T 11-10-2018 XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 Gene3D G3DSA:3.40.1160.10 20 315 1.0E-91 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 Pfam PF00742 Homoserine dehydrogenase 629 825 1.0E-50 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 ProSitePatterns PS00324 Aspartokinase signature. 22 30 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 PIRSF PIRSF000727 20 832 0.0 T 11-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 487 621 1.7E-22 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 Gene3D G3DSA:3.30.2130.10 318 475 1.2E-44 T 11-10-2018 XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 Pfam PF00696 Amino acid kinase family 20 300 8.9E-46 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 675 697 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 Pfam PF13840 ACT domain 409 469 3.3E-7 T 11-10-2018 IPR027795 CASTOR, ACT domain XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 Pfam PF13840 ACT domain 328 389 1.9E-7 T 11-10-2018 IPR027795 CASTOR, ACT domain XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 20 474 2.8E-108 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 SUPERFAMILY SSF55347 629 812 1.5E-48 T 11-10-2018 XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 SUPERFAMILY SSF55021 402 490 4.94E-22 T 11-10-2018 XFUD_09700 45b56f6a7e3e22e51f1853236c017ca8 835 Gene3D G3DSA:3.40.50.720 482 828 8.0E-124 T 11-10-2018 XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 Gene3D G3DSA:3.30.1490.20 121 190 1.2E-24 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 Gene3D G3DSA:3.90.600.10 331 434 1.1E-28 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 SUPERFAMILY SSF51246 329 424 7.85E-28 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 SUPERFAMILY SSF52440 1 103 4.46E-35 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 8.0E-34 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 41.336 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 Gene3D G3DSA:3.40.50.20 2 95 2.4E-36 T 11-10-2018 XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.6E-77 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 4.2E-25 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 SUPERFAMILY SSF56059 104 323 1.63E-64 T 11-10-2018 XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 Gene3D G3DSA:3.30.470.20 191 329 4.4E-57 T 11-10-2018 XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 SMART SM01209 103 296 2.4E-132 T 11-10-2018 XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 SMART SM01210 330 423 1.9E-45 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFUD_08565 c19261b45eec559c5a37bbbd475983d3 437 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.1E-164 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFUD_05595 001c597989e4c770475e05e531e1c010 189 Pfam PF04264 YceI-like domain 47 181 2.3E-24 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XFUD_05595 001c597989e4c770475e05e531e1c010 189 SUPERFAMILY SSF101874 31 187 4.71E-33 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XFUD_05595 001c597989e4c770475e05e531e1c010 189 Gene3D G3DSA:2.40.128.110 48 189 1.3E-29 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XFUD_05595 001c597989e4c770475e05e531e1c010 189 SMART SM00867 29 187 3.0E-31 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XFUD_11185 5dde0ee8def9ea9424ff6b1de4bd9566 76 SUPERFAMILY SSF46911 3 74 1.05E-28 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11185 5dde0ee8def9ea9424ff6b1de4bd9566 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 9.2E-36 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11185 5dde0ee8def9ea9424ff6b1de4bd9566 76 Gene3D G3DSA:4.10.640.10 20 75 1.3E-26 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11185 5dde0ee8def9ea9424ff6b1de4bd9566 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 5.0E-23 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11185 5dde0ee8def9ea9424ff6b1de4bd9566 76 Pfam PF01084 Ribosomal protein S18 18 68 1.5E-24 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11185 5dde0ee8def9ea9424ff6b1de4bd9566 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.951 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11185 5dde0ee8def9ea9424ff6b1de4bd9566 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11185 5dde0ee8def9ea9424ff6b1de4bd9566 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11185 5dde0ee8def9ea9424ff6b1de4bd9566 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11185 5dde0ee8def9ea9424ff6b1de4bd9566 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11185 5dde0ee8def9ea9424ff6b1de4bd9566 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_03900 35610dce9e3f5acd22184924e221070c 253 PRINTS PR00603 Cytochrome C1 signature 199 218 3.0E-10 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 XFUD_03900 35610dce9e3f5acd22184924e221070c 253 PRINTS PR00603 Cytochrome C1 signature 52 71 3.0E-10 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 XFUD_03900 35610dce9e3f5acd22184924e221070c 253 PRINTS PR00603 Cytochrome C1 signature 114 138 3.0E-10 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 XFUD_03900 35610dce9e3f5acd22184924e221070c 253 Pfam PF02167 Cytochrome C1 family 44 251 6.0E-24 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 XFUD_03900 35610dce9e3f5acd22184924e221070c 253 Gene3D G3DSA:1.10.760.10 36 218 6.4E-24 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 XFUD_03900 35610dce9e3f5acd22184924e221070c 253 SUPERFAMILY SSF46626 27 217 2.06E-46 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 XFUD_02395 53759eedd575f13fd8fea8d0b7239ef6 299 SUPERFAMILY SSF52402 37 265 2.65E-54 T 11-10-2018 XFUD_02395 53759eedd575f13fd8fea8d0b7239ef6 299 PIRSF PIRSF004976 3 294 2.3E-70 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 XFUD_02395 53759eedd575f13fd8fea8d0b7239ef6 299 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 6 280 54.821 T 11-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 XFUD_02395 53759eedd575f13fd8fea8d0b7239ef6 299 Pfam PF01171 PP-loop family 50 213 2.9E-16 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 XFUD_02395 53759eedd575f13fd8fea8d0b7239ef6 299 Gene3D G3DSA:3.40.50.620 11 280 3.0E-47 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_04570 0566e881149ee7b07c4fb99efe851187 82 SUPERFAMILY SSF109910 3 79 5.36E-21 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily XFUD_04570 0566e881149ee7b07c4fb99efe851187 82 Gene3D G3DSA:1.10.150.250 1 81 8.2E-25 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily XFUD_04570 0566e881149ee7b07c4fb99efe851187 82 Pfam PF03937 Flavinator of succinate dehydrogenase 8 75 1.4E-20 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase XFUD_01505 b2e0807d5b46125af57f51495928e189 718 SUPERFAMILY SSF52540 463 679 3.85E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01505 b2e0807d5b46125af57f51495928e189 718 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 37 686 1.5E-210 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 XFUD_01505 b2e0807d5b46125af57f51495928e189 718 SMART SM00487 276 470 1.8E-26 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_01505 b2e0807d5b46125af57f51495928e189 718 SUPERFAMILY SSF50249 16 183 1.88E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_01505 b2e0807d5b46125af57f51495928e189 718 Pfam PF00271 Helicase conserved C-terminal domain 534 613 8.4E-17 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_01505 b2e0807d5b46125af57f51495928e189 718 SUPERFAMILY SSF52540 196 464 3.76E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01505 b2e0807d5b46125af57f51495928e189 718 Pfam PF17191 RecG wedge domain 24 181 1.3E-12 T 11-10-2018 IPR033454 RecG, wedge domain XFUD_01505 b2e0807d5b46125af57f51495928e189 718 Gene3D G3DSA:3.40.50.300 468 655 4.2E-54 T 11-10-2018 XFUD_01505 b2e0807d5b46125af57f51495928e189 718 SMART SM00490 530 614 8.3E-23 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_01505 b2e0807d5b46125af57f51495928e189 718 Pfam PF00270 DEAD/DEAH box helicase 282 416 2.6E-15 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFUD_01505 b2e0807d5b46125af57f51495928e189 718 Gene3D G3DSA:3.40.50.300 220 461 5.0E-76 T 11-10-2018 XFUD_01505 b2e0807d5b46125af57f51495928e189 718 Gene3D G3DSA:2.40.50.140 55 149 4.5E-8 T 11-10-2018 XFUD_06460 f73da2475097c500aac0e524755d1cee 775 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 692 725 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 XFUD_06460 f73da2475097c500aac0e524755d1cee 775 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 108 756 4.2E-173 T 11-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 XFUD_06460 f73da2475097c500aac0e524755d1cee 775 Gene3D G3DSA:3.30.1370.120 105 260 6.6E-26 T 11-10-2018 IPR038591 NolW-like superfamily XFUD_06460 f73da2475097c500aac0e524755d1cee 775 Pfam PF00263 Bacterial type II and III secretion system protein 571 747 4.3E-43 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 XFUD_06460 f73da2475097c500aac0e524755d1cee 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 567 591 1.3E-14 T 11-10-2018 IPR001775 GspD/PilQ family XFUD_06460 f73da2475097c500aac0e524755d1cee 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 711 729 1.3E-14 T 11-10-2018 IPR001775 GspD/PilQ family XFUD_06460 f73da2475097c500aac0e524755d1cee 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 484 494 1.3E-14 T 11-10-2018 IPR001775 GspD/PilQ family XFUD_06460 f73da2475097c500aac0e524755d1cee 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 734 748 1.3E-14 T 11-10-2018 IPR001775 GspD/PilQ family XFUD_06460 f73da2475097c500aac0e524755d1cee 775 Pfam PF03958 Bacterial type II/III secretion system short domain 344 484 1.8E-16 T 11-10-2018 IPR005644 NolW-like XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.0E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:2.40.30.10 208 336 1.3E-52 T 11-10-2018 XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF50447 207 301 3.53E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF00009 Elongation factor Tu GTP binding domain 11 203 6.2E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 5.2E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:2.40.30.10 340 395 5.2E-28 T 11-10-2018 XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 8.4E-223 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 1.2E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF50465 304 396 1.58E-36 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.146 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:3.40.50.300 1 205 1.3E-68 T 11-10-2018 XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF52540 5 221 4.53E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11440 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.0E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:2.40.30.10 208 336 1.3E-52 T 11-10-2018 XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF50447 207 301 3.53E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF00009 Elongation factor Tu GTP binding domain 11 203 6.2E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 5.2E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:2.40.30.10 340 395 5.2E-28 T 11-10-2018 XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 8.4E-223 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 1.2E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF50465 304 396 1.58E-36 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.146 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 Gene3D G3DSA:3.40.50.300 1 205 1.3E-68 T 11-10-2018 XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 SUPERFAMILY SSF52540 5 221 4.53E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_11505 85b470620d53c501f2cfbff7df48ce70 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_07780 52b736885b62d61bf350b53f92a48b26 146 Pfam PF00581 Rhodanese-like domain 44 136 4.7E-17 T 11-10-2018 IPR001763 Rhodanese-like domain XFUD_07780 52b736885b62d61bf350b53f92a48b26 146 Gene3D G3DSA:3.40.250.10 40 145 2.9E-23 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFUD_07780 52b736885b62d61bf350b53f92a48b26 146 SUPERFAMILY SSF52821 22 144 6.55E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFUD_07780 52b736885b62d61bf350b53f92a48b26 146 SMART SM00450 42 140 2.8E-17 T 11-10-2018 IPR001763 Rhodanese-like domain XFUD_10475 94055b6d337ef3ad63048d845d3da2f5 315 PIRSF PIRSF004491 9 313 8.4E-90 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 XFUD_10475 94055b6d337ef3ad63048d845d3da2f5 315 SUPERFAMILY SSF82114 175 310 5.45E-42 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 XFUD_10475 94055b6d337ef3ad63048d845d3da2f5 315 Gene3D G3DSA:2.40.30.30 187 314 2.2E-38 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 XFUD_10475 94055b6d337ef3ad63048d845d3da2f5 315 SMART SM00904 184 307 1.7E-55 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 XFUD_10475 94055b6d337ef3ad63048d845d3da2f5 315 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 306 1.3E-77 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 XFUD_10475 94055b6d337ef3ad63048d845d3da2f5 315 Gene3D G3DSA:3.40.50.620 11 186 9.4E-53 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_10475 94055b6d337ef3ad63048d845d3da2f5 315 Pfam PF06574 FAD synthetase 15 167 6.0E-47 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 XFUD_10475 94055b6d337ef3ad63048d845d3da2f5 315 SUPERFAMILY SSF52374 19 176 4.22E-28 T 11-10-2018 XFUD_10475 94055b6d337ef3ad63048d845d3da2f5 315 Pfam PF01687 Riboflavin kinase 185 306 2.6E-34 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 XFUD_10700 bb7973881d5fdb433f8f9f1af1038e02 370 PIRSF PIRSF000443 1 370 4.6E-130 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 XFUD_10700 bb7973881d5fdb433f8f9f1af1038e02 370 Pfam PF00561 alpha/beta hydrolase fold 45 354 1.7E-27 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFUD_10700 bb7973881d5fdb433f8f9f1af1038e02 370 SUPERFAMILY SSF53474 14 369 2.06E-86 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_10700 bb7973881d5fdb433f8f9f1af1038e02 370 Gene3D G3DSA:1.10.1740.110 179 285 4.8E-124 T 11-10-2018 XFUD_10700 bb7973881d5fdb433f8f9f1af1038e02 370 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 16 367 7.1E-109 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 XFUD_10700 bb7973881d5fdb433f8f9f1af1038e02 370 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 11 368 28.908 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 XFUD_10700 bb7973881d5fdb433f8f9f1af1038e02 370 Gene3D G3DSA:3.40.50.1820 21 362 4.8E-124 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_07575 63deda732a3b6e7ee858eb44a26e7c7f 280 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 12 182 5.9E-6 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 XFUD_07575 63deda732a3b6e7ee858eb44a26e7c7f 280 Gene3D G3DSA:3.40.50.620 4 196 1.7E-23 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_07575 63deda732a3b6e7ee858eb44a26e7c7f 280 SUPERFAMILY SSF52402 9 189 8.37E-14 T 11-10-2018 XFUD_01700 d836050acbd8d9f36adc152b08297681 319 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 312 2.0E-118 T 11-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 XFUD_01700 d836050acbd8d9f36adc152b08297681 319 Pfam PF03741 Integral membrane protein TerC family 80 282 1.7E-54 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 XFUD_02785 4c1205beb09c864a5e9af35c252e38e2 896 PIRSF PIRSF000156 1 896 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 XFUD_02785 4c1205beb09c864a5e9af35c252e38e2 896 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 9 894 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 XFUD_02785 4c1205beb09c864a5e9af35c252e38e2 896 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 140 294 1.3E-6 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 XFUD_02785 4c1205beb09c864a5e9af35c252e38e2 896 Gene3D G3DSA:3.40.50.970 477 711 3.4E-101 T 11-10-2018 XFUD_02785 4c1205beb09c864a5e9af35c252e38e2 896 SUPERFAMILY SSF52518 480 706 9.18E-92 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFUD_02785 4c1205beb09c864a5e9af35c252e38e2 896 Gene3D G3DSA:3.40.50.970 59 476 1.3E-125 T 11-10-2018 XFUD_02785 4c1205beb09c864a5e9af35c252e38e2 896 SUPERFAMILY SSF52922 707 894 9.99E-58 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XFUD_02785 4c1205beb09c864a5e9af35c252e38e2 896 Gene3D G3DSA:3.40.50.920 712 895 1.6E-73 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 XFUD_02785 4c1205beb09c864a5e9af35c252e38e2 896 SUPERFAMILY SSF52518 60 472 4.29E-133 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFUD_03670 796a24685e68de9923bf9ef877a97547 551 SUPERFAMILY SSF47005 237 279 2.88E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XFUD_03670 796a24685e68de9923bf9ef877a97547 551 Gene3D G3DSA:3.30.559.10 302 551 7.2E-94 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 XFUD_03670 796a24685e68de9923bf9ef877a97547 551 Pfam PF02817 e3 binding domain 241 275 9.2E-15 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 XFUD_03670 796a24685e68de9923bf9ef877a97547 551 Gene3D G3DSA:2.40.50.100 113 189 1.2E-19 T 11-10-2018 XFUD_03670 796a24685e68de9923bf9ef877a97547 551 Gene3D G3DSA:2.40.50.100 4 82 2.2E-20 T 11-10-2018 XFUD_03670 796a24685e68de9923bf9ef877a97547 551 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 317 550 4.1E-80 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 XFUD_03670 796a24685e68de9923bf9ef877a97547 551 Gene3D G3DSA:4.10.320.10 241 283 1.2E-16 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 XFUD_03670 796a24685e68de9923bf9ef877a97547 551 SUPERFAMILY SSF51230 111 195 1.44E-20 T 11-10-2018 IPR011053 Single hybrid motif XFUD_03670 796a24685e68de9923bf9ef877a97547 551 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 135 164 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XFUD_03670 796a24685e68de9923bf9ef877a97547 551 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 89 551 1.7E-235 T 11-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 XFUD_03670 796a24685e68de9923bf9ef877a97547 551 Pfam PF00364 Biotin-requiring enzyme 9 77 6.9E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment XFUD_03670 796a24685e68de9923bf9ef877a97547 551 Pfam PF00364 Biotin-requiring enzyme 113 184 4.9E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment XFUD_03670 796a24685e68de9923bf9ef877a97547 551 SUPERFAMILY SSF51230 3 90 3.14E-22 T 11-10-2018 IPR011053 Single hybrid motif XFUD_03670 796a24685e68de9923bf9ef877a97547 551 SUPERFAMILY SSF52777 306 551 1.29E-81 T 11-10-2018 XFUD_03670 796a24685e68de9923bf9ef877a97547 551 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XFUD_03050 18feea8e16397c3ae4ae7d833deec493 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 3 93 2.1E-34 T 11-10-2018 IPR007711 Toxin HigB-1 XFUD_03050 18feea8e16397c3ae4ae7d833deec493 93 Gene3D G3DSA:3.30.2310.20 1 93 1.5E-35 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XFUD_03050 18feea8e16397c3ae4ae7d833deec493 93 SUPERFAMILY SSF143011 3 93 4.97E-14 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XFUD_00750 54c312042d1349efe8950513a71a08e5 214 Pfam PF03006 Haemolysin-III related 13 206 3.4E-37 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 XFUD_00750 54c312042d1349efe8950513a71a08e5 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 211 3.2E-61 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 XFUD_09025 2f51925845e012d2bca787e77f2852b0 219 SUPERFAMILY SSF50494 121 182 7.48E-6 T 11-10-2018 IPR009003 Peptidase S1, PA clan XFUD_09025 2f51925845e012d2bca787e77f2852b0 219 Gene3D G3DSA:2.40.10.10 121 219 1.4E-11 T 11-10-2018 XFUD_10440 f9b9663695d07337e1ecb41d9efb5419 777 SUPERFAMILY SSF52540 26 619 1.29E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_10440 f9b9663695d07337e1ecb41d9efb5419 777 Pfam PF13166 AAA domain 202 695 1.5E-33 T 11-10-2018 IPR026866 Protein CR006, P-loop domain XFUD_10440 f9b9663695d07337e1ecb41d9efb5419 777 Pfam PF13166 AAA domain 24 169 1.4E-11 T 11-10-2018 IPR026866 Protein CR006, P-loop domain XFUD_10440 f9b9663695d07337e1ecb41d9efb5419 777 Gene3D G3DSA:3.40.50.300 14 258 2.1E-5 T 11-10-2018 XFUD_10440 f9b9663695d07337e1ecb41d9efb5419 777 Gene3D G3DSA:3.40.50.300 356 628 1.4E-13 T 11-10-2018 XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 PIRSF PIRSF000114 1 335 3.6E-94 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 160 9.2E-49 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 Gene3D G3DSA:3.40.50.720 1 190 1.5E-52 T 11-10-2018 XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 Gene3D G3DSA:1.10.1040.10 192 340 1.7E-46 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 1.8E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 1.8E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 1.8E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 1.8E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 1.8E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 1.8E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 320 1.5E-46 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 SUPERFAMILY SSF48179 182 337 5.1E-51 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 325 38.364 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 SUPERFAMILY SSF51735 7 181 5.35E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_07790 b853a0efba2c461102804cbf4bcbb3f1 346 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 XFUD_01695 61b62e63647898c5e7f6ee5c8c4a6283 128 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 109 126 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 XFUD_01695 61b62e63647898c5e7f6ee5c8c4a6283 128 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 9 128 35.265 T 11-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 XFUD_01695 61b62e63647898c5e7f6ee5c8c4a6283 128 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 24 128 1.1E-37 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 XFUD_01695 61b62e63647898c5e7f6ee5c8c4a6283 128 Gene3D G3DSA:2.60.300.12 22 128 7.7E-35 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFUD_01695 61b62e63647898c5e7f6ee5c8c4a6283 128 SUPERFAMILY SSF89360 23 117 1.04E-29 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFUD_01695 61b62e63647898c5e7f6ee5c8c4a6283 128 Pfam PF01521 Iron-sulphur cluster biosynthesis 23 123 2.7E-19 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 SUPERFAMILY SSF47384 172 255 3.92E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 Gene3D G3DSA:1.10.287.130 169 252 4.0E-25 T 11-10-2018 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 SUPERFAMILY SSF47226 595 708 1.57E-13 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 Pfam PF00512 His Kinase A (phospho-acceptor) domain 189 254 8.7E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 SMART SM00448 457 572 3.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 Gene3D G3DSA:3.40.50.2300 443 578 2.1E-34 T 11-10-2018 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 Pfam PF00072 Response regulator receiver domain 459 571 5.2E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 SUPERFAMILY SSF55874 244 416 7.99E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 396 5.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 415 5.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 371 5.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 5.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 SMART SM00388 189 254 8.8E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 SMART SM00073 612 707 0.0019 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 Pfam PF01627 Hpt domain 625 698 4.2E-7 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 SUPERFAMILY SSF52172 455 577 1.35E-31 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 301 417 1.1E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 Gene3D G3DSA:1.20.120.160 590 709 1.5E-9 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 SMART SM00387 301 418 5.4E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_04715 56e01f30c3b80d384a836a37e64fc635 717 Gene3D G3DSA:3.30.565.10 253 421 5.9E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_10595 958b841c202e19bd1c7f9c614ed1155a 1053 Pfam PF00754 F5/8 type C domain 199 298 4.9E-15 T 11-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain XFUD_10595 958b841c202e19bd1c7f9c614ed1155a 1053 Gene3D G3DSA:1.50.10.10 618 930 4.0E-20 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 XFUD_10595 958b841c202e19bd1c7f9c614ed1155a 1053 SUPERFAMILY SSF48208 560 985 9.45E-43 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 XFUD_10595 958b841c202e19bd1c7f9c614ed1155a 1053 Gene3D G3DSA:2.60.120.430 16 176 2.9E-12 T 11-10-2018 XFUD_10595 958b841c202e19bd1c7f9c614ed1155a 1053 SUPERFAMILY SSF49785 160 303 5.56E-19 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFUD_10595 958b841c202e19bd1c7f9c614ed1155a 1053 SUPERFAMILY SSF49785 23 174 5.95E-20 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFUD_10595 958b841c202e19bd1c7f9c614ed1155a 1053 Pfam PF06202 Amylo-alpha-1,6-glucosidase 602 708 3.4E-5 T 11-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 XFUD_10595 958b841c202e19bd1c7f9c614ed1155a 1053 Gene3D G3DSA:2.60.120.260 180 305 1.7E-16 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFUD_04970 b1da1399302f9ec94ae3784ddc8ce0e7 118 PIRSF PIRSF002134 1 118 4.7E-40 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04970 b1da1399302f9ec94ae3784ddc8ce0e7 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 8.3E-49 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04970 b1da1399302f9ec94ae3784ddc8ce0e7 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04970 b1da1399302f9ec94ae3784ddc8ce0e7 118 Pfam PF00416 Ribosomal protein S13/S18 62 108 1.8E-17 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04970 b1da1399302f9ec94ae3784ddc8ce0e7 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.852 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04970 b1da1399302f9ec94ae3784ddc8ce0e7 118 Gene3D G3DSA:4.10.910.10 72 118 2.6E-25 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04970 b1da1399302f9ec94ae3784ddc8ce0e7 118 Gene3D G3DSA:1.10.8.50 1 71 4.8E-25 T 11-10-2018 XFUD_04970 b1da1399302f9ec94ae3784ddc8ce0e7 118 SUPERFAMILY SSF46946 2 114 7.06E-42 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 XFUD_04925 3247f3e10436b8b7a5b86ae239826e77 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.6E-57 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 XFUD_04925 3247f3e10436b8b7a5b86ae239826e77 122 SUPERFAMILY SSF50193 1 122 1.1E-51 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 XFUD_04925 3247f3e10436b8b7a5b86ae239826e77 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.541 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 XFUD_04925 3247f3e10436b8b7a5b86ae239826e77 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04925 3247f3e10436b8b7a5b86ae239826e77 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 5.1E-55 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 XFUD_04925 3247f3e10436b8b7a5b86ae239826e77 122 Gene3D G3DSA:2.40.150.20 1 122 1.1E-54 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 XFUD_04925 3247f3e10436b8b7a5b86ae239826e77 122 SMART SM01374 1 122 1.4E-84 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 XFUD_11480 bc50c9b59cb82b19d6afda45933b71c9 232 Pfam PF00687 Ribosomal protein L1p/L10e family 29 220 1.3E-42 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein XFUD_11480 bc50c9b59cb82b19d6afda45933b71c9 232 Gene3D G3DSA:3.30.190.20 20 225 2.9E-73 T 11-10-2018 XFUD_11480 bc50c9b59cb82b19d6afda45933b71c9 232 SUPERFAMILY SSF56808 6 226 2.35E-71 T 11-10-2018 IPR023674 Ribosomal protein L1-like XFUD_11480 bc50c9b59cb82b19d6afda45933b71c9 232 Gene3D G3DSA:3.40.50.790 67 159 2.9E-73 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich XFUD_11480 bc50c9b59cb82b19d6afda45933b71c9 232 PIRSF PIRSF002155 1 227 4.0E-66 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_11480 bc50c9b59cb82b19d6afda45933b71c9 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.9E-98 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 XFUD_11480 bc50c9b59cb82b19d6afda45933b71c9 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 229 39.698 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 XFUD_11480 bc50c9b59cb82b19d6afda45933b71c9 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_05960 4966b5fbe86b208a55f32bd6031ebb6f 100 Gene3D G3DSA:1.10.238.10 37 72 2.5E-5 T 11-10-2018 XFUD_05960 4966b5fbe86b208a55f32bd6031ebb6f 100 SUPERFAMILY SSF47473 41 80 4.56E-5 T 11-10-2018 IPR011992 EF-hand domain pair XFUD_00490 a315b949d4f8987fd95640186c326d18 342 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 217 256 1.1E-4 T 11-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 XFUD_00490 a315b949d4f8987fd95640186c326d18 342 SUPERFAMILY SSF51126 36 324 2.84E-27 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor XFUD_00490 a315b949d4f8987fd95640186c326d18 342 SMART SM00710 242 264 780.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat XFUD_00490 a315b949d4f8987fd95640186c326d18 342 SMART SM00710 196 218 50.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat XFUD_00490 a315b949d4f8987fd95640186c326d18 342 SMART SM00710 173 195 180.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat XFUD_00490 a315b949d4f8987fd95640186c326d18 342 SMART SM00710 219 241 710.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat XFUD_00490 a315b949d4f8987fd95640186c326d18 342 Gene3D G3DSA:2.160.20.10 37 328 3.4E-26 T 11-10-2018 IPR012334 Pectin lyase fold XFUD_00490 a315b949d4f8987fd95640186c326d18 342 Pfam PF13229 Right handed beta helix region 144 284 7.5E-17 T 11-10-2018 IPR039448 Right handed beta helix domain XFUD_00490 a315b949d4f8987fd95640186c326d18 342 SMART SM00722 121 293 1.7E-12 T 11-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain XFUD_00860 7e7a263587dd4c893ecae0acb37b547d 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 48.86 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_00860 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 3.0E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_00860 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 3.0E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_00860 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 3.0E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_00860 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 3.0E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_00860 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 3.0E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_00860 7e7a263587dd4c893ecae0acb37b547d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 3.0E-45 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_00860 7e7a263587dd4c893ecae0acb37b547d 319 Gene3D G3DSA:3.90.226.10 1 318 1.0E-112 T 11-10-2018 XFUD_00860 7e7a263587dd4c893ecae0acb37b547d 319 SUPERFAMILY SSF52096 5 316 5.17E-95 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFUD_00860 7e7a263587dd4c893ecae0acb37b547d 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 1.2E-60 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_00860 7e7a263587dd4c893ecae0acb37b547d 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 316 8.7E-148 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_10820 90124793756145b93ecd2705436f9b52 133 SMART SM00530 73 127 6.8E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_10820 90124793756145b93ecd2705436f9b52 133 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 48 3.5E-13 T 11-10-2018 IPR022453 Zinc finger, MqsA-type XFUD_10820 90124793756145b93ecd2705436f9b52 133 Gene3D G3DSA:1.20.58.720 1 63 9.1E-29 T 11-10-2018 XFUD_10820 90124793756145b93ecd2705436f9b52 133 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 1 131 2.3E-63 T 11-10-2018 IPR032758 Antitoxin MqsA/HigA-2 XFUD_10820 90124793756145b93ecd2705436f9b52 133 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 3 130 7.2E-44 T 11-10-2018 IPR022452 Antitoxin MqsA XFUD_10820 90124793756145b93ecd2705436f9b52 133 SUPERFAMILY SSF47413 69 127 2.12E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_10820 90124793756145b93ecd2705436f9b52 133 Gene3D G3DSA:1.10.260.40 64 131 2.2E-21 T 11-10-2018 XFUD_06560 885eeece8aaa8e053ca91169fde1c155 422 Pfam PF08007 Cupin superfamily protein 25 337 1.4E-103 T 11-10-2018 IPR003347 JmjC domain XFUD_06560 885eeece8aaa8e053ca91169fde1c155 422 SMART SM00558 111 249 4.8E-4 T 11-10-2018 IPR003347 JmjC domain XFUD_06560 885eeece8aaa8e053ca91169fde1c155 422 Gene3D G3DSA:2.60.120.650 11 229 1.5E-80 T 11-10-2018 XFUD_06560 885eeece8aaa8e053ca91169fde1c155 422 Gene3D G3DSA:1.10.10.2510 230 403 6.5E-33 T 11-10-2018 XFUD_06560 885eeece8aaa8e053ca91169fde1c155 422 SUPERFAMILY SSF51197 22 313 1.24E-63 T 11-10-2018 XFUD_10060 601e41b15b6b5c34ac69551c75b56ad1 166 Pfam PF00959 Phage lysozyme 30 137 1.7E-20 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XFUD_10060 601e41b15b6b5c34ac69551c75b56ad1 166 SUPERFAMILY SSF53955 5 148 1.07E-47 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_10060 601e41b15b6b5c34ac69551c75b56ad1 166 Gene3D G3DSA:1.10.530.40 3 154 9.7E-51 T 11-10-2018 XFUD_03870 3d58f82eb16b90a8859cff49dd55038a 161 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 152 7.3E-36 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 XFUD_03870 3d58f82eb16b90a8859cff49dd55038a 161 SUPERFAMILY SSF55486 23 157 3.66E-43 T 11-10-2018 XFUD_03870 3d58f82eb16b90a8859cff49dd55038a 161 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 7 155 23.316 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 XFUD_03870 3d58f82eb16b90a8859cff49dd55038a 161 Gene3D G3DSA:3.40.390.30 6 161 3.2E-48 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 XFUD_03870 3d58f82eb16b90a8859cff49dd55038a 161 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site XFUD_03870 3d58f82eb16b90a8859cff49dd55038a 161 Pfam PF02130 Uncharacterized protein family UPF0054 27 151 1.7E-34 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 XFUD_09625 731108650fc6c89c1007e4ff1254096f 218 Gene3D G3DSA:3.40.225.10 13 215 3.7E-44 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily XFUD_09625 731108650fc6c89c1007e4ff1254096f 218 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 217 102.763 T 11-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 XFUD_09625 731108650fc6c89c1007e4ff1254096f 218 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 208 2.6E-37 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal XFUD_09625 731108650fc6c89c1007e4ff1254096f 218 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 25 213 1.8E-69 T 11-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 XFUD_09625 731108650fc6c89c1007e4ff1254096f 218 SUPERFAMILY SSF53639 17 215 2.16E-42 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily XFUD_09625 731108650fc6c89c1007e4ff1254096f 218 SMART SM01007 21 209 8.9E-46 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal XFUD_01840 5841f0ee815190c7dde4a9a127f4a077 256 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XFUD_01840 5841f0ee815190c7dde4a9a127f4a077 256 Gene3D G3DSA:1.20.120.1760 9 198 3.7E-13 T 11-10-2018 XFUD_01840 5841f0ee815190c7dde4a9a127f4a077 256 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 79 5.2E-14 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 XFUD_01840 5841f0ee815190c7dde4a9a127f4a077 256 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 24 192 1.6E-31 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 XFUD_06815 c7fbe8aeeaebb816a8a4b881b4da8895 318 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 226 314 8.3E-26 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XFUD_06815 c7fbe8aeeaebb816a8a4b881b4da8895 318 SUPERFAMILY SSF54534 133 317 1.2E-49 T 11-10-2018 XFUD_06815 c7fbe8aeeaebb816a8a4b881b4da8895 318 Gene3D G3DSA:1.10.287.460 34 125 6.0E-11 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 XFUD_06815 c7fbe8aeeaebb816a8a4b881b4da8895 318 Gene3D G3DSA:1.10.287.460 126 206 8.6E-13 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 XFUD_06815 c7fbe8aeeaebb816a8a4b881b4da8895 318 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 126 218 1.2E-22 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 XFUD_06815 c7fbe8aeeaebb816a8a4b881b4da8895 318 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 34 112 1.6E-8 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 XFUD_06815 c7fbe8aeeaebb816a8a4b881b4da8895 318 Gene3D G3DSA:3.10.50.40 207 315 4.2E-39 T 11-10-2018 XFUD_05765 68b063acc8d074f56f836090bd77c68c 344 PIRSF PIRSF000148 9 344 9.9E-130 T 11-10-2018 XFUD_05765 68b063acc8d074f56f836090bd77c68c 344 SUPERFAMILY SSF51735 10 163 1.63E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_05765 68b063acc8d074f56f836090bd77c68c 344 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 11 340 2.7E-139 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XFUD_05765 68b063acc8d074f56f836090bd77c68c 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 326 2.3E-57 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 XFUD_05765 68b063acc8d074f56f836090bd77c68c 344 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 9 340 37.003 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XFUD_05765 68b063acc8d074f56f836090bd77c68c 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 11 125 1.4E-32 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XFUD_05765 68b063acc8d074f56f836090bd77c68c 344 Gene3D G3DSA:3.40.50.720 12 338 4.6E-146 T 11-10-2018 XFUD_05765 68b063acc8d074f56f836090bd77c68c 344 SUPERFAMILY SSF55347 135 327 2.38E-73 T 11-10-2018 XFUD_05765 68b063acc8d074f56f836090bd77c68c 344 Gene3D G3DSA:3.30.360.10 136 322 4.6E-146 T 11-10-2018 XFUD_05765 68b063acc8d074f56f836090bd77c68c 344 SMART SM00859 11 126 2.8E-45 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 635 8.1E-107 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 Pfam PF01578 Cytochrome C assembly protein 89 295 6.8E-48 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 637 8.6E-206 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 1.1E-86 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 356 373 1.8E-44 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.8E-44 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.8E-44 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 399 418 1.8E-44 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 628 641 1.8E-44 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10675 365e0205bd23862f6a9ebc4f4e7b380d 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 1.8E-44 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_05125 da32b772dfe00c1548ef25bd4d9f8b6b 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 4.2E-26 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_05125 da32b772dfe00c1548ef25bd4d9f8b6b 78 SUPERFAMILY SSF143800 2 77 6.87E-31 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_05125 da32b772dfe00c1548ef25bd4d9f8b6b 78 Pfam PF00830 Ribosomal L28 family 3 62 1.2E-26 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_05125 da32b772dfe00c1548ef25bd4d9f8b6b 78 Gene3D G3DSA:2.30.170.40 2 78 4.4E-34 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_05125 da32b772dfe00c1548ef25bd4d9f8b6b 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.386 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_08405 3cef6f7f19e7384c069ade1c6622d66c 216 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 47 201 4.8E-60 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XFUD_08405 3cef6f7f19e7384c069ade1c6622d66c 216 Gene3D G3DSA:3.30.1060.10 7 216 2.4E-81 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XFUD_08405 3cef6f7f19e7384c069ade1c6622d66c 216 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 45 207 36.658 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XFUD_08405 3cef6f7f19e7384c069ade1c6622d66c 216 Pfam PF01625 Peptide methionine sulfoxide reductase 48 201 1.2E-61 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XFUD_08405 3cef6f7f19e7384c069ade1c6622d66c 216 SUPERFAMILY SSF55068 13 212 6.28E-74 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 XFUD_10850 6771544a7679aee87930b316ef5e8576 626 Pfam PF05065 Phage capsid family 357 623 2.6E-50 T 11-10-2018 IPR024455 Phage capsid XFUD_10850 6771544a7679aee87930b316ef5e8576 626 Pfam PF04586 Caudovirus prohead serine protease 69 163 7.9E-6 T 11-10-2018 IPR006433 Prohead protease XFUD_10850 6771544a7679aee87930b316ef5e8576 626 SUPERFAMILY SSF56563 354 623 4.58E-42 T 11-10-2018 XFUD_10850 6771544a7679aee87930b316ef5e8576 626 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 335 622 1.6E-30 T 11-10-2018 IPR024455 Phage capsid XFUD_03015 6771544a7679aee87930b316ef5e8576 626 Pfam PF05065 Phage capsid family 357 623 2.6E-50 T 11-10-2018 IPR024455 Phage capsid XFUD_03015 6771544a7679aee87930b316ef5e8576 626 Pfam PF04586 Caudovirus prohead serine protease 69 163 7.9E-6 T 11-10-2018 IPR006433 Prohead protease XFUD_03015 6771544a7679aee87930b316ef5e8576 626 SUPERFAMILY SSF56563 354 623 4.58E-42 T 11-10-2018 XFUD_03015 6771544a7679aee87930b316ef5e8576 626 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 335 622 1.6E-30 T 11-10-2018 IPR024455 Phage capsid XFUD_06520 0eaa274e79915a4699f8d3a1cb9bb11e 229 SMART SM00100 17 136 3.1E-20 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain XFUD_06520 0eaa274e79915a4699f8d3a1cb9bb11e 229 Pfam PF00325 Bacterial regulatory proteins, crp family 185 216 8.3E-14 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XFUD_06520 0eaa274e79915a4699f8d3a1cb9bb11e 229 SMART SM00419 179 227 2.5E-12 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XFUD_06520 0eaa274e79915a4699f8d3a1cb9bb11e 229 ProSitePatterns PS00042 Crp-type HTH domain signature. 187 210 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 XFUD_06520 0eaa274e79915a4699f8d3a1cb9bb11e 229 Gene3D G3DSA:1.10.10.10 158 226 2.0E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_06520 0eaa274e79915a4699f8d3a1cb9bb11e 229 SUPERFAMILY SSF46785 158 226 1.12E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_06520 0eaa274e79915a4699f8d3a1cb9bb11e 229 Pfam PF00027 Cyclic nucleotide-binding domain 35 122 4.3E-18 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain XFUD_06520 0eaa274e79915a4699f8d3a1cb9bb11e 229 Gene3D G3DSA:2.60.120.10 24 157 8.6E-49 T 11-10-2018 IPR014710 RmlC-like jelly roll fold XFUD_06520 0eaa274e79915a4699f8d3a1cb9bb11e 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 201 216 2.5E-6 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XFUD_06520 0eaa274e79915a4699f8d3a1cb9bb11e 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 185 201 2.5E-6 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 XFUD_06520 0eaa274e79915a4699f8d3a1cb9bb11e 229 SUPERFAMILY SSF51206 23 154 3.27E-24 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 10 126 8.7E-35 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 Gene3D G3DSA:3.40.50.10860 13 283 9.6E-100 T 11-10-2018 XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 SUPERFAMILY SSF51735 128 287 2.36E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 267 275 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 Gene3D G3DSA:3.40.50.720 11 266 9.6E-100 T 11-10-2018 XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 129 288 3.5E-64 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 263 281 1.1E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 80 107 1.1E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 211 240 1.1E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 246 262 1.1E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 160 180 1.1E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 115 136 1.1E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 39 61 1.1E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 SUPERFAMILY SSF53223 8 127 1.63E-36 T 11-10-2018 XFUD_10530 8c1c8e99aa85e3d26d467c24b460b818 291 Hamap MF_01576 Bifunctional protein FolD [folD]. 8 290 36.736 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 140 160 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 Gene3D G3DSA:3.50.50.60 14 316 7.0E-121 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 203 219 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 45 60 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 148 172 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 242 263 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 133 145 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 12 34 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 111 119 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 3.4E-77 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 12 317 1.1E-118 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 301 3.0E-45 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 1.3E-39 T 11-10-2018 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 1.3E-39 T 11-10-2018 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.3E-39 T 11-10-2018 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 1.3E-39 T 11-10-2018 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 256 1.3E-39 T 11-10-2018 XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 SUPERFAMILY SSF51905 5 317 6.29E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_06095 5b393aeaf178653b3bd7c1d545c5990b 321 Gene3D G3DSA:3.50.50.60 122 248 7.0E-121 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_08340 793e41d64db04ad8ee90cf7e1a5c96d8 512 Gene3D G3DSA:3.90.700.10 237 344 1.3E-127 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_08340 793e41d64db04ad8ee90cf7e1a5c96d8 512 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 13 480 7.6E-137 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 XFUD_08340 793e41d64db04ad8ee90cf7e1a5c96d8 512 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 341 363 6.2E-6 T 11-10-2018 XFUD_08340 793e41d64db04ad8ee90cf7e1a5c96d8 512 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 6.2E-6 T 11-10-2018 XFUD_08340 793e41d64db04ad8ee90cf7e1a5c96d8 512 Pfam PF02910 Fumarate reductase flavoprotein C-term 455 493 3.2E-6 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_08340 793e41d64db04ad8ee90cf7e1a5c96d8 512 Gene3D G3DSA:3.50.50.60 13 390 1.3E-127 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_08340 793e41d64db04ad8ee90cf7e1a5c96d8 512 Gene3D G3DSA:1.20.58.100 405 497 2.9E-12 T 11-10-2018 XFUD_08340 793e41d64db04ad8ee90cf7e1a5c96d8 512 Pfam PF00890 FAD binding domain 13 378 1.7E-77 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_08340 793e41d64db04ad8ee90cf7e1a5c96d8 512 SUPERFAMILY SSF56425 227 338 4.19E-35 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_08340 793e41d64db04ad8ee90cf7e1a5c96d8 512 SUPERFAMILY SSF51905 13 405 3.62E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_08340 793e41d64db04ad8ee90cf7e1a5c96d8 512 SUPERFAMILY SSF46977 416 493 1.31E-13 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04230 79ca9740c8f7873b0aa87ebb5e3967c9 449 ProSitePatterns PS00483 Dihydroorotase signature 2. 313 324 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04230 79ca9740c8f7873b0aa87ebb5e3967c9 449 SUPERFAMILY SSF51556 55 377 1.54E-88 T 11-10-2018 IPR032466 Metal-dependent hydrolase XFUD_04230 79ca9740c8f7873b0aa87ebb5e3967c9 449 Gene3D G3DSA:2.30.40.10 6 431 3.4E-132 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XFUD_04230 79ca9740c8f7873b0aa87ebb5e3967c9 449 Pfam PF01979 Amidohydrolase family 52 429 2.9E-17 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 XFUD_04230 79ca9740c8f7873b0aa87ebb5e3967c9 449 SUPERFAMILY SSF51338 1 440 9.73E-29 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XFUD_04230 79ca9740c8f7873b0aa87ebb5e3967c9 449 Gene3D G3DSA:3.20.20.140 56 416 3.4E-132 T 11-10-2018 XFUD_07950 50aeba4e4f66e30e860b2e52adf2167f 401 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 318 6.8E-108 T 11-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFUD_07950 50aeba4e4f66e30e860b2e52adf2167f 401 Pfam PF07055 Enoyl reductase FAD binding domain 327 390 2.7E-29 T 11-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFUD_07950 50aeba4e4f66e30e860b2e52adf2167f 401 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 4.0E-34 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFUD_07950 50aeba4e4f66e30e860b2e52adf2167f 401 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 396 54.831 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFUD_07950 50aeba4e4f66e30e860b2e52adf2167f 401 Gene3D G3DSA:3.40.50.720 1 400 3.3E-171 T 11-10-2018 XFUD_01870 48499087651f33088bab12a373e851bb 128 SUPERFAMILY SSF52172 1 121 1.21E-37 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_01870 48499087651f33088bab12a373e851bb 128 Gene3D G3DSA:3.40.50.12740 1 128 1.2E-41 T 11-10-2018 XFUD_01870 48499087651f33088bab12a373e851bb 128 Pfam PF00072 Response regulator receiver domain 4 114 7.9E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_01870 48499087651f33088bab12a373e851bb 128 SMART SM00448 2 115 3.9E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_09015 4f83cb46929a84965af11157b9d6533d 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 42 7.4E-12 T 11-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 XFUD_09015 4f83cb46929a84965af11157b9d6533d 92 Gene3D G3DSA:1.10.1220.10 10 51 1.3E-7 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XFUD_09015 4f83cb46929a84965af11157b9d6533d 92 SUPERFAMILY SSF47598 4 44 6.89E-12 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XFUD_00240 1f536f1bfc0290e2783c0627b5462347 344 Pfam PF02195 ParB-like nuclease domain 29 122 4.7E-13 T 11-10-2018 IPR003115 ParB/Sulfiredoxin XFUD_00240 1f536f1bfc0290e2783c0627b5462347 344 Gene3D G3DSA:3.90.1530.30 42 108 4.3E-10 T 11-10-2018 XFUD_00240 1f536f1bfc0290e2783c0627b5462347 344 SMART SM00470 28 122 5.1E-19 T 11-10-2018 IPR003115 ParB/Sulfiredoxin XFUD_00240 1f536f1bfc0290e2783c0627b5462347 344 Gene3D G3DSA:1.10.10.730 116 169 1.7E-7 T 11-10-2018 XFUD_00240 1f536f1bfc0290e2783c0627b5462347 344 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 28 171 1.4E-27 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 XFUD_00240 1f536f1bfc0290e2783c0627b5462347 344 SUPERFAMILY SSF110849 31 167 4.53E-25 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily XFUD_00240 1f536f1bfc0290e2783c0627b5462347 344 Pfam PF08535 KorB domain 149 232 8.1E-5 T 11-10-2018 IPR013741 Repressor KorB domain XFUD_02750 fd62984ef24fa4b8a2d3e415a28da91c 88 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 15.424 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XFUD_02750 fd62984ef24fa4b8a2d3e415a28da91c 88 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 15 67 1.4E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XFUD_02750 fd62984ef24fa4b8a2d3e415a28da91c 88 Pfam PF02609 Exonuclease VII small subunit 15 65 1.6E-18 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XFUD_02750 fd62984ef24fa4b8a2d3e415a28da91c 88 Gene3D G3DSA:1.10.287.1040 10 85 1.0E-22 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 XFUD_02750 fd62984ef24fa4b8a2d3e415a28da91c 88 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 26 53 5.0E-10 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 XFUD_02750 fd62984ef24fa4b8a2d3e415a28da91c 88 SUPERFAMILY SSF116842 14 71 6.93E-18 T 11-10-2018 XFUD_12220 923ae1aa7ac8d401a93aeb206ecf1340 285 Gene3D G3DSA:2.40.128.260 93 220 6.2E-45 T 11-10-2018 XFUD_12220 923ae1aa7ac8d401a93aeb206ecf1340 285 Gene3D G3DSA:2.40.128.260 221 284 2.7E-9 T 11-10-2018 XFUD_12220 923ae1aa7ac8d401a93aeb206ecf1340 285 Pfam PF03743 Bacterial conjugation TrbI-like protein 100 275 1.3E-52 T 11-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI XFUD_10790 e86d781e59042606270393f54310e1d7 392 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 109 281 2.7E-35 T 11-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain XFUD_10790 e86d781e59042606270393f54310e1d7 392 Pfam PF17482 Phage tail sheath C-terminal domain 282 383 7.4E-20 T 11-10-2018 IPR020287 Tail sheath protein, C-terminal domain XFUD_03075 e86d781e59042606270393f54310e1d7 392 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 109 281 2.7E-35 T 11-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain XFUD_03075 e86d781e59042606270393f54310e1d7 392 Pfam PF17482 Phage tail sheath C-terminal domain 282 383 7.4E-20 T 11-10-2018 IPR020287 Tail sheath protein, C-terminal domain XFUD_03715 738eec48ab9acead192994f93cb12f69 675 Gene3D G3DSA:3.40.50.300 468 652 1.5E-31 T 11-10-2018 XFUD_03715 738eec48ab9acead192994f93cb12f69 675 SMART SM00491 492 620 1.3E-33 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 XFUD_03715 738eec48ab9acead192994f93cb12f69 675 Pfam PF13307 Helicase C-terminal domain 477 632 1.4E-30 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 XFUD_03715 738eec48ab9acead192994f93cb12f69 675 Gene3D G3DSA:3.40.50.300 26 291 1.3E-42 T 11-10-2018 XFUD_03715 738eec48ab9acead192994f93cb12f69 675 SUPERFAMILY SSF52540 20 616 1.16E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_04810 70a4cc995363d7f9704468ff1711518d 229 Pfam PF01965 DJ-1/PfpI family 26 222 1.4E-13 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 XFUD_04810 70a4cc995363d7f9704468ff1711518d 229 Gene3D G3DSA:3.40.50.880 5 226 7.4E-67 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_04810 70a4cc995363d7f9704468ff1711518d 229 SUPERFAMILY SSF52317 6 225 2.19E-66 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_07580 468a6cf0fbbbf9435602658726dbf3db 117 Pfam PF11284 Protein of unknown function (DUF3085) 22 111 6.9E-34 T 11-10-2018 IPR021436 Protein of unknown function DUF3085 XFUD_04910 3bf35135801b59290d58ce6a98b7840d 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.7E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04910 3bf35135801b59290d58ce6a98b7840d 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.7E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04910 3bf35135801b59290d58ce6a98b7840d 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.7E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04910 3bf35135801b59290d58ce6a98b7840d 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.7E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04910 3bf35135801b59290d58ce6a98b7840d 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 35.985 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04910 3bf35135801b59290d58ce6a98b7840d 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04910 3bf35135801b59290d58ce6a98b7840d 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.8E-47 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 XFUD_04910 3bf35135801b59290d58ce6a98b7840d 137 Gene3D G3DSA:3.90.1170.10 1 137 3.4E-55 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 XFUD_04910 3bf35135801b59290d58ce6a98b7840d 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 6.3E-55 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04910 3bf35135801b59290d58ce6a98b7840d 137 SUPERFAMILY SSF54686 1 134 3.92E-53 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 256 282 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 SUPERFAMILY SSF88946 22 129 2.22E-38 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 Gene3D G3DSA:1.10.10.10 212 286 2.1E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 21 286 1.9E-120 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 Pfam PF04545 Sigma-70, region 4 233 283 2.1E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 55 283 6.1E-31 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 SUPERFAMILY SSF88659 214 286 7.29E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 84 97 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 8 288 50.919 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 Gene3D G3DSA:1.10.601.10 16 132 1.2E-29 T 11-10-2018 XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 Pfam PF04542 Sigma-70 region 2 60 129 6.4E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 PRINTS PR00046 Major sigma-70 factor signature 256 271 1.6E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 PRINTS PR00046 Major sigma-70 factor signature 84 97 1.6E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 PRINTS PR00046 Major sigma-70 factor signature 271 282 1.6E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 PRINTS PR00046 Major sigma-70 factor signature 236 248 1.6E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFUD_11695 0158e41a9bf32fd12a186aae3e24f8b8 288 PIRSF PIRSF000770 18 288 1.3E-33 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 XFUD_05955 aadde9057381fcdf2d853bd4c17c53b7 425 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 423 8.2E-174 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_05955 aadde9057381fcdf2d853bd4c17c53b7 425 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 414 2.3E-108 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 XFUD_05955 aadde9057381fcdf2d853bd4c17c53b7 425 Gene3D G3DSA:3.65.10.10 6 421 6.0E-166 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XFUD_05955 aadde9057381fcdf2d853bd4c17c53b7 425 Gene3D G3DSA:3.65.10.10 21 236 6.0E-166 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 XFUD_05955 aadde9057381fcdf2d853bd4c17c53b7 425 SUPERFAMILY SSF55205 1 424 5.89E-139 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 XFUD_05955 aadde9057381fcdf2d853bd4c17c53b7 425 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 424 44.836 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_06840 1df1f0afffa577bf6fb1475778f05312 338 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 264 277 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XFUD_06840 1df1f0afffa577bf6fb1475778f05312 338 SUPERFAMILY SSF53613 12 334 1.42E-75 T 11-10-2018 IPR029056 Ribokinase-like XFUD_06840 1df1f0afffa577bf6fb1475778f05312 338 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 44 68 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XFUD_06840 1df1f0afffa577bf6fb1475778f05312 338 Pfam PF00294 pfkB family carbohydrate kinase 13 325 1.5E-58 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB XFUD_06840 1df1f0afffa577bf6fb1475778f05312 338 Gene3D G3DSA:3.40.1190.20 9 338 4.6E-135 T 11-10-2018 IPR029056 Ribokinase-like XFUD_09335 1b5da75030be4d86ad643790390fdb20 424 SUPERFAMILY SSF53474 89 384 1.92E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_09335 1b5da75030be4d86ad643790390fdb20 424 PIRSF PIRSF029171 6 424 4.8E-73 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XFUD_09335 1b5da75030be4d86ad643790390fdb20 424 Pfam PF03583 Secretory lipase 134 212 1.9E-6 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XFUD_09335 1b5da75030be4d86ad643790390fdb20 424 Gene3D G3DSA:3.40.50.1820 341 424 1.3E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_09335 1b5da75030be4d86ad643790390fdb20 424 Gene3D G3DSA:3.40.50.1820 35 259 1.3E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_09135 3b774bbb6e514035a963a96cb1db8abd 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 622 1.5E-265 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 XFUD_09135 3b774bbb6e514035a963a96cb1db8abd 629 Gene3D G3DSA:3.50.50.60 3 232 6.4E-84 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_09135 3b774bbb6e514035a963a96cb1db8abd 629 Gene3D G3DSA:3.50.50.60 309 459 4.8E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_09135 3b774bbb6e514035a963a96cb1db8abd 629 Gene3D G3DSA:1.10.10.1800 460 551 9.7E-26 T 11-10-2018 XFUD_09135 3b774bbb6e514035a963a96cb1db8abd 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 625 41.481 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 XFUD_09135 3b774bbb6e514035a963a96cb1db8abd 629 Gene3D G3DSA:1.10.150.570 570 622 1.9E-22 T 11-10-2018 XFUD_09135 3b774bbb6e514035a963a96cb1db8abd 629 SUPERFAMILY SSF51905 8 262 1.33E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_09135 3b774bbb6e514035a963a96cb1db8abd 629 Pfam PF01134 Glucose inhibited division protein A 9 398 6.6E-162 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 XFUD_09135 3b774bbb6e514035a963a96cb1db8abd 629 Pfam PF13932 GidA associated domain 403 617 8.4E-73 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 XFUD_09135 3b774bbb6e514035a963a96cb1db8abd 629 SMART SM01228 547 618 6.5E-40 T 11-10-2018 XFUD_09135 3b774bbb6e514035a963a96cb1db8abd 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 XFUD_09135 3b774bbb6e514035a963a96cb1db8abd 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 XFUD_06515 8ca0b6fe4d4903a69b5f6d197cf14991 264 Pfam PF02675 S-adenosylmethionine decarboxylase 43 170 8.4E-31 T 11-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XFUD_06515 8ca0b6fe4d4903a69b5f6d197cf14991 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 153.661 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XFUD_06515 8ca0b6fe4d4903a69b5f6d197cf14991 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 262 3.9E-142 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XFUD_06515 8ca0b6fe4d4903a69b5f6d197cf14991 264 Gene3D G3DSA:3.60.90.10 103 187 9.6E-7 T 11-10-2018 XFUD_06515 8ca0b6fe4d4903a69b5f6d197cf14991 264 Gene3D G3DSA:3.30.360.110 43 88 3.1E-5 T 11-10-2018 XFUD_06515 8ca0b6fe4d4903a69b5f6d197cf14991 264 SUPERFAMILY SSF56276 47 175 1.88E-24 T 11-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 XFUD_06515 8ca0b6fe4d4903a69b5f6d197cf14991 264 PIRSF PIRSF001356 2 264 2.0E-147 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 XFUD_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 23.098 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.0E-24 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 Pfam PF01165 Ribosomal protein S21 3 56 1.8E-22 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 1.0E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 Gene3D G3DSA:1.20.5.1150 16 54 2.7E-20 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 8.3E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 8.3E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 8.3E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_01805 6a8117129b61da3c0cebbb7d76adc1ae 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 8.3E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 Pfam PF00294 pfkB family carbohydrate kinase 1 310 9.2E-46 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB XFUD_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 Hamap MF_01987 Ribokinase [rbsK]. 2 317 20.513 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 XFUD_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 Gene3D G3DSA:3.40.1190.20 1 315 4.1E-73 T 11-10-2018 IPR029056 Ribokinase-like XFUD_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 PRINTS PR00990 Ribokinase signature 224 235 1.2E-18 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XFUD_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 PRINTS PR00990 Ribokinase signature 171 186 1.2E-18 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XFUD_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 PRINTS PR00990 Ribokinase signature 102 115 1.2E-18 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XFUD_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 PRINTS PR00990 Ribokinase signature 6 27 1.2E-18 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 XFUD_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 261 274 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 XFUD_01540 4197bb5b8fac595f9ae22e7c1b6aa0e4 317 SUPERFAMILY SSF53613 1 311 1.14E-56 T 11-10-2018 IPR029056 Ribokinase-like XFUD_04615 c758e083ca401dc3f1670c4d00f6f2c1 213 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 161 5.2E-18 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain XFUD_04615 c758e083ca401dc3f1670c4d00f6f2c1 213 PIRSF PIRSF009320 1 210 3.9E-32 T 11-10-2018 XFUD_04615 c758e083ca401dc3f1670c4d00f6f2c1 213 Gene3D G3DSA:3.40.50.300 4 213 1.3E-40 T 11-10-2018 XFUD_04615 c758e083ca401dc3f1670c4d00f6f2c1 213 SUPERFAMILY SSF52540 1 211 3.19E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01465 2c45731bb7c888812639ee402de026be 927 Gene3D G3DSA:2.170.130.10 39 179 1.5E-37 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFUD_01465 2c45731bb7c888812639ee402de026be 927 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 175 1.9E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFUD_01465 2c45731bb7c888812639ee402de026be 927 Pfam PF00593 TonB dependent receptor 390 924 6.8E-51 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFUD_01465 2c45731bb7c888812639ee402de026be 927 SUPERFAMILY SSF56935 44 926 2.97E-100 T 11-10-2018 XFUD_12140 849c3e577c7986e17e2dfb603af7ce16 121 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 42 56 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 XFUD_12140 849c3e577c7986e17e2dfb603af7ce16 121 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 2 99 4.2E-17 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XFUD_12140 849c3e577c7986e17e2dfb603af7ce16 121 Gene3D G3DSA:3.30.230.10 1 102 3.5E-22 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFUD_12140 849c3e577c7986e17e2dfb603af7ce16 121 SUPERFAMILY SSF54211 2 99 1.49E-20 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_12140 849c3e577c7986e17e2dfb603af7ce16 121 Pfam PF00825 Ribonuclease P 2 98 7.0E-21 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XFUD_12140 849c3e577c7986e17e2dfb603af7ce16 121 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 101 12.568 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XFUD_12140 849c3e577c7986e17e2dfb603af7ce16 121 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 9 98 5.0E-44 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 XFUD_00195 42d8c4ba5c0cccf01e8f6f6aa81f9257 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XFUD_00195 42d8c4ba5c0cccf01e8f6f6aa81f9257 148 Gene3D G3DSA:3.40.50.9100 1 147 6.1E-59 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XFUD_00195 42d8c4ba5c0cccf01e8f6f6aa81f9257 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 142 6.5E-53 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XFUD_00195 42d8c4ba5c0cccf01e8f6f6aa81f9257 148 SUPERFAMILY SSF52304 3 145 7.46E-57 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XFUD_00195 42d8c4ba5c0cccf01e8f6f6aa81f9257 148 Pfam PF01220 Dehydroquinase class II 4 140 1.5E-54 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XFUD_00195 42d8c4ba5c0cccf01e8f6f6aa81f9257 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 142 7.0E-54 T 11-10-2018 XFUD_00195 42d8c4ba5c0cccf01e8f6f6aa81f9257 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 67.809 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XFUD_00195 42d8c4ba5c0cccf01e8f6f6aa81f9257 148 PIRSF PIRSF001399 1 146 6.8E-53 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 XFUD_11390 f933b35cc707c646ad9df731d6fadaf1 257 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 256 31.839 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 XFUD_11390 f933b35cc707c646ad9df731d6fadaf1 257 Gene3D G3DSA:3.30.70.100 1 95 2.0E-28 T 11-10-2018 XFUD_11390 f933b35cc707c646ad9df731d6fadaf1 257 SUPERFAMILY SSF52821 102 234 3.02E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFUD_11390 f933b35cc707c646ad9df731d6fadaf1 257 Gene3D G3DSA:3.40.250.10 100 251 2.5E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFUD_11390 f933b35cc707c646ad9df731d6fadaf1 257 SMART SM00450 118 219 6.6E-9 T 11-10-2018 IPR001763 Rhodanese-like domain XFUD_11405 c5b39f7b19e5d88030af6c8f4bd26c07 146 SUPERFAMILY SSF53933 58 141 5.1E-32 T 11-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 XFUD_11405 c5b39f7b19e5d88030af6c8f4bd26c07 146 Pfam PF00545 ribonuclease 59 139 1.7E-26 T 11-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 XFUD_11405 c5b39f7b19e5d88030af6c8f4bd26c07 146 Gene3D G3DSA:3.10.450.30 51 145 4.9E-33 T 11-10-2018 XFUD_01815 fda97c3b124c05a17b845ebf656d9631 120 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 9.4E-23 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XFUD_01815 fda97c3b124c05a17b845ebf656d9631 120 Gene3D G3DSA:3.30.1130.10 1 117 5.7E-38 T 11-10-2018 XFUD_01815 fda97c3b124c05a17b845ebf656d9631 120 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 4.9E-31 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XFUD_01815 fda97c3b124c05a17b845ebf656d9631 120 SMART SM00905 4 114 9.8E-44 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XFUD_01815 fda97c3b124c05a17b845ebf656d9631 120 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.3E-27 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 XFUD_01815 fda97c3b124c05a17b845ebf656d9631 120 SUPERFAMILY SSF55620 1 116 1.78E-34 T 11-10-2018 XFUD_11380 0116a24ca284c5b8283f6620ee51065b 1132 Gene3D G3DSA:2.40.50.140 31 124 1.5E-31 T 11-10-2018 XFUD_11380 0116a24ca284c5b8283f6620ee51065b 1132 Pfam PF10150 Ribonuclease E/G family 120 389 3.3E-96 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 XFUD_11380 0116a24ca284c5b8283f6620ee51065b 1132 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 1.7E-163 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 XFUD_11380 0116a24ca284c5b8283f6620ee51065b 1132 Pfam PF00575 S1 RNA binding domain 36 117 1.8E-11 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFUD_11380 0116a24ca284c5b8283f6620ee51065b 1132 SUPERFAMILY SSF50249 40 124 3.77E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_11380 0116a24ca284c5b8283f6620ee51065b 1132 Gene3D G3DSA:3.40.1260.20 399 507 3.6E-35 T 11-10-2018 XFUD_11380 0116a24ca284c5b8283f6620ee51065b 1132 Hamap MF_00970 Ribonuclease E [rne]. 1 1054 31.841 T 11-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 XFUD_11380 0116a24ca284c5b8283f6620ee51065b 1132 SMART SM00316 37 118 8.2E-9 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFUD_00075 e7aabb2a249361700b9250368f56490e 305 PIRSF PIRSF000166 2 299 3.6E-119 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFUD_00075 e7aabb2a249361700b9250368f56490e 305 SUPERFAMILY SSF102886 5 297 2.22E-127 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFUD_00075 e7aabb2a249361700b9250368f56490e 305 PRINTS PR00073 Coprogen oxidase signature 160 189 1.6E-81 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFUD_00075 e7aabb2a249361700b9250368f56490e 305 PRINTS PR00073 Coprogen oxidase signature 231 258 1.6E-81 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFUD_00075 e7aabb2a249361700b9250368f56490e 305 PRINTS PR00073 Coprogen oxidase signature 259 285 1.6E-81 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFUD_00075 e7aabb2a249361700b9250368f56490e 305 PRINTS PR00073 Coprogen oxidase signature 88 112 1.6E-81 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFUD_00075 e7aabb2a249361700b9250368f56490e 305 PRINTS PR00073 Coprogen oxidase signature 46 67 1.6E-81 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFUD_00075 e7aabb2a249361700b9250368f56490e 305 PRINTS PR00073 Coprogen oxidase signature 29 45 1.6E-81 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFUD_00075 e7aabb2a249361700b9250368f56490e 305 PRINTS PR00073 Coprogen oxidase signature 123 145 1.6E-81 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFUD_00075 e7aabb2a249361700b9250368f56490e 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 274 58.192 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFUD_00075 e7aabb2a249361700b9250368f56490e 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFUD_00075 e7aabb2a249361700b9250368f56490e 305 Gene3D G3DSA:3.40.1500.10 1 298 6.1E-126 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFUD_00075 e7aabb2a249361700b9250368f56490e 305 Pfam PF01218 Coproporphyrinogen III oxidase 6 298 1.0E-125 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 XFUD_05365 742baa8e90e6c3a617a5dda80fbbfef0 373 PIRSF PIRSF005963 1 352 2.3E-141 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XFUD_05365 742baa8e90e6c3a617a5dda80fbbfef0 373 TIGRFAM TIGR00510 lipA: lipoyl synthase 48 330 9.9E-133 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XFUD_05365 742baa8e90e6c3a617a5dda80fbbfef0 373 SUPERFAMILY SSF102114 68 332 1.96E-67 T 11-10-2018 XFUD_05365 742baa8e90e6c3a617a5dda80fbbfef0 373 Gene3D G3DSA:3.20.20.70 94 307 1.3E-23 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_05365 742baa8e90e6c3a617a5dda80fbbfef0 373 SMART SM00729 97 305 6.8E-17 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XFUD_05365 742baa8e90e6c3a617a5dda80fbbfef0 373 Hamap MF_00206 Lipoyl synthase [lipA]. 50 339 149.811 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XFUD_05365 742baa8e90e6c3a617a5dda80fbbfef0 373 Pfam PF04055 Radical SAM superfamily 103 267 5.0E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XFUD_05365 742baa8e90e6c3a617a5dda80fbbfef0 373 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 49 86 2.6E-8 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 XFUD_11790 21ae2aaa18b478c4c14376b1fee9d37e 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 8.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XFUD_11790 21ae2aaa18b478c4c14376b1fee9d37e 189 SUPERFAMILY SSF46689 3 76 3.29E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFUD_11790 21ae2aaa18b478c4c14376b1fee9d37e 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.9E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XFUD_11790 21ae2aaa18b478c4c14376b1fee9d37e 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.9E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XFUD_11790 21ae2aaa18b478c4c14376b1fee9d37e 189 Gene3D G3DSA:1.10.357.10 1 189 9.2E-53 T 11-10-2018 XFUD_00565 733f56aa2196a69d11361e990add5b5a 491 SUPERFAMILY SSF52949 3 181 1.12E-41 T 11-10-2018 XFUD_00565 733f56aa2196a69d11361e990add5b5a 491 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 344 351 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XFUD_00565 733f56aa2196a69d11361e990add5b5a 491 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 5 490 34.959 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 XFUD_00565 733f56aa2196a69d11361e990add5b5a 491 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 21 144 2.3E-31 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XFUD_00565 733f56aa2196a69d11361e990add5b5a 491 SUPERFAMILY SSF53187 176 489 6.59E-120 T 11-10-2018 XFUD_00565 733f56aa2196a69d11361e990add5b5a 491 Gene3D G3DSA:3.40.630.10 176 491 2.7E-139 T 11-10-2018 XFUD_00565 733f56aa2196a69d11361e990add5b5a 491 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 183 483 1.1E-118 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XFUD_00565 733f56aa2196a69d11361e990add5b5a 491 Gene3D G3DSA:3.40.220.10 3 162 1.6E-44 T 11-10-2018 XFUD_00565 733f56aa2196a69d11361e990add5b5a 491 PRINTS PR00481 Cytosol aminopeptidase signature 259 276 3.0E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFUD_00565 733f56aa2196a69d11361e990add5b5a 491 PRINTS PR00481 Cytosol aminopeptidase signature 368 383 3.0E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFUD_00565 733f56aa2196a69d11361e990add5b5a 491 PRINTS PR00481 Cytosol aminopeptidase signature 318 339 3.0E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFUD_00565 733f56aa2196a69d11361e990add5b5a 491 PRINTS PR00481 Cytosol aminopeptidase signature 340 360 3.0E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFUD_00565 733f56aa2196a69d11361e990add5b5a 491 PRINTS PR00481 Cytosol aminopeptidase signature 281 302 3.0E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFUD_10150 fc623a395a9d5ed77e6f49726efafe7a 237 SUPERFAMILY SSF52172 9 134 4.41E-40 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_10150 fc623a395a9d5ed77e6f49726efafe7a 237 Gene3D G3DSA:3.40.50.2300 2 130 2.8E-37 T 11-10-2018 XFUD_10150 fc623a395a9d5ed77e6f49726efafe7a 237 Pfam PF00072 Response regulator receiver domain 11 121 8.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_10150 fc623a395a9d5ed77e6f49726efafe7a 237 SMART SM00862 155 229 2.3E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFUD_10150 fc623a395a9d5ed77e6f49726efafe7a 237 Gene3D G3DSA:1.10.10.10 134 234 1.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_10150 fc623a395a9d5ed77e6f49726efafe7a 237 SUPERFAMILY SSF46894 130 230 3.12E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 XFUD_10150 fc623a395a9d5ed77e6f49726efafe7a 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 1.2E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFUD_10150 fc623a395a9d5ed77e6f49726efafe7a 237 SMART SM00448 9 121 3.2E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_05660 f4dd08db6d62d255a69c54bda5e28dc7 367 Pfam PF13531 Bacterial extracellular solute-binding protein 74 316 5.3E-41 T 11-10-2018 XFUD_05660 f4dd08db6d62d255a69c54bda5e28dc7 367 Gene3D G3DSA:3.40.190.10 62 332 2.0E-128 T 11-10-2018 XFUD_05660 f4dd08db6d62d255a69c54bda5e28dc7 367 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 53 363 7.3E-142 T 11-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 XFUD_05660 f4dd08db6d62d255a69c54bda5e28dc7 367 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 181 189 - T 11-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 XFUD_05660 f4dd08db6d62d255a69c54bda5e28dc7 367 Gene3D G3DSA:3.40.190.10 150 362 2.0E-128 T 11-10-2018 XFUD_05660 f4dd08db6d62d255a69c54bda5e28dc7 367 SUPERFAMILY SSF53850 56 363 1.7E-84 T 11-10-2018 XFUD_07480 3b63900a2dc3b635a62119e77e53589b 247 SUPERFAMILY SSF51735 3 232 1.0E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_07480 3b63900a2dc3b635a62119e77e53589b 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XFUD_07480 3b63900a2dc3b635a62119e77e53589b 247 Gene3D G3DSA:3.40.50.720 1 242 5.0E-67 T 11-10-2018 XFUD_07480 3b63900a2dc3b635a62119e77e53589b 247 Pfam PF00106 short chain dehydrogenase 5 199 9.1E-55 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07480 3b63900a2dc3b635a62119e77e53589b 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 181 0.0028 T 11-10-2018 XFUD_07480 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07480 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07480 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07480 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_07480 3b63900a2dc3b635a62119e77e53589b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_11475 f42344b237f521f1564c6e6094928a46 175 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 11-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_11475 f42344b237f521f1564c6e6094928a46 175 Pfam PF00466 Ribosomal protein L10 7 101 7.8E-24 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 XFUD_11475 f42344b237f521f1564c6e6094928a46 175 SUPERFAMILY SSF160369 7 160 5.89E-41 T 11-10-2018 XFUD_11475 f42344b237f521f1564c6e6094928a46 175 Gene3D G3DSA:3.30.70.1730 6 168 4.4E-29 T 11-10-2018 XFUD_11475 f42344b237f521f1564c6e6094928a46 175 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 25.025 T 11-10-2018 IPR022973 Ribosomal protein L10 XFUD_05675 9ebb2127152b3d5c7e29aa7ef447026a 348 SMART SM00382 27 214 7.2E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_05675 9ebb2127152b3d5c7e29aa7ef447026a 348 SUPERFAMILY SSF52540 3 243 7.72E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05675 9ebb2127152b3d5c7e29aa7ef447026a 348 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 2.4E-111 T 11-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 XFUD_05675 9ebb2127152b3d5c7e29aa7ef447026a 348 Gene3D G3DSA:3.40.50.300 3 248 2.0E-77 T 11-10-2018 XFUD_05675 9ebb2127152b3d5c7e29aa7ef447026a 348 Pfam PF12857 TOBE-like domain 284 337 2.2E-6 T 11-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 XFUD_05675 9ebb2127152b3d5c7e29aa7ef447026a 348 SUPERFAMILY SSF50331 240 340 1.36E-7 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal XFUD_05675 9ebb2127152b3d5c7e29aa7ef447026a 348 Pfam PF00005 ABC transporter 19 164 7.3E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_05675 9ebb2127152b3d5c7e29aa7ef447026a 348 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_04940 25698774577e94c8918d1aa7d9cb6714 132 SUPERFAMILY SSF56047 2 131 2.35E-40 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04940 25698774577e94c8918d1aa7d9cb6714 132 Gene3D G3DSA:3.30.1490.10 76 131 8.5E-21 T 11-10-2018 XFUD_04940 25698774577e94c8918d1aa7d9cb6714 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04940 25698774577e94c8918d1aa7d9cb6714 132 Pfam PF00410 Ribosomal protein S8 5 131 6.0E-42 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04940 25698774577e94c8918d1aa7d9cb6714 132 Gene3D G3DSA:3.30.1370.30 2 74 9.3E-23 T 11-10-2018 XFUD_04940 25698774577e94c8918d1aa7d9cb6714 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 28.273 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_06100 38008665ad69d0bbcf73579af7cf9e3f 784 Gene3D G3DSA:3.40.50.300 391 693 2.4E-114 T 11-10-2018 XFUD_06100 38008665ad69d0bbcf73579af7cf9e3f 784 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 33 204 7.1E-41 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region XFUD_06100 38008665ad69d0bbcf73579af7cf9e3f 784 Gene3D G3DSA:1.10.10.10 722 784 1.2E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_06100 38008665ad69d0bbcf73579af7cf9e3f 784 SMART SM00382 429 628 0.0016 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_06100 38008665ad69d0bbcf73579af7cf9e3f 784 SUPERFAMILY SSF52540 366 679 2.32E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_06100 38008665ad69d0bbcf73579af7cf9e3f 784 Pfam PF09397 Ftsk gamma domain 720 780 2.9E-27 T 11-10-2018 IPR018541 FtsK gamma domain XFUD_06100 38008665ad69d0bbcf73579af7cf9e3f 784 Pfam PF01580 FtsK/SpoIIIE family 394 607 8.7E-63 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 XFUD_06100 38008665ad69d0bbcf73579af7cf9e3f 784 Gene3D G3DSA:3.30.980.40 286 390 1.6E-32 T 11-10-2018 XFUD_06100 38008665ad69d0bbcf73579af7cf9e3f 784 SUPERFAMILY SSF46785 718 782 3.33E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_06100 38008665ad69d0bbcf73579af7cf9e3f 784 SMART SM00843 718 783 3.3E-40 T 11-10-2018 IPR018541 FtsK gamma domain XFUD_02285 cabf5fa8448052e1e1f6fffb7ce1d78b 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 3.1E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_02285 cabf5fa8448052e1e1f6fffb7ce1d78b 187 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 26 7.2E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_02285 cabf5fa8448052e1e1f6fffb7ce1d78b 187 Pfam PF00114 Pilin (bacterial filament) 36 171 1.2E-25 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XFUD_02285 cabf5fa8448052e1e1f6fffb7ce1d78b 187 SUPERFAMILY SSF54523 8 171 4.39E-18 T 11-10-2018 XFUD_00695 0e9ed280d50a302395f8da83947d6678 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_00695 0e9ed280d50a302395f8da83947d6678 418 Pfam PF01479 S4 domain 339 377 8.4E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_00695 0e9ed280d50a302395f8da83947d6678 418 SUPERFAMILY SSF55174 333 400 1.09E-14 T 11-10-2018 XFUD_00695 0e9ed280d50a302395f8da83947d6678 418 Gene3D G3DSA:1.10.240.10 218 329 4.7E-24 T 11-10-2018 XFUD_00695 0e9ed280d50a302395f8da83947d6678 418 Gene3D G3DSA:3.40.50.620 5 217 3.5E-73 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_00695 0e9ed280d50a302395f8da83947d6678 418 Pfam PF00579 tRNA synthetases class I (W and Y) 31 315 3.2E-69 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_00695 0e9ed280d50a302395f8da83947d6678 418 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 400 44.783 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 XFUD_00695 0e9ed280d50a302395f8da83947d6678 418 SUPERFAMILY SSF52374 8 316 8.67E-88 T 11-10-2018 XFUD_00695 0e9ed280d50a302395f8da83947d6678 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 9 399 7.0E-109 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XFUD_00695 0e9ed280d50a302395f8da83947d6678 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 6.0E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XFUD_00695 0e9ed280d50a302395f8da83947d6678 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 6.0E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XFUD_00695 0e9ed280d50a302395f8da83947d6678 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 6.0E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XFUD_00695 0e9ed280d50a302395f8da83947d6678 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 6.0E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 XFUD_00695 0e9ed280d50a302395f8da83947d6678 418 Gene3D G3DSA:3.10.290.10 330 400 6.5E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XFUD_01325 23948b480400f0b034d4274c5da5d9bc 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 63 172 5.9E-23 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01325 23948b480400f0b034d4274c5da5d9bc 184 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 41.238 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01325 23948b480400f0b034d4274c5da5d9bc 184 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01325 23948b480400f0b034d4274c5da5d9bc 184 Gene3D G3DSA:3.40.50.12280 22 184 1.4E-78 T 11-10-2018 XFUD_01325 23948b480400f0b034d4274c5da5d9bc 184 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 38 177 3.2E-76 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01325 23948b480400f0b034d4274c5da5d9bc 184 SUPERFAMILY SSF56770 35 179 3.14E-66 T 11-10-2018 XFUD_04350 e45313f142ec6d72c2477384c8ca450e 452 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 39 411 3.3E-113 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFUD_04350 e45313f142ec6d72c2477384c8ca450e 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 223 246 2.6E-58 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFUD_04350 e45313f142ec6d72c2477384c8ca450e 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 355 372 2.6E-58 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFUD_04350 e45313f142ec6d72c2477384c8ca450e 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 387 406 2.6E-58 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFUD_04350 e45313f142ec6d72c2477384c8ca450e 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 171 192 2.6E-58 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFUD_04350 e45313f142ec6d72c2477384c8ca450e 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 327 346 2.6E-58 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFUD_04350 e45313f142ec6d72c2477384c8ca450e 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 118 144 2.6E-58 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFUD_04350 e45313f142ec6d72c2477384c8ca450e 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 146 165 2.6E-58 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFUD_04350 e45313f142ec6d72c2477384c8ca450e 452 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 24 443 38.148 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFUD_04350 e45313f142ec6d72c2477384c8ca450e 452 Pfam PF01566 Natural resistance-associated macrophage protein 59 415 3.2E-127 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 XFUD_01490 ae0a896c12e7f639b485862fe7e2958f 461 SUPERFAMILY SSF56176 7 219 9.81E-71 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XFUD_01490 ae0a896c12e7f639b485862fe7e2958f 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 457 5.6E-70 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 XFUD_01490 ae0a896c12e7f639b485862fe7e2958f 461 Pfam PF01565 FAD binding domain 44 182 7.0E-42 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 XFUD_01490 ae0a896c12e7f639b485862fe7e2958f 461 Gene3D G3DSA:3.30.465.40 8 237 2.1E-72 T 11-10-2018 XFUD_01490 ae0a896c12e7f639b485862fe7e2958f 461 Gene3D G3DSA:1.10.45.10 418 458 4.8E-16 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 XFUD_01490 ae0a896c12e7f639b485862fe7e2958f 461 Gene3D G3DSA:3.30.70.2740 336 417 2.5E-17 T 11-10-2018 XFUD_01490 ae0a896c12e7f639b485862fe7e2958f 461 SUPERFAMILY SSF55103 192 459 3.6E-61 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 XFUD_03330 18fd733dbcee7a9a69a955f40f85ffce 66 Pfam PF02597 ThiS family 3 66 5.4E-16 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 XFUD_03330 18fd733dbcee7a9a69a955f40f85ffce 66 SUPERFAMILY SSF54285 1 66 1.44E-17 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp XFUD_03330 18fd733dbcee7a9a69a955f40f85ffce 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 3.0E-20 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis XFUD_03330 18fd733dbcee7a9a69a955f40f85ffce 66 Gene3D G3DSA:3.10.20.30 1 66 2.2E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily XFUD_06940 afa5eae73f17ee561e9721cb95ef7017 259 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 35 193 1.4E-24 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal XFUD_06940 afa5eae73f17ee561e9721cb95ef7017 259 Gene3D G3DSA:3.40.47.10 7 208 1.2E-6 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_06940 afa5eae73f17ee561e9721cb95ef7017 259 SUPERFAMILY SSF53901 33 190 5.4E-13 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_04270 f062d31aacaaa197902e69b9cbc3c50f 336 Gene3D G3DSA:3.40.50.1370 168 331 1.2E-113 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XFUD_04270 f062d31aacaaa197902e69b9cbc3c50f 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 287 296 9.1E-11 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFUD_04270 f062d31aacaaa197902e69b9cbc3c50f 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 9.1E-11 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFUD_04270 f062d31aacaaa197902e69b9cbc3c50f 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 9.1E-11 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFUD_04270 f062d31aacaaa197902e69b9cbc3c50f 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 170 332 4.2E-32 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 XFUD_04270 f062d31aacaaa197902e69b9cbc3c50f 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 161 7.9E-34 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 XFUD_04270 f062d31aacaaa197902e69b9cbc3c50f 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 315 329 3.0E-9 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_04270 f062d31aacaaa197902e69b9cbc3c50f 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 35 57 3.0E-9 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_04270 f062d31aacaaa197902e69b9cbc3c50f 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 147 164 3.0E-9 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_04270 f062d31aacaaa197902e69b9cbc3c50f 336 SUPERFAMILY SSF53671 2 334 1.28E-70 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XFUD_04270 f062d31aacaaa197902e69b9cbc3c50f 336 Gene3D G3DSA:3.40.50.1370 5 167 1.2E-113 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XFUD_05010 f24d6a3c56fe80fbb36e00324ce9d6d0 350 Hamap MF_00790 Lipase chaperone [lifO]. 17 350 22.506 T 11-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 XFUD_05010 f24d6a3c56fe80fbb36e00324ce9d6d0 350 SUPERFAMILY SSF158855 76 349 1.83E-74 T 11-10-2018 XFUD_05010 f24d6a3c56fe80fbb36e00324ce9d6d0 350 Pfam PF03280 Proteobacterial lipase chaperone protein 149 340 1.3E-48 T 11-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 XFUD_03460 c1618137f8cffa6a7514a9c5ee30c7a8 960 Gene3D G3DSA:3.30.830.10 741 936 1.2E-38 T 11-10-2018 XFUD_03460 c1618137f8cffa6a7514a9c5ee30c7a8 960 Pfam PF05193 Peptidase M16 inactive domain 684 864 3.9E-29 T 11-10-2018 IPR007863 Peptidase M16, C-terminal XFUD_03460 c1618137f8cffa6a7514a9c5ee30c7a8 960 Pfam PF05193 Peptidase M16 inactive domain 216 391 1.9E-30 T 11-10-2018 IPR007863 Peptidase M16, C-terminal XFUD_03460 c1618137f8cffa6a7514a9c5ee30c7a8 960 Gene3D G3DSA:3.30.830.10 519 731 3.9E-41 T 11-10-2018 XFUD_03460 c1618137f8cffa6a7514a9c5ee30c7a8 960 SUPERFAMILY SSF63411 745 951 2.67E-33 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XFUD_03460 c1618137f8cffa6a7514a9c5ee30c7a8 960 SUPERFAMILY SSF63411 513 731 1.31E-40 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XFUD_03460 c1618137f8cffa6a7514a9c5ee30c7a8 960 Pfam PF00675 Insulinase (Peptidase family M16) 529 649 8.1E-8 T 11-10-2018 IPR011765 Peptidase M16, N-terminal XFUD_03460 c1618137f8cffa6a7514a9c5ee30c7a8 960 Pfam PF00675 Insulinase (Peptidase family M16) 59 196 5.7E-15 T 11-10-2018 IPR011765 Peptidase M16, N-terminal XFUD_03460 c1618137f8cffa6a7514a9c5ee30c7a8 960 Gene3D G3DSA:3.30.830.10 45 267 2.2E-65 T 11-10-2018 XFUD_03460 c1618137f8cffa6a7514a9c5ee30c7a8 960 SUPERFAMILY SSF63411 44 254 3.12E-53 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XFUD_03460 c1618137f8cffa6a7514a9c5ee30c7a8 960 SUPERFAMILY SSF63411 274 457 2.83E-31 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 XFUD_03460 c1618137f8cffa6a7514a9c5ee30c7a8 960 Gene3D G3DSA:3.30.830.10 271 468 8.2E-37 T 11-10-2018 XFUD_11210 364d3806d82bfae496fc3dffaf78113d 246 SUPERFAMILY SSF52540 47 242 7.66E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11210 364d3806d82bfae496fc3dffaf78113d 246 Pfam PF00005 ABC transporter 49 181 4.1E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_11210 364d3806d82bfae496fc3dffaf78113d 246 Gene3D G3DSA:3.40.50.300 4 245 5.5E-37 T 11-10-2018 XFUD_11210 364d3806d82bfae496fc3dffaf78113d 246 SMART SM00382 58 229 0.001 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_01020 314afec4fef1203c3896ccab446db125 300 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 243 298 4.7E-12 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_01020 314afec4fef1203c3896ccab446db125 300 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 1.7E-65 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_01020 314afec4fef1203c3896ccab446db125 300 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 235 8.2E-16 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 XFUD_01020 314afec4fef1203c3896ccab446db125 300 Gene3D G3DSA:3.30.2350.10 2 237 5.3E-79 T 11-10-2018 XFUD_01020 314afec4fef1203c3896ccab446db125 300 SUPERFAMILY SSF55120 9 221 6.62E-71 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_01020 314afec4fef1203c3896ccab446db125 300 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 31 179 8.7E-48 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 XFUD_01020 314afec4fef1203c3896ccab446db125 300 SUPERFAMILY SSF88697 242 299 3.63E-8 T 11-10-2018 IPR015947 PUA-like superfamily XFUD_01020 314afec4fef1203c3896ccab446db125 300 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 9 298 17.288 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:1.10.8.60 353 439 2.0E-31 T 11-10-2018 XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:1.10.8.60 654 751 5.1E-26 T 11-10-2018 XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 732 2.8E-20 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 SUPERFAMILY SSF81923 1 141 1.96E-54 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 310 1.2E-10 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 SUPERFAMILY SSF52540 169 431 2.68E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:3.40.50.300 441 652 9.6E-75 T 11-10-2018 XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 SMART SM00382 207 352 8.9E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 SMART SM00382 488 655 8.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:3.40.50.300 157 351 2.8E-63 T 11-10-2018 XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 SMART SM01086 654 743 9.3E-29 T 11-10-2018 IPR019489 Clp ATPase, C-terminal XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 SUPERFAMILY SSF52540 438 746 6.7E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 735 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 492 510 3.2E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 3.2E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 534 552 3.2E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 596 610 3.2E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 62 1.1E-10 T 11-10-2018 IPR004176 Clp, N-terminal XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 487 648 6.3E-45 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 XFUD_06075 c6f2ac76b93d24491bfacf739c08d6e2 758 Gene3D G3DSA:1.10.1780.10 1 142 2.0E-36 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 XFUD_11155 658a7d00facefca191cfbc89e2992b4b 316 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 7 311 1.9E-112 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 XFUD_11155 658a7d00facefca191cfbc89e2992b4b 316 SUPERFAMILY SSF55681 4 311 3.11E-68 T 11-10-2018 XFUD_11155 658a7d00facefca191cfbc89e2992b4b 316 Pfam PF00152 tRNA synthetases class II (D, K and N) 5 312 4.4E-34 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_11155 658a7d00facefca191cfbc89e2992b4b 316 Gene3D G3DSA:3.30.930.10 1 315 2.4E-92 T 11-10-2018 XFUD_11155 658a7d00facefca191cfbc89e2992b4b 316 PRINTS PR00982 Lysyl-tRNA synthetase signature 90 107 9.0E-7 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFUD_11155 658a7d00facefca191cfbc89e2992b4b 316 PRINTS PR00982 Lysyl-tRNA synthetase signature 200 216 9.0E-7 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFUD_11155 658a7d00facefca191cfbc89e2992b4b 316 PRINTS PR00982 Lysyl-tRNA synthetase signature 22 32 9.0E-7 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFUD_10490 1834854118c026864d79d014949d1e54 357 PIRSF PIRSF002401 1 357 2.7E-134 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type XFUD_10490 1834854118c026864d79d014949d1e54 357 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 341 3.8E-136 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 XFUD_10490 1834854118c026864d79d014949d1e54 357 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 XFUD_10490 1834854118c026864d79d014949d1e54 357 Pfam PF01926 50S ribosome-binding GTPase 162 294 1.6E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_10490 1834854118c026864d79d014949d1e54 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_10490 1834854118c026864d79d014949d1e54 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_10490 1834854118c026864d79d014949d1e54 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_10490 1834854118c026864d79d014949d1e54 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_10490 1834854118c026864d79d014949d1e54 357 Gene3D G3DSA:3.40.50.300 159 349 1.9E-46 T 11-10-2018 XFUD_10490 1834854118c026864d79d014949d1e54 357 Pfam PF01018 GTP1/OBG 4 158 1.3E-60 T 11-10-2018 IPR006169 GTP1/OBG domain XFUD_10490 1834854118c026864d79d014949d1e54 357 Gene3D G3DSA:2.70.210.12 1 158 9.9E-63 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily XFUD_10490 1834854118c026864d79d014949d1e54 357 Hamap MF_01454 GTPase Obg [obg]. 2 343 47.353 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 XFUD_10490 1834854118c026864d79d014949d1e54 357 SUPERFAMILY SSF52540 151 346 3.79E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_10490 1834854118c026864d79d014949d1e54 357 SUPERFAMILY SSF82051 2 158 2.75E-59 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily XFUD_00395 153afcd98476cac1ca5d2b6455489a53 101 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 100 4.0E-47 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 XFUD_00395 153afcd98476cac1ca5d2b6455489a53 101 SUPERFAMILY SSF75471 4 96 1.02E-24 T 11-10-2018 IPR035920 YhbY-like superfamily XFUD_00395 153afcd98476cac1ca5d2b6455489a53 101 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 88 3.5E-17 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 XFUD_00395 153afcd98476cac1ca5d2b6455489a53 101 Gene3D G3DSA:3.30.110.60 3 101 1.5E-27 T 11-10-2018 IPR035920 YhbY-like superfamily XFUD_00395 153afcd98476cac1ca5d2b6455489a53 101 SMART SM01103 5 88 1.1E-31 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 XFUD_08955 8238a2c074e4d3bb3775f1460efce5e6 1371 Pfam PF08401 Domain of unknown function (DUF1738) 220 335 2.2E-30 T 11-10-2018 IPR013610 Domain of unknown function DUF1738 XFUD_08955 8238a2c074e4d3bb3775f1460efce5e6 1371 Pfam PF13662 Toprim domain 1220 1292 1.0E-8 T 11-10-2018 IPR006171 TOPRIM domain XFUD_08955 8238a2c074e4d3bb3775f1460efce5e6 1371 SMART SM00493 1219 1297 3.2E-4 T 11-10-2018 IPR006171 TOPRIM domain XFUD_01270 8894eb9224b3a1620e4fd540a4de9379 432 SUPERFAMILY SSF116734 207 414 1.03E-46 T 11-10-2018 XFUD_01270 8894eb9224b3a1620e4fd540a4de9379 432 SUPERFAMILY SSF116734 30 202 3.43E-14 T 11-10-2018 XFUD_01270 8894eb9224b3a1620e4fd540a4de9379 432 Gene3D G3DSA:3.90.220.20 32 410 5.8E-61 T 11-10-2018 XFUD_01270 8894eb9224b3a1620e4fd540a4de9379 432 Pfam PF01420 Type I restriction modification DNA specificity domain 229 395 6.5E-19 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XFUD_01270 8894eb9224b3a1620e4fd540a4de9379 432 Gene3D G3DSA:1.10.287.1120 155 407 5.8E-61 T 11-10-2018 XFUD_01270 8894eb9224b3a1620e4fd540a4de9379 432 Gene3D G3DSA:3.90.220.20 219 363 5.8E-61 T 11-10-2018 XFUD_04415 d90699a843223813c682aad756ad3d9b 234 Hamap MF_00052_B Ribonuclease HII [rnhB]. 17 198 35.945 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 XFUD_04415 d90699a843223813c682aad756ad3d9b 234 Pfam PF01351 Ribonuclease HII 19 197 3.1E-35 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain XFUD_04415 d90699a843223813c682aad756ad3d9b 234 SUPERFAMILY SSF53098 12 219 1.32E-65 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFUD_04415 d90699a843223813c682aad756ad3d9b 234 Gene3D G3DSA:3.30.420.10 2 230 4.3E-73 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFUD_00630 c823135c5f7ab9fcdf06749de55ac186 155 TIGRFAM TIGR00576 dut: dUTP diphosphatase 16 153 3.3E-44 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 XFUD_00630 c823135c5f7ab9fcdf06749de55ac186 155 Gene3D G3DSA:2.70.40.10 2 153 1.0E-45 T 11-10-2018 IPR036157 dUTPase-like superfamily XFUD_00630 c823135c5f7ab9fcdf06749de55ac186 155 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 10 154 31.457 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 XFUD_00630 c823135c5f7ab9fcdf06749de55ac186 155 Pfam PF00692 dUTPase 23 153 9.9E-34 T 11-10-2018 IPR029054 dUTPase-like XFUD_00630 c823135c5f7ab9fcdf06749de55ac186 155 SUPERFAMILY SSF51283 9 154 9.42E-49 T 11-10-2018 IPR036157 dUTPase-like superfamily XFUD_04850 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.6E-18 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04850 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 133 148 1.6E-18 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04850 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 72 83 1.6E-18 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04850 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 148 166 1.6E-18 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04850 c7c0ad048e3edd0a70bd98e7ef724338 175 PRINTS PR00125 ATP synthase delta subunit signature 83 97 1.6E-18 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04850 c7c0ad048e3edd0a70bd98e7ef724338 175 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 173 2.4E-43 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04850 c7c0ad048e3edd0a70bd98e7ef724338 175 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 173 3.7E-34 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04850 c7c0ad048e3edd0a70bd98e7ef724338 175 Gene3D G3DSA:1.10.520.20 2 104 3.3E-21 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04850 c7c0ad048e3edd0a70bd98e7ef724338 175 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 175 17.241 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04850 c7c0ad048e3edd0a70bd98e7ef724338 175 SUPERFAMILY SSF47928 3 103 2.35E-19 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04775 98c6df7195ebdfde742f0435703fd6e6 485 SUPERFAMILY SSF111283 23 483 1.83E-131 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 XFUD_04775 98c6df7195ebdfde742f0435703fd6e6 485 PIRSF PIRSF004919 19 484 2.5E-137 T 11-10-2018 IPR025502 TldD XFUD_04775 98c6df7195ebdfde742f0435703fd6e6 485 Gene3D G3DSA:3.30.2290.10 15 243 1.2E-23 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal XFUD_04775 98c6df7195ebdfde742f0435703fd6e6 485 Pfam PF01523 Putative modulator of DNA gyrase 40 335 7.9E-74 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 XFUD_10615 3b688f6be146d07e87d626c859c5bc22 533 Pfam PF10091 Putative glucoamylase 225 471 2.3E-86 T 11-10-2018 IPR019282 Domain of unknown function DUF2329 XFUD_10615 3b688f6be146d07e87d626c859c5bc22 533 PIRSF PIRSF028431 12 498 2.0E-195 T 11-10-2018 IPR016883 Uncharacterised conserved protein UCP028431 XFUD_10615 3b688f6be146d07e87d626c859c5bc22 533 Gene3D G3DSA:1.50.10.140 52 492 2.2E-158 T 11-10-2018 XFUD_08285 93d4a201a55836fc57b03e0464cf8b04 268 Gene3D G3DSA:3.20.20.140 1 265 1.9E-93 T 11-10-2018 XFUD_08285 93d4a201a55836fc57b03e0464cf8b04 268 PIRSF PIRSF005902 1 264 2.1E-71 T 11-10-2018 IPR001130 TatD family GO:0016788 XFUD_08285 93d4a201a55836fc57b03e0464cf8b04 268 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XFUD_08285 93d4a201a55836fc57b03e0464cf8b04 268 SUPERFAMILY SSF51556 3 261 3.53E-80 T 11-10-2018 IPR032466 Metal-dependent hydrolase XFUD_08285 93d4a201a55836fc57b03e0464cf8b04 268 Pfam PF01026 TatD related DNase 4 260 1.0E-67 T 11-10-2018 IPR001130 TatD family GO:0016788 XFUD_11080 af1b2bbfc0465e6178733c68ddeaa736 148 SUPERFAMILY SSF54523 7 144 5.76E-25 T 11-10-2018 XFUD_11080 af1b2bbfc0465e6178733c68ddeaa736 148 Pfam PF00114 Pilin (bacterial filament) 35 144 2.3E-23 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XFUD_11080 af1b2bbfc0465e6178733c68ddeaa736 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 8.0E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_11080 af1b2bbfc0465e6178733c68ddeaa736 148 Gene3D G3DSA:3.30.700.10 7 145 1.1E-27 T 11-10-2018 XFUD_11080 af1b2bbfc0465e6178733c68ddeaa736 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 2.6E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_07350 48ccd038e81bb5d1114d790618f96826 261 Gene3D G3DSA:3.20.20.10 11 260 2.1E-82 T 11-10-2018 IPR029066 PLP-binding barrel XFUD_07350 48ccd038e81bb5d1114d790618f96826 261 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 26 249 27.916 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 XFUD_07350 48ccd038e81bb5d1114d790618f96826 261 PIRSF PIRSF004848 16 255 6.7E-68 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 XFUD_07350 48ccd038e81bb5d1114d790618f96826 261 Pfam PF01168 Alanine racemase, N-terminal domain 39 250 3.1E-22 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 XFUD_07350 48ccd038e81bb5d1114d790618f96826 261 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 23 250 1.4E-57 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 XFUD_07350 48ccd038e81bb5d1114d790618f96826 261 SUPERFAMILY SSF51419 18 248 4.84E-72 T 11-10-2018 IPR029066 PLP-binding barrel XFUD_02815 a983b6d15d103c4564ef0ae3ced10609 367 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 42 358 3.0E-71 T 11-10-2018 IPR003770 Endolytic murein transglycosylase XFUD_02815 a983b6d15d103c4564ef0ae3ced10609 367 Gene3D G3DSA:3.30.160.60 324 362 3.8E-13 T 11-10-2018 XFUD_02815 a983b6d15d103c4564ef0ae3ced10609 367 Pfam PF02618 YceG-like family 62 350 1.4E-72 T 11-10-2018 IPR003770 Endolytic murein transglycosylase XFUD_02815 a983b6d15d103c4564ef0ae3ced10609 367 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 18 355 31.227 T 11-10-2018 IPR003770 Endolytic murein transglycosylase XFUD_00330 c51550b90152d8f5222ce343f57bb34a 320 Pfam PF00419 Fimbrial protein 162 320 7.7E-15 T 11-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 XFUD_00330 c51550b90152d8f5222ce343f57bb34a 320 Gene3D G3DSA:2.60.40.1090 173 320 2.6E-28 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XFUD_00330 c51550b90152d8f5222ce343f57bb34a 320 SUPERFAMILY SSF49401 168 320 3.38E-24 T 11-10-2018 IPR008966 Adhesion domain superfamily XFUD_00330 c51550b90152d8f5222ce343f57bb34a 320 Gene3D G3DSA:2.60.40.3310 8 172 7.8E-34 T 11-10-2018 XFUD_06215 684aee17c36a62a33dcd52d49cc11212 278 Gene3D G3DSA:3.40.50.300 1 248 3.0E-60 T 11-10-2018 XFUD_06215 684aee17c36a62a33dcd52d49cc11212 278 Pfam PF00005 ABC transporter 17 172 5.0E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_06215 684aee17c36a62a33dcd52d49cc11212 278 SUPERFAMILY SSF52540 2 248 8.59E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_06215 684aee17c36a62a33dcd52d49cc11212 278 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 5.3E-108 T 11-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 XFUD_06215 684aee17c36a62a33dcd52d49cc11212 278 SMART SM00382 26 230 3.7E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_10465 c9fff63f7bc33a403cb79c7afc1345d4 167 ProSitePatterns PS00855 Signal peptidases II signature. 105 117 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XFUD_10465 c9fff63f7bc33a403cb79c7afc1345d4 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 138 154 1.1E-15 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XFUD_10465 c9fff63f7bc33a403cb79c7afc1345d4 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 1.1E-15 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XFUD_10465 c9fff63f7bc33a403cb79c7afc1345d4 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 1.1E-15 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XFUD_10465 c9fff63f7bc33a403cb79c7afc1345d4 167 TIGRFAM TIGR00077 lspA: signal peptidase II 10 162 8.4E-41 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XFUD_10465 c9fff63f7bc33a403cb79c7afc1345d4 167 Pfam PF01252 Signal peptidase (SPase) II 16 157 4.2E-36 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XFUD_10465 c9fff63f7bc33a403cb79c7afc1345d4 167 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 163 16.258 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 XFUD_11910 2d8be3c83137500164f714301b94e2e1 410 SUPERFAMILY SSF116734 197 403 2.78E-26 T 11-10-2018 XFUD_11910 2d8be3c83137500164f714301b94e2e1 410 Pfam PF01420 Type I restriction modification DNA specificity domain 67 156 3.3E-9 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XFUD_11910 2d8be3c83137500164f714301b94e2e1 410 Gene3D G3DSA:3.90.220.20 44 167 3.5E-11 T 11-10-2018 XFUD_11910 2d8be3c83137500164f714301b94e2e1 410 Gene3D G3DSA:3.90.220.20 198 397 9.2E-24 T 11-10-2018 XFUD_11910 2d8be3c83137500164f714301b94e2e1 410 SUPERFAMILY SSF116734 3 168 1.8E-25 T 11-10-2018 XFUD_05210 e9076584206a0f43b5cc03dd26780094 160 Pfam PF13185 GAF domain 55 153 9.3E-11 T 11-10-2018 IPR003018 GAF domain GO:0005515 XFUD_05210 e9076584206a0f43b5cc03dd26780094 160 Gene3D G3DSA:3.30.450.40 10 160 1.4E-61 T 11-10-2018 IPR029016 GAF-like domain superfamily XFUD_05210 e9076584206a0f43b5cc03dd26780094 160 SUPERFAMILY SSF55781 13 158 1.44E-42 T 11-10-2018 XFUD_05210 e9076584206a0f43b5cc03dd26780094 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 11-10-2018 IPR000614 Free Met sulfoxide reductase conserved site XFUD_02515 74e1aafac17a32fcca4e3410e7251cc8 296 SUPERFAMILY SSF103088 201 279 2.35E-7 T 11-10-2018 IPR036737 OmpA-like domain superfamily XFUD_00345 2d6695de2a2d3c5e8c79ed3226309214 184 Gene3D G3DSA:2.60.40.1090 26 184 4.9E-33 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XFUD_00345 2d6695de2a2d3c5e8c79ed3226309214 184 Pfam PF16970 Type-1 fimbrial protein, A 54 184 1.9E-19 T 11-10-2018 IPR039458 Type-1 fimbrial protein, A XFUD_00345 2d6695de2a2d3c5e8c79ed3226309214 184 SUPERFAMILY SSF49401 29 184 4.82E-25 T 11-10-2018 IPR008966 Adhesion domain superfamily XFUD_00790 b7d40a9d41c88b786a0269300a319066 318 Pfam PF16200 C-terminal region of band_7 241 297 2.7E-9 T 11-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 XFUD_00790 b7d40a9d41c88b786a0269300a319066 318 SMART SM00244 21 179 8.6E-46 T 11-10-2018 IPR001107 Band 7 domain XFUD_00790 b7d40a9d41c88b786a0269300a319066 318 Gene3D G3DSA:3.30.479.30 50 181 2.7E-39 T 11-10-2018 XFUD_00790 b7d40a9d41c88b786a0269300a319066 318 SUPERFAMILY SSF117892 52 186 1.83E-35 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily XFUD_00790 b7d40a9d41c88b786a0269300a319066 318 Pfam PF01145 SPFH domain / Band 7 family 25 194 5.4E-31 T 11-10-2018 IPR001107 Band 7 domain XFUD_00790 b7d40a9d41c88b786a0269300a319066 318 PRINTS PR00721 Stomatin signature 155 173 1.3E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFUD_00790 b7d40a9d41c88b786a0269300a319066 318 PRINTS PR00721 Stomatin signature 174 195 1.3E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFUD_00790 b7d40a9d41c88b786a0269300a319066 318 PRINTS PR00721 Stomatin signature 111 128 1.3E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFUD_00790 b7d40a9d41c88b786a0269300a319066 318 PRINTS PR00721 Stomatin signature 131 154 1.3E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFUD_00790 b7d40a9d41c88b786a0269300a319066 318 PRINTS PR00721 Stomatin signature 76 97 1.3E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 XFUD_10665 07878a783efc88572cc59b0b8503266b 247 Pfam PF01578 Cytochrome C assembly protein 10 187 2.0E-25 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 XFUD_10665 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 124 144 2.7E-40 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10665 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 65 85 2.7E-40 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10665 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 103 123 2.7E-40 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10665 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 48 65 2.7E-40 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10665 07878a783efc88572cc59b0b8503266b 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 159 185 2.7E-40 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_10665 07878a783efc88572cc59b0b8503266b 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 50 212 2.3E-59 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_01460 14b1c73d440e3d5b754ba0966b8eb72f 157 SUPERFAMILY SSF75217 1 154 4.36E-49 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases XFUD_01460 14b1c73d440e3d5b754ba0966b8eb72f 157 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 3 155 1.2E-48 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XFUD_01460 14b1c73d440e3d5b754ba0966b8eb72f 157 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.9E-48 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XFUD_01460 14b1c73d440e3d5b754ba0966b8eb72f 157 Gene3D G3DSA:3.40.1280.10 1 156 1.1E-49 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XFUD_01460 14b1c73d440e3d5b754ba0966b8eb72f 157 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.733 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XFUD_01460 14b1c73d440e3d5b754ba0966b8eb72f 157 PIRSF PIRSF004505 1 155 3.8E-48 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 XFUD_00655 9fbca8908e1af78a82632d5c5f955717 271 SMART SM00645 37 267 0.0013 T 11-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 XFUD_00655 9fbca8908e1af78a82632d5c5f955717 271 Pfam PF00112 Papain family cysteine protease 48 254 1.5E-13 T 11-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 XFUD_00655 9fbca8908e1af78a82632d5c5f955717 271 Gene3D G3DSA:3.90.70.10 4 271 7.2E-129 T 11-10-2018 XFUD_00655 9fbca8908e1af78a82632d5c5f955717 271 SUPERFAMILY SSF54001 30 256 1.97E-38 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XFUD_11735 86178772849314c58ff251d473d3410c 743 SUPERFAMILY SSF53659 4 739 0.0 T 11-10-2018 XFUD_11735 86178772849314c58ff251d473d3410c 743 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 3 739 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 XFUD_11735 86178772849314c58ff251d473d3410c 743 PIRSF PIRSF009407 1 742 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 XFUD_11735 86178772849314c58ff251d473d3410c 743 Gene3D G3DSA:3.40.718.10 418 658 3.5E-6 T 11-10-2018 XFUD_11735 86178772849314c58ff251d473d3410c 743 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 738 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 XFUD_03550 c5139a972ea7d2678663d6fe11572ca9 330 Gene3D G3DSA:3.40.718.10 2 324 9.3E-109 T 11-10-2018 XFUD_03550 c5139a972ea7d2678663d6fe11572ca9 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 323 34.978 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 XFUD_03550 c5139a972ea7d2678663d6fe11572ca9 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 315 6.7E-98 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 XFUD_03550 c5139a972ea7d2678663d6fe11572ca9 330 SUPERFAMILY SSF53659 4 323 1.17E-99 T 11-10-2018 XFUD_03550 c5139a972ea7d2678663d6fe11572ca9 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 319 1.3E-113 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 XFUD_09735 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Pfam PF01556 DnaJ C terminal domain 138 271 2.1E-24 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal XFUD_09735 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Pfam PF00226 DnaJ domain 5 66 2.5E-24 T 11-10-2018 IPR001623 DnaJ domain XFUD_09735 c27357ecf5cb43f88dba2cd9ed7cccc8 293 SUPERFAMILY SSF46565 1 105 5.5E-31 T 11-10-2018 IPR036869 Chaperone J-domain superfamily XFUD_09735 c27357ecf5cb43f88dba2cd9ed7cccc8 293 SUPERFAMILY SSF49493 200 282 3.14E-16 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 XFUD_09735 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Gene3D G3DSA:2.60.260.20 132 192 1.2E-13 T 11-10-2018 XFUD_09735 c27357ecf5cb43f88dba2cd9ed7cccc8 293 SUPERFAMILY SSF49493 131 200 1.57E-10 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 XFUD_09735 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Gene3D G3DSA:1.10.287.110 2 124 5.1E-33 T 11-10-2018 IPR036869 Chaperone J-domain superfamily XFUD_09735 c27357ecf5cb43f88dba2cd9ed7cccc8 293 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 11-10-2018 IPR018253 DnaJ domain, conserved site XFUD_09735 c27357ecf5cb43f88dba2cd9ed7cccc8 293 SMART SM00271 4 61 3.3E-27 T 11-10-2018 IPR001623 DnaJ domain XFUD_09735 c27357ecf5cb43f88dba2cd9ed7cccc8 293 PRINTS PR00625 DnaJ domain signature 7 25 5.3E-22 T 11-10-2018 IPR001623 DnaJ domain XFUD_09735 c27357ecf5cb43f88dba2cd9ed7cccc8 293 PRINTS PR00625 DnaJ domain signature 25 40 5.3E-22 T 11-10-2018 IPR001623 DnaJ domain XFUD_09735 c27357ecf5cb43f88dba2cd9ed7cccc8 293 PRINTS PR00625 DnaJ domain signature 41 61 5.3E-22 T 11-10-2018 IPR001623 DnaJ domain XFUD_09735 c27357ecf5cb43f88dba2cd9ed7cccc8 293 PRINTS PR00625 DnaJ domain signature 61 80 5.3E-22 T 11-10-2018 IPR001623 DnaJ domain XFUD_09735 c27357ecf5cb43f88dba2cd9ed7cccc8 293 Gene3D G3DSA:2.60.260.20 194 271 3.0E-25 T 11-10-2018 XFUD_05305 449523024670cfc82c9f25d31e28ab90 284 Pfam PF12852 Cupin 11 165 5.7E-26 T 11-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain XFUD_05305 449523024670cfc82c9f25d31e28ab90 284 Gene3D G3DSA:1.10.10.60 181 239 1.4E-11 T 11-10-2018 XFUD_05305 449523024670cfc82c9f25d31e28ab90 284 Pfam PF12833 Helix-turn-helix domain 202 280 1.9E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XFUD_05305 449523024670cfc82c9f25d31e28ab90 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 233 274 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 XFUD_05305 449523024670cfc82c9f25d31e28ab90 284 SMART SM00342 196 278 9.5E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 XFUD_05305 449523024670cfc82c9f25d31e28ab90 284 SUPERFAMILY SSF46689 179 230 3.94E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFUD_05305 449523024670cfc82c9f25d31e28ab90 284 Gene3D G3DSA:1.10.10.60 240 283 4.7E-10 T 11-10-2018 XFUD_05305 449523024670cfc82c9f25d31e28ab90 284 SUPERFAMILY SSF46689 232 280 7.62E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFUD_06340 9672d6ac25a1dc631d53c05ba52271a0 99 Pfam PF01192 RNA polymerase Rpb6 8 60 2.2E-16 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XFUD_06340 9672d6ac25a1dc631d53c05ba52271a0 99 SMART SM01409 8 62 7.8E-17 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XFUD_06340 9672d6ac25a1dc631d53c05ba52271a0 99 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.8E-20 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_06340 9672d6ac25a1dc631d53c05ba52271a0 99 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 63 17.729 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_06340 9672d6ac25a1dc631d53c05ba52271a0 99 SUPERFAMILY SSF63562 1 78 9.16E-25 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XFUD_06340 9672d6ac25a1dc631d53c05ba52271a0 99 Gene3D G3DSA:3.90.940.10 1 94 4.8E-28 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF50249 642 730 1.34E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:2.40.50.140 635 727 1.9E-27 T 11-10-2018 XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:1.10.150.310 503 634 4.5E-50 T 11-10-2018 XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 SMART SM00732 329 428 4.0E-37 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 Pfam PF09371 Tex-like protein N-terminal domain 14 196 1.0E-64 T 11-10-2018 IPR018974 Tex-like protein, N-terminal XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF158832 5 324 5.75E-112 T 11-10-2018 XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF53098 325 473 5.54E-51 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF47781 565 636 4.89E-20 T 11-10-2018 IPR010994 RuvA domain 2-like XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:3.30.420.140 328 455 2.2E-150 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 SMART SM00316 653 724 2.3E-24 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 Pfam PF12836 Helix-hairpin-helix motif 495 559 7.7E-27 T 11-10-2018 XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:1.10.3500.10 117 500 2.2E-150 T 11-10-2018 IPR023323 Tex-like domain superfamily XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 Gene3D G3DSA:1.10.10.650 3 114 9.2E-38 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 SUPERFAMILY SSF47781 474 561 8.45E-26 T 11-10-2018 IPR010994 RuvA domain 2-like XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 Pfam PF16921 Tex protein YqgF-like domain 330 455 2.3E-54 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain XFUD_09385 cf642a99e7065fb2b29ca3094d1dc5a9 772 Pfam PF00575 S1 RNA binding domain 653 724 5.9E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFUD_03620 e9fe3cde9cd1cabb944a652784022556 242 SUPERFAMILY SSF51261 47 239 1.99E-40 T 11-10-2018 IPR011055 Duplicated hybrid motif XFUD_03620 e9fe3cde9cd1cabb944a652784022556 242 Gene3D G3DSA:3.10.350.10 31 102 1.2E-15 T 11-10-2018 IPR036779 LysM domain superfamily XFUD_03620 e9fe3cde9cd1cabb944a652784022556 242 Pfam PF01476 LysM domain 48 88 2.8E-13 T 11-10-2018 IPR018392 LysM domain XFUD_03620 e9fe3cde9cd1cabb944a652784022556 242 Pfam PF01551 Peptidase family M23 148 235 6.2E-23 T 11-10-2018 IPR016047 Peptidase M23 XFUD_03620 e9fe3cde9cd1cabb944a652784022556 242 Gene3D G3DSA:2.70.70.10 115 240 5.6E-28 T 11-10-2018 IPR011055 Duplicated hybrid motif XFUD_03620 e9fe3cde9cd1cabb944a652784022556 242 SMART SM00257 46 90 6.9E-12 T 11-10-2018 IPR018392 LysM domain XFUD_11615 6f78528a79def11c3e3905094ceec36c 198 Pfam PF01914 MarC family integral membrane protein 3 192 3.3E-49 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 XFUD_04045 b3633948eb7b25a70d10092f92265ab7 562 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 41 524 3.3E-196 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 XFUD_04045 b3633948eb7b25a70d10092f92265ab7 562 Gene3D G3DSA:3.30.9.10 146 305 4.7E-7 T 11-10-2018 XFUD_04045 b3633948eb7b25a70d10092f92265ab7 562 Gene3D G3DSA:3.50.50.60 43 297 4.7E-7 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_04045 b3633948eb7b25a70d10092f92265ab7 562 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 41 526 1.9E-223 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 XFUD_04045 b3633948eb7b25a70d10092f92265ab7 562 SUPERFAMILY SSF51905 20 359 2.85E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_04045 b3633948eb7b25a70d10092f92265ab7 562 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 37 526 53.14 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 XFUD_01745 d046821d17a4b58bccd4e5474e3d6d31 218 Gene3D G3DSA:3.10.450.710 34 210 4.7E-41 T 11-10-2018 XFUD_01745 d046821d17a4b58bccd4e5474e3d6d31 218 Pfam PF05494 MlaC protein 45 206 4.0E-43 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC XFUD_01745 d046821d17a4b58bccd4e5474e3d6d31 218 PIRSF PIRSF004649 9 218 1.6E-55 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC XFUD_03940 fb13f2ed0c5d4b979c263d2968e69d18 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XFUD_03940 fb13f2ed0c5d4b979c263d2968e69d18 214 Gene3D G3DSA:2.160.10.10 99 214 8.2E-19 T 11-10-2018 XFUD_03940 fb13f2ed0c5d4b979c263d2968e69d18 214 SUPERFAMILY SSF51161 32 212 3.91E-29 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFUD_03940 fb13f2ed0c5d4b979c263d2968e69d18 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 122 150 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XFUD_03940 fb13f2ed0c5d4b979c263d2968e69d18 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XFUD_03940 fb13f2ed0c5d4b979c263d2968e69d18 214 Gene3D G3DSA:2.160.10.10 27 98 1.6E-12 T 11-10-2018 XFUD_03940 fb13f2ed0c5d4b979c263d2968e69d18 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 74 102 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XFUD_03940 fb13f2ed0c5d4b979c263d2968e69d18 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 85 117 4.6E-5 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_03940 fb13f2ed0c5d4b979c263d2968e69d18 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 155 189 3.0E-5 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_03940 fb13f2ed0c5d4b979c263d2968e69d18 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 49 81 1.1E-6 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_03580 56ebb3a1a88fa894bc0006fc23f1bf4f 891 SUPERFAMILY SSF49303 237 344 1.4E-18 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily XFUD_03580 56ebb3a1a88fa894bc0006fc23f1bf4f 891 Gene3D G3DSA:2.60.40.10 796 882 2.3E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFUD_03580 56ebb3a1a88fa894bc0006fc23f1bf4f 891 Pfam PF00703 Glycosyl hydrolases family 2 236 345 3.6E-9 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 XFUD_03580 56ebb3a1a88fa894bc0006fc23f1bf4f 891 SUPERFAMILY SSF49303 701 799 3.45E-10 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily XFUD_03580 56ebb3a1a88fa894bc0006fc23f1bf4f 891 Gene3D G3DSA:2.60.120.260 35 234 2.5E-59 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFUD_03580 56ebb3a1a88fa894bc0006fc23f1bf4f 891 Gene3D G3DSA:3.20.20.80 344 697 1.1E-120 T 11-10-2018 XFUD_03580 56ebb3a1a88fa894bc0006fc23f1bf4f 891 Gene3D G3DSA:2.60.40.10 235 343 7.4E-20 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFUD_03580 56ebb3a1a88fa894bc0006fc23f1bf4f 891 SUPERFAMILY SSF49785 37 233 3.74E-47 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFUD_03580 56ebb3a1a88fa894bc0006fc23f1bf4f 891 SUPERFAMILY SSF51445 343 699 4.39E-105 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFUD_03580 56ebb3a1a88fa894bc0006fc23f1bf4f 891 SUPERFAMILY SSF49303 801 877 1.87E-15 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily XFUD_11420 778b77276c9134a0af1db8e3372bbe7e 519 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 31 485 5.6E-130 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 XFUD_11420 778b77276c9134a0af1db8e3372bbe7e 519 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 2 501 42.956 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 XFUD_07915 27a7e84d7f5004c10b13c0e55cfa89e0 390 Gene3D G3DSA:3.40.50.300 25 206 2.9E-14 T 11-10-2018 XFUD_07915 27a7e84d7f5004c10b13c0e55cfa89e0 390 Pfam PF03969 AFG1-like ATPase 115 385 6.8E-90 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 XFUD_07915 27a7e84d7f5004c10b13c0e55cfa89e0 390 Pfam PF03969 AFG1-like ATPase 4 89 2.2E-18 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 XFUD_07915 27a7e84d7f5004c10b13c0e55cfa89e0 390 SUPERFAMILY SSF52540 58 200 5.32E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05615 4312f32b0e02d1ce6239d93cabd01810 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 20 29 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XFUD_05615 4312f32b0e02d1ce6239d93cabd01810 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 350 2.7E-136 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XFUD_05615 4312f32b0e02d1ce6239d93cabd01810 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XFUD_05615 4312f32b0e02d1ce6239d93cabd01810 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 7 349 3.3E-128 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XFUD_05615 4312f32b0e02d1ce6239d93cabd01810 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 4 352 49.373 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 XFUD_05615 4312f32b0e02d1ce6239d93cabd01810 354 SUPERFAMILY SSF51726 1 353 4.01E-110 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XFUD_05615 4312f32b0e02d1ce6239d93cabd01810 354 Gene3D G3DSA:3.20.20.210 1 354 6.4E-147 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 XFUD_11100 42d5e3c1e6def9e3c88a987ef58f028e 577 Gene3D G3DSA:3.40.50.300 302 577 6.7E-104 T 11-10-2018 XFUD_11100 42d5e3c1e6def9e3c88a987ef58f028e 577 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 15 577 2.0E-266 T 11-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 XFUD_11100 42d5e3c1e6def9e3c88a987ef58f028e 577 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 48 152 5.9E-19 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal XFUD_11100 42d5e3c1e6def9e3c88a987ef58f028e 577 SUPERFAMILY SSF52540 186 575 1.53E-98 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11100 42d5e3c1e6def9e3c88a987ef58f028e 577 SUPERFAMILY SSF160246 11 148 2.2E-34 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily XFUD_11100 42d5e3c1e6def9e3c88a987ef58f028e 577 Gene3D G3DSA:3.30.300.160 69 149 5.2E-8 T 11-10-2018 XFUD_11100 42d5e3c1e6def9e3c88a987ef58f028e 577 Pfam PF00437 Type II/IV secretion system protein 200 467 8.3E-89 T 11-10-2018 IPR001482 Type II/IV secretion system protein XFUD_11100 42d5e3c1e6def9e3c88a987ef58f028e 577 Gene3D G3DSA:3.30.450.90 176 300 1.1E-48 T 11-10-2018 XFUD_11100 42d5e3c1e6def9e3c88a987ef58f028e 577 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 395 409 - T 11-10-2018 IPR001482 Type II/IV secretion system protein XFUD_06670 74519aff46ac2d68684c4193be700541 112 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 15 104 5.3E-26 T 11-10-2018 IPR009241 Toxin HigB-like XFUD_07165 74519aff46ac2d68684c4193be700541 112 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 15 104 5.3E-26 T 11-10-2018 IPR009241 Toxin HigB-like XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 431 445 1.6E-70 T 11-10-2018 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 46 61 1.6E-70 T 11-10-2018 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 279 292 1.6E-70 T 11-10-2018 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 498 514 1.6E-70 T 11-10-2018 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 81 94 1.6E-70 T 11-10-2018 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 536 548 1.6E-70 T 11-10-2018 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 516 533 1.6E-70 T 11-10-2018 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 124 138 1.6E-70 T 11-10-2018 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR00418 DNA topoisomerase II family signature 746 762 1.6E-70 T 11-10-2018 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Pfam PF00204 DNA gyrase B 232 401 5.3E-57 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 SMART SM00387 42 186 4.0E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 184 1.5E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Gene3D G3DSA:3.40.50.670 409 578 5.0E-71 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 SUPERFAMILY SSF55874 16 221 1.24E-68 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Pfam PF01751 Toprim domain 430 539 5.9E-18 T 11-10-2018 IPR006171 TOPRIM domain XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 SMART SM00433 46 807 1.2E-253 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 SUPERFAMILY SSF54211 232 402 2.66E-54 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 191 206 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 16 26 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 231 253 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 371 385 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 323 339 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 206 219 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 385 405 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 767 779 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 481 490 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 PRINTS PR01159 DNA gyrase subunit B signature 783 799 2.5E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Gene3D G3DSA:3.30.230.10 232 403 2.1E-69 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 16 814 95.08 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 ProSitePatterns PS00177 DNA topoisomerase II signature. 433 441 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 16 814 5.3E-292 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Gene3D G3DSA:3.30.565.10 14 231 6.0E-87 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 SUPERFAMILY SSF56719 405 806 4.18E-83 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Gene3D G3DSA:3.40.50.670 694 812 8.0E-24 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFUD_00025 9a2f7bb8d4f64040731dca91a7f7b0f6 814 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 742 803 3.6E-28 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 XFUD_04200 0dbada4d5e19f53158ad9078da980607 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 162 32.756 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XFUD_04200 0dbada4d5e19f53158ad9078da980607 162 SUPERFAMILY SSF52374 6 160 9.38E-43 T 11-10-2018 XFUD_04200 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 2.6E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XFUD_04200 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 2.6E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XFUD_04200 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 2.6E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XFUD_04200 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 2.6E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XFUD_04200 0dbada4d5e19f53158ad9078da980607 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 2.6E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XFUD_04200 0dbada4d5e19f53158ad9078da980607 162 Gene3D G3DSA:3.40.50.620 1 162 9.3E-54 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_04200 0dbada4d5e19f53158ad9078da980607 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 67 9.9E-16 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XFUD_04200 0dbada4d5e19f53158ad9078da980607 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 8 161 3.9E-55 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 XFUD_04200 0dbada4d5e19f53158ad9078da980607 162 Pfam PF01467 Cytidylyltransferase-like 10 138 1.0E-21 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 XFUD_05590 6ae5c1788f08a2957497d0e603f7179e 226 Gene3D G3DSA:1.10.1670.40 16 207 4.7E-55 T 11-10-2018 XFUD_05590 6ae5c1788f08a2957497d0e603f7179e 226 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 52 196 1.2E-16 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XFUD_05590 6ae5c1788f08a2957497d0e603f7179e 226 Gene3D G3DSA:1.10.340.30 43 157 4.7E-55 T 11-10-2018 XFUD_05590 6ae5c1788f08a2957497d0e603f7179e 226 SMART SM00478 55 210 5.0E-10 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XFUD_05590 6ae5c1788f08a2957497d0e603f7179e 226 SUPERFAMILY SSF48150 40 208 2.62E-36 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 XFUD_02380 cc509a03397b7bd3b955bd69d7bfa8ac 320 Gene3D G3DSA:3.40.50.1400 163 300 2.0E-87 T 11-10-2018 XFUD_02380 cc509a03397b7bd3b955bd69d7bfa8ac 320 Pfam PF00762 Ferrochelatase 7 318 4.6E-100 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XFUD_02380 cc509a03397b7bd3b955bd69d7bfa8ac 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 319 35.77 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XFUD_02380 cc509a03397b7bd3b955bd69d7bfa8ac 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XFUD_02380 cc509a03397b7bd3b955bd69d7bfa8ac 320 TIGRFAM TIGR00109 hemH: ferrochelatase 5 315 1.5E-88 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 XFUD_02380 cc509a03397b7bd3b955bd69d7bfa8ac 320 SUPERFAMILY SSF53800 5 319 1.96E-92 T 11-10-2018 XFUD_02380 cc509a03397b7bd3b955bd69d7bfa8ac 320 Gene3D G3DSA:3.40.50.1400 7 318 2.0E-87 T 11-10-2018 XFUD_08225 b2c70aaf8540cd7f7d19328dc2e0a2a4 257 Pfam PF01618 MotA/TolQ/ExbB proton channel family 109 239 2.0E-37 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel XFUD_08225 b2c70aaf8540cd7f7d19328dc2e0a2a4 257 TIGRFAM TIGR02796 tolQ: protein TolQ 36 251 5.6E-86 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 XFUD_08225 b2c70aaf8540cd7f7d19328dc2e0a2a4 257 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 35 256 39.215 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 XFUD_12470 e607bb55206086f6ad00deb86d1e2be6 136 Pfam PF00436 Single-strand binding protein family 4 108 5.2E-40 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XFUD_12470 e607bb55206086f6ad00deb86d1e2be6 136 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 119 1.4E-45 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XFUD_12470 e607bb55206086f6ad00deb86d1e2be6 136 SUPERFAMILY SSF50249 3 136 4.86E-48 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_12470 e607bb55206086f6ad00deb86d1e2be6 136 Gene3D G3DSA:2.40.50.140 2 132 2.1E-44 T 11-10-2018 XFUD_12470 e607bb55206086f6ad00deb86d1e2be6 136 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 35.384 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XFUD_12470 e607bb55206086f6ad00deb86d1e2be6 136 PIRSF PIRSF002070 1 135 1.7E-35 T 11-10-2018 XFUD_01795 3039cbb3da73aa0fbb18becfcf76d54b 292 Pfam PF03631 Virulence factor BrkB 34 281 2.4E-51 T 11-10-2018 IPR017039 Virulence factor BrkB XFUD_01795 3039cbb3da73aa0fbb18becfcf76d54b 292 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 24 280 4.1E-30 T 11-10-2018 IPR017039 Virulence factor BrkB XFUD_01795 3039cbb3da73aa0fbb18becfcf76d54b 292 PIRSF PIRSF035875 5 292 2.8E-67 T 11-10-2018 IPR017039 Virulence factor BrkB XFUD_04690 403a751b8b53a20badf9caab155278c2 306 Gene3D G3DSA:3.30.70.2130 150 206 9.7E-6 T 11-10-2018 XFUD_04690 403a751b8b53a20badf9caab155278c2 306 PIRSF PIRSF015283 3 306 1.9E-99 T 11-10-2018 IPR016631 Regulatory, RpfE XFUD_03250 b132452141dc5303432040f084ce6c71 431 SMART SM00849 156 345 4.9E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFUD_03250 b132452141dc5303432040f084ce6c71 431 Gene3D G3DSA:3.60.15.10 143 426 1.0E-103 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFUD_03250 b132452141dc5303432040f084ce6c71 431 Pfam PF04273 Putative phosphatase (DUF442) 3 111 7.8E-50 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 XFUD_03250 b132452141dc5303432040f084ce6c71 431 SUPERFAMILY SSF56281 151 426 1.16E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFUD_03250 b132452141dc5303432040f084ce6c71 431 Gene3D G3DSA:3.90.190.10 1 142 5.5E-37 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like XFUD_03250 b132452141dc5303432040f084ce6c71 431 SUPERFAMILY SSF52799 5 98 2.02E-8 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like XFUD_03250 b132452141dc5303432040f084ce6c71 431 Pfam PF00753 Metallo-beta-lactamase superfamily 158 345 1.1E-23 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFUD_03250 b132452141dc5303432040f084ce6c71 431 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 4 132 3.0E-28 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 XFUD_00850 2d70452182e6024548cb0cffaece69d5 199 Pfam PF13489 Methyltransferase domain 30 164 3.1E-8 T 11-10-2018 XFUD_00850 2d70452182e6024548cb0cffaece69d5 199 SUPERFAMILY SSF53335 12 182 3.19E-18 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_00850 2d70452182e6024548cb0cffaece69d5 199 Gene3D G3DSA:3.40.50.150 1 182 5.1E-17 T 11-10-2018 XFUD_00305 e885f6e81dffed753f10fb382a051dfc 455 Gene3D G3DSA:1.10.260.30 328 451 1.5E-40 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 XFUD_00305 e885f6e81dffed753f10fb382a051dfc 455 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 8.1E-171 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 XFUD_00305 e885f6e81dffed753f10fb382a051dfc 455 SMART SM00382 99 277 1.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_00305 e885f6e81dffed753f10fb382a051dfc 455 SUPERFAMILY SSF52540 42 353 1.17E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00305 e885f6e81dffed753f10fb382a051dfc 455 Pfam PF02978 Signal peptide binding domain 328 427 1.0E-32 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 XFUD_00305 e885f6e81dffed753f10fb382a051dfc 455 Pfam PF00448 SRP54-type protein, GTPase domain 100 295 2.2E-72 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFUD_00305 e885f6e81dffed753f10fb382a051dfc 455 SMART SM00963 1 86 9.3E-34 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFUD_00305 e885f6e81dffed753f10fb382a051dfc 455 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.6E-19 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFUD_00305 e885f6e81dffed753f10fb382a051dfc 455 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFUD_00305 e885f6e81dffed753f10fb382a051dfc 455 Gene3D G3DSA:3.40.50.300 90 285 1.9E-117 T 11-10-2018 XFUD_00305 e885f6e81dffed753f10fb382a051dfc 455 SMART SM00962 100 296 1.3E-109 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFUD_00305 e885f6e81dffed753f10fb382a051dfc 455 Gene3D G3DSA:1.20.120.140 5 306 1.9E-117 T 11-10-2018 XFUD_00305 e885f6e81dffed753f10fb382a051dfc 455 SUPERFAMILY SSF47446 328 430 4.25E-37 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 XFUD_00305 e885f6e81dffed753f10fb382a051dfc 455 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 33.543 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 XFUD_04985 e1705667dc5d42bb1449ee39f0f87ca6 332 Gene3D G3DSA:3.30.1360.10 17 227 1.0E-78 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_04985 e1705667dc5d42bb1449ee39f0f87ca6 332 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 325 2.0E-34 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_04985 e1705667dc5d42bb1449ee39f0f87ca6 332 SUPERFAMILY SSF56553 53 177 4.19E-41 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_04985 e1705667dc5d42bb1449ee39f0f87ca6 332 Gene3D G3DSA:1.10.150.20 245 327 6.4E-34 T 11-10-2018 XFUD_04985 e1705667dc5d42bb1449ee39f0f87ca6 332 Gene3D G3DSA:2.170.120.12 53 176 1.0E-78 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_04985 e1705667dc5d42bb1449ee39f0f87ca6 332 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 314 2.8E-104 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_04985 e1705667dc5d42bb1449ee39f0f87ca6 332 SMART SM00662 23 233 1.2E-103 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_04985 e1705667dc5d42bb1449ee39f0f87ca6 332 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 33.482 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_04985 e1705667dc5d42bb1449ee39f0f87ca6 332 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 307 2.0E-23 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_04985 e1705667dc5d42bb1449ee39f0f87ca6 332 SUPERFAMILY SSF55257 10 232 9.81E-31 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_04985 e1705667dc5d42bb1449ee39f0f87ca6 332 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 154 5.0E-23 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_04985 e1705667dc5d42bb1449ee39f0f87ca6 332 SUPERFAMILY SSF47789 250 323 1.18E-24 T 11-10-2018 XFUD_04985 e1705667dc5d42bb1449ee39f0f87ca6 332 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 3.0E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 XFUD_09605 da69584e72d78cc104fd6f5da6937dd0 462 SUPERFAMILY SSF55103 189 461 4.09E-54 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 XFUD_09605 da69584e72d78cc104fd6f5da6937dd0 462 Gene3D G3DSA:3.30.465.10 94 214 4.8E-41 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 XFUD_09605 da69584e72d78cc104fd6f5da6937dd0 462 Gene3D G3DSA:3.30.43.10 1 92 2.1E-23 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 XFUD_09605 da69584e72d78cc104fd6f5da6937dd0 462 Pfam PF01565 FAD binding domain 40 178 2.8E-41 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 XFUD_09605 da69584e72d78cc104fd6f5da6937dd0 462 Gene3D G3DSA:3.30.70.2190 216 331 6.6E-24 T 11-10-2018 XFUD_09605 da69584e72d78cc104fd6f5da6937dd0 462 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 459 1.1E-54 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 XFUD_09605 da69584e72d78cc104fd6f5da6937dd0 462 Gene3D G3DSA:1.10.45.10 420 460 3.4E-15 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 XFUD_09605 da69584e72d78cc104fd6f5da6937dd0 462 SUPERFAMILY SSF56176 5 216 1.27E-66 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 XFUD_09605 da69584e72d78cc104fd6f5da6937dd0 462 Gene3D G3DSA:3.30.70.2740 334 419 2.9E-25 T 11-10-2018 XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 2.0E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 778 822 1.2E-15 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 2.4E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 827 873 1.1E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 584 9.6E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 3.3E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 Gene3D G3DSA:3.90.199.10 33 520 3.1E-223 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 875 23.995 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 SUPERFAMILY SSF101904 532 881 3.66E-103 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 873 0.0 T 11-10-2018 XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 SMART SM00434 11 498 3.1E-275 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 Gene3D G3DSA:1.10.268.10 369 492 3.1E-223 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 SUPERFAMILY SSF56719 30 520 2.62E-178 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 Gene3D G3DSA:3.30.1360.40 236 332 3.1E-223 T 11-10-2018 XFUD_11140 9e6edcdd664fbd8f36c6e66a9016961e 893 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 8.6E-154 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 XFUD_05860 9c9536d28dd477309864c488a51c67e9 164 Pfam PF00436 Single-strand binding protein family 5 108 2.0E-38 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XFUD_05860 9c9536d28dd477309864c488a51c67e9 164 PIRSF PIRSF002070 1 163 2.4E-36 T 11-10-2018 XFUD_05860 9c9536d28dd477309864c488a51c67e9 164 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 35.543 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XFUD_05860 9c9536d28dd477309864c488a51c67e9 164 SUPERFAMILY SSF50249 3 164 2.02E-55 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_05860 9c9536d28dd477309864c488a51c67e9 164 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 164 1.5E-50 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XFUD_05860 9c9536d28dd477309864c488a51c67e9 164 Gene3D G3DSA:2.40.50.140 1 119 2.8E-43 T 11-10-2018 XFUD_04955 b1d5ebce29ed42983b5bf7f965362aaf 179 Pfam PF03719 Ribosomal protein S5, C-terminal domain 98 168 1.7E-28 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 XFUD_04955 b1d5ebce29ed42983b5bf7f965362aaf 179 Pfam PF00333 Ribosomal protein S5, N-terminal domain 24 85 5.0E-24 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 XFUD_04955 b1d5ebce29ed42983b5bf7f965362aaf 179 Gene3D G3DSA:3.30.230.10 85 176 4.3E-35 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup XFUD_04955 b1d5ebce29ed42983b5bf7f965362aaf 179 ProSitePatterns PS00585 Ribosomal protein S5 signature. 39 71 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site XFUD_04955 b1d5ebce29ed42983b5bf7f965362aaf 179 SUPERFAMILY SSF54211 90 170 8.34E-26 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_04955 b1d5ebce29ed42983b5bf7f965362aaf 179 Gene3D G3DSA:3.30.160.20 13 84 1.2E-26 T 11-10-2018 XFUD_04955 b1d5ebce29ed42983b5bf7f965362aaf 179 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 22 172 4.4E-64 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 XFUD_04955 b1d5ebce29ed42983b5bf7f965362aaf 179 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 174 33.347 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 XFUD_04955 b1d5ebce29ed42983b5bf7f965362aaf 179 SUPERFAMILY SSF54768 20 87 1.46E-20 T 11-10-2018 XFUD_03225 6ea544cb9bfb3c3750efa67dd833d105 191 Pfam PF00692 dUTPase 81 186 4.0E-7 T 11-10-2018 IPR029054 dUTPase-like XFUD_03225 6ea544cb9bfb3c3750efa67dd833d105 191 SUPERFAMILY SSF51283 3 190 7.33E-50 T 11-10-2018 IPR036157 dUTPase-like superfamily XFUD_03225 6ea544cb9bfb3c3750efa67dd833d105 191 Gene3D G3DSA:2.70.40.10 1 160 1.8E-53 T 11-10-2018 IPR036157 dUTPase-like superfamily XFUD_03225 6ea544cb9bfb3c3750efa67dd833d105 191 Hamap MF_00146 dCTP deaminase [dcd]. 1 191 27.723 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 XFUD_03225 6ea544cb9bfb3c3750efa67dd833d105 191 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 190 4.7E-47 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 XFUD_00015 863dd12bdde465029251562484acf40d 364 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 336 4.5E-17 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal XFUD_00015 863dd12bdde465029251562484acf40d 364 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 364 79.606 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 XFUD_00015 863dd12bdde465029251562484acf40d 364 Gene3D G3DSA:1.20.1050.90 123 302 3.4E-73 T 11-10-2018 XFUD_00015 863dd12bdde465029251562484acf40d 364 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 338 1.7E-76 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 XFUD_00015 863dd12bdde465029251562484acf40d 364 Gene3D G3DSA:3.40.50.300 7 338 3.4E-73 T 11-10-2018 XFUD_00015 863dd12bdde465029251562484acf40d 364 ProSitePatterns PS00618 RecF protein signature 2. 303 321 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 XFUD_00015 863dd12bdde465029251562484acf40d 364 ProSitePatterns PS00617 RecF protein signature 1. 120 140 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 XFUD_00015 863dd12bdde465029251562484acf40d 364 SUPERFAMILY SSF52540 1 335 2.55E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05670 8e14b3ad2570f0ae6eee889fa82dd772 319 SUPERFAMILY SSF161098 36 303 2.24E-49 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_05670 8e14b3ad2570f0ae6eee889fa82dd772 319 Gene3D G3DSA:1.10.3720.10 37 309 1.0E-56 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_05670 8e14b3ad2570f0ae6eee889fa82dd772 319 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 36 308 2.0E-84 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 XFUD_05670 8e14b3ad2570f0ae6eee889fa82dd772 319 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 37 310 3.6E-126 T 11-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 XFUD_05670 8e14b3ad2570f0ae6eee889fa82dd772 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 308 5.1E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFUD_04550 bc63a0cb161e938c387a5f353d665682 131 PIRSF PIRSF000178 1 125 1.9E-37 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04550 bc63a0cb161e938c387a5f353d665682 131 Gene3D G3DSA:1.20.1300.10 1 128 3.2E-34 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04550 bc63a0cb161e938c387a5f353d665682 131 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 118 1.8E-24 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04550 bc63a0cb161e938c387a5f353d665682 131 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 122 1.8E-36 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04550 bc63a0cb161e938c387a5f353d665682 131 SUPERFAMILY SSF81343 3 124 1.06E-31 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04550 bc63a0cb161e938c387a5f353d665682 131 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 6 30 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04090 8f902ba236ea8ecf288a14c6b9ee4e2c 157 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 22 147 7.1E-41 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 XFUD_04090 8f902ba236ea8ecf288a14c6b9ee4e2c 157 Pfam PF01029 NusB family 24 146 7.3E-32 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 XFUD_04090 8f902ba236ea8ecf288a14c6b9ee4e2c 157 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 20 151 21.606 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 XFUD_04090 8f902ba236ea8ecf288a14c6b9ee4e2c 157 Gene3D G3DSA:1.10.940.10 15 154 9.2E-44 T 11-10-2018 IPR035926 NusB-like superfamily XFUD_04090 8f902ba236ea8ecf288a14c6b9ee4e2c 157 SUPERFAMILY SSF48013 21 149 1.23E-38 T 11-10-2018 IPR035926 NusB-like superfamily XFUD_08480 b8dfde7d9bd5359cbe6bb5774e1519c9 138 SUPERFAMILY SSF52172 13 132 4.13E-35 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_08480 b8dfde7d9bd5359cbe6bb5774e1519c9 138 SMART SM00448 14 127 8.3E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_08480 b8dfde7d9bd5359cbe6bb5774e1519c9 138 Gene3D G3DSA:3.40.50.12740 13 137 4.8E-37 T 11-10-2018 XFUD_08480 b8dfde7d9bd5359cbe6bb5774e1519c9 138 Pfam PF00072 Response regulator receiver domain 16 128 6.6E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_03245 7c24c8abb0446693974c84607e26b847 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 44 3.7E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFUD_03245 7c24c8abb0446693974c84607e26b847 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 3.7E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFUD_03245 7c24c8abb0446693974c84607e26b847 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 3.7E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFUD_03245 7c24c8abb0446693974c84607e26b847 114 Gene3D G3DSA:1.10.10.10 13 114 2.2E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_03245 7c24c8abb0446693974c84607e26b847 114 SMART SM00418 27 105 6.4E-23 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFUD_03245 7c24c8abb0446693974c84607e26b847 114 SUPERFAMILY SSF46785 13 109 2.95E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_03245 7c24c8abb0446693974c84607e26b847 114 Pfam PF12840 Helix-turn-helix domain 27 82 2.8E-11 T 11-10-2018 XFUD_09325 44888277fb2955eff35ffee9ae833806 127 Gene3D G3DSA:2.60.40.1470 1 127 2.7E-46 T 11-10-2018 IPR036767 ApaG domain superfamily XFUD_09325 44888277fb2955eff35ffee9ae833806 127 Pfam PF04379 ApaG domain 20 104 1.1E-33 T 11-10-2018 IPR007474 ApaG domain XFUD_09325 44888277fb2955eff35ffee9ae833806 127 SUPERFAMILY SSF110069 6 127 1.83E-46 T 11-10-2018 IPR036767 ApaG domain superfamily XFUD_09325 44888277fb2955eff35ffee9ae833806 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 31.609 T 11-10-2018 IPR023065 Uncharacterised protein family ApaG XFUD_08215 25cc545c08a56c189d55fb3f75cd43ae 346 TIGRFAM TIGR02794 tolA_full: protein TolA 20 333 1.7E-20 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 XFUD_08215 25cc545c08a56c189d55fb3f75cd43ae 346 SUPERFAMILY SSF74653 234 345 5.3E-13 T 11-10-2018 XFUD_08215 25cc545c08a56c189d55fb3f75cd43ae 346 Gene3D G3DSA:3.30.1150.10 194 346 2.9E-14 T 11-10-2018 XFUD_08215 25cc545c08a56c189d55fb3f75cd43ae 346 Pfam PF13103 TonB C terminal 257 329 1.9E-8 T 11-10-2018 XFUD_06480 386e9ef8ff8e5b797bce7735a4a2dffc 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_06480 386e9ef8ff8e5b797bce7735a4a2dffc 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_06480 386e9ef8ff8e5b797bce7735a4a2dffc 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_06480 386e9ef8ff8e5b797bce7735a4a2dffc 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_06480 386e9ef8ff8e5b797bce7735a4a2dffc 311 Pfam PF03466 LysR substrate binding domain 87 293 2.5E-49 T 11-10-2018 IPR005119 LysR, substrate-binding XFUD_06480 386e9ef8ff8e5b797bce7735a4a2dffc 311 Gene3D G3DSA:3.40.190.10 161 263 1.0E-67 T 11-10-2018 XFUD_06480 386e9ef8ff8e5b797bce7735a4a2dffc 311 Gene3D G3DSA:3.40.190.10 91 290 1.0E-67 T 11-10-2018 XFUD_06480 386e9ef8ff8e5b797bce7735a4a2dffc 311 SUPERFAMILY SSF46785 1 110 3.24E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_06480 386e9ef8ff8e5b797bce7735a4a2dffc 311 Gene3D G3DSA:1.10.10.10 1 85 4.8E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_06480 386e9ef8ff8e5b797bce7735a4a2dffc 311 SUPERFAMILY SSF53850 88 296 4.5E-44 T 11-10-2018 XFUD_10290 5da900fbda9c8cf728b1ad9f2eb230f0 467 Pfam PF02706 Chain length determinant protein 20 110 9.9E-11 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 XFUD_10290 5da900fbda9c8cf728b1ad9f2eb230f0 467 Pfam PF13807 G-rich domain on putative tyrosine kinase 381 453 3.1E-15 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain XFUD_03635 e58b7beda7c6523c004b01b4925830f8 262 Pfam PF01975 Survival protein SurE 3 188 1.7E-61 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XFUD_03635 e58b7beda7c6523c004b01b4925830f8 262 Gene3D G3DSA:3.40.1210.10 1 256 1.7E-93 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XFUD_03635 e58b7beda7c6523c004b01b4925830f8 262 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 239 5.2E-73 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XFUD_03635 e58b7beda7c6523c004b01b4925830f8 262 SUPERFAMILY SSF64167 1 254 1.7E-83 T 11-10-2018 XFUD_03635 e58b7beda7c6523c004b01b4925830f8 262 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 256 41.451 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 362 435 2.1E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 18 87 1.7E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 280 348 2.9E-22 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 449 521 1.5E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 189 261 2.5E-22 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 104 172 3.0E-10 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 191 261 5.4E-28 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 450 521 1.6E-16 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 20 88 8.3E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 363 435 1.4E-20 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 276 348 6.4E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 104 172 7.7E-9 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 104 186 4.39E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 521 6.4E-208 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 188 269 8.5E-28 T 11-10-2018 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 270 358 6.3E-29 T 11-10-2018 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 99 184 1.3E-7 T 11-10-2018 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 359 445 1.4E-23 T 11-10-2018 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 1 113 1.57E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 85 104 6.2E-85 T 11-10-2018 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 156 176 6.2E-85 T 11-10-2018 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 109 125 6.2E-85 T 11-10-2018 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 213 234 6.2E-85 T 11-10-2018 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 40 54 6.2E-85 T 11-10-2018 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 331 349 6.2E-85 T 11-10-2018 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 291 310 6.2E-85 T 11-10-2018 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 22 40 6.2E-85 T 11-10-2018 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 127 144 6.2E-85 T 11-10-2018 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 430 537 3.02E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PIRSF PIRSF002111 1 535 2.9E-210 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 256 357 3.06E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 191 276 7.26E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 7 98 3.4E-15 T 11-10-2018 XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 348 440 1.22E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_10565 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 446 527 2.1E-18 T 11-10-2018 XFUD_00235 8dea310cc01a0fac3fd54d145eae9f7f 260 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 250 3.4E-62 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XFUD_00235 8dea310cc01a0fac3fd54d145eae9f7f 260 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 256 77.857 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XFUD_00235 8dea310cc01a0fac3fd54d145eae9f7f 260 SUPERFAMILY SSF63892 4 251 1.31E-76 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XFUD_00235 8dea310cc01a0fac3fd54d145eae9f7f 260 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 249 4.7E-79 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 XFUD_00235 8dea310cc01a0fac3fd54d145eae9f7f 260 Gene3D G3DSA:3.20.20.70 1 258 1.2E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_07850 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 Gene3D G3DSA:3.40.50.300 10 207 3.9E-44 T 11-10-2018 XFUD_07850 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 Gene3D G3DSA:1.10.8.300 210 314 4.9E-26 T 11-10-2018 XFUD_07850 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 SUPERFAMILY SSF52540 19 290 2.62E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_07850 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 PIRSF PIRSF002849 2 317 7.5E-119 T 11-10-2018 XFUD_07850 2b5b6a0cd21cdd2cd49f4da8c99f1b6b 317 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 48 178 2.3E-62 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 XFUD_11650 a8345879efeb203baa4cba1cc9c5c2b1 452 SUPERFAMILY SSF53474 259 448 1.41E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_11650 a8345879efeb203baa4cba1cc9c5c2b1 452 Gene3D G3DSA:3.40.50.1820 234 450 2.5E-9 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_11650 a8345879efeb203baa4cba1cc9c5c2b1 452 Pfam PF06057 Bacterial virulence protein (VirJ) 263 450 7.5E-82 T 11-10-2018 IPR010333 Bacterial virulence XFUD_11650 a8345879efeb203baa4cba1cc9c5c2b1 452 PIRSF PIRSF029063 1 452 1.2E-177 T 11-10-2018 IPR011225 Type IV secretory pathway, VirJ component XFUD_07430 0e1b91cb0d5029c2c1b4869286135118 348 SMART SM00829 10 341 7.0E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 XFUD_07430 0e1b91cb0d5029c2c1b4869286135118 348 SUPERFAMILY SSF51735 147 311 1.21E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_07430 0e1b91cb0d5029c2c1b4869286135118 348 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 177 204 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XFUD_07430 0e1b91cb0d5029c2c1b4869286135118 348 Gene3D G3DSA:3.90.180.10 12 341 3.8E-129 T 11-10-2018 XFUD_07430 0e1b91cb0d5029c2c1b4869286135118 348 SUPERFAMILY SSF50129 7 170 1.67E-50 T 11-10-2018 IPR011032 GroES-like superfamily XFUD_07430 0e1b91cb0d5029c2c1b4869286135118 348 Gene3D G3DSA:3.40.50.720 158 313 3.8E-129 T 11-10-2018 XFUD_07430 0e1b91cb0d5029c2c1b4869286135118 348 Pfam PF00107 Zinc-binding dehydrogenase 184 305 4.0E-22 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XFUD_07430 0e1b91cb0d5029c2c1b4869286135118 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XFUD_07430 0e1b91cb0d5029c2c1b4869286135118 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 142 2.8E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XFUD_04080 70be1beb0eb2645a62f6c0ec90596393 377 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 204 37.212 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFUD_04080 70be1beb0eb2645a62f6c0ec90596393 377 Gene3D G3DSA:3.90.870.10 1 207 4.7E-84 T 11-10-2018 XFUD_04080 70be1beb0eb2645a62f6c0ec90596393 377 SUPERFAMILY SSF142695 205 365 5.1E-37 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XFUD_04080 70be1beb0eb2645a62f6c0ec90596393 377 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 10 200 1.3E-68 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFUD_04080 70be1beb0eb2645a62f6c0ec90596393 377 Pfam PF00925 GTP cyclohydrolase II 209 363 1.6E-25 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XFUD_04080 70be1beb0eb2645a62f6c0ec90596393 377 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 11 199 1.9E-81 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFUD_04080 70be1beb0eb2645a62f6c0ec90596393 377 PIRSF PIRSF001259 2 370 6.7E-109 T 11-10-2018 XFUD_04080 70be1beb0eb2645a62f6c0ec90596393 377 SUPERFAMILY SSF55821 6 203 4.35E-82 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XFUD_05815 32dbdd035d17b7c87bbe6660589a62ee 1466 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 797 871 2.8E-13 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 XFUD_05815 32dbdd035d17b7c87bbe6660589a62ee 1466 Pfam PF00270 DEAD/DEAH box helicase 92 233 1.0E-6 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFUD_05815 32dbdd035d17b7c87bbe6660589a62ee 1466 Pfam PF11898 Domain of unknown function (DUF3418) 887 1462 7.9E-169 T 11-10-2018 IPR024590 RNA helicase HrpA, C-terminal XFUD_05815 32dbdd035d17b7c87bbe6660589a62ee 1466 Gene3D G3DSA:3.40.50.300 33 252 5.4E-77 T 11-10-2018 XFUD_05815 32dbdd035d17b7c87bbe6660589a62ee 1466 SMART SM00487 72 259 5.4E-27 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_05815 32dbdd035d17b7c87bbe6660589a62ee 1466 Pfam PF00271 Helicase conserved C-terminal domain 319 443 1.0E-10 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_05815 32dbdd035d17b7c87bbe6660589a62ee 1466 SUPERFAMILY SSF52540 77 644 1.13E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05815 32dbdd035d17b7c87bbe6660589a62ee 1466 Gene3D G3DSA:1.20.120.1080 510 609 8.6E-20 T 11-10-2018 XFUD_05815 32dbdd035d17b7c87bbe6660589a62ee 1466 Gene3D G3DSA:3.40.50.300 301 461 1.9E-53 T 11-10-2018 XFUD_05815 32dbdd035d17b7c87bbe6660589a62ee 1466 SMART SM00382 92 410 9.2E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_05815 32dbdd035d17b7c87bbe6660589a62ee 1466 SMART SM00847 527 617 2.4E-32 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 XFUD_05815 32dbdd035d17b7c87bbe6660589a62ee 1466 Pfam PF04408 Helicase associated domain (HA2) 530 603 1.5E-17 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 XFUD_05815 32dbdd035d17b7c87bbe6660589a62ee 1466 SMART SM00490 344 444 2.2E-13 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_10065 4ea474be9803d39c8ff729c8f2384cf2 144 Pfam PF04865 Baseplate J-like protein 17 104 2.2E-11 T 11-10-2018 IPR006949 Baseplate protein J-like XFUD_00220 31270be9bc937b16c8b4513ec5b7a1d1 397 Gene3D G3DSA:3.40.50.80 260 394 3.7E-30 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XFUD_00220 31270be9bc937b16c8b4513ec5b7a1d1 397 SUPERFAMILY SSF46458 5 139 2.0E-35 T 11-10-2018 IPR009050 Globin-like superfamily XFUD_00220 31270be9bc937b16c8b4513ec5b7a1d1 397 SUPERFAMILY SSF63380 152 256 9.02E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XFUD_00220 31270be9bc937b16c8b4513ec5b7a1d1 397 PRINTS PR00409 Phthalate dioxygenase reductase family signature 266 285 6.2E-11 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 XFUD_00220 31270be9bc937b16c8b4513ec5b7a1d1 397 PRINTS PR00409 Phthalate dioxygenase reductase family signature 229 243 6.2E-11 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 XFUD_00220 31270be9bc937b16c8b4513ec5b7a1d1 397 PRINTS PR00409 Phthalate dioxygenase reductase family signature 181 191 6.2E-11 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 XFUD_00220 31270be9bc937b16c8b4513ec5b7a1d1 397 Hamap MF_01252 Flavohemoprotein [hmp]. 4 394 51.46 T 11-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 XFUD_00220 31270be9bc937b16c8b4513ec5b7a1d1 397 Pfam PF00175 Oxidoreductase NAD-binding domain 267 368 1.6E-16 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 XFUD_00220 31270be9bc937b16c8b4513ec5b7a1d1 397 Pfam PF00970 Oxidoreductase FAD-binding domain 162 255 9.0E-5 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 XFUD_00220 31270be9bc937b16c8b4513ec5b7a1d1 397 SUPERFAMILY SSF52343 262 391 4.32E-32 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XFUD_00220 31270be9bc937b16c8b4513ec5b7a1d1 397 Pfam PF00042 Globin 10 105 4.5E-8 T 11-10-2018 IPR000971 Globin GO:0020037 XFUD_00220 31270be9bc937b16c8b4513ec5b7a1d1 397 Gene3D G3DSA:1.10.490.10 5 145 1.3E-47 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 XFUD_00220 31270be9bc937b16c8b4513ec5b7a1d1 397 Gene3D G3DSA:2.40.30.10 154 256 5.7E-29 T 11-10-2018 XFUD_06865 5b7e4c1c513cd797c13ec3348e86651b 309 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 6.0E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFUD_06865 5b7e4c1c513cd797c13ec3348e86651b 309 Gene3D G3DSA:3.40.50.150 134 302 4.4E-33 T 11-10-2018 XFUD_06865 5b7e4c1c513cd797c13ec3348e86651b 309 SMART SM00418 8 88 4.2E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFUD_06865 5b7e4c1c513cd797c13ec3348e86651b 309 Pfam PF08241 Methyltransferase domain 152 245 3.3E-22 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 XFUD_06865 5b7e4c1c513cd797c13ec3348e86651b 309 SUPERFAMILY SSF53335 127 293 1.11E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_06865 5b7e4c1c513cd797c13ec3348e86651b 309 Gene3D G3DSA:1.10.10.10 1 92 3.0E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_06865 5b7e4c1c513cd797c13ec3348e86651b 309 SUPERFAMILY SSF46785 1 80 4.85E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_06865 5b7e4c1c513cd797c13ec3348e86651b 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.0E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFUD_06865 5b7e4c1c513cd797c13ec3348e86651b 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.0E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFUD_06865 5b7e4c1c513cd797c13ec3348e86651b 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.0E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 XFUD_04255 8bd386e7f4128fad1f8345d3a26a048c 146 Pfam PF02657 Fe-S metabolism associated domain 21 139 1.7E-42 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like XFUD_04255 8bd386e7f4128fad1f8345d3a26a048c 146 Gene3D G3DSA:3.90.1010.10 11 146 6.2E-47 T 11-10-2018 XFUD_04255 8bd386e7f4128fad1f8345d3a26a048c 146 SUPERFAMILY SSF82649 15 144 6.8E-42 T 11-10-2018 XFUD_02160 c471e2c018e495cdc04847b8090a7343 154 Pfam PF00959 Phage lysozyme 37 143 3.6E-17 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XFUD_02160 c471e2c018e495cdc04847b8090a7343 154 Gene3D G3DSA:1.10.530.40 2 152 1.0E-48 T 11-10-2018 XFUD_02160 c471e2c018e495cdc04847b8090a7343 154 SUPERFAMILY SSF53955 9 151 8.7E-49 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_04365 7ab4bdcbcd43292d0513e05deae5493a 298 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 17 288 5.1E-89 T 11-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 XFUD_04365 7ab4bdcbcd43292d0513e05deae5493a 298 Pfam PF13622 Thioesterase-like superfamily 32 287 7.3E-59 T 11-10-2018 XFUD_04365 7ab4bdcbcd43292d0513e05deae5493a 298 Gene3D G3DSA:3.10.129.90 7 291 2.3E-96 T 11-10-2018 XFUD_04365 7ab4bdcbcd43292d0513e05deae5493a 298 SUPERFAMILY SSF54637 14 119 2.75E-37 T 11-10-2018 IPR029069 HotDog domain superfamily XFUD_04365 7ab4bdcbcd43292d0513e05deae5493a 298 SUPERFAMILY SSF54637 121 288 8.95E-49 T 11-10-2018 IPR029069 HotDog domain superfamily XFUD_08915 bd591f7e3e6dcacc0e2ce34b1ab8603e 238 SUPERFAMILY SSF54427 103 237 2.85E-15 T 11-10-2018 IPR032710 NTF2-like domain superfamily XFUD_08915 bd591f7e3e6dcacc0e2ce34b1ab8603e 238 Gene3D G3DSA:3.10.450.230 132 238 4.7E-6 T 11-10-2018 XFUD_08915 bd591f7e3e6dcacc0e2ce34b1ab8603e 238 Pfam PF04335 VirB8 protein 26 237 5.1E-49 T 11-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 XFUD_05490 b0a710dc9832fc0777bf20acdf059926 276 SMART SM00382 44 234 4.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_05490 b0a710dc9832fc0777bf20acdf059926 276 Pfam PF00005 ABC transporter 37 186 2.6E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_05490 b0a710dc9832fc0777bf20acdf059926 276 Gene3D G3DSA:3.40.50.300 17 273 8.4E-61 T 11-10-2018 XFUD_05490 b0a710dc9832fc0777bf20acdf059926 276 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_05490 b0a710dc9832fc0777bf20acdf059926 276 SUPERFAMILY SSF52540 20 245 3.79E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_08765 a89969ec34c7df104d937d8fcdfce5d2 228 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 5 225 4.0E-71 T 11-10-2018 IPR012808 Conserved hypothetical protein CHP02453 XFUD_08765 a89969ec34c7df104d937d8fcdfce5d2 228 Pfam PF09365 Conserved hypothetical protein (DUF2461) 8 219 1.2E-54 T 11-10-2018 IPR012808 Conserved hypothetical protein CHP02453 XFUD_08765 a89969ec34c7df104d937d8fcdfce5d2 228 PIRSF PIRSF028451 1 228 4.2E-95 T 11-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 XFUD_05130 aa3d8eae98ca9e13e49b18694af72d0a 54 Pfam PF00471 Ribosomal protein L33 7 52 5.8E-18 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_05130 aa3d8eae98ca9e13e49b18694af72d0a 54 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 54 2.3E-24 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_05130 aa3d8eae98ca9e13e49b18694af72d0a 54 ProSitePatterns PS00582 Ribosomal protein L33 signature. 20 39 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_05130 aa3d8eae98ca9e13e49b18694af72d0a 54 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 4 52 14.671 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_05130 aa3d8eae98ca9e13e49b18694af72d0a 54 Gene3D G3DSA:2.20.28.120 1 54 6.8E-27 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_05130 aa3d8eae98ca9e13e49b18694af72d0a 54 SUPERFAMILY SSF57829 3 52 1.71E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 XFUD_00895 86b7a92bced90d68af3350770abd6b6b 344 Gene3D G3DSA:1.20.970.10 1 72 1.4E-28 T 11-10-2018 XFUD_00895 86b7a92bced90d68af3350770abd6b6b 344 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 36.78 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 XFUD_00895 86b7a92bced90d68af3350770abd6b6b 344 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 336 4.1E-123 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 XFUD_00895 86b7a92bced90d68af3350770abd6b6b 344 SUPERFAMILY SSF52418 78 339 3.66E-94 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XFUD_00895 86b7a92bced90d68af3350770abd6b6b 344 Pfam PF00591 Glycosyl transferase family, a/b domain 77 327 8.1E-90 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 XFUD_00895 86b7a92bced90d68af3350770abd6b6b 344 Gene3D G3DSA:3.40.1030.10 73 341 3.1E-105 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XFUD_00895 86b7a92bced90d68af3350770abd6b6b 344 SUPERFAMILY SSF47648 3 71 5.49E-16 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 XFUD_00895 86b7a92bced90d68af3350770abd6b6b 344 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 68 7.5E-11 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 XFUD_04340 0e24df19a1b2ee1eeb63f0a63265d80d 158 SUPERFAMILY SSF53927 3 152 4.68E-53 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 XFUD_04340 0e24df19a1b2ee1eeb63f0a63265d80d 158 Gene3D G3DSA:3.40.140.10 2 156 5.7E-54 T 11-10-2018 XFUD_04340 0e24df19a1b2ee1eeb63f0a63265d80d 158 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 XFUD_04340 0e24df19a1b2ee1eeb63f0a63265d80d 158 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 8 151 43.618 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 XFUD_04340 0e24df19a1b2ee1eeb63f0a63265d80d 158 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 103 2.4E-24 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain XFUD_02495 5e8bd3c811b2f159fca8e0685df9e64f 218 Pfam PF16357 Putative PepSY_TM-like 24 218 8.8E-82 T 11-10-2018 IPR032307 Putative PepSY TM-like protein XFUD_04630 bd16ae65fc17f8c5967d00d90e1648aa 652 Gene3D G3DSA:3.30.870.10 473 560 3.1E-10 T 11-10-2018 XFUD_04630 bd16ae65fc17f8c5967d00d90e1648aa 652 Gene3D G3DSA:3.30.870.10 304 414 1.6E-7 T 11-10-2018 XFUD_04630 bd16ae65fc17f8c5967d00d90e1648aa 652 SMART SM00155 186 213 0.018 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XFUD_04630 bd16ae65fc17f8c5967d00d90e1648aa 652 SMART SM00155 497 524 0.37 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XFUD_04630 bd16ae65fc17f8c5967d00d90e1648aa 652 Gene3D G3DSA:3.30.870.10 74 258 3.2E-38 T 11-10-2018 XFUD_04630 bd16ae65fc17f8c5967d00d90e1648aa 652 Pfam PF13091 PLD-like domain 90 245 3.0E-17 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XFUD_04630 bd16ae65fc17f8c5967d00d90e1648aa 652 Pfam PF13091 PLD-like domain 336 548 4.9E-12 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XFUD_04630 bd16ae65fc17f8c5967d00d90e1648aa 652 SUPERFAMILY SSF56024 44 258 1.08E-37 T 11-10-2018 XFUD_04630 bd16ae65fc17f8c5967d00d90e1648aa 652 SUPERFAMILY SSF56024 313 565 5.1E-26 T 11-10-2018 XFUD_07600 797804dff4048db8dcafe007baa69d4a 164 Pfam PF07883 Cupin domain 72 140 3.8E-12 T 11-10-2018 IPR013096 Cupin 2, conserved barrel XFUD_07600 797804dff4048db8dcafe007baa69d4a 164 Gene3D G3DSA:2.60.120.10 33 163 1.1E-49 T 11-10-2018 IPR014710 RmlC-like jelly roll fold XFUD_07600 797804dff4048db8dcafe007baa69d4a 164 SUPERFAMILY SSF51182 43 162 3.26E-31 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 SUPERFAMILY SSF47819 527 596 2.03E-21 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 Pfam PF00570 HRDC domain 529 596 1.3E-22 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 SUPERFAMILY SSF52540 202 454 1.35E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 8 598 2.5E-281 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 Pfam PF09382 RQC domain 403 509 2.3E-43 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 SMART SM00487 16 212 2.2E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 Gene3D G3DSA:1.10.10.10 336 521 1.0E-53 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 SMART SM00956 406 509 2.7E-59 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 Pfam PF16124 RecQ zinc-binding 337 399 1.2E-19 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 Gene3D G3DSA:1.10.150.80 526 599 1.7E-21 T 11-10-2018 XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 SMART SM00341 526 599 5.8E-11 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 SUPERFAMILY SSF52540 4 191 1.36E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 10 458 3.5E-155 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 Pfam PF00271 Helicase conserved C-terminal domain 221 324 8.5E-13 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 Gene3D G3DSA:3.40.50.300 1 202 9.8E-81 T 11-10-2018 XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 Gene3D G3DSA:3.40.50.300 203 334 1.1E-35 T 11-10-2018 XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 Pfam PF00270 DEAD/DEAH box helicase 24 179 3.4E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFUD_05805 74e57ef5cfb8fc8139426d0b53c861e6 600 SMART SM00490 244 325 5.5E-23 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_01320 cace6e0cca97c693bd46ac7f803e9325 118 Gene3D G3DSA:1.20.58.1610 1 118 4.8E-41 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01320 cace6e0cca97c693bd46ac7f803e9325 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 117 1.0E-35 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01320 cace6e0cca97c693bd46ac7f803e9325 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 18.722 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 XFUD_11255 24a6877297f024abb27be436b4ed6f32 405 SUPERFAMILY SSF47384 197 239 3.34E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFUD_11255 24a6877297f024abb27be436b4ed6f32 405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 400 3.1E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_11255 24a6877297f024abb27be436b4ed6f32 405 SMART SM00387 293 401 5.8E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_11255 24a6877297f024abb27be436b4ed6f32 405 SUPERFAMILY SSF55874 268 399 4.98E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_11255 24a6877297f024abb27be436b4ed6f32 405 Gene3D G3DSA:1.10.287.130 176 259 5.4E-6 T 11-10-2018 XFUD_11255 24a6877297f024abb27be436b4ed6f32 405 Gene3D G3DSA:3.30.565.10 260 404 3.7E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 13 314 2.5E-82 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 12 316 38.145 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 SUPERFAMILY SSF53671 11 315 2.62E-87 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 Gene3D G3DSA:3.40.50.1370 145 301 1.3E-83 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 156 9.2E-35 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 166 312 1.0E-23 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 Gene3D G3DSA:3.40.50.1370 13 312 1.3E-83 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 49 71 3.5E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 144 161 3.5E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 295 309 3.5E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 271 276 3.5E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 230 239 3.5E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 87 96 3.5E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 145 156 2.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 2.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 279 302 2.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFUD_09705 ac7c5226e19951f35886749ce38c0cc1 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 2.5E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 XFUD_08650 99d37d681ed691bd62afd0405b88f6d2 124 Gene3D G3DSA:1.10.260.40 2 66 3.8E-16 T 11-10-2018 XFUD_08650 99d37d681ed691bd62afd0405b88f6d2 124 Pfam PF01381 Helix-turn-helix 8 63 1.3E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_08650 99d37d681ed691bd62afd0405b88f6d2 124 SUPERFAMILY SSF47413 3 66 1.08E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_08650 99d37d681ed691bd62afd0405b88f6d2 124 SMART SM00530 7 63 4.8E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_00060 194ffe017311155eead1e9a8c7fff051 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 134 1.3E-24 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 XFUD_00060 194ffe017311155eead1e9a8c7fff051 136 Gene3D G3DSA:3.30.420.270 63 134 7.4E-6 T 11-10-2018 XFUD_00960 28007a32e809f27471a0942751b7d830 421 SUPERFAMILY SSF81301 7 159 8.07E-39 T 11-10-2018 XFUD_00960 28007a32e809f27471a0942751b7d830 421 SUPERFAMILY SSF81891 161 371 3.27E-43 T 11-10-2018 XFUD_00960 28007a32e809f27471a0942751b7d830 421 Gene3D G3DSA:3.30.460.10 2 158 2.1E-57 T 11-10-2018 XFUD_00960 28007a32e809f27471a0942751b7d830 421 Gene3D G3DSA:1.10.3090.10 160 406 2.3E-77 T 11-10-2018 XFUD_00960 28007a32e809f27471a0942751b7d830 421 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 4 394 8.5E-144 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 XFUD_00960 28007a32e809f27471a0942751b7d830 421 Pfam PF12626 Polymerase A arginine-rich C-terminus 305 407 2.6E-27 T 11-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain XFUD_00960 28007a32e809f27471a0942751b7d830 421 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 3 419 35.913 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 XFUD_00960 28007a32e809f27471a0942751b7d830 421 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 189 251 2.4E-21 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XFUD_00960 28007a32e809f27471a0942751b7d830 421 Pfam PF01743 Poly A polymerase head domain 35 162 1.1E-35 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XFUD_06430 cbf31f40e31294b56a3bf62c83bfc0cd 132 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.0E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_06430 cbf31f40e31294b56a3bf62c83bfc0cd 132 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_06430 cbf31f40e31294b56a3bf62c83bfc0cd 132 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 6.7E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_07425 fbd7b4fb68515bef25693e58421c1ff3 192 Pfam PF03358 NADPH-dependent FMN reductase 47 107 1.3E-10 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 XFUD_07425 fbd7b4fb68515bef25693e58421c1ff3 192 SUPERFAMILY SSF52218 3 186 1.02E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFUD_07425 fbd7b4fb68515bef25693e58421c1ff3 192 Gene3D G3DSA:3.40.50.360 2 189 3.1E-53 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFUD_07425 fbd7b4fb68515bef25693e58421c1ff3 192 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 XFUD_03080 c31fe47cd48982865fd724a64510e524 169 Pfam PF04985 Phage tail tube protein FII 7 168 4.9E-54 T 11-10-2018 IPR006498 Tail tube protein XFUD_03080 c31fe47cd48982865fd724a64510e524 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 169 7.5E-79 T 11-10-2018 IPR006498 Tail tube protein XFUD_10785 c31fe47cd48982865fd724a64510e524 169 Pfam PF04985 Phage tail tube protein FII 7 168 4.9E-54 T 11-10-2018 IPR006498 Tail tube protein XFUD_10785 c31fe47cd48982865fd724a64510e524 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 169 7.5E-79 T 11-10-2018 IPR006498 Tail tube protein XFUD_02020 707858e76d4d7060168dd808e6a6e9da 179 SUPERFAMILY SSF54523 29 175 9.42E-21 T 11-10-2018 XFUD_02020 707858e76d4d7060168dd808e6a6e9da 179 Pfam PF00114 Pilin (bacterial filament) 36 169 6.9E-25 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XFUD_02020 707858e76d4d7060168dd808e6a6e9da 179 Gene3D G3DSA:3.30.700.10 8 170 5.1E-19 T 11-10-2018 XFUD_11570 eaceb479df3fe3cb0aea807d416615ee 361 Gene3D G3DSA:3.30.70.1660 112 343 2.5E-94 T 11-10-2018 XFUD_11570 eaceb479df3fe3cb0aea807d416615ee 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 4.7E-155 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 XFUD_11570 eaceb479df3fe3cb0aea807d416615ee 361 Gene3D G3DSA:3.30.160.20 210 297 2.5E-94 T 11-10-2018 XFUD_11570 eaceb479df3fe3cb0aea807d416615ee 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XFUD_11570 eaceb479df3fe3cb0aea807d416615ee 361 Pfam PF00472 RF-1 domain 213 321 1.3E-41 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XFUD_11570 eaceb479df3fe3cb0aea807d416615ee 361 SMART SM00937 63 178 1.7E-63 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 XFUD_11570 eaceb479df3fe3cb0aea807d416615ee 361 Pfam PF03462 PCRF domain 13 203 3.1E-70 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 XFUD_11570 eaceb479df3fe3cb0aea807d416615ee 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 358 39.818 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 XFUD_11570 eaceb479df3fe3cb0aea807d416615ee 361 SUPERFAMILY SSF75620 12 354 3.14E-129 T 11-10-2018 XFUD_05545 b0f1dc7779d99550ea68f58bba6fa96e 718 Pfam PF13291 ACT domain 639 716 2.8E-14 T 11-10-2018 IPR002912 ACT domain XFUD_05545 b0f1dc7779d99550ea68f58bba6fa96e 718 Pfam PF02824 TGS domain 394 452 5.0E-20 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 XFUD_05545 b0f1dc7779d99550ea68f58bba6fa96e 718 Pfam PF04607 Region found in RelA / SpoT proteins 241 351 1.9E-37 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 XFUD_05545 b0f1dc7779d99550ea68f58bba6fa96e 718 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 120 715 2.4E-158 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 XFUD_05545 b0f1dc7779d99550ea68f58bba6fa96e 718 Pfam PF13328 HD domain 44 182 3.4E-16 T 11-10-2018 IPR003607 HD/PDEase domain XFUD_05545 b0f1dc7779d99550ea68f58bba6fa96e 718 Gene3D G3DSA:3.30.460.10 199 331 5.0E-48 T 11-10-2018 XFUD_05545 b0f1dc7779d99550ea68f58bba6fa96e 718 SUPERFAMILY SSF55021 641 716 2.75E-7 T 11-10-2018 XFUD_05545 b0f1dc7779d99550ea68f58bba6fa96e 718 SUPERFAMILY SSF109604 40 197 7.22E-24 T 11-10-2018 XFUD_05545 b0f1dc7779d99550ea68f58bba6fa96e 718 Gene3D G3DSA:3.30.70.260 639 718 5.9E-10 T 11-10-2018 XFUD_05545 b0f1dc7779d99550ea68f58bba6fa96e 718 Gene3D G3DSA:1.10.3210.10 50 197 9.1E-21 T 11-10-2018 XFUD_05545 b0f1dc7779d99550ea68f58bba6fa96e 718 Gene3D G3DSA:3.10.20.30 386 462 2.8E-30 T 11-10-2018 IPR012675 Beta-grasp domain superfamily XFUD_05545 b0f1dc7779d99550ea68f58bba6fa96e 718 SUPERFAMILY SSF81271 387 452 2.03E-19 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XFUD_05545 b0f1dc7779d99550ea68f58bba6fa96e 718 SUPERFAMILY SSF81301 199 370 6.38E-62 T 11-10-2018 XFUD_05545 b0f1dc7779d99550ea68f58bba6fa96e 718 SMART SM00954 241 351 2.5E-66 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 XFUD_01925 ff782a25f9a798c51e9a3a8b706f35e1 212 Pfam PF09976 Tetratricopeptide repeat-like domain 17 202 1.1E-29 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 XFUD_01925 ff782a25f9a798c51e9a3a8b706f35e1 212 Gene3D G3DSA:1.25.40.10 42 196 3.5E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_06920 b936c92282c083d671070bc7fee3c769 344 Gene3D G3DSA:3.40.50.300 101 344 2.7E-103 T 11-10-2018 XFUD_06920 b936c92282c083d671070bc7fee3c769 344 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 3.1E-161 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 XFUD_06920 b936c92282c083d671070bc7fee3c769 344 SUPERFAMILY SSF52540 5 336 2.46E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_06920 b936c92282c083d671070bc7fee3c769 344 Gene3D G3DSA:3.30.450.90 1 100 2.3E-35 T 11-10-2018 XFUD_06920 b936c92282c083d671070bc7fee3c769 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-10-2018 IPR001482 Type II/IV secretion system protein XFUD_06920 b936c92282c083d671070bc7fee3c769 344 Pfam PF00437 Type II/IV secretion system protein 12 268 1.8E-47 T 11-10-2018 IPR001482 Type II/IV secretion system protein XFUD_06920 b936c92282c083d671070bc7fee3c769 344 SMART SM00382 122 262 0.0012 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_08180 2e01c0331b69307648d33a804fff99fb 510 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 25 506 5.9E-105 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 XFUD_08180 2e01c0331b69307648d33a804fff99fb 510 SUPERFAMILY SSF103473 18 312 3.14E-20 T 11-10-2018 IPR036259 MFS transporter superfamily XFUD_08180 2e01c0331b69307648d33a804fff99fb 510 Gene3D G3DSA:1.20.1250.20 18 510 7.8E-121 T 11-10-2018 XFUD_08180 2e01c0331b69307648d33a804fff99fb 510 Pfam PF00854 POT family 103 467 1.9E-65 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 XFUD_08180 2e01c0331b69307648d33a804fff99fb 510 SUPERFAMILY SSF103473 240 506 4.71E-8 T 11-10-2018 IPR036259 MFS transporter superfamily XFUD_08180 2e01c0331b69307648d33a804fff99fb 510 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 164 176 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 XFUD_02745 a616de1145c9958c4df370f2caa8b12d 435 SUPERFAMILY SSF56037 315 429 3.92E-25 T 11-10-2018 XFUD_02745 a616de1145c9958c4df370f2caa8b12d 435 Gene3D G3DSA:1.20.59.20 228 310 7.4E-15 T 11-10-2018 XFUD_02745 a616de1145c9958c4df370f2caa8b12d 435 Pfam PF09179 TilS substrate binding domain 240 307 1.2E-13 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XFUD_02745 a616de1145c9958c4df370f2caa8b12d 435 SUPERFAMILY SSF82829 229 311 4.19E-18 T 11-10-2018 XFUD_02745 a616de1145c9958c4df370f2caa8b12d 435 SMART SM00977 354 427 2.1E-19 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XFUD_02745 a616de1145c9958c4df370f2caa8b12d 435 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 354 400 3.8E-17 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XFUD_02745 a616de1145c9958c4df370f2caa8b12d 435 SUPERFAMILY SSF52402 11 222 7.28E-53 T 11-10-2018 XFUD_02745 a616de1145c9958c4df370f2caa8b12d 435 Pfam PF01171 PP-loop family 15 190 2.1E-58 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 XFUD_02745 a616de1145c9958c4df370f2caa8b12d 435 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 299 20.967 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XFUD_02745 a616de1145c9958c4df370f2caa8b12d 435 Pfam PF11734 TilS substrate C-terminal domain 356 427 9.6E-20 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XFUD_02745 a616de1145c9958c4df370f2caa8b12d 435 Gene3D G3DSA:3.40.50.620 7 224 8.5E-63 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_02745 a616de1145c9958c4df370f2caa8b12d 435 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 15 195 8.7E-49 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 SUPERFAMILY SSF50249 69 128 1.76E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 SMART SM01185 69 123 4.3E-21 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 SUPERFAMILY SSF50249 130 187 2.57E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 SMART SM00841 131 186 6.7E-34 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 2.9E-21 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 Gene3D G3DSA:2.40.50.140 66 127 3.9E-29 T 11-10-2018 XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 Gene3D G3DSA:2.30.30.30 1 65 3.1E-19 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 PIRSF PIRSF005901 2 188 7.3E-63 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 62 5.1E-19 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 SUPERFAMILY SSF50104 5 64 2.11E-15 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 47.709 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 3.3E-26 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 Gene3D G3DSA:2.40.50.140 130 188 2.3E-28 T 11-10-2018 XFUD_10730 9366f662a6470e7066c8abc51182f3da 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 4.2E-73 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 XFUD_02720 5fd3f8cebc3005a9a6efd445f2860a1f 179 Pfam PF00877 NlpC/P60 family 69 176 1.9E-29 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain XFUD_02720 5fd3f8cebc3005a9a6efd445f2860a1f 179 Gene3D G3DSA:3.90.1720.10 29 173 1.6E-41 T 11-10-2018 XFUD_02720 5fd3f8cebc3005a9a6efd445f2860a1f 179 SUPERFAMILY SSF54001 46 178 3.92E-42 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XFUD_04700 587735b13a933354f34ef6dc9d9f418d 302 Pfam PF03462 PCRF domain 10 148 8.8E-48 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 XFUD_04700 587735b13a933354f34ef6dc9d9f418d 302 SMART SM00937 13 123 1.5E-54 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 XFUD_04700 587735b13a933354f34ef6dc9d9f418d 302 SUPERFAMILY SSF75620 6 291 3.79E-120 T 11-10-2018 XFUD_04700 587735b13a933354f34ef6dc9d9f418d 302 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 173 189 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XFUD_04700 587735b13a933354f34ef6dc9d9f418d 302 Gene3D G3DSA:3.30.70.1660 58 286 1.0E-98 T 11-10-2018 XFUD_04700 587735b13a933354f34ef6dc9d9f418d 302 Pfam PF00472 RF-1 domain 156 265 3.1E-41 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 XFUD_04700 587735b13a933354f34ef6dc9d9f418d 302 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 293 32.104 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 XFUD_04700 587735b13a933354f34ef6dc9d9f418d 302 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 291 1.1E-137 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 XFUD_04700 587735b13a933354f34ef6dc9d9f418d 302 Gene3D G3DSA:3.30.160.20 154 249 1.0E-98 T 11-10-2018 XFUD_09065 f7819a3360518a52377f44c158ea409e 205 Gene3D G3DSA:1.10.357.10 12 204 5.9E-27 T 11-10-2018 XFUD_09065 f7819a3360518a52377f44c158ea409e 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 2.5E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XFUD_09065 f7819a3360518a52377f44c158ea409e 205 SUPERFAMILY SSF48498 90 204 6.58E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily XFUD_09065 f7819a3360518a52377f44c158ea409e 205 SUPERFAMILY SSF46689 12 95 2.72E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFUD_09065 f7819a3360518a52377f44c158ea409e 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 6.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XFUD_09065 f7819a3360518a52377f44c158ea409e 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 6.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 SUPERFAMILY SSF52374 115 451 3.75E-89 T 11-10-2018 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 SUPERFAMILY SSF47323 436 562 1.37E-34 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 121 136 2.4E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 160 173 2.4E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 136 152 2.4E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 308 329 2.4E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 27 562 2.7E-126 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 Gene3D G3DSA:1.10.730.10 436 562 1.4E-152 T 11-10-2018 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 23 92 1.8E-22 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 131 140 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 Pfam PF00750 tRNA synthetases class I (R) 103 410 3.5E-27 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 Gene3D G3DSA:3.30.1360.70 4 112 4.2E-23 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 Gene3D G3DSA:3.40.50.620 122 435 1.4E-152 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 SUPERFAMILY SSF55190 5 112 2.22E-25 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 Pfam PF05746 DALR anticodon binding domain 441 562 1.0E-33 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 SMART SM01016 3 92 4.1E-34 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 562 24.692 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 XFUD_00615 1be1000909b6f6ef3cbe9169ed5e5ab1 562 SMART SM00836 441 562 2.6E-44 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 XFUD_01035 ebc3a50876462fe1873e5588043a0a14 144 Gene3D G3DSA:1.10.10.10 17 134 3.5E-43 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_01035 ebc3a50876462fe1873e5588043a0a14 144 Pfam PF01638 HxlR-like helix-turn-helix 35 122 2.1E-28 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type XFUD_01035 ebc3a50876462fe1873e5588043a0a14 144 SUPERFAMILY SSF46785 21 138 1.29E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_02920 9106ed71bf82f87a72e810ead41f169d 221 Pfam PF00717 Peptidase S24-like 138 193 1.4E-7 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XFUD_02920 9106ed71bf82f87a72e810ead41f169d 221 SUPERFAMILY SSF47413 2 68 3.38E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_02920 9106ed71bf82f87a72e810ead41f169d 221 SMART SM00530 9 63 1.3E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_02920 9106ed71bf82f87a72e810ead41f169d 221 SUPERFAMILY SSF51306 114 212 3.53E-15 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XFUD_02920 9106ed71bf82f87a72e810ead41f169d 221 Gene3D G3DSA:1.10.260.40 4 72 1.1E-16 T 11-10-2018 XFUD_02920 9106ed71bf82f87a72e810ead41f169d 221 Pfam PF01381 Helix-turn-helix 10 63 3.4E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_00485 3eaf7c8c6d73254854bfde2c24afadfd 563 Gene3D G3DSA:3.60.20.10 2 196 1.4E-63 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFUD_00485 3eaf7c8c6d73254854bfde2c24afadfd 563 Pfam PF13537 Glutamine amidotransferase domain 50 169 1.8E-40 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain XFUD_00485 3eaf7c8c6d73254854bfde2c24afadfd 563 SUPERFAMILY SSF52402 212 487 5.42E-73 T 11-10-2018 XFUD_00485 3eaf7c8c6d73254854bfde2c24afadfd 563 PIRSF PIRSF001589 366 523 3.5E-28 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 XFUD_00485 3eaf7c8c6d73254854bfde2c24afadfd 563 PIRSF PIRSF001589 1 371 1.5E-107 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 XFUD_00485 3eaf7c8c6d73254854bfde2c24afadfd 563 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 374 1.7E-106 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 XFUD_00485 3eaf7c8c6d73254854bfde2c24afadfd 563 SUPERFAMILY SSF56235 1 199 8.06E-57 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFUD_00485 3eaf7c8c6d73254854bfde2c24afadfd 563 Gene3D G3DSA:3.40.50.620 197 522 1.2E-105 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_00485 3eaf7c8c6d73254854bfde2c24afadfd 563 Pfam PF00733 Asparagine synthase 214 370 1.5E-55 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 XFUD_11280 bf706062158a0b16a226b36b51f12a00 586 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_11280 bf706062158a0b16a226b36b51f12a00 586 Pfam PF00005 ABC transporter 364 513 1.8E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_11280 bf706062158a0b16a226b36b51f12a00 586 SUPERFAMILY SSF90123 17 326 4.71E-69 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XFUD_11280 bf706062158a0b16a226b36b51f12a00 586 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 12 584 7.7E-277 T 11-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein XFUD_11280 bf706062158a0b16a226b36b51f12a00 586 SUPERFAMILY SSF52540 337 584 4.66E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11280 bf706062158a0b16a226b36b51f12a00 586 Pfam PF00664 ABC transporter transmembrane region 34 292 5.0E-51 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XFUD_11280 bf706062158a0b16a226b36b51f12a00 586 Gene3D G3DSA:1.20.1560.10 9 327 5.7E-76 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XFUD_11280 bf706062158a0b16a226b36b51f12a00 586 SMART SM00382 373 559 4.5E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_11280 bf706062158a0b16a226b36b51f12a00 586 Gene3D G3DSA:3.40.50.300 338 585 7.8E-92 T 11-10-2018 XFUD_00420 fe4854fe80b0c79f75e2eed56ecf1eac 376 Gene3D G3DSA:3.40.50.2000 188 353 5.0E-24 T 11-10-2018 XFUD_00420 fe4854fe80b0c79f75e2eed56ecf1eac 376 Gene3D G3DSA:3.40.50.2000 13 187 7.9E-23 T 11-10-2018 XFUD_00420 fe4854fe80b0c79f75e2eed56ecf1eac 376 SUPERFAMILY SSF53756 11 375 5.1E-56 T 11-10-2018 XFUD_00420 fe4854fe80b0c79f75e2eed56ecf1eac 376 Pfam PF00534 Glycosyl transferases group 1 198 346 1.2E-16 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 XFUD_00420 fe4854fe80b0c79f75e2eed56ecf1eac 376 Pfam PF13439 Glycosyltransferase Family 4 21 175 1.4E-22 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XFUD_10180 a5e213058d3e92907cb5e21a6f37f269 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 507 1.9E-21 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal XFUD_10180 a5e213058d3e92907cb5e21a6f37f269 557 Gene3D G3DSA:3.40.50.300 323 553 2.7E-43 T 11-10-2018 XFUD_10180 a5e213058d3e92907cb5e21a6f37f269 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 2.7E-148 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 XFUD_10180 a5e213058d3e92907cb5e21a6f37f269 557 SUPERFAMILY SSF52540 1 507 7.02E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_10180 a5e213058d3e92907cb5e21a6f37f269 557 PIRSF PIRSF003128 1 557 7.0E-149 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 XFUD_10180 a5e213058d3e92907cb5e21a6f37f269 557 Gene3D G3DSA:3.40.50.300 1 265 3.0E-46 T 11-10-2018 XFUD_01715 5a26d429c91016b2f88aabcad01d728e 584 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 262 4.6E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFUD_01715 5a26d429c91016b2f88aabcad01d728e 584 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 398 566 1.8E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFUD_01715 5a26d429c91016b2f88aabcad01d728e 584 SUPERFAMILY SSF161098 376 569 7.46E-20 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_01715 5a26d429c91016b2f88aabcad01d728e 584 Gene3D G3DSA:1.10.3720.10 368 573 2.6E-18 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_01715 5a26d429c91016b2f88aabcad01d728e 584 Gene3D G3DSA:1.10.3720.10 69 269 6.0E-24 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_01715 5a26d429c91016b2f88aabcad01d728e 584 SUPERFAMILY SSF161098 71 264 2.22E-20 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_07500 cff16ae6b754e5ef1284161785868099 237 SUPERFAMILY SSF53597 2 231 8.74E-31 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XFUD_07500 cff16ae6b754e5ef1284161785868099 237 Pfam PF01872 RibD C-terminal domain 4 192 2.2E-12 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 XFUD_07500 cff16ae6b754e5ef1284161785868099 237 Gene3D G3DSA:3.40.430.10 1 233 2.5E-31 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 XFUD_05450 f34457ae7c8c9a19e669744414e6339d 231 Gene3D G3DSA:3.90.550.10 3 231 9.4E-66 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_05450 f34457ae7c8c9a19e669744414e6339d 231 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 227 2.0E-59 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XFUD_05450 f34457ae7c8c9a19e669744414e6339d 231 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 103 110 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XFUD_05450 f34457ae7c8c9a19e669744414e6339d 231 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 227 39.903 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XFUD_05450 f34457ae7c8c9a19e669744414e6339d 231 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 226 2.5E-75 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 XFUD_05450 f34457ae7c8c9a19e669744414e6339d 231 SUPERFAMILY SSF53448 5 226 1.44E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_03650 b21d74c2d30eaf809182ce9cb16343b2 405 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 14 389 1.3E-173 T 11-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 XFUD_03650 b21d74c2d30eaf809182ce9cb16343b2 405 SUPERFAMILY SSF53383 18 389 1.9E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFUD_03650 b21d74c2d30eaf809182ce9cb16343b2 405 PIRSF PIRSF001434 4 392 3.0E-134 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XFUD_03650 b21d74c2d30eaf809182ce9cb16343b2 405 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XFUD_03650 b21d74c2d30eaf809182ce9cb16343b2 405 Gene3D G3DSA:3.40.640.10 10 255 3.1E-81 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFUD_03650 b21d74c2d30eaf809182ce9cb16343b2 405 Gene3D G3DSA:3.90.1150.10 256 393 5.5E-52 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFUD_03650 b21d74c2d30eaf809182ce9cb16343b2 405 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 388 9.1E-134 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 XFUD_00480 4265e0de84e06dd6662f078b09bcfa00 377 SUPERFAMILY SSF55031 179 286 2.09E-27 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain XFUD_00480 4265e0de84e06dd6662f078b09bcfa00 377 Gene3D G3DSA:3.30.70.360 179 292 1.4E-123 T 11-10-2018 XFUD_00480 4265e0de84e06dd6662f078b09bcfa00 377 SUPERFAMILY SSF53187 2 374 9.95E-64 T 11-10-2018 XFUD_00480 4265e0de84e06dd6662f078b09bcfa00 377 Gene3D G3DSA:3.40.630.10 7 362 1.4E-123 T 11-10-2018 XFUD_00480 4265e0de84e06dd6662f078b09bcfa00 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 49.409 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 XFUD_00480 4265e0de84e06dd6662f078b09bcfa00 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 135 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 XFUD_00480 4265e0de84e06dd6662f078b09bcfa00 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 2.8E-175 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 XFUD_00480 4265e0de84e06dd6662f078b09bcfa00 377 Pfam PF07687 Peptidase dimerisation domain 175 282 1.9E-24 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain XFUD_00480 4265e0de84e06dd6662f078b09bcfa00 377 Pfam PF01546 Peptidase family M20/M25/M40 63 371 2.8E-40 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 XFUD_10245 54727835052206c9759415d46a84db67 236 Gene3D G3DSA:1.20.120.160 138 236 8.6E-16 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFUD_10245 54727835052206c9759415d46a84db67 236 SMART SM00448 10 117 1.1E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_10245 54727835052206c9759415d46a84db67 236 Pfam PF00072 Response regulator receiver domain 13 118 1.7E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_10245 54727835052206c9759415d46a84db67 236 Gene3D G3DSA:3.40.50.2300 5 130 1.1E-19 T 11-10-2018 XFUD_10245 54727835052206c9759415d46a84db67 236 Pfam PF01627 Hpt domain 161 234 1.2E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 XFUD_10245 54727835052206c9759415d46a84db67 236 SUPERFAMILY SSF52172 10 129 1.1E-22 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_10245 54727835052206c9759415d46a84db67 236 SUPERFAMILY SSF47226 103 222 1.96E-12 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 XFUD_01620 d36c9dbc00b64caa60cbc2160baf2869 681 Gene3D G3DSA:2.170.130.10 64 182 8.7E-27 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFUD_01620 d36c9dbc00b64caa60cbc2160baf2869 681 Pfam PF00593 TonB dependent receptor 240 678 5.3E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFUD_01620 d36c9dbc00b64caa60cbc2160baf2869 681 SUPERFAMILY SSF56935 55 681 4.76E-83 T 11-10-2018 XFUD_01620 d36c9dbc00b64caa60cbc2160baf2869 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 173 2.2E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFUD_01620 d36c9dbc00b64caa60cbc2160baf2869 681 Gene3D G3DSA:2.40.170.20 188 681 3.2E-47 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XFUD_00825 2a839cd19687a287e398c307d2e6206d 118 SUPERFAMILY SSF55620 3 117 2.61E-39 T 11-10-2018 XFUD_00825 2a839cd19687a287e398c307d2e6206d 118 Gene3D G3DSA:3.30.479.10 1 118 9.8E-46 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 XFUD_00825 2a839cd19687a287e398c307d2e6206d 118 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 94 2.2E-32 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 XFUD_00825 2a839cd19687a287e398c307d2e6206d 118 PIRSF PIRSF006113 1 118 1.2E-48 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 XFUD_00825 2a839cd19687a287e398c307d2e6206d 118 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 116 6.3E-34 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 XFUD_00945 7aac9450955917e84a54558fd6197435 614 Pfam PF02355 Protein export membrane protein 435 600 1.9E-20 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial XFUD_00945 7aac9450955917e84a54558fd6197435 614 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 598 9.3E-121 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 XFUD_00945 7aac9450955917e84a54558fd6197435 614 Pfam PF07549 SecD/SecF GG Motif 115 140 6.9E-6 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site XFUD_00945 7aac9450955917e84a54558fd6197435 614 Gene3D G3DSA:3.30.1360.200 276 430 6.6E-41 T 11-10-2018 XFUD_00945 7aac9450955917e84a54558fd6197435 614 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 613 43.451 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 XFUD_00945 7aac9450955917e84a54558fd6197435 614 Gene3D G3DSA:1.20.1640.10 435 611 4.5E-15 T 11-10-2018 XFUD_00945 7aac9450955917e84a54558fd6197435 614 SUPERFAMILY SSF82866 407 606 6.93E-42 T 11-10-2018 XFUD_00945 7aac9450955917e84a54558fd6197435 614 Gene3D G3DSA:3.30.70.3400 217 434 6.6E-41 T 11-10-2018 XFUD_00945 7aac9450955917e84a54558fd6197435 614 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 391 592 3.7E-62 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial XFUD_00945 7aac9450955917e84a54558fd6197435 614 Pfam PF13721 SecD export protein N-terminal TM region 3 102 4.6E-30 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain XFUD_00945 7aac9450955917e84a54558fd6197435 614 Gene3D G3DSA:3.30.70.260 26 105 1.2E-5 T 11-10-2018 XFUD_04460 f73912eb903d479ab987a15866c42ea7 255 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 12 239 5.2E-84 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 XFUD_04460 f73912eb903d479ab987a15866c42ea7 255 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 239 8.7E-79 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 XFUD_04460 f73912eb903d479ab987a15866c42ea7 255 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 240 39.292 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 XFUD_04460 f73912eb903d479ab987a15866c42ea7 255 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 185 202 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 XFUD_04460 f73912eb903d479ab987a15866c42ea7 255 SUPERFAMILY SSF64005 11 235 2.75E-85 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 XFUD_04460 f73912eb903d479ab987a15866c42ea7 255 Gene3D G3DSA:3.40.1180.10 2 234 6.8E-91 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 XFUD_10495 105bda6d29d6bf98c9a77188677b4251 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_10495 105bda6d29d6bf98c9a77188677b4251 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_10495 105bda6d29d6bf98c9a77188677b4251 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.3E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_10495 105bda6d29d6bf98c9a77188677b4251 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.3E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_10495 105bda6d29d6bf98c9a77188677b4251 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.3E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_10495 105bda6d29d6bf98c9a77188677b4251 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.541 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_10495 105bda6d29d6bf98c9a77188677b4251 85 Gene3D G3DSA:2.40.50.100 21 85 1.0E-28 T 11-10-2018 XFUD_10495 105bda6d29d6bf98c9a77188677b4251 85 SUPERFAMILY SSF110324 2 81 2.48E-32 T 11-10-2018 XFUD_10495 105bda6d29d6bf98c9a77188677b4251 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.1E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_10495 105bda6d29d6bf98c9a77188677b4251 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.4E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04860 6182076c72b75ad6db53cf442b4908ea 101 SUPERFAMILY SSF81333 11 86 1.7E-17 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily XFUD_04860 6182076c72b75ad6db53cf442b4908ea 101 Hamap MF_01396 ATP synthase subunit c [atpH]. 17 82 13.656 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04860 6182076c72b75ad6db53cf442b4908ea 101 Pfam PF00137 ATP synthase subunit C 18 81 3.7E-8 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 XFUD_04860 6182076c72b75ad6db53cf442b4908ea 101 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 27 84 8.3E-23 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 XFUD_04860 6182076c72b75ad6db53cf442b4908ea 101 PRINTS PR00124 ATP synthase C subunit signature 57 82 5.1E-5 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04860 6182076c72b75ad6db53cf442b4908ea 101 PRINTS PR00124 ATP synthase C subunit signature 19 38 5.1E-5 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04860 6182076c72b75ad6db53cf442b4908ea 101 PRINTS PR00124 ATP synthase C subunit signature 40 55 5.1E-5 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04860 6182076c72b75ad6db53cf442b4908ea 101 ProSitePatterns PS00605 ATP synthase c subunit signature. 47 68 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04860 6182076c72b75ad6db53cf442b4908ea 101 Gene3D G3DSA:1.20.20.10 10 85 4.0E-24 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_01635 2da83a69f250e0580df40d1afd5853b9 227 Gene3D G3DSA:1.10.10.10 123 227 1.0E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_01635 2da83a69f250e0580df40d1afd5853b9 227 SMART SM00862 145 220 3.4E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFUD_01635 2da83a69f250e0580df40d1afd5853b9 227 Pfam PF00072 Response regulator receiver domain 3 113 2.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_01635 2da83a69f250e0580df40d1afd5853b9 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 4.3E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFUD_01635 2da83a69f250e0580df40d1afd5853b9 227 SMART SM00448 1 112 3.2E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_01635 2da83a69f250e0580df40d1afd5853b9 227 Gene3D G3DSA:3.40.50.2300 1 121 6.4E-40 T 11-10-2018 XFUD_01635 2da83a69f250e0580df40d1afd5853b9 227 SUPERFAMILY SSF52172 1 169 2.11E-38 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_05875 6e3c14a8cdaa6807113b6d39032c86ab 163 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 156 4.4E-21 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain XFUD_05875 6e3c14a8cdaa6807113b6d39032c86ab 163 ProSitePatterns PS00935 Glyoxalase I signature 2. 100 116 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 XFUD_05875 6e3c14a8cdaa6807113b6d39032c86ab 163 Gene3D G3DSA:3.10.180.10 1 160 1.9E-57 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XFUD_05875 6e3c14a8cdaa6807113b6d39032c86ab 163 SUPERFAMILY SSF54593 10 161 1.88E-32 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase XFUD_05875 6e3c14a8cdaa6807113b6d39032c86ab 163 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 7 160 6.2E-45 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 XFUD_05875 6e3c14a8cdaa6807113b6d39032c86ab 163 ProSitePatterns PS00934 Glyoxalase I signature 1. 15 36 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 XFUD_09995 fdc2ca3e9fe34b6475f8f03b5834a00e 284 SUPERFAMILY SSF52540 16 250 2.23E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_09995 fdc2ca3e9fe34b6475f8f03b5834a00e 284 Hamap MF_02040 Iron-sulfur cluster carrier protein. 15 266 36.983 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein XFUD_09995 fdc2ca3e9fe34b6475f8f03b5834a00e 284 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 23 263 3.0E-100 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 XFUD_09995 fdc2ca3e9fe34b6475f8f03b5834a00e 284 Gene3D G3DSA:3.40.50.300 15 261 2.6E-82 T 11-10-2018 XFUD_09995 fdc2ca3e9fe34b6475f8f03b5834a00e 284 ProSitePatterns PS01215 Mrp family signature. 129 145 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 XFUD_06425 a86be27b8e2c6dbb070ea2e470ab9518 168 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 42 8.9E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_06425 a86be27b8e2c6dbb070ea2e470ab9518 168 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 21 41 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_06425 a86be27b8e2c6dbb070ea2e470ab9518 168 SUPERFAMILY SSF54523 24 110 3.3E-7 T 11-10-2018 XFUD_03920 33eeb5a91ebcce3f4cfa9ddf8e220847 126 SUPERFAMILY SSF47413 8 62 2.69E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_03920 33eeb5a91ebcce3f4cfa9ddf8e220847 126 Gene3D G3DSA:1.10.260.40 6 75 2.9E-12 T 11-10-2018 XFUD_03920 33eeb5a91ebcce3f4cfa9ddf8e220847 126 SMART SM00530 12 71 4.5E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_03920 33eeb5a91ebcce3f4cfa9ddf8e220847 126 Pfam PF01381 Helix-turn-helix 13 66 1.9E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_05695 0e909d2b3c3ae32e0fef32de630808fe 145 Pfam PF01047 MarR family 38 92 8.6E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_05695 0e909d2b3c3ae32e0fef32de630808fe 145 SUPERFAMILY SSF46785 10 143 8.37E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_05695 0e909d2b3c3ae32e0fef32de630808fe 145 SMART SM00347 28 128 2.6E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_05695 0e909d2b3c3ae32e0fef32de630808fe 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 6.3E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_05695 0e909d2b3c3ae32e0fef32de630808fe 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 6.3E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_05695 0e909d2b3c3ae32e0fef32de630808fe 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 6.3E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_05695 0e909d2b3c3ae32e0fef32de630808fe 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 6.3E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_05695 0e909d2b3c3ae32e0fef32de630808fe 145 Gene3D G3DSA:1.10.10.10 2 143 1.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_11025 1e208a12bf3bdc407dd33c77724c2903 131 Gene3D G3DSA:3.90.20.10 4 120 1.2E-8 T 11-10-2018 XFUD_04745 1754963916764965ff7304c6b959623a 320 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XFUD_04745 1754963916764965ff7304c6b959623a 320 SUPERFAMILY SSF51391 118 314 1.18E-49 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XFUD_04745 1754963916764965ff7304c6b959623a 320 SUPERFAMILY SSF55811 8 131 1.49E-32 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XFUD_04745 1754963916764965ff7304c6b959623a 320 Pfam PF02581 Thiamine monophosphate synthase 136 312 4.6E-44 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XFUD_04745 1754963916764965ff7304c6b959623a 320 Gene3D G3DSA:3.20.20.70 133 318 9.9E-49 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_04745 1754963916764965ff7304c6b959623a 320 PRINTS PR00502 NUDIX hydrolase family signature 51 66 1.2E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XFUD_04745 1754963916764965ff7304c6b959623a 320 PRINTS PR00502 NUDIX hydrolase family signature 37 51 1.2E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 XFUD_04745 1754963916764965ff7304c6b959623a 320 Gene3D G3DSA:3.90.79.10 2 132 1.8E-32 T 11-10-2018 XFUD_04745 1754963916764965ff7304c6b959623a 320 Pfam PF00293 NUDIX domain 11 125 2.1E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XFUD_04825 04033bf4fd517362a70d6402d11813a4 191 SMART SM00830 30 109 2.1E-12 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFUD_04825 04033bf4fd517362a70d6402d11813a4 191 PIRSF PIRSF026640 4 191 1.1E-69 T 11-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFUD_04825 04033bf4fd517362a70d6402d11813a4 191 SUPERFAMILY SSF48600 37 190 1.5E-40 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFUD_04825 04033bf4fd517362a70d6402d11813a4 191 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 34 145 1.3E-33 T 11-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFUD_04825 04033bf4fd517362a70d6402d11813a4 191 Pfam PF01817 Chorismate mutase type II 39 107 3.2E-7 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 XFUD_04825 04033bf4fd517362a70d6402d11813a4 191 Gene3D G3DSA:1.20.1250.110 24 191 1.7E-52 T 11-10-2018 XFUD_01965 565f775eb4b14ee5ff7d2b815743eb0e 418 Pfam PF16074 Type IV Pilus-assembly protein W 278 413 2.1E-23 T 11-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 XFUD_12160 ad226b2639911e4d6ccb4f9d282ae706 191 Pfam PF01464 Transglycosylase SLT domain 6 145 1.1E-19 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 XFUD_12160 ad226b2639911e4d6ccb4f9d282ae706 191 SUPERFAMILY SSF53955 16 149 1.55E-15 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_12160 ad226b2639911e4d6ccb4f9d282ae706 191 Gene3D G3DSA:1.10.530.10 12 162 4.3E-13 T 11-10-2018 XFUD_11725 671fbef60b1014c8e6aec6d1a03dcc1e 113 PRINTS PR00421 Thioredoxin family signature 72 83 3.2E-5 T 11-10-2018 XFUD_11725 671fbef60b1014c8e6aec6d1a03dcc1e 113 PRINTS PR00421 Thioredoxin family signature 32 41 3.2E-5 T 11-10-2018 XFUD_11725 671fbef60b1014c8e6aec6d1a03dcc1e 113 PRINTS PR00421 Thioredoxin family signature 24 32 3.2E-5 T 11-10-2018 XFUD_11725 671fbef60b1014c8e6aec6d1a03dcc1e 113 Pfam PF00085 Thioredoxin 5 106 3.7E-28 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 XFUD_11725 671fbef60b1014c8e6aec6d1a03dcc1e 113 SUPERFAMILY SSF52833 3 109 1.3E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_11725 671fbef60b1014c8e6aec6d1a03dcc1e 113 Gene3D G3DSA:3.40.30.10 4 112 1.0E-30 T 11-10-2018 XFUD_11725 671fbef60b1014c8e6aec6d1a03dcc1e 113 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.7E-33 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 XFUD_11725 671fbef60b1014c8e6aec6d1a03dcc1e 113 PIRSF PIRSF000077 2 108 2.9E-36 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 XFUD_00325 e7d367798bca856ba8f8c93b5439d9d8 326 Pfam PF00419 Fimbrial protein 173 326 8.3E-20 T 11-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 XFUD_00325 e7d367798bca856ba8f8c93b5439d9d8 326 Gene3D G3DSA:2.60.40.3310 9 178 8.2E-41 T 11-10-2018 XFUD_00325 e7d367798bca856ba8f8c93b5439d9d8 326 SUPERFAMILY SSF49401 174 326 8.45E-27 T 11-10-2018 IPR008966 Adhesion domain superfamily XFUD_00325 e7d367798bca856ba8f8c93b5439d9d8 326 Gene3D G3DSA:2.60.40.1090 179 326 2.8E-32 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XFUD_00050 020b849994fb8e8f3212daf69d560f5d 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 115 236 3.3E-36 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 153 225 3.6E-15 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 Gene3D G3DSA:1.10.274.10 24 147 1.3E-54 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 448 463 2.7E-26 T 11-10-2018 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 465 480 2.7E-26 T 11-10-2018 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 501 513 2.7E-26 T 11-10-2018 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.7E-26 T 11-10-2018 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 127 5.2E-21 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 Gene3D G3DSA:3.20.20.60 234 573 2.5E-108 T 11-10-2018 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 448 466 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 541 5.9E-96 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 SUPERFAMILY SSF47831 28 142 2.75E-25 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 PIRSF PIRSF000732 1 575 8.1E-196 T 11-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 SUPERFAMILY SSF52009 114 233 7.59E-25 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 SUPERFAMILY SSF51621 249 548 2.62E-92 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 Gene3D G3DSA:3.50.30.10 7 233 1.3E-54 T 11-10-2018 XFUD_05890 af9759581cceeed81e42bf6eb6052867 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 563 2.3E-140 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 XFUD_02485 91bbbcbb676b5b3fe92a49c831465fce 267 Pfam PF10670 Domain of unknown function (DUF4198) 18 242 1.6E-64 T 11-10-2018 IPR019613 Protein of unknown function DUF4198 XFUD_02315 b42392cca9e8c8a1f3304c37c614f8c4 1041 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 193 7.2E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFUD_02315 b42392cca9e8c8a1f3304c37c614f8c4 1041 Pfam PF00593 TonB dependent receptor 461 1039 5.7E-31 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFUD_02315 b42392cca9e8c8a1f3304c37c614f8c4 1041 SUPERFAMILY SSF56935 60 1040 1.74E-65 T 11-10-2018 XFUD_02315 b42392cca9e8c8a1f3304c37c614f8c4 1041 Gene3D G3DSA:2.170.130.10 53 197 4.8E-25 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFUD_05295 66be2dbd128f53ab902a18c24c3d2277 1641 Pfam PF01835 MG2 domain 386 473 6.4E-20 T 11-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 XFUD_05295 66be2dbd128f53ab902a18c24c3d2277 1641 SUPERFAMILY SSF48239 1156 1413 1.1E-25 T 11-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid XFUD_05295 66be2dbd128f53ab902a18c24c3d2277 1641 SMART SM01359 747 890 2.4E-33 T 11-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 XFUD_05295 66be2dbd128f53ab902a18c24c3d2277 1641 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 748 890 3.1E-14 T 11-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 XFUD_05295 66be2dbd128f53ab902a18c24c3d2277 1641 Pfam PF00207 Alpha-2-macroglobulin family 957 1042 2.0E-8 T 11-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 XFUD_05295 66be2dbd128f53ab902a18c24c3d2277 1641 Gene3D G3DSA:1.50.10.20 1151 1417 1.8E-14 T 11-10-2018 XFUD_05295 66be2dbd128f53ab902a18c24c3d2277 1641 SMART SM01360 954 1043 6.9E-23 T 11-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 XFUD_05295 66be2dbd128f53ab902a18c24c3d2277 1641 Gene3D G3DSA:2.60.40.1930 386 485 7.9E-7 T 11-10-2018 XFUD_05295 66be2dbd128f53ab902a18c24c3d2277 1641 PIRSF PIRSF038980 33 1640 0.0 T 11-10-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria XFUD_05295 66be2dbd128f53ab902a18c24c3d2277 1641 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 286 380 1.5E-21 T 11-10-2018 XFUD_02145 82fec45df7172f562702ab32d31cb6b9 769 PRINTS PR00127 Clp protease catalytic subunit P signature 126 145 1.7E-8 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFUD_02145 82fec45df7172f562702ab32d31cb6b9 769 PRINTS PR00127 Clp protease catalytic subunit P signature 76 96 1.7E-8 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFUD_02145 82fec45df7172f562702ab32d31cb6b9 769 PRINTS PR00127 Clp protease catalytic subunit P signature 184 203 1.7E-8 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 XFUD_02145 82fec45df7172f562702ab32d31cb6b9 769 SUPERFAMILY SSF52096 35 208 8.7E-37 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFUD_02145 82fec45df7172f562702ab32d31cb6b9 769 Pfam PF00574 Clp protease 61 207 7.9E-26 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA XFUD_02145 82fec45df7172f562702ab32d31cb6b9 769 Gene3D G3DSA:3.90.226.10 33 213 4.8E-40 T 11-10-2018 XFUD_02800 e4f12309a51bd3b3926974bf97268ea6 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site XFUD_02800 e4f12309a51bd3b3926974bf97268ea6 79 Pfam PF00550 Phosphopantetheine attachment site 7 73 3.7E-14 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain XFUD_02800 e4f12309a51bd3b3926974bf97268ea6 79 Gene3D G3DSA:1.10.1200.10 1 78 2.7E-27 T 11-10-2018 IPR036736 ACP-like superfamily XFUD_02800 e4f12309a51bd3b3926974bf97268ea6 79 SUPERFAMILY SSF47336 1 76 1.2E-20 T 11-10-2018 IPR036736 ACP-like superfamily XFUD_02800 e4f12309a51bd3b3926974bf97268ea6 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 4.0E-32 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 XFUD_02800 e4f12309a51bd3b3926974bf97268ea6 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 73 3.0E-12 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 XFUD_02800 e4f12309a51bd3b3926974bf97268ea6 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.103 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 XFUD_07890 3dbe9ffa1e6b324a3b839d4e42609504 583 SUPERFAMILY SSF52518 8 178 1.13E-59 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFUD_07890 3dbe9ffa1e6b324a3b839d4e42609504 583 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 332 3.7E-41 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 XFUD_07890 3dbe9ffa1e6b324a3b839d4e42609504 583 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 568 1.4E-207 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 XFUD_07890 3dbe9ffa1e6b324a3b839d4e42609504 583 Gene3D G3DSA:3.40.50.970 367 579 1.5E-65 T 11-10-2018 XFUD_07890 3dbe9ffa1e6b324a3b839d4e42609504 583 SUPERFAMILY SSF52467 193 362 1.11E-53 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily XFUD_07890 3dbe9ffa1e6b324a3b839d4e42609504 583 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 544 1.6E-47 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 XFUD_07890 3dbe9ffa1e6b324a3b839d4e42609504 583 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 XFUD_07890 3dbe9ffa1e6b324a3b839d4e42609504 583 Gene3D G3DSA:3.40.50.1220 191 363 3.8E-50 T 11-10-2018 XFUD_07890 3dbe9ffa1e6b324a3b839d4e42609504 583 Gene3D G3DSA:3.40.50.970 2 185 5.1E-68 T 11-10-2018 XFUD_07890 3dbe9ffa1e6b324a3b839d4e42609504 583 SUPERFAMILY SSF52518 377 573 8.94E-64 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold XFUD_07890 3dbe9ffa1e6b324a3b839d4e42609504 583 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 175 4.0E-57 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 XFUD_09045 a175fe04d750387547f4f3b2b216bc4c 86 Gene3D G3DSA:1.10.1220.10 5 78 1.1E-14 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XFUD_09045 a175fe04d750387547f4f3b2b216bc4c 86 Pfam PF04221 RelB antitoxin 4 83 9.2E-30 T 11-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ XFUD_09045 a175fe04d750387547f4f3b2b216bc4c 86 PIRSF PIRSF003108 1 86 5.6E-29 T 11-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 XFUD_09045 a175fe04d750387547f4f3b2b216bc4c 86 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 68 2.3E-20 T 11-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ XFUD_05405 72e16bd09d4bb8873ab262495ac70a54 503 ProSitePatterns PS00131 Serine carboxypeptidases, serine active site. 204 211 - T 11-10-2018 IPR018202 Serine carboxypeptidase, serine active site XFUD_05405 72e16bd09d4bb8873ab262495ac70a54 503 Pfam PF00450 Serine carboxypeptidase 91 464 9.4E-21 T 11-10-2018 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 XFUD_05405 72e16bd09d4bb8873ab262495ac70a54 503 SUPERFAMILY SSF53474 52 483 9.07E-71 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_11915 c4295bad2d754d1b32a7b46703ab8af1 519 Pfam PF02384 N-6 DNA Methylase 157 478 3.4E-113 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 XFUD_11915 c4295bad2d754d1b32a7b46703ab8af1 519 Pfam PF12161 HsdM N-terminal domain 19 135 9.2E-25 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain XFUD_11915 c4295bad2d754d1b32a7b46703ab8af1 519 Gene3D G3DSA:3.40.50.150 158 462 4.4E-118 T 11-10-2018 XFUD_11915 c4295bad2d754d1b32a7b46703ab8af1 519 SUPERFAMILY SSF53335 19 518 5.68E-139 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_11915 c4295bad2d754d1b32a7b46703ab8af1 519 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 281 287 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XFUD_11915 c4295bad2d754d1b32a7b46703ab8af1 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 181 197 3.0E-20 T 11-10-2018 XFUD_11915 c4295bad2d754d1b32a7b46703ab8af1 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 278 290 3.0E-20 T 11-10-2018 XFUD_11915 c4295bad2d754d1b32a7b46703ab8af1 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 204 218 3.0E-20 T 11-10-2018 XFUD_11915 c4295bad2d754d1b32a7b46703ab8af1 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 312 336 3.0E-20 T 11-10-2018 XFUD_11915 c4295bad2d754d1b32a7b46703ab8af1 519 Gene3D G3DSA:1.20.1260.30 15 148 2.4E-43 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily XFUD_01170 c800cef7af1df02198ebdecfeb03ee63 471 Gene3D G3DSA:3.40.1190.10 92 335 1.5E-59 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFUD_01170 c800cef7af1df02198ebdecfeb03ee63 471 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 2 471 54.287 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 XFUD_01170 c800cef7af1df02198ebdecfeb03ee63 471 Pfam PF08245 Mur ligase middle domain 109 313 6.3E-24 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XFUD_01170 c800cef7af1df02198ebdecfeb03ee63 471 SUPERFAMILY SSF53244 333 469 2.09E-32 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFUD_01170 c800cef7af1df02198ebdecfeb03ee63 471 SUPERFAMILY SSF53623 96 330 6.8E-51 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFUD_01170 c800cef7af1df02198ebdecfeb03ee63 471 Gene3D G3DSA:3.40.50.720 1 91 1.9E-27 T 11-10-2018 XFUD_01170 c800cef7af1df02198ebdecfeb03ee63 471 Gene3D G3DSA:3.90.190.20 336 471 2.0E-25 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFUD_01170 c800cef7af1df02198ebdecfeb03ee63 471 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 3 471 1.2E-179 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 XFUD_01170 c800cef7af1df02198ebdecfeb03ee63 471 Pfam PF01225 Mur ligase family, catalytic domain 4 98 6.8E-12 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XFUD_01170 c800cef7af1df02198ebdecfeb03ee63 471 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 402 3.9E-9 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XFUD_01170 c800cef7af1df02198ebdecfeb03ee63 471 SUPERFAMILY SSF51984 2 91 9.03E-16 T 11-10-2018 XFUD_04175 31247a4b7ef7e96879a193eb67a6eeee 389 Pfam PF07396 Phosphate-selective porin O and P 41 389 7.1E-98 T 11-10-2018 IPR010870 Phosphate-selective porin O/P XFUD_04175 31247a4b7ef7e96879a193eb67a6eeee 389 SUPERFAMILY SSF56935 43 381 3.05E-10 T 11-10-2018 XFUD_04175 31247a4b7ef7e96879a193eb67a6eeee 389 Gene3D G3DSA:2.40.160.10 31 389 5.4E-73 T 11-10-2018 IPR023614 Porin domain superfamily XFUD_08485 fa1f999fe536d3d7d35fd6ce3d064780 314 Gene3D G3DSA:3.30.1490.20 138 202 7.1E-105 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XFUD_08485 fa1f999fe536d3d7d35fd6ce3d064780 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 312 2.4E-145 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XFUD_08485 fa1f999fe536d3d7d35fd6ce3d064780 314 SUPERFAMILY SSF56059 124 311 6.06E-51 T 11-10-2018 XFUD_08485 fa1f999fe536d3d7d35fd6ce3d064780 314 Gene3D G3DSA:3.30.470.20 116 296 7.1E-105 T 11-10-2018 XFUD_08485 fa1f999fe536d3d7d35fd6ce3d064780 314 SUPERFAMILY SSF52440 3 122 2.65E-36 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XFUD_08485 fa1f999fe536d3d7d35fd6ce3d064780 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 145.837 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XFUD_08485 fa1f999fe536d3d7d35fd6ce3d064780 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 3.0E-37 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XFUD_08485 fa1f999fe536d3d7d35fd6ce3d064780 314 Gene3D G3DSA:3.40.50.20 8 115 7.1E-105 T 11-10-2018 XFUD_08485 fa1f999fe536d3d7d35fd6ce3d064780 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 7.8E-73 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 XFUD_06315 53dbb4b601d7764270b5af08eeb469ed 237 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 40 212 8.0E-53 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 XFUD_06315 53dbb4b601d7764270b5af08eeb469ed 237 SUPERFAMILY SSF52402 13 200 8.7E-58 T 11-10-2018 XFUD_06315 53dbb4b601d7764270b5af08eeb469ed 237 PIRSF PIRSF000857 8 237 3.2E-59 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 XFUD_06315 53dbb4b601d7764270b5af08eeb469ed 237 Gene3D G3DSA:3.40.50.620 9 237 7.0E-67 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_06315 53dbb4b601d7764270b5af08eeb469ed 237 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 1 235 39.788 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 XFUD_06315 53dbb4b601d7764270b5af08eeb469ed 237 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 25 235 1.2E-80 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 XFUD_06315 53dbb4b601d7764270b5af08eeb469ed 237 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 13 234 2.0E-83 T 11-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 XFUD_04840 c1296956287eb8cabcd89cb69ffd2ecf 287 Pfam PF00231 ATP synthase 5 286 3.0E-93 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04840 c1296956287eb8cabcd89cb69ffd2ecf 287 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 7.5E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04840 c1296956287eb8cabcd89cb69ffd2ecf 287 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 7.5E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04840 c1296956287eb8cabcd89cb69ffd2ecf 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 7.5E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04840 c1296956287eb8cabcd89cb69ffd2ecf 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 7.5E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04840 c1296956287eb8cabcd89cb69ffd2ecf 287 Gene3D G3DSA:1.10.287.80 6 283 1.0E-105 T 11-10-2018 XFUD_04840 c1296956287eb8cabcd89cb69ffd2ecf 287 Gene3D G3DSA:3.40.1380.10 61 206 1.0E-105 T 11-10-2018 XFUD_04840 c1296956287eb8cabcd89cb69ffd2ecf 287 SUPERFAMILY SSF52943 2 287 1.83E-91 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04840 c1296956287eb8cabcd89cb69ffd2ecf 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 35.747 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04840 c1296956287eb8cabcd89cb69ffd2ecf 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 3.0E-104 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04840 c1296956287eb8cabcd89cb69ffd2ecf 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_03915 e6f03bf8299d5dc76d4ab7498087e8d0 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XFUD_03915 e6f03bf8299d5dc76d4ab7498087e8d0 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_03915 e6f03bf8299d5dc76d4ab7498087e8d0 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_03915 e6f03bf8299d5dc76d4ab7498087e8d0 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_03915 e6f03bf8299d5dc76d4ab7498087e8d0 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_03915 e6f03bf8299d5dc76d4ab7498087e8d0 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_03915 e6f03bf8299d5dc76d4ab7498087e8d0 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_03915 e6f03bf8299d5dc76d4ab7498087e8d0 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.7E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_03915 e6f03bf8299d5dc76d4ab7498087e8d0 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.7E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_03915 e6f03bf8299d5dc76d4ab7498087e8d0 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 1.7E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_03915 e6f03bf8299d5dc76d4ab7498087e8d0 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 3.2E-60 T 11-10-2018 XFUD_03915 e6f03bf8299d5dc76d4ab7498087e8d0 258 SUPERFAMILY SSF51735 9 255 9.01E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_03915 e6f03bf8299d5dc76d4ab7498087e8d0 258 Gene3D G3DSA:3.40.50.720 1 256 1.2E-79 T 11-10-2018 XFUD_00680 cca3fd3336a6fbbb3ce070a0060c6819 509 Pfam PF13000 Acetyl-coenzyme A transporter 1 22 107 6.4E-10 T 11-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 XFUD_00680 cca3fd3336a6fbbb3ce070a0060c6819 509 Gene3D G3DSA:1.20.1250.20 17 207 3.9E-8 T 11-10-2018 XFUD_00680 cca3fd3336a6fbbb3ce070a0060c6819 509 SUPERFAMILY SSF103473 18 500 8.2E-22 T 11-10-2018 IPR036259 MFS transporter superfamily XFUD_00680 cca3fd3336a6fbbb3ce070a0060c6819 509 Gene3D G3DSA:1.20.1250.20 284 501 1.6E-7 T 11-10-2018 XFUD_01345 0955a3ccb4981e3571d0e39e9719f811 444 SUPERFAMILY SSF142984 255 338 2.62E-21 T 11-10-2018 XFUD_01345 0955a3ccb4981e3571d0e39e9719f811 444 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01345 0955a3ccb4981e3571d0e39e9719f811 444 Gene3D G3DSA:1.20.1440.230 342 441 2.4E-33 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01345 0955a3ccb4981e3571d0e39e9719f811 444 SUPERFAMILY SSF140490 339 436 1.28E-34 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01345 0955a3ccb4981e3571d0e39e9719f811 444 SUPERFAMILY SSF142019 20 252 8.11E-79 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01345 0955a3ccb4981e3571d0e39e9719f811 444 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 62 233 3.4E-44 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01345 0955a3ccb4981e3571d0e39e9719f811 444 Gene3D G3DSA:3.40.50.11540 67 245 1.4E-73 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01345 0955a3ccb4981e3571d0e39e9719f811 444 Pfam PF10531 SLBB domain 257 305 1.5E-10 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01345 0955a3ccb4981e3571d0e39e9719f811 444 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 429 1.9E-194 T 11-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01345 0955a3ccb4981e3571d0e39e9719f811 444 SMART SM00928 343 388 3.1E-26 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01345 0955a3ccb4981e3571d0e39e9719f811 444 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 356 367 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01345 0955a3ccb4981e3571d0e39e9719f811 444 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 346 426 1.8E-29 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01345 0955a3ccb4981e3571d0e39e9719f811 444 Gene3D G3DSA:3.10.20.600 247 340 4.5E-27 T 11-10-2018 XFUD_05430 b31bb65d4a58a3c69119d496eb4b4715 554 Pfam PF06418 CTP synthase N-terminus 5 265 2.2E-121 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 XFUD_05430 b31bb65d4a58a3c69119d496eb4b4715 554 Pfam PF00117 Glutamine amidotransferase class-I 303 538 7.3E-53 T 11-10-2018 IPR017926 Glutamine amidotransferase XFUD_05430 b31bb65d4a58a3c69119d496eb4b4715 554 Hamap MF_01227 CTP synthase [pyrG]. 2 543 51.252 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 XFUD_05430 b31bb65d4a58a3c69119d496eb4b4715 554 Gene3D G3DSA:3.40.50.880 288 546 4.5E-96 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_05430 b31bb65d4a58a3c69119d496eb4b4715 554 SUPERFAMILY SSF52317 290 543 1.36E-79 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_05430 b31bb65d4a58a3c69119d496eb4b4715 554 Gene3D G3DSA:3.40.50.300 1 285 1.2E-123 T 11-10-2018 XFUD_05430 b31bb65d4a58a3c69119d496eb4b4715 554 TIGRFAM TIGR00337 PyrG: CTP synthase 4 538 5.3E-238 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 XFUD_05430 b31bb65d4a58a3c69119d496eb4b4715 554 SUPERFAMILY SSF52540 2 266 3.8E-118 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_07885 eac98691ed9e95f96692c83b0d3bde00 81 SUPERFAMILY SSF55021 1 75 1.49E-5 T 11-10-2018 XFUD_07885 eac98691ed9e95f96692c83b0d3bde00 81 Pfam PF13710 ACT domain 12 73 2.9E-20 T 11-10-2018 XFUD_03945 d22c79dad3d0980598128a148d7e0541 187 Gene3D G3DSA:3.90.870.10 2 186 8.9E-52 T 11-10-2018 XFUD_03945 d22c79dad3d0980598128a148d7e0541 187 Pfam PF01300 Telomere recombination 13 185 1.1E-39 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 XFUD_03945 d22c79dad3d0980598128a148d7e0541 187 SUPERFAMILY SSF55821 7 185 4.58E-49 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily XFUD_03945 d22c79dad3d0980598128a148d7e0541 187 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 186 38.056 T 11-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 XFUD_06330 e25147ad1aa1c94b6715595df0454048 304 SUPERFAMILY SSF52402 6 212 1.35E-69 T 11-10-2018 XFUD_06330 e25147ad1aa1c94b6715595df0454048 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 259 3.2E-59 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 XFUD_06330 e25147ad1aa1c94b6715595df0454048 304 PIRSF PIRSF002936 2 304 5.6E-147 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XFUD_06330 e25147ad1aa1c94b6715595df0454048 304 Gene3D G3DSA:3.40.50.620 9 214 1.8E-60 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_06330 e25147ad1aa1c94b6715595df0454048 304 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 6 304 55.226 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XFUD_06330 e25147ad1aa1c94b6715595df0454048 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 11 304 1.7E-149 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XFUD_08635 42fd1ff630444d8d86c925a62dab4cba 344 PIRSF PIRSF028458 1 344 1.2E-187 T 11-10-2018 IPR016886 Predicted glycerophosphotransferase UCP028458 XFUD_08635 42fd1ff630444d8d86c925a62dab4cba 344 Gene3D G3DSA:3.40.50.12580 139 251 6.3E-6 T 11-10-2018 XFUD_08635 42fd1ff630444d8d86c925a62dab4cba 344 SUPERFAMILY SSF53756 13 310 7.53E-29 T 11-10-2018 XFUD_06895 6bd61d8279ac258029fb96e1097ed72c 251 Gene3D G3DSA:2.40.50.40 136 202 1.9E-9 T 11-10-2018 XFUD_06895 6bd61d8279ac258029fb96e1097ed72c 251 SMART SM00850 145 242 9.7E-24 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 XFUD_06895 6bd61d8279ac258029fb96e1097ed72c 251 Pfam PF04397 LytTr DNA-binding domain 147 241 5.9E-22 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 XFUD_06895 6bd61d8279ac258029fb96e1097ed72c 251 SUPERFAMILY SSF52172 1 119 6.55E-33 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_06895 6bd61d8279ac258029fb96e1097ed72c 251 SMART SM00448 1 113 7.1E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_06895 6bd61d8279ac258029fb96e1097ed72c 251 Pfam PF00072 Response regulator receiver domain 3 113 1.3E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_06895 6bd61d8279ac258029fb96e1097ed72c 251 Gene3D G3DSA:3.40.50.2300 1 123 3.9E-34 T 11-10-2018 XFUD_09295 d85d39d5fbae440f7fc2d268099b8a13 324 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 25 317 5.8E-91 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 XFUD_09295 d85d39d5fbae440f7fc2d268099b8a13 324 SUPERFAMILY SSF161098 31 311 3.83E-34 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_09295 d85d39d5fbae440f7fc2d268099b8a13 324 Gene3D G3DSA:1.10.3720.10 77 322 1.4E-34 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_09295 d85d39d5fbae440f7fc2d268099b8a13 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 311 9.4E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 SUPERFAMILY SSF50715 364 575 1.78E-68 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 35 578 2.0E-198 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:2.40.240.10 364 574 2.6E-70 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 364 556 4.8E-53 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 SUPERFAMILY SSF52374 19 362 4.74E-89 T 11-10-2018 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:3.90.800.10 107 215 2.7E-95 T 11-10-2018 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:1.10.1160.10 285 363 9.0E-34 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 277 361 2.7E-16 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 35 261 1.6E-77 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 6 577 52.1 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 226 5.8E-9 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 50 5.8E-9 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 PRINTS PR00987 Glutamyl-tRNA synthetase signature 67 80 5.8E-9 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:2.40.240.10 372 490 2.6E-70 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 XFUD_05640 9804f901c78f293a96965db6cdc70caa 580 Gene3D G3DSA:3.40.50.620 36 253 2.7E-95 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_04765 ec619ab104b0c57342af84a1426a4d27 497 Pfam PF10150 Ribonuclease E/G family 130 401 1.5E-98 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 XFUD_04765 ec619ab104b0c57342af84a1426a4d27 497 Pfam PF00575 S1 RNA binding domain 38 125 3.5E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 XFUD_04765 ec619ab104b0c57342af84a1426a4d27 497 SUPERFAMILY SSF50249 39 134 2.29E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_04765 ec619ab104b0c57342af84a1426a4d27 497 SMART SM00316 37 128 3.3E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 XFUD_04765 ec619ab104b0c57342af84a1426a4d27 497 Gene3D G3DSA:2.40.50.140 33 133 4.5E-30 T 11-10-2018 XFUD_04765 ec619ab104b0c57342af84a1426a4d27 497 Gene3D G3DSA:3.40.1260.20 410 497 2.9E-6 T 11-10-2018 XFUD_04765 ec619ab104b0c57342af84a1426a4d27 497 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 434 9.2E-150 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 XFUD_08630 056ac7e611b0f2126595ad30d461efde 398 PIRSF PIRSF001259 1 375 7.5E-106 T 11-10-2018 XFUD_08630 056ac7e611b0f2126595ad30d461efde 398 SUPERFAMILY SSF142695 186 342 3.27E-46 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XFUD_08630 056ac7e611b0f2126595ad30d461efde 398 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 171 367 39.31 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XFUD_08630 056ac7e611b0f2126595ad30d461efde 398 Pfam PF00925 GTP cyclohydrolase II 178 341 3.6E-49 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XFUD_08630 056ac7e611b0f2126595ad30d461efde 398 Gene3D G3DSA:3.40.50.10990 173 344 4.5E-55 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 XFUD_05300 928ef0239d305d75404ea71fff26f869 337 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 102 118 - T 11-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 XFUD_05300 928ef0239d305d75404ea71fff26f869 337 SUPERFAMILY SSF53474 50 333 1.0E-69 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_05300 928ef0239d305d75404ea71fff26f869 337 Gene3D G3DSA:3.40.50.1820 11 337 2.4E-98 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_05300 928ef0239d305d75404ea71fff26f869 337 Pfam PF07859 alpha/beta hydrolase fold 103 309 1.6E-71 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 XFUD_04705 8bb245d5bd1a5138d8c35d0109739047 506 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 505 43.066 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFUD_04705 8bb245d5bd1a5138d8c35d0109739047 506 Gene3D G3DSA:3.30.930.10 156 500 5.0E-128 T 11-10-2018 XFUD_04705 8bb245d5bd1a5138d8c35d0109739047 506 SUPERFAMILY SSF55681 163 503 6.58E-115 T 11-10-2018 XFUD_04705 8bb245d5bd1a5138d8c35d0109739047 506 SUPERFAMILY SSF50249 12 156 4.97E-38 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_04705 8bb245d5bd1a5138d8c35d0109739047 506 Pfam PF01336 OB-fold nucleic acid binding domain 70 147 6.8E-15 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XFUD_04705 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 200 210 9.9E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFUD_04705 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 263 280 9.9E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFUD_04705 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 387 403 9.9E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFUD_04705 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 216 232 9.9E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFUD_04705 8bb245d5bd1a5138d8c35d0109739047 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 245 258 9.9E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFUD_04705 8bb245d5bd1a5138d8c35d0109739047 506 Pfam PF00152 tRNA synthetases class II (D, K and N) 164 502 8.1E-79 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 XFUD_04705 8bb245d5bd1a5138d8c35d0109739047 506 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 505 1.2E-199 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 XFUD_04705 8bb245d5bd1a5138d8c35d0109739047 506 Gene3D G3DSA:2.40.50.140 14 155 2.6E-39 T 11-10-2018 XFUD_08210 c743545acadabeacba14b14d1b970fed 439 Pfam PF07676 WD40-like Beta Propeller Repeat 286 319 5.5E-15 T 11-10-2018 IPR011659 WD40-like Beta Propeller XFUD_08210 c743545acadabeacba14b14d1b970fed 439 Pfam PF07676 WD40-like Beta Propeller Repeat 208 232 1.2E-6 T 11-10-2018 IPR011659 WD40-like Beta Propeller XFUD_08210 c743545acadabeacba14b14d1b970fed 439 Pfam PF07676 WD40-like Beta Propeller Repeat 243 276 9.8E-6 T 11-10-2018 IPR011659 WD40-like Beta Propeller XFUD_08210 c743545acadabeacba14b14d1b970fed 439 Gene3D G3DSA:3.40.50.10070 24 167 5.4E-40 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 XFUD_08210 c743545acadabeacba14b14d1b970fed 439 Gene3D G3DSA:2.120.10.30 168 439 8.5E-85 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XFUD_08210 c743545acadabeacba14b14d1b970fed 439 SUPERFAMILY SSF69304 159 434 9.55E-50 T 11-10-2018 XFUD_08210 c743545acadabeacba14b14d1b970fed 439 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 21 433 1.2E-157 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 XFUD_08210 c743545acadabeacba14b14d1b970fed 439 Pfam PF04052 TolB amino-terminal domain 27 132 1.3E-29 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 XFUD_08210 c743545acadabeacba14b14d1b970fed 439 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 8 432 47.367 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 XFUD_08210 c743545acadabeacba14b14d1b970fed 439 SUPERFAMILY SSF52964 33 164 7.72E-36 T 11-10-2018 XFUD_11245 3f3ce5f71a7518b0607e9bccfcdb02fc 421 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 19 408 1.2E-113 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XFUD_11245 3f3ce5f71a7518b0607e9bccfcdb02fc 421 SUPERFAMILY SSF56014 308 413 3.66E-5 T 11-10-2018 XFUD_11245 3f3ce5f71a7518b0607e9bccfcdb02fc 421 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 17 411 28.35 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XFUD_11245 3f3ce5f71a7518b0607e9bccfcdb02fc 421 PIRSF PIRSF004640 12 418 8.2E-122 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XFUD_11245 3f3ce5f71a7518b0607e9bccfcdb02fc 421 Gene3D G3DSA:3.20.20.20 17 302 3.8E-93 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XFUD_11245 3f3ce5f71a7518b0607e9bccfcdb02fc 421 Pfam PF04551 GcpE protein 22 409 2.5E-106 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 XFUD_11245 3f3ce5f71a7518b0607e9bccfcdb02fc 421 Gene3D G3DSA:3.30.413.10 303 419 4.7E-36 T 11-10-2018 XFUD_00140 b3f0eee754e0d1e5ef77943f8680d01d 116 SUPERFAMILY SSF54523 1 110 2.98E-21 T 11-10-2018 XFUD_00140 b3f0eee754e0d1e5ef77943f8680d01d 116 Gene3D G3DSA:3.30.700.10 1 115 2.9E-17 T 11-10-2018 XFUD_00140 b3f0eee754e0d1e5ef77943f8680d01d 116 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 17 101 7.3E-25 T 11-10-2018 IPR031982 Type IV minor pilin ComP XFUD_01105 8329a2e48914cfcad57b20a85ae36112 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 176 1.0E-99 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 XFUD_01105 8329a2e48914cfcad57b20a85ae36112 185 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 175 8.6E-86 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 XFUD_01105 8329a2e48914cfcad57b20a85ae36112 185 SUPERFAMILY SSF51182 2 175 9.58E-71 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily XFUD_01105 8329a2e48914cfcad57b20a85ae36112 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 173 8.7E-69 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 XFUD_01105 8329a2e48914cfcad57b20a85ae36112 185 Gene3D G3DSA:2.60.120.10 1 184 2.8E-67 T 11-10-2018 IPR014710 RmlC-like jelly roll fold XFUD_08530 2632a6339b92c7668e1c6f58ba4ef2a7 840 Gene3D G3DSA:3.40.50.300 21 218 6.9E-14 T 11-10-2018 XFUD_08530 2632a6339b92c7668e1c6f58ba4ef2a7 840 SUPERFAMILY SSF52540 48 382 3.1E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_08530 2632a6339b92c7668e1c6f58ba4ef2a7 840 SUPERFAMILY SSF52540 43 208 6.08E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_08530 2632a6339b92c7668e1c6f58ba4ef2a7 840 Pfam PF04851 Type III restriction enzyme, res subunit 43 201 5.2E-6 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 Pfam PF13180 PDZ domain 292 382 8.5E-12 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 SUPERFAMILY SSF50156 290 386 2.89E-21 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 SUPERFAMILY SSF50494 62 287 3.07E-62 T 11-10-2018 IPR009003 Peptidase S1, PA clan XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 3.5E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 242 259 3.5E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 124 136 3.5E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 185 209 3.5E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 220 237 3.5E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 PRINTS PR00834 HtrA/DegQ protease family signature 145 165 3.5E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 Gene3D G3DSA:2.40.10.120 62 284 3.8E-79 T 11-10-2018 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 Gene3D G3DSA:2.30.42.10 289 390 1.3E-24 T 11-10-2018 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 SMART SM00228 291 373 1.3E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 SMART SM00228 397 473 0.22 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 Gene3D G3DSA:2.30.42.10 401 481 1.7E-9 T 11-10-2018 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 64 475 4.9E-128 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 SUPERFAMILY SSF50156 406 475 2.5E-8 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFUD_01210 a7ad56a40d706206394decf14c65ed33 481 Pfam PF13365 Trypsin-like peptidase domain 114 249 1.0E-31 T 11-10-2018 XFUD_09010 bd13ed91c01a0406239b36c530b807ae 98 Gene3D G3DSA:3.30.2310.20 2 94 5.2E-12 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XFUD_09010 bd13ed91c01a0406239b36c530b807ae 98 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 94 1.4E-16 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XFUD_05380 fff378bccc2754f53a08a63907fc7e0c 266 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 122 206 4.7E-12 T 11-10-2018 IPR032030 YscD, cytoplasmic domain XFUD_05380 fff378bccc2754f53a08a63907fc7e0c 266 Gene3D G3DSA:2.60.200.20 97 207 3.2E-16 T 11-10-2018 XFUD_05380 fff378bccc2754f53a08a63907fc7e0c 266 SUPERFAMILY SSF49879 114 204 3.94E-16 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 XFUD_10235 c7f1a13ef964f2325efee348cabdaec2 165 PIRSF PIRSF016487 1 165 1.5E-63 T 11-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like XFUD_10235 c7f1a13ef964f2325efee348cabdaec2 165 Pfam PF01928 CYTH domain 2 141 3.9E-16 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 XFUD_10235 c7f1a13ef964f2325efee348cabdaec2 165 SUPERFAMILY SSF55154 1 154 2.45E-38 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 XFUD_10235 c7f1a13ef964f2325efee348cabdaec2 165 Gene3D G3DSA:2.40.320.10 1 157 1.3E-41 T 11-10-2018 XFUD_10235 c7f1a13ef964f2325efee348cabdaec2 165 SMART SM01118 2 155 4.0E-21 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 XFUD_08170 87c11f5c9cd2915095687a4f63aecd32 259 Gene3D G3DSA:2.40.30.10 1 97 7.9E-28 T 11-10-2018 XFUD_08170 87c11f5c9cd2915095687a4f63aecd32 259 SUPERFAMILY SSF63380 7 100 4.95E-24 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel XFUD_08170 87c11f5c9cd2915095687a4f63aecd32 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 229 1.5E-10 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 XFUD_08170 87c11f5c9cd2915095687a4f63aecd32 259 Pfam PF00970 Oxidoreductase FAD-binding domain 21 98 1.0E-6 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 XFUD_08170 87c11f5c9cd2915095687a4f63aecd32 259 SUPERFAMILY SSF52343 104 257 1.57E-39 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XFUD_08170 87c11f5c9cd2915095687a4f63aecd32 259 Gene3D G3DSA:3.40.50.80 101 255 5.0E-42 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain XFUD_06225 5c429f92629b598ec1a8cb36e4e16d05 153 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 1.0E-30 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type XFUD_06225 5c429f92629b598ec1a8cb36e4e16d05 153 Gene3D G3DSA:1.10.10.10 1 141 3.3E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_06225 5c429f92629b598ec1a8cb36e4e16d05 153 Pfam PF02082 Transcriptional regulator 3 83 2.4E-23 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type XFUD_06225 5c429f92629b598ec1a8cb36e4e16d05 153 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 3.3E-53 T 11-10-2018 IPR014290 SUF system FeS cluster assembly regulator XFUD_06225 5c429f92629b598ec1a8cb36e4e16d05 153 SUPERFAMILY SSF46785 3 134 1.09E-34 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_04540 0330284d760aed43d5d092f9d90da226 267 Gene3D G3DSA:3.30.70.1400 1 85 2.3E-17 T 11-10-2018 XFUD_04540 0330284d760aed43d5d092f9d90da226 267 Gene3D G3DSA:2.40.30.160 152 252 5.2E-22 T 11-10-2018 XFUD_04540 0330284d760aed43d5d092f9d90da226 267 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 143 206 1.5E-21 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site XFUD_04540 0330284d760aed43d5d092f9d90da226 267 SUPERFAMILY SSF103025 2 198 3.14E-42 T 11-10-2018 XFUD_04540 0330284d760aed43d5d092f9d90da226 267 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 182 241 1.2E-4 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1074 13.44 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1059 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 Gene3D G3DSA:3.40.50.20 1 116 1.2E-48 T 11-10-2018 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.294 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 SUPERFAMILY SSF56059 128 401 1.11E-107 T 11-10-2018 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 SMART SM00851 962 1048 1.0E-28 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 428 548 2.1E-37 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 Gene3D G3DSA:3.40.50.20 555 663 4.8E-49 T 11-10-2018 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 Gene3D G3DSA:3.40.50.1380 945 1079 6.3E-37 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 Gene3D G3DSA:3.30.470.20 119 403 4.8E-127 T 11-10-2018 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.2E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.2E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.2E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.2E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.2E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.2E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.2E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 Gene3D G3DSA:3.30.470.20 666 942 3.2E-113 T 11-10-2018 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 SUPERFAMILY SSF52440 1 127 2.73E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 SUPERFAMILY SSF52440 558 676 2.01E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 SUPERFAMILY SSF56059 674 939 6.72E-101 T 11-10-2018 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 SUPERFAMILY SSF48108 396 555 1.28E-48 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 Pfam PF02142 MGS-like domain 963 1047 1.2E-16 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 882 1.4E-38 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.6E-70 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 Gene3D G3DSA:1.10.1030.10 404 554 4.1E-45 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 SUPERFAMILY SSF52335 944 1077 5.36E-38 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily XFUD_04680 957d1e098b6fab3b2499e874e3384f2c 1080 SMART SM01096 425 548 6.0E-69 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 XFUD_05710 cf8be024be226ba05d6c1bfb2b9625dc 401 Pfam PF00155 Aminotransferase class I and II 45 385 1.3E-58 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XFUD_05710 cf8be024be226ba05d6c1bfb2b9625dc 401 SUPERFAMILY SSF53383 9 389 7.51E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFUD_05710 cf8be024be226ba05d6c1bfb2b9625dc 401 Gene3D G3DSA:3.90.1150.10 44 382 6.0E-122 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFUD_05710 cf8be024be226ba05d6c1bfb2b9625dc 401 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 385 2.0E-142 T 11-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 XFUD_05710 cf8be024be226ba05d6c1bfb2b9625dc 401 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 6 389 43.881 T 11-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 XFUD_05710 cf8be024be226ba05d6c1bfb2b9625dc 401 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 XFUD_05710 cf8be024be226ba05d6c1bfb2b9625dc 401 Gene3D G3DSA:3.40.640.10 60 291 6.0E-122 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFUD_09795 970f2e9ba4cfe6270506222acfa3ae78 298 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 61 76 8.2E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_09795 970f2e9ba4cfe6270506222acfa3ae78 298 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 8.2E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_09795 970f2e9ba4cfe6270506222acfa3ae78 298 Gene3D G3DSA:3.40.50.300 6 185 5.9E-48 T 11-10-2018 XFUD_09795 970f2e9ba4cfe6270506222acfa3ae78 298 Hamap MF_00367 GTPase Era [era]. 7 297 35.206 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_09795 970f2e9ba4cfe6270506222acfa3ae78 298 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 167 1.3E-29 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFUD_09795 970f2e9ba4cfe6270506222acfa3ae78 298 Pfam PF01926 50S ribosome-binding GTPase 11 126 1.7E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_09795 970f2e9ba4cfe6270506222acfa3ae78 298 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 280 3.6E-85 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_09795 970f2e9ba4cfe6270506222acfa3ae78 298 Pfam PF07650 KH domain 210 285 4.0E-20 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_09795 970f2e9ba4cfe6270506222acfa3ae78 298 SUPERFAMILY SSF52540 11 206 6.83E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_09795 970f2e9ba4cfe6270506222acfa3ae78 298 SUPERFAMILY SSF54814 183 298 3.14E-40 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XFUD_09795 970f2e9ba4cfe6270506222acfa3ae78 298 Gene3D G3DSA:3.30.300.20 187 298 3.9E-41 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta XFUD_01855 a9866cfb8be0f65744a5faf0e621ae3d 124 SUPERFAMILY SSF81273 80 122 5.89E-12 T 11-10-2018 XFUD_01855 a9866cfb8be0f65744a5faf0e621ae3d 124 Gene3D G3DSA:4.10.430.10 70 124 1.8E-16 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 XFUD_01855 a9866cfb8be0f65744a5faf0e621ae3d 124 Pfam PF00816 H-NS histone family 13 115 1.4E-20 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 XFUD_01855 a9866cfb8be0f65744a5faf0e621ae3d 124 SMART SM00528 74 121 7.5E-12 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 XFUD_09225 88c688650e47b9e13dd828c48cce9f0a 350 SUPERFAMILY SSF57783 6 86 2.38E-29 T 11-10-2018 XFUD_09225 88c688650e47b9e13dd828c48cce9f0a 350 SMART SM00400 32 86 7.3E-27 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XFUD_09225 88c688650e47b9e13dd828c48cce9f0a 350 Gene3D G3DSA:3.90.580.10 2 95 4.0E-31 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 XFUD_09225 88c688650e47b9e13dd828c48cce9f0a 350 Pfam PF01807 CHC2 zinc finger 6 86 1.4E-30 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XFUD_02110 88c688650e47b9e13dd828c48cce9f0a 350 SUPERFAMILY SSF57783 6 86 2.38E-29 T 11-10-2018 XFUD_02110 88c688650e47b9e13dd828c48cce9f0a 350 SMART SM00400 32 86 7.3E-27 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XFUD_02110 88c688650e47b9e13dd828c48cce9f0a 350 Gene3D G3DSA:3.90.580.10 2 95 4.0E-31 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 XFUD_02110 88c688650e47b9e13dd828c48cce9f0a 350 Pfam PF01807 CHC2 zinc finger 6 86 1.4E-30 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 XFUD_09765 919a6275c8fab3eb877f98ccee9e6f23 243 Gene3D G3DSA:1.10.10.880 16 83 1.0E-7 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 XFUD_09765 919a6275c8fab3eb877f98ccee9e6f23 243 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 19 88 4.1E-9 T 11-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 XFUD_09765 919a6275c8fab3eb877f98ccee9e6f23 243 SUPERFAMILY SSF89069 16 83 8.37E-13 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 XFUD_04750 d7a1f480bf2af892f501c6dfb21e6fb4 275 SUPERFAMILY SSF51730 3 274 4.9E-87 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like XFUD_04750 d7a1f480bf2af892f501c6dfb21e6fb4 275 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 4 273 8.9E-98 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 XFUD_04750 d7a1f480bf2af892f501c6dfb21e6fb4 275 Gene3D G3DSA:3.20.20.220 1 275 1.5E-93 T 11-10-2018 XFUD_04750 d7a1f480bf2af892f501c6dfb21e6fb4 275 Pfam PF02219 Methylenetetrahydrofolate reductase 4 274 8.8E-83 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 XFUD_00500 c959c89c83e3eff29be2707629b22df8 211 Pfam PF00717 Peptidase S24-like 126 191 1.4E-14 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XFUD_00500 c959c89c83e3eff29be2707629b22df8 211 Gene3D G3DSA:1.10.10.10 1 68 1.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_00500 c959c89c83e3eff29be2707629b22df8 211 Pfam PF01726 LexA DNA binding domain 2 64 1.4E-16 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 XFUD_00500 c959c89c83e3eff29be2707629b22df8 211 TIGRFAM TIGR00498 lexA: repressor LexA 2 209 8.3E-54 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 XFUD_00500 c959c89c83e3eff29be2707629b22df8 211 SUPERFAMILY SSF51306 86 208 8.37E-33 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XFUD_00500 c959c89c83e3eff29be2707629b22df8 211 Hamap MF_00015 LexA repressor [lexA]. 2 210 30.083 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 XFUD_00500 c959c89c83e3eff29be2707629b22df8 211 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 162 174 3.7E-10 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 XFUD_00500 c959c89c83e3eff29be2707629b22df8 211 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 123 133 3.7E-10 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 XFUD_00500 c959c89c83e3eff29be2707629b22df8 211 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 134 145 3.7E-10 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 XFUD_00500 c959c89c83e3eff29be2707629b22df8 211 SUPERFAMILY SSF46785 1 69 1.82E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_00500 c959c89c83e3eff29be2707629b22df8 211 Gene3D G3DSA:2.10.109.10 92 210 4.3E-35 T 11-10-2018 XFUD_01690 e1608e8dda1f68ecc11f757770500aad 145 Pfam PF04519 Polymer-forming cytoskeletal 16 115 1.5E-22 T 11-10-2018 IPR007607 Bactofilin A/B XFUD_00775 5cdcbc92609de7449c8e5f36995bfbff 131 Pfam PF01597 Glycine cleavage H-protein 8 128 6.7E-44 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate XFUD_00775 5cdcbc92609de7449c8e5f36995bfbff 131 SUPERFAMILY SSF51230 4 127 5.63E-44 T 11-10-2018 IPR011053 Single hybrid motif XFUD_00775 5cdcbc92609de7449c8e5f36995bfbff 131 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 129 1.6E-48 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 XFUD_00775 5cdcbc92609de7449c8e5f36995bfbff 131 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 39.253 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 XFUD_00775 5cdcbc92609de7449c8e5f36995bfbff 131 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 XFUD_00775 5cdcbc92609de7449c8e5f36995bfbff 131 Gene3D G3DSA:2.40.50.100 2 131 4.0E-48 T 11-10-2018 XFUD_06420 7b6229acedd73e717ff42785cf684994 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 8.0E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_06420 7b6229acedd73e717ff42785cf684994 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_06420 7b6229acedd73e717ff42785cf684994 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 18 142 9.6E-29 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 XFUD_06420 7b6229acedd73e717ff42785cf684994 144 Gene3D G3DSA:3.30.700.10 44 143 1.8E-23 T 11-10-2018 XFUD_06420 7b6229acedd73e717ff42785cf684994 144 SUPERFAMILY SSF54523 46 142 5.23E-26 T 11-10-2018 XFUD_06420 7b6229acedd73e717ff42785cf684994 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 18 43 8.5E-10 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 XFUD_06420 7b6229acedd73e717ff42785cf684994 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 54 72 8.5E-10 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 XFUD_06420 7b6229acedd73e717ff42785cf684994 144 Pfam PF08334 Type II secretion system (T2SS), protein G 41 142 1.2E-29 T 11-10-2018 IPR013545 Type II secretion system protein G XFUD_09370 d189903626eb6a4ab6e7f5f7dbe9280f 150 Pfam PF00075 RNase H 2 139 3.0E-45 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 XFUD_09370 d189903626eb6a4ab6e7f5f7dbe9280f 150 Hamap MF_00042 Ribonuclease H [rnhA]. 1 149 35.556 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 XFUD_09370 d189903626eb6a4ab6e7f5f7dbe9280f 150 SUPERFAMILY SSF53098 2 138 1.64E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFUD_09370 d189903626eb6a4ab6e7f5f7dbe9280f 150 Gene3D G3DSA:3.30.420.10 1 149 9.4E-56 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFUD_02735 a089284b025002405a898d7caaeb0cd3 437 Pfam PF00375 Sodium:dicarboxylate symporter family 13 415 6.4E-112 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 XFUD_02735 a089284b025002405a898d7caaeb0cd3 437 SUPERFAMILY SSF118215 12 415 1.26E-100 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XFUD_02735 a089284b025002405a898d7caaeb0cd3 437 Gene3D G3DSA:1.10.3860.10 1 431 5.4E-116 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XFUD_02735 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 1.1E-25 T 11-10-2018 XFUD_02735 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.1E-25 T 11-10-2018 XFUD_02735 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 1.1E-25 T 11-10-2018 XFUD_02735 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 1.1E-25 T 11-10-2018 XFUD_02735 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 1.1E-25 T 11-10-2018 XFUD_02735 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 1.1E-25 T 11-10-2018 XFUD_02735 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 1.1E-25 T 11-10-2018 XFUD_02735 a089284b025002405a898d7caaeb0cd3 437 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 1.1E-25 T 11-10-2018 XFUD_00405 83ded0c60ab16a8f91077dce78a06cf3 610 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 8.0E-248 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFUD_00405 83ded0c60ab16a8f91077dce78a06cf3 610 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.435 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFUD_00405 83ded0c60ab16a8f91077dce78a06cf3 610 Gene3D G3DSA:3.50.30.80 419 570 9.2E-53 T 11-10-2018 XFUD_00405 83ded0c60ab16a8f91077dce78a06cf3 610 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFUD_00405 83ded0c60ab16a8f91077dce78a06cf3 610 SUPERFAMILY SSF52016 419 606 2.35E-59 T 11-10-2018 XFUD_00405 83ded0c60ab16a8f91077dce78a06cf3 610 SUPERFAMILY SSF143975 4 418 1.96E-135 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFUD_00405 83ded0c60ab16a8f91077dce78a06cf3 610 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFUD_00405 83ded0c60ab16a8f91077dce78a06cf3 610 Pfam PF00920 Dehydratase family 34 603 8.6E-218 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 SUPERFAMILY SSF109604 25 211 3.45E-69 T 11-10-2018 XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 Gene3D G3DSA:3.10.20.30 401 474 8.2E-28 T 11-10-2018 IPR012675 Beta-grasp domain superfamily XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 Gene3D G3DSA:1.10.3210.10 25 210 5.9E-73 T 11-10-2018 XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 SMART SM00471 61 173 4.1E-11 T 11-10-2018 IPR003607 HD/PDEase domain XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 SMART SM00954 255 365 3.2E-56 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 SUPERFAMILY SSF81301 201 412 1.32E-57 T 11-10-2018 XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 Pfam PF04607 Region found in RelA / SpoT proteins 255 364 2.1E-33 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 Pfam PF13328 HD domain 47 195 2.2E-49 T 11-10-2018 IPR003607 HD/PDEase domain XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 Pfam PF13291 ACT domain 646 722 1.7E-18 T 11-10-2018 IPR002912 ACT domain XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 Gene3D G3DSA:3.30.70.260 646 723 8.1E-14 T 11-10-2018 XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 Gene3D G3DSA:3.30.460.10 214 345 1.7E-41 T 11-10-2018 XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 48 721 1.6E-224 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 SUPERFAMILY SSF81271 395 467 8.67E-20 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 Pfam PF02824 TGS domain 408 467 7.0E-17 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 XFUD_01495 617aed489d69e03fd7c0d21db688e652 723 SUPERFAMILY SSF55021 651 722 1.22E-8 T 11-10-2018 XFUD_09920 2e35163fff401c452977aef63c7fa773 264 SUPERFAMILY SSF52540 1 249 6.83E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_09920 2e35163fff401c452977aef63c7fa773 264 PIRSF PIRSF009320 2 82 3.3E-16 T 11-10-2018 XFUD_09920 2e35163fff401c452977aef63c7fa773 264 PIRSF PIRSF009320 89 260 6.2E-10 T 11-10-2018 XFUD_09920 2e35163fff401c452977aef63c7fa773 264 Gene3D G3DSA:3.40.50.300 1 263 1.1E-75 T 11-10-2018 XFUD_09920 2e35163fff401c452977aef63c7fa773 264 Pfam PF13614 AAA domain 3 177 4.1E-62 T 11-10-2018 IPR025669 AAA domain XFUD_04095 74dcfc779777b482c3ba7a62733f9eb8 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 201 301 1.6E-5 T 11-10-2018 IPR010918 PurM-like, C-terminal domain XFUD_04095 74dcfc779777b482c3ba7a62733f9eb8 324 SUPERFAMILY SSF56042 141 305 2.69E-32 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFUD_04095 74dcfc779777b482c3ba7a62733f9eb8 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 135 1.1E-20 T 11-10-2018 IPR016188 PurM-like, N-terminal domain XFUD_04095 74dcfc779777b482c3ba7a62733f9eb8 324 Gene3D G3DSA:3.30.1330.10 1 141 2.4E-42 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFUD_04095 74dcfc779777b482c3ba7a62733f9eb8 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 322 2.0E-114 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 XFUD_04095 74dcfc779777b482c3ba7a62733f9eb8 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 322 26.198 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 XFUD_04095 74dcfc779777b482c3ba7a62733f9eb8 324 PIRSF PIRSF005303 1 322 1.2E-79 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 XFUD_04095 74dcfc779777b482c3ba7a62733f9eb8 324 SUPERFAMILY SSF55326 2 135 1.92E-33 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFUD_04095 74dcfc779777b482c3ba7a62733f9eb8 324 Gene3D G3DSA:3.90.650.10 143 323 1.6E-47 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFUD_06650 98ac3f028c416edafffb47d939bb3be2 316 Gene3D G3DSA:3.40.50.300 1 205 2.8E-6 T 11-10-2018 XFUD_07140 98ac3f028c416edafffb47d939bb3be2 316 Gene3D G3DSA:3.40.50.300 1 205 2.8E-6 T 11-10-2018 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 SUPERFAMILY SSF53738 4 168 4.71E-45 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 1.0E-43 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 Gene3D G3DSA:3.40.120.10 176 363 3.1E-62 T 11-10-2018 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 387 444 3.0E-10 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 365 1.7E-29 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 SUPERFAMILY SSF55957 360 447 3.79E-17 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 256 2.2E-18 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 447 44.983 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 SUPERFAMILY SSF53738 158 258 2.51E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 Gene3D G3DSA:3.40.120.10 3 156 7.4E-48 T 11-10-2018 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 Gene3D G3DSA:3.40.120.10 259 341 3.1E-62 T 11-10-2018 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 SUPERFAMILY SSF53738 260 364 1.73E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 Gene3D G3DSA:3.30.310.50 372 448 8.0E-18 T 11-10-2018 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 445 8.5E-203 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 5.2E-14 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 5.2E-14 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_06185 bb5e8f80ecbbe02e29ea23a839b6f659 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 5.2E-14 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 SUPERFAMILY SSF46955 403 474 7.87E-17 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 SMART SM00874 402 470 6.8E-25 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 Pfam PF03484 tRNA synthetase B5 domain 407 470 2.7E-16 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 Gene3D G3DSA:3.30.56.10 402 475 2.0E-22 T 11-10-2018 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 Gene3D G3DSA:3.30.56.10 4 180 4.0E-63 T 11-10-2018 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 SMART SM00873 211 384 4.7E-84 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 Pfam PF03483 B3/4 domain 212 384 2.7E-64 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 SMART SM00896 698 791 2.5E-36 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 1.3E-25 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 Gene3D G3DSA:2.40.50.140 39 153 4.0E-63 T 11-10-2018 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 SUPERFAMILY SSF50249 41 191 2.94E-41 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 Gene3D G3DSA:3.30.930.10 488 688 2.6E-57 T 11-10-2018 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 Gene3D G3DSA:3.30.70.380 699 792 9.5E-25 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 SUPERFAMILY SSF56037 196 391 1.07E-68 T 11-10-2018 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 3.1E-225 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 Gene3D G3DSA:3.50.40.10 197 393 1.7E-70 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 Pfam PF01588 Putative tRNA binding domain 45 144 1.5E-22 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 SUPERFAMILY SSF54991 693 791 1.96E-27 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 SUPERFAMILY SSF55681 466 687 9.44E-47 T 11-10-2018 XFUD_03145 7467df0bf2eea706251fb1e9c1a565a2 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 45.189 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 XFUD_03370 ff9ef4d6607e4906f64f4524000a98fc 613 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 209 3.0E-18 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 XFUD_03370 ff9ef4d6607e4906f64f4524000a98fc 613 Gene3D G3DSA:3.40.710.10 286 467 6.1E-111 T 11-10-2018 XFUD_03370 ff9ef4d6607e4906f64f4524000a98fc 613 Pfam PF00905 Penicillin binding protein transpeptidase domain 250 546 9.4E-83 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XFUD_03370 ff9ef4d6607e4906f64f4524000a98fc 613 SUPERFAMILY SSF56601 177 577 2.9E-96 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFUD_03370 ff9ef4d6607e4906f64f4524000a98fc 613 Gene3D G3DSA:3.30.450.330 226 550 6.1E-111 T 11-10-2018 XFUD_03370 ff9ef4d6607e4906f64f4524000a98fc 613 SUPERFAMILY SSF56519 57 224 4.58E-47 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 XFUD_03370 ff9ef4d6607e4906f64f4524000a98fc 613 Gene3D G3DSA:3.90.1310.30 53 224 1.8E-49 T 11-10-2018 XFUD_03370 ff9ef4d6607e4906f64f4524000a98fc 613 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 13 561 43.053 T 11-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFUD_03190 ad5a14bf3b7244b53bcac27dd099fc5f 444 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 5 440 31.144 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 XFUD_03190 ad5a14bf3b7244b53bcac27dd099fc5f 444 Pfam PF13742 OB-fold nucleic acid binding domain 11 100 6.2E-26 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 XFUD_03190 ad5a14bf3b7244b53bcac27dd099fc5f 444 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 355 1.7E-125 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 XFUD_03190 ad5a14bf3b7244b53bcac27dd099fc5f 444 Pfam PF02601 Exonuclease VII, large subunit 124 437 2.5E-93 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 XFUD_06810 404d481ffab0867ef6708e3f00e8ef3c 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 43 58 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 XFUD_06810 404d481ffab0867ef6708e3f00e8ef3c 183 PIRSF PIRSF000303 2 179 7.2E-56 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFUD_06810 404d481ffab0867ef6708e3f00e8ef3c 183 Pfam PF00255 Glutathione peroxidase 27 129 1.2E-32 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFUD_06810 404d481ffab0867ef6708e3f00e8ef3c 183 PRINTS PR01011 Glutathione peroxidase family signature 137 146 6.1E-15 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFUD_06810 404d481ffab0867ef6708e3f00e8ef3c 183 PRINTS PR01011 Glutathione peroxidase family signature 76 92 6.1E-15 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFUD_06810 404d481ffab0867ef6708e3f00e8ef3c 183 PRINTS PR01011 Glutathione peroxidase family signature 41 58 6.1E-15 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 XFUD_06810 404d481ffab0867ef6708e3f00e8ef3c 183 SUPERFAMILY SSF52833 21 175 1.77E-47 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_06810 404d481ffab0867ef6708e3f00e8ef3c 183 Gene3D G3DSA:3.40.30.10 15 182 5.5E-51 T 11-10-2018 XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 185 5.0E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 SUPERFAMILY SSF54211 239 494 1.67E-95 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 Gene3D G3DSA:3.30.230.80 238 405 3.2E-68 T 11-10-2018 XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 Gene3D G3DSA:3.30.565.10 1 230 3.0E-76 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 PRINTS PR00775 90kDa heat shock protein signature 78 95 3.8E-58 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 PRINTS PR00775 90kDa heat shock protein signature 8 28 3.8E-58 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 PRINTS PR00775 90kDa heat shock protein signature 123 145 3.8E-58 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 PRINTS PR00775 90kDa heat shock protein signature 193 211 3.8E-58 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 PRINTS PR00775 90kDa heat shock protein signature 96 113 3.8E-58 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 PRINTS PR00775 90kDa heat shock protein signature 175 192 3.8E-58 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 PRINTS PR00775 90kDa heat shock protein signature 29 51 3.8E-58 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 SMART SM00387 30 187 2.1E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 Gene3D G3DSA:3.40.50.11260 406 492 5.2E-32 T 11-10-2018 XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 PIRSF PIRSF002583 2 637 8.0E-211 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 633 31.777 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 Gene3D G3DSA:1.20.120.790 501 634 1.9E-40 T 11-10-2018 IPR037196 HSP90, C-terminal domain XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 SUPERFAMILY SSF55874 8 217 1.01E-64 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 SUPERFAMILY SSF110942 521 633 3.53E-33 T 11-10-2018 IPR037196 HSP90, C-terminal domain XFUD_04190 1a8ce69cd8d4f77354c6810b8f0160a6 637 Pfam PF00183 Hsp90 protein 221 632 2.2E-130 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 XFUD_00135 6b0f24be713bc11370771bccc71405f0 1230 Pfam PF05567 Neisseria PilC beta-propeller domain 744 1046 1.9E-58 T 11-10-2018 IPR008707 PilC beta-propeller domain XFUD_00135 6b0f24be713bc11370771bccc71405f0 1230 SUPERFAMILY SSF50998 740 1208 1.18E-8 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XFUD_01080 55b0b3758a4e5a68af5d63106120ef3d 608 SUPERFAMILY SSF52540 78 364 4.53E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01080 55b0b3758a4e5a68af5d63106120ef3d 608 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 157 165 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site XFUD_01080 55b0b3758a4e5a68af5d63106120ef3d 608 Gene3D G3DSA:3.40.50.300 217 434 4.0E-53 T 11-10-2018 XFUD_01080 55b0b3758a4e5a68af5d63106120ef3d 608 Gene3D G3DSA:3.40.50.300 2 215 1.7E-75 T 11-10-2018 XFUD_01080 55b0b3758a4e5a68af5d63106120ef3d 608 Pfam PF00271 Helicase conserved C-terminal domain 235 343 1.1E-29 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_01080 55b0b3758a4e5a68af5d63106120ef3d 608 SMART SM00487 28 226 2.0E-62 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_01080 55b0b3758a4e5a68af5d63106120ef3d 608 Gene3D G3DSA:3.30.70.330 497 569 2.1E-13 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily XFUD_01080 55b0b3758a4e5a68af5d63106120ef3d 608 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 4 568 46.703 T 11-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 XFUD_01080 55b0b3758a4e5a68af5d63106120ef3d 608 Pfam PF00270 DEAD/DEAH box helicase 34 198 6.9E-50 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFUD_01080 55b0b3758a4e5a68af5d63106120ef3d 608 Pfam PF03880 DbpA RNA binding domain 497 566 7.9E-23 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain XFUD_01080 55b0b3758a4e5a68af5d63106120ef3d 608 SMART SM00490 262 343 2.3E-34 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_08265 8b991b7db0c55bcd0874796d2086894b 349 SMART SM00478 38 192 8.7E-42 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XFUD_08265 8b991b7db0c55bcd0874796d2086894b 349 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 194 210 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 XFUD_08265 8b991b7db0c55bcd0874796d2086894b 349 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 280 4.2E-103 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 XFUD_08265 8b991b7db0c55bcd0874796d2086894b 349 Pfam PF14815 NUDIX domain 236 347 1.2E-20 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 XFUD_08265 8b991b7db0c55bcd0874796d2086894b 349 Gene3D G3DSA:1.10.340.30 20 131 1.7E-79 T 11-10-2018 XFUD_08265 8b991b7db0c55bcd0874796d2086894b 349 Gene3D G3DSA:3.90.79.10 234 349 2.4E-15 T 11-10-2018 XFUD_08265 8b991b7db0c55bcd0874796d2086894b 349 SUPERFAMILY SSF55811 222 348 1.89E-23 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XFUD_08265 8b991b7db0c55bcd0874796d2086894b 349 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 2.0E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 XFUD_08265 8b991b7db0c55bcd0874796d2086894b 349 SMART SM00525 193 213 0.0044 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 XFUD_08265 8b991b7db0c55bcd0874796d2086894b 349 Gene3D G3DSA:1.10.1670.10 8 212 1.7E-79 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 XFUD_08265 8b991b7db0c55bcd0874796d2086894b 349 SUPERFAMILY SSF48150 2 226 1.73E-71 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 XFUD_06255 5d4379a9b3136801a8988c840421b0b0 183 Gene3D G3DSA:3.60.20.10 8 183 1.6E-63 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFUD_06255 5d4379a9b3136801a8988c840421b0b0 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 13 183 3.9E-81 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 XFUD_06255 5d4379a9b3136801a8988c840421b0b0 183 SUPERFAMILY SSF56235 9 180 4.27E-54 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFUD_06255 5d4379a9b3136801a8988c840421b0b0 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 12 183 40.675 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 XFUD_06255 5d4379a9b3136801a8988c840421b0b0 183 Pfam PF00227 Proteasome subunit 9 180 6.0E-22 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 XFUD_06255 5d4379a9b3136801a8988c840421b0b0 183 PIRSF PIRSF039093 6 183 4.5E-82 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 XFUD_08900 a4df3e974275f98101f38302a863db0b 466 Gene3D G3DSA:1.10.1200.160 398 436 7.6E-58 T 11-10-2018 XFUD_08900 a4df3e974275f98101f38302a863db0b 466 Gene3D G3DSA:2.40.128.260 274 455 7.6E-58 T 11-10-2018 XFUD_08900 a4df3e974275f98101f38302a863db0b 466 Pfam PF03743 Bacterial conjugation TrbI-like protein 272 457 1.5E-56 T 11-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI XFUD_09500 9e941bc65b4e09654444e73b24aee3be 432 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 216 390 3.6E-18 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFUD_09500 9e941bc65b4e09654444e73b24aee3be 432 Pfam PF04830 Possible hemagglutinin (DUF637) 2 56 1.2E-6 T 11-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative XFUD_11845 d12274ccf800dedff71c68c7ebdc001f 409 SUPERFAMILY SSF116734 5 205 5.56E-35 T 11-10-2018 XFUD_11845 d12274ccf800dedff71c68c7ebdc001f 409 SUPERFAMILY SSF116734 216 406 1.47E-37 T 11-10-2018 XFUD_11845 d12274ccf800dedff71c68c7ebdc001f 409 Pfam PF01420 Type I restriction modification DNA specificity domain 218 388 3.0E-27 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XFUD_11845 d12274ccf800dedff71c68c7ebdc001f 409 Pfam PF01420 Type I restriction modification DNA specificity domain 14 189 1.9E-14 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 XFUD_11845 d12274ccf800dedff71c68c7ebdc001f 409 Gene3D G3DSA:3.90.220.20 204 381 8.9E-32 T 11-10-2018 XFUD_11845 d12274ccf800dedff71c68c7ebdc001f 409 Gene3D G3DSA:3.90.220.20 2 203 4.5E-31 T 11-10-2018 XFUD_09740 60f23dfbb8d8ab233317da2c2287740b 160 Gene3D G3DSA:2.60.40.790 11 147 1.1E-37 T 11-10-2018 IPR008978 HSP20-like chaperone XFUD_09740 60f23dfbb8d8ab233317da2c2287740b 160 SUPERFAMILY SSF49764 24 147 9.77E-38 T 11-10-2018 IPR008978 HSP20-like chaperone XFUD_09740 60f23dfbb8d8ab233317da2c2287740b 160 Pfam PF00011 Hsp20/alpha crystallin family 48 147 3.4E-24 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain XFUD_05910 0eefd1adc7f71fc0876c4526280cbb35 316 SUPERFAMILY SSF53795 137 306 1.62E-32 T 11-10-2018 XFUD_05910 0eefd1adc7f71fc0876c4526280cbb35 316 Pfam PF02603 HPr Serine kinase N terminus 5 132 7.0E-25 T 11-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 XFUD_05910 0eefd1adc7f71fc0876c4526280cbb35 316 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 309 4.8E-101 T 11-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 XFUD_05910 0eefd1adc7f71fc0876c4526280cbb35 316 SUPERFAMILY SSF75138 11 136 4.32E-31 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily XFUD_05910 0eefd1adc7f71fc0876c4526280cbb35 316 Gene3D G3DSA:3.40.1390.20 12 134 1.7E-26 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily XFUD_05910 0eefd1adc7f71fc0876c4526280cbb35 316 Gene3D G3DSA:3.40.50.300 135 315 8.1E-61 T 11-10-2018 XFUD_05910 0eefd1adc7f71fc0876c4526280cbb35 316 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 4 314 35.898 T 11-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 XFUD_05910 0eefd1adc7f71fc0876c4526280cbb35 316 Pfam PF07475 HPr Serine kinase C-terminal domain 136 306 9.8E-57 T 11-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 XFUD_04005 0bfced99ad6d1ab33a36cf4735c2fa53 617 Gene3D G3DSA:3.40.50.300 6 205 6.9E-43 T 11-10-2018 XFUD_04005 0bfced99ad6d1ab33a36cf4735c2fa53 617 Pfam PF07670 Nucleoside recognition 284 378 1.6E-11 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 XFUD_04005 0bfced99ad6d1ab33a36cf4735c2fa53 617 Pfam PF07670 Nucleoside recognition 453 586 1.4E-24 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 XFUD_04005 0bfced99ad6d1ab33a36cf4735c2fa53 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 29 47 2.4E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_04005 0bfced99ad6d1ab33a36cf4735c2fa53 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 8 28 2.4E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_04005 0bfced99ad6d1ab33a36cf4735c2fa53 617 SUPERFAMILY SSF52540 3 168 7.38E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_04005 0bfced99ad6d1ab33a36cf4735c2fa53 617 Pfam PF02421 Ferrous iron transport protein B 7 166 1.5E-53 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 XFUD_04005 0bfced99ad6d1ab33a36cf4735c2fa53 617 Pfam PF07664 Ferrous iron transport protein B C terminus 396 448 1.6E-15 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 XFUD_10900 57d4937683e2d1351604f7e1c6cb4ec5 843 Pfam PF08706 D5 N terminal like 373 530 2.8E-36 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XFUD_10900 57d4937683e2d1351604f7e1c6cb4ec5 843 SMART SM00885 372 531 1.5E-53 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XFUD_10900 57d4937683e2d1351604f7e1c6cb4ec5 843 Pfam PF03288 Poxvirus D5 protein-like 751 818 4.6E-5 T 11-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal XFUD_10900 57d4937683e2d1351604f7e1c6cb4ec5 843 SUPERFAMILY SSF52540 528 689 1.46E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_10900 57d4937683e2d1351604f7e1c6cb4ec5 843 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 480 802 3.8E-81 T 11-10-2018 IPR006500 DNA primase, phage/plasmid XFUD_04620 059bdc2524f0c31bdce729df80ce0eb4 158 SMART SM00855 3 114 2.1E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XFUD_04620 059bdc2524f0c31bdce729df80ce0eb4 158 Gene3D G3DSA:3.40.50.1240 1 158 8.9E-38 T 11-10-2018 IPR029033 Histidine phosphatase superfamily XFUD_04620 059bdc2524f0c31bdce729df80ce0eb4 158 SUPERFAMILY SSF53254 1 141 1.19E-26 T 11-10-2018 IPR029033 Histidine phosphatase superfamily XFUD_04620 059bdc2524f0c31bdce729df80ce0eb4 158 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 92 1.1E-12 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XFUD_01025 d9ef1d97d6eed058874d4ac93d0be155 86 Gene3D G3DSA:1.10.287.10 2 86 2.3E-33 T 11-10-2018 XFUD_01025 d9ef1d97d6eed058874d4ac93d0be155 86 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 86 21.234 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_01025 d9ef1d97d6eed058874d4ac93d0be155 86 Pfam PF00312 Ribosomal protein S15 6 85 6.2E-36 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_01025 d9ef1d97d6eed058874d4ac93d0be155 86 SMART SM01387 5 85 5.1E-47 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_01025 d9ef1d97d6eed058874d4ac93d0be155 86 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 3 86 1.8E-36 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_01025 d9ef1d97d6eed058874d4ac93d0be155 86 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 8 85 1.0E-38 T 11-10-2018 XFUD_01025 d9ef1d97d6eed058874d4ac93d0be155 86 ProSitePatterns PS00362 Ribosomal protein S15 signature. 36 66 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_01025 d9ef1d97d6eed058874d4ac93d0be155 86 SUPERFAMILY SSF47060 4 86 1.18E-33 T 11-10-2018 IPR009068 S15/NS1, RNA-binding XFUD_11490 fc45f41a2fe969b22e4484bfdafe88ac 185 Gene3D G3DSA:3.30.70.940 1 125 4.5E-39 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XFUD_11490 fc45f41a2fe969b22e4484bfdafe88ac 185 SMART SM00738 1 119 2.5E-41 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XFUD_11490 fc45f41a2fe969b22e4484bfdafe88ac 185 Gene3D G3DSA:2.30.30.30 126 184 1.9E-23 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 XFUD_11490 fc45f41a2fe969b22e4484bfdafe88ac 185 SMART SM00739 131 158 4.2E-4 T 11-10-2018 IPR005824 KOW XFUD_11490 fc45f41a2fe969b22e4484bfdafe88ac 185 SUPERFAMILY SSF50104 129 184 6.02E-18 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily XFUD_11490 fc45f41a2fe969b22e4484bfdafe88ac 185 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 4.9E-17 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XFUD_11490 fc45f41a2fe969b22e4484bfdafe88ac 185 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 4.9E-17 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XFUD_11490 fc45f41a2fe969b22e4484bfdafe88ac 185 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 4.9E-17 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XFUD_11490 fc45f41a2fe969b22e4484bfdafe88ac 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 185 23.346 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XFUD_11490 fc45f41a2fe969b22e4484bfdafe88ac 185 Pfam PF02357 Transcription termination factor nusG 2 116 9.6E-23 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XFUD_11490 fc45f41a2fe969b22e4484bfdafe88ac 185 SUPERFAMILY SSF82679 2 122 4.84E-33 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 XFUD_11490 fc45f41a2fe969b22e4484bfdafe88ac 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site XFUD_11490 fc45f41a2fe969b22e4484bfdafe88ac 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 184 5.1E-59 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 XFUD_11490 fc45f41a2fe969b22e4484bfdafe88ac 185 Pfam PF00467 KOW motif 134 164 2.4E-6 T 11-10-2018 IPR005824 KOW XFUD_11495 d3ad9ed508c8e3a8e8c5792967173c74 135 Gene3D G3DSA:1.20.5.1030 76 132 8.4E-16 T 11-10-2018 IPR038379 SecE superfamily XFUD_11495 d3ad9ed508c8e3a8e8c5792967173c74 135 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 81 132 4.6E-17 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFUD_11495 d3ad9ed508c8e3a8e8c5792967173c74 135 PRINTS PR01650 Bacterial translocase SecE signature 54 75 2.0E-13 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XFUD_11495 d3ad9ed508c8e3a8e8c5792967173c74 135 PRINTS PR01650 Bacterial translocase SecE signature 75 95 2.0E-13 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XFUD_11495 d3ad9ed508c8e3a8e8c5792967173c74 135 PRINTS PR01650 Bacterial translocase SecE signature 99 119 2.0E-13 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XFUD_11495 d3ad9ed508c8e3a8e8c5792967173c74 135 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 81 109 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFUD_11495 d3ad9ed508c8e3a8e8c5792967173c74 135 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 79 133 6.8E-19 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 XFUD_11495 d3ad9ed508c8e3a8e8c5792967173c74 135 Hamap MF_00422 Protein translocase subunit SecE [secE]. 76 131 11.866 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 SUPERFAMILY SSF51120 1282 1439 1.2E-25 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 857 971 3.0E-13 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1229 1273 3.1E-11 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1561 1600 3.3E-10 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1063 1107 3.1E-11 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1395 1439 3.1E-11 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 SUPERFAMILY SSF51120 1448 1597 7.33E-26 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 512 530 1.9E-6 T 11-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 952 973 1.9E-6 T 11-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1289 1307 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 1112 1165 1.3E-11 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 SUPERFAMILY SSF51120 1116 1273 1.07E-25 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1455 1473 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1477 1493 0.46 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1450 1466 0.25 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1284 1300 0.13 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1339 1355 0.1 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 943 959 0.041 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1174 1189 0.12 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 960 977 9.0E-4 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1118 1134 0.25 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 925 941 14.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1007 1023 0.1 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1506 1521 0.12 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1136 1152 0.11 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1302 1318 0.11 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 979 995 0.1 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 SUPERFAMILY SSF51120 967 1107 6.28E-21 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 PRINTS PR00313 NodO calcium binding signature 1136 1144 7.5E-10 T 11-10-2018 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 PRINTS PR00313 NodO calcium binding signature 1008 1016 7.5E-10 T 11-10-2018 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 PRINTS PR00313 NodO calcium binding signature 1154 1163 7.5E-10 T 11-10-2018 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 PRINTS PR00313 NodO calcium binding signature 958 969 7.5E-10 T 11-10-2018 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 SUPERFAMILY SSF103647 449 550 2.22E-7 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 1498 1613 1.1E-29 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 1333 1447 8.5E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 1166 1275 9.4E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 972 1111 2.2E-29 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1123 1141 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 1276 1332 6.1E-13 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_04335 947e9948512bb524a0435c385b57b6f1 1636 Gene3D G3DSA:2.150.10.10 1448 1497 1.2E-10 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal XFUD_09715 787d15ba8d0eee3643ec145e78a09e9d 188 Pfam PF02622 Uncharacterized ACR, COG1678 17 175 4.5E-45 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 XFUD_09715 787d15ba8d0eee3643ec145e78a09e9d 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 6 188 35.868 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 XFUD_09715 787d15ba8d0eee3643ec145e78a09e9d 188 Gene3D G3DSA:3.40.1740.10 3 188 9.1E-62 T 11-10-2018 XFUD_09715 787d15ba8d0eee3643ec145e78a09e9d 188 SUPERFAMILY SSF143456 6 188 3.4E-61 T 11-10-2018 XFUD_09405 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 Pfam PF14561 Tetratricopeptide repeat 203 286 7.2E-19 T 11-10-2018 XFUD_09405 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 SUPERFAMILY SSF48452 136 252 9.25E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_09405 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 Pfam PF14559 Tetratricopeptide repeat 136 193 1.9E-6 T 11-10-2018 XFUD_09405 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 Gene3D G3DSA:3.40.30.10 1 111 1.5E-31 T 11-10-2018 XFUD_09405 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XFUD_09405 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 Pfam PF00085 Thioredoxin 7 111 1.2E-25 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 XFUD_09405 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 SUPERFAMILY SSF52833 5 111 1.27E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_09405 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 Gene3D G3DSA:1.25.40.10 132 195 1.4E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_09405 d2a6a4a6c7d7c4bb0565f1faaef6c816 286 Gene3D G3DSA:1.25.40.10 200 286 6.1E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_04555 6714c892a86277e353b65ed37289061e 127 SUPERFAMILY SSF81343 12 123 8.83E-27 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04555 6714c892a86277e353b65ed37289061e 127 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 117 1.2E-16 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04555 6714c892a86277e353b65ed37289061e 127 Gene3D G3DSA:1.20.1300.10 12 123 2.5E-25 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 XFUD_04555 6714c892a86277e353b65ed37289061e 127 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 18 120 3.4E-28 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 XFUD_08440 dcdd15380826b8916978d856a0a7d4a8 322 SUPERFAMILY SSF110997 244 316 1.7E-13 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XFUD_08440 dcdd15380826b8916978d856a0a7d4a8 322 Gene3D G3DSA:3.30.70.1070 247 318 2.6E-10 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XFUD_08440 dcdd15380826b8916978d856a0a7d4a8 322 Pfam PF05036 Sporulation related domain 101 165 5.1E-11 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 XFUD_08440 dcdd15380826b8916978d856a0a7d4a8 322 Pfam PF05036 Sporulation related domain 247 311 4.5E-14 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 XFUD_08440 dcdd15380826b8916978d856a0a7d4a8 322 SUPERFAMILY SSF110997 103 164 6.15E-7 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 XFUD_10270 e7c13c55ae141ac81a577a000990480d 380 SUPERFAMILY SSF53756 2 370 1.15E-58 T 11-10-2018 XFUD_10270 e7c13c55ae141ac81a577a000990480d 380 Gene3D G3DSA:3.40.50.2000 189 338 2.0E-24 T 11-10-2018 XFUD_10270 e7c13c55ae141ac81a577a000990480d 380 Pfam PF00534 Glycosyl transferases group 1 188 328 4.2E-21 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 XFUD_10270 e7c13c55ae141ac81a577a000990480d 380 Gene3D G3DSA:3.40.50.2000 1 188 5.6E-26 T 11-10-2018 XFUD_10270 e7c13c55ae141ac81a577a000990480d 380 Pfam PF13439 Glycosyltransferase Family 4 14 179 2.4E-18 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XFUD_04790 b3c61fcf2364aadd2115e09ea38ba457 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.9E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_04790 b3c61fcf2364aadd2115e09ea38ba457 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.9E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_04790 b3c61fcf2364aadd2115e09ea38ba457 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.9E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_04790 b3c61fcf2364aadd2115e09ea38ba457 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 6.1E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_04790 b3c61fcf2364aadd2115e09ea38ba457 301 SUPERFAMILY SSF46785 7 86 8.04E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_04790 b3c61fcf2364aadd2115e09ea38ba457 301 Gene3D G3DSA:1.10.10.10 4 91 3.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_04790 b3c61fcf2364aadd2115e09ea38ba457 301 Gene3D G3DSA:3.40.190.10 165 266 3.6E-55 T 11-10-2018 XFUD_04790 b3c61fcf2364aadd2115e09ea38ba457 301 SUPERFAMILY SSF53850 90 298 1.56E-40 T 11-10-2018 XFUD_04790 b3c61fcf2364aadd2115e09ea38ba457 301 Pfam PF03466 LysR substrate binding domain 89 295 5.0E-41 T 11-10-2018 IPR005119 LysR, substrate-binding XFUD_04790 b3c61fcf2364aadd2115e09ea38ba457 301 Gene3D G3DSA:3.40.190.10 93 291 3.6E-55 T 11-10-2018 XFUD_04915 5145fc6c6baa8b44d0fba700c72854e9 65 Gene3D G3DSA:1.10.287.310 1 59 2.6E-23 T 11-10-2018 XFUD_04915 5145fc6c6baa8b44d0fba700c72854e9 65 SUPERFAMILY SSF46561 1 59 2.49E-18 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04915 5145fc6c6baa8b44d0fba700c72854e9 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 59 1.6E-25 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04915 5145fc6c6baa8b44d0fba700c72854e9 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.381 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04915 5145fc6c6baa8b44d0fba700c72854e9 65 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04915 5145fc6c6baa8b44d0fba700c72854e9 65 Pfam PF00831 Ribosomal L29 protein 5 58 2.1E-21 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_09365 a24cb164e4e3fe11c742cfd7f3aea3c8 239 SUPERFAMILY SSF53098 4 180 1.1E-50 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFUD_09365 a24cb164e4e3fe11c742cfd7f3aea3c8 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 181 6.7E-60 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_09365 a24cb164e4e3fe11c742cfd7f3aea3c8 239 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 6 237 1.9E-100 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_09365 a24cb164e4e3fe11c742cfd7f3aea3c8 239 SMART SM00479 6 179 3.2E-43 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFUD_09365 a24cb164e4e3fe11c742cfd7f3aea3c8 239 Gene3D G3DSA:3.30.420.10 1 183 7.4E-53 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFUD_09365 a24cb164e4e3fe11c742cfd7f3aea3c8 239 Pfam PF00929 Exonuclease 8 170 1.4E-32 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 Gene3D G3DSA:2.40.30.10 268 354 5.0E-23 T 11-10-2018 XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 Gene3D G3DSA:2.40.30.10 356 459 6.3E-33 T 11-10-2018 XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 SUPERFAMILY SSF50447 269 356 9.15E-22 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 487 659 36.628 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 109 124 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 PRINTS PR00315 GTP-binding elongation factor signature 55 68 1.0E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 PRINTS PR00315 GTP-binding elongation factor signature 152 163 1.0E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 PRINTS PR00315 GTP-binding elongation factor signature 116 124 1.0E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 PRINTS PR00315 GTP-binding elongation factor signature 136 146 1.0E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 PRINTS PR00315 GTP-binding elongation factor signature 189 198 1.0E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 SUPERFAMILY SSF52540 485 655 9.88E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 Gene3D G3DSA:3.40.50.300 31 264 4.3E-69 T 11-10-2018 XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 SUPERFAMILY SSF52540 45 260 2.18E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 Pfam PF01583 Adenylylsulphate kinase 489 641 3.9E-67 T 11-10-2018 XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 Gene3D G3DSA:3.40.50.300 465 658 5.9E-72 T 11-10-2018 XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 45 488 52.36 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 SUPERFAMILY SSF50465 357 458 3.02E-31 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 476 654 1.6E-71 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 Pfam PF00009 Elongation factor Tu GTP binding domain 53 252 8.1E-41 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_06335 ff8d215641c28466d50c8c30024bd5f7 660 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 54 458 8.7E-195 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 XFUD_04055 8e7ccc44bbb455677a67691bb9eedbe4 417 PIRSF PIRSF000412 3 416 3.2E-164 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XFUD_04055 8e7ccc44bbb455677a67691bb9eedbe4 417 SUPERFAMILY SSF53383 7 416 2.61E-174 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFUD_04055 8e7ccc44bbb455677a67691bb9eedbe4 417 Gene3D G3DSA:3.90.1150.10 11 393 8.8E-183 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFUD_04055 8e7ccc44bbb455677a67691bb9eedbe4 417 Pfam PF00464 Serine hydroxymethyltransferase 9 386 1.4E-177 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XFUD_04055 8e7ccc44bbb455677a67691bb9eedbe4 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XFUD_04055 8e7ccc44bbb455677a67691bb9eedbe4 417 Gene3D G3DSA:3.40.640.10 37 289 8.8E-183 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFUD_04055 8e7ccc44bbb455677a67691bb9eedbe4 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 51.664 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 XFUD_05790 f21797e1f32c9f18813a9e8dfa45592c 268 Pfam PF00290 Tryptophan synthase alpha chain 8 246 3.4E-81 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFUD_05790 f21797e1f32c9f18813a9e8dfa45592c 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 245 1.2E-69 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFUD_05790 f21797e1f32c9f18813a9e8dfa45592c 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFUD_05790 f21797e1f32c9f18813a9e8dfa45592c 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 263 33.631 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFUD_05790 f21797e1f32c9f18813a9e8dfa45592c 268 SUPERFAMILY SSF51366 1 243 1.41E-83 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XFUD_05790 f21797e1f32c9f18813a9e8dfa45592c 268 Gene3D G3DSA:3.20.20.70 1 268 1.8E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_04785 69d90775e27cde3bc5324539e47a56a9 455 Pfam PF01523 Putative modulator of DNA gyrase 39 331 1.6E-52 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 XFUD_04785 69d90775e27cde3bc5324539e47a56a9 455 Gene3D G3DSA:3.30.2290.10 10 239 5.7E-83 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal XFUD_04785 69d90775e27cde3bc5324539e47a56a9 455 SUPERFAMILY SSF111283 20 454 1.07E-115 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 XFUD_07380 da653a47a2e3a8714427b1ba322b5c91 332 Gene3D G3DSA:3.20.20.100 5 327 2.9E-110 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XFUD_07380 da653a47a2e3a8714427b1ba322b5c91 332 SUPERFAMILY SSF51430 6 321 2.62E-96 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XFUD_07380 da653a47a2e3a8714427b1ba322b5c91 332 Pfam PF00248 Aldo/keto reductase family 18 319 1.7E-75 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain XFUD_10540 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 Gene3D G3DSA:3.40.50.720 282 617 9.2E-106 T 11-10-2018 XFUD_10540 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 Gene3D G3DSA:3.40.50.720 144 268 5.5E-30 T 11-10-2018 XFUD_10540 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 Pfam PF13727 CoA-binding domain 68 242 4.0E-12 T 11-10-2018 XFUD_10540 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 Pfam PF02719 Polysaccharide biosynthesis protein 287 570 3.5E-112 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain XFUD_10540 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 SUPERFAMILY SSF51735 285 553 2.13E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_10540 8a8d62791ddd2af7a97bc7cdbe66c7f3 635 SUPERFAMILY SSF53335 129 322 2.99E-12 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_02845 21048f12ed6ea285c4e3933dfd8c94e4 472 Gene3D G3DSA:3.40.50.10810 4 220 7.6E-23 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily XFUD_02845 21048f12ed6ea285c4e3933dfd8c94e4 472 SUPERFAMILY SSF52540 2 200 3.94E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_02845 21048f12ed6ea285c4e3933dfd8c94e4 472 SMART SM00487 2 188 1.3E-6 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_02845 21048f12ed6ea285c4e3933dfd8c94e4 472 Gene3D G3DSA:3.40.50.300 243 468 5.8E-17 T 11-10-2018 XFUD_02845 21048f12ed6ea285c4e3933dfd8c94e4 472 Pfam PF00176 SNF2 family N-terminal domain 25 264 1.3E-16 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 XFUD_02845 21048f12ed6ea285c4e3933dfd8c94e4 472 SUPERFAMILY SSF52540 117 456 8.44E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_08275 47be116913b5d837f2df4bcbd8feada3 157 SUPERFAMILY SSF117070 11 129 3.66E-7 T 11-10-2018 XFUD_09910 95bdfa20df0bc24bab7d46925c21a034 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 246 4.4E-60 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 XFUD_09910 95bdfa20df0bc24bab7d46925c21a034 323 PRINTS PR01713 Nucleotide sugar epimerase signature 214 229 2.6E-23 T 11-10-2018 XFUD_09910 95bdfa20df0bc24bab7d46925c21a034 323 PRINTS PR01713 Nucleotide sugar epimerase signature 240 255 2.6E-23 T 11-10-2018 XFUD_09910 95bdfa20df0bc24bab7d46925c21a034 323 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 2.6E-23 T 11-10-2018 XFUD_09910 95bdfa20df0bc24bab7d46925c21a034 323 PRINTS PR01713 Nucleotide sugar epimerase signature 279 296 2.6E-23 T 11-10-2018 XFUD_09910 95bdfa20df0bc24bab7d46925c21a034 323 Gene3D G3DSA:3.90.25.10 178 312 3.2E-94 T 11-10-2018 XFUD_09910 95bdfa20df0bc24bab7d46925c21a034 323 Gene3D G3DSA:3.40.50.720 4 300 3.2E-94 T 11-10-2018 XFUD_09910 95bdfa20df0bc24bab7d46925c21a034 323 SUPERFAMILY SSF51735 1 317 9.75E-91 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_11090 b956db87539c1905abcdbcab7abf9480 148 Gene3D G3DSA:3.30.700.10 7 146 6.0E-29 T 11-10-2018 XFUD_11090 b956db87539c1905abcdbcab7abf9480 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.3E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_11090 b956db87539c1905abcdbcab7abf9480 148 Pfam PF00114 Pilin (bacterial filament) 35 145 1.5E-24 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XFUD_11090 b956db87539c1905abcdbcab7abf9480 148 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_11090 b956db87539c1905abcdbcab7abf9480 148 SUPERFAMILY SSF54523 7 146 1.2E-27 T 11-10-2018 XFUD_11090 b956db87539c1905abcdbcab7abf9480 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 5.4E-12 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_10045 a0f9538b0b7e15018b22d7ddff3809b2 621 Gene3D G3DSA:3.40.1440.10 10 106 7.6E-29 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 XFUD_10045 a0f9538b0b7e15018b22d7ddff3809b2 621 Pfam PF01541 GIY-YIG catalytic domain 23 97 2.9E-7 T 11-10-2018 IPR000305 GIY-YIG endonuclease XFUD_10045 a0f9538b0b7e15018b22d7ddff3809b2 621 Gene3D G3DSA:1.10.150.20 553 607 1.0E-20 T 11-10-2018 XFUD_10045 a0f9538b0b7e15018b22d7ddff3809b2 621 SUPERFAMILY SSF82771 20 104 1.57E-19 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 XFUD_10045 a0f9538b0b7e15018b22d7ddff3809b2 621 Gene3D G3DSA:3.30.420.340 375 550 6.3E-47 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily XFUD_10045 a0f9538b0b7e15018b22d7ddff3809b2 621 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 384 540 1.6E-47 T 11-10-2018 IPR001162 UvrC family homology region XFUD_10045 a0f9538b0b7e15018b22d7ddff3809b2 621 SMART SM00465 21 102 1.1E-16 T 11-10-2018 IPR000305 GIY-YIG endonuclease XFUD_10045 a0f9538b0b7e15018b22d7ddff3809b2 621 SUPERFAMILY SSF47781 521 607 6.35E-20 T 11-10-2018 IPR010994 RuvA domain 2-like XFUD_10045 a0f9538b0b7e15018b22d7ddff3809b2 621 SUPERFAMILY SSF46600 193 246 1.14E-11 T 11-10-2018 IPR036876 UVR domain superfamily XFUD_10045 a0f9538b0b7e15018b22d7ddff3809b2 621 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 605 26.68 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 XFUD_10045 a0f9538b0b7e15018b22d7ddff3809b2 621 SMART SM00278 586 605 88.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XFUD_10045 a0f9538b0b7e15018b22d7ddff3809b2 621 SMART SM00278 554 573 7.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 XFUD_10045 a0f9538b0b7e15018b22d7ddff3809b2 621 Pfam PF02151 UvrB/uvrC motif 210 240 5.7E-7 T 11-10-2018 IPR001943 UVR domain GO:0005515 XFUD_10045 a0f9538b0b7e15018b22d7ddff3809b2 621 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 16 585 1.1E-176 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 XFUD_11705 5fdc6e4ae3625a0b94c5fe21e79b994d 282 SUPERFAMILY SSF52172 142 278 1.85E-24 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_11705 5fdc6e4ae3625a0b94c5fe21e79b994d 282 Pfam PF00072 Response regulator receiver domain 145 266 2.8E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11705 5fdc6e4ae3625a0b94c5fe21e79b994d 282 Pfam PF00072 Response regulator receiver domain 18 130 1.9E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11705 5fdc6e4ae3625a0b94c5fe21e79b994d 282 Gene3D G3DSA:3.40.50.2300 140 277 1.4E-22 T 11-10-2018 XFUD_11705 5fdc6e4ae3625a0b94c5fe21e79b994d 282 SUPERFAMILY SSF52172 15 136 2.7E-20 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_11705 5fdc6e4ae3625a0b94c5fe21e79b994d 282 SMART SM00448 143 266 4.8E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11705 5fdc6e4ae3625a0b94c5fe21e79b994d 282 SMART SM00448 16 131 5.4E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11705 5fdc6e4ae3625a0b94c5fe21e79b994d 282 Gene3D G3DSA:3.40.50.2300 4 139 1.0E-17 T 11-10-2018 XFUD_01945 4becce32456c8b8dcacabdd04699bece 522 Pfam PF12792 CSS motif domain associated with EAL 37 232 3.9E-34 T 11-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain XFUD_01945 4becce32456c8b8dcacabdd04699bece 522 SMART SM00052 263 507 5.6E-91 T 11-10-2018 IPR001633 EAL domain XFUD_01945 4becce32456c8b8dcacabdd04699bece 522 Gene3D G3DSA:3.20.20.450 266 520 9.5E-85 T 11-10-2018 IPR035919 EAL domain superfamily XFUD_01945 4becce32456c8b8dcacabdd04699bece 522 Pfam PF00563 EAL domain 270 502 4.7E-68 T 11-10-2018 IPR001633 EAL domain XFUD_01945 4becce32456c8b8dcacabdd04699bece 522 SUPERFAMILY SSF141868 269 515 1.14E-78 T 11-10-2018 IPR035919 EAL domain superfamily XFUD_01060 f67c1cecefdaaff05b1598fdd8b1df5b 360 Gene3D G3DSA:2.40.50.100 50 196 5.8E-55 T 11-10-2018 XFUD_01060 f67c1cecefdaaff05b1598fdd8b1df5b 360 Gene3D G3DSA:2.40.30.170 36 271 5.8E-55 T 11-10-2018 XFUD_01060 f67c1cecefdaaff05b1598fdd8b1df5b 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 27 346 4.0E-87 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 XFUD_01060 f67c1cecefdaaff05b1598fdd8b1df5b 360 SUPERFAMILY SSF111369 40 169 1.57E-9 T 11-10-2018 XFUD_01060 f67c1cecefdaaff05b1598fdd8b1df5b 360 Pfam PF13437 HlyD family secretion protein 162 261 8.0E-6 T 11-10-2018 XFUD_01060 f67c1cecefdaaff05b1598fdd8b1df5b 360 Gene3D G3DSA:1.10.287.470 84 157 5.8E-55 T 11-10-2018 XFUD_01060 f67c1cecefdaaff05b1598fdd8b1df5b 360 Gene3D G3DSA:2.40.420.20 30 345 5.8E-55 T 11-10-2018 XFUD_01060 f67c1cecefdaaff05b1598fdd8b1df5b 360 Pfam PF13533 Biotin-lipoyl like 59 98 2.3E-6 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 PIRSF PIRSF036459 1 868 0.0 T 11-10-2018 IPR011246 Bifunctional diaminopimelate decarboxylase/aspartate kinase XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:2.40.37.10 510 867 6.9E-95 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 ProSitePatterns PS00324 Aspartokinase signature. 12 20 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 641 650 1.7E-13 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 772 790 1.7E-13 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 855 868 1.7E-13 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 555 572 1.7E-13 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF53633 9 305 2.09E-57 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 Pfam PF00696 Amino acid kinase family 10 291 1.5E-41 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF55021 313 405 2.59E-11 T 11-10-2018 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 697 713 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 9 460 7.4E-82 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:3.20.20.10 516 758 6.9E-95 T 11-10-2018 IPR029066 PLP-binding barrel XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 515 845 1.1E-20 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF51419 510 756 8.58E-56 T 11-10-2018 IPR029066 PLP-binding barrel XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:3.30.70.260 317 456 1.4E-34 T 11-10-2018 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF55021 388 462 2.21E-9 T 11-10-2018 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 SUPERFAMILY SSF50621 734 866 1.34E-41 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 519 754 6.6E-41 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 509 867 5.3E-90 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 537 555 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 744 763 4.9E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 537 555 4.9E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 666 679 4.9E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 845 858 4.9E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 557 569 4.9E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:3.30.70.260 323 395 1.4E-34 T 11-10-2018 XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:3.40.1160.10 12 303 2.8E-70 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFUD_04725 5ead2987bccafe3d7df4a51c19513812 868 Gene3D G3DSA:1.20.120.1320 52 141 2.8E-70 T 11-10-2018 XFUD_04195 8920610cf4e07908ceb80160917c2115 208 SUPERFAMILY SSF53335 17 192 2.37E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_04195 8920610cf4e07908ceb80160917c2115 208 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 14 192 2.5E-42 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 XFUD_04195 8920610cf4e07908ceb80160917c2115 208 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XFUD_04195 8920610cf4e07908ceb80160917c2115 208 Pfam PF03602 Conserved hypothetical protein 95 17 192 7.6E-55 T 11-10-2018 XFUD_04195 8920610cf4e07908ceb80160917c2115 208 Gene3D G3DSA:3.40.50.150 10 196 1.5E-53 T 11-10-2018 XFUD_04195 8920610cf4e07908ceb80160917c2115 208 PIRSF PIRSF004553 16 194 1.2E-42 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 XFUD_07510 390fa3d516affab08c3f810427a2e6e9 372 Gene3D G3DSA:3.40.50.1820 74 352 3.6E-123 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_07510 390fa3d516affab08c3f810427a2e6e9 372 SUPERFAMILY SSF53474 47 368 1.09E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_07510 390fa3d516affab08c3f810427a2e6e9 372 Pfam PF05448 Acetyl xylan esterase (AXE1) 155 206 1.7E-6 T 11-10-2018 IPR008391 Acetyl xylan esterase XFUD_07510 390fa3d516affab08c3f810427a2e6e9 372 Gene3D G3DSA:1.10.10.800 207 297 3.6E-123 T 11-10-2018 XFUD_09330 e7d974607f578dc6e4d90cb7aa564940 292 Pfam PF00149 Calcineurin-like phosphoesterase 1 142 8.9E-14 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 XFUD_09330 e7d974607f578dc6e4d90cb7aa564940 292 Gene3D G3DSA:3.60.21.10 1 270 5.7E-67 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like XFUD_09330 e7d974607f578dc6e4d90cb7aa564940 292 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 43.343 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 XFUD_09330 e7d974607f578dc6e4d90cb7aa564940 292 SUPERFAMILY SSF56300 1 272 1.98E-48 T 11-10-2018 XFUD_09330 e7d974607f578dc6e4d90cb7aa564940 292 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 259 2.4E-78 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 XFUD_09330 e7d974607f578dc6e4d90cb7aa564940 292 PIRSF PIRSF000903 1 275 6.1E-114 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 XFUD_05975 29772d836184046de40946a754a6756e 294 Gene3D G3DSA:2.160.10.10 154 218 1.5E-9 T 11-10-2018 XFUD_05975 29772d836184046de40946a754a6756e 294 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 147 4.5E-6 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_05975 29772d836184046de40946a754a6756e 294 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 68 98 3.5E-5 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_05975 29772d836184046de40946a754a6756e 294 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 235 267 2.0E-5 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_05975 29772d836184046de40946a754a6756e 294 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 155 189 9.7E-4 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_05975 29772d836184046de40946a754a6756e 294 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 236 264 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XFUD_05975 29772d836184046de40946a754a6756e 294 Gene3D G3DSA:2.160.10.10 219 293 9.7E-10 T 11-10-2018 XFUD_05975 29772d836184046de40946a754a6756e 294 SUPERFAMILY SSF51161 39 278 8.58E-37 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFUD_05975 29772d836184046de40946a754a6756e 294 Gene3D G3DSA:2.160.10.10 22 98 3.2E-10 T 11-10-2018 XFUD_05975 29772d836184046de40946a754a6756e 294 Gene3D G3DSA:2.160.10.10 99 153 2.9E-8 T 11-10-2018 XFUD_04945 07da55ad3051ac3cce0aae151835006c 175 PIRSF PIRSF002162 1 175 7.6E-46 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04945 07da55ad3051ac3cce0aae151835006c 175 Gene3D G3DSA:3.90.930.12 1 80 5.9E-21 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04945 07da55ad3051ac3cce0aae151835006c 175 Gene3D G3DSA:3.90.930.12 81 175 1.1E-37 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04945 07da55ad3051ac3cce0aae151835006c 175 PRINTS PR00059 Ribosomal protein L6 signature 139 160 2.3E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XFUD_04945 07da55ad3051ac3cce0aae151835006c 175 PRINTS PR00059 Ribosomal protein L6 signature 69 94 2.3E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XFUD_04945 07da55ad3051ac3cce0aae151835006c 175 PRINTS PR00059 Ribosomal protein L6 signature 97 113 2.3E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XFUD_04945 07da55ad3051ac3cce0aae151835006c 175 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 152 160 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04945 07da55ad3051ac3cce0aae151835006c 175 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 174 36.121 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XFUD_04945 07da55ad3051ac3cce0aae151835006c 175 SUPERFAMILY SSF56053 81 174 2.19E-34 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04945 07da55ad3051ac3cce0aae151835006c 175 SUPERFAMILY SSF56053 1 80 1.77E-18 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04945 07da55ad3051ac3cce0aae151835006c 175 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 174 9.0E-68 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 XFUD_04945 07da55ad3051ac3cce0aae151835006c 175 Pfam PF00347 Ribosomal protein L6 11 79 7.6E-13 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04945 07da55ad3051ac3cce0aae151835006c 175 Pfam PF00347 Ribosomal protein L6 88 162 9.1E-20 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_02635 7fbacfed7bf73b0fbc18003b7b7a92df 452 Pfam PF13481 AAA domain 112 287 4.8E-28 T 11-10-2018 XFUD_02635 7fbacfed7bf73b0fbc18003b7b7a92df 452 SUPERFAMILY SSF52540 122 320 9.27E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_02635 7fbacfed7bf73b0fbc18003b7b7a92df 452 Gene3D G3DSA:3.40.50.300 104 372 1.4E-36 T 11-10-2018 XFUD_10525 8c30cea6e6d757e2c52defe9f5d1c17f 485 Gene3D G3DSA:3.20.20.70 1 484 6.5E-208 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_10525 8c30cea6e6d757e2c52defe9f5d1c17f 485 Pfam PF00571 CBS domain 148 202 1.0E-5 T 11-10-2018 IPR000644 CBS domain XFUD_10525 8c30cea6e6d757e2c52defe9f5d1c17f 485 Pfam PF00571 CBS domain 95 139 5.1E-11 T 11-10-2018 IPR000644 CBS domain XFUD_10525 8c30cea6e6d757e2c52defe9f5d1c17f 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 471 2.8E-156 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 XFUD_10525 8c30cea6e6d757e2c52defe9f5d1c17f 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 XFUD_10525 8c30cea6e6d757e2c52defe9f5d1c17f 485 SMART SM00116 96 143 2.5E-11 T 11-10-2018 IPR000644 CBS domain XFUD_10525 8c30cea6e6d757e2c52defe9f5d1c17f 485 SMART SM00116 157 205 4.1E-7 T 11-10-2018 IPR000644 CBS domain XFUD_10525 8c30cea6e6d757e2c52defe9f5d1c17f 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 452 1.8E-186 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 XFUD_10525 8c30cea6e6d757e2c52defe9f5d1c17f 485 PIRSF PIRSF000130 1 485 7.0E-201 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 XFUD_10525 8c30cea6e6d757e2c52defe9f5d1c17f 485 SUPERFAMILY SSF51412 2 475 2.49E-125 T 11-10-2018 XFUD_10525 8c30cea6e6d757e2c52defe9f5d1c17f 485 SMART SM01240 7 471 0.0 T 11-10-2018 XFUD_10525 8c30cea6e6d757e2c52defe9f5d1c17f 485 SUPERFAMILY SSF54631 94 202 1.89E-27 T 11-10-2018 XFUD_10525 8c30cea6e6d757e2c52defe9f5d1c17f 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 484 80.752 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 XFUD_08735 4e8eade3139bd6cc5e072717adcdd861 215 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 5 210 3.5E-66 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 XFUD_08735 4e8eade3139bd6cc5e072717adcdd861 215 SUPERFAMILY SSF100950 2 144 2.09E-43 T 11-10-2018 IPR037171 NagB/RpiA transferase-like XFUD_08735 4e8eade3139bd6cc5e072717adcdd861 215 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 47 210 1.7E-56 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 XFUD_08735 4e8eade3139bd6cc5e072717adcdd861 215 Gene3D G3DSA:3.30.70.260 123 195 1.5E-75 T 11-10-2018 XFUD_08735 4e8eade3139bd6cc5e072717adcdd861 215 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 215 32.255 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 XFUD_08735 4e8eade3139bd6cc5e072717adcdd861 215 Gene3D G3DSA:3.40.50.1360 5 206 1.5E-75 T 11-10-2018 XFUD_08735 4e8eade3139bd6cc5e072717adcdd861 215 SUPERFAMILY SSF75445 125 197 2.49E-22 T 11-10-2018 XFUD_10740 0f303040f79f022fcbbe09b59c7320fe 252 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 6 242 4.2E-66 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 XFUD_10740 0f303040f79f022fcbbe09b59c7320fe 252 PIRSF PIRSF004808 3 249 9.1E-72 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 XFUD_10740 0f303040f79f022fcbbe09b59c7320fe 252 Gene3D G3DSA:3.40.1280.10 3 168 9.6E-62 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XFUD_10740 0f303040f79f022fcbbe09b59c7320fe 252 Pfam PF00588 SpoU rRNA Methylase family 7 157 2.4E-36 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 XFUD_10740 0f303040f79f022fcbbe09b59c7320fe 252 Gene3D G3DSA:1.10.8.590 180 242 3.8E-19 T 11-10-2018 XFUD_10740 0f303040f79f022fcbbe09b59c7320fe 252 SUPERFAMILY SSF75217 5 164 2.29E-36 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases XFUD_02470 67a229f8753a66d5b67f9d742171b744 340 Gene3D G3DSA:3.90.1200.10 99 337 3.2E-62 T 11-10-2018 XFUD_02470 67a229f8753a66d5b67f9d742171b744 340 Gene3D G3DSA:3.30.200.20 7 98 8.6E-18 T 11-10-2018 XFUD_02470 67a229f8753a66d5b67f9d742171b744 340 SUPERFAMILY SSF56112 17 309 3.64E-44 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily XFUD_02470 67a229f8753a66d5b67f9d742171b744 340 Pfam PF01636 Phosphotransferase enzyme family 30 250 7.2E-28 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase XFUD_06110 da0939b615a6a681c170a0b66012bca5 214 SUPERFAMILY SSF89392 31 212 8.63E-39 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX XFUD_06110 da0939b615a6a681c170a0b66012bca5 214 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 14 213 29.396 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 XFUD_06110 da0939b615a6a681c170a0b66012bca5 214 Gene3D G3DSA:2.50.20.10 29 214 3.3E-40 T 11-10-2018 XFUD_06110 da0939b615a6a681c170a0b66012bca5 214 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 203 2.9E-47 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like XFUD_07445 5979db0f10c57a595c5102efe343c8c6 242 SUPERFAMILY SSF51735 33 227 1.27E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_07445 5979db0f10c57a595c5102efe343c8c6 242 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 34 125 1.2E-19 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal XFUD_07445 5979db0f10c57a595c5102efe343c8c6 242 Gene3D G3DSA:3.40.50.720 30 224 5.4E-44 T 11-10-2018 XFUD_04950 1f5e04831da1c10dd7bdd58d782eaac4 119 Gene3D G3DSA:3.30.420.100 3 119 1.2E-36 T 11-10-2018 XFUD_04950 1f5e04831da1c10dd7bdd58d782eaac4 119 SUPERFAMILY SSF53137 5 117 1.81E-44 T 11-10-2018 XFUD_04950 1f5e04831da1c10dd7bdd58d782eaac4 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 5 119 9.5E-35 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04950 1f5e04831da1c10dd7bdd58d782eaac4 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 4 119 24.957 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04950 1f5e04831da1c10dd7bdd58d782eaac4 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 119 2.6E-33 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_10685 514df20b35fad58de330c34c8a4befb8 144 Pfam PF03918 Cytochrome C biogenesis protein 24 134 1.2E-41 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family XFUD_10685 514df20b35fad58de330c34c8a4befb8 144 Gene3D G3DSA:1.10.8.640 26 108 1.7E-29 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily XFUD_10295 9c7276982d4516c96b7ee40e4088bdd5 228 Pfam PF10531 SLBB domain 123 175 4.3E-10 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_10295 9c7276982d4516c96b7ee40e4088bdd5 228 Gene3D G3DSA:3.10.560.10 107 204 2.5E-16 T 11-10-2018 XFUD_10295 9c7276982d4516c96b7ee40e4088bdd5 228 Pfam PF02563 Polysaccharide biosynthesis/export protein 42 116 3.5E-18 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 XFUD_05905 5d40d1b1f406050912eaa755f8191ee5 290 Gene3D G3DSA:3.40.50.300 1 149 4.7E-8 T 11-10-2018 XFUD_05905 5d40d1b1f406050912eaa755f8191ee5 290 Pfam PF03668 P-loop ATPase protein family 8 290 1.1E-92 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 XFUD_05905 5d40d1b1f406050912eaa755f8191ee5 290 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 6 290 37.629 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 XFUD_05905 5d40d1b1f406050912eaa755f8191ee5 290 PIRSF PIRSF005052 6 290 5.9E-113 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 XFUD_05905 5d40d1b1f406050912eaa755f8191ee5 290 SUPERFAMILY SSF52540 8 158 2.77E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_04475 df993c6f7e82b89d66b993a5e3e3aa63 226 SUPERFAMILY SSF144091 9 222 3.79E-33 T 11-10-2018 XFUD_04475 df993c6f7e82b89d66b993a5e3e3aa63 226 Gene3D G3DSA:1.20.1540.10 13 223 1.8E-26 T 11-10-2018 IPR035952 Rhomboid-like superfamily XFUD_04475 df993c6f7e82b89d66b993a5e3e3aa63 226 Pfam PF01694 Rhomboid family 64 218 1.2E-34 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 XFUD_02070 ab9898b988a35bba176d9964155e21bc 385 SUPERFAMILY SSF55486 129 354 2.27E-6 T 11-10-2018 XFUD_02070 ab9898b988a35bba176d9964155e21bc 385 Pfam PF06114 IrrE N-terminal-like domain 172 299 1.3E-22 T 11-10-2018 IPR010359 IrrE N-terminal-like domain XFUD_02070 ab9898b988a35bba176d9964155e21bc 385 Gene3D G3DSA:3.40.390.50 158 260 1.2E-9 T 11-10-2018 XFUD_06170 5ae09d746da8de2648ce5272b66ae824 346 Gene3D G3DSA:3.40.50.10490 10 199 4.7E-43 T 11-10-2018 XFUD_06170 5ae09d746da8de2648ce5272b66ae824 346 Pfam PF01380 SIS domain 208 288 2.9E-15 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XFUD_06170 5ae09d746da8de2648ce5272b66ae824 346 Pfam PF01380 SIS domain 53 174 3.9E-17 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XFUD_06170 5ae09d746da8de2648ce5272b66ae824 346 Gene3D G3DSA:3.40.50.10490 204 331 3.7E-40 T 11-10-2018 XFUD_06170 5ae09d746da8de2648ce5272b66ae824 346 SUPERFAMILY SSF53697 15 344 6.34E-69 T 11-10-2018 XFUD_00620 e92ac4ce5bcb5ca0fd371e10f64091e4 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 5.5E-66 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 XFUD_00620 e92ac4ce5bcb5ca0fd371e10f64091e4 224 SUPERFAMILY SSF47781 16 89 1.11E-8 T 11-10-2018 IPR010994 RuvA domain 2-like XFUD_00620 e92ac4ce5bcb5ca0fd371e10f64091e4 224 Gene3D G3DSA:3.40.140.10 101 224 3.1E-40 T 11-10-2018 XFUD_00620 e92ac4ce5bcb5ca0fd371e10f64091e4 224 Pfam PF04002 RadC-like JAB domain 104 222 1.6E-41 T 11-10-2018 IPR025657 RadC-like JAB domain XFUD_00620 e92ac4ce5bcb5ca0fd371e10f64091e4 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 SUPERFAMILY SSF53748 3 387 6.24E-142 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 388 38.196 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 Gene3D G3DSA:3.40.50.1260 8 386 2.8E-143 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 Gene3D G3DSA:3.40.50.1260 165 378 2.8E-143 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 PIRSF PIRSF000724 1 390 1.9E-130 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 Pfam PF00162 Phosphoglycerate kinase 6 378 1.3E-137 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03485 94b2b687629dc7a99405674da159ae7a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 4.1E-79 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_06885 b5fe0b36d21691308fb11ea1ee42dc23 224 SUPERFAMILY SSF53474 13 219 1.26E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_06885 b5fe0b36d21691308fb11ea1ee42dc23 224 Pfam PF02230 Phospholipase/Carboxylesterase 14 217 1.2E-43 T 11-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 XFUD_06885 b5fe0b36d21691308fb11ea1ee42dc23 224 Gene3D G3DSA:3.40.50.1820 3 220 2.9E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_02545 397344fd8e98995e372b5f43902a7f81 305 Gene3D G3DSA:3.90.25.10 178 297 3.4E-84 T 11-10-2018 XFUD_02545 397344fd8e98995e372b5f43902a7f81 305 Pfam PF16363 GDP-mannose 4,6 dehydratase 10 286 2.1E-41 T 11-10-2018 IPR016040 NAD(P)-binding domain XFUD_02545 397344fd8e98995e372b5f43902a7f81 305 Gene3D G3DSA:3.40.50.720 9 290 3.4E-84 T 11-10-2018 XFUD_02545 397344fd8e98995e372b5f43902a7f81 305 SUPERFAMILY SSF51735 3 302 1.44E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_04610 7414c6ba988250b4d06088241ad3a03f 339 SUPERFAMILY SSF52540 54 198 5.42E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_04610 7414c6ba988250b4d06088241ad3a03f 339 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 34 319 9.6E-65 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 XFUD_04610 7414c6ba988250b4d06088241ad3a03f 339 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 8 338 36.009 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 XFUD_04610 7414c6ba988250b4d06088241ad3a03f 339 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 22 333 1.4E-99 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 XFUD_08380 00aba33338d6f8f6f0b746ef9686ff64 262 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 254 8.1E-79 T 11-10-2018 XFUD_08380 00aba33338d6f8f6f0b746ef9686ff64 262 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 211 222 - T 11-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 XFUD_08380 00aba33338d6f8f6f0b746ef9686ff64 262 Gene3D G3DSA:3.60.10.10 1 255 4.3E-69 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XFUD_08380 00aba33338d6f8f6f0b746ef9686ff64 262 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 254 8.5E-76 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 XFUD_08380 00aba33338d6f8f6f0b746ef9686ff64 262 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 247 1.8E-21 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase XFUD_08380 00aba33338d6f8f6f0b746ef9686ff64 262 SUPERFAMILY SSF56219 1 255 2.49E-77 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XFUD_08380 00aba33338d6f8f6f0b746ef9686ff64 262 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 XFUD_07385 46844ea42f6b2641a11681a6f102ac52 329 Pfam PF00248 Aldo/keto reductase family 15 316 1.7E-76 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain XFUD_07385 46844ea42f6b2641a11681a6f102ac52 329 Gene3D G3DSA:3.20.20.100 1 325 7.9E-113 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XFUD_07385 46844ea42f6b2641a11681a6f102ac52 329 SUPERFAMILY SSF51430 1 318 6.15E-99 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XFUD_05785 88485174d2bb83f26f3faccb35626d19 405 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 12 401 50.149 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFUD_05785 88485174d2bb83f26f3faccb35626d19 405 SUPERFAMILY SSF53686 13 398 2.36E-141 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XFUD_05785 88485174d2bb83f26f3faccb35626d19 405 PIRSF PIRSF001413 1 405 4.7E-155 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFUD_05785 88485174d2bb83f26f3faccb35626d19 405 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 91 105 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFUD_05785 88485174d2bb83f26f3faccb35626d19 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 63 388 1.2E-46 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XFUD_05785 88485174d2bb83f26f3faccb35626d19 405 Gene3D G3DSA:3.40.50.1100 20 216 1.6E-177 T 11-10-2018 XFUD_05785 88485174d2bb83f26f3faccb35626d19 405 Gene3D G3DSA:3.40.50.1100 64 394 1.6E-177 T 11-10-2018 XFUD_05785 88485174d2bb83f26f3faccb35626d19 405 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 17 399 1.5E-182 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 XFUD_04355 933331c6ad014d403fa2f3411cc82e0b 254 SUPERFAMILY SSF55729 84 243 1.09E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFUD_04355 933331c6ad014d403fa2f3411cc82e0b 254 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 9 242 37.495 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 XFUD_04355 933331c6ad014d403fa2f3411cc82e0b 254 PIRSF PIRSF037208 2 254 1.8E-90 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 XFUD_04355 933331c6ad014d403fa2f3411cc82e0b 254 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 109 236 4.1E-32 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 XFUD_04355 933331c6ad014d403fa2f3411cc82e0b 254 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 19 89 3.9E-17 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 XFUD_00160 f4dea6324266afd3821a6c5de3f00e90 123 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 2 15 - T 11-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site XFUD_00160 f4dea6324266afd3821a6c5de3f00e90 123 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 122 3.4E-35 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 XFUD_00160 f4dea6324266afd3821a6c5de3f00e90 123 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 123 18.642 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 XFUD_00160 f4dea6324266afd3821a6c5de3f00e90 123 Gene3D G3DSA:1.10.1200.120 1 123 4.1E-34 T 11-10-2018 IPR036019 Gated mechanosensitive channel XFUD_00160 f4dea6324266afd3821a6c5de3f00e90 123 SUPERFAMILY SSF81330 1 118 5.62E-35 T 11-10-2018 IPR036019 Gated mechanosensitive channel XFUD_00160 f4dea6324266afd3821a6c5de3f00e90 123 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 122 1.7E-37 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L XFUD_04930 81b4cb3ecff5b39e1653e87305ea08e7 105 SUPERFAMILY SSF50104 4 102 1.81E-29 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily XFUD_04930 81b4cb3ecff5b39e1653e87305ea08e7 105 SMART SM00739 4 31 2.8E-7 T 11-10-2018 IPR005824 KOW XFUD_04930 81b4cb3ecff5b39e1653e87305ea08e7 105 Pfam PF00467 KOW motif 7 35 5.1E-8 T 11-10-2018 IPR005824 KOW XFUD_04930 81b4cb3ecff5b39e1653e87305ea08e7 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04930 81b4cb3ecff5b39e1653e87305ea08e7 105 Gene3D G3DSA:2.30.30.30 2 104 2.4E-34 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 XFUD_04930 81b4cb3ecff5b39e1653e87305ea08e7 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.273 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04930 81b4cb3ecff5b39e1653e87305ea08e7 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 103 4.1E-23 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04930 81b4cb3ecff5b39e1653e87305ea08e7 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.9E-34 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_01820 85a1326292dc965396e0334f92bdc51f 444 SUPERFAMILY SSF50182 203 270 1.08E-10 T 11-10-2018 IPR010920 LSM domain superfamily XFUD_01820 85a1326292dc965396e0334f92bdc51f 444 Pfam PF00924 Mechanosensitive ion channel 163 415 4.2E-41 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 XFUD_11395 6c74ac9f7daab89474b143bee0dd5308 132 SUPERFAMILY SSF52172 5 121 2.42E-17 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_11395 6c74ac9f7daab89474b143bee0dd5308 132 Gene3D G3DSA:3.40.50.2300 5 124 1.7E-26 T 11-10-2018 XFUD_11395 6c74ac9f7daab89474b143bee0dd5308 132 SMART SM00448 7 115 1.9E-6 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11395 6c74ac9f7daab89474b143bee0dd5308 132 Pfam PF00072 Response regulator receiver domain 9 115 4.2E-7 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_02360 f80869bbc9c084fb5323d46ec7a8821c 246 ProSitePatterns PS01218 TatC family signature. 158 177 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site XFUD_02360 f80869bbc9c084fb5323d46ec7a8821c 246 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 8 244 16.165 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XFUD_02360 f80869bbc9c084fb5323d46ec7a8821c 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 2.3E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XFUD_02360 f80869bbc9c084fb5323d46ec7a8821c 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 2.3E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XFUD_02360 f80869bbc9c084fb5323d46ec7a8821c 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 12 39 2.3E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XFUD_02360 f80869bbc9c084fb5323d46ec7a8821c 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 158 186 2.3E-43 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XFUD_02360 f80869bbc9c084fb5323d46ec7a8821c 246 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 13 230 2.5E-65 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XFUD_02360 f80869bbc9c084fb5323d46ec7a8821c 246 Pfam PF00902 Sec-independent protein translocase protein (TatC) 15 225 5.5E-65 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 XFUD_03135 ff70ff89d24723f68dffd1ef7bc883c1 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.4E-48 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_03135 ff70ff89d24723f68dffd1ef7bc883c1 119 Gene3D G3DSA:1.10.720.90 2 55 2.9E-21 T 11-10-2018 XFUD_03135 ff70ff89d24723f68dffd1ef7bc883c1 119 Pfam PF00453 Ribosomal protein L20 3 109 3.1E-48 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_03135 ff70ff89d24723f68dffd1ef7bc883c1 119 SUPERFAMILY SSF74731 3 117 3.56E-49 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_03135 ff70ff89d24723f68dffd1ef7bc883c1 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.372 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_03135 ff70ff89d24723f68dffd1ef7bc883c1 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.1E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_03135 ff70ff89d24723f68dffd1ef7bc883c1 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.1E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_03135 ff70ff89d24723f68dffd1ef7bc883c1 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.1E-38 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_03135 ff70ff89d24723f68dffd1ef7bc883c1 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_03135 ff70ff89d24723f68dffd1ef7bc883c1 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 2.0E-21 T 11-10-2018 XFUD_03135 ff70ff89d24723f68dffd1ef7bc883c1 119 Gene3D G3DSA:1.10.1900.20 56 118 9.8E-28 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_05525 d71552d154a434e002dda6c16a452468 161 PIRSF PIRSF018472 1 160 2.0E-46 T 11-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type XFUD_05525 d71552d154a434e002dda6c16a452468 161 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 6 151 5.4E-29 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 XFUD_05525 d71552d154a434e002dda6c16a452468 161 Pfam PF04093 rod shape-determining protein MreD 3 152 1.2E-39 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 XFUD_11290 fe3fcb74b6a55ce1a1051fb73b84eefc 452 SUPERFAMILY SSF56954 24 444 3.14E-86 T 11-10-2018 XFUD_11290 fe3fcb74b6a55ce1a1051fb73b84eefc 452 Gene3D G3DSA:1.20.1600.10 22 451 3.0E-109 T 11-10-2018 XFUD_11290 fe3fcb74b6a55ce1a1051fb73b84eefc 452 Pfam PF02321 Outer membrane efflux protein 235 428 1.7E-31 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 XFUD_11290 fe3fcb74b6a55ce1a1051fb73b84eefc 452 Pfam PF02321 Outer membrane efflux protein 24 210 9.3E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 XFUD_11290 fe3fcb74b6a55ce1a1051fb73b84eefc 452 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 444 1.4E-121 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 XFUD_10725 ecde9cf555aa518e8ffbb62e347ecb06 447 SUPERFAMILY SSF51338 12 442 5.19E-21 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XFUD_10725 ecde9cf555aa518e8ffbb62e347ecb06 447 Pfam PF01979 Amidohydrolase family 68 415 2.3E-63 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 XFUD_10725 ecde9cf555aa518e8ffbb62e347ecb06 447 Gene3D G3DSA:2.30.40.10 14 435 1.1E-160 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XFUD_10725 ecde9cf555aa518e8ffbb62e347ecb06 447 SUPERFAMILY SSF51556 70 369 8.93E-94 T 11-10-2018 IPR032466 Metal-dependent hydrolase XFUD_10725 ecde9cf555aa518e8ffbb62e347ecb06 447 Gene3D G3DSA:3.20.20.140 71 361 1.1E-160 T 11-10-2018 XFUD_01185 effe72e019a1eb65766f266294f20f89 455 Gene3D G3DSA:3.40.630.10 134 454 2.3E-116 T 11-10-2018 XFUD_01185 effe72e019a1eb65766f266294f20f89 455 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 7.8E-40 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFUD_01185 effe72e019a1eb65766f266294f20f89 455 PRINTS PR00481 Cytosol aminopeptidase signature 328 343 7.8E-40 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFUD_01185 effe72e019a1eb65766f266294f20f89 455 PRINTS PR00481 Cytosol aminopeptidase signature 219 236 7.8E-40 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFUD_01185 effe72e019a1eb65766f266294f20f89 455 PRINTS PR00481 Cytosol aminopeptidase signature 241 262 7.8E-40 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFUD_01185 effe72e019a1eb65766f266294f20f89 455 PRINTS PR00481 Cytosol aminopeptidase signature 300 320 7.8E-40 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 XFUD_01185 effe72e019a1eb65766f266294f20f89 455 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 304 311 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XFUD_01185 effe72e019a1eb65766f266294f20f89 455 SUPERFAMILY SSF53187 139 453 9.1E-103 T 11-10-2018 XFUD_01185 effe72e019a1eb65766f266294f20f89 455 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 146 428 1.3E-99 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 XFUD_01185 effe72e019a1eb65766f266294f20f89 455 Gene3D G3DSA:3.40.220.10 7 131 9.7E-29 T 11-10-2018 XFUD_01670 b68629e40d642c30b3e47652420c7754 154 Pfam PF00210 Ferritin-like domain 8 144 3.0E-37 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 XFUD_01670 b68629e40d642c30b3e47652420c7754 154 SUPERFAMILY SSF47240 1 152 1.24E-51 T 11-10-2018 IPR009078 Ferritin-like superfamily XFUD_01670 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 65 85 4.7E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFUD_01670 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 44 64 4.7E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFUD_01670 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 128 149 4.7E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFUD_01670 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 107 127 4.7E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFUD_01670 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 3 22 4.7E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFUD_01670 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 23 43 4.7E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFUD_01670 b68629e40d642c30b3e47652420c7754 154 PRINTS PR00601 Bacterioferritin signature 86 106 4.7E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFUD_01670 b68629e40d642c30b3e47652420c7754 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFUD_01670 b68629e40d642c30b3e47652420c7754 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 151 9.6E-70 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFUD_01670 b68629e40d642c30b3e47652420c7754 154 Gene3D G3DSA:1.20.1260.10 1 154 2.7E-66 T 11-10-2018 IPR012347 Ferritin-like XFUD_01670 b68629e40d642c30b3e47652420c7754 154 PIRSF PIRSF002560 1 154 2.8E-69 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 PRINTS PR00315 GTP-binding elongation factor signature 63 71 2.2E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 PRINTS PR00315 GTP-binding elongation factor signature 83 93 2.2E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 PRINTS PR00315 GTP-binding elongation factor signature 13 26 2.2E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 PRINTS PR00315 GTP-binding elongation factor signature 135 144 2.2E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 PRINTS PR00315 GTP-binding elongation factor signature 99 110 2.2E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 512 8.6E-46 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 Pfam PF00009 Elongation factor Tu GTP binding domain 11 276 4.1E-48 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 525 51.892 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 Gene3D G3DSA:3.40.50.300 70 377 4.9E-108 T 11-10-2018 XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 SUPERFAMILY SSF52540 8 276 1.37E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 SUPERFAMILY SSF50447 259 391 2.83E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 151 1.2E-20 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 Gene3D G3DSA:3.30.70.3280 388 527 6.8E-50 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 Gene3D G3DSA:3.40.50.300 108 273 4.9E-108 T 11-10-2018 XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 SUPERFAMILY SSF54980 391 466 3.96E-16 T 11-10-2018 IPR035647 EF-G domain III/V-like XFUD_00745 ab9c8dd2ee3c4db2dc1144e8438ca044 534 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 1 527 1.2E-246 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 XFUD_12320 211448826b79e475ce4e0943a487f154 251 SUPERFAMILY SSF53474 23 243 8.58E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_12320 211448826b79e475ce4e0943a487f154 251 Gene3D G3DSA:3.40.50.1820 21 246 1.0E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_12320 211448826b79e475ce4e0943a487f154 251 Pfam PF12697 Alpha/beta hydrolase family 26 237 7.7E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFUD_06585 d28450ac7999dd60f7a68eb60a5af4b4 79 Gene3D G3DSA:2.40.50.140 1 69 1.6E-8 T 11-10-2018 XFUD_06585 d28450ac7999dd60f7a68eb60a5af4b4 79 SUPERFAMILY SSF50249 8 79 2.26E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_06585 d28450ac7999dd60f7a68eb60a5af4b4 79 Pfam PF00436 Single-strand binding protein family 8 39 2.1E-7 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XFUD_12370 8fa9e8ec79c1c2fc569e691f2ecf97f8 296 Gene3D G3DSA:2.60.40.2500 190 295 8.6E-7 T 11-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily XFUD_12370 8fa9e8ec79c1c2fc569e691f2ecf97f8 296 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 69 282 6.4E-78 T 11-10-2018 IPR014142 P-type conjugative transfer protein TrbG XFUD_12370 8fa9e8ec79c1c2fc569e691f2ecf97f8 296 Pfam PF03524 Conjugal transfer protein 71 294 7.5E-53 T 11-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX XFUD_04635 bf3d8d26d664c4b1c491f770cc92e2e8 161 Gene3D G3DSA:3.40.50.1170 1 159 1.1E-28 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 XFUD_04635 bf3d8d26d664c4b1c491f770cc92e2e8 161 SUPERFAMILY SSF53774 1 152 9.16E-33 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 XFUD_04635 bf3d8d26d664c4b1c491f770cc92e2e8 161 PRINTS PR00139 Asparaginase/glutaminase family signature 75 93 3.0E-5 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XFUD_04635 bf3d8d26d664c4b1c491f770cc92e2e8 161 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 3.0E-5 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 XFUD_04635 bf3d8d26d664c4b1c491f770cc92e2e8 161 Pfam PF00710 Asparaginase, N-terminal 4 152 2.7E-23 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 XFUD_07905 ff92541b38c6da719b7fe77d93f408ce 332 SUPERFAMILY SSF51735 1 326 6.63E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_07905 ff92541b38c6da719b7fe77d93f408ce 332 Gene3D G3DSA:3.40.50.720 1 332 1.0E-75 T 11-10-2018 XFUD_07905 ff92541b38c6da719b7fe77d93f408ce 332 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 4 249 1.1E-49 T 11-10-2018 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 XFUD_01330 c544a1dc9c96d37bac964f15cc18c4c8 250 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 160 181 - T 11-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01330 c544a1dc9c96d37bac964f15cc18c4c8 250 Gene3D G3DSA:3.30.460.80 1 77 8.0E-7 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01330 c544a1dc9c96d37bac964f15cc18c4c8 250 Gene3D G3DSA:3.30.460.80 100 179 8.5E-28 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01330 c544a1dc9c96d37bac964f15cc18c4c8 250 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 12 207 32.665 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01330 c544a1dc9c96d37bac964f15cc18c4c8 250 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 200 2.4E-40 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01330 c544a1dc9c96d37bac964f15cc18c4c8 250 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 132 187 2.0E-26 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01330 c544a1dc9c96d37bac964f15cc18c4c8 250 SUPERFAMILY SSF143243 8 219 1.7E-52 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_12415 84dfa04805af15086da0b0bae18c1cdf 235 Gene3D G3DSA:3.40.50.300 30 199 2.8E-5 T 11-10-2018 XFUD_12415 84dfa04805af15086da0b0bae18c1cdf 235 SUPERFAMILY SSF52540 2 146 1.98E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_10500 0c18091f4ad8c47b0fb607e3751d2621 106 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 2.9E-33 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_10500 0c18091f4ad8c47b0fb607e3751d2621 106 SUPERFAMILY SSF141091 1 100 5.23E-33 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_10500 0c18091f4ad8c47b0fb607e3751d2621 106 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 8.8E-36 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_10500 0c18091f4ad8c47b0fb607e3751d2621 106 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_10500 0c18091f4ad8c47b0fb607e3751d2621 106 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 24.492 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04385 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 SMART SM00939 365 629 1.7E-84 T 11-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 XFUD_04385 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 SUPERFAMILY SSF49785 407 633 1.87E-73 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFUD_04385 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 49 634 2.8E-72 T 11-10-2018 IPR005674 CocE/Serine esterase GO:0016787 XFUD_04385 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 Gene3D G3DSA:1.10.3020.10 208 283 6.8E-125 T 11-10-2018 XFUD_04385 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 Gene3D G3DSA:2.60.120.260 394 632 7.4E-77 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily XFUD_04385 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 379 628 1.5E-37 T 11-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 XFUD_04385 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 Gene3D G3DSA:3.40.50.1820 43 393 6.8E-125 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_04385 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 52 338 4.1E-72 T 11-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 XFUD_04385 fb0d1d7766c2c56d0cdf77f75c6d9bba 663 SUPERFAMILY SSF53474 36 400 9.66E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_02370 6a4ab50faedd8a7c53a80d2ec6e8979d 71 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 67 20.13 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 XFUD_02370 6a4ab50faedd8a7c53a80d2ec6e8979d 71 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 9.9E-22 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 XFUD_02370 6a4ab50faedd8a7c53a80d2ec6e8979d 71 Pfam PF02416 mttA/Hcf106 family 5 48 4.0E-15 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 XFUD_12255 52573b1d8ba87a2cfc7160b097172c21 185 SMART SM00857 2 136 2.8E-61 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 XFUD_12255 52573b1d8ba87a2cfc7160b097172c21 185 SUPERFAMILY SSF46689 138 182 1.79E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFUD_12255 52573b1d8ba87a2cfc7160b097172c21 185 Gene3D G3DSA:3.40.50.1390 1 125 1.6E-52 T 11-10-2018 XFUD_12255 52573b1d8ba87a2cfc7160b097172c21 185 SUPERFAMILY SSF53041 1 135 4.97E-46 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 XFUD_12255 52573b1d8ba87a2cfc7160b097172c21 185 Pfam PF02796 Helix-turn-helix domain of resolvase 138 181 1.8E-8 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 XFUD_12255 52573b1d8ba87a2cfc7160b097172c21 185 Pfam PF00239 Resolvase, N terminal domain 3 135 2.6E-47 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 XFUD_12255 52573b1d8ba87a2cfc7160b097172c21 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 XFUD_12255 52573b1d8ba87a2cfc7160b097172c21 185 Gene3D G3DSA:1.10.10.60 138 185 4.8E-12 T 11-10-2018 XFUD_12255 52573b1d8ba87a2cfc7160b097172c21 185 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 XFUD_05550 ca5b16b75a2e805144ee06a87e69c9a8 507 Gene3D G3DSA:1.25.40.10 54 296 2.1E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_05550 ca5b16b75a2e805144ee06a87e69c9a8 507 SUPERFAMILY SSF48452 176 298 4.75E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_06300 e66f5805367da0c10d7f49e06cda15ec 295 Gene3D G3DSA:1.25.40.10 180 290 2.1E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_06300 e66f5805367da0c10d7f49e06cda15ec 295 SUPERFAMILY SSF48452 206 281 2.74E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_06300 e66f5805367da0c10d7f49e06cda15ec 295 SMART SM00028 241 274 8.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_06300 e66f5805367da0c10d7f49e06cda15ec 295 SMART SM00028 207 240 22.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_06300 e66f5805367da0c10d7f49e06cda15ec 295 Pfam PF13371 Tetratricopeptide repeat 213 284 5.6E-22 T 11-10-2018 XFUD_06300 e66f5805367da0c10d7f49e06cda15ec 295 Pfam PF13369 Transglutaminase-like superfamily 64 211 2.6E-46 T 11-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 XFUD_05165 744c0ee93d5162f36838d0b4827459d9 420 Gene3D G3DSA:1.10.287.470 144 253 3.0E-14 T 11-10-2018 XFUD_05165 744c0ee93d5162f36838d0b4827459d9 420 Gene3D G3DSA:2.40.30.170 300 398 3.0E-14 T 11-10-2018 XFUD_05165 744c0ee93d5162f36838d0b4827459d9 420 Gene3D G3DSA:2.40.50.100 264 299 3.0E-14 T 11-10-2018 XFUD_05165 744c0ee93d5162f36838d0b4827459d9 420 Pfam PF13437 HlyD family secretion protein 264 388 1.2E-14 T 11-10-2018 XFUD_05165 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 332 2.7E-18 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFUD_05165 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 79 99 2.7E-18 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFUD_05165 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 385 400 2.7E-18 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFUD_05165 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 332 355 2.7E-18 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFUD_05165 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 400 420 2.7E-18 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFUD_05165 744c0ee93d5162f36838d0b4827459d9 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 275 296 2.7E-18 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFUD_06130 05177260755cb0cedc8448a67631ce8e 171 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 131 1.9E-30 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFUD_06130 05177260755cb0cedc8448a67631ce8e 171 SUPERFAMILY SSF55083 1 151 4.05E-37 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFUD_06130 05177260755cb0cedc8448a67631ce8e 171 Gene3D G3DSA:3.30.70.560 1 155 4.8E-33 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFUD_06130 05177260755cb0cedc8448a67631ce8e 171 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 131 1.7E-21 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFUD_11755 972749aff5f79ec72bb020a44a3f0aa0 573 Pfam PF04389 Peptidase family M28 313 514 5.6E-27 T 11-10-2018 IPR007484 Peptidase M28 XFUD_11755 972749aff5f79ec72bb020a44a3f0aa0 573 Gene3D G3DSA:3.40.630.10 242 525 2.0E-36 T 11-10-2018 XFUD_11755 972749aff5f79ec72bb020a44a3f0aa0 573 Pfam PF02225 PA domain 147 224 2.7E-5 T 11-10-2018 IPR003137 PA domain XFUD_11755 972749aff5f79ec72bb020a44a3f0aa0 573 SUPERFAMILY SSF53187 42 534 1.82E-42 T 11-10-2018 XFUD_11755 972749aff5f79ec72bb020a44a3f0aa0 573 SUPERFAMILY SSF52025 145 229 3.66E-5 T 11-10-2018 XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 Gene3D G3DSA:1.10.8.60 270 341 4.9E-20 T 11-10-2018 XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 SUPERFAMILY SSF48295 336 438 2.88E-34 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 436 3.3E-162 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 Pfam PF00308 Bacterial dnaA protein 103 321 2.4E-85 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 Gene3D G3DSA:1.10.1750.10 346 439 2.3E-33 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 350 416 1.6E-29 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 SMART SM00760 347 416 1.3E-39 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 ProSitePatterns PS01008 DnaA protein signature. 397 416 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 SMART SM00382 136 267 6.8E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 Gene3D G3DSA:3.40.50.300 94 268 6.5E-45 T 11-10-2018 XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 397 416 1.1E-46 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 235 262 1.1E-46 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 169 183 1.1E-46 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 201 215 1.1E-46 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 137 157 1.1E-46 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 Gene3D G3DSA:3.30.300.180 1 93 8.4E-20 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 438 32.07 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 SUPERFAMILY SSF52540 104 315 1.24E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00005 6853aafa11c9c34fe0ff32b22a471166 439 Pfam PF11638 DnaA N-terminal domain 1 62 6.7E-14 T 11-10-2018 IPR024633 DnaA N-terminal domain XFUD_09935 7de2f7df9cad0d052f4276feac6afa24 231 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 151 228 8.4E-23 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 XFUD_09935 7de2f7df9cad0d052f4276feac6afa24 231 Gene3D G3DSA:3.30.1150.10 126 229 1.2E-23 T 11-10-2018 XFUD_09935 7de2f7df9cad0d052f4276feac6afa24 231 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 152 229 3.7E-24 T 11-10-2018 IPR006260 TonB/TolA, C-terminal XFUD_09935 7de2f7df9cad0d052f4276feac6afa24 231 SUPERFAMILY SSF74653 146 227 4.97E-20 T 11-10-2018 XFUD_06270 ec036d7e360a0e5d32a9207767593748 253 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 18 252 36.88 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 XFUD_06270 ec036d7e360a0e5d32a9207767593748 253 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 27 252 6.1E-81 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 XFUD_06270 ec036d7e360a0e5d32a9207767593748 253 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 160 174 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 XFUD_06270 ec036d7e360a0e5d32a9207767593748 253 Pfam PF01209 ubiE/COQ5 methyltransferase family 21 252 1.6E-89 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 XFUD_06270 ec036d7e360a0e5d32a9207767593748 253 SUPERFAMILY SSF53335 22 249 1.13E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_06270 ec036d7e360a0e5d32a9207767593748 253 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 38 53 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 XFUD_06270 ec036d7e360a0e5d32a9207767593748 253 Gene3D G3DSA:3.40.50.150 33 253 9.6E-70 T 11-10-2018 XFUD_04465 cdeb057b64db5d7be7a1a148330c14ac 185 Pfam PF01765 Ribosome recycling factor 20 183 5.5E-62 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 XFUD_04465 cdeb057b64db5d7be7a1a148330c14ac 185 SUPERFAMILY SSF55194 1 185 9.42E-69 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 XFUD_04465 cdeb057b64db5d7be7a1a148330c14ac 185 Gene3D G3DSA:1.10.132.20 12 182 2.3E-66 T 11-10-2018 XFUD_04465 cdeb057b64db5d7be7a1a148330c14ac 185 Gene3D G3DSA:3.30.1360.40 31 105 2.3E-66 T 11-10-2018 XFUD_04465 cdeb057b64db5d7be7a1a148330c14ac 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 4.4E-70 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 XFUD_04465 cdeb057b64db5d7be7a1a148330c14ac 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.113 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 XFUD_09745 6cb723a7325699b33670c547fa0e4b42 794 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 706 790 2.2E-15 T 11-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_09745 6cb723a7325699b33670c547fa0e4b42 794 Pfam PF00905 Penicillin binding protein transpeptidase domain 314 533 2.8E-13 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XFUD_09745 6cb723a7325699b33670c547fa0e4b42 794 Pfam PF00912 Transglycosylase 71 237 1.2E-44 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_09745 6cb723a7325699b33670c547fa0e4b42 794 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 50 792 4.0E-225 T 11-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_09745 6cb723a7325699b33670c547fa0e4b42 794 Gene3D G3DSA:1.10.3810.10 66 260 8.0E-49 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_09745 6cb723a7325699b33670c547fa0e4b42 794 Gene3D G3DSA:3.40.710.10 264 618 1.4E-68 T 11-10-2018 XFUD_09745 6cb723a7325699b33670c547fa0e4b42 794 SUPERFAMILY SSF56601 219 641 9.86E-96 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFUD_09745 6cb723a7325699b33670c547fa0e4b42 794 SUPERFAMILY SSF53955 50 268 1.6E-61 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_00940 25b03be5db6a64539b361e58dda68b60 116 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 27 107 2.7E-24 T 11-10-2018 IPR003849 Preprotein translocase YajC XFUD_00940 25b03be5db6a64539b361e58dda68b60 116 SMART SM01323 25 107 2.8E-39 T 11-10-2018 IPR003849 Preprotein translocase YajC XFUD_00940 25b03be5db6a64539b361e58dda68b60 116 PRINTS PR01853 Bacterial YajC preprotein translocase signature 65 83 3.8E-12 T 11-10-2018 IPR003849 Preprotein translocase YajC XFUD_00940 25b03be5db6a64539b361e58dda68b60 116 PRINTS PR01853 Bacterial YajC preprotein translocase signature 27 47 3.8E-12 T 11-10-2018 IPR003849 Preprotein translocase YajC XFUD_00940 25b03be5db6a64539b361e58dda68b60 116 Pfam PF02699 Preprotein translocase subunit 29 105 2.4E-26 T 11-10-2018 IPR003849 Preprotein translocase YajC XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 SUPERFAMILY SSF52172 379 497 4.27E-14 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 Gene3D G3DSA:3.40.50.2300 10 138 1.9E-18 T 11-10-2018 XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 Gene3D G3DSA:3.40.50.2300 379 498 7.1E-11 T 11-10-2018 XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 SMART SM00448 11 122 1.1E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 SMART SM00448 381 493 0.0057 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 Gene3D G3DSA:3.30.565.10 216 369 2.6E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 Pfam PF00072 Response regulator receiver domain 383 492 1.2E-6 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 Pfam PF00072 Response regulator receiver domain 13 116 1.5E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 SMART SM00387 256 363 1.4E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 SUPERFAMILY SSF55874 207 361 1.57E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 SUPERFAMILY SSF47384 145 213 7.85E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 SMART SM00388 150 215 0.0057 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 259 361 2.4E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 SUPERFAMILY SSF52172 11 143 1.01E-21 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 341 3.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 308 3.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 360 3.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 322 3.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_06125 6311fc0be0a80af6c6b84b31dc5a38e1 498 Gene3D G3DSA:1.10.287.130 139 212 4.5E-9 T 11-10-2018 XFUD_08685 6122729ac4c8010c40fa3b4ec184d01a 77 Pfam PF07793 Protein of unknown function (DUF1631) 1 72 1.1E-13 T 11-10-2018 IPR012434 Protein of unknown function DUF1631 XFUD_06000 9dd3fbd1dfd808125067a1eab6c7280f 324 Pfam PF00589 Phage integrase family 131 306 1.1E-45 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFUD_06000 9dd3fbd1dfd808125067a1eab6c7280f 324 SUPERFAMILY SSF56349 125 322 1.32E-54 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFUD_06000 9dd3fbd1dfd808125067a1eab6c7280f 324 SUPERFAMILY SSF47823 23 119 3.34E-30 T 11-10-2018 XFUD_06000 9dd3fbd1dfd808125067a1eab6c7280f 324 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 25 324 56.995 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD XFUD_06000 9dd3fbd1dfd808125067a1eab6c7280f 324 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 29 324 3.2E-107 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 XFUD_06000 9dd3fbd1dfd808125067a1eab6c7280f 324 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 23 324 55.147 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 XFUD_06000 9dd3fbd1dfd808125067a1eab6c7280f 324 Gene3D G3DSA:1.10.443.10 130 318 6.4E-65 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFUD_06000 9dd3fbd1dfd808125067a1eab6c7280f 324 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 27 107 3.3E-15 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 XFUD_06000 9dd3fbd1dfd808125067a1eab6c7280f 324 Gene3D G3DSA:1.10.150.130 22 117 1.2E-18 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFUD_00675 d21dc6e7b15db1e61166a26adc8f96e3 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 263 7.1E-69 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 XFUD_00675 d21dc6e7b15db1e61166a26adc8f96e3 266 SUPERFAMILY SSF56219 1 264 9.16E-72 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XFUD_00675 d21dc6e7b15db1e61166a26adc8f96e3 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 257 1.9E-14 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase XFUD_00675 d21dc6e7b15db1e61166a26adc8f96e3 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 263 3.9E-62 T 11-10-2018 XFUD_00675 d21dc6e7b15db1e61166a26adc8f96e3 266 Gene3D G3DSA:3.60.10.10 1 265 3.6E-77 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XFUD_02325 b2619d2aa8ad5d24a454f6129dc2fd0c 576 Gene3D G3DSA:3.40.50.2300 253 561 2.0E-69 T 11-10-2018 XFUD_02325 b2619d2aa8ad5d24a454f6129dc2fd0c 576 Pfam PF04348 LppC putative lipoprotein 42 568 1.9E-184 T 11-10-2018 IPR007443 Penicillin-binding protein activator LpoA XFUD_02325 b2619d2aa8ad5d24a454f6129dc2fd0c 576 SUPERFAMILY SSF53822 250 573 2.46E-61 T 11-10-2018 IPR028082 Periplasmic binding protein-like I XFUD_02325 b2619d2aa8ad5d24a454f6129dc2fd0c 576 Gene3D G3DSA:3.40.50.2300 358 562 2.0E-69 T 11-10-2018 XFUD_07410 d5ec8831f22badef38bffa9e8596757d 291 PRINTS PR00069 Aldo-keto reductase signature 119 137 1.5E-5 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 XFUD_07410 d5ec8831f22badef38bffa9e8596757d 291 PRINTS PR00069 Aldo-keto reductase signature 150 167 1.5E-5 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 XFUD_07410 d5ec8831f22badef38bffa9e8596757d 291 PRINTS PR00069 Aldo-keto reductase signature 221 245 1.5E-5 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 XFUD_07410 d5ec8831f22badef38bffa9e8596757d 291 SUPERFAMILY SSF51430 14 287 7.2E-73 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XFUD_07410 d5ec8831f22badef38bffa9e8596757d 291 Gene3D G3DSA:3.20.20.100 14 291 3.0E-80 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XFUD_07410 d5ec8831f22badef38bffa9e8596757d 291 Pfam PF00248 Aldo/keto reductase family 21 287 1.3E-60 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain XFUD_01720 a67752826a01363b3ab6a3b9f9978644 433 Pfam PF00005 ABC transporter 33 168 3.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_01720 a67752826a01363b3ab6a3b9f9978644 433 SUPERFAMILY SSF52540 12 243 2.9E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01720 a67752826a01363b3ab6a3b9f9978644 433 Pfam PF09821 C-terminal AAA-associated domain 304 421 8.7E-42 T 11-10-2018 IPR018632 C-terminal AAA-associated domain XFUD_01720 a67752826a01363b3ab6a3b9f9978644 433 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_01720 a67752826a01363b3ab6a3b9f9978644 433 SMART SM00382 42 220 7.9E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_01720 a67752826a01363b3ab6a3b9f9978644 433 Gene3D G3DSA:3.40.50.300 10 245 2.5E-57 T 11-10-2018 XFUD_06660 16e5760fb74d6d65a9a470a1ab395ad9 386 TIGRFAM TIGR01555 phge_rel_HI1409: phage-associated protein, HI1409 family 1 353 1.4E-176 T 11-10-2018 IPR006445 Phage-associated protein HI1409 XFUD_06660 16e5760fb74d6d65a9a470a1ab395ad9 386 Pfam PF06381 Protein of unknown function (DUF1073) 1 328 1.0E-111 T 11-10-2018 IPR024459 Protein of unknown function DUF1073 XFUD_02630 118a0bca65b16be750b251ebcb8706f3 81 SUPERFAMILY SSF46955 11 73 3.48E-7 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFUD_02630 118a0bca65b16be750b251ebcb8706f3 81 Pfam PF12728 Helix-turn-helix domain 11 63 2.1E-7 T 11-10-2018 XFUD_11540 671fd682251bdb778bce0ecb87c126d4 319 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 7 318 47.857 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 XFUD_11540 671fd682251bdb778bce0ecb87c126d4 319 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 XFUD_11540 671fd682251bdb778bce0ecb87c126d4 319 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 7 124 1.5E-44 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 XFUD_11540 671fd682251bdb778bce0ecb87c126d4 319 Gene3D G3DSA:3.40.50.2020 151 294 5.6E-126 T 11-10-2018 XFUD_11540 671fd682251bdb778bce0ecb87c126d4 319 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 317 7.1E-29 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 XFUD_11540 671fd682251bdb778bce0ecb87c126d4 319 Gene3D G3DSA:3.40.50.2020 10 306 5.6E-126 T 11-10-2018 XFUD_11540 671fd682251bdb778bce0ecb87c126d4 319 SMART SM01400 7 124 6.3E-66 T 11-10-2018 XFUD_11540 671fd682251bdb778bce0ecb87c126d4 319 SUPERFAMILY SSF53271 72 307 5.35E-60 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like XFUD_11540 671fd682251bdb778bce0ecb87c126d4 319 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 8 317 4.7E-116 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 XFUD_09825 4d37ba0eabf537c25400abc3353ece44 194 Pfam PF02659 Putative manganese efflux pump 31 186 3.1E-50 T 11-10-2018 IPR003810 Putative manganese efflux pump XFUD_09825 4d37ba0eabf537c25400abc3353ece44 194 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 189 24.633 T 11-10-2018 IPR022929 Putative manganese efflux pump MntP XFUD_11485 067c106d05ceb1dd022fa88bb4f6c678 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 9.0E-65 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11485 067c106d05ceb1dd022fa88bb4f6c678 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.1E-22 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 XFUD_11485 067c106d05ceb1dd022fa88bb4f6c678 142 SUPERFAMILY SSF54747 3 73 1.01E-29 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily XFUD_11485 067c106d05ceb1dd022fa88bb4f6c678 142 SMART SM00649 9 141 7.5E-83 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 XFUD_11485 067c106d05ceb1dd022fa88bb4f6c678 142 Gene3D G3DSA:3.30.1550.10 2 72 1.4E-34 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily XFUD_11485 067c106d05ceb1dd022fa88bb4f6c678 142 SUPERFAMILY SSF46906 68 141 2.75E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily XFUD_11485 067c106d05ceb1dd022fa88bb4f6c678 142 Gene3D G3DSA:1.10.10.250 73 141 1.2E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily XFUD_11485 067c106d05ceb1dd022fa88bb4f6c678 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 7.0E-17 T 11-10-2018 XFUD_11485 067c106d05ceb1dd022fa88bb4f6c678 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_11485 067c106d05ceb1dd022fa88bb4f6c678 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.032 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 XFUD_11485 067c106d05ceb1dd022fa88bb4f6c678 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 2.2E-29 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal XFUD_08400 9beb2a0da11c4d5d80943e7b61d0c624 415 PRINTS PR00173 Glutamate-aspartate symporter signature 334 353 6.4E-35 T 11-10-2018 XFUD_08400 9beb2a0da11c4d5d80943e7b61d0c624 415 PRINTS PR00173 Glutamate-aspartate symporter signature 361 381 6.4E-35 T 11-10-2018 XFUD_08400 9beb2a0da11c4d5d80943e7b61d0c624 415 PRINTS PR00173 Glutamate-aspartate symporter signature 234 253 6.4E-35 T 11-10-2018 XFUD_08400 9beb2a0da11c4d5d80943e7b61d0c624 415 PRINTS PR00173 Glutamate-aspartate symporter signature 299 325 6.4E-35 T 11-10-2018 XFUD_08400 9beb2a0da11c4d5d80943e7b61d0c624 415 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 6.4E-35 T 11-10-2018 XFUD_08400 9beb2a0da11c4d5d80943e7b61d0c624 415 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 6.4E-35 T 11-10-2018 XFUD_08400 9beb2a0da11c4d5d80943e7b61d0c624 415 PRINTS PR00173 Glutamate-aspartate symporter signature 151 173 6.4E-35 T 11-10-2018 XFUD_08400 9beb2a0da11c4d5d80943e7b61d0c624 415 Gene3D G3DSA:1.10.3860.10 1 411 1.4E-118 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XFUD_08400 9beb2a0da11c4d5d80943e7b61d0c624 415 SUPERFAMILY SSF118215 3 406 8.63E-100 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 XFUD_08400 9beb2a0da11c4d5d80943e7b61d0c624 415 Pfam PF00375 Sodium:dicarboxylate symporter family 3 405 5.3E-110 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 XFUD_02350 dadfb647880215a00ffcede7c322fee4 240 SUPERFAMILY SSF52317 28 204 3.15E-36 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_02350 dadfb647880215a00ffcede7c322fee4 240 Gene3D G3DSA:3.40.50.880 17 240 1.3E-47 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_02350 dadfb647880215a00ffcede7c322fee4 240 Pfam PF00117 Glutamine amidotransferase class-I 40 193 1.2E-19 T 11-10-2018 IPR017926 Glutamine amidotransferase XFUD_11115 f05fb559ea48664e70e3d26894e5d5ab 387 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XFUD_11115 f05fb559ea48664e70e3d26894e5d5ab 387 Gene3D G3DSA:3.40.50.261 240 386 6.6E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XFUD_11115 f05fb559ea48664e70e3d26894e5d5ab 387 Gene3D G3DSA:3.30.1490.20 21 104 2.6E-90 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 XFUD_11115 f05fb559ea48664e70e3d26894e5d5ab 387 PIRSF PIRSF001554 1 387 7.3E-152 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFUD_11115 f05fb559ea48664e70e3d26894e5d5ab 387 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.939 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFUD_11115 f05fb559ea48664e70e3d26894e5d5ab 387 SUPERFAMILY SSF52210 239 384 4.84E-52 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XFUD_11115 f05fb559ea48664e70e3d26894e5d5ab 387 Pfam PF08442 ATP-grasp domain 2 202 1.7E-73 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFUD_11115 f05fb559ea48664e70e3d26894e5d5ab 387 Gene3D G3DSA:3.30.470.20 1 234 2.6E-90 T 11-10-2018 XFUD_11115 f05fb559ea48664e70e3d26894e5d5ab 387 Pfam PF00549 CoA-ligase 262 381 1.4E-25 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XFUD_11115 f05fb559ea48664e70e3d26894e5d5ab 387 SUPERFAMILY SSF56059 1 238 9.02E-79 T 11-10-2018 XFUD_11115 f05fb559ea48664e70e3d26894e5d5ab 387 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.7E-160 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFUD_02955 efdce9bd9615d696b1591f9e58c52ece 210 Pfam PF02498 BRO family, N-terminal domain 17 112 1.9E-7 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_02955 efdce9bd9615d696b1591f9e58c52ece 210 SMART SM01040 14 111 9.4E-19 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_07750 f5d6d3151f09f7906a41c70570ceb23e 242 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 7 234 9.5E-20 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 XFUD_07750 f5d6d3151f09f7906a41c70570ceb23e 242 Gene3D G3DSA:3.30.420.490 114 228 6.3E-53 T 11-10-2018 XFUD_07750 f5d6d3151f09f7906a41c70570ceb23e 242 SUPERFAMILY SSF53067 5 109 7.77E-16 T 11-10-2018 XFUD_07750 f5d6d3151f09f7906a41c70570ceb23e 242 Pfam PF03309 Type III pantothenate kinase 5 190 2.0E-32 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 XFUD_07750 f5d6d3151f09f7906a41c70570ceb23e 242 Gene3D G3DSA:3.30.420.40 5 233 6.3E-53 T 11-10-2018 XFUD_07750 f5d6d3151f09f7906a41c70570ceb23e 242 SUPERFAMILY SSF53067 112 236 5.61E-25 T 11-10-2018 XFUD_07750 f5d6d3151f09f7906a41c70570ceb23e 242 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 240 14.342 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 XFUD_09155 cbc02bc11b7a0bd96cb6a4e4f3a10772 110 Gene3D G3DSA:1.10.260.40 29 108 3.1E-12 T 11-10-2018 XFUD_09155 cbc02bc11b7a0bd96cb6a4e4f3a10772 110 SUPERFAMILY SSF47413 53 95 2.03E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_09155 cbc02bc11b7a0bd96cb6a4e4f3a10772 110 Pfam PF01381 Helix-turn-helix 57 100 1.9E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_09155 cbc02bc11b7a0bd96cb6a4e4f3a10772 110 SMART SM00530 56 109 0.0031 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_12040 da0ee06f689ddfbd369131a0f44b6538 127 SUPERFAMILY SSF160472 1 119 7.06E-39 T 11-10-2018 IPR023138 NMB0513-like superfamily XFUD_12040 da0ee06f689ddfbd369131a0f44b6538 127 Gene3D G3DSA:1.10.3510.10 3 126 5.2E-16 T 11-10-2018 IPR023138 NMB0513-like superfamily XFUD_12040 da0ee06f689ddfbd369131a0f44b6538 127 Pfam PF04591 Protein of unknown function, DUF596 56 118 7.1E-26 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFUD_03260 d7ba270d7f19845a1b3e9d0e13a1ef35 89 SUPERFAMILY SSF47336 5 86 2.62E-11 T 11-10-2018 IPR036736 ACP-like superfamily XFUD_03260 d7ba270d7f19845a1b3e9d0e13a1ef35 89 Pfam PF00550 Phosphopantetheine attachment site 10 65 2.9E-7 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain XFUD_03260 d7ba270d7f19845a1b3e9d0e13a1ef35 89 Gene3D G3DSA:1.10.1200.10 7 88 2.2E-16 T 11-10-2018 IPR036736 ACP-like superfamily XFUD_11900 a12fc00f82d9d406d29aa66c6c948b95 1044 Gene3D G3DSA:3.40.50.300 465 710 7.5E-43 T 11-10-2018 XFUD_11900 a12fc00f82d9d406d29aa66c6c948b95 1044 Gene3D G3DSA:3.40.50.300 266 464 2.3E-48 T 11-10-2018 XFUD_11900 a12fc00f82d9d406d29aa66c6c948b95 1044 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 7 700 5.2E-183 T 11-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 XFUD_11900 a12fc00f82d9d406d29aa66c6c948b95 1044 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 211 3.5E-47 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 XFUD_11900 a12fc00f82d9d406d29aa66c6c948b95 1044 Pfam PF11867 Domain of unknown function (DUF3387) 698 1037 5.5E-121 T 11-10-2018 IPR021810 Protein of unknown function DUF3387 XFUD_11900 a12fc00f82d9d406d29aa66c6c948b95 1044 SUPERFAMILY SSF52540 225 489 1.06E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11900 a12fc00f82d9d406d29aa66c6c948b95 1044 SUPERFAMILY SSF52540 397 683 9.3E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11900 a12fc00f82d9d406d29aa66c6c948b95 1044 Pfam PF04851 Type III restriction enzyme, res subunit 270 446 2.6E-16 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XFUD_11900 a12fc00f82d9d406d29aa66c6c948b95 1044 Gene3D G3DSA:3.90.1570.50 99 260 1.1E-29 T 11-10-2018 XFUD_11900 a12fc00f82d9d406d29aa66c6c948b95 1044 SMART SM00487 268 479 7.5E-11 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_09990 7943b9f14042f390f2d10ca3f575e60f 257 Pfam PF02348 Cytidylyltransferase 10 228 1.9E-44 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 XFUD_09990 7943b9f14042f390f2d10ca3f575e60f 257 SUPERFAMILY SSF53448 8 253 1.67E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_09990 7943b9f14042f390f2d10ca3f575e60f 257 Gene3D G3DSA:3.90.550.10 6 255 2.2E-81 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_09990 7943b9f14042f390f2d10ca3f575e60f 257 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 8 247 1.7E-75 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 XFUD_09990 7943b9f14042f390f2d10ca3f575e60f 257 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 6 255 37.864 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 XFUD_04250 92c0e2239f00036bb7e14f87fc101990 418 SUPERFAMILY SSF103473 22 416 3.27E-36 T 11-10-2018 IPR036259 MFS transporter superfamily XFUD_04250 92c0e2239f00036bb7e14f87fc101990 418 Gene3D G3DSA:1.20.1250.20 229 412 2.7E-9 T 11-10-2018 XFUD_04250 92c0e2239f00036bb7e14f87fc101990 418 Gene3D G3DSA:1.20.1250.20 14 212 4.2E-18 T 11-10-2018 XFUD_04250 92c0e2239f00036bb7e14f87fc101990 418 Pfam PF05977 Transmembrane secretion effector 18 408 3.0E-31 T 11-10-2018 IPR010290 Transmembrane secretion effector XFUD_06780 2c82730e2f0b35aac6014bdeb7268f98 97 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 4 91 5.8E-39 T 11-10-2018 IPR014057 Uncharacterized protein HI1420 XFUD_06780 2c82730e2f0b35aac6014bdeb7268f98 97 SUPERFAMILY SSF47413 31 90 3.89E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_07610 57b97b17edcb58669588831a5ceb5b92 296 SUPERFAMILY SSF46785 5 87 1.21E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_07610 57b97b17edcb58669588831a5ceb5b92 296 Gene3D G3DSA:1.10.10.10 5 91 8.2E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_07610 57b97b17edcb58669588831a5ceb5b92 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_07610 57b97b17edcb58669588831a5ceb5b92 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_07610 57b97b17edcb58669588831a5ceb5b92 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_07610 57b97b17edcb58669588831a5ceb5b92 296 Pfam PF03466 LysR substrate binding domain 90 294 3.3E-34 T 11-10-2018 IPR005119 LysR, substrate-binding XFUD_07610 57b97b17edcb58669588831a5ceb5b92 296 Gene3D G3DSA:3.40.190.10 166 269 4.6E-50 T 11-10-2018 XFUD_07610 57b97b17edcb58669588831a5ceb5b92 296 Gene3D G3DSA:3.40.190.10 94 293 4.6E-50 T 11-10-2018 XFUD_07610 57b97b17edcb58669588831a5ceb5b92 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.0E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 XFUD_07610 57b97b17edcb58669588831a5ceb5b92 296 SUPERFAMILY SSF53850 91 294 1.72E-37 T 11-10-2018 XFUD_05135 93298e1136b1032ac6f7a596868f550b 467 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 464 4.0E-101 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 XFUD_05135 93298e1136b1032ac6f7a596868f550b 467 SUPERFAMILY SSF56024 100 296 6.28E-45 T 11-10-2018 XFUD_05135 93298e1136b1032ac6f7a596868f550b 467 Gene3D G3DSA:3.30.870.10 298 439 1.2E-21 T 11-10-2018 XFUD_05135 93298e1136b1032ac6f7a596868f550b 467 SMART SM00155 209 236 0.0042 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XFUD_05135 93298e1136b1032ac6f7a596868f550b 467 SMART SM00155 380 407 0.47 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 XFUD_05135 93298e1136b1032ac6f7a596868f550b 467 SUPERFAMILY SSF56024 258 454 1.48E-43 T 11-10-2018 XFUD_05135 93298e1136b1032ac6f7a596868f550b 467 Pfam PF13091 PLD-like domain 125 266 5.0E-17 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XFUD_05135 93298e1136b1032ac6f7a596868f550b 467 Pfam PF13091 PLD-like domain 310 429 7.8E-24 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 XFUD_05135 93298e1136b1032ac6f7a596868f550b 467 Gene3D G3DSA:3.30.870.10 107 297 4.4E-32 T 11-10-2018 XFUD_07665 f457a7dff8aa4c8a2d1f515b6135a2eb 150 SUPERFAMILY SSF50249 3 138 2.78E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_07665 f457a7dff8aa4c8a2d1f515b6135a2eb 150 Gene3D G3DSA:2.40.50.140 3 149 5.5E-22 T 11-10-2018 XFUD_07665 f457a7dff8aa4c8a2d1f515b6135a2eb 150 Pfam PF00436 Single-strand binding protein family 9 109 1.2E-11 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XFUD_07665 f457a7dff8aa4c8a2d1f515b6135a2eb 150 PIRSF PIRSF002070 1 149 9.7E-24 T 11-10-2018 XFUD_05145 5927c39ab10669ba564aa837d02c8b0e 328 Gene3D G3DSA:3.40.50.720 1 156 1.3E-56 T 11-10-2018 XFUD_05145 5927c39ab10669ba564aa837d02c8b0e 328 SUPERFAMILY SSF56327 159 327 3.86E-57 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 XFUD_05145 5927c39ab10669ba564aa837d02c8b0e 328 SUPERFAMILY SSF51735 4 157 1.06E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_05145 5927c39ab10669ba564aa837d02c8b0e 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 150 7.5E-36 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 XFUD_05145 5927c39ab10669ba564aa837d02c8b0e 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 54.892 T 11-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 XFUD_05145 5927c39ab10669ba564aa837d02c8b0e 328 Gene3D G3DSA:3.90.110.10 157 328 9.4E-60 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 XFUD_05145 5927c39ab10669ba564aa837d02c8b0e 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 322 8.4E-29 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 XFUD_05145 5927c39ab10669ba564aa837d02c8b0e 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 3 321 6.4E-140 T 11-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 XFUD_05145 5927c39ab10669ba564aa837d02c8b0e 328 PIRSF PIRSF000102 1 326 1.4E-62 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 XFUD_00360 254fa508b28fc01e4e5f72290d8757f1 450 Pfam PF01926 50S ribosome-binding GTPase 200 318 4.3E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_00360 254fa508b28fc01e4e5f72290d8757f1 450 Gene3D G3DSA:3.40.50.11060 18 138 6.6E-36 T 11-10-2018 XFUD_00360 254fa508b28fc01e4e5f72290d8757f1 450 SUPERFAMILY SSF52540 198 365 3.35E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00360 254fa508b28fc01e4e5f72290d8757f1 450 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 6.6E-12 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_00360 254fa508b28fc01e4e5f72290d8757f1 450 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 6.6E-12 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_00360 254fa508b28fc01e4e5f72290d8757f1 450 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 6.6E-12 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_00360 254fa508b28fc01e4e5f72290d8757f1 450 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 364 5.4E-144 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 XFUD_00360 254fa508b28fc01e4e5f72290d8757f1 450 Pfam PF13167 GTP-binding GTPase N-terminal 26 112 4.4E-29 T 11-10-2018 IPR025121 GTPase HflX, N-terminal XFUD_00360 254fa508b28fc01e4e5f72290d8757f1 450 Pfam PF16360 GTP-binding GTPase Middle Region 114 193 3.2E-26 T 11-10-2018 IPR032305 GTP-binding protein, middle domain XFUD_00360 254fa508b28fc01e4e5f72290d8757f1 450 PIRSF PIRSF006809 3 424 1.9E-138 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 XFUD_00360 254fa508b28fc01e4e5f72290d8757f1 450 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 199 359 1.6E-12 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 XFUD_00360 254fa508b28fc01e4e5f72290d8757f1 450 Hamap MF_00900 GTPase HflX [hflX]. 27 394 45.951 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 XFUD_00360 254fa508b28fc01e4e5f72290d8757f1 450 Gene3D G3DSA:3.40.50.300 198 373 1.1E-40 T 11-10-2018 XFUD_04485 e2edb2782cde083eb88e9811d0cf7259 243 PIRSF PIRSF005650 1 243 3.0E-93 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 XFUD_04485 e2edb2782cde083eb88e9811d0cf7259 243 SUPERFAMILY SSF53633 5 236 8.12E-71 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFUD_04485 e2edb2782cde083eb88e9811d0cf7259 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 5.8E-98 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 XFUD_04485 e2edb2782cde083eb88e9811d0cf7259 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 44.538 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 XFUD_04485 e2edb2782cde083eb88e9811d0cf7259 243 Gene3D G3DSA:3.40.1160.10 2 242 6.7E-77 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily XFUD_04485 e2edb2782cde083eb88e9811d0cf7259 243 Pfam PF00696 Amino acid kinase family 8 216 1.5E-27 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 XFUD_01175 954ec03d70dee9a2c03aa27f78aba23b 684 SUPERFAMILY SSF48317 246 442 1.24E-22 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XFUD_01175 954ec03d70dee9a2c03aa27f78aba23b 684 Pfam PF01569 PAP2 superfamily 356 435 3.2E-11 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XFUD_01175 954ec03d70dee9a2c03aa27f78aba23b 684 Gene3D G3DSA:1.20.144.10 345 448 3.4E-16 T 11-10-2018 XFUD_01175 954ec03d70dee9a2c03aa27f78aba23b 684 Pfam PF09335 SNARE associated Golgi protein 40 163 1.5E-17 T 11-10-2018 IPR032816 SNARE associated Golgi protein XFUD_01175 954ec03d70dee9a2c03aa27f78aba23b 684 Pfam PF14067 LssY C-terminus 496 619 2.3E-12 T 11-10-2018 IPR025902 LssY-like C-terminal domain XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 Pfam PF07516 SecA Wing and Scaffold domain 615 826 1.3E-64 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 815 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 SUPERFAMILY SSF52540 6 411 6.55E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 829 19.959 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 Pfam PF07517 SecA DEAD-like domain 7 398 2.5E-132 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 Pfam PF01043 SecA preprotein cross-linking domain 233 354 1.9E-38 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 SUPERFAMILY SSF81886 618 902 1.22E-78 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 ProSitePatterns PS01312 SecA family signature. 496 511 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 Gene3D G3DSA:3.40.50.300 22 411 1.7E-177 T 11-10-2018 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 Gene3D G3DSA:3.90.1440.10 229 364 1.7E-177 T 11-10-2018 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 SMART SM00958 228 354 3.2E-78 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 Gene3D G3DSA:3.40.50.300 413 617 1.1E-84 T 11-10-2018 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 SUPERFAMILY SSF52540 412 615 2.76E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 Gene3D G3DSA:1.10.3060.10 619 830 2.8E-71 T 11-10-2018 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 SUPERFAMILY SSF81767 227 364 1.44E-43 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 SMART SM00957 6 398 0.0 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 63 87 1.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 335 357 1.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 372 389 1.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 409 422 1.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 117 127 1.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 170 190 1.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 PRINTS PR00906 SecA protein signature 101 115 1.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 XFUD_03440 eeacf8512171c11a336a979842aa7bcc 914 Pfam PF02810 SEC-C motif 894 911 8.4E-11 T 11-10-2018 IPR004027 SEC-C motif XFUD_12265 bf5a0ad129b3c4828e1ee5b67fb7a4b9 139 SMART SM00670 1 117 3.6E-14 T 11-10-2018 IPR002716 PIN domain XFUD_12265 bf5a0ad129b3c4828e1ee5b67fb7a4b9 139 SUPERFAMILY SSF88723 1 115 1.01E-15 T 11-10-2018 IPR029060 PIN-like domain superfamily XFUD_12265 bf5a0ad129b3c4828e1ee5b67fb7a4b9 139 Pfam PF13470 PIN domain 2 113 9.2E-18 T 11-10-2018 IPR002716 PIN domain XFUD_12265 bf5a0ad129b3c4828e1ee5b67fb7a4b9 139 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 2 112 8.5E-15 T 11-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component XFUD_11795 2743b3618df8b897ea0034b399952f40 296 SUPERFAMILY SSF51735 1 248 2.1E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_11795 2743b3618df8b897ea0034b399952f40 296 Gene3D G3DSA:3.40.50.720 1 287 1.8E-67 T 11-10-2018 XFUD_11795 2743b3618df8b897ea0034b399952f40 296 Pfam PF00106 short chain dehydrogenase 7 213 2.8E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_11795 2743b3618df8b897ea0034b399952f40 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.2E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_11795 2743b3618df8b897ea0034b399952f40 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.2E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_11795 2743b3618df8b897ea0034b399952f40 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 5.2E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_11795 2743b3618df8b897ea0034b399952f40 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 5.2E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_00340 e841663cae196ed96b17305a8e3b1ff0 266 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 109 126 - T 11-10-2018 IPR018046 Pili assembly chaperone, conserved site XFUD_00340 e841663cae196ed96b17305a8e3b1ff0 266 SUPERFAMILY SSF49354 27 166 8.14E-44 T 11-10-2018 IPR008962 PapD-like superfamily XFUD_00340 e841663cae196ed96b17305a8e3b1ff0 266 Gene3D G3DSA:2.60.40.10 169 265 1.5E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFUD_00340 e841663cae196ed96b17305a8e3b1ff0 266 Gene3D G3DSA:2.60.40.10 33 167 1.9E-45 T 11-10-2018 IPR013783 Immunoglobulin-like fold XFUD_00340 e841663cae196ed96b17305a8e3b1ff0 266 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 31 167 5.0E-48 T 11-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 XFUD_00340 e841663cae196ed96b17305a8e3b1ff0 266 SUPERFAMILY SSF49584 160 258 1.09E-15 T 11-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily XFUD_00340 e841663cae196ed96b17305a8e3b1ff0 266 PRINTS PR00969 Pili chaperone signature 184 199 9.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XFUD_00340 e841663cae196ed96b17305a8e3b1ff0 266 PRINTS PR00969 Pili chaperone signature 110 127 9.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XFUD_00340 e841663cae196ed96b17305a8e3b1ff0 266 PRINTS PR00969 Pili chaperone signature 81 102 9.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XFUD_00340 e841663cae196ed96b17305a8e3b1ff0 266 PRINTS PR00969 Pili chaperone signature 148 163 9.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XFUD_00340 e841663cae196ed96b17305a8e3b1ff0 266 PRINTS PR00969 Pili chaperone signature 32 41 9.5E-36 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 XFUD_00340 e841663cae196ed96b17305a8e3b1ff0 266 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 189 256 1.2E-14 T 11-10-2018 IPR016148 Pili assembly chaperone, C-terminal XFUD_06135 bb7ebd0d7def2a31df8a5a7403884a7c 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XFUD_06135 bb7ebd0d7def2a31df8a5a7403884a7c 245 Gene3D G3DSA:3.40.50.720 3 245 9.8E-69 T 11-10-2018 XFUD_06135 bb7ebd0d7def2a31df8a5a7403884a7c 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 8.8E-50 T 11-10-2018 XFUD_06135 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_06135 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_06135 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_06135 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_06135 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_06135 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_06135 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_06135 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_06135 bb7ebd0d7def2a31df8a5a7403884a7c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.9E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_06135 bb7ebd0d7def2a31df8a5a7403884a7c 245 SUPERFAMILY SSF51735 6 244 9.62E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_05950 df4b0d3fb42bdfd87a9537a16a987e3b 75 SUPERFAMILY SSF82657 3 74 7.06E-21 T 11-10-2018 IPR036065 BolA-like superfamily XFUD_05950 df4b0d3fb42bdfd87a9537a16a987e3b 75 PIRSF PIRSF003113 2 75 5.8E-19 T 11-10-2018 IPR002634 BolA protein XFUD_05950 df4b0d3fb42bdfd87a9537a16a987e3b 75 Gene3D G3DSA:3.30.300.90 1 75 4.6E-29 T 11-10-2018 XFUD_05950 df4b0d3fb42bdfd87a9537a16a987e3b 75 Pfam PF01722 BolA-like protein 18 74 3.1E-16 T 11-10-2018 IPR002634 BolA protein XFUD_11730 e0e58741754c268ffad72f0f4ce65709 564 SUPERFAMILY SSF50249 195 269 1.43E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_11730 e0e58741754c268ffad72f0f4ce65709 564 SUPERFAMILY SSF68912 147 192 1.29E-7 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily XFUD_11730 e0e58741754c268ffad72f0f4ce65709 564 Pfam PF07498 Rho termination factor, N-terminal domain 150 193 5.0E-14 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 XFUD_11730 e0e58741754c268ffad72f0f4ce65709 564 SMART SM00959 150 193 1.3E-13 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 XFUD_11730 e0e58741754c268ffad72f0f4ce65709 564 Hamap MF_01884 Transcription termination factor Rho [rho]. 146 564 229.529 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 XFUD_11730 e0e58741754c268ffad72f0f4ce65709 564 Gene3D G3DSA:3.40.50.300 276 563 1.5E-128 T 11-10-2018 XFUD_11730 e0e58741754c268ffad72f0f4ce65709 564 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 306 509 1.6E-22 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFUD_11730 e0e58741754c268ffad72f0f4ce65709 564 Gene3D G3DSA:1.10.720.10 147 193 1.8E-15 T 11-10-2018 XFUD_11730 e0e58741754c268ffad72f0f4ce65709 564 Pfam PF07497 Rho termination factor, RNA-binding domain 198 270 1.0E-27 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 XFUD_11730 e0e58741754c268ffad72f0f4ce65709 564 SMART SM00382 316 496 3.5E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_11730 e0e58741754c268ffad72f0f4ce65709 564 Gene3D G3DSA:2.40.50.140 194 269 2.3E-30 T 11-10-2018 XFUD_11730 e0e58741754c268ffad72f0f4ce65709 564 SMART SM00357 198 264 6.8E-15 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 XFUD_11730 e0e58741754c268ffad72f0f4ce65709 564 TIGRFAM TIGR00767 rho: transcription termination factor Rho 147 563 4.8E-207 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 XFUD_11730 e0e58741754c268ffad72f0f4ce65709 564 SUPERFAMILY SSF52540 236 517 7.16E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_03100 a47f3ed2c0ebc73569ec017a4d04cb25 72 Gene3D G3DSA:3.10.350.10 5 72 6.3E-19 T 11-10-2018 IPR036779 LysM domain superfamily XFUD_03100 a47f3ed2c0ebc73569ec017a4d04cb25 72 Pfam PF05489 Phage Tail Protein X 4 64 8.0E-29 T 11-10-2018 IPR008861 Phage Tail Protein X-like XFUD_10765 a47f3ed2c0ebc73569ec017a4d04cb25 72 Gene3D G3DSA:3.10.350.10 5 72 6.3E-19 T 11-10-2018 IPR036779 LysM domain superfamily XFUD_10765 a47f3ed2c0ebc73569ec017a4d04cb25 72 Pfam PF05489 Phage Tail Protein X 4 64 8.0E-29 T 11-10-2018 IPR008861 Phage Tail Protein X-like XFUD_08595 6b96ccf88415696a0eb2e5aabd2d8fc3 203 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 17 194 3.3E-65 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XFUD_08595 6b96ccf88415696a0eb2e5aabd2d8fc3 203 Gene3D G3DSA:1.10.286.10 1 60 5.3E-21 T 11-10-2018 XFUD_08595 6b96ccf88415696a0eb2e5aabd2d8fc3 203 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 12 195 38.868 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XFUD_08595 6b96ccf88415696a0eb2e5aabd2d8fc3 203 Gene3D G3DSA:3.30.1130.10 64 197 2.7E-52 T 11-10-2018 XFUD_08595 6b96ccf88415696a0eb2e5aabd2d8fc3 203 SUPERFAMILY SSF55620 6 195 7.41E-76 T 11-10-2018 XFUD_08595 6b96ccf88415696a0eb2e5aabd2d8fc3 203 Pfam PF01227 GTP cyclohydrolase I 17 194 1.3E-73 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XFUD_08595 6b96ccf88415696a0eb2e5aabd2d8fc3 203 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 122 132 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XFUD_08595 6b96ccf88415696a0eb2e5aabd2d8fc3 203 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 74 90 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 XFUD_12385 faa5586fe9e2245328958db7190b6995 106 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 10 102 1.4E-35 T 11-10-2018 IPR014056 Addiction module killer protein, predicted XFUD_12385 faa5586fe9e2245328958db7190b6995 106 PIRSF PIRSF028744 1 106 4.8E-41 T 11-10-2018 IPR014056 Addiction module killer protein, predicted XFUD_01520 a4d4cacfd8b6f2e14fc228ef74cc4d27 420 SUPERFAMILY SSF53474 78 387 7.22E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_01520 a4d4cacfd8b6f2e14fc228ef74cc4d27 420 Pfam PF03583 Secretory lipase 128 210 5.6E-8 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XFUD_01520 a4d4cacfd8b6f2e14fc228ef74cc4d27 420 PIRSF PIRSF029171 5 420 6.9E-76 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 XFUD_01520 a4d4cacfd8b6f2e14fc228ef74cc4d27 420 Gene3D G3DSA:1.10.260.160 253 336 4.7E-5 T 11-10-2018 XFUD_01520 a4d4cacfd8b6f2e14fc228ef74cc4d27 420 Gene3D G3DSA:3.40.50.1820 31 252 1.1E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_01520 a4d4cacfd8b6f2e14fc228ef74cc4d27 420 Gene3D G3DSA:3.40.50.1820 337 420 1.3E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_10690 014e658b40d1fa132a62a1fc694dac50 214 Gene3D G3DSA:1.25.40.10 68 210 3.5E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_10690 014e658b40d1fa132a62a1fc694dac50 214 Pfam PF13432 Tetratricopeptide repeat 68 119 0.0043 T 11-10-2018 XFUD_10690 014e658b40d1fa132a62a1fc694dac50 214 Pfam PF13432 Tetratricopeptide repeat 141 178 0.0018 T 11-10-2018 XFUD_10690 014e658b40d1fa132a62a1fc694dac50 214 SUPERFAMILY SSF48452 70 182 6.56E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_07460 3e733ffc3d632f3ce40c035c68b22b69 405 Pfam PF07995 Glucose / Sorbosone dehydrogenase 71 398 7.7E-128 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase XFUD_07460 3e733ffc3d632f3ce40c035c68b22b69 405 Gene3D G3DSA:2.120.10.30 57 402 2.2E-110 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XFUD_07460 3e733ffc3d632f3ce40c035c68b22b69 405 SUPERFAMILY SSF50952 52 403 3.01E-48 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 XFUD_06495 f8a3083b265021704708f23ad2d82ae1 429 PIRSF PIRSF001369 38 429 2.0E-159 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type XFUD_06495 f8a3083b265021704708f23ad2d82ae1 429 Gene3D G3DSA:1.10.230.10 269 379 1.2E-143 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain XFUD_06495 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 362 378 4.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 XFUD_06495 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 382 396 4.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 XFUD_06495 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 166 179 4.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 XFUD_06495 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 299 319 4.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 XFUD_06495 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 220 235 4.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 XFUD_06495 f8a3083b265021704708f23ad2d82ae1 429 PRINTS PR00143 Citrate synthase signature 242 270 4.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 XFUD_06495 f8a3083b265021704708f23ad2d82ae1 429 Gene3D G3DSA:1.10.580.10 58 414 1.2E-143 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 XFUD_06495 f8a3083b265021704708f23ad2d82ae1 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 425 4.7E-201 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 XFUD_06495 f8a3083b265021704708f23ad2d82ae1 429 Gene3D G3DSA:2.20.28.60 5 51 1.4E-14 T 11-10-2018 XFUD_06495 f8a3083b265021704708f23ad2d82ae1 429 ProSitePatterns PS00480 Citrate synthase signature. 306 318 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 XFUD_06495 f8a3083b265021704708f23ad2d82ae1 429 SUPERFAMILY SSF48256 9 427 1.96E-160 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 XFUD_06495 f8a3083b265021704708f23ad2d82ae1 429 Pfam PF00285 Citrate synthase, C-terminal domain 47 414 5.2E-134 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 XFUD_02295 a363f73a78bedfdcda3449f125a258a8 222 PIRSF PIRSF028583 4 222 1.3E-102 T 11-10-2018 IPR016892 Uncharacterised conserved protein UCP028583 XFUD_09380 05d6ce155097894616775642047147c1 258 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 2.2E-95 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XFUD_09380 05d6ce155097894616775642047147c1 258 SUPERFAMILY SSF56281 1 253 3.68E-67 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFUD_09380 05d6ce155097894616775642047147c1 258 Gene3D G3DSA:3.60.15.10 1 252 1.7E-85 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFUD_09380 05d6ce155097894616775642047147c1 258 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 165 252 6.6E-26 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XFUD_09380 05d6ce155097894616775642047147c1 258 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 252 40.363 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XFUD_09380 05d6ce155097894616775642047147c1 258 PIRSF PIRSF005457 1 252 1.2E-85 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 XFUD_09380 05d6ce155097894616775642047147c1 258 SMART SM00849 12 164 1.7E-34 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFUD_09380 05d6ce155097894616775642047147c1 258 Pfam PF00753 Metallo-beta-lactamase superfamily 15 164 1.0E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFUD_02445 c4e6bccfd446415f1fe52558daf1787c 351 SUPERFAMILY SSF56042 176 343 3.29E-55 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFUD_02445 c4e6bccfd446415f1fe52558daf1787c 351 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 340 1.3E-135 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFUD_02445 c4e6bccfd446415f1fe52558daf1787c 351 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 341 1.3E-35 T 11-10-2018 IPR010918 PurM-like, C-terminal domain XFUD_02445 c4e6bccfd446415f1fe52558daf1787c 351 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 152 4.9E-14 T 11-10-2018 IPR016188 PurM-like, N-terminal domain XFUD_02445 c4e6bccfd446415f1fe52558daf1787c 351 Gene3D G3DSA:3.90.650.10 176 350 9.6E-60 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily XFUD_02445 c4e6bccfd446415f1fe52558daf1787c 351 SUPERFAMILY SSF55326 12 174 2.84E-51 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFUD_02445 c4e6bccfd446415f1fe52558daf1787c 351 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 350 45.338 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 XFUD_02445 c4e6bccfd446415f1fe52558daf1787c 351 Gene3D G3DSA:3.30.1330.10 11 175 8.7E-68 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily XFUD_07305 5966d61a62244ca40a752d700addbe69 371 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 9 80 6.3E-16 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 XFUD_07305 5966d61a62244ca40a752d700addbe69 371 SUPERFAMILY SSF47413 9 79 2.93E-20 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_07305 5966d61a62244ca40a752d700addbe69 371 SMART SM00530 13 68 4.7E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_07305 5966d61a62244ca40a752d700addbe69 371 Gene3D G3DSA:1.10.260.40 5 81 2.3E-25 T 11-10-2018 XFUD_07305 5966d61a62244ca40a752d700addbe69 371 Pfam PF01381 Helix-turn-helix 14 66 7.3E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_00975 aac984724ff8553b945976c0d0894e43 281 Gene3D G3DSA:3.30.1300.10 180 281 6.1E-27 T 11-10-2018 XFUD_00975 aac984724ff8553b945976c0d0894e43 281 Gene3D G3DSA:3.40.50.620 1 179 1.2E-68 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_00975 aac984724ff8553b945976c0d0894e43 281 SUPERFAMILY SSF52374 3 280 6.66E-98 T 11-10-2018 XFUD_00975 aac984724ff8553b945976c0d0894e43 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 4 279 4.3E-86 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 XFUD_00975 aac984724ff8553b945976c0d0894e43 281 Pfam PF02569 Pantoate-beta-alanine ligase 5 279 2.0E-93 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 XFUD_00975 aac984724ff8553b945976c0d0894e43 281 Hamap MF_00158 Pantothenate synthetase [panC]. 3 281 37.628 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 XFUD_03655 c780c1fc9151f83a644a3e2b46542fd9 300 SUPERFAMILY SSF160240 220 287 5.49E-8 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 XFUD_03655 c780c1fc9151f83a644a3e2b46542fd9 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 289 2.6E-85 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 XFUD_03655 c780c1fc9151f83a644a3e2b46542fd9 300 Pfam PF01545 Cation efflux family 19 209 5.4E-49 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 XFUD_03655 c780c1fc9151f83a644a3e2b46542fd9 300 Gene3D G3DSA:1.20.1510.10 15 209 4.4E-49 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily XFUD_03655 c780c1fc9151f83a644a3e2b46542fd9 300 SUPERFAMILY SSF161111 15 210 9.02E-59 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 SUPERFAMILY SSF54826 4 136 5.08E-52 T 11-10-2018 XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 Gene3D G3DSA:3.20.20.120 128 430 4.0E-128 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 425 7.9E-128 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 PIRSF PIRSF001400 1 427 7.0E-181 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 SMART SM01192 141 427 6.8E-211 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 SUPERFAMILY SSF51604 141 427 7.07E-122 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 ProSitePatterns PS00164 Enolase signature. 336 349 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 Pfam PF03952 Enolase, N-terminal domain 4 134 6.7E-55 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 Gene3D G3DSA:3.30.390.10 1 126 6.6E-52 T 11-10-2018 IPR029017 Enolase-like, N-terminal XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 SMART SM01193 4 134 3.0E-84 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 PRINTS PR00148 Enolase signature 37 51 3.5E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 PRINTS PR00148 Enolase signature 163 176 3.5E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 PRINTS PR00148 Enolase signature 107 123 3.5E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 PRINTS PR00148 Enolase signature 365 382 3.5E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 PRINTS PR00148 Enolase signature 313 324 3.5E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 PRINTS PR00148 Enolase signature 336 350 3.5E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 Hamap MF_00318 Enolase [eno]. 2 413 43.579 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFUD_05440 051851fbc7a6c7cfb29602f7fc1ceee6 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 1.2E-197 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 XFUD_06235 3f8411ae6b84fdd8d48abcfafb176c1c 717 SUPERFAMILY SSF50993 24 446 1.65E-75 T 11-10-2018 XFUD_06235 3f8411ae6b84fdd8d48abcfafb176c1c 717 Gene3D G3DSA:3.40.50.1820 45 710 2.4E-249 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_06235 3f8411ae6b84fdd8d48abcfafb176c1c 717 Gene3D G3DSA:2.130.10.120 96 443 2.4E-249 T 11-10-2018 XFUD_06235 3f8411ae6b84fdd8d48abcfafb176c1c 717 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 26 442 5.8E-105 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 XFUD_06235 3f8411ae6b84fdd8d48abcfafb176c1c 717 Pfam PF00326 Prolyl oligopeptidase family 501 715 1.4E-66 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 XFUD_06235 3f8411ae6b84fdd8d48abcfafb176c1c 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 568 588 2.5E-45 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XFUD_06235 3f8411ae6b84fdd8d48abcfafb176c1c 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 510 534 2.5E-45 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XFUD_06235 3f8411ae6b84fdd8d48abcfafb176c1c 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 626 641 2.5E-45 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XFUD_06235 3f8411ae6b84fdd8d48abcfafb176c1c 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 644 666 2.5E-45 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XFUD_06235 3f8411ae6b84fdd8d48abcfafb176c1c 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 484 502 2.5E-45 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XFUD_06235 3f8411ae6b84fdd8d48abcfafb176c1c 717 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 557 2.5E-45 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 XFUD_06235 3f8411ae6b84fdd8d48abcfafb176c1c 717 SUPERFAMILY SSF53474 452 714 1.06E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_09265 51bdcace97ba8f8c58f3c3a40ec2c520 793 SUPERFAMILY SSF56935 33 793 3.3E-97 T 11-10-2018 XFUD_09265 51bdcace97ba8f8c58f3c3a40ec2c520 793 Pfam PF00593 TonB dependent receptor 284 781 1.0E-44 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFUD_09265 51bdcace97ba8f8c58f3c3a40ec2c520 793 Gene3D G3DSA:2.170.130.10 28 172 1.2E-33 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFUD_09265 51bdcace97ba8f8c58f3c3a40ec2c520 793 Gene3D G3DSA:2.40.170.20 275 779 7.3E-54 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XFUD_09265 51bdcace97ba8f8c58f3c3a40ec2c520 793 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 11-10-2018 IPR010916 TonB box, conserved site XFUD_09265 51bdcace97ba8f8c58f3c3a40ec2c520 793 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 168 1.1E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFUD_04695 61c4d5f58d135fc93d18620e2b36e330 613 Gene3D G3DSA:3.90.1640.30 56 345 3.3E-80 T 11-10-2018 XFUD_04695 61c4d5f58d135fc93d18620e2b36e330 613 SUPERFAMILY SSF64182 56 485 3.79E-103 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily XFUD_04695 61c4d5f58d135fc93d18620e2b36e330 613 Gene3D G3DSA:3.10.310.30 350 480 7.1E-28 T 11-10-2018 XFUD_04695 61c4d5f58d135fc93d18620e2b36e330 613 Pfam PF01368 DHH family 82 209 2.0E-9 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 XFUD_04695 61c4d5f58d135fc93d18620e2b36e330 613 Pfam PF02272 DHHA1 domain 341 473 4.3E-22 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 XFUD_04695 61c4d5f58d135fc93d18620e2b36e330 613 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 48 591 3.2E-131 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 XFUD_11450 7ce614eae2ae07315e0a49615d491959 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_11450 7ce614eae2ae07315e0a49615d491959 155 SUPERFAMILY SSF47973 3 148 3.92E-58 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily XFUD_11450 7ce614eae2ae07315e0a49615d491959 155 PIRSF PIRSF002122 2 155 1.6E-62 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 XFUD_11450 7ce614eae2ae07315e0a49615d491959 155 Pfam PF00177 Ribosomal protein S7p/S5e 1 148 4.7E-65 T 11-10-2018 IPR023798 Ribosomal protein S7 domain XFUD_11450 7ce614eae2ae07315e0a49615d491959 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 35.697 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 XFUD_11450 7ce614eae2ae07315e0a49615d491959 155 Gene3D G3DSA:1.10.455.10 2 154 6.9E-59 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily XFUD_11450 7ce614eae2ae07315e0a49615d491959 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 5.9E-66 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 XFUD_04225 b2217260ca2949ce44e64982337fbeb3 285 Gene3D G3DSA:2.70.70.10 127 284 8.1E-46 T 11-10-2018 IPR011055 Duplicated hybrid motif XFUD_04225 b2217260ca2949ce44e64982337fbeb3 285 SUPERFAMILY SSF51261 43 281 3.4E-51 T 11-10-2018 IPR011055 Duplicated hybrid motif XFUD_04225 b2217260ca2949ce44e64982337fbeb3 285 Pfam PF01551 Peptidase family M23 182 277 5.6E-29 T 11-10-2018 IPR016047 Peptidase M23 XFUD_08420 4e41b74331fcdfac15f9075dfffe12cd 130 SMART SM00411 33 130 7.5E-5 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_08420 4e41b74331fcdfac15f9075dfffe12cd 130 Gene3D G3DSA:4.10.520.10 32 130 1.3E-13 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFUD_08420 4e41b74331fcdfac15f9075dfffe12cd 130 Pfam PF00216 Bacterial DNA-binding protein 34 128 1.6E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 XFUD_08420 4e41b74331fcdfac15f9075dfffe12cd 130 SUPERFAMILY SSF47729 33 128 3.39E-14 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 XFUD_10680 02830e1d695ccc9b5b04339cbf9c8f7a 197 Pfam PF08534 Redoxin 46 169 9.9E-15 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 XFUD_10680 02830e1d695ccc9b5b04339cbf9c8f7a 197 SUPERFAMILY SSF52833 50 182 2.61E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_10680 02830e1d695ccc9b5b04339cbf9c8f7a 197 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 36 180 3.4E-43 T 11-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 XFUD_10680 02830e1d695ccc9b5b04339cbf9c8f7a 197 ProSitePatterns PS00194 Thioredoxin family active site. 75 93 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 XFUD_10680 02830e1d695ccc9b5b04339cbf9c8f7a 197 Gene3D G3DSA:3.40.30.10 32 189 7.4E-36 T 11-10-2018 XFUD_02245 57e2b4def4c3659080684f337d3cc752 334 Gene3D G3DSA:2.40.10.10 105 219 1.3E-23 T 11-10-2018 XFUD_02245 57e2b4def4c3659080684f337d3cc752 334 Gene3D G3DSA:2.40.10.10 224 330 1.0E-7 T 11-10-2018 XFUD_02245 57e2b4def4c3659080684f337d3cc752 334 SUPERFAMILY SSF50494 110 307 3.16E-22 T 11-10-2018 IPR009003 Peptidase S1, PA clan XFUD_12215 858380421b6f4abb6fe30178e721d51a 278 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 6 253 5.4E-79 T 11-10-2018 IPR014148 P-type conjugative transfer protein VirB9 XFUD_12215 858380421b6f4abb6fe30178e721d51a 278 Pfam PF03524 Conjugal transfer protein 29 251 1.9E-62 T 11-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX XFUD_12215 858380421b6f4abb6fe30178e721d51a 278 Gene3D G3DSA:2.60.40.2500 150 278 1.4E-36 T 11-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily XFUD_10225 602231451e66bbee7da4a77c73f215ba 184 Gene3D G3DSA:3.40.50.2020 2 184 1.4E-45 T 11-10-2018 XFUD_10225 602231451e66bbee7da4a77c73f215ba 184 SUPERFAMILY SSF53271 6 183 4.06E-45 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like XFUD_10225 602231451e66bbee7da4a77c73f215ba 184 Pfam PF00156 Phosphoribosyl transferase domain 16 167 7.8E-23 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XFUD_00180 39eebe53258735d8bd477d22ff15ccf3 179 Pfam PF13302 Acetyltransferase (GNAT) domain 22 160 1.2E-8 T 11-10-2018 IPR000182 GNAT domain XFUD_00180 39eebe53258735d8bd477d22ff15ccf3 179 Gene3D G3DSA:3.40.630.30 13 178 2.4E-29 T 11-10-2018 XFUD_00180 39eebe53258735d8bd477d22ff15ccf3 179 SUPERFAMILY SSF55729 22 165 1.95E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFUD_04000 1e51371ced2faa70bc3762a181bbadab 83 Gene3D G3DSA:2.30.30.90 1 81 9.4E-23 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain XFUD_04000 1e51371ced2faa70bc3762a181bbadab 83 SUPERFAMILY SSF50037 11 77 7.1E-13 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal XFUD_04000 1e51371ced2faa70bc3762a181bbadab 83 SMART SM00899 1 77 2.6E-17 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 XFUD_04000 1e51371ced2faa70bc3762a181bbadab 83 Pfam PF04023 FeoA domain 1 75 1.9E-16 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 XFUD_10750 a9d008566fadadaa4f54bf51e5f673c8 226 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 177 4.2E-44 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XFUD_10750 a9d008566fadadaa4f54bf51e5f673c8 226 PIRSF PIRSF006755 2 224 1.0E-79 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XFUD_10750 a9d008566fadadaa4f54bf51e5f673c8 226 Pfam PF13500 AAA domain 5 210 5.5E-36 T 11-10-2018 XFUD_10750 a9d008566fadadaa4f54bf51e5f673c8 226 SUPERFAMILY SSF52540 1 213 7.64E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_10750 a9d008566fadadaa4f54bf51e5f673c8 226 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 213 26.582 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 XFUD_10750 a9d008566fadadaa4f54bf51e5f673c8 226 Gene3D G3DSA:3.40.50.300 4 216 2.6E-63 T 11-10-2018 XFUD_04905 8582d846e46db3e72848884440ecbc0e 239 Gene3D G3DSA:3.30.300.20 17 107 2.3E-26 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta XFUD_04905 8582d846e46db3e72848884440ecbc0e 239 SUPERFAMILY SSF54814 2 106 5.23E-34 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 XFUD_04905 8582d846e46db3e72848884440ecbc0e 239 SMART SM00322 60 125 4.6E-6 T 11-10-2018 IPR004087 K Homology domain GO:0003676 XFUD_04905 8582d846e46db3e72848884440ecbc0e 239 Pfam PF07650 KH domain 38 111 4.8E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04905 8582d846e46db3e72848884440ecbc0e 239 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 8.0E-87 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 XFUD_04905 8582d846e46db3e72848884440ecbc0e 239 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 36.137 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 XFUD_04905 8582d846e46db3e72848884440ecbc0e 239 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 5.4E-36 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04905 8582d846e46db3e72848884440ecbc0e 239 Gene3D G3DSA:3.30.1140.32 108 208 1.2E-39 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04905 8582d846e46db3e72848884440ecbc0e 239 SUPERFAMILY SSF54821 108 206 6.02E-37 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_11665 c2daf2db7038e3216756b12ae0a2511f 633 PIRSF PIRSF001217 10 633 5.3E-196 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 XFUD_11665 c2daf2db7038e3216756b12ae0a2511f 633 Gene3D G3DSA:3.90.226.10 98 326 3.4E-152 T 11-10-2018 XFUD_11665 c2daf2db7038e3216756b12ae0a2511f 633 Pfam PF01343 Peptidase family S49 143 297 3.7E-23 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 XFUD_11665 c2daf2db7038e3216756b12ae0a2511f 633 Pfam PF01343 Peptidase family S49 400 551 9.2E-48 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 XFUD_11665 c2daf2db7038e3216756b12ae0a2511f 633 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 19 580 3.1E-156 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 XFUD_11665 c2daf2db7038e3216756b12ae0a2511f 633 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 358 549 2.8E-52 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 XFUD_11665 c2daf2db7038e3216756b12ae0a2511f 633 Gene3D G3DSA:3.90.226.10 327 550 3.4E-152 T 11-10-2018 XFUD_11665 c2daf2db7038e3216756b12ae0a2511f 633 Gene3D G3DSA:3.40.1750.10 189 507 3.4E-152 T 11-10-2018 XFUD_11665 c2daf2db7038e3216756b12ae0a2511f 633 SUPERFAMILY SSF52096 331 537 1.25E-38 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFUD_11665 c2daf2db7038e3216756b12ae0a2511f 633 SUPERFAMILY SSF52096 39 290 1.62E-18 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFUD_10365 1a93bf0dfb23f9f07723bc0684c3352e 308 SMART SM00450 208 303 2.5E-11 T 11-10-2018 IPR001763 Rhodanese-like domain XFUD_10365 1a93bf0dfb23f9f07723bc0684c3352e 308 SUPERFAMILY SSF89360 114 201 1.55E-11 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFUD_10365 1a93bf0dfb23f9f07723bc0684c3352e 308 SUPERFAMILY SSF52833 8 104 3.82E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_10365 1a93bf0dfb23f9f07723bc0684c3352e 308 SUPERFAMILY SSF52821 202 303 1.15E-18 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFUD_10365 1a93bf0dfb23f9f07723bc0684c3352e 308 Pfam PF00581 Rhodanese-like domain 210 298 3.4E-7 T 11-10-2018 IPR001763 Rhodanese-like domain XFUD_10365 1a93bf0dfb23f9f07723bc0684c3352e 308 Pfam PF00462 Glutaredoxin 20 84 3.2E-19 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 XFUD_10365 1a93bf0dfb23f9f07723bc0684c3352e 308 Gene3D G3DSA:3.40.250.10 200 304 4.3E-16 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily XFUD_10365 1a93bf0dfb23f9f07723bc0684c3352e 308 Gene3D G3DSA:3.40.30.10 10 104 3.3E-32 T 11-10-2018 XFUD_10365 1a93bf0dfb23f9f07723bc0684c3352e 308 Gene3D G3DSA:2.60.300.12 115 199 2.1E-6 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 XFUD_10365 1a93bf0dfb23f9f07723bc0684c3352e 308 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 9 103 4.4E-41 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related XFUD_03630 899f873a2bfc302b627b712e036c5e41 225 Gene3D G3DSA:3.40.50.150 9 223 3.1E-67 T 11-10-2018 XFUD_03630 899f873a2bfc302b627b712e036c5e41 225 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 145 160 - T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 XFUD_03630 899f873a2bfc302b627b712e036c5e41 225 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 18 220 5.9E-57 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 XFUD_03630 899f873a2bfc302b627b712e036c5e41 225 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 17 225 34.259 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 XFUD_03630 899f873a2bfc302b627b712e036c5e41 225 SUPERFAMILY SSF53335 19 219 9.33E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_03630 899f873a2bfc302b627b712e036c5e41 225 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 23 219 3.0E-52 T 11-10-2018 XFUD_11630 c2f13b0ee30a2bf5989260e2f1f40ccf 167 SMART SM01001 8 159 1.0E-91 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 XFUD_11630 c2f13b0ee30a2bf5989260e2f1f40ccf 167 Gene3D G3DSA:3.40.50.7700 2 166 1.6E-68 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 XFUD_11630 c2f13b0ee30a2bf5989260e2f1f40ccf 167 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 164 3.1E-62 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 XFUD_11630 c2f13b0ee30a2bf5989260e2f1f40ccf 167 PIRSF PIRSF001338 5 167 8.2E-65 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 XFUD_11630 c2f13b0ee30a2bf5989260e2f1f40ccf 167 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 31.908 T 11-10-2018 IPR033747 Class I PurE XFUD_11630 c2f13b0ee30a2bf5989260e2f1f40ccf 167 SUPERFAMILY SSF52255 7 165 3.4E-64 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 XFUD_11630 c2f13b0ee30a2bf5989260e2f1f40ccf 167 Pfam PF00731 AIR carboxylase 10 157 1.4E-60 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 XFUD_12305 9ac66d79dbdbc75514156f8025e5fcb9 55 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 20 51 1.7E-5 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XFUD_12360 3bef8cfc5710dcdf1f2f8c135b5e315d 467 Gene3D G3DSA:2.40.128.260 275 456 8.2E-58 T 11-10-2018 XFUD_12360 3bef8cfc5710dcdf1f2f8c135b5e315d 467 Pfam PF03743 Bacterial conjugation TrbI-like protein 273 458 6.8E-57 T 11-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI XFUD_12360 3bef8cfc5710dcdf1f2f8c135b5e315d 467 Gene3D G3DSA:1.10.1200.160 399 437 8.2E-58 T 11-10-2018 XFUD_03400 fe434def4e7b25e28de2422b5abff431 477 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 18 467 1.6E-160 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_03400 fe434def4e7b25e28de2422b5abff431 477 SUPERFAMILY SSF53244 319 467 1.34E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFUD_03400 fe434def4e7b25e28de2422b5abff431 477 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 473 42.787 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 XFUD_03400 fe434def4e7b25e28de2422b5abff431 477 Gene3D G3DSA:3.40.1190.10 104 316 2.2E-81 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFUD_03400 fe434def4e7b25e28de2422b5abff431 477 SUPERFAMILY SSF53623 101 317 1.31E-70 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFUD_03400 fe434def4e7b25e28de2422b5abff431 477 Gene3D G3DSA:3.40.50.720 17 102 7.4E-31 T 11-10-2018 XFUD_03400 fe434def4e7b25e28de2422b5abff431 477 Pfam PF01225 Mur ligase family, catalytic domain 18 114 1.2E-25 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 XFUD_03400 fe434def4e7b25e28de2422b5abff431 477 Pfam PF08245 Mur ligase middle domain 120 299 1.7E-29 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XFUD_03400 fe434def4e7b25e28de2422b5abff431 477 SUPERFAMILY SSF51984 17 102 1.23E-26 T 11-10-2018 XFUD_03400 fe434def4e7b25e28de2422b5abff431 477 Gene3D G3DSA:3.90.190.20 317 472 6.4E-44 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFUD_03400 fe434def4e7b25e28de2422b5abff431 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 335 410 7.6E-18 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 XFUD_05705 7682fca13d8f97c024c93cef8180ec2a 255 SUPERFAMILY SSF53474 3 251 9.64E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_05705 7682fca13d8f97c024c93cef8180ec2a 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 1 252 40.761 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 XFUD_05705 7682fca13d8f97c024c93cef8180ec2a 255 Pfam PF12697 Alpha/beta hydrolase family 12 242 5.3E-20 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFUD_05705 7682fca13d8f97c024c93cef8180ec2a 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 7 251 5.8E-112 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 XFUD_05705 7682fca13d8f97c024c93cef8180ec2a 255 Gene3D G3DSA:3.40.50.1820 1 254 9.5E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_01865 6caaed83a7f32b4a7c159c158fa0375c 116 SUPERFAMILY SSF103481 78 115 5.36E-5 T 11-10-2018 XFUD_01865 6caaed83a7f32b4a7c159c158fa0375c 116 PIRSF PIRSF021239 5 116 9.5E-50 T 11-10-2018 IPR007437 Protein of unknown function DUF486 XFUD_01865 6caaed83a7f32b4a7c159c158fa0375c 116 Pfam PF04342 Putative member of DMT superfamily (DUF486) 12 114 2.0E-43 T 11-10-2018 IPR007437 Protein of unknown function DUF486 XFUD_11260 97817cede122663c9ab8660c1d63e9b4 192 Gene3D G3DSA:1.10.10.60 127 183 4.1E-20 T 11-10-2018 XFUD_11260 97817cede122663c9ab8660c1d63e9b4 192 SMART SM00448 6 118 2.4E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11260 97817cede122663c9ab8660c1d63e9b4 192 Pfam PF02954 Bacterial regulatory protein, Fis family 147 180 3.0E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFUD_11260 97817cede122663c9ab8660c1d63e9b4 192 Pfam PF00072 Response regulator receiver domain 10 118 1.5E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_11260 97817cede122663c9ab8660c1d63e9b4 192 Gene3D G3DSA:3.40.50.2300 5 124 3.7E-25 T 11-10-2018 XFUD_11260 97817cede122663c9ab8660c1d63e9b4 192 SUPERFAMILY SSF52172 10 122 2.56E-27 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_11260 97817cede122663c9ab8660c1d63e9b4 192 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 147 164 1.3E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFUD_11260 97817cede122663c9ab8660c1d63e9b4 192 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 164 184 1.3E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFUD_11260 97817cede122663c9ab8660c1d63e9b4 192 SUPERFAMILY SSF46689 135 180 5.82E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFUD_10195 5bb3dc6d1d6d066a93282ab765e04333 84 Pfam PF03658 RnfH family Ubiquitin 1 78 1.5E-18 T 11-10-2018 IPR005346 RnfH protein XFUD_10195 5bb3dc6d1d6d066a93282ab765e04333 84 Hamap MF_00460 Protein RnfH [rnfH]. 1 84 18.524 T 11-10-2018 IPR005346 RnfH protein XFUD_10195 5bb3dc6d1d6d066a93282ab765e04333 84 SUPERFAMILY SSF54285 2 70 1.74E-14 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp XFUD_10195 5bb3dc6d1d6d066a93282ab765e04333 84 Gene3D G3DSA:3.10.20.280 1 80 1.3E-18 T 11-10-2018 IPR037021 RnfH superfamily XFUD_01800 2dd7a76d61bf6eeb139bae8ef8027bcf 148 SUPERFAMILY SSF89095 1 147 4.03E-43 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 XFUD_01800 2dd7a76d61bf6eeb139bae8ef8027bcf 148 Gene3D G3DSA:1.10.10.410 91 147 5.4E-19 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal XFUD_01800 2dd7a76d61bf6eeb139bae8ef8027bcf 148 Gene3D G3DSA:1.10.1510.10 1 90 5.5E-30 T 11-10-2018 XFUD_01800 2dd7a76d61bf6eeb139bae8ef8027bcf 148 Pfam PF09424 Yqey-like protein 4 146 1.7E-55 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 945 982 150.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 472 501 0.46 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 748 777 0.026 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 272 301 1100.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 403 435 610.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 912 941 0.43 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 1030 1059 0.082 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 235 264 350.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 439 468 2.5E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 373 402 1.4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 340 369 0.092 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 505 536 580.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 304 336 12.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 846 875 0.0075 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 715 744 320.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SMART SM00248 879 908 14.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SUPERFAMILY SSF48403 240 517 2.17E-51 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 Gene3D G3DSA:1.25.40.20 591 803 8.4E-29 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 Gene3D G3DSA:1.25.40.20 812 1087 1.8E-50 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 Gene3D G3DSA:1.25.40.20 403 564 2.0E-30 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 Gene3D G3DSA:1.25.40.20 232 402 6.0E-31 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 SUPERFAMILY SSF48403 691 1083 1.21E-57 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 Pfam PF12796 Ankyrin repeats (3 copies) 321 400 1.3E-9 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 Pfam PF12796 Ankyrin repeats (3 copies) 697 778 2.8E-7 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 Pfam PF12796 Ankyrin repeats (3 copies) 421 498 5.7E-10 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain XFUD_06955 2808442f1dd08096c530b8b637122fab 1101 Pfam PF12796 Ankyrin repeats (3 copies) 821 904 6.3E-11 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain XFUD_00735 84c97fb48939eedd67478f3739df1bfe 635 Pfam PF05960 Bacterial protein of unknown function (DUF885) 74 609 1.8E-161 T 11-10-2018 IPR010281 Protein of unknown function DUF885 XFUD_05625 57e83c759f84f990edae38d999f94876 180 SUPERFAMILY SSF52540 5 165 8.6E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05625 57e83c759f84f990edae38d999f94876 180 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XFUD_05625 57e83c759f84f990edae38d999f94876 180 Gene3D G3DSA:3.40.50.300 4 179 5.1E-52 T 11-10-2018 XFUD_05625 57e83c759f84f990edae38d999f94876 180 Pfam PF01202 Shikimate kinase 13 166 1.2E-48 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XFUD_05625 57e83c759f84f990edae38d999f94876 180 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 27.958 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 XFUD_05625 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 98 115 1.7E-21 T 11-10-2018 XFUD_05625 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 77 86 1.7E-21 T 11-10-2018 XFUD_05625 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 7 22 1.7E-21 T 11-10-2018 XFUD_05625 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 59 67 1.7E-21 T 11-10-2018 XFUD_05625 57e83c759f84f990edae38d999f94876 180 PRINTS PR01100 Shikimate kinase family signature 31 44 1.7E-21 T 11-10-2018 XFUD_00425 f1ddfd095c261ce03133658d0a68c570 443 Pfam PF04932 O-Antigen ligase 221 373 4.6E-20 T 11-10-2018 IPR007016 O-antigen ligase-related XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 Pfam PF07244 Surface antigen variable number repeat 99 178 2.9E-13 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 Pfam PF07244 Surface antigen variable number repeat 353 426 2.0E-15 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 Pfam PF07244 Surface antigen variable number repeat 33 97 2.0E-4 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 Pfam PF07244 Surface antigen variable number repeat 272 347 4.6E-10 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 Pfam PF07244 Surface antigen variable number repeat 182 269 1.2E-11 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 31 784 5.2E-244 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 Gene3D G3DSA:3.10.20.310 352 427 1.4E-24 T 11-10-2018 XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 Pfam PF01103 Surface antigen 454 784 1.1E-89 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 Gene3D G3DSA:3.10.20.310 98 179 2.2E-18 T 11-10-2018 XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 Gene3D G3DSA:3.10.20.310 271 351 1.3E-16 T 11-10-2018 XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 Gene3D G3DSA:2.40.160.50 432 784 1.3E-104 T 11-10-2018 XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 Gene3D G3DSA:3.10.20.310 24 97 6.3E-21 T 11-10-2018 XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 PIRSF PIRSF006076 1 784 2.9E-250 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 Gene3D G3DSA:3.10.20.310 181 270 2.4E-19 T 11-10-2018 XFUD_04440 dd95c9ded2974e677cd2b5911ff59bd1 784 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 8 784 24.998 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 XFUD_05635 a0f3034934cffb38bd5e7fb3f830bf91 199 SUPERFAMILY SSF50475 4 199 5.3E-55 T 11-10-2018 XFUD_05635 a0f3034934cffb38bd5e7fb3f830bf91 199 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 168 181 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XFUD_05635 a0f3034934cffb38bd5e7fb3f830bf91 199 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 158 199 4.5E-10 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XFUD_05635 a0f3034934cffb38bd5e7fb3f830bf91 199 Gene3D G3DSA:2.30.110.10 3 199 6.3E-66 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 XFUD_05635 a0f3034934cffb38bd5e7fb3f830bf91 199 PIRSF PIRSF000190 3 199 1.2E-61 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XFUD_05635 a0f3034934cffb38bd5e7fb3f830bf91 199 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 4 199 33.733 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XFUD_05635 a0f3034934cffb38bd5e7fb3f830bf91 199 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 26 104 9.1E-25 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XFUD_05635 a0f3034934cffb38bd5e7fb3f830bf91 199 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 5 193 9.6E-58 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 XFUD_10220 fe9272660cecdb50aee3e26065b7b186 237 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 4 236 31.555 T 11-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 XFUD_10220 fe9272660cecdb50aee3e26065b7b186 237 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 52 92 - T 11-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 XFUD_10220 fe9272660cecdb50aee3e26065b7b186 237 SUPERFAMILY SSF53167 5 233 1.39E-72 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 XFUD_10220 fe9272660cecdb50aee3e26065b7b186 237 Pfam PF01048 Phosphorylase superfamily 6 219 1.1E-37 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 XFUD_10220 fe9272660cecdb50aee3e26065b7b186 237 Gene3D G3DSA:3.40.50.1580 1 236 4.4E-74 T 11-10-2018 XFUD_06825 418765d00cec45c9f0a4ea0302f30414 78 Pfam PF04102 SlyX 14 78 2.0E-13 T 11-10-2018 IPR007236 SlyX XFUD_06825 418765d00cec45c9f0a4ea0302f30414 78 Gene3D G3DSA:1.20.5.300 1 59 1.5E-32 T 11-10-2018 XFUD_06825 418765d00cec45c9f0a4ea0302f30414 78 Hamap MF_00715 Protein SlyX [slyX]. 12 78 13.466 T 11-10-2018 IPR007236 SlyX XFUD_11135 e2a378644853b6e79cb32abb205f0eb7 833 Pfam PF00326 Prolyl oligopeptidase family 661 818 1.1E-21 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 XFUD_11135 e2a378644853b6e79cb32abb205f0eb7 833 SUPERFAMILY SSF82171 107 492 4.32E-10 T 11-10-2018 XFUD_11135 e2a378644853b6e79cb32abb205f0eb7 833 Gene3D G3DSA:3.40.50.1820 559 825 8.4E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_11135 e2a378644853b6e79cb32abb205f0eb7 833 SUPERFAMILY SSF53474 564 818 7.16E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_10385 0455034d120d68b5f5b95c0133249838 473 Pfam PF13437 HlyD family secretion protein 324 430 6.7E-19 T 11-10-2018 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 55 473 2.6E-121 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:2.40.50.100 94 128 1.6E-6 T 11-10-2018 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:2.40.50.100 325 361 2.4E-17 T 11-10-2018 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 ProSitePatterns PS00543 HlyD family secretion proteins signature. 437 459 - T 11-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:1.10.287.470 259 324 2.4E-17 T 11-10-2018 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:1.10.287.470 129 221 1.6E-6 T 11-10-2018 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:2.40.30.170 362 450 2.4E-17 T 11-10-2018 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 Gene3D G3DSA:2.40.30.170 83 93 1.6E-6 T 11-10-2018 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 437 452 5.4E-59 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 370 394 5.4E-59 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 337 358 5.4E-59 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 394 417 5.4E-59 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 452 472 5.4E-59 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 88 5.4E-59 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFUD_10385 0455034d120d68b5f5b95c0133249838 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 107 127 5.4E-59 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 XFUD_00815 524e00660c1453e210790658f4420798 244 Pfam PF04452 RNA methyltransferase 21 239 7.0E-72 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 XFUD_00815 524e00660c1453e210790658f4420798 244 Gene3D G3DSA:3.40.1280.10 74 244 5.4E-58 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XFUD_00815 524e00660c1453e210790658f4420798 244 SUPERFAMILY SSF75217 74 244 1.99E-51 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases XFUD_00815 524e00660c1453e210790658f4420798 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 244 1.5E-53 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 XFUD_00815 524e00660c1453e210790658f4420798 244 Gene3D G3DSA:2.40.240.20 1 68 9.5E-16 T 11-10-2018 XFUD_00815 524e00660c1453e210790658f4420798 244 SUPERFAMILY SSF88697 3 69 3.73E-14 T 11-10-2018 IPR015947 PUA-like superfamily XFUD_00815 524e00660c1453e210790658f4420798 244 PIRSF PIRSF015601 5 244 1.0E-55 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 XFUD_03600 f8dc32706f2e71dd97dda9367516d5c8 435 Gene3D G3DSA:3.50.50.60 1 72 1.4E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_03600 f8dc32706f2e71dd97dda9367516d5c8 435 SUPERFAMILY SSF51905 1 416 2.98E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_03600 f8dc32706f2e71dd97dda9367516d5c8 435 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 46.206 T 11-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 XFUD_03600 f8dc32706f2e71dd97dda9367516d5c8 435 SUPERFAMILY SSF54373 270 360 3.79E-16 T 11-10-2018 XFUD_03600 f8dc32706f2e71dd97dda9367516d5c8 435 Gene3D G3DSA:3.50.50.60 105 400 6.4E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_03600 f8dc32706f2e71dd97dda9367516d5c8 435 Pfam PF01266 FAD dependent oxidoreductase 3 398 1.6E-69 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 XFUD_03600 f8dc32706f2e71dd97dda9367516d5c8 435 Gene3D G3DSA:3.30.9.10 134 362 6.4E-51 T 11-10-2018 XFUD_01980 0f13d4a89ec79d8878ac09bd68d6d2b3 151 Pfam PF07963 Prokaryotic N-terminal methylation motif 27 45 1.5E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_01980 0f13d4a89ec79d8878ac09bd68d6d2b3 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 60 78 4.0E-7 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 XFUD_01980 0f13d4a89ec79d8878ac09bd68d6d2b3 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 24 49 4.0E-7 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 XFUD_01980 0f13d4a89ec79d8878ac09bd68d6d2b3 151 SUPERFAMILY SSF54523 27 140 1.52E-22 T 11-10-2018 XFUD_01980 0f13d4a89ec79d8878ac09bd68d6d2b3 151 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 27 45 3.0E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_01980 0f13d4a89ec79d8878ac09bd68d6d2b3 151 Gene3D G3DSA:3.30.700.10 26 150 3.1E-20 T 11-10-2018 XFUD_01980 0f13d4a89ec79d8878ac09bd68d6d2b3 151 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 46 132 6.1E-24 T 11-10-2018 IPR031982 Type IV minor pilin ComP XFUD_08540 22e6e2c108ec721c996693764d6fb90d 338 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 195 4.9E-9 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XFUD_08540 22e6e2c108ec721c996693764d6fb90d 338 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 253 333 1.0E-19 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XFUD_08540 22e6e2c108ec721c996693764d6fb90d 338 Gene3D G3DSA:3.40.47.10 1 198 2.2E-69 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_08540 22e6e2c108ec721c996693764d6fb90d 338 Gene3D G3DSA:3.40.47.10 199 338 1.4E-35 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_08540 22e6e2c108ec721c996693764d6fb90d 338 SUPERFAMILY SSF53901 41 338 6.47E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_12130 d31aa3f0a33718d53fad350049a0f7bc 903 SUPERFAMILY SSF52129 471 700 3.98E-17 T 11-10-2018 IPR029030 Caspase-like domain superfamily XFUD_12130 d31aa3f0a33718d53fad350049a0f7bc 903 Gene3D G3DSA:3.20.20.370 221 450 6.4E-51 T 11-10-2018 XFUD_12130 d31aa3f0a33718d53fad350049a0f7bc 903 SUPERFAMILY SSF88713 236 447 5.68E-47 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XFUD_12130 d31aa3f0a33718d53fad350049a0f7bc 903 Pfam PF01522 Polysaccharide deacetylase 250 382 4.7E-27 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XFUD_12130 d31aa3f0a33718d53fad350049a0f7bc 903 ProSitePatterns PS00018 EF-hand calcium-binding domain. 671 683 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site XFUD_12130 d31aa3f0a33718d53fad350049a0f7bc 903 Pfam PF00656 Caspase domain 477 670 7.5E-23 T 11-10-2018 XFUD_12130 d31aa3f0a33718d53fad350049a0f7bc 903 Gene3D G3DSA:3.40.50.1460 474 707 5.9E-32 T 11-10-2018 XFUD_12130 d31aa3f0a33718d53fad350049a0f7bc 903 SUPERFAMILY SSF48452 770 892 6.32E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_12130 d31aa3f0a33718d53fad350049a0f7bc 903 Gene3D G3DSA:1.25.40.10 785 899 8.9E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_06350 3948148a6c54245c982e6c9ebd5191bd 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 4.0E-35 T 11-10-2018 IPR013527 YicC-like, N-terminal XFUD_06350 3948148a6c54245c982e6c9ebd5191bd 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 6.7E-78 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 XFUD_06350 3948148a6c54245c982e6c9ebd5191bd 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 9.3E-35 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 XFUD_05995 67bde8741da3070cd265b4c14283c579 262 Pfam PF13098 Thioredoxin-like domain 129 251 1.0E-23 T 11-10-2018 IPR012336 Thioredoxin-like fold XFUD_05995 67bde8741da3070cd265b4c14283c579 262 Gene3D G3DSA:3.10.450.70 40 97 2.0E-10 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 XFUD_05995 67bde8741da3070cd265b4c14283c579 262 SUPERFAMILY SSF54423 53 100 1.41E-10 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 XFUD_05995 67bde8741da3070cd265b4c14283c579 262 Pfam PF10411 Disulfide bond isomerase protein N-terminus 47 99 7.2E-16 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal XFUD_05995 67bde8741da3070cd265b4c14283c579 262 Gene3D G3DSA:3.40.30.10 98 255 2.1E-45 T 11-10-2018 XFUD_05995 67bde8741da3070cd265b4c14283c579 262 SUPERFAMILY SSF52833 112 253 6.28E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_01340 458ee582098d6b3926b91b1e0fb4cab3 175 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 174 9.1E-62 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01340 458ee582098d6b3926b91b1e0fb4cab3 175 Gene3D G3DSA:1.10.10.1590 18 90 5.5E-21 T 11-10-2018 XFUD_01340 458ee582098d6b3926b91b1e0fb4cab3 175 SUPERFAMILY SSF52833 20 174 5.37E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_01340 458ee582098d6b3926b91b1e0fb4cab3 175 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 27 174 2.3E-46 T 11-10-2018 XFUD_01340 458ee582098d6b3926b91b1e0fb4cab3 175 PIRSF PIRSF000216 8 175 4.5E-51 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01340 458ee582098d6b3926b91b1e0fb4cab3 175 Gene3D G3DSA:3.40.30.10 92 175 1.9E-22 T 11-10-2018 XFUD_05565 e22b6ecafa40231af7cd0fea6870fc2e 269 SUPERFAMILY SSF52540 4 267 2.23E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05565 e22b6ecafa40231af7cd0fea6870fc2e 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 266 6.1E-113 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 XFUD_05565 e22b6ecafa40231af7cd0fea6870fc2e 269 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 226 1.8E-22 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain XFUD_05565 e22b6ecafa40231af7cd0fea6870fc2e 269 PIRSF PIRSF003092 1 269 1.7E-91 T 11-10-2018 IPR025501 ATP binding protein MinD XFUD_05565 e22b6ecafa40231af7cd0fea6870fc2e 269 Gene3D G3DSA:3.40.50.300 1 259 1.3E-66 T 11-10-2018 XFUD_09975 902bc0e88b2daed9055f194f849a3836 470 SUPERFAMILY SSF52540 117 396 3.19E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_09975 902bc0e88b2daed9055f194f849a3836 470 Gene3D G3DSA:3.40.50.300 253 400 3.9E-5 T 11-10-2018 XFUD_09975 902bc0e88b2daed9055f194f849a3836 470 Pfam PF00176 SNF2 family N-terminal domain 25 260 1.9E-15 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 XFUD_09975 902bc0e88b2daed9055f194f849a3836 470 SUPERFAMILY SSF52540 2 202 2.33E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_09975 902bc0e88b2daed9055f194f849a3836 470 SMART SM00487 2 188 5.8E-7 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_09975 902bc0e88b2daed9055f194f849a3836 470 Gene3D G3DSA:3.40.50.10810 4 228 3.0E-23 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily XFUD_07405 d0605e9793639a2b02382b1137616e82 393 SUPERFAMILY SSF103473 14 385 7.59E-43 T 11-10-2018 IPR036259 MFS transporter superfamily XFUD_07405 d0605e9793639a2b02382b1137616e82 393 Pfam PF07690 Major Facilitator Superfamily 19 348 1.5E-31 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XFUD_07405 d0605e9793639a2b02382b1137616e82 393 Gene3D G3DSA:1.20.1250.20 12 385 8.8E-39 T 11-10-2018 XFUD_11710 0957b5e887216dac64140493e8cdfb84 312 PIRSF PIRSF003097 17 308 2.7E-48 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 XFUD_05485 84741f94ee424b3fe935c98709afd56a 308 Pfam PF02470 MlaD protein 40 115 2.1E-14 T 11-10-2018 IPR003399 Mce/MlaD XFUD_09840 e9a854258564bbc440e1bda50948a4c9 688 Pfam PF07676 WD40-like Beta Propeller Repeat 90 114 0.0053 T 11-10-2018 IPR011659 WD40-like Beta Propeller XFUD_09840 e9a854258564bbc440e1bda50948a4c9 688 Pfam PF07676 WD40-like Beta Propeller Repeat 281 303 0.019 T 11-10-2018 IPR011659 WD40-like Beta Propeller XFUD_09840 e9a854258564bbc440e1bda50948a4c9 688 SUPERFAMILY SSF82171 33 416 6.67E-34 T 11-10-2018 XFUD_09840 e9a854258564bbc440e1bda50948a4c9 688 Pfam PF00326 Prolyl oligopeptidase family 478 687 9.5E-60 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 XFUD_09840 e9a854258564bbc440e1bda50948a4c9 688 Gene3D G3DSA:2.120.10.30 18 178 1.2E-20 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XFUD_09840 e9a854258564bbc440e1bda50948a4c9 688 Gene3D G3DSA:2.120.10.30 188 423 2.4E-17 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XFUD_09840 e9a854258564bbc440e1bda50948a4c9 688 SUPERFAMILY SSF53474 431 686 1.12E-68 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_09840 e9a854258564bbc440e1bda50948a4c9 688 Gene3D G3DSA:3.40.50.1820 424 686 5.8E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_02475 6473cd921007656a3b0b1497d01f5409 109 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 25 86 5.8E-25 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain XFUD_02475 6473cd921007656a3b0b1497d01f5409 109 SUPERFAMILY SSF47781 24 89 2.33E-25 T 11-10-2018 IPR010994 RuvA domain 2-like XFUD_02475 6473cd921007656a3b0b1497d01f5409 109 Pfam PF12836 Helix-hairpin-helix motif 23 86 5.8E-23 T 11-10-2018 XFUD_02475 6473cd921007656a3b0b1497d01f5409 109 Gene3D G3DSA:1.10.150.280 18 91 1.3E-20 T 11-10-2018 XFUD_09320 eed920ea9a46991d56b2dba9fcebd4b4 265 Gene3D G3DSA:1.10.8.100 201 264 5.9E-21 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 XFUD_09320 eed920ea9a46991d56b2dba9fcebd4b4 265 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 8 264 53.176 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 XFUD_09320 eed920ea9a46991d56b2dba9fcebd4b4 265 SUPERFAMILY SSF53335 16 262 8.36E-77 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_09320 eed920ea9a46991d56b2dba9fcebd4b4 265 Pfam PF00398 Ribosomal RNA adenine dimethylase 10 262 4.6E-66 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm XFUD_09320 eed920ea9a46991d56b2dba9fcebd4b4 265 Gene3D G3DSA:3.40.50.150 5 198 2.3E-64 T 11-10-2018 XFUD_09320 eed920ea9a46991d56b2dba9fcebd4b4 265 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 262 2.6E-82 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 XFUD_09320 eed920ea9a46991d56b2dba9fcebd4b4 265 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 40 67 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 XFUD_09320 eed920ea9a46991d56b2dba9fcebd4b4 265 SMART SM00650 24 197 6.7E-85 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 XFUD_08800 67a47469e55bcac775b456379c6ff050 76 Pfam PF04255 Protein of unknown function (DUF433) 7 62 1.3E-22 T 11-10-2018 IPR007367 Protein of unknown function DUF433 XFUD_08800 67a47469e55bcac775b456379c6ff050 76 Gene3D G3DSA:1.10.10.10 6 75 5.1E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_08800 67a47469e55bcac775b456379c6ff050 76 SUPERFAMILY SSF46689 2 73 2.87E-23 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFUD_02600 ad2c73bc804dd661a09b3414404dd6af 282 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 3 274 31.945 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 XFUD_02600 ad2c73bc804dd661a09b3414404dd6af 282 SUPERFAMILY SSF51735 103 273 2.02E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_02600 ad2c73bc804dd661a09b3414404dd6af 282 Gene3D G3DSA:3.40.50.10860 6 263 1.8E-74 T 11-10-2018 XFUD_02600 ad2c73bc804dd661a09b3414404dd6af 282 SUPERFAMILY SSF53223 4 102 2.59E-30 T 11-10-2018 XFUD_02600 ad2c73bc804dd661a09b3414404dd6af 282 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 192 7.3E-10 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase XFUD_02600 ad2c73bc804dd661a09b3414404dd6af 282 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 6 274 2.0E-71 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 XFUD_02600 ad2c73bc804dd661a09b3414404dd6af 282 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 8 90 8.6E-27 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 XFUD_02600 ad2c73bc804dd661a09b3414404dd6af 282 Gene3D G3DSA:3.40.50.720 102 242 1.8E-74 T 11-10-2018 XFUD_00355 7fcfbc7f93e93e4c7747f309a9d8dc9e 435 Gene3D G3DSA:1.20.1250.20 20 430 8.7E-63 T 11-10-2018 XFUD_00355 7fcfbc7f93e93e4c7747f309a9d8dc9e 435 Pfam PF00083 Sugar (and other) transporter 23 221 6.8E-24 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 XFUD_00355 7fcfbc7f93e93e4c7747f309a9d8dc9e 435 Pfam PF00083 Sugar (and other) transporter 228 420 2.4E-9 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 XFUD_00355 7fcfbc7f93e93e4c7747f309a9d8dc9e 435 SUPERFAMILY SSF103473 17 427 5.62E-63 T 11-10-2018 IPR036259 MFS transporter superfamily XFUD_00355 7fcfbc7f93e93e4c7747f309a9d8dc9e 435 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 XFUD_05120 05928c7b83f022af04cbbbcbf529fe9c 185 Pfam PF07209 Protein of unknown function (DUF1415) 11 176 1.3E-67 T 11-10-2018 IPR009858 Protein of unknown function DUF1415 XFUD_01615 c05dfdf0b94fd752f147cd4ffa43c615 136 Pfam PF03203 MerC mercury resistance protein 11 122 3.0E-21 T 11-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 XFUD_12270 75a4f1a32d26e9b9267a4247e3bfc08b 79 Gene3D G3DSA:1.10.1220.10 1 51 6.5E-31 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XFUD_12270 75a4f1a32d26e9b9267a4247e3bfc08b 79 Pfam PF16762 Ribbon-helix-helix domain 2 78 1.8E-40 T 11-10-2018 IPR031914 XACb0070, ribbon-helix-helix domain XFUD_07895 421367cca27a8a12a0cd3ffabdfbcd49 335 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 8 317 1.5E-124 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XFUD_07895 421367cca27a8a12a0cd3ffabdfbcd49 335 SUPERFAMILY SSF51735 6 173 5.86E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_07895 421367cca27a8a12a0cd3ffabdfbcd49 335 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 8 167 5.2E-68 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XFUD_07895 421367cca27a8a12a0cd3ffabdfbcd49 335 Gene3D G3DSA:3.40.50.720 3 172 5.1E-67 T 11-10-2018 XFUD_07895 421367cca27a8a12a0cd3ffabdfbcd49 335 SUPERFAMILY SSF48179 174 327 1.87E-68 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XFUD_07895 421367cca27a8a12a0cd3ffabdfbcd49 335 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 319 42.467 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XFUD_07895 421367cca27a8a12a0cd3ffabdfbcd49 335 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 174 317 3.7E-63 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XFUD_07895 421367cca27a8a12a0cd3ffabdfbcd49 335 PIRSF PIRSF000116 2 198 2.1E-40 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XFUD_07895 421367cca27a8a12a0cd3ffabdfbcd49 335 PIRSF PIRSF000116 192 323 5.2E-13 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 XFUD_07895 421367cca27a8a12a0cd3ffabdfbcd49 335 Gene3D G3DSA:1.10.3730.40 173 328 2.7E-70 T 11-10-2018 XFUD_08745 d1a6d3d723b2ddc694b3d3adbfb7ffa1 545 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 541 9.0E-127 T 11-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 XFUD_08745 d1a6d3d723b2ddc694b3d3adbfb7ffa1 545 Pfam PF00999 Sodium/hydrogen exchanger family 11 419 4.4E-65 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 XFUD_01500 45a12706ee869ed7600ffdf4f6513b10 127 Gene3D G3DSA:3.30.1330.40 2 127 7.0E-50 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XFUD_01500 45a12706ee869ed7600ffdf4f6513b10 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 125 1.0E-48 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 XFUD_01500 45a12706ee869ed7600ffdf4f6513b10 127 SUPERFAMILY SSF55298 1 126 1.38E-44 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XFUD_01500 45a12706ee869ed7600ffdf4f6513b10 127 Pfam PF01042 Endoribonuclease L-PSP 9 125 9.9E-40 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 XFUD_01305 e64ffd9b5cbead128523e1ec20c1792a 249 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 247 56.094 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01305 e64ffd9b5cbead128523e1ec20c1792a 249 Gene3D G3DSA:3.20.20.70 1 249 9.0E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_01305 e64ffd9b5cbead128523e1ec20c1792a 249 Pfam PF00121 Triosephosphate isomerase 4 244 3.9E-87 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01305 e64ffd9b5cbead128523e1ec20c1792a 249 SUPERFAMILY SSF51351 1 247 1.2E-82 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01305 e64ffd9b5cbead128523e1ec20c1792a 249 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_01305 e64ffd9b5cbead128523e1ec20c1792a 249 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 6.9E-59 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_10815 3572f5ac7e32f2b3f9928df825eabd30 100 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 5 99 1.1E-34 T 11-10-2018 IPR031451 mRNA interferase toxin MqsR GO:0009372|GO:0017148|GO:0044010 XFUD_10815 3572f5ac7e32f2b3f9928df825eabd30 100 Gene3D G3DSA:3.30.2310.40 1 100 8.1E-38 T 11-10-2018 IPR038493 Toxin MqsR superfamily XFUD_02435 741d866cd00605a732e8abe4a65fc5f2 285 Pfam PF11306 Protein of unknown function (DUF3108) 52 266 2.5E-22 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 XFUD_07485 11240be6034a1cbe0f9a61666e05ca9a 338 Pfam PF01738 Dienelactone hydrolase family 65 169 4.9E-9 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 XFUD_07485 11240be6034a1cbe0f9a61666e05ca9a 338 SUPERFAMILY SSF53474 28 337 6.55E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_07485 11240be6034a1cbe0f9a61666e05ca9a 338 Gene3D G3DSA:1.10.10.800 176 266 6.4E-107 T 11-10-2018 XFUD_07485 11240be6034a1cbe0f9a61666e05ca9a 338 Gene3D G3DSA:3.40.50.1820 41 321 6.4E-107 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_11370 8e8dd78108e24c0fdb737b81f25a8998 137 SUPERFAMILY SSF74653 35 116 6.54E-20 T 11-10-2018 XFUD_11370 8e8dd78108e24c0fdb737b81f25a8998 137 Gene3D G3DSA:3.30.1150.10 19 117 1.6E-22 T 11-10-2018 XFUD_11370 8e8dd78108e24c0fdb737b81f25a8998 137 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 42 118 7.2E-21 T 11-10-2018 IPR006260 TonB/TolA, C-terminal XFUD_11370 8e8dd78108e24c0fdb737b81f25a8998 137 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 40 117 4.6E-20 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 XFUD_00365 2befb4597ed22ab182d9b09736203d9d 92 SUPERFAMILY SSF50182 7 68 4.62E-24 T 11-10-2018 IPR010920 LSM domain superfamily XFUD_00365 2befb4597ed22ab182d9b09736203d9d 92 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.485 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 XFUD_00365 2befb4597ed22ab182d9b09736203d9d 92 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 9.6E-30 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 XFUD_00365 2befb4597ed22ab182d9b09736203d9d 92 Pfam PF17209 Hfq protein 7 68 6.9E-31 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 XFUD_00365 2befb4597ed22ab182d9b09736203d9d 92 Gene3D G3DSA:2.30.30.100 1 70 7.4E-33 T 11-10-2018 XFUD_07990 7a6cddb3fffdb146ccacb40baa4af2ba 492 Gene3D G3DSA:1.10.3430.10 65 492 6.5E-137 T 11-10-2018 IPR029020 Ammonium/urea transporter XFUD_07990 7a6cddb3fffdb146ccacb40baa4af2ba 492 TIGRFAM TIGR00836 amt: ammonium transporter 88 490 2.7E-129 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 XFUD_07990 7a6cddb3fffdb146ccacb40baa4af2ba 492 Pfam PF00909 Ammonium Transporter Family 90 490 4.4E-117 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 XFUD_07990 7a6cddb3fffdb146ccacb40baa4af2ba 492 ProSitePatterns PS01219 Ammonium transporters signature. 246 271 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 XFUD_07990 7a6cddb3fffdb146ccacb40baa4af2ba 492 SUPERFAMILY SSF111352 84 471 9.68E-124 T 11-10-2018 XFUD_08600 2bf34300b52828364dfb9108bad20022 187 SUPERFAMILY SSF51161 3 174 4.85E-45 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFUD_08600 2bf34300b52828364dfb9108bad20022 187 Gene3D G3DSA:2.160.10.10 3 186 4.2E-60 T 11-10-2018 XFUD_08600 2bf34300b52828364dfb9108bad20022 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 1.3E-6 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_08600 2bf34300b52828364dfb9108bad20022 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 0.0013 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_09425 68423c1d7e8057aa49c6d66a6cae6883 343 Gene3D G3DSA:1.10.8.60 144 212 1.3E-20 T 11-10-2018 XFUD_09425 68423c1d7e8057aa49c6d66a6cae6883 343 SUPERFAMILY SSF52540 2 210 5.93E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_09425 68423c1d7e8057aa49c6d66a6cae6883 343 SUPERFAMILY SSF48019 212 334 2.04E-22 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 XFUD_09425 68423c1d7e8057aa49c6d66a6cae6883 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 5.7E-22 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 XFUD_09425 68423c1d7e8057aa49c6d66a6cae6883 343 Gene3D G3DSA:1.20.272.10 214 341 1.6E-23 T 11-10-2018 XFUD_09425 68423c1d7e8057aa49c6d66a6cae6883 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 333 8.8E-96 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 XFUD_09425 68423c1d7e8057aa49c6d66a6cae6883 343 Gene3D G3DSA:3.40.50.300 1 138 1.8E-38 T 11-10-2018 XFUD_07755 aaa330057070856bf5711ebdf655b450 317 Gene3D G3DSA:1.10.10.10 3 59 3.3E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_07755 aaa330057070856bf5711ebdf655b450 317 Gene3D G3DSA:2.30.30.100 270 317 3.3E-9 T 11-10-2018 XFUD_07755 aaa330057070856bf5711ebdf655b450 317 SUPERFAMILY SSF50037 271 315 5.04E-6 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal XFUD_07755 aaa330057070856bf5711ebdf655b450 317 Pfam PF08279 HTH domain 14 53 1.3E-5 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 XFUD_07755 aaa330057070856bf5711ebdf655b450 317 Pfam PF02237 Biotin protein ligase C terminal domain 271 315 5.2E-9 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XFUD_07755 aaa330057070856bf5711ebdf655b450 317 Pfam PF03099 Biotin/lipoate A/B protein ligase family 103 199 4.8E-11 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 XFUD_07755 aaa330057070856bf5711ebdf655b450 317 SUPERFAMILY SSF55681 82 266 4.47E-47 T 11-10-2018 XFUD_07755 aaa330057070856bf5711ebdf655b450 317 Gene3D G3DSA:3.30.930.10 61 268 2.3E-50 T 11-10-2018 XFUD_07755 aaa330057070856bf5711ebdf655b450 317 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 314 5.5E-46 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 XFUD_04625 8b61f0b66fc6cb54d5210c2beb8c9dd5 190 SMART SM00867 24 184 1.6E-16 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XFUD_04625 8b61f0b66fc6cb54d5210c2beb8c9dd5 190 Pfam PF04264 YceI-like domain 26 180 9.0E-16 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like XFUD_04625 8b61f0b66fc6cb54d5210c2beb8c9dd5 190 Gene3D G3DSA:2.40.128.110 25 181 3.4E-17 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XFUD_04625 8b61f0b66fc6cb54d5210c2beb8c9dd5 190 SUPERFAMILY SSF101874 22 184 1.44E-23 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily XFUD_07845 32c850f955a50d339a246d0505d3eb28 319 Pfam PF01882 Protein of unknown function DUF58 213 287 7.7E-13 T 11-10-2018 IPR002881 Domain of unknown function DUF58 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 Gene3D G3DSA:3.30.540.10 1 139 6.3E-46 T 11-10-2018 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 Gene3D G3DSA:3.40.190.80 140 267 4.1E-34 T 11-10-2018 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 SUPERFAMILY SSF56655 4 262 4.84E-78 T 11-10-2018 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 2.6E-17 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 2.6E-17 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 2.6E-17 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 2.6E-17 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 3.5E-55 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 3.5E-55 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 3.5E-55 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 3.5E-55 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 3.5E-55 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 3.5E-55 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 XFUD_10745 e43801e4a88f55af21378405e671ecfe 275 Pfam PF00459 Inositol monophosphatase family 4 251 4.5E-62 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFUD_02090 faa41fb9111620dbc29b8df3722bcf01 98 SUPERFAMILY SSF47413 7 68 3.67E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_02090 faa41fb9111620dbc29b8df3722bcf01 98 Gene3D G3DSA:1.10.260.40 5 66 6.7E-25 T 11-10-2018 XFUD_02090 faa41fb9111620dbc29b8df3722bcf01 98 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 7 71 4.1E-32 T 11-10-2018 IPR031856 Putative bacterial antitoxin YdaS XFUD_08605 05a19f46646a06cc1f685f9c8168f758 249 SMART SM00967 7 83 1.1E-12 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 XFUD_08605 05a19f46646a06cc1f685f9c8168f758 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 6 246 1.3E-70 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 XFUD_08605 05a19f46646a06cc1f685f9c8168f758 249 Gene3D G3DSA:3.40.1280.10 81 247 3.6E-58 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XFUD_08605 05a19f46646a06cc1f685f9c8168f758 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 5 247 39.451 T 11-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB XFUD_08605 05a19f46646a06cc1f685f9c8168f758 249 Pfam PF00588 SpoU rRNA Methylase family 100 239 6.8E-39 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 XFUD_08605 05a19f46646a06cc1f685f9c8168f758 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 81 1.4E-11 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 XFUD_08605 05a19f46646a06cc1f685f9c8168f758 249 Gene3D G3DSA:3.30.1330.30 1 78 3.0E-15 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like XFUD_08605 05a19f46646a06cc1f685f9c8168f758 249 SUPERFAMILY SSF55315 1 76 1.07E-14 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like XFUD_08605 05a19f46646a06cc1f685f9c8168f758 249 SUPERFAMILY SSF75217 75 247 1.44E-48 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases XFUD_05335 589595718f2c6e51cc27479d9730686d 273 Pfam PF03618 Kinase/pyrophosphorylase 7 263 2.0E-69 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 XFUD_05335 589595718f2c6e51cc27479d9730686d 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 4 272 72.493 T 11-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein XFUD_09925 2e7e48e407acf7b64772fac428452261 317 Pfam PF00753 Metallo-beta-lactamase superfamily 66 251 7.8E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFUD_09925 2e7e48e407acf7b64772fac428452261 317 SMART SM00849 66 251 4.1E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFUD_09925 2e7e48e407acf7b64772fac428452261 317 SUPERFAMILY SSF56281 49 275 2.1E-41 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFUD_09925 2e7e48e407acf7b64772fac428452261 317 Gene3D G3DSA:3.60.15.10 48 286 7.7E-32 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFUD_07110 fbbed45ada60f19874451c2113eff6fc 111 Gene3D G3DSA:1.20.5.780 70 110 9.1E-6 T 11-10-2018 XFUD_07110 fbbed45ada60f19874451c2113eff6fc 111 Pfam PF05534 HicB family 55 105 6.1E-24 T 11-10-2018 IPR008651 Uncharacterised protein family HicB XFUD_07110 fbbed45ada60f19874451c2113eff6fc 111 SUPERFAMILY SSF47598 70 109 1.91E-8 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XFUD_10610 3ad480fba64a77c39c0a5c757bdada7f 430 Pfam PF13416 Bacterial extracellular solute-binding protein 43 352 2.6E-37 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein XFUD_10610 3ad480fba64a77c39c0a5c757bdada7f 430 Gene3D G3DSA:3.40.190.10 41 368 1.2E-134 T 11-10-2018 XFUD_10610 3ad480fba64a77c39c0a5c757bdada7f 430 Gene3D G3DSA:3.40.190.10 141 405 1.2E-134 T 11-10-2018 XFUD_10610 3ad480fba64a77c39c0a5c757bdada7f 430 SUPERFAMILY SSF53850 27 406 2.1E-82 T 11-10-2018 XFUD_08660 fabaf4de59a16c7851fc9b17567bf576 90 PIRSF PIRSF002097 2 90 3.6E-34 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XFUD_08660 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 70 90 8.4E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFUD_08660 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 53 70 8.4E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFUD_08660 fabaf4de59a16c7851fc9b17567bf576 90 SUPERFAMILY SSF46689 4 89 4.3E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 XFUD_08660 fabaf4de59a16c7851fc9b17567bf576 90 Pfam PF02954 Bacterial regulatory protein, Fis family 48 87 8.1E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 XFUD_08660 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01591 DNA-binding protein FIS signature 18 34 5.3E-9 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XFUD_08660 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01591 DNA-binding protein FIS signature 34 49 5.3E-9 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XFUD_08660 fabaf4de59a16c7851fc9b17567bf576 90 PRINTS PR01591 DNA-binding protein FIS signature 49 61 5.3E-9 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 XFUD_08660 fabaf4de59a16c7851fc9b17567bf576 90 Gene3D G3DSA:1.10.10.60 3 89 6.8E-27 T 11-10-2018 XFUD_07995 43b77b03b4e4008b919d3e1efaa0dfe4 161 Pfam PF01131 DNA topoisomerase 2 117 1.4E-17 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 XFUD_07995 43b77b03b4e4008b919d3e1efaa0dfe4 161 Gene3D G3DSA:1.10.290.10 80 140 2.2E-27 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 XFUD_07995 43b77b03b4e4008b919d3e1efaa0dfe4 161 Gene3D G3DSA:2.70.20.10 10 79 2.2E-27 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 XFUD_07995 43b77b03b4e4008b919d3e1efaa0dfe4 161 SUPERFAMILY SSF56712 2 117 2.49E-24 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain XFUD_00805 76dd47103ed4eed702d89e85de291a33 182 Pfam PF00293 NUDIX domain 46 161 4.1E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XFUD_00805 76dd47103ed4eed702d89e85de291a33 182 SUPERFAMILY SSF55811 19 178 6.5E-35 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XFUD_00805 76dd47103ed4eed702d89e85de291a33 182 Gene3D G3DSA:3.90.79.10 14 182 4.2E-42 T 11-10-2018 XFUD_00805 76dd47103ed4eed702d89e85de291a33 182 ProSitePatterns PS00893 Nudix box signature. 78 99 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XFUD_11820 cf95be876ab138992da3c2e1bdd3f783 1023 Pfam PF04851 Type III restriction enzyme, res subunit 295 493 4.7E-12 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XFUD_11820 cf95be876ab138992da3c2e1bdd3f783 1023 SMART SM00487 290 517 1.0E-11 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_11820 cf95be876ab138992da3c2e1bdd3f783 1023 SUPERFAMILY SSF52540 277 499 2.2E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11820 cf95be876ab138992da3c2e1bdd3f783 1023 Gene3D G3DSA:3.40.50.300 293 453 4.7E-24 T 11-10-2018 XFUD_11820 cf95be876ab138992da3c2e1bdd3f783 1023 Gene3D G3DSA:3.90.1570.50 119 278 3.9E-8 T 11-10-2018 XFUD_11820 cf95be876ab138992da3c2e1bdd3f783 1023 Gene3D G3DSA:3.40.50.300 633 746 2.3E-20 T 11-10-2018 XFUD_11820 cf95be876ab138992da3c2e1bdd3f783 1023 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 135 223 3.3E-15 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 XFUD_11820 cf95be876ab138992da3c2e1bdd3f783 1023 SUPERFAMILY SSF52540 315 748 7.77E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05205 7637ee69fe6203723e1ece29e0fee838 833 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 6 830 0.0 T 11-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 XFUD_05205 7637ee69fe6203723e1ece29e0fee838 833 SMART SM00847 385 481 4.4E-11 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 XFUD_05205 7637ee69fe6203723e1ece29e0fee838 833 Pfam PF08482 ATP-dependent helicase C-terminal 682 819 4.2E-50 T 11-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal XFUD_05205 7637ee69fe6203723e1ece29e0fee838 833 Pfam PF04408 Helicase associated domain (HA2) 386 450 9.7E-16 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 XFUD_05205 7637ee69fe6203723e1ece29e0fee838 833 SMART SM00487 4 190 4.4E-13 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_05205 7637ee69fe6203723e1ece29e0fee838 833 SMART SM00490 232 330 5.3E-16 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_05205 7637ee69fe6203723e1ece29e0fee838 833 PIRSF PIRSF005496 1 833 0.0 T 11-10-2018 XFUD_05205 7637ee69fe6203723e1ece29e0fee838 833 Gene3D G3DSA:3.40.50.300 1 181 5.8E-52 T 11-10-2018 XFUD_05205 7637ee69fe6203723e1ece29e0fee838 833 Gene3D G3DSA:1.20.120.1080 369 457 1.8E-9 T 11-10-2018 XFUD_05205 7637ee69fe6203723e1ece29e0fee838 833 SUPERFAMILY SSF52540 18 341 2.79E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05205 7637ee69fe6203723e1ece29e0fee838 833 Pfam PF00271 Helicase conserved C-terminal domain 210 329 2.8E-16 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_05205 7637ee69fe6203723e1ece29e0fee838 833 Gene3D G3DSA:3.40.50.300 182 347 1.9E-51 T 11-10-2018 XFUD_00100 1a4092e7b17fe706f8dc8db22382f556 364 PIRSF PIRSF001361 3 351 1.5E-156 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 XFUD_00100 1a4092e7b17fe706f8dc8db22382f556 364 Gene3D G3DSA:3.20.20.70 3 350 1.2E-158 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_00100 1a4092e7b17fe706f8dc8db22382f556 364 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 348 1.3E-158 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 XFUD_00100 1a4092e7b17fe706f8dc8db22382f556 364 Pfam PF00793 DAHP synthetase I family 41 338 7.6E-97 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XFUD_00100 1a4092e7b17fe706f8dc8db22382f556 364 SUPERFAMILY SSF51569 7 348 4.08E-134 T 11-10-2018 XFUD_01955 b806b18a272fb2109700b2624d0f9333 170 Pfam PF12019 Type II transport protein GspH 44 160 6.7E-17 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 XFUD_01955 b806b18a272fb2109700b2624d0f9333 170 Gene3D G3DSA:3.30.700.10 8 169 7.4E-15 T 11-10-2018 XFUD_01955 b806b18a272fb2109700b2624d0f9333 170 SUPERFAMILY SSF54523 8 145 4.39E-20 T 11-10-2018 XFUD_01955 b806b18a272fb2109700b2624d0f9333 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 2.1E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_01955 b806b18a272fb2109700b2624d0f9333 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 28 2.5E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_04430 7080ef41896aee6327ba68b018310b56 160 Gene3D G3DSA:3.10.129.10 8 159 9.0E-54 T 11-10-2018 XFUD_04430 7080ef41896aee6327ba68b018310b56 160 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 16 159 33.419 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFUD_04430 7080ef41896aee6327ba68b018310b56 160 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 16 156 6.7E-63 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFUD_04430 7080ef41896aee6327ba68b018310b56 160 SUPERFAMILY SSF54637 15 156 6.43E-44 T 11-10-2018 IPR029069 HotDog domain superfamily XFUD_04430 7080ef41896aee6327ba68b018310b56 160 Pfam PF07977 FabA-like domain 25 150 1.6E-39 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFUD_10485 b61956c04adcea69e910a6fe5949e6e3 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 2.8E-27 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_10485 b61956c04adcea69e910a6fe5949e6e3 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.986 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_10485 b61956c04adcea69e910a6fe5949e6e3 89 Gene3D G3DSA:1.20.58.110 1 87 2.4E-27 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_10485 b61956c04adcea69e910a6fe5949e6e3 89 Pfam PF01649 Ribosomal protein S20 2 84 4.5E-26 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_10485 b61956c04adcea69e910a6fe5949e6e3 89 SUPERFAMILY SSF46992 3 86 8.76E-30 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_10485 b61956c04adcea69e910a6fe5949e6e3 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 89 3.0E-37 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 5.5E-14 T 11-10-2018 XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 5.5E-14 T 11-10-2018 XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 5.5E-14 T 11-10-2018 XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.2E-6 T 11-10-2018 XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.2E-6 T 11-10-2018 XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 SUPERFAMILY SSF52317 1 192 5.58E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 Pfam PF00117 Glutamine amidotransferase class-I 4 190 8.1E-53 T 11-10-2018 IPR017926 Glutamine amidotransferase XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.5E-36 T 11-10-2018 XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.5E-36 T 11-10-2018 XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.5E-36 T 11-10-2018 XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.5E-36 T 11-10-2018 XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.5E-36 T 11-10-2018 XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.5E-36 T 11-10-2018 XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 1.9E-79 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_00890 2dee3d36a8e46a5e807e0d5fa6ae301e 194 Gene3D G3DSA:3.40.50.880 1 192 4.4E-62 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like XFUD_08295 6e6aac05634db143be3b4f893267b969 224 Pfam PF00425 chorismate binding enzyme 1 203 1.3E-65 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal XFUD_08295 6e6aac05634db143be3b4f893267b969 224 Gene3D G3DSA:3.60.120.10 1 217 8.3E-83 T 11-10-2018 IPR005801 ADC synthase GO:0009058 XFUD_08295 6e6aac05634db143be3b4f893267b969 224 PRINTS PR00095 Anthranilate synthase component I signature 64 77 4.6E-15 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_08295 6e6aac05634db143be3b4f893267b969 224 PRINTS PR00095 Anthranilate synthase component I signature 144 158 4.6E-15 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_08295 6e6aac05634db143be3b4f893267b969 224 PRINTS PR00095 Anthranilate synthase component I signature 160 174 4.6E-15 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_08295 6e6aac05634db143be3b4f893267b969 224 PRINTS PR00095 Anthranilate synthase component I signature 50 63 4.6E-15 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 XFUD_08295 6e6aac05634db143be3b4f893267b969 224 SUPERFAMILY SSF56322 1 211 6.02E-78 T 11-10-2018 IPR005801 ADC synthase GO:0009058 XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 SUPERFAMILY SSF52490 15 210 1.57E-68 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 357 37.387 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 174 3.1E-39 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 ProSitePatterns PS01135 FtsZ protein signature 2. 99 120 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 PRINTS PR00423 Cell division protein FtsZ signature 191 213 4.1E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 PRINTS PR00423 Cell division protein FtsZ signature 214 235 4.1E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 PRINTS PR00423 Cell division protein FtsZ signature 100 120 4.1E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 PRINTS PR00423 Cell division protein FtsZ signature 128 149 4.1E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 SMART SM00864 15 207 1.2E-110 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 Pfam PF12327 FtsZ family, C-terminal domain 224 318 1.4E-37 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 333 3.3E-129 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 SMART SM00865 209 327 2.7E-53 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 SUPERFAMILY SSF55307 206 320 2.98E-42 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 Gene3D G3DSA:3.40.50.1440 5 222 6.5E-80 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 XFUD_03420 3a83dbc1326ff7938f52a9acdfd3e6e7 411 Gene3D G3DSA:3.30.1330.20 223 335 1.0E-34 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 XFUD_01565 6f15ec86c7da225f179f1f35939822be 222 Pfam PF04350 Pilus assembly protein, PilO 54 201 1.6E-50 T 11-10-2018 IPR007445 Pilus assembly protein, PilO XFUD_01565 6f15ec86c7da225f179f1f35939822be 222 Gene3D G3DSA:3.30.70.60 96 211 5.8E-34 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 XFUD_01565 6f15ec86c7da225f179f1f35939822be 222 PIRSF PIRSF016482 1 219 1.0E-103 T 11-10-2018 IPR007445 Pilus assembly protein, PilO XFUD_05840 5753a9e608d023d40b4fc1649fe23f65 202 SUPERFAMILY SSF81452 12 200 5.1E-57 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05840 5753a9e608d023d40b4fc1649fe23f65 202 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 23 202 2.3E-82 T 11-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 XFUD_05840 5753a9e608d023d40b4fc1649fe23f65 202 Gene3D G3DSA:1.20.120.80 17 202 2.1E-58 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05840 5753a9e608d023d40b4fc1649fe23f65 202 Pfam PF00510 Cytochrome c oxidase subunit III 23 200 3.6E-13 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05475 bf5020387c424e3609a3f4df18328efc 194 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 16 190 3.4E-32 T 11-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like XFUD_05475 bf5020387c424e3609a3f4df18328efc 194 SUPERFAMILY SSF51197 6 192 3.57E-59 T 11-10-2018 XFUD_05475 bf5020387c424e3609a3f4df18328efc 194 Gene3D G3DSA:2.60.120.590 8 194 6.9E-59 T 11-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily XFUD_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 SUPERFAMILY SSF53067 57 173 1.46E-9 T 11-10-2018 XFUD_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 SUPERFAMILY SSF53067 190 350 2.96E-21 T 11-10-2018 XFUD_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 Gene3D G3DSA:3.30.420.40 12 349 4.9E-83 T 11-10-2018 XFUD_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 Pfam PF11104 Type IV pilus assembly protein PilM; 13 351 1.3E-129 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM XFUD_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 7 351 6.3E-151 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM XFUD_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 Gene3D G3DSA:3.30.420.40 188 315 4.9E-83 T 11-10-2018 XFUD_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 Gene3D G3DSA:3.30.1490.300 87 146 4.9E-83 T 11-10-2018 XFUD_01555 9fb8ff1b52207c8812eb19c7b39b63d5 352 PIRSF PIRSF019169 1 352 6.9E-128 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM XFUD_09030 13b3c20881ee2452475cf1dd230277f3 133 Gene3D G3DSA:2.40.10.10 15 129 1.6E-14 T 11-10-2018 XFUD_09030 13b3c20881ee2452475cf1dd230277f3 133 SUPERFAMILY SSF50494 20 129 9.54E-6 T 11-10-2018 IPR009003 Peptidase S1, PA clan XFUD_03645 84623a2e3c6713d28426cf559b706767 340 SUPERFAMILY SSF53474 42 333 1.85E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_03645 84623a2e3c6713d28426cf559b706767 340 Gene3D G3DSA:3.40.50.1820 38 336 3.6E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_03645 84623a2e3c6713d28426cf559b706767 340 Pfam PF00561 alpha/beta hydrolase fold 60 321 8.8E-16 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFUD_03645 84623a2e3c6713d28426cf559b706767 340 PIRSF PIRSF000443 38 340 1.7E-62 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 XFUD_08645 7f70041436c6594c2ab7b01b8154c87b 409 Pfam PF04932 O-Antigen ligase 177 332 3.1E-14 T 11-10-2018 IPR007016 O-antigen ligase-related XFUD_06995 b0f4efb8ca3a2b54e89b0a4c348ddf25 273 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 2 269 2.2E-81 T 11-10-2018 IPR019276 Protein of unkown function DUF2303 XFUD_03385 d4d0e40c3e10c5c4a1fb6153432e876e 361 Pfam PF00953 Glycosyl transferase family 4 99 285 2.4E-34 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 XFUD_03385 d4d0e40c3e10c5c4a1fb6153432e876e 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 24.52 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_03385 d4d0e40c3e10c5c4a1fb6153432e876e 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_03385 d4d0e40c3e10c5c4a1fb6153432e876e 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 1.4E-129 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_03385 d4d0e40c3e10c5c4a1fb6153432e876e 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_05730 53602859e21a08bc160506398a6ac01c 416 PIRSF PIRSF000813 1 408 5.1E-181 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 XFUD_05730 53602859e21a08bc160506398a6ac01c 416 Gene3D G3DSA:3.30.460.10 1 122 2.9E-30 T 11-10-2018 XFUD_05730 53602859e21a08bc160506398a6ac01c 416 SUPERFAMILY SSF81891 121 404 6.54E-53 T 11-10-2018 XFUD_05730 53602859e21a08bc160506398a6ac01c 416 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 409 48.811 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 XFUD_05730 53602859e21a08bc160506398a6ac01c 416 Pfam PF01966 HD domain 238 348 1.6E-4 T 11-10-2018 IPR006674 HD domain XFUD_05730 53602859e21a08bc160506398a6ac01c 416 SUPERFAMILY SSF81301 2 120 1.42E-29 T 11-10-2018 XFUD_05730 53602859e21a08bc160506398a6ac01c 416 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 213 6.0E-12 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XFUD_05730 53602859e21a08bc160506398a6ac01c 416 Gene3D G3DSA:1.10.3090.10 123 407 7.1E-43 T 11-10-2018 XFUD_05730 53602859e21a08bc160506398a6ac01c 416 Pfam PF01743 Poly A polymerase head domain 4 123 1.2E-20 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 646 0.0 T 11-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 503 2.2E-136 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 Gene3D G3DSA:1.20.210.10 30 564 4.2E-189 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 382 400 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 215 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 460 481 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 165 177 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 368 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 119 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 410 429 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 338 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 123 147 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 226 245 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 277 298 1.8E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 279 333 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05845 68422c911dd8dbe94664bfde7202900a 665 SUPERFAMILY SSF81442 42 557 6.28E-177 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_02540 2e1218fdd82980dcf6d0d5970523acca 346 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 332 3.8E-133 T 11-10-2018 IPR016040 NAD(P)-binding domain XFUD_02540 2e1218fdd82980dcf6d0d5970523acca 346 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 338 1.0E-140 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 XFUD_02540 2e1218fdd82980dcf6d0d5970523acca 346 Gene3D G3DSA:3.40.50.720 6 323 9.8E-143 T 11-10-2018 XFUD_02540 2e1218fdd82980dcf6d0d5970523acca 346 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 342 51.858 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 XFUD_02540 2e1218fdd82980dcf6d0d5970523acca 346 SUPERFAMILY SSF51735 4 335 1.56E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_02540 2e1218fdd82980dcf6d0d5970523acca 346 Gene3D G3DSA:3.90.25.10 189 337 9.8E-143 T 11-10-2018 XFUD_03065 7a404b6004445859c8bc5c7b8bf89294 185 Pfam PF09684 Phage tail protein (Tail_P2_I) 9 150 8.4E-46 T 11-10-2018 IPR006521 Tail protein I XFUD_03065 7a404b6004445859c8bc5c7b8bf89294 185 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 9 147 7.3E-70 T 11-10-2018 IPR006521 Tail protein I XFUD_10800 7a404b6004445859c8bc5c7b8bf89294 185 Pfam PF09684 Phage tail protein (Tail_P2_I) 9 150 8.4E-46 T 11-10-2018 IPR006521 Tail protein I XFUD_10800 7a404b6004445859c8bc5c7b8bf89294 185 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 9 147 7.3E-70 T 11-10-2018 IPR006521 Tail protein I XFUD_10460 07f4e64909ba7c16d1ed9ecc64528033 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 37.808 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 XFUD_10460 07f4e64909ba7c16d1ed9ecc64528033 316 Gene3D G3DSA:3.40.50.11270 12 96 2.7E-109 T 11-10-2018 XFUD_10460 07f4e64909ba7c16d1ed9ecc64528033 316 Gene3D G3DSA:3.40.1010.20 97 198 2.7E-109 T 11-10-2018 XFUD_10460 07f4e64909ba7c16d1ed9ecc64528033 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 3.4E-98 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 XFUD_10460 07f4e64909ba7c16d1ed9ecc64528033 316 Gene3D G3DSA:3.40.1010.20 6 283 2.7E-109 T 11-10-2018 XFUD_10460 07f4e64909ba7c16d1ed9ecc64528033 316 Pfam PF02401 LytB protein 3 284 1.2E-90 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 XFUD_02405 58a9e0768ac0f471360a74b1116fa476 172 Pfam PF07977 FabA-like domain 28 158 2.0E-50 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFUD_02405 58a9e0768ac0f471360a74b1116fa476 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 172 1.8E-85 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFUD_02405 58a9e0768ac0f471360a74b1116fa476 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 172 49.356 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFUD_02405 58a9e0768ac0f471360a74b1116fa476 172 Gene3D G3DSA:3.10.129.10 1 172 7.0E-60 T 11-10-2018 XFUD_02405 58a9e0768ac0f471360a74b1116fa476 172 SUPERFAMILY SSF54637 2 169 1.91E-52 T 11-10-2018 IPR029069 HotDog domain superfamily XFUD_03970 c4aabc0b1f4f350feb7e4fa11e2fb433 384 SMART SM00257 32 80 2.6E-8 T 11-10-2018 IPR018392 LysM domain XFUD_03970 c4aabc0b1f4f350feb7e4fa11e2fb433 384 Gene3D G3DSA:3.10.350.10 31 78 2.3E-15 T 11-10-2018 IPR036779 LysM domain superfamily XFUD_03970 c4aabc0b1f4f350feb7e4fa11e2fb433 384 Pfam PF01476 LysM domain 33 78 3.7E-13 T 11-10-2018 IPR018392 LysM domain XFUD_03970 c4aabc0b1f4f350feb7e4fa11e2fb433 384 SUPERFAMILY SSF54106 31 79 2.22E-7 T 11-10-2018 XFUD_08335 3ac16ff6b3340def7dbfe618241037c8 323 Pfam PF02445 Quinolinate synthetase A protein 32 322 6.8E-113 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 XFUD_08335 3ac16ff6b3340def7dbfe618241037c8 323 Gene3D G3DSA:3.40.50.10800 32 304 9.7E-112 T 11-10-2018 XFUD_08335 3ac16ff6b3340def7dbfe618241037c8 323 Hamap MF_00568 Quinolinate synthase A [nadA]. 27 323 43.677 T 11-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 XFUD_08335 3ac16ff6b3340def7dbfe618241037c8 323 Gene3D G3DSA:3.40.50.10800 112 321 9.7E-112 T 11-10-2018 XFUD_08335 3ac16ff6b3340def7dbfe618241037c8 323 Gene3D G3DSA:3.40.50.10800 195 279 9.7E-112 T 11-10-2018 XFUD_08335 3ac16ff6b3340def7dbfe618241037c8 323 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 30 323 2.2E-97 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 XFUD_08335 3ac16ff6b3340def7dbfe618241037c8 323 SUPERFAMILY SSF142754 30 322 3.66E-110 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 XFUD_05160 fa0d7b757a3006870e4d10130e96f6cc 161 Pfam PF09900 Predicted membrane protein (DUF2127) 15 149 3.7E-35 T 11-10-2018 IPR021125 Protein of unknown function DUF2127 XFUD_08450 e62e52e236540324b13d54d79dfa7650 485 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 462 2.9E-161 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 XFUD_08450 e62e52e236540324b13d54d79dfa7650 485 SUPERFAMILY SSF56235 2 255 4.72E-65 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFUD_08450 e62e52e236540324b13d54d79dfa7650 485 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 462 44.87 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 XFUD_08450 e62e52e236540324b13d54d79dfa7650 485 PIRSF PIRSF000485 1 476 2.7E-155 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 XFUD_08450 e62e52e236540324b13d54d79dfa7650 485 Gene3D G3DSA:3.40.50.2020 273 442 2.0E-145 T 11-10-2018 XFUD_08450 e62e52e236540324b13d54d79dfa7650 485 Pfam PF13522 Glutamine amidotransferase domain 57 206 4.5E-15 T 11-10-2018 XFUD_08450 e62e52e236540324b13d54d79dfa7650 485 SUPERFAMILY SSF53271 248 471 5.25E-70 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like XFUD_08450 e62e52e236540324b13d54d79dfa7650 485 Gene3D G3DSA:3.60.20.10 2 463 2.0E-145 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFUD_06370 e8a6a7914b8e936cbdff2576102623c5 831 Pfam PF07793 Protein of unknown function (DUF1631) 18 816 1.7E-211 T 11-10-2018 IPR012434 Protein of unknown function DUF1631 XFUD_08715 8b6226c33c5941a8ba10303da9eb42a6 73 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 9 73 2.4E-32 T 11-10-2018 IPR012662 Conserved hypothetical protein CHP02449 XFUD_00965 167f3ba4688118e8531511465c361643 165 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 9 138 1.7E-33 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFUD_00965 167f3ba4688118e8531511465c361643 165 Gene3D G3DSA:3.30.70.560 6 162 3.3E-50 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFUD_00965 167f3ba4688118e8531511465c361643 165 SUPERFAMILY SSF55083 7 153 6.67E-49 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFUD_00965 167f3ba4688118e8531511465c361643 165 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 8 138 2.3E-45 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFUD_00965 167f3ba4688118e8531511465c361643 165 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 94 105 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 XFUD_08160 4353ae668de57dfbb27545ec7b8738bd 716 Pfam PF10459 Peptidase S46 22 713 2.1E-262 T 11-10-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 XFUD_08160 4353ae668de57dfbb27545ec7b8738bd 716 SUPERFAMILY SSF50494 29 700 4.5E-24 T 11-10-2018 IPR009003 Peptidase S1, PA clan XFUD_08160 4353ae668de57dfbb27545ec7b8738bd 716 Gene3D G3DSA:2.40.10.10 629 691 7.4E-6 T 11-10-2018 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 Pfam PF01341 Glycosyl hydrolases family 6 43 395 1.6E-98 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 SUPERFAMILY SSF49384 598 683 8.37E-20 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 SMART SM00637 602 682 2.6E-20 T 11-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 Gene3D G3DSA:2.60.40.290 597 683 3.8E-18 T 11-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 Gene3D G3DSA:3.20.20.40 20 443 3.3E-156 T 11-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 349 369 1.2E-33 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 104 117 1.2E-33 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 205 218 1.2E-33 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 50 69 1.2E-33 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 245 255 1.2E-33 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 138 153 1.2E-33 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 309 322 1.2E-33 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 PRINTS PR00733 Glycosyl hydrolase family 6 signature 372 386 1.2E-33 T 11-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 SUPERFAMILY SSF51989 21 443 3.14E-115 T 11-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 XFUD_05360 626283a41ea05d9ee3eba8c9e59669be 683 Pfam PF00553 Cellulose binding domain 605 682 7.5E-15 T 11-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 XFUD_04820 b86581f37ee781a9bf7ae833b1cf1ce0 457 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 6 453 39.424 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 XFUD_04820 b86581f37ee781a9bf7ae833b1cf1ce0 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 2.5E-7 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_04820 b86581f37ee781a9bf7ae833b1cf1ce0 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 397 430 8.3E-6 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_04820 b86581f37ee781a9bf7ae833b1cf1ce0 457 Gene3D G3DSA:3.90.550.10 6 228 1.8E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_04820 b86581f37ee781a9bf7ae833b1cf1ce0 457 SUPERFAMILY SSF51161 256 439 2.03E-44 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFUD_04820 b86581f37ee781a9bf7ae833b1cf1ce0 457 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 8 456 4.2E-192 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 XFUD_04820 b86581f37ee781a9bf7ae833b1cf1ce0 457 Pfam PF12804 MobA-like NTP transferase domain 10 135 6.4E-24 T 11-10-2018 IPR025877 MobA-like NTP transferase XFUD_04820 b86581f37ee781a9bf7ae833b1cf1ce0 457 Gene3D G3DSA:2.160.10.10 230 457 1.9E-59 T 11-10-2018 XFUD_04820 b86581f37ee781a9bf7ae833b1cf1ce0 457 SUPERFAMILY SSF53448 7 249 2.17E-56 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_11470 549c4033f92763a10e0188371d2f200b 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 1.6E-17 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11470 549c4033f92763a10e0188371d2f200b 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 95 2.0E-12 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11470 549c4033f92763a10e0188371d2f200b 122 SUPERFAMILY SSF48300 4 59 1.44E-16 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11470 549c4033f92763a10e0188371d2f200b 122 SUPERFAMILY SSF54736 52 122 3.49E-22 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XFUD_11470 549c4033f92763a10e0188371d2f200b 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 122 8.4E-25 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11470 549c4033f92763a10e0188371d2f200b 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 2.3E-41 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11470 549c4033f92763a10e0188371d2f200b 122 Gene3D G3DSA:3.30.1390.10 53 122 2.5E-26 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XFUD_11470 549c4033f92763a10e0188371d2f200b 122 Gene3D G3DSA:1.20.5.710 2 52 6.7E-20 T 11-10-2018 XFUD_11470 549c4033f92763a10e0188371d2f200b 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 23.786 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_11640 f03d4f7258f213e23af160588ae08e0b 328 PIRSF PIRSF028415 1 327 3.8E-201 T 11-10-2018 IPR014545 Uncharacterised conserved protein UCP028415 XFUD_11640 f03d4f7258f213e23af160588ae08e0b 328 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 96 305 1.3E-103 T 11-10-2018 IPR019262 Domain of unknown function DUF2272 XFUD_11765 7fbf44a272d810b10ffa6f809686b062 494 SUPERFAMILY SSF46548 6 158 3.03E-37 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XFUD_11765 7fbf44a272d810b10ffa6f809686b062 494 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 7 483 1.0E-253 T 11-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 XFUD_11765 7fbf44a272d810b10ffa6f809686b062 494 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 471 6.2E-26 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 XFUD_11765 7fbf44a272d810b10ffa6f809686b062 494 Gene3D G3DSA:1.10.1060.10 20 145 5.3E-33 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 XFUD_11765 7fbf44a272d810b10ffa6f809686b062 494 SUPERFAMILY SSF51971 146 410 9.42E-65 T 11-10-2018 XFUD_11765 7fbf44a272d810b10ffa6f809686b062 494 Gene3D G3DSA:3.50.50.60 257 409 1.4E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_11765 7fbf44a272d810b10ffa6f809686b062 494 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 29 135 8.8E-37 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 XFUD_11765 7fbf44a272d810b10ffa6f809686b062 494 PRINTS PR00419 Adrenodoxin reductase family signature 172 185 1.6E-29 T 11-10-2018 XFUD_11765 7fbf44a272d810b10ffa6f809686b062 494 PRINTS PR00419 Adrenodoxin reductase family signature 299 313 1.6E-29 T 11-10-2018 XFUD_11765 7fbf44a272d810b10ffa6f809686b062 494 PRINTS PR00419 Adrenodoxin reductase family signature 149 171 1.6E-29 T 11-10-2018 XFUD_11765 7fbf44a272d810b10ffa6f809686b062 494 PRINTS PR00419 Adrenodoxin reductase family signature 333 346 1.6E-29 T 11-10-2018 XFUD_11765 7fbf44a272d810b10ffa6f809686b062 494 Gene3D G3DSA:3.40.50.720 146 256 4.9E-19 T 11-10-2018 XFUD_09900 d8616ebdb2037c9819afaf7a02350b93 102 SMART SM01259 21 94 8.6E-23 T 11-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XFUD_09900 d8616ebdb2037c9819afaf7a02350b93 102 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 21 92 6.8E-21 T 11-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XFUD_09900 d8616ebdb2037c9819afaf7a02350b93 102 PIRSF PIRSF028440 1 102 2.6E-40 T 11-10-2018 IPR014546 Uncharacterised conserved protein, lipid A biosynthesis XFUD_09900 d8616ebdb2037c9819afaf7a02350b93 102 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 16 99 9.0E-43 T 11-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XFUD_03700 20e513578e5561032c0b2b4d80864d9e 370 Pfam PF13439 Glycosyltransferase Family 4 13 161 2.3E-18 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XFUD_03700 20e513578e5561032c0b2b4d80864d9e 370 Gene3D G3DSA:3.40.50.2000 171 342 8.0E-34 T 11-10-2018 XFUD_03700 20e513578e5561032c0b2b4d80864d9e 370 Gene3D G3DSA:3.40.50.2000 1 170 2.0E-15 T 11-10-2018 XFUD_03700 20e513578e5561032c0b2b4d80864d9e 370 SUPERFAMILY SSF53756 3 361 9.42E-71 T 11-10-2018 XFUD_03700 20e513578e5561032c0b2b4d80864d9e 370 Pfam PF13692 Glycosyl transferases group 1 185 320 6.2E-21 T 11-10-2018 XFUD_09395 ab561f63dc1d50c7bd4960a71f8de393 204 Pfam PF01161 Phosphatidylethanolamine-binding protein 27 196 3.3E-34 T 11-10-2018 IPR008914 Phosphatidylethanolamine-binding protein XFUD_09395 ab561f63dc1d50c7bd4960a71f8de393 204 SUPERFAMILY SSF49777 1 199 3.92E-39 T 11-10-2018 IPR036610 PEBP-like superfamily XFUD_09395 ab561f63dc1d50c7bd4960a71f8de393 204 Gene3D G3DSA:3.90.280.10 1 198 3.1E-44 T 11-10-2018 IPR036610 PEBP-like superfamily XFUD_09395 ab561f63dc1d50c7bd4960a71f8de393 204 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 28 196 7.5E-23 T 11-10-2018 IPR005247 YbhB/YbcL XFUD_01640 920324617f21dcabb64a2179e70a4915 482 SMART SM00387 369 482 3.6E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_01640 920324617f21dcabb64a2179e70a4915 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 480 1.6E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_01640 920324617f21dcabb64a2179e70a4915 482 Gene3D G3DSA:3.30.565.10 334 480 3.5E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_01640 920324617f21dcabb64a2179e70a4915 482 Gene3D G3DSA:1.10.287.130 219 324 5.2E-11 T 11-10-2018 XFUD_01640 920324617f21dcabb64a2179e70a4915 482 SUPERFAMILY SSF55874 318 479 2.23E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_01640 920324617f21dcabb64a2179e70a4915 482 SUPERFAMILY SSF47384 250 315 4.32E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFUD_01640 920324617f21dcabb64a2179e70a4915 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 2.0E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_01640 920324617f21dcabb64a2179e70a4915 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 2.0E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_01640 920324617f21dcabb64a2179e70a4915 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 2.0E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_03685 b387abda80fd239ee1681cdc74336323 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 235 6.8E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFUD_03685 b387abda80fd239ee1681cdc74336323 235 SUPERFAMILY SSF161098 25 220 1.27E-41 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_03685 b387abda80fd239ee1681cdc74336323 235 Gene3D G3DSA:1.10.3720.10 24 234 2.6E-45 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_01335 fd29aab327c64a32101ea7056827b613 435 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 61 72 - T 11-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01335 fd29aab327c64a32101ea7056827b613 435 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 15 435 48.31 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01335 fd29aab327c64a32101ea7056827b613 435 SUPERFAMILY SSF56762 34 435 9.94E-132 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01335 fd29aab327c64a32101ea7056827b613 435 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 138 435 1.8E-118 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01335 fd29aab327c64a32101ea7056827b613 435 Gene3D G3DSA:1.10.645.20 22 435 3.2E-167 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01335 fd29aab327c64a32101ea7056827b613 435 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 24 435 1.3E-180 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_03130 c120e1debfc929b54d1dc8d0533e9f51 65 Pfam PF01632 Ribosomal protein L35 2 62 2.4E-24 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_03130 c120e1debfc929b54d1dc8d0533e9f51 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.2E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XFUD_03130 c120e1debfc929b54d1dc8d0533e9f51 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.2E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XFUD_03130 c120e1debfc929b54d1dc8d0533e9f51 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.2E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XFUD_03130 c120e1debfc929b54d1dc8d0533e9f51 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 4.4E-26 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XFUD_03130 c120e1debfc929b54d1dc8d0533e9f51 65 Gene3D G3DSA:2.40.50.530 1 64 9.9E-22 T 11-10-2018 XFUD_03130 c120e1debfc929b54d1dc8d0533e9f51 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_03130 c120e1debfc929b54d1dc8d0533e9f51 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.905 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 XFUD_03130 c120e1debfc929b54d1dc8d0533e9f51 65 SUPERFAMILY SSF143034 2 64 1.07E-22 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_07160 9a120f96cdca243c7f6ac4c1d828dc2b 93 Gene3D G3DSA:1.10.260.40 11 93 3.7E-25 T 11-10-2018 XFUD_07160 9a120f96cdca243c7f6ac4c1d828dc2b 93 Pfam PF13744 Helix-turn-helix domain 14 89 7.2E-24 T 11-10-2018 IPR039554 HigA2-like, helix-turn-helix domain XFUD_07160 9a120f96cdca243c7f6ac4c1d828dc2b 93 SUPERFAMILY SSF47413 19 89 1.13E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_06665 9a120f96cdca243c7f6ac4c1d828dc2b 93 Gene3D G3DSA:1.10.260.40 11 93 3.7E-25 T 11-10-2018 XFUD_06665 9a120f96cdca243c7f6ac4c1d828dc2b 93 Pfam PF13744 Helix-turn-helix domain 14 89 7.2E-24 T 11-10-2018 IPR039554 HigA2-like, helix-turn-helix domain XFUD_06665 9a120f96cdca243c7f6ac4c1d828dc2b 93 SUPERFAMILY SSF47413 19 89 1.13E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_07945 3151faf6370ee0cf18f43464e8034477 154 SUPERFAMILY SSF52833 1 122 3.55E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_07945 3151faf6370ee0cf18f43464e8034477 154 Gene3D G3DSA:3.40.30.10 16 148 4.7E-38 T 11-10-2018 XFUD_07945 3151faf6370ee0cf18f43464e8034477 154 Pfam PF13899 Thioredoxin-like 30 114 5.2E-15 T 11-10-2018 XFUD_01090 3b00ebc3b24466137d3665dc0ce9d7e1 249 SMART SM00893 23 211 7.8E-53 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 XFUD_01090 3b00ebc3b24466137d3665dc0ce9d7e1 249 PIRSF PIRSF000090 1 249 8.8E-80 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 XFUD_01090 3b00ebc3b24466137d3665dc0ce9d7e1 249 SUPERFAMILY SSF52402 1 242 1.12E-74 T 11-10-2018 XFUD_01090 3b00ebc3b24466137d3665dc0ce9d7e1 249 Pfam PF01012 Electron transfer flavoprotein domain 26 206 4.1E-38 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 XFUD_01090 3b00ebc3b24466137d3665dc0ce9d7e1 249 Gene3D G3DSA:3.40.50.620 1 248 7.8E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold XFUD_09435 03ba363765a44fa3c919117daf0e1397 137 SUPERFAMILY SSF81301 23 127 1.96E-38 T 11-10-2018 XFUD_09435 03ba363765a44fa3c919117daf0e1397 137 Gene3D G3DSA:3.30.460.10 20 134 1.9E-37 T 11-10-2018 XFUD_09435 03ba363765a44fa3c919117daf0e1397 137 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 23 120 8.7E-37 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS XFUD_09435 03ba363765a44fa3c919117daf0e1397 137 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 121 24.847 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS XFUD_09435 03ba363765a44fa3c919117daf0e1397 137 Pfam PF02410 Ribosomal silencing factor during starvation 26 120 5.8E-28 T 11-10-2018 XFUD_01265 b7e8a098a39e48152f3f9ee706a41a3f 352 Pfam PF04851 Type III restriction enzyme, res subunit 252 338 5.9E-12 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 XFUD_01265 b7e8a098a39e48152f3f9ee706a41a3f 352 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 13 197 5.2E-23 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 XFUD_01265 b7e8a098a39e48152f3f9ee706a41a3f 352 SUPERFAMILY SSF52540 221 332 6.86E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01265 b7e8a098a39e48152f3f9ee706a41a3f 352 Gene3D G3DSA:3.90.1570.50 92 246 5.6E-16 T 11-10-2018 XFUD_01265 b7e8a098a39e48152f3f9ee706a41a3f 352 Gene3D G3DSA:3.40.50.300 252 352 7.7E-17 T 11-10-2018 XFUD_07365 3f6cca59ecf654bf99b537de12e9c052 217 Gene3D G3DSA:3.40.190.10 12 200 5.4E-23 T 11-10-2018 XFUD_07365 3f6cca59ecf654bf99b537de12e9c052 217 SUPERFAMILY SSF53850 8 209 7.78E-26 T 11-10-2018 XFUD_07365 3f6cca59ecf654bf99b537de12e9c052 217 Gene3D G3DSA:3.40.190.10 81 183 5.4E-23 T 11-10-2018 XFUD_07365 3f6cca59ecf654bf99b537de12e9c052 217 Pfam PF03466 LysR substrate binding domain 6 202 6.5E-27 T 11-10-2018 IPR005119 LysR, substrate-binding XFUD_11690 08ed5aaa57e171b985aa23469ac08b8e 733 SUPERFAMILY SSF52540 408 613 1.6E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11690 08ed5aaa57e171b985aa23469ac08b8e 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 2.6E-171 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 XFUD_11690 08ed5aaa57e171b985aa23469ac08b8e 733 Gene3D G3DSA:1.10.8.630 4 114 2.7E-29 T 11-10-2018 XFUD_11690 08ed5aaa57e171b985aa23469ac08b8e 733 SMART SM00487 196 392 1.1E-17 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_11690 08ed5aaa57e171b985aa23469ac08b8e 733 Gene3D G3DSA:3.40.50.300 189 379 1.6E-71 T 11-10-2018 XFUD_11690 08ed5aaa57e171b985aa23469ac08b8e 733 Pfam PF00271 Helicase conserved C-terminal domain 507 593 1.6E-5 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_11690 08ed5aaa57e171b985aa23469ac08b8e 733 Pfam PF00270 DEAD/DEAH box helicase 204 362 1.7E-12 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 XFUD_11690 08ed5aaa57e171b985aa23469ac08b8e 733 SMART SM00490 497 593 2.4E-9 T 11-10-2018 IPR001650 Helicase, C-terminal XFUD_11690 08ed5aaa57e171b985aa23469ac08b8e 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 23.112 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 XFUD_11690 08ed5aaa57e171b985aa23469ac08b8e 733 SUPERFAMILY SSF52540 184 380 3.91E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01385 5b26237404d9d9b89ed029564a34f121 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 1.3E-8 T 11-10-2018 XFUD_01385 5b26237404d9d9b89ed029564a34f121 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 1.3E-8 T 11-10-2018 XFUD_01385 5b26237404d9d9b89ed029564a34f121 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 416 435 1.3E-8 T 11-10-2018 XFUD_01385 5b26237404d9d9b89ed029564a34f121 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 1.3E-8 T 11-10-2018 XFUD_01385 5b26237404d9d9b89ed029564a34f121 485 Pfam PF00361 Proton-conducting membrane transporter 129 422 2.7E-79 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01385 5b26237404d9d9b89ed029564a34f121 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 14 473 3.1E-141 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 XFUD_01385 5b26237404d9d9b89ed029564a34f121 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 11 474 18.086 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 XFUD_00375 c771c8d1f194a93094ee4e8072a6a42a 298 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 22 276 1.1E-94 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 XFUD_00375 c771c8d1f194a93094ee4e8072a6a42a 298 Gene3D G3DSA:3.20.20.20 1 284 1.1E-107 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XFUD_00375 c771c8d1f194a93094ee4e8072a6a42a 298 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 56 69 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XFUD_00375 c771c8d1f194a93094ee4e8072a6a42a 298 SUPERFAMILY SSF51717 10 278 3.53E-98 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XFUD_00375 c771c8d1f194a93094ee4e8072a6a42a 298 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XFUD_00375 c771c8d1f194a93094ee4e8072a6a42a 298 Pfam PF00809 Pterin binding enzyme 23 262 6.1E-79 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 XFUD_08190 8be2c2fb608be9f7e1d54df2484e046e 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 136 1.8E-26 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XFUD_08190 8be2c2fb608be9f7e1d54df2484e046e 249 Gene3D G3DSA:3.40.50.1240 2 249 1.4E-81 T 11-10-2018 IPR029033 Histidine phosphatase superfamily XFUD_08190 8be2c2fb608be9f7e1d54df2484e046e 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 XFUD_08190 8be2c2fb608be9f7e1d54df2484e046e 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 229 43.881 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 XFUD_08190 8be2c2fb608be9f7e1d54df2484e046e 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 247 9.3E-126 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 XFUD_08190 8be2c2fb608be9f7e1d54df2484e046e 249 SMART SM00855 4 190 3.4E-23 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 XFUD_08190 8be2c2fb608be9f7e1d54df2484e046e 249 SUPERFAMILY SSF53254 1 246 4.12E-74 T 11-10-2018 IPR029033 Histidine phosphatase superfamily XFUD_08190 8be2c2fb608be9f7e1d54df2484e046e 249 PIRSF PIRSF000709 1 112 6.9E-7 T 11-10-2018 XFUD_08190 8be2c2fb608be9f7e1d54df2484e046e 249 PIRSF PIRSF000709 172 243 0.017 T 11-10-2018 XFUD_04400 12676205353db7c24d4c4390768fefaa 1008 Pfam PF00593 TonB dependent receptor 362 1006 7.3E-15 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFUD_04400 12676205353db7c24d4c4390768fefaa 1008 SUPERFAMILY SSF49452 32 106 4.71E-7 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 XFUD_04400 12676205353db7c24d4c4390768fefaa 1008 SUPERFAMILY SSF56935 115 1008 2.2E-56 T 11-10-2018 XFUD_06850 a4a814c06e9590cdc058dbb07e681436 473 Gene3D G3DSA:3.50.80.20 84 188 3.6E-19 T 11-10-2018 XFUD_06850 a4a814c06e9590cdc058dbb07e681436 473 SUPERFAMILY SSF56601 30 463 4.11E-82 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFUD_06850 a4a814c06e9590cdc058dbb07e681436 473 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 49 450 2.6E-94 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFUD_06850 a4a814c06e9590cdc058dbb07e681436 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 7.5E-23 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFUD_06850 a4a814c06e9590cdc058dbb07e681436 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 7.5E-23 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFUD_06850 a4a814c06e9590cdc058dbb07e681436 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 427 440 7.5E-23 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFUD_06850 a4a814c06e9590cdc058dbb07e681436 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 288 310 7.5E-23 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFUD_06850 a4a814c06e9590cdc058dbb07e681436 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 60 79 7.5E-23 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFUD_06850 a4a814c06e9590cdc058dbb07e681436 473 Gene3D G3DSA:3.40.710.10 213 468 1.1E-50 T 11-10-2018 XFUD_06850 a4a814c06e9590cdc058dbb07e681436 473 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 20 458 4.3E-102 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFUD_01570 00c99d10fd378ed9245e2bf5de9d365e 176 Pfam PF04351 Pilus assembly protein, PilP 34 173 4.2E-47 T 11-10-2018 IPR007446 Pilus assembly protein PilP XFUD_01570 00c99d10fd378ed9245e2bf5de9d365e 176 PIRSF PIRSF016481 3 176 6.8E-74 T 11-10-2018 IPR007446 Pilus assembly protein PilP XFUD_01570 00c99d10fd378ed9245e2bf5de9d365e 176 Gene3D G3DSA:2.30.30.830 82 174 1.0E-30 T 11-10-2018 XFUD_02725 6725d48292105beb891c2d48e30efe82 285 SUPERFAMILY SSF54001 157 284 6.62E-40 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XFUD_02725 6725d48292105beb891c2d48e30efe82 285 Pfam PF00877 NlpC/P60 family 175 283 4.6E-29 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain XFUD_02725 6725d48292105beb891c2d48e30efe82 285 Gene3D G3DSA:3.90.1720.10 159 285 4.2E-39 T 11-10-2018 XFUD_02680 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 104 124 6.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFUD_02680 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 334 352 6.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFUD_02680 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 67 81 6.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFUD_02680 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 357 377 6.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFUD_02680 a70393d465e974c15dd138990a1f6193 380 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 315 332 6.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 XFUD_02680 a70393d465e974c15dd138990a1f6193 380 Pfam PF01555 DNA methylase 68 374 1.9E-44 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 XFUD_02680 a70393d465e974c15dd138990a1f6193 380 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 72 77 - T 11-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 XFUD_02680 a70393d465e974c15dd138990a1f6193 380 SUPERFAMILY SSF53335 49 375 1.62E-58 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_06820 e63b13566a10468ddebc14ddb9681836 450 PIRSF PIRSF500134 1 447 2.0E-186 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 XFUD_06820 e63b13566a10468ddebc14ddb9681836 450 SMART SM00984 325 429 3.3E-49 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFUD_06820 e63b13566a10468ddebc14ddb9681836 450 SUPERFAMILY SSF48179 204 301 5.27E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XFUD_06820 e63b13566a10468ddebc14ddb9681836 450 SUPERFAMILY SSF52413 319 440 2.62E-38 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 XFUD_06820 e63b13566a10468ddebc14ddb9681836 450 Gene3D G3DSA:3.40.50.720 235 450 1.4E-75 T 11-10-2018 XFUD_06820 e63b13566a10468ddebc14ddb9681836 450 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 425 7.7E-137 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XFUD_06820 e63b13566a10468ddebc14ddb9681836 450 Gene3D G3DSA:1.20.5.100 203 233 5.1E-18 T 11-10-2018 XFUD_06820 e63b13566a10468ddebc14ddb9681836 450 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 429 4.7E-31 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFUD_06820 e63b13566a10468ddebc14ddb9681836 450 Gene3D G3DSA:3.40.50.720 1 202 1.1E-78 T 11-10-2018 XFUD_06820 e63b13566a10468ddebc14ddb9681836 450 PIRSF PIRSF000124 1 444 1.6E-150 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 XFUD_06820 e63b13566a10468ddebc14ddb9681836 450 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 5.1E-38 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFUD_06820 e63b13566a10468ddebc14ddb9681836 450 SUPERFAMILY SSF51735 1 195 2.63E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_06820 e63b13566a10468ddebc14ddb9681836 450 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 1.9E-68 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 XFUD_05575 d1a98119aee9b44ff0642c2aabae5c49 192 Pfam PF00583 Acetyltransferase (GNAT) family 20 128 7.1E-6 T 11-10-2018 IPR000182 GNAT domain XFUD_05575 d1a98119aee9b44ff0642c2aabae5c49 192 PIRSF PIRSF028520 1 164 8.4E-82 T 11-10-2018 IPR016890 Uncharacterised conserved protein UCP028520 XFUD_05575 d1a98119aee9b44ff0642c2aabae5c49 192 SUPERFAMILY SSF55729 1 147 1.06E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFUD_05575 d1a98119aee9b44ff0642c2aabae5c49 192 Gene3D G3DSA:3.40.630.30 2 164 1.0E-14 T 11-10-2018 XFUD_10155 54039d6cce00ef4917ae14ca48a2ec7e 373 Pfam PF02153 Prephenate dehydrogenase 46 251 2.4E-25 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 XFUD_10155 54039d6cce00ef4917ae14ca48a2ec7e 373 SUPERFAMILY SSF48179 154 254 7.03E-18 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 XFUD_10155 54039d6cce00ef4917ae14ca48a2ec7e 373 Gene3D G3DSA:1.10.3660.10 161 275 3.8E-12 T 11-10-2018 XFUD_10155 54039d6cce00ef4917ae14ca48a2ec7e 373 Gene3D G3DSA:3.40.50.720 2 159 4.0E-29 T 11-10-2018 XFUD_10155 54039d6cce00ef4917ae14ca48a2ec7e 373 Gene3D G3DSA:3.30.70.260 296 365 3.8E-8 T 11-10-2018 XFUD_10155 54039d6cce00ef4917ae14ca48a2ec7e 373 SUPERFAMILY SSF51735 7 151 1.97E-23 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_10155 54039d6cce00ef4917ae14ca48a2ec7e 373 SUPERFAMILY SSF55021 296 360 1.66E-8 T 11-10-2018 XFUD_02460 e5fe51ff33082728f835ea81b0aa0fa5 233 Gene3D G3DSA:3.40.50.300 2 160 1.1E-24 T 11-10-2018 XFUD_02460 e5fe51ff33082728f835ea81b0aa0fa5 233 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 229 1.6E-71 T 11-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 XFUD_02460 e5fe51ff33082728f835ea81b0aa0fa5 233 Gene3D G3DSA:1.10.8.60 164 229 6.6E-23 T 11-10-2018 XFUD_02460 e5fe51ff33082728f835ea81b0aa0fa5 233 SMART SM00382 40 163 1.7E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_02460 e5fe51ff33082728f835ea81b0aa0fa5 233 SUPERFAMILY SSF52540 21 209 6.53E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_02460 e5fe51ff33082728f835ea81b0aa0fa5 233 Pfam PF01695 IstB-like ATP binding protein 28 87 1.2E-6 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 XFUD_08205 fe3142b722205612d1ee01f00640b87d 178 Gene3D G3DSA:3.30.1330.60 60 177 8.9E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily XFUD_08205 fe3142b722205612d1ee01f00640b87d 178 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 3 175 28.562 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 XFUD_08205 fe3142b722205612d1ee01f00640b87d 178 SUPERFAMILY SSF103088 56 174 1.57E-32 T 11-10-2018 IPR036737 OmpA-like domain superfamily XFUD_08205 fe3142b722205612d1ee01f00640b87d 178 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 73 175 1.9E-42 T 11-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 XFUD_08205 fe3142b722205612d1ee01f00640b87d 178 Pfam PF00691 OmpA family 74 169 1.3E-16 T 11-10-2018 IPR006665 OmpA-like domain XFUD_08205 fe3142b722205612d1ee01f00640b87d 178 PRINTS PR01021 OMPA domain signature 105 120 8.7E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFUD_08205 fe3142b722205612d1ee01f00640b87d 178 PRINTS PR01021 OMPA domain signature 75 97 8.7E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFUD_08205 fe3142b722205612d1ee01f00640b87d 178 PRINTS PR01021 OMPA domain signature 120 136 8.7E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 XFUD_03450 c7a53b9c3ef77447b88e633c37162fdb 282 Gene3D G3DSA:3.40.50.150 121 276 2.9E-14 T 11-10-2018 XFUD_03450 c7a53b9c3ef77447b88e633c37162fdb 282 SUPERFAMILY SSF53335 69 269 2.33E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_07540 f6bac9fa2253cbbcfae61db2cddde782 72 Pfam PF12553 Protein of unknown function (DUF3742) 1 45 1.3E-16 T 11-10-2018 IPR022213 Protein of unknown function DUF3742 XFUD_03255 38b48de22938dfec766da8e9b3dfb64d 326 SUPERFAMILY SSF55298 225 323 1.63E-5 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XFUD_03255 38b48de22938dfec766da8e9b3dfb64d 326 Gene3D G3DSA:3.30.1330.40 207 325 1.2E-10 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 XFUD_03355 380eabecb1a45a4730b8dfd756cdf6ca 148 Pfam PF02381 MraZ protein, putative antitoxin-like 85 133 2.4E-11 T 11-10-2018 IPR020603 MraZ domain XFUD_03355 380eabecb1a45a4730b8dfd756cdf6ca 148 Pfam PF02381 MraZ protein, putative antitoxin-like 2 72 1.8E-8 T 11-10-2018 IPR020603 MraZ domain XFUD_03355 380eabecb1a45a4730b8dfd756cdf6ca 148 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 148 38.546 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 XFUD_03355 380eabecb1a45a4730b8dfd756cdf6ca 148 Gene3D G3DSA:2.40.330.20 1 141 2.8E-31 T 11-10-2018 IPR038619 MraZ superfamily XFUD_03355 380eabecb1a45a4730b8dfd756cdf6ca 148 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 125 2.0E-68 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 XFUD_03355 380eabecb1a45a4730b8dfd756cdf6ca 148 SUPERFAMILY SSF89447 2 136 6.38E-33 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily XFUD_11885 30e3d998ff300075367ff5ca125aa847 1144 Pfam PF13558 Putative exonuclease SbcCD, C subunit 993 1083 5.8E-22 T 11-10-2018 XFUD_11885 30e3d998ff300075367ff5ca125aa847 1144 Gene3D G3DSA:3.40.1140.10 18 206 2.5E-6 T 11-10-2018 XFUD_11885 30e3d998ff300075367ff5ca125aa847 1144 Pfam PF13555 P-loop containing region of AAA domain 22 82 2.2E-23 T 11-10-2018 XFUD_11885 30e3d998ff300075367ff5ca125aa847 1144 SUPERFAMILY SSF52540 21 1093 4.04E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_02575 d0a9b693b4654c4923966ca881821332 547 Gene3D G3DSA:3.50.7.10 192 372 1.1E-236 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily XFUD_02575 d0a9b693b4654c4923966ca881821332 547 SUPERFAMILY SSF52029 184 376 5.41E-83 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily XFUD_02575 d0a9b693b4654c4923966ca881821332 547 PRINTS PR00298 60kDa chaperonin signature 27 53 1.3E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFUD_02575 d0a9b693b4654c4923966ca881821332 547 PRINTS PR00298 60kDa chaperonin signature 83 110 1.3E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFUD_02575 d0a9b693b4654c4923966ca881821332 547 PRINTS PR00298 60kDa chaperonin signature 350 375 1.3E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFUD_02575 d0a9b693b4654c4923966ca881821332 547 PRINTS PR00298 60kDa chaperonin signature 268 291 1.3E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFUD_02575 d0a9b693b4654c4923966ca881821332 547 PRINTS PR00298 60kDa chaperonin signature 398 419 1.3E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFUD_02575 d0a9b693b4654c4923966ca881821332 547 SUPERFAMILY SSF48592 7 521 2.42E-77 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily XFUD_02575 d0a9b693b4654c4923966ca881821332 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.8E-253 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFUD_02575 d0a9b693b4654c4923966ca881821332 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 545 40.872 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFUD_02575 d0a9b693b4654c4923966ca881821332 547 Gene3D G3DSA:3.30.260.10 136 410 1.1E-236 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily XFUD_02575 d0a9b693b4654c4923966ca881821332 547 SUPERFAMILY SSF54849 137 204 1.79E-25 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily XFUD_02575 d0a9b693b4654c4923966ca881821332 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 XFUD_02575 d0a9b693b4654c4923966ca881821332 547 Gene3D G3DSA:1.10.560.10 8 521 1.1E-236 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily XFUD_02575 d0a9b693b4654c4923966ca881821332 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 4.7E-96 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 XFUD_09750 2f1b920515bfa470ed8781ec0fa25807 958 SUPERFAMILY SSF56935 43 958 6.41E-82 T 11-10-2018 XFUD_09750 2f1b920515bfa470ed8781ec0fa25807 958 Gene3D G3DSA:2.170.130.10 39 170 1.0E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFUD_09750 2f1b920515bfa470ed8781ec0fa25807 958 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 166 5.8E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFUD_09750 2f1b920515bfa470ed8781ec0fa25807 958 Pfam PF00593 TonB dependent receptor 397 956 3.6E-35 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFUD_05140 6a45561d39bd65d599171aacf1ffab84 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 70 9.5E-10 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 XFUD_05140 6a45561d39bd65d599171aacf1ffab84 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 124 193 6.6E-9 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal XFUD_05140 6a45561d39bd65d599171aacf1ffab84 205 Gene3D G3DSA:3.40.30.10 2 201 2.6E-77 T 11-10-2018 XFUD_05140 6a45561d39bd65d599171aacf1ffab84 205 Gene3D G3DSA:1.20.1050.10 80 192 2.6E-77 T 11-10-2018 XFUD_05140 6a45561d39bd65d599171aacf1ffab84 205 SUPERFAMILY SSF47616 82 203 3.69E-24 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily XFUD_05140 6a45561d39bd65d599171aacf1ffab84 205 SUPERFAMILY SSF52833 1 76 1.05E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_05810 989dd334fa2cd44b58465fcc54bc189b 180 ProSitePatterns PS00818 Dps protein family signature 1. 59 75 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 XFUD_05810 989dd334fa2cd44b58465fcc54bc189b 180 Pfam PF00210 Ferritin-like domain 40 180 2.1E-28 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 XFUD_05810 989dd334fa2cd44b58465fcc54bc189b 180 ProSitePatterns PS00819 Dps protein family signature 2. 85 99 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 XFUD_05810 989dd334fa2cd44b58465fcc54bc189b 180 PIRSF PIRSF005900 16 180 1.1E-46 T 11-10-2018 IPR002177 DNA-binding protein Dps XFUD_05810 989dd334fa2cd44b58465fcc54bc189b 180 SUPERFAMILY SSF47240 22 180 1.45E-46 T 11-10-2018 IPR009078 Ferritin-like superfamily XFUD_05810 989dd334fa2cd44b58465fcc54bc189b 180 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 59 75 1.9E-12 T 11-10-2018 IPR002177 DNA-binding protein Dps XFUD_05810 989dd334fa2cd44b58465fcc54bc189b 180 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 83 99 1.9E-12 T 11-10-2018 IPR002177 DNA-binding protein Dps XFUD_05810 989dd334fa2cd44b58465fcc54bc189b 180 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 157 175 1.9E-12 T 11-10-2018 IPR002177 DNA-binding protein Dps XFUD_05810 989dd334fa2cd44b58465fcc54bc189b 180 Gene3D G3DSA:1.20.1260.10 2 180 8.0E-57 T 11-10-2018 IPR012347 Ferritin-like XFUD_03935 50e4f7a320d4382ab3b65af770369c1b 103 Gene3D G3DSA:2.160.10.10 2 100 2.8E-10 T 11-10-2018 XFUD_03935 50e4f7a320d4382ab3b65af770369c1b 103 SUPERFAMILY SSF51161 19 87 4.71E-11 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFUD_06345 7c9da21960f9f68cd596e04b0621bd9a 204 SUPERFAMILY SSF52540 2 188 8.46E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_06345 7c9da21960f9f68cd596e04b0621bd9a 204 Gene3D G3DSA:3.40.50.300 7 180 1.5E-63 T 11-10-2018 XFUD_06345 7c9da21960f9f68cd596e04b0621bd9a 204 Gene3D G3DSA:3.30.63.10 34 93 1.5E-63 T 11-10-2018 XFUD_06345 7c9da21960f9f68cd596e04b0621bd9a 204 SMART SM00072 2 184 2.9E-59 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit XFUD_06345 7c9da21960f9f68cd596e04b0621bd9a 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 9.0E-72 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 XFUD_06345 7c9da21960f9f68cd596e04b0621bd9a 204 Pfam PF00625 Guanylate kinase 4 181 1.4E-46 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit XFUD_06345 7c9da21960f9f68cd596e04b0621bd9a 204 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 35.158 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 XFUD_06345 7c9da21960f9f68cd596e04b0621bd9a 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 XFUD_00430 56d2f5d13cdf3e9110ccf3eccbebadde 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 10 305 1.6E-116 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 XFUD_00430 56d2f5d13cdf3e9110ccf3eccbebadde 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 11 296 7.3E-67 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XFUD_00430 56d2f5d13cdf3e9110ccf3eccbebadde 306 PIRSF PIRSF026649 5 305 1.1E-86 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XFUD_00430 56d2f5d13cdf3e9110ccf3eccbebadde 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 305 41.268 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 XFUD_03910 ba68e3ddcea54d1dad67a7857e368240 144 SUPERFAMILY SSF101738 5 120 4.58E-46 T 11-10-2018 IPR036760 SspB-like superfamily XFUD_03910 ba68e3ddcea54d1dad67a7857e368240 144 Pfam PF04386 Stringent starvation protein B 10 144 1.5E-32 T 11-10-2018 IPR007481 Stringent starvation protein B XFUD_03910 ba68e3ddcea54d1dad67a7857e368240 144 PIRSF PIRSF005276 4 144 3.9E-54 T 11-10-2018 IPR007481 Stringent starvation protein B XFUD_03910 ba68e3ddcea54d1dad67a7857e368240 144 Gene3D G3DSA:2.30.30.220 4 129 7.1E-44 T 11-10-2018 IPR036760 SspB-like superfamily XFUD_03515 048f013f30ff1dc46c677f4fd3dbcd12 319 Gene3D G3DSA:3.40.50.1100 37 155 2.5E-112 T 11-10-2018 XFUD_03515 048f013f30ff1dc46c677f4fd3dbcd12 319 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 303 2.1E-136 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 XFUD_03515 048f013f30ff1dc46c677f4fd3dbcd12 319 SUPERFAMILY SSF53686 1 305 1.83E-92 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XFUD_03515 048f013f30ff1dc46c677f4fd3dbcd12 319 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 XFUD_03515 048f013f30ff1dc46c677f4fd3dbcd12 319 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 303 3.7E-127 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 XFUD_03515 048f013f30ff1dc46c677f4fd3dbcd12 319 Gene3D G3DSA:3.40.50.1100 7 300 2.5E-112 T 11-10-2018 XFUD_03515 048f013f30ff1dc46c677f4fd3dbcd12 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 291 3.5E-62 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XFUD_00865 221b0e6e0072ee000b4c954003d4bfef 1193 SMART SM00481 7 88 4.0E-14 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal XFUD_00865 221b0e6e0072ee000b4c954003d4bfef 1193 Gene3D G3DSA:1.10.10.1600 443 527 4.5E-29 T 11-10-2018 XFUD_00865 221b0e6e0072ee000b4c954003d4bfef 1193 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1057 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_00865 221b0e6e0072ee000b4c954003d4bfef 1193 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 304 748 4.9E-169 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_00865 221b0e6e0072ee000b4c954003d4bfef 1193 Gene3D G3DSA:3.20.20.140 1 281 6.7E-78 T 11-10-2018 XFUD_00865 221b0e6e0072ee000b4c954003d4bfef 1193 SUPERFAMILY SSF89550 6 272 7.85E-11 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 XFUD_00865 221b0e6e0072ee000b4c954003d4bfef 1193 Pfam PF01336 OB-fold nucleic acid binding domain 1026 1094 5.2E-8 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 XFUD_00865 221b0e6e0072ee000b4c954003d4bfef 1193 Pfam PF14579 Helix-hairpin-helix motif 824 912 2.8E-25 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_00865 221b0e6e0072ee000b4c954003d4bfef 1193 SUPERFAMILY SSF50249 1020 1085 7.71E-5 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_00865 221b0e6e0072ee000b4c954003d4bfef 1193 Pfam PF02811 PHP domain 8 184 2.7E-24 T 11-10-2018 IPR004013 PHP domain GO:0003824 XFUD_08710 5b6ad4cce3494bf89dd64debf1ef5983 181 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 21 160 3.7E-10 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 XFUD_08710 5b6ad4cce3494bf89dd64debf1ef5983 181 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 2 180 31.02 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 XFUD_08710 5b6ad4cce3494bf89dd64debf1ef5983 181 Gene3D G3DSA:1.20.120.740 1 174 7.2E-47 T 11-10-2018 XFUD_08710 5b6ad4cce3494bf89dd64debf1ef5983 181 Pfam PF03695 Uncharacterised protein family (UPF0149) 10 168 5.0E-30 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 XFUD_08710 5b6ad4cce3494bf89dd64debf1ef5983 181 SUPERFAMILY SSF101327 5 169 2.75E-39 T 11-10-2018 IPR036255 YgfB-like superfamily XFUD_05390 18ddd1ae39eae9288ff54f90718ecbb0 168 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 31 148 8.7E-50 T 11-10-2018 IPR008769 Poly granule associated XFUD_05390 18ddd1ae39eae9288ff54f90718ecbb0 168 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 23 146 2.6E-39 T 11-10-2018 IPR008769 Poly granule associated XFUD_03625 eca066ceea34f02a352b5a9747ddd0d2 204 Pfam PF09335 SNARE associated Golgi protein 40 163 8.3E-9 T 11-10-2018 IPR032816 SNARE associated Golgi protein XFUD_11145 f8584ddd9c515ac6b50ed65738ed9b1b 354 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 17 341 2.1E-139 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XFUD_11145 f8584ddd9c515ac6b50ed65738ed9b1b 354 Pfam PF01008 Initiation factor 2 subunit family 57 341 7.5E-76 T 11-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 XFUD_11145 f8584ddd9c515ac6b50ed65738ed9b1b 354 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 42 341 2.3E-112 T 11-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XFUD_11145 f8584ddd9c515ac6b50ed65738ed9b1b 354 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 352 38.513 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XFUD_11145 f8584ddd9c515ac6b50ed65738ed9b1b 354 Gene3D G3DSA:3.40.50.10470 159 351 1.7E-64 T 11-10-2018 XFUD_11145 f8584ddd9c515ac6b50ed65738ed9b1b 354 Gene3D G3DSA:1.20.120.420 14 153 3.5E-40 T 11-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 XFUD_11145 f8584ddd9c515ac6b50ed65738ed9b1b 354 SUPERFAMILY SSF100950 11 345 1.67E-111 T 11-10-2018 IPR037171 NagB/RpiA transferase-like XFUD_06360 da3a652501163abe950856fefed7a2ac 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 194 4.5E-52 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 XFUD_06360 da3a652501163abe950856fefed7a2ac 199 Gene3D G3DSA:3.90.950.10 1 197 3.0E-71 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XFUD_06360 da3a652501163abe950856fefed7a2ac 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 47.44 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 XFUD_06360 da3a652501163abe950856fefed7a2ac 199 Pfam PF01725 Ham1 family 4 192 8.5E-52 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 XFUD_06360 da3a652501163abe950856fefed7a2ac 199 SUPERFAMILY SSF52972 1 195 7.85E-70 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XFUD_09465 40eda9058c9de2b26e0143e7d46801eb 202 Pfam PF01694 Rhomboid family 36 184 1.7E-28 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 XFUD_09465 40eda9058c9de2b26e0143e7d46801eb 202 Gene3D G3DSA:1.20.1540.10 1 191 2.3E-27 T 11-10-2018 IPR035952 Rhomboid-like superfamily XFUD_09465 40eda9058c9de2b26e0143e7d46801eb 202 SUPERFAMILY SSF144091 2 185 1.2E-34 T 11-10-2018 XFUD_06510 fc0ad968df5f009c83f1fa03ef114152 217 Gene3D G3DSA:1.20.1260.10 62 199 1.6E-5 T 11-10-2018 IPR012347 Ferritin-like XFUD_06510 fc0ad968df5f009c83f1fa03ef114152 217 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 17 217 29.036 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 XFUD_06510 fc0ad968df5f009c83f1fa03ef114152 217 SUPERFAMILY SSF47240 55 190 5.42E-17 T 11-10-2018 IPR009078 Ferritin-like superfamily XFUD_06510 fc0ad968df5f009c83f1fa03ef114152 217 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 57 214 6.7E-37 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 XFUD_07870 db78e307f4d82c96f9e3faedbfe8cba4 324 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 1.6E-35 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XFUD_07870 db78e307f4d82c96f9e3faedbfe8cba4 324 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 324 71.89 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XFUD_07870 db78e307f4d82c96f9e3faedbfe8cba4 324 Gene3D G3DSA:3.40.47.10 2 324 1.9E-131 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_07870 db78e307f4d82c96f9e3faedbfe8cba4 324 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 323 1.7E-136 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XFUD_07870 db78e307f4d82c96f9e3faedbfe8cba4 324 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 187 3.7E-34 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 XFUD_07870 db78e307f4d82c96f9e3faedbfe8cba4 324 SUPERFAMILY SSF53901 7 324 3.61E-70 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 XFUD_03140 de495a04d2185f6733e8fd9dd79bbe94 331 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 330 2.0E-101 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 XFUD_03140 de495a04d2185f6733e8fd9dd79bbe94 331 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 87 1.8E-20 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 XFUD_03140 de495a04d2185f6733e8fd9dd79bbe94 331 SUPERFAMILY SSF55681 92 330 6.17E-81 T 11-10-2018 XFUD_03140 de495a04d2185f6733e8fd9dd79bbe94 331 SUPERFAMILY SSF46589 12 99 4.97E-19 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 XFUD_03140 de495a04d2185f6733e8fd9dd79bbe94 331 Gene3D G3DSA:3.30.930.10 7 331 9.4E-116 T 11-10-2018 XFUD_03140 de495a04d2185f6733e8fd9dd79bbe94 331 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 330 48.907 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 XFUD_03140 de495a04d2185f6733e8fd9dd79bbe94 331 Pfam PF01409 tRNA synthetases class II core domain (F) 92 330 1.4E-104 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 XFUD_03595 f0762e7869bea692a07ac9d61908e36e 155 Pfam PF01641 SelR domain 20 136 2.8E-46 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 XFUD_03595 f0762e7869bea692a07ac9d61908e36e 155 SUPERFAMILY SSF51316 15 140 3.84E-52 T 11-10-2018 IPR011057 Mss4-like superfamily XFUD_03595 f0762e7869bea692a07ac9d61908e36e 155 Gene3D G3DSA:2.170.150.20 11 154 5.1E-56 T 11-10-2018 XFUD_03595 f0762e7869bea692a07ac9d61908e36e 155 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 16 137 8.3E-48 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 XFUD_03595 f0762e7869bea692a07ac9d61908e36e 155 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 11 137 35.364 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 XFUD_02085 12d52fd4266e379fdd3bcf10da9afa8b 143 Gene3D G3DSA:1.10.260.40 9 59 1.3E-5 T 11-10-2018 XFUD_02085 12d52fd4266e379fdd3bcf10da9afa8b 143 SUPERFAMILY SSF47413 5 57 3.22E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_05100 cba1fca540f64f165905fb9f0f3e94c5 108 SUPERFAMILY SSF52833 3 107 1.32E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_05100 cba1fca540f64f165905fb9f0f3e94c5 108 Pfam PF00085 Thioredoxin 6 105 3.2E-12 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 XFUD_05100 cba1fca540f64f165905fb9f0f3e94c5 108 Gene3D G3DSA:3.40.30.10 1 108 4.7E-16 T 11-10-2018 XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 Gene3D G3DSA:1.25.40.10 5 316 2.2E-48 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 SUPERFAMILY SSF52540 550 672 8.18E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 202 235 15.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 271 304 270.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 134 167 17.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 168 201 0.002 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 237 270 100.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 32 65 89.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 66 99 64.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 SMART SM00028 100 133 340.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 Gene3D G3DSA:1.25.40.10 319 452 9.2E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 SUPERFAMILY SSF48452 237 434 4.17E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 SUPERFAMILY SSF48452 18 338 2.8E-34 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 Pfam PF13432 Tetratricopeptide repeat 208 271 3.2E-6 T 11-10-2018 XFUD_09390 41a454f5ba3c8a5cfc094221a56cf0fb 690 Pfam PF13432 Tetratricopeptide repeat 141 199 7.6E-7 T 11-10-2018 XFUD_06700 5c35aae2ca6cf9caf505c7ee14d14239 124 Pfam PF13262 Protein of unknown function (DUF4054) 10 114 1.4E-27 T 11-10-2018 IPR025127 Protein of unknown function DUF4054 XFUD_07195 5c35aae2ca6cf9caf505c7ee14d14239 124 Pfam PF13262 Protein of unknown function (DUF4054) 10 114 1.4E-27 T 11-10-2018 IPR025127 Protein of unknown function DUF4054 XFUD_06890 ed411d6e84406a3f0fe59a2dabf71556 341 Pfam PF06580 Histidine kinase 153 231 7.8E-21 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 XFUD_06890 ed411d6e84406a3f0fe59a2dabf71556 341 SUPERFAMILY SSF55874 208 291 9.68E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_11890 b7c8e3e7ed430069ea80bb8c58e8a455 401 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 211 389 8.9E-63 T 11-10-2018 IPR024534 Domain of unknown function DUF2220 XFUD_11890 b7c8e3e7ed430069ea80bb8c58e8a455 401 Pfam PF11795 Uncharacterized protein conserved in bacteria N-term (DUF3322) 6 188 1.5E-59 T 11-10-2018 IPR024537 Domain of unknown function DUF3322 XFUD_11890 b7c8e3e7ed430069ea80bb8c58e8a455 401 PIRSF PIRSF028408 1 399 3.6E-143 T 11-10-2018 IPR014544 Uncharacterised conserved protein UCP028408 XFUD_10240 4344d39e391cd6604089ac993fc647ec 443 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 271 438 3.5E-20 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 XFUD_10240 4344d39e391cd6604089ac993fc647ec 443 Gene3D G3DSA:3.40.50.150 87 437 1.6E-97 T 11-10-2018 XFUD_10240 4344d39e391cd6604089ac993fc647ec 443 Gene3D G3DSA:3.40.1350.30 133 274 1.6E-97 T 11-10-2018 XFUD_10240 4344d39e391cd6604089ac993fc647ec 443 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 373 403 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site XFUD_10240 4344d39e391cd6604089ac993fc647ec 443 Gene3D G3DSA:2.40.50.140 1 85 2.0E-23 T 11-10-2018 XFUD_10240 4344d39e391cd6604089ac993fc647ec 443 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 425 435 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site XFUD_10240 4344d39e391cd6604089ac993fc647ec 443 SUPERFAMILY SSF50249 12 72 5.6E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_10240 4344d39e391cd6604089ac993fc647ec 443 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 19 435 6.9E-92 T 11-10-2018 XFUD_10240 4344d39e391cd6604089ac993fc647ec 443 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 13 443 63.067 T 11-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 XFUD_10240 4344d39e391cd6604089ac993fc647ec 443 SUPERFAMILY SSF53335 74 441 2.08E-75 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_01455 a277f1cc83343004def6510fd541da40 69 Pfam PF07120 Protein of unknown function (DUF1376) 14 57 1.1E-7 T 11-10-2018 IPR010781 Protein of unknown function DUF1376 XFUD_11285 abf81a54678e17b8fc0844f5692b70f9 218 Gene3D G3DSA:3.40.50.150 3 209 5.3E-40 T 11-10-2018 XFUD_11285 abf81a54678e17b8fc0844f5692b70f9 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 174 2.2E-26 T 11-10-2018 XFUD_11285 abf81a54678e17b8fc0844f5692b70f9 218 SUPERFAMILY SSF53335 4 185 4.96E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_05185 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 Gene3D G3DSA:3.40.50.300 2 238 5.4E-61 T 11-10-2018 XFUD_05185 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 Pfam PF00005 ABC transporter 27 171 1.6E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_05185 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 SMART SM00382 36 218 9.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_05185 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 SUPERFAMILY SSF52540 6 238 3.59E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05185 6e4aa9a214d8531cbfdd9bb2e6c2c3f0 310 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_06180 91a091bb6e16ebf3844c5909e465d57e 298 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 286 4.4E-127 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_06180 91a091bb6e16ebf3844c5909e465d57e 298 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 284 37.841 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_06180 91a091bb6e16ebf3844c5909e465d57e 298 Gene3D G3DSA:3.90.226.10 28 289 2.2E-83 T 11-10-2018 XFUD_06180 91a091bb6e16ebf3844c5909e465d57e 298 SUPERFAMILY SSF52096 28 287 2.98E-84 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFUD_06180 91a091bb6e16ebf3844c5909e465d57e 298 Pfam PF01039 Carboxyl transferase domain 126 243 5.9E-15 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 XFUD_06180 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 254 263 3.8E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_06180 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 132 146 3.8E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_06180 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 166 184 3.8E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_06180 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 203 220 3.8E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_06180 91a091bb6e16ebf3844c5909e465d57e 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 232 243 3.8E-41 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 XFUD_08025 6b211d22caf463742a687af53d5e09ea 536 Gene3D G3DSA:3.30.750.44 49 129 1.7E-6 T 11-10-2018 XFUD_08025 6b211d22caf463742a687af53d5e09ea 536 Gene3D G3DSA:3.30.750.44 470 484 3.0E-30 T 11-10-2018 XFUD_08025 6b211d22caf463742a687af53d5e09ea 536 SUPERFAMILY SSF52096 272 527 1.99E-47 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily XFUD_08025 6b211d22caf463742a687af53d5e09ea 536 Gene3D G3DSA:3.90.226.10 333 506 3.0E-30 T 11-10-2018 XFUD_08025 6b211d22caf463742a687af53d5e09ea 536 SMART SM00245 321 509 1.7E-8 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XFUD_08025 6b211d22caf463742a687af53d5e09ea 536 Pfam PF03572 Peptidase family S41 354 507 3.0E-20 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 XFUD_08025 6b211d22caf463742a687af53d5e09ea 536 Gene3D G3DSA:2.30.42.10 130 169 1.7E-6 T 11-10-2018 XFUD_08025 6b211d22caf463742a687af53d5e09ea 536 Gene3D G3DSA:2.30.42.10 265 332 3.0E-30 T 11-10-2018 XFUD_08025 6b211d22caf463742a687af53d5e09ea 536 Pfam PF14684 Tricorn protease C1 domain 47 105 8.0E-9 T 11-10-2018 IPR028204 Tricorn protease C1 domain XFUD_03060 6a962e3e8352e30346ad98476303881c 297 Pfam PF04865 Baseplate J-like protein 113 254 9.4E-25 T 11-10-2018 IPR006949 Baseplate protein J-like XFUD_03060 6a962e3e8352e30346ad98476303881c 297 PIRSF PIRSF020481 5 297 3.0E-118 T 11-10-2018 IPR014507 Baseplate assembly protein J, predicted XFUD_10805 6a962e3e8352e30346ad98476303881c 297 Pfam PF04865 Baseplate J-like protein 113 254 9.4E-25 T 11-10-2018 IPR006949 Baseplate protein J-like XFUD_10805 6a962e3e8352e30346ad98476303881c 297 PIRSF PIRSF020481 5 297 3.0E-118 T 11-10-2018 IPR014507 Baseplate assembly protein J, predicted XFUD_00645 e463638adb26f4014e3cc8e062ac0425 219 SUPERFAMILY SSF53271 2 202 1.85E-43 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like XFUD_00645 e463638adb26f4014e3cc8e062ac0425 219 Gene3D G3DSA:3.40.50.2020 1 219 1.0E-66 T 11-10-2018 XFUD_00645 e463638adb26f4014e3cc8e062ac0425 219 Pfam PF00156 Phosphoribosyl transferase domain 46 158 5.1E-15 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 XFUD_00645 e463638adb26f4014e3cc8e062ac0425 219 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 219 29.4 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_00645 e463638adb26f4014e3cc8e062ac0425 219 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 189 1.8E-53 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_00145 c5ea74468e46d959135e8c35fc46b2a1 243 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 13 229 2.3E-39 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_00145 c5ea74468e46d959135e8c35fc46b2a1 243 Gene3D G3DSA:3.20.20.70 10 236 1.4E-64 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_00145 c5ea74468e46d959135e8c35fc46b2a1 243 SUPERFAMILY SSF51366 11 234 1.13E-56 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XFUD_00145 c5ea74468e46d959135e8c35fc46b2a1 243 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 14 231 5.0E-61 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_00145 c5ea74468e46d959135e8c35fc46b2a1 243 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 66 79 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_00145 c5ea74468e46d959135e8c35fc46b2a1 243 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 11 235 32.449 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_00145 c5ea74468e46d959135e8c35fc46b2a1 243 SMART SM00934 13 230 2.4E-66 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 XFUD_00320 91e523f9365591765439a73a3c7c0f14 323 SUPERFAMILY SSF49401 171 323 6.96E-27 T 11-10-2018 IPR008966 Adhesion domain superfamily XFUD_00320 91e523f9365591765439a73a3c7c0f14 323 Pfam PF00419 Fimbrial protein 170 323 2.4E-21 T 11-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 XFUD_00320 91e523f9365591765439a73a3c7c0f14 323 Gene3D G3DSA:2.60.40.3310 8 175 2.4E-44 T 11-10-2018 XFUD_00320 91e523f9365591765439a73a3c7c0f14 323 Gene3D G3DSA:2.60.40.1090 176 323 1.0E-31 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 XFUD_03275 03fab75e9269e08b99df4e0dc5a185dc 95 SUPERFAMILY SSF54637 2 90 3.27E-11 T 11-10-2018 IPR029069 HotDog domain superfamily XFUD_03275 03fab75e9269e08b99df4e0dc5a185dc 95 Gene3D G3DSA:3.10.129.10 1 93 6.7E-14 T 11-10-2018 XFUD_06295 e31bb49726a91f6b4a9291ef8370ff12 138 Pfam PF00816 H-NS histone family 18 116 9.0E-17 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 XFUD_06295 e31bb49726a91f6b4a9291ef8370ff12 138 SUPERFAMILY SSF81273 87 116 1.73E-5 T 11-10-2018 XFUD_06295 e31bb49726a91f6b4a9291ef8370ff12 138 Gene3D G3DSA:3.30.160.510 62 129 1.0E-23 T 11-10-2018 XFUD_06295 e31bb49726a91f6b4a9291ef8370ff12 138 SMART SM00528 83 126 3.2E-8 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 XFUD_04645 33efc72ea3063105f6d87fbbbe0be8ff 394 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 4 389 5.4E-136 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XFUD_04645 33efc72ea3063105f6d87fbbbe0be8ff 394 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 165 391 1.7E-79 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 XFUD_04645 33efc72ea3063105f6d87fbbbe0be8ff 394 PIRSF PIRSF000484 1 378 3.2E-67 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 XFUD_04645 33efc72ea3063105f6d87fbbbe0be8ff 394 Gene3D G3DSA:3.20.140.10 1 394 4.7E-148 T 11-10-2018 XFUD_04645 33efc72ea3063105f6d87fbbbe0be8ff 394 SUPERFAMILY SSF54675 2 137 1.27E-43 T 11-10-2018 XFUD_04645 33efc72ea3063105f6d87fbbbe0be8ff 394 SUPERFAMILY SSF51690 120 390 1.82E-85 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XFUD_04645 33efc72ea3063105f6d87fbbbe0be8ff 394 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 392 50.506 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 XFUD_04015 451e2c60bbed501bc8080d8328b86aa6 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 44 60 1.1E-10 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XFUD_04015 451e2c60bbed501bc8080d8328b86aa6 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 85 98 1.1E-10 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XFUD_04015 451e2c60bbed501bc8080d8328b86aa6 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 65 79 1.1E-10 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XFUD_04015 451e2c60bbed501bc8080d8328b86aa6 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 215 227 1.1E-10 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XFUD_04015 451e2c60bbed501bc8080d8328b86aa6 311 Gene3D G3DSA:3.40.50.150 43 273 1.1E-37 T 11-10-2018 XFUD_04015 451e2c60bbed501bc8080d8328b86aa6 311 SUPERFAMILY SSF53335 42 303 9.35E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_04015 451e2c60bbed501bc8080d8328b86aa6 311 Gene3D G3DSA:1.10.1020.10 92 194 1.1E-37 T 11-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 XFUD_04015 451e2c60bbed501bc8080d8328b86aa6 311 PIRSF PIRSF000398 23 307 7.9E-70 T 11-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 XFUD_04015 451e2c60bbed501bc8080d8328b86aa6 311 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 44 274 1.2E-20 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 XFUD_02615 873d6276d04211ab2983edcd2c47a4fc 131 Pfam PF10137 Predicted nucleotide-binding protein containing TIR-like domain 1 104 7.3E-29 T 11-10-2018 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain XFUD_02585 e210c0ca8e4a844a2e33f03e03d9f35f 112 Gene3D G3DSA:3.30.70.120 1 112 1.3E-39 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XFUD_02585 e210c0ca8e4a844a2e33f03e03d9f35f 112 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 3.3E-30 T 11-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 XFUD_02585 e210c0ca8e4a844a2e33f03e03d9f35f 112 SUPERFAMILY SSF54913 2 106 1.63E-33 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta XFUD_02340 1c3b9da9e80134c1de638f2dfc827c97 151 SUPERFAMILY SSF49503 24 147 1.69E-41 T 11-10-2018 IPR008972 Cupredoxin XFUD_02340 1c3b9da9e80134c1de638f2dfc827c97 151 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 150 5.0E-69 T 11-10-2018 XFUD_02340 1c3b9da9e80134c1de638f2dfc827c97 151 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 24 148 8.9E-21 T 11-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 XFUD_02340 1c3b9da9e80134c1de638f2dfc827c97 151 TIGRFAM TIGR02695 azurin: azurin 25 148 4.4E-56 T 11-10-2018 IPR014068 Azurin XFUD_02340 1c3b9da9e80134c1de638f2dfc827c97 151 Gene3D G3DSA:2.60.40.420 23 149 7.3E-42 T 11-10-2018 IPR008972 Cupredoxin XFUD_05455 f4e3062be80cf285de8bc2ef435ee1dc 167 Pfam PF02542 YgbB family 6 159 9.7E-62 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XFUD_05455 f4e3062be80cf285de8bc2ef435ee1dc 167 Gene3D G3DSA:3.30.1330.50 4 166 4.4E-66 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XFUD_05455 f4e3062be80cf285de8bc2ef435ee1dc 167 SUPERFAMILY SSF69765 5 162 1.57E-63 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XFUD_05455 f4e3062be80cf285de8bc2ef435ee1dc 167 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 7 160 3.4E-69 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XFUD_05455 f4e3062be80cf285de8bc2ef435ee1dc 167 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 6 161 34.492 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XFUD_05455 f4e3062be80cf285de8bc2ef435ee1dc 167 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 40 55 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 XFUD_04280 f6d1cd6fe57fff8ef754a86fec11ab45 364 SUPERFAMILY SSF53187 3 362 5.09E-35 T 11-10-2018 XFUD_04280 f6d1cd6fe57fff8ef754a86fec11ab45 364 Pfam PF01546 Peptidase family M20/M25/M40 67 362 9.1E-21 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 XFUD_04280 f6d1cd6fe57fff8ef754a86fec11ab45 364 SUPERFAMILY SSF55031 165 265 3.49E-13 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain XFUD_04280 f6d1cd6fe57fff8ef754a86fec11ab45 364 Gene3D G3DSA:3.30.70.360 166 279 2.2E-106 T 11-10-2018 XFUD_04280 f6d1cd6fe57fff8ef754a86fec11ab45 364 Pfam PF07687 Peptidase dimerisation domain 163 265 5.5E-15 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain XFUD_04280 f6d1cd6fe57fff8ef754a86fec11ab45 364 Gene3D G3DSA:3.40.630.10 15 350 2.2E-106 T 11-10-2018 XFUD_03965 00b85db34ceb71c814c52aacb438f77b 381 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 78 292 1.5E-70 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 XFUD_03965 00b85db34ceb71c814c52aacb438f77b 381 Gene3D G3DSA:1.10.10.10 307 377 1.3E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_03965 00b85db34ceb71c814c52aacb438f77b 381 Pfam PF02481 DNA recombination-mediator protein A 83 284 3.2E-72 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 XFUD_03965 00b85db34ceb71c814c52aacb438f77b 381 SUPERFAMILY SSF102405 87 291 1.72E-39 T 11-10-2018 XFUD_03965 00b85db34ceb71c814c52aacb438f77b 381 Gene3D G3DSA:3.40.50.450 3 297 5.7E-94 T 11-10-2018 XFUD_05945 604aa89ccfd6bf2567d016ce2cc46324 333 Gene3D G3DSA:3.40.50.10490 12 204 1.5E-60 T 11-10-2018 XFUD_05945 604aa89ccfd6bf2567d016ce2cc46324 333 Pfam PF01380 SIS domain 50 181 1.8E-29 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XFUD_05945 604aa89ccfd6bf2567d016ce2cc46324 333 Pfam PF00571 CBS domain 279 330 5.2E-7 T 11-10-2018 IPR000644 CBS domain XFUD_05945 604aa89ccfd6bf2567d016ce2cc46324 333 Pfam PF00571 CBS domain 211 267 7.3E-9 T 11-10-2018 IPR000644 CBS domain XFUD_05945 604aa89ccfd6bf2567d016ce2cc46324 333 SMART SM00116 284 332 4.4E-4 T 11-10-2018 IPR000644 CBS domain XFUD_05945 604aa89ccfd6bf2567d016ce2cc46324 333 SMART SM00116 219 267 5.2E-5 T 11-10-2018 IPR000644 CBS domain XFUD_05945 604aa89ccfd6bf2567d016ce2cc46324 333 PIRSF PIRSF004692 4 333 6.5E-135 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 XFUD_05945 604aa89ccfd6bf2567d016ce2cc46324 333 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 54 323 5.0E-112 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 XFUD_05945 604aa89ccfd6bf2567d016ce2cc46324 333 SUPERFAMILY SSF53697 20 330 7.56E-69 T 11-10-2018 XFUD_05945 604aa89ccfd6bf2567d016ce2cc46324 333 Gene3D G3DSA:3.10.580.10 205 330 4.3E-46 T 11-10-2018 XFUD_03175 00f8205e7b7de839c996dbb2f98d1c51 362 Pfam PF00570 HRDC domain 214 256 1.5E-4 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 XFUD_03175 00f8205e7b7de839c996dbb2f98d1c51 362 Pfam PF01612 3'-5' exonuclease 3 167 4.6E-27 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XFUD_03175 00f8205e7b7de839c996dbb2f98d1c51 362 Gene3D G3DSA:1.10.150.80 295 361 3.6E-5 T 11-10-2018 XFUD_03175 00f8205e7b7de839c996dbb2f98d1c51 362 SUPERFAMILY SSF47819 195 282 2.83E-13 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 XFUD_03175 00f8205e7b7de839c996dbb2f98d1c51 362 TIGRFAM TIGR01388 rnd: ribonuclease D 4 358 5.4E-148 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 XFUD_03175 00f8205e7b7de839c996dbb2f98d1c51 362 SUPERFAMILY SSF53098 2 188 4.99E-55 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFUD_03175 00f8205e7b7de839c996dbb2f98d1c51 362 SUPERFAMILY SSF47819 294 358 4.58E-11 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 XFUD_03175 00f8205e7b7de839c996dbb2f98d1c51 362 Gene3D G3DSA:3.30.420.10 3 190 4.0E-54 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFUD_03175 00f8205e7b7de839c996dbb2f98d1c51 362 SMART SM00474 2 168 2.6E-30 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 XFUD_03175 00f8205e7b7de839c996dbb2f98d1c51 362 Gene3D G3DSA:1.10.150.80 192 293 3.2E-6 T 11-10-2018 XFUD_07760 0f57a2a4493a20fc0c6cff2fd6605bba 389 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 19 379 2.6E-46 T 11-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 XFUD_07760 0f57a2a4493a20fc0c6cff2fd6605bba 389 Pfam PF07219 HemY protein N-terminus 33 132 1.6E-15 T 11-10-2018 IPR010817 HemY, N-terminal XFUD_07760 0f57a2a4493a20fc0c6cff2fd6605bba 389 SUPERFAMILY SSF48452 130 383 1.67E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_05105 bd6418adb5ca6485d750469acf01f367 236 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 XFUD_05105 bd6418adb5ca6485d750469acf01f367 236 Gene3D G3DSA:3.10.290.10 1 54 1.5E-7 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 XFUD_05105 bd6418adb5ca6485d750469acf01f367 236 Gene3D G3DSA:3.30.70.1560 128 210 7.0E-47 T 11-10-2018 XFUD_05105 bd6418adb5ca6485d750469acf01f367 236 SUPERFAMILY SSF55120 60 227 3.52E-37 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_05105 bd6418adb5ca6485d750469acf01f367 236 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 64 223 1.5E-39 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 XFUD_05105 bd6418adb5ca6485d750469acf01f367 236 Pfam PF00849 RNA pseudouridylate synthase 61 191 1.8E-12 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 XFUD_05105 bd6418adb5ca6485d750469acf01f367 236 Gene3D G3DSA:3.30.70.580 61 226 7.0E-47 T 11-10-2018 XFUD_03010 b106f18eaeacd564e95d8b6055a98c40 532 Pfam PF05136 Phage portal protein, lambda family 53 396 1.3E-97 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XFUD_03010 b106f18eaeacd564e95d8b6055a98c40 532 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 45 503 6.4E-215 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XFUD_10855 b106f18eaeacd564e95d8b6055a98c40 532 Pfam PF05136 Phage portal protein, lambda family 53 396 1.3E-97 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XFUD_10855 b106f18eaeacd564e95d8b6055a98c40 532 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 45 503 6.4E-215 T 11-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 XFUD_09085 6fe3fcecb54778c6cfb590d62c81b328 255 SUPERFAMILY SSF111331 26 242 1.31E-55 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily XFUD_09085 6fe3fcecb54778c6cfb590d62c81b328 255 Pfam PF01513 ATP-NAD kinase 34 217 5.5E-15 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 XFUD_09085 6fe3fcecb54778c6cfb590d62c81b328 255 Gene3D G3DSA:3.40.50.10330 30 232 2.4E-38 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 XFUD_09085 6fe3fcecb54778c6cfb590d62c81b328 255 Gene3D G3DSA:2.60.200.30 96 230 2.4E-38 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 XFUD_09085 6fe3fcecb54778c6cfb590d62c81b328 255 Hamap MF_00361 NAD kinase [nadK]. 5 254 21.243 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 XFUD_09780 f8fc8354063144cfa261d3e0725271e7 264 ProSitePatterns PS00761 Signal peptidases I signature 3. 207 220 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 XFUD_09780 f8fc8354063144cfa261d3e0725271e7 264 ProSitePatterns PS00760 Signal peptidases I lysine active site. 129 141 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 XFUD_09780 f8fc8354063144cfa261d3e0725271e7 264 SUPERFAMILY SSF51306 61 249 5.75E-62 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XFUD_09780 f8fc8354063144cfa261d3e0725271e7 264 Gene3D G3DSA:2.10.109.10 61 244 5.2E-60 T 11-10-2018 XFUD_09780 f8fc8354063144cfa261d3e0725271e7 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 202 221 6.7E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XFUD_09780 f8fc8354063144cfa261d3e0725271e7 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 127 139 6.7E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XFUD_09780 f8fc8354063144cfa261d3e0725271e7 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 63 79 6.7E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XFUD_09780 f8fc8354063144cfa261d3e0725271e7 264 Pfam PF00717 Peptidase S24-like 69 151 5.4E-21 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XFUD_09780 f8fc8354063144cfa261d3e0725271e7 264 Gene3D G3DSA:2.170.230.10 138 201 5.2E-60 T 11-10-2018 XFUD_09780 f8fc8354063144cfa261d3e0725271e7 264 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 48 244 5.6E-44 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 XFUD_06730 9f55c9fdffb6a7a981384a2bf12cdd9a 140 ProDom PD298513 SIMILAR PD1186 XF1585/XF1690 PD0970 9 127 2.0E-55 T 11-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC XFUD_06730 9f55c9fdffb6a7a981384a2bf12cdd9a 140 Pfam PF10876 Phage tail assemb.y chaperone protein, TAC 7 139 5.5E-67 T 11-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC XFUD_07225 9f55c9fdffb6a7a981384a2bf12cdd9a 140 ProDom PD298513 SIMILAR PD1186 XF1585/XF1690 PD0970 9 127 2.0E-55 T 11-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC XFUD_07225 9f55c9fdffb6a7a981384a2bf12cdd9a 140 Pfam PF10876 Phage tail assemb.y chaperone protein, TAC 7 139 5.5E-67 T 11-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC XFUD_11060 ea2defc0497a150d07408da9549edab6 445 SMART SM00387 342 445 6.6E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_11060 ea2defc0497a150d07408da9549edab6 445 Gene3D G3DSA:1.10.287.130 185 302 1.3E-20 T 11-10-2018 XFUD_11060 ea2defc0497a150d07408da9549edab6 445 SUPERFAMILY SSF47384 219 302 1.8E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 XFUD_11060 ea2defc0497a150d07408da9549edab6 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 8.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_11060 ea2defc0497a150d07408da9549edab6 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 8.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 XFUD_11060 ea2defc0497a150d07408da9549edab6 445 SUPERFAMILY SSF55874 306 443 2.1E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_11060 ea2defc0497a150d07408da9549edab6 445 SMART SM00388 236 302 4.9E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_11060 ea2defc0497a150d07408da9549edab6 445 Gene3D G3DSA:3.30.565.10 304 445 9.8E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily XFUD_11060 ea2defc0497a150d07408da9549edab6 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 302 4.6E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 XFUD_11060 ea2defc0497a150d07408da9549edab6 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 436 1.3E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 284 300 1.1E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 80 91 1.1E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 308 321 1.1E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 238 251 1.1E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 211 222 1.1E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 Pfam PF01411 tRNA synthetases class II (A) 11 560 4.4E-212 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 661 703 5.1E-17 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 SUPERFAMILY SSF101353 258 448 1.96E-57 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 Gene3D G3DSA:3.30.54.20 632 684 1.5E-47 T 11-10-2018 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 SUPERFAMILY SSF50447 459 558 2.26E-16 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 Pfam PF02272 DHHA1 domain 740 879 7.3E-23 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 Gene3D G3DSA:3.30.980.10 571 704 1.5E-47 T 11-10-2018 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 Gene3D G3DSA:3.30.930.10 7 254 2.4E-118 T 11-10-2018 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 Gene3D G3DSA:2.40.30.130 476 560 1.2E-8 T 11-10-2018 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 SMART SM00863 661 703 2.2E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 SUPERFAMILY SSF55186 562 719 2.09E-48 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 SUPERFAMILY SSF55681 7 257 2.73E-106 T 11-10-2018 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 883 185.625 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 Gene3D G3DSA:3.10.310.40 771 880 2.0E-21 T 11-10-2018 XFUD_00510 e6179bbb5dfa24d5cd459c399d314411 884 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 11 862 2.4E-295 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 XFUD_02000 c8145bf448ace19001e6688e1fd7ecaf 148 PIRSF PIRSF002070 1 148 4.7E-34 T 11-10-2018 XFUD_02000 c8145bf448ace19001e6688e1fd7ecaf 148 Pfam PF00436 Single-strand binding protein family 5 108 7.1E-37 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XFUD_02000 c8145bf448ace19001e6688e1fd7ecaf 148 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 126 1.1E-43 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XFUD_02000 c8145bf448ace19001e6688e1fd7ecaf 148 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 34.166 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XFUD_02000 c8145bf448ace19001e6688e1fd7ecaf 148 SUPERFAMILY SSF50249 3 148 9.94E-50 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_02000 c8145bf448ace19001e6688e1fd7ecaf 148 Gene3D G3DSA:2.40.50.140 1 124 1.7E-42 T 11-10-2018 XFUD_05900 0f7794049b7b8a9f78d2036e4daab220 130 Pfam PF03610 PTS system fructose IIA component 4 104 5.8E-14 T 11-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 XFUD_05900 0f7794049b7b8a9f78d2036e4daab220 130 SUPERFAMILY SSF53062 4 125 3.66E-24 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 XFUD_05900 0f7794049b7b8a9f78d2036e4daab220 130 Gene3D G3DSA:3.40.50.510 3 129 3.1E-24 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 XFUD_05720 eb63d373b97d7081d91e47bdf45194bf 301 Gene3D G3DSA:1.10.357.140 13 191 7.7E-18 T 11-10-2018 XFUD_05720 eb63d373b97d7081d91e47bdf45194bf 301 Pfam PF01040 UbiA prenyltransferase family 21 273 5.2E-55 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 XFUD_05720 eb63d373b97d7081d91e47bdf45194bf 301 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 4 292 19.498 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 XFUD_05720 eb63d373b97d7081d91e47bdf45194bf 301 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 62 84 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site XFUD_05720 eb63d373b97d7081d91e47bdf45194bf 301 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 6 290 9.4E-90 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 XFUD_09075 e30038a138cddcc916d20d5a258c4a04 139 Gene3D G3DSA:2.60.120.10 13 134 4.5E-20 T 11-10-2018 IPR014710 RmlC-like jelly roll fold XFUD_09075 e30038a138cddcc916d20d5a258c4a04 139 PIRSF PIRSF037087 1 139 3.1E-80 T 11-10-2018 IPR017102 Uncharacterised conserved protein UCP037087 XFUD_09075 e30038a138cddcc916d20d5a258c4a04 139 SUPERFAMILY SSF51182 10 133 2.77E-24 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily XFUD_09075 e30038a138cddcc916d20d5a258c4a04 139 Pfam PF07883 Cupin domain 47 117 5.7E-18 T 11-10-2018 IPR013096 Cupin 2, conserved barrel XFUD_06375 01b93f6a72066cc3736de263e3a62716 112 Pfam PF07238 PilZ domain 24 108 4.5E-7 T 11-10-2018 IPR009875 PilZ domain GO:0035438 XFUD_06375 01b93f6a72066cc3736de263e3a62716 112 Gene3D G3DSA:2.40.10.220 2 111 3.8E-7 T 11-10-2018 XFUD_02740 e52d8765d0d7fdcb817623fab1361bc7 564 Gene3D G3DSA:3.40.720.10 38 544 1.6E-170 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XFUD_02740 e52d8765d0d7fdcb817623fab1361bc7 564 PRINTS PR00113 Alkaline phosphatase signature 65 85 3.8E-42 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XFUD_02740 e52d8765d0d7fdcb817623fab1361bc7 564 PRINTS PR00113 Alkaline phosphatase signature 167 187 3.8E-42 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XFUD_02740 e52d8765d0d7fdcb817623fab1361bc7 564 PRINTS PR00113 Alkaline phosphatase signature 318 347 3.8E-42 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XFUD_02740 e52d8765d0d7fdcb817623fab1361bc7 564 PRINTS PR00113 Alkaline phosphatase signature 230 240 3.8E-42 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XFUD_02740 e52d8765d0d7fdcb817623fab1361bc7 564 PRINTS PR00113 Alkaline phosphatase signature 121 136 3.8E-42 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XFUD_02740 e52d8765d0d7fdcb817623fab1361bc7 564 SUPERFAMILY SSF53649 47 528 1.96E-143 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 XFUD_02740 e52d8765d0d7fdcb817623fab1361bc7 564 SMART SM00098 66 531 4.1E-147 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XFUD_02740 e52d8765d0d7fdcb817623fab1361bc7 564 Pfam PF00245 Alkaline phosphatase 65 527 2.8E-124 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 XFUD_05435 0d0fa98980db205622301cde5f4689ed 276 Pfam PF00793 DAHP synthetase I family 8 265 3.9E-65 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XFUD_05435 0d0fa98980db205622301cde5f4689ed 276 Gene3D G3DSA:3.20.20.70 2 275 9.5E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_05435 0d0fa98980db205622301cde5f4689ed 276 SUPERFAMILY SSF51569 2 270 3.66E-105 T 11-10-2018 XFUD_05435 0d0fa98980db205622301cde5f4689ed 276 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 52.127 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XFUD_05435 0d0fa98980db205622301cde5f4689ed 276 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 269 2.9E-129 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 XFUD_04220 81b5e4ca8bf2f59d7cb8e71ad0796c45 554 Pfam PF00990 Diguanylate cyclase, GGDEF domain 393 549 6.4E-39 T 11-10-2018 IPR000160 GGDEF domain XFUD_04220 81b5e4ca8bf2f59d7cb8e71ad0796c45 554 SUPERFAMILY SSF55073 398 551 5.96E-43 T 11-10-2018 IPR029787 Nucleotide cyclase XFUD_04220 81b5e4ca8bf2f59d7cb8e71ad0796c45 554 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 393 551 1.5E-42 T 11-10-2018 IPR000160 GGDEF domain XFUD_04220 81b5e4ca8bf2f59d7cb8e71ad0796c45 554 Pfam PF07695 7TM diverse intracellular signalling 171 377 3.9E-22 T 11-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 XFUD_04220 81b5e4ca8bf2f59d7cb8e71ad0796c45 554 Pfam PF07696 7TMR-DISM extracellular 2 65 157 4.9E-6 T 11-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 XFUD_04220 81b5e4ca8bf2f59d7cb8e71ad0796c45 554 SMART SM00267 382 553 2.5E-50 T 11-10-2018 IPR000160 GGDEF domain XFUD_04220 81b5e4ca8bf2f59d7cb8e71ad0796c45 554 Gene3D G3DSA:3.30.70.270 387 553 1.6E-51 T 11-10-2018 XFUD_11750 d9aede4050616d41130ec25886700b9f 436 Gene3D G3DSA:2.70.70.10 301 434 6.0E-33 T 11-10-2018 IPR011055 Duplicated hybrid motif XFUD_11750 d9aede4050616d41130ec25886700b9f 436 SUPERFAMILY SSF51261 216 433 1.18E-44 T 11-10-2018 IPR011055 Duplicated hybrid motif XFUD_11750 d9aede4050616d41130ec25886700b9f 436 Pfam PF01551 Peptidase family M23 336 429 4.1E-26 T 11-10-2018 IPR016047 Peptidase M23 XFUD_04600 4593615afb87e59af3fd3eb435a09320 145 Gene3D G3DSA:3.30.420.270 61 132 1.4E-11 T 11-10-2018 XFUD_04600 4593615afb87e59af3fd3eb435a09320 145 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 136 9.6E-31 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 XFUD_07440 0bdecd9ec52230b91f85a492f656601a 126 Pfam PF10012 Uncharacterized protein conserved in bacteria (DUF2255) 6 118 1.3E-43 T 11-10-2018 IPR016888 Uncharacterised conserved protein UCP028498 XFUD_07440 0bdecd9ec52230b91f85a492f656601a 126 PIRSF PIRSF028498 1 126 1.1E-64 T 11-10-2018 IPR016888 Uncharacterised conserved protein UCP028498 XFUD_07980 2fd257833da64cabe27fb6ab3fa0425c 469 SUPERFAMILY SSF55931 103 467 5.59E-130 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 XFUD_07980 2fd257833da64cabe27fb6ab3fa0425c 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.1E-131 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XFUD_07980 2fd257833da64cabe27fb6ab3fa0425c 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 467 7.0E-193 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XFUD_07980 2fd257833da64cabe27fb6ab3fa0425c 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 XFUD_07980 2fd257833da64cabe27fb6ab3fa0425c 469 SUPERFAMILY SSF54368 3 100 4.58E-36 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XFUD_07980 2fd257833da64cabe27fb6ab3fa0425c 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.8E-29 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 XFUD_07980 2fd257833da64cabe27fb6ab3fa0425c 469 Gene3D G3DSA:3.30.590.10 105 457 1.0E-138 T 11-10-2018 XFUD_07980 2fd257833da64cabe27fb6ab3fa0425c 469 Gene3D G3DSA:3.10.20.70 2 104 1.1E-37 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XFUD_07980 2fd257833da64cabe27fb6ab3fa0425c 469 SMART SM01230 102 379 2.3E-136 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 XFUD_07980 2fd257833da64cabe27fb6ab3fa0425c 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 XFUD_01110 6abee08b20800a33993b0c696710a0ad 302 Gene3D G3DSA:3.40.50.720 3 284 2.2E-103 T 11-10-2018 XFUD_01110 6abee08b20800a33993b0c696710a0ad 302 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 296 3.2E-119 T 11-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 XFUD_01110 6abee08b20800a33993b0c696710a0ad 302 SUPERFAMILY SSF51735 2 298 1.02E-92 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_01110 6abee08b20800a33993b0c696710a0ad 302 Pfam PF04321 RmlD substrate binding domain 2 297 2.8E-108 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 XFUD_01110 6abee08b20800a33993b0c696710a0ad 302 Gene3D G3DSA:3.90.25.10 167 291 2.2E-103 T 11-10-2018 XFUD_00795 7b6af5be6cef03543b50760d3db60bea 277 TIGRFAM TIGR00444 mazG: MazG family protein 17 267 2.0E-78 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG XFUD_00795 7b6af5be6cef03543b50760d3db60bea 277 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 34 107 1.3E-27 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core XFUD_00795 7b6af5be6cef03543b50760d3db60bea 277 SUPERFAMILY SSF101386 10 111 3.74E-24 T 11-10-2018 XFUD_00795 7b6af5be6cef03543b50760d3db60bea 277 SUPERFAMILY SSF101386 147 246 5.61E-8 T 11-10-2018 XFUD_00795 7b6af5be6cef03543b50760d3db60bea 277 Gene3D G3DSA:1.10.287.1080 138 273 2.6E-27 T 11-10-2018 XFUD_00795 7b6af5be6cef03543b50760d3db60bea 277 Gene3D G3DSA:1.10.287.1080 8 132 5.2E-44 T 11-10-2018 XFUD_09590 8dcae66a2ab6f904288157d63e2912cd 306 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 304 2.5E-89 T 11-10-2018 XFUD_09590 8dcae66a2ab6f904288157d63e2912cd 306 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 304 29.576 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 XFUD_09590 8dcae66a2ab6f904288157d63e2912cd 306 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 4 297 1.2E-61 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 XFUD_09590 8dcae66a2ab6f904288157d63e2912cd 306 PIRSF PIRSF000401 1 306 3.4E-76 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 XFUD_09590 8dcae66a2ab6f904288157d63e2912cd 306 SUPERFAMILY SSF53335 83 282 3.52E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_09590 8dcae66a2ab6f904288157d63e2912cd 306 Gene3D G3DSA:3.40.50.150 106 305 4.6E-47 T 11-10-2018 XFUD_00045 79a85e3f0afcf81b138a1c8ac082b217 221 Gene3D G3DSA:3.30.1150.10 127 221 8.6E-27 T 11-10-2018 XFUD_00045 79a85e3f0afcf81b138a1c8ac082b217 221 PRINTS PR01374 Gram-negative bacterial tonB protein signature 160 178 6.5E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XFUD_00045 79a85e3f0afcf81b138a1c8ac082b217 221 PRINTS PR01374 Gram-negative bacterial tonB protein signature 67 77 6.5E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XFUD_00045 79a85e3f0afcf81b138a1c8ac082b217 221 PRINTS PR01374 Gram-negative bacterial tonB protein signature 139 160 6.5E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XFUD_00045 79a85e3f0afcf81b138a1c8ac082b217 221 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 145 221 2.5E-24 T 11-10-2018 IPR006260 TonB/TolA, C-terminal XFUD_00045 79a85e3f0afcf81b138a1c8ac082b217 221 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 144 221 6.7E-24 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 XFUD_00045 79a85e3f0afcf81b138a1c8ac082b217 221 SUPERFAMILY SSF74653 143 219 1.96E-23 T 11-10-2018 XFUD_08940 1d84ee7a1b6305a89e4e7a8853b68bf2 178 TIGRFAM TIGR02771 TraF_Ti: conjugative transfer signal peptidase TraF 11 178 4.6E-70 T 11-10-2018 IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF GO:0000746|GO:0042597 XFUD_08940 1d84ee7a1b6305a89e4e7a8853b68bf2 178 SUPERFAMILY SSF51306 31 176 1.36E-17 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XFUD_08940 1d84ee7a1b6305a89e4e7a8853b68bf2 178 Pfam PF10502 Signal peptidase, peptidase S26 32 177 4.4E-42 T 11-10-2018 IPR019533 Peptidase S26 XFUD_08940 1d84ee7a1b6305a89e4e7a8853b68bf2 178 Gene3D G3DSA:2.10.109.10 80 177 3.0E-10 T 11-10-2018 XFUD_00760 4b779179363dd02884ed1eddc3457dc2 260 Gene3D G3DSA:3.20.20.140 1 256 4.2E-78 T 11-10-2018 XFUD_00760 4b779179363dd02884ed1eddc3457dc2 260 SUPERFAMILY SSF51556 5 255 5.68E-79 T 11-10-2018 IPR032466 Metal-dependent hydrolase XFUD_00760 4b779179363dd02884ed1eddc3457dc2 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XFUD_00760 4b779179363dd02884ed1eddc3457dc2 260 Pfam PF01026 TatD related DNase 6 253 7.2E-69 T 11-10-2018 IPR001130 TatD family GO:0016788 XFUD_00760 4b779179363dd02884ed1eddc3457dc2 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XFUD_00760 4b779179363dd02884ed1eddc3457dc2 260 PIRSF PIRSF005902 1 258 8.9E-71 T 11-10-2018 IPR001130 TatD family GO:0016788 XFUD_00760 4b779179363dd02884ed1eddc3457dc2 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 127 137 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 XFUD_02430 0d0feb871c0525c494c310c9a9c5b839 227 Pfam PF11306 Protein of unknown function (DUF3108) 22 221 6.3E-14 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 XFUD_04770 01ea153a4b98887190b6427981d811d8 1279 Pfam PF13502 AsmA-like C-terminal region 1011 1253 1.2E-58 T 11-10-2018 IPR032712 AsmA-like, C-terminal XFUD_04770 01ea153a4b98887190b6427981d811d8 1279 Pfam PF13116 Protein of unknown function 507 782 9.8E-37 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 XFUD_04770 01ea153a4b98887190b6427981d811d8 1279 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 12 1263 9.6E-285 T 11-10-2018 IPR011836 Conserved hypothetical protein CHP02099 XFUD_03820 8d4102a27ff7d97cb102aed09c8384d0 283 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 283 9.3E-139 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFUD_01000 05e1d20c975ef5ffa8dafac696314ddd 199 Gene3D G3DSA:3.30.300.70 4 86 7.9E-18 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily XFUD_01000 05e1d20c975ef5ffa8dafac696314ddd 199 Pfam PF17384 RimP C-terminal SH3 domain 92 159 3.5E-19 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal XFUD_01000 05e1d20c975ef5ffa8dafac696314ddd 199 SUPERFAMILY SSF74942 90 159 4.58E-11 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily XFUD_01000 05e1d20c975ef5ffa8dafac696314ddd 199 SUPERFAMILY SSF75420 7 89 8.89E-20 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily XFUD_01000 05e1d20c975ef5ffa8dafac696314ddd 199 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 159 21.898 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 XFUD_01000 05e1d20c975ef5ffa8dafac696314ddd 199 Pfam PF02576 RimP N-terminal domain 11 89 2.6E-26 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal XFUD_04245 1107e5b56048c42352999dc343c24fd0 348 Pfam PF12146 Serine aminopeptidase, S33 84 212 5.2E-9 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 XFUD_04245 1107e5b56048c42352999dc343c24fd0 348 SUPERFAMILY SSF53474 80 330 1.91E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_04245 1107e5b56048c42352999dc343c24fd0 348 Gene3D G3DSA:3.40.50.1820 65 332 1.6E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_09300 676b87883b7b312a8d53ad372ea64abb 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 17 282 3.2E-89 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 XFUD_09300 676b87883b7b312a8d53ad372ea64abb 287 SUPERFAMILY SSF161098 25 273 3.27E-30 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_09300 676b87883b7b312a8d53ad372ea64abb 287 Gene3D G3DSA:1.10.3720.10 63 283 2.7E-24 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_09300 676b87883b7b312a8d53ad372ea64abb 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 276 1.1E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFUD_02075 78f1af13b35297b7a31538cb624a1cfd 156 SUPERFAMILY SSF88723 2 122 7.29E-6 T 11-10-2018 IPR029060 PIN-like domain superfamily XFUD_02075 78f1af13b35297b7a31538cb624a1cfd 156 PIRSF PIRSF008505 1 156 7.9E-70 T 11-10-2018 IPR016541 Uncharacterised conserved protein UCP008505 XFUD_02075 78f1af13b35297b7a31538cb624a1cfd 156 Pfam PF14367 Domain of unknown function (DUF4411) 3 156 5.9E-41 T 11-10-2018 IPR016541 Uncharacterised conserved protein UCP008505 XFUD_03305 0e5d161cbd0838351a4a293309c56835 697 SUPERFAMILY SSF52266 445 696 3.99E-5 T 11-10-2018 XFUD_03305 0e5d161cbd0838351a4a293309c56835 697 Pfam PF01757 Acyltransferase family 12 356 7.0E-28 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 XFUD_00585 802e87c41d3bc629a0d980f873548b6d 609 Gene3D G3DSA:3.40.50.10490 447 594 3.7E-140 T 11-10-2018 XFUD_00585 802e87c41d3bc629a0d980f873548b6d 609 Pfam PF01380 SIS domain 295 417 7.7E-30 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XFUD_00585 802e87c41d3bc629a0d980f873548b6d 609 Pfam PF01380 SIS domain 463 591 4.6E-26 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 XFUD_00585 802e87c41d3bc629a0d980f873548b6d 609 Pfam PF13522 Glutamine amidotransferase domain 63 192 4.6E-21 T 11-10-2018 XFUD_00585 802e87c41d3bc629a0d980f873548b6d 609 SUPERFAMILY SSF56235 2 233 1.54E-70 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFUD_00585 802e87c41d3bc629a0d980f873548b6d 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 38.629 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 XFUD_00585 802e87c41d3bc629a0d980f873548b6d 609 Gene3D G3DSA:3.40.50.10490 248 608 3.7E-140 T 11-10-2018 XFUD_00585 802e87c41d3bc629a0d980f873548b6d 609 SUPERFAMILY SSF53697 244 609 3.34E-112 T 11-10-2018 XFUD_00585 802e87c41d3bc629a0d980f873548b6d 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 5.1E-262 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 XFUD_00585 802e87c41d3bc629a0d980f873548b6d 609 Gene3D G3DSA:3.60.20.10 2 239 2.4E-75 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal XFUD_12280 7b039f06d15b41c08fc86951f3851ce5 161 Pfam PF13673 Acetyltransferase (GNAT) domain 80 147 1.3E-6 T 11-10-2018 IPR000182 GNAT domain XFUD_12280 7b039f06d15b41c08fc86951f3851ce5 161 SUPERFAMILY SSF55729 28 157 4.03E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFUD_12280 7b039f06d15b41c08fc86951f3851ce5 161 Gene3D G3DSA:3.40.630.30 1 160 1.2E-46 T 11-10-2018 XFUD_03740 86c04328aec071f23b5301bdd747eedb 860 Gene3D G3DSA:3.40.50.2000 12 395 9.1E-55 T 11-10-2018 XFUD_03740 86c04328aec071f23b5301bdd747eedb 860 Gene3D G3DSA:3.40.50.2000 655 823 2.8E-22 T 11-10-2018 XFUD_03740 86c04328aec071f23b5301bdd747eedb 860 Gene3D G3DSA:3.40.50.2000 200 383 9.1E-55 T 11-10-2018 XFUD_03740 86c04328aec071f23b5301bdd747eedb 860 Pfam PF00534 Glycosyl transferases group 1 676 819 3.1E-17 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 XFUD_03740 86c04328aec071f23b5301bdd747eedb 860 Pfam PF00534 Glycosyl transferases group 1 224 379 2.9E-28 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 XFUD_03740 86c04328aec071f23b5301bdd747eedb 860 SUPERFAMILY SSF53756 16 401 2.51E-64 T 11-10-2018 XFUD_03740 86c04328aec071f23b5301bdd747eedb 860 SUPERFAMILY SSF53756 538 842 1.15E-34 T 11-10-2018 XFUD_03740 86c04328aec071f23b5301bdd747eedb 860 Pfam PF13439 Glycosyltransferase Family 4 18 202 1.2E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XFUD_06970 957ae6fb7447ee545d60b0957a9081eb 151 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 34.484 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XFUD_06970 957ae6fb7447ee545d60b0957a9081eb 151 SUPERFAMILY SSF50249 3 151 9.94E-48 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_06970 957ae6fb7447ee545d60b0957a9081eb 151 Pfam PF00436 Single-strand binding protein family 5 108 6.8E-38 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 XFUD_06970 957ae6fb7447ee545d60b0957a9081eb 151 PIRSF PIRSF002070 1 151 1.1E-34 T 11-10-2018 XFUD_06970 957ae6fb7447ee545d60b0957a9081eb 151 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 126 1.8E-44 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 XFUD_06970 957ae6fb7447ee545d60b0957a9081eb 151 Gene3D G3DSA:2.40.50.140 1 124 7.1E-43 T 11-10-2018 XFUD_05320 02fceff3b2bba6d3f96136993a7e9015 193 SUPERFAMILY SSF53098 10 183 9.22E-43 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFUD_05320 02fceff3b2bba6d3f96136993a7e9015 193 Gene3D G3DSA:3.30.420.10 7 189 3.8E-67 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFUD_05320 02fceff3b2bba6d3f96136993a7e9015 193 Hamap MF_00045 Oligoribonuclease [orn]. 9 187 39.476 T 11-10-2018 IPR022894 Oligoribonuclease GO:0000175 XFUD_05320 02fceff3b2bba6d3f96136993a7e9015 193 Pfam PF00929 Exonuclease 15 176 4.4E-26 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFUD_05320 02fceff3b2bba6d3f96136993a7e9015 193 SMART SM00479 13 186 2.9E-7 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III XFUD_09895 3dd8b260b00f020ef5078db57bb0e526 547 SUPERFAMILY SSF56801 5 508 1.44E-73 T 11-10-2018 XFUD_09895 3dd8b260b00f020ef5078db57bb0e526 547 Gene3D G3DSA:3.40.50.12780 2 438 7.1E-70 T 11-10-2018 XFUD_09895 3dd8b260b00f020ef5078db57bb0e526 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 177 188 - T 11-10-2018 IPR020845 AMP-binding, conserved site XFUD_09895 3dd8b260b00f020ef5078db57bb0e526 547 Pfam PF00501 AMP-binding enzyme 18 443 3.3E-55 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 XFUD_04390 2a27bdcb2afbc63efbfd3b834d0f54a6 870 PIRSF PIRSF500064 30 869 0.0 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 XFUD_04390 2a27bdcb2afbc63efbfd3b834d0f54a6 870 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 51 861 31.174 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 XFUD_04390 2a27bdcb2afbc63efbfd3b834d0f54a6 870 PIRSF PIRSF000437 58 870 0.0 T 11-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 XFUD_04390 2a27bdcb2afbc63efbfd3b834d0f54a6 870 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 54 857 1.3E-296 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 XFUD_04390 2a27bdcb2afbc63efbfd3b834d0f54a6 870 Pfam PF01553 Acyltransferase 338 469 3.1E-21 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XFUD_04390 2a27bdcb2afbc63efbfd3b834d0f54a6 870 SMART SM00563 345 472 5.7E-26 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XFUD_04390 2a27bdcb2afbc63efbfd3b834d0f54a6 870 SUPERFAMILY SSF69593 304 527 1.44E-26 T 11-10-2018 XFUD_04025 922dbbdf811a8b686a17782ca04ef49b 292 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 8 251 36.007 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD XFUD_04025 922dbbdf811a8b686a17782ca04ef49b 292 Pfam PF13525 Outer membrane lipoprotein 39 244 3.4E-57 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like XFUD_04025 922dbbdf811a8b686a17782ca04ef49b 292 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 13 257 3.7E-80 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD XFUD_04025 922dbbdf811a8b686a17782ca04ef49b 292 Gene3D G3DSA:1.25.40.10 40 261 1.8E-54 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_04025 922dbbdf811a8b686a17782ca04ef49b 292 SUPERFAMILY SSF48452 41 173 8.19E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_06160 ebac74665323aec640acf441ea1d9855 429 Gene3D G3DSA:1.20.1250.20 231 416 6.5E-38 T 11-10-2018 XFUD_06160 ebac74665323aec640acf441ea1d9855 429 SUPERFAMILY SSF103473 10 423 4.84E-29 T 11-10-2018 IPR036259 MFS transporter superfamily XFUD_06160 ebac74665323aec640acf441ea1d9855 429 Gene3D G3DSA:1.20.1250.20 8 224 7.6E-43 T 11-10-2018 XFUD_06160 ebac74665323aec640acf441ea1d9855 429 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 93 410 8.8E-154 T 11-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 XFUD_06160 ebac74665323aec640acf441ea1d9855 429 Pfam PF07690 Major Facilitator Superfamily 18 376 2.0E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XFUD_04035 0e005ae4809136f76b6c22ee71221f7e 260 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 31 258 1.3E-50 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase XFUD_04035 0e005ae4809136f76b6c22ee71221f7e 260 Gene3D G3DSA:3.60.140.10 3 259 8.9E-76 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily XFUD_04035 0e005ae4809136f76b6c22ee71221f7e 260 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 26 257 8.3E-68 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase XFUD_04035 0e005ae4809136f76b6c22ee71221f7e 260 SUPERFAMILY SSF64438 7 258 1.83E-71 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic XFUD_12210 0a332439be9d1294eb59c9535edbccf5 273 PIRSF PIRSF003299 2 227 3.2E-73 T 11-10-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 XFUD_12210 0a332439be9d1294eb59c9535edbccf5 273 Pfam PF04335 VirB8 protein 17 223 2.5E-62 T 11-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 XFUD_12210 0a332439be9d1294eb59c9535edbccf5 273 Gene3D G3DSA:3.10.450.230 84 232 1.4E-46 T 11-10-2018 XFUD_12210 0a332439be9d1294eb59c9535edbccf5 273 SUPERFAMILY SSF54427 88 224 6.13E-40 T 11-10-2018 IPR032710 NTF2-like domain superfamily XFUD_01370 12f623df3b9d00056868bf7009e7142d 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 6.6E-23 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like XFUD_01370 12f623df3b9d00056868bf7009e7142d 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 19.871 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 XFUD_09950 5146e682aa1d8bfaf7bd20ecf7edac65 104 SUPERFAMILY SSF52540 27 91 3.98E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_09950 5146e682aa1d8bfaf7bd20ecf7edac65 104 Gene3D G3DSA:3.40.50.300 23 103 4.3E-7 T 11-10-2018 XFUD_02530 2c78f5d08fada16f94d2694a4540c305 456 SUPERFAMILY SSF53335 22 168 7.97E-16 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_02530 2c78f5d08fada16f94d2694a4540c305 456 Gene3D G3DSA:3.40.50.150 16 179 4.2E-14 T 11-10-2018 XFUD_02530 2c78f5d08fada16f94d2694a4540c305 456 Pfam PF05050 Methyltransferase FkbM domain 30 190 1.6E-17 T 11-10-2018 IPR006342 Methyltransferase FkbM XFUD_02530 2c78f5d08fada16f94d2694a4540c305 456 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 28 154 1.2E-16 T 11-10-2018 IPR006342 Methyltransferase FkbM XFUD_05780 ea4c318dd5a3a2cf4c7b8e3ae477d072 220 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 11 206 3.1E-41 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 XFUD_05780 ea4c318dd5a3a2cf4c7b8e3ae477d072 220 SUPERFAMILY SSF51366 8 209 8.0E-54 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XFUD_05780 ea4c318dd5a3a2cf4c7b8e3ae477d072 220 Gene3D G3DSA:3.20.20.70 6 214 4.9E-58 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_05780 ea4c318dd5a3a2cf4c7b8e3ae477d072 220 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 8 211 35.438 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 XFUD_08925 31c42072a8cbbf6e4935fe5108346dd5 106 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 5 84 6.3E-16 T 11-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB XFUD_08925 31c42072a8cbbf6e4935fe5108346dd5 106 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 13 91 1.0E-40 T 11-10-2018 XFUD_08925 31c42072a8cbbf6e4935fe5108346dd5 106 PIRSF PIRSF017854 1 89 2.2E-36 T 11-10-2018 IPR016704 Conjugal transfer, TrbD XFUD_05850 85daa8092ac0d2412a029070d4345998 319 Gene3D G3DSA:1.10.287.90 28 113 9.2E-33 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05850 85daa8092ac0d2412a029070d4345998 319 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 16 240 7.9E-112 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 XFUD_05850 85daa8092ac0d2412a029070d4345998 319 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 224 4.1E-8 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05850 85daa8092ac0d2412a029070d4345998 319 SUPERFAMILY SSF81464 30 117 3.92E-22 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 XFUD_05850 85daa8092ac0d2412a029070d4345998 319 Pfam PF06481 COX Aromatic Rich Motif 240 288 1.2E-15 T 11-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 XFUD_05850 85daa8092ac0d2412a029070d4345998 319 PIRSF PIRSF000292 2 315 2.7E-133 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 XFUD_05850 85daa8092ac0d2412a029070d4345998 319 SUPERFAMILY SSF49503 122 285 1.22E-48 T 11-10-2018 IPR008972 Cupredoxin XFUD_05850 85daa8092ac0d2412a029070d4345998 319 Gene3D G3DSA:2.60.40.420 114 285 5.3E-57 T 11-10-2018 IPR008972 Cupredoxin XFUD_11760 d90031bac19fa99be7f4bed8f818d303 356 Gene3D G3DSA:3.20.20.80 37 353 8.3E-93 T 11-10-2018 XFUD_11760 d90031bac19fa99be7f4bed8f818d303 356 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 58 316 3.1E-48 T 11-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 XFUD_11760 d90031bac19fa99be7f4bed8f818d303 356 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 162 171 - T 11-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 XFUD_11760 d90031bac19fa99be7f4bed8f818d303 356 SUPERFAMILY SSF51445 37 341 1.04E-74 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFUD_11620 d13a71dbce3341449469ac1472923bc4 104 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 1.0E-39 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related XFUD_11620 d13a71dbce3341449469ac1472923bc4 104 Pfam PF00462 Glutaredoxin 17 81 2.1E-15 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 XFUD_11620 d13a71dbce3341449469ac1472923bc4 104 PIRSF PIRSF005894 1 104 7.0E-45 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 XFUD_11620 d13a71dbce3341449469ac1472923bc4 104 Gene3D G3DSA:3.40.30.10 6 102 2.5E-27 T 11-10-2018 XFUD_11620 d13a71dbce3341449469ac1472923bc4 104 SUPERFAMILY SSF52833 3 102 5.3E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_10535 a6d54e37e8fdf6c23abf242e032865aa 296 Gene3D G3DSA:3.90.550.10 1 292 2.4E-82 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_10535 a6d54e37e8fdf6c23abf242e032865aa 296 SUPERFAMILY SSF53448 5 280 3.6E-62 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_10535 a6d54e37e8fdf6c23abf242e032865aa 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 267 5.8E-107 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 XFUD_10535 a6d54e37e8fdf6c23abf242e032865aa 296 Pfam PF00483 Nucleotidyl transferase 12 271 8.7E-30 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XFUD_00350 42e002d04c3f50a86d8b0fd2f8a357d5 162 Gene3D G3DSA:3.90.950.20 1 162 4.7E-58 T 11-10-2018 IPR036653 CinA-like, C-terminal XFUD_00350 42e002d04c3f50a86d8b0fd2f8a357d5 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 159 4.2E-47 T 11-10-2018 IPR008136 CinA, C-terminal XFUD_00350 42e002d04c3f50a86d8b0fd2f8a357d5 162 SUPERFAMILY SSF142433 5 160 5.23E-52 T 11-10-2018 IPR036653 CinA-like, C-terminal XFUD_00350 42e002d04c3f50a86d8b0fd2f8a357d5 162 Pfam PF02464 Competence-damaged protein 9 160 8.0E-54 T 11-10-2018 IPR008136 CinA, C-terminal XFUD_06105 f0716069095903df59f007f8f701528c 636 Gene3D G3DSA:3.10.620.30 247 386 2.4E-30 T 11-10-2018 XFUD_06105 f0716069095903df59f007f8f701528c 636 SUPERFAMILY SSF54001 256 365 2.78E-10 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily XFUD_06105 f0716069095903df59f007f8f701528c 636 Pfam PF01841 Transglutaminase-like superfamily 261 335 1.8E-8 T 11-10-2018 IPR002931 Transglutaminase-like XFUD_06105 f0716069095903df59f007f8f701528c 636 Gene3D G3DSA:2.60.40.3140 30 237 2.2E-37 T 11-10-2018 XFUD_06105 f0716069095903df59f007f8f701528c 636 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 47 214 3.1E-36 T 11-10-2018 IPR024618 Domain of unknown function DUF3857 XFUD_00475 c6b8db31e04b5e6b29cfada5af3ba581 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 111 1.5E-25 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR XFUD_00475 c6b8db31e04b5e6b29cfada5af3ba581 118 SUPERFAMILY SSF52833 1 114 6.0E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_00475 c6b8db31e04b5e6b29cfada5af3ba581 118 Pfam PF03960 ArsC family 7 113 2.3E-13 T 11-10-2018 IPR006660 Arsenate reductase-like XFUD_00475 c6b8db31e04b5e6b29cfada5af3ba581 118 Gene3D G3DSA:3.40.30.10 1 115 1.3E-32 T 11-10-2018 XFUD_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 132 151 5.1E-45 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 237 255 5.1E-45 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 422 440 5.1E-45 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 440 454 5.1E-45 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 314 335 5.1E-45 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 454 467 5.1E-45 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 454 471 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 241 254 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 Gene3D G3DSA:3.40.50.10490 90 267 2.3E-159 T 11-10-2018 XFUD_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 Pfam PF00342 Phosphoglucose isomerase 45 495 9.2E-140 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 Gene3D G3DSA:3.40.50.10490 6 463 2.3E-159 T 11-10-2018 XFUD_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 SUPERFAMILY SSF53697 5 486 2.14E-148 T 11-10-2018 XFUD_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 Gene3D G3DSA:1.10.1390.10 464 502 2.9E-11 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_00985 77e53e619fbcf8b0456e5c30b9f3a875 502 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 38 481 36.509 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_11410 c10c55371359ef547521ea0cfc1f66a2 138 Gene3D G3DSA:3.30.370.10 38 131 9.3E-9 T 11-10-2018 IPR035905 Barstar-like superfamily XFUD_11410 c10c55371359ef547521ea0cfc1f66a2 138 SUPERFAMILY SSF52038 39 130 3.01E-22 T 11-10-2018 IPR035905 Barstar-like superfamily XFUD_11410 c10c55371359ef547521ea0cfc1f66a2 138 Pfam PF01337 Barstar (barnase inhibitor) 42 125 1.5E-22 T 11-10-2018 IPR000468 Barstar (barnase inhibitor) XFUD_10135 0e6a978905e0ab40fde031449dc8fd15 264 Gene3D G3DSA:3.30.572.10 1 264 3.6E-128 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFUD_10135 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 7.0E-50 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFUD_10135 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 7.0E-50 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFUD_10135 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 7.0E-50 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFUD_10135 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 7.0E-50 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFUD_10135 0e6a978905e0ab40fde031449dc8fd15 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 7.0E-50 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFUD_10135 0e6a978905e0ab40fde031449dc8fd15 264 SUPERFAMILY SSF55831 2 264 9.03E-127 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFUD_10135 0e6a978905e0ab40fde031449dc8fd15 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.148 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFUD_10135 0e6a978905e0ab40fde031449dc8fd15 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 4.6E-42 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFUD_10135 0e6a978905e0ab40fde031449dc8fd15 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 6.5E-99 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFUD_10135 0e6a978905e0ab40fde031449dc8fd15 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFUD_10135 0e6a978905e0ab40fde031449dc8fd15 264 Pfam PF00303 Thymidylate synthase 2 264 9.7E-121 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 XFUD_05265 52fca1471586ede9d14a9783498c7bde 398 Gene3D G3DSA:3.10.310.10 11 387 4.0E-141 T 11-10-2018 XFUD_05265 52fca1471586ede9d14a9783498c7bde 398 SUPERFAMILY SSF54506 4 182 8.63E-67 T 11-10-2018 XFUD_05265 52fca1471586ede9d14a9783498c7bde 398 SUPERFAMILY SSF54506 189 391 2.04E-70 T 11-10-2018 XFUD_05265 52fca1471586ede9d14a9783498c7bde 398 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 393 6.0E-230 T 11-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 XFUD_05265 52fca1471586ede9d14a9783498c7bde 398 Pfam PF04303 PrpF protein 6 390 3.8E-184 T 11-10-2018 IPR007400 PrpF protein XFUD_05265 52fca1471586ede9d14a9783498c7bde 398 Gene3D G3DSA:3.10.310.10 181 373 4.0E-141 T 11-10-2018 XFUD_00755 8a2ad0e0f1d5b9363171c9dedc9ed45b 337 Pfam PF00535 Glycosyl transferase family 2 7 169 7.4E-25 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XFUD_00755 8a2ad0e0f1d5b9363171c9dedc9ed45b 337 SUPERFAMILY SSF53448 6 260 2.72E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_00755 8a2ad0e0f1d5b9363171c9dedc9ed45b 337 Gene3D G3DSA:3.90.550.10 2 207 2.1E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_07080 b5d6c455de9faf1192c9f9676c27bbd2 370 Pfam PF02498 BRO family, N-terminal domain 14 100 5.8E-21 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_07080 b5d6c455de9faf1192c9f9676c27bbd2 370 Pfam PF02498 BRO family, N-terminal domain 131 218 1.3E-24 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_07080 b5d6c455de9faf1192c9f9676c27bbd2 370 SMART SM01040 13 100 1.4E-32 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_07080 b5d6c455de9faf1192c9f9676c27bbd2 370 SMART SM01040 130 218 5.6E-39 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_04900 d90a9b70ecb39375d2d7370c08e44d2c 111 Pfam PF00237 Ribosomal protein L22p/L17e 6 107 8.2E-32 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 XFUD_04900 d90a9b70ecb39375d2d7370c08e44d2c 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 XFUD_04900 d90a9b70ecb39375d2d7370c08e44d2c 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.5E-39 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04900 d90a9b70ecb39375d2d7370c08e44d2c 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 26.243 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04900 d90a9b70ecb39375d2d7370c08e44d2c 111 Gene3D G3DSA:3.90.470.10 1 111 6.1E-41 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 XFUD_04900 d90a9b70ecb39375d2d7370c08e44d2c 111 SUPERFAMILY SSF54843 1 108 1.05E-38 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 XFUD_12020 c6adcaf15d8e15e517239bbaa96e4501 102 Gene3D G3DSA:1.10.260.40 23 98 3.4E-5 T 11-10-2018 XFUD_12020 c6adcaf15d8e15e517239bbaa96e4501 102 SUPERFAMILY SSF47413 34 96 2.3E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_12020 c6adcaf15d8e15e517239bbaa96e4501 102 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 11 98 3.2E-37 T 11-10-2018 IPR014057 Uncharacterized protein HI1420 XFUD_04845 114c3cafce5c686aeecba8df93166db8 515 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 384 509 8.9E-46 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04845 114c3cafce5c686aeecba8df93166db8 515 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 512 1.1E-246 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04845 114c3cafce5c686aeecba8df93166db8 515 SUPERFAMILY SSF50615 12 96 4.12E-26 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFUD_04845 114c3cafce5c686aeecba8df93166db8 515 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFUD_04845 114c3cafce5c686aeecba8df93166db8 515 Gene3D G3DSA:3.40.50.300 96 384 2.6E-129 T 11-10-2018 XFUD_04845 114c3cafce5c686aeecba8df93166db8 515 Gene3D G3DSA:1.20.150.20 385 515 1.4E-47 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04845 114c3cafce5c686aeecba8df93166db8 515 SUPERFAMILY SSF47917 385 512 1.83E-46 T 11-10-2018 XFUD_04845 114c3cafce5c686aeecba8df93166db8 515 SUPERFAMILY SSF52540 98 383 2.92E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_04845 114c3cafce5c686aeecba8df93166db8 515 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 377 6.4E-73 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFUD_04845 114c3cafce5c686aeecba8df93166db8 515 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 94 1.0E-12 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFUD_04845 114c3cafce5c686aeecba8df93166db8 515 Gene3D G3DSA:2.40.30.20 3 95 1.9E-30 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 XFUD_04845 114c3cafce5c686aeecba8df93166db8 515 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 514 49.393 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_06310 cef7780882726d18002233294e2a1e18 683 Gene3D G3DSA:2.40.170.20 188 683 1.3E-63 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XFUD_06310 cef7780882726d18002233294e2a1e18 683 SUPERFAMILY SSF56935 40 683 3.46E-90 T 11-10-2018 XFUD_06310 cef7780882726d18002233294e2a1e18 683 Gene3D G3DSA:2.170.130.10 56 174 7.4E-15 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFUD_06310 cef7780882726d18002233294e2a1e18 683 Pfam PF00593 TonB dependent receptor 246 681 2.7E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFUD_06310 cef7780882726d18002233294e2a1e18 683 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 165 1.6E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFUD_01405 b6d7e9af420ccbd1db5edab90d1d3d1f 231 Gene3D G3DSA:3.40.50.2300 1 121 4.2E-34 T 11-10-2018 XFUD_01405 b6d7e9af420ccbd1db5edab90d1d3d1f 231 Pfam PF00072 Response regulator receiver domain 4 111 3.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_01405 b6d7e9af420ccbd1db5edab90d1d3d1f 231 SMART SM00862 145 218 4.7E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFUD_01405 b6d7e9af420ccbd1db5edab90d1d3d1f 231 SUPERFAMILY SSF52172 1 179 3.56E-37 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_01405 b6d7e9af420ccbd1db5edab90d1d3d1f 231 SMART SM00448 1 112 7.8E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_01405 b6d7e9af420ccbd1db5edab90d1d3d1f 231 Gene3D G3DSA:1.10.10.10 122 228 7.8E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_01405 b6d7e9af420ccbd1db5edab90d1d3d1f 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 217 8.5E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 XFUD_11635 76444f15149b26bcc5b1fd50a084fcd2 89 Gene3D G3DSA:2.20.25.10 8 89 3.3E-31 T 11-10-2018 XFUD_11635 76444f15149b26bcc5b1fd50a084fcd2 89 Pfam PF03966 Trm112p-like protein 2 68 3.7E-9 T 11-10-2018 IPR005651 Trm112-like XFUD_11635 76444f15149b26bcc5b1fd50a084fcd2 89 SUPERFAMILY SSF158997 1 78 7.85E-7 T 11-10-2018 XFUD_03470 c92f01833d5140c338a3115d2f4def3c 552 SUPERFAMILY SSF53187 23 526 1.08E-62 T 11-10-2018 XFUD_03470 c92f01833d5140c338a3115d2f4def3c 552 Pfam PF02225 PA domain 133 218 1.9E-7 T 11-10-2018 IPR003137 PA domain XFUD_03470 c92f01833d5140c338a3115d2f4def3c 552 Pfam PF04389 Peptidase family M28 300 515 5.4E-48 T 11-10-2018 IPR007484 Peptidase M28 XFUD_03470 c92f01833d5140c338a3115d2f4def3c 552 SUPERFAMILY SSF52025 133 216 6.02E-8 T 11-10-2018 XFUD_03470 c92f01833d5140c338a3115d2f4def3c 552 Gene3D G3DSA:3.40.630.10 248 526 1.2E-49 T 11-10-2018 XFUD_01975 36a2169a9bbf3f04c0ff19d9a9d8cfa1 1521 Pfam PF05567 Neisseria PilC beta-propeller domain 991 1323 4.4E-63 T 11-10-2018 IPR008707 PilC beta-propeller domain XFUD_01975 36a2169a9bbf3f04c0ff19d9a9d8cfa1 1521 SUPERFAMILY SSF50998 1034 1302 5.49E-7 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily XFUD_06020 fb6cae70e8bdf43bf26cbec2e345a990 203 SUPERFAMILY SSF52540 20 197 4.31E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_06020 fb6cae70e8bdf43bf26cbec2e345a990 203 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 193 1.6E-72 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 XFUD_06020 fb6cae70e8bdf43bf26cbec2e345a990 203 Pfam PF01926 50S ribosome-binding GTPase 27 145 1.6E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 XFUD_06020 fb6cae70e8bdf43bf26cbec2e345a990 203 Gene3D G3DSA:3.40.50.300 4 199 1.4E-52 T 11-10-2018 XFUD_06020 fb6cae70e8bdf43bf26cbec2e345a990 203 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 197 28.011 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 XFUD_00780 60b54a132b3c739ce2156509557292c1 368 Gene3D G3DSA:3.30.70.1400 51 138 3.8E-84 T 11-10-2018 XFUD_00780 60b54a132b3c739ce2156509557292c1 368 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 44.759 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 XFUD_00780 60b54a132b3c739ce2156509557292c1 368 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 4.8E-132 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 XFUD_00780 60b54a132b3c739ce2156509557292c1 368 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 259 4.9E-88 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain XFUD_00780 60b54a132b3c739ce2156509557292c1 368 Gene3D G3DSA:3.30.1360.120 7 236 3.8E-84 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 XFUD_00780 60b54a132b3c739ce2156509557292c1 368 SUPERFAMILY SSF101790 274 362 3.11E-23 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal XFUD_00780 60b54a132b3c739ce2156509557292c1 368 Gene3D G3DSA:2.40.30.110 282 367 8.3E-28 T 11-10-2018 XFUD_00780 60b54a132b3c739ce2156509557292c1 368 Gene3D G3DSA:4.10.1250.10 237 279 8.2E-21 T 11-10-2018 XFUD_00780 60b54a132b3c739ce2156509557292c1 368 SUPERFAMILY SSF103025 2 282 4.49E-92 T 11-10-2018 XFUD_00780 60b54a132b3c739ce2156509557292c1 368 PIRSF PIRSF006487 1 366 2.3E-87 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 XFUD_00780 60b54a132b3c739ce2156509557292c1 368 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 267 352 1.7E-18 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 XFUD_00925 d33d5bc9611278e4996ad5436581817e 608 Pfam PF05960 Bacterial protein of unknown function (DUF885) 62 593 1.4E-159 T 11-10-2018 IPR010281 Protein of unknown function DUF885 XFUD_11425 7a36eb46b27251d6afb146268af19d79 73 PIRSF PIRSF002599 4 73 1.8E-21 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 XFUD_11425 7a36eb46b27251d6afb146268af19d79 73 SMART SM00357 10 73 1.1E-25 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 XFUD_11425 7a36eb46b27251d6afb146268af19d79 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 22 40 - T 11-10-2018 IPR019844 Cold-shock conserved site XFUD_11425 7a36eb46b27251d6afb146268af19d79 73 Pfam PF00313 'Cold-shock' DNA-binding domain 11 72 2.0E-27 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFUD_11425 7a36eb46b27251d6afb146268af19d79 73 PRINTS PR00050 Cold shock protein signature 11 26 1.2E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFUD_11425 7a36eb46b27251d6afb146268af19d79 73 PRINTS PR00050 Cold shock protein signature 46 64 1.2E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFUD_11425 7a36eb46b27251d6afb146268af19d79 73 PRINTS PR00050 Cold shock protein signature 31 40 1.2E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFUD_11425 7a36eb46b27251d6afb146268af19d79 73 Gene3D G3DSA:2.40.50.140 8 72 1.0E-26 T 11-10-2018 XFUD_11425 7a36eb46b27251d6afb146268af19d79 73 SUPERFAMILY SSF50249 8 72 1.64E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_05820 2899869c51ce8610383c4d1d910f47bd 491 Gene3D G3DSA:3.40.50.1820 153 368 4.7E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_05820 2899869c51ce8610383c4d1d910f47bd 491 Pfam PF10142 PhoPQ-activated pathogenicity-related protein 42 415 1.3E-138 T 11-10-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type XFUD_05820 2899869c51ce8610383c4d1d910f47bd 491 SUPERFAMILY SSF53474 203 367 2.94E-10 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_05820 2899869c51ce8610383c4d1d910f47bd 491 PIRSF PIRSF014728 1 491 3.6E-254 T 11-10-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type XFUD_10580 b4d1fd927bded3f6340a977cd594be2c 346 Gene3D G3DSA:3.75.10.10 5 346 3.0E-113 T 11-10-2018 XFUD_10580 b4d1fd927bded3f6340a977cd594be2c 346 SUPERFAMILY SSF55909 4 341 1.41E-112 T 11-10-2018 XFUD_10580 b4d1fd927bded3f6340a977cd594be2c 346 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 7 340 1.8E-107 T 11-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 2.4E-63 T 11-10-2018 XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 245 1.5E-97 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.6E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.6E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.6E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 Gene3D G3DSA:3.40.50.720 1 247 2.1E-80 T 11-10-2018 XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 185 9.3E-4 T 11-10-2018 XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 9.4E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 9.4E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.4E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 9.4E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 9.4E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 9.4E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 XFUD_02795 87fe5263807662f52cbd11cd53e12d20 247 SUPERFAMILY SSF51735 6 246 3.16E-81 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_06835 aa20b2c459b1cab0e377177a2801e52c 426 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 93 410 1.0E-93 T 11-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 XFUD_06835 aa20b2c459b1cab0e377177a2801e52c 426 Gene3D G3DSA:1.20.1250.20 229 417 7.5E-59 T 11-10-2018 XFUD_06835 aa20b2c459b1cab0e377177a2801e52c 426 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 13 411 4.7E-86 T 11-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 XFUD_06835 aa20b2c459b1cab0e377177a2801e52c 426 Pfam PF07690 Major Facilitator Superfamily 19 372 2.2E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XFUD_06835 aa20b2c459b1cab0e377177a2801e52c 426 SUPERFAMILY SSF103473 11 411 1.15E-39 T 11-10-2018 IPR036259 MFS transporter superfamily XFUD_06835 aa20b2c459b1cab0e377177a2801e52c 426 Gene3D G3DSA:1.20.1250.20 8 227 3.1E-58 T 11-10-2018 XFUD_00905 cd14135b7fec982aa97de47db88281a3 240 Pfam PF12710 haloacid dehalogenase-like hydrolase 15 198 7.5E-24 T 11-10-2018 XFUD_00905 cd14135b7fec982aa97de47db88281a3 240 Gene3D G3DSA:3.40.50.1000 15 215 3.1E-23 T 11-10-2018 IPR023214 HAD superfamily XFUD_00905 cd14135b7fec982aa97de47db88281a3 240 SUPERFAMILY SSF56784 14 217 1.38E-18 T 11-10-2018 IPR036412 HAD-like superfamily XFUD_00905 cd14135b7fec982aa97de47db88281a3 240 Gene3D G3DSA:1.20.1440.100 26 103 3.1E-23 T 11-10-2018 XFUD_10190 c16ea6d5f37f8a028ab469551a995ec3 130 Pfam PF04355 SmpA / OmlA family 29 99 4.5E-22 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 XFUD_10190 c16ea6d5f37f8a028ab469551a995ec3 130 Gene3D G3DSA:3.30.1450.10 35 111 4.2E-28 T 11-10-2018 IPR037873 BamE-like XFUD_10190 c16ea6d5f37f8a028ab469551a995ec3 130 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 118 27.847 T 11-10-2018 IPR026592 Outer membrane protein assembly factor BamE XFUD_10550 e9508039b03a5815a0bf8a5a33bf4bae 392 SMART SM00028 219 252 76.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_10550 e9508039b03a5815a0bf8a5a33bf4bae 392 SMART SM00028 112 145 86.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_10550 e9508039b03a5815a0bf8a5a33bf4bae 392 SMART SM00028 40 73 37.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_10550 e9508039b03a5815a0bf8a5a33bf4bae 392 SMART SM00028 185 218 170.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 XFUD_10550 e9508039b03a5815a0bf8a5a33bf4bae 392 Gene3D G3DSA:1.25.40.10 38 174 4.4E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_10550 e9508039b03a5815a0bf8a5a33bf4bae 392 SUPERFAMILY SSF81901 44 252 2.41E-17 T 11-10-2018 XFUD_10550 e9508039b03a5815a0bf8a5a33bf4bae 392 Gene3D G3DSA:1.25.40.10 175 333 7.6E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_10550 e9508039b03a5815a0bf8a5a33bf4bae 392 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 9 390 34.646 T 11-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 XFUD_10550 e9508039b03a5815a0bf8a5a33bf4bae 392 Pfam PF13432 Tetratricopeptide repeat 190 250 0.011 T 11-10-2018 XFUD_10550 e9508039b03a5815a0bf8a5a33bf4bae 392 Pfam PF13432 Tetratricopeptide repeat 116 171 0.004 T 11-10-2018 XFUD_01770 7747b0f136bcab347e87eeb0b0311af0 1242 Gene3D G3DSA:3.40.50.300 287 491 1.1E-27 T 11-10-2018 XFUD_01770 7747b0f136bcab347e87eeb0b0311af0 1242 SUPERFAMILY SSF52980 943 1239 2.9E-54 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 XFUD_01770 7747b0f136bcab347e87eeb0b0311af0 1242 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1128 1183 7.2E-5 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type XFUD_01770 7747b0f136bcab347e87eeb0b0311af0 1242 Pfam PF00580 UvrD/REP helicase N-terminal domain 13 486 7.5E-53 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 XFUD_01770 7747b0f136bcab347e87eeb0b0311af0 1242 Gene3D G3DSA:3.90.320.10 932 1241 6.8E-66 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal XFUD_01770 7747b0f136bcab347e87eeb0b0311af0 1242 Gene3D G3DSA:3.40.50.300 497 887 5.9E-96 T 11-10-2018 XFUD_01770 7747b0f136bcab347e87eeb0b0311af0 1242 Pfam PF13361 UvrD-like helicase C-terminal domain 784 880 3.5E-15 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XFUD_01770 7747b0f136bcab347e87eeb0b0311af0 1242 SUPERFAMILY SSF52540 11 882 2.72E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01770 7747b0f136bcab347e87eeb0b0311af0 1242 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 4 1238 17.953 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 XFUD_01770 7747b0f136bcab347e87eeb0b0311af0 1242 Pfam PF13361 UvrD-like helicase C-terminal domain 609 688 1.0E-6 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 XFUD_01770 7747b0f136bcab347e87eeb0b0311af0 1242 Gene3D G3DSA:1.10.486.10 640 783 5.9E-96 T 11-10-2018 XFUD_02925 9b5a1065f23ada3983a78b775c8806ce 74 Gene3D G3DSA:1.10.260.40 8 74 1.7E-6 T 11-10-2018 XFUD_04760 176a94c5774c5f2d24a984a257b92b06 189 PIRSF PIRSF006305 1 189 7.5E-46 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 XFUD_04760 176a94c5774c5f2d24a984a257b92b06 189 SUPERFAMILY SSF52972 1 184 2.03E-53 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XFUD_04760 176a94c5774c5f2d24a984a257b92b06 189 Pfam PF02545 Maf-like protein 2 185 2.8E-49 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 XFUD_04760 176a94c5774c5f2d24a984a257b92b06 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 183 1.4E-47 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 XFUD_04760 176a94c5774c5f2d24a984a257b92b06 189 Hamap MF_00528 Septum formation protein Maf [maf]. 1 189 29.105 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 XFUD_04760 176a94c5774c5f2d24a984a257b92b06 189 Gene3D G3DSA:3.90.950.10 1 189 9.9E-59 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like XFUD_09960 5ae9d3517edfc6b9294b258d4a44ac71 92 SMART SM00990 5 85 1.4E-17 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFUD_09960 5ae9d3517edfc6b9294b258d4a44ac71 92 Gene3D G3DSA:3.40.1350.10 5 92 3.4E-30 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XFUD_09960 5ae9d3517edfc6b9294b258d4a44ac71 92 Pfam PF08774 VRR-NUC domain 31 82 5.2E-6 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFUD_02855 5ae9d3517edfc6b9294b258d4a44ac71 92 SMART SM00990 5 85 1.4E-17 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFUD_02855 5ae9d3517edfc6b9294b258d4a44ac71 92 Gene3D G3DSA:3.40.1350.10 5 92 3.4E-30 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XFUD_02855 5ae9d3517edfc6b9294b258d4a44ac71 92 Pfam PF08774 VRR-NUC domain 31 82 5.2E-6 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFUD_11020 5ae9d3517edfc6b9294b258d4a44ac71 92 SMART SM00990 5 85 1.4E-17 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFUD_11020 5ae9d3517edfc6b9294b258d4a44ac71 92 Gene3D G3DSA:3.40.1350.10 5 92 3.4E-30 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 XFUD_11020 5ae9d3517edfc6b9294b258d4a44ac71 92 Pfam PF08774 VRR-NUC domain 31 82 5.2E-6 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 XFUD_06365 5c944068bc778e0b5e0dbfded994244a 385 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 9 355 1.4E-107 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 XFUD_06365 5c944068bc778e0b5e0dbfded994244a 385 SUPERFAMILY SSF102114 5 383 3.27E-104 T 11-10-2018 XFUD_06365 5c944068bc778e0b5e0dbfded994244a 385 Pfam PF06969 HemN C-terminal domain 316 372 1.2E-6 T 11-10-2018 IPR010723 HemN, C-terminal XFUD_06365 5c944068bc778e0b5e0dbfded994244a 385 SMART SM00729 8 225 1.3E-50 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 XFUD_06365 5c944068bc778e0b5e0dbfded994244a 385 Pfam PF04055 Radical SAM superfamily 13 179 4.7E-19 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 XFUD_06365 5c944068bc778e0b5e0dbfded994244a 385 Gene3D G3DSA:3.80.30.20 4 297 3.7E-98 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe XFUD_04085 3e100f529004bc88e8f5995900000104 154 SUPERFAMILY SSF52121 4 153 9.16E-53 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFUD_04085 3e100f529004bc88e8f5995900000104 154 Gene3D G3DSA:3.40.50.960 1 154 4.0E-55 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFUD_04085 3e100f529004bc88e8f5995900000104 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 27.506 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFUD_04085 3e100f529004bc88e8f5995900000104 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 149 2.6E-40 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFUD_04085 3e100f529004bc88e8f5995900000104 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 1.5E-49 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 XFUD_01960 52bb2c2fb15d5f12c487691402fdabab 160 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 16 138 1.7E-39 T 11-10-2018 IPR013362 Pilus modification type IV, PilV XFUD_01960 52bb2c2fb15d5f12c487691402fdabab 160 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 36 6.3E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_02455 1b57d86b361e61229e56d9f6d822b60c 385 Pfam PF01594 AI-2E family transporter 25 348 3.0E-53 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like XFUD_12460 b6eac10d3617e2012fb2d9fe0a8af54e 401 SUPERFAMILY SSF110849 55 145 1.34E-21 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily XFUD_12460 b6eac10d3617e2012fb2d9fe0a8af54e 401 Pfam PF02195 ParB-like nuclease domain 55 143 8.9E-21 T 11-10-2018 IPR003115 ParB/Sulfiredoxin XFUD_12460 b6eac10d3617e2012fb2d9fe0a8af54e 401 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 55 206 2.2E-36 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 XFUD_12460 b6eac10d3617e2012fb2d9fe0a8af54e 401 Gene3D G3DSA:3.90.1530.30 65 129 1.2E-23 T 11-10-2018 XFUD_12460 b6eac10d3617e2012fb2d9fe0a8af54e 401 SUPERFAMILY SSF109709 138 204 3.27E-13 T 11-10-2018 XFUD_12460 b6eac10d3617e2012fb2d9fe0a8af54e 401 SMART SM00470 53 143 1.4E-27 T 11-10-2018 IPR003115 ParB/Sulfiredoxin XFUD_12460 b6eac10d3617e2012fb2d9fe0a8af54e 401 Pfam PF08535 KorB domain 176 233 4.1E-5 T 11-10-2018 IPR013741 Repressor KorB domain XFUD_12460 b6eac10d3617e2012fb2d9fe0a8af54e 401 Gene3D G3DSA:1.10.10.2830 130 244 4.3E-13 T 11-10-2018 XFUD_11715 37169fc187fec375144f373c6d31f1f3 228 SMART SM00382 29 216 1.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_11715 37169fc187fec375144f373c6d31f1f3 228 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_11715 37169fc187fec375144f373c6d31f1f3 228 SUPERFAMILY SSF52540 3 225 1.62E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11715 37169fc187fec375144f373c6d31f1f3 228 Pfam PF00005 ABC transporter 20 167 4.6E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_11715 37169fc187fec375144f373c6d31f1f3 228 Gene3D G3DSA:3.40.50.300 2 228 4.5E-64 T 11-10-2018 XFUD_03155 e6053cb30386909aa345a2496dccf05e 118 SMART SM00422 19 89 2.3E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XFUD_03155 e6053cb30386909aa345a2496dccf05e 118 SUPERFAMILY SSF46955 17 114 5.04E-17 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFUD_03155 e6053cb30386909aa345a2496dccf05e 118 Pfam PF13411 MerR HTH family regulatory protein 19 87 1.0E-21 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 XFUD_03155 e6053cb30386909aa345a2496dccf05e 118 Gene3D G3DSA:1.10.1660.10 13 88 9.8E-21 T 11-10-2018 XFUD_07930 ed9829387356fc9ee72481ace53b4c28 283 SUPERFAMILY SSF53328 88 283 2.49E-60 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFUD_07930 ed9829387356fc9ee72481ace53b4c28 283 Gene3D G3DSA:3.40.50.170 87 282 4.9E-69 T 11-10-2018 XFUD_07930 ed9829387356fc9ee72481ace53b4c28 283 Gene3D G3DSA:3.30.70.260 1 85 7.7E-26 T 11-10-2018 XFUD_07930 ed9829387356fc9ee72481ace53b4c28 283 SUPERFAMILY SSF55021 2 84 2.96E-18 T 11-10-2018 XFUD_07930 ed9829387356fc9ee72481ace53b4c28 283 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 282 1.4E-100 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFUD_07930 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 8.8E-52 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFUD_07930 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 8.8E-52 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFUD_07930 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 8.8E-52 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFUD_07930 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 8.8E-52 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFUD_07930 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 8.8E-52 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFUD_07930 ed9829387356fc9ee72481ace53b4c28 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 8.8E-52 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFUD_07930 ed9829387356fc9ee72481ace53b4c28 283 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 282 46.85 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 XFUD_07930 ed9829387356fc9ee72481ace53b4c28 283 Pfam PF00551 Formyl transferase 88 264 5.0E-38 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFUD_07930 ed9829387356fc9ee72481ace53b4c28 283 PIRSF PIRSF036480 2 283 2.3E-107 T 11-10-2018 XFUD_09760 f47ff01d453fc69e7f26c381019f005a 206 SUPERFAMILY SSF88946 11 110 9.73E-27 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 XFUD_09760 f47ff01d453fc69e7f26c381019f005a 206 Gene3D G3DSA:1.10.10.10 126 194 9.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_09760 f47ff01d453fc69e7f26c381019f005a 206 Gene3D G3DSA:1.10.1740.10 3 125 5.5E-35 T 11-10-2018 XFUD_09760 f47ff01d453fc69e7f26c381019f005a 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 186 8.1E-30 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 XFUD_09760 f47ff01d453fc69e7f26c381019f005a 206 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 6 194 2.0E-91 T 11-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XFUD_09760 f47ff01d453fc69e7f26c381019f005a 206 Pfam PF08281 Sigma-70, region 4 134 185 1.5E-17 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 XFUD_09760 f47ff01d453fc69e7f26c381019f005a 206 SUPERFAMILY SSF88659 127 186 8.29E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like XFUD_09760 f47ff01d453fc69e7f26c381019f005a 206 Pfam PF04542 Sigma-70 region 2 29 96 2.3E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 XFUD_07370 2e988d09c2bddf8a5aee52df16b8f212 96 Pfam PF13560 Helix-turn-helix domain 24 83 5.3E-12 T 11-10-2018 XFUD_07370 2e988d09c2bddf8a5aee52df16b8f212 96 SUPERFAMILY SSF47413 23 88 2.17E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_07370 2e988d09c2bddf8a5aee52df16b8f212 96 SMART SM00530 28 83 4.8E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_07370 2e988d09c2bddf8a5aee52df16b8f212 96 Gene3D G3DSA:1.10.260.40 23 95 4.6E-16 T 11-10-2018 XFUD_06675 fbda1bc32aa4d2125af08274aacff09f 281 Pfam PF04233 Phage Mu protein F like protein 167 272 1.7E-28 T 11-10-2018 IPR006528 Phage head morphogenesis domain XFUD_06675 fbda1bc32aa4d2125af08274aacff09f 281 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 173 275 1.6E-21 T 11-10-2018 IPR006528 Phage head morphogenesis domain XFUD_07170 fbda1bc32aa4d2125af08274aacff09f 281 Pfam PF04233 Phage Mu protein F like protein 167 272 1.7E-28 T 11-10-2018 IPR006528 Phage head morphogenesis domain XFUD_07170 fbda1bc32aa4d2125af08274aacff09f 281 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 173 275 1.6E-21 T 11-10-2018 IPR006528 Phage head morphogenesis domain XFUD_05460 521469ac6370bc3f3676eb696889ea60 180 SMART SM00463 94 178 1.9E-17 T 11-10-2018 IPR002625 Smr domain XFUD_05460 521469ac6370bc3f3676eb696889ea60 180 SUPERFAMILY SSF160443 95 177 7.32E-17 T 11-10-2018 IPR036063 Smr domain superfamily XFUD_05460 521469ac6370bc3f3676eb696889ea60 180 Pfam PF01713 Smr domain 97 177 9.8E-21 T 11-10-2018 IPR002625 Smr domain XFUD_05460 521469ac6370bc3f3676eb696889ea60 180 Gene3D G3DSA:3.30.1370.110 49 180 1.8E-37 T 11-10-2018 XFUD_04780 b073d3a463bfde4544b393befc83f05a 179 Gene3D G3DSA:1.10.60.30 102 174 2.7E-24 T 11-10-2018 XFUD_04780 b073d3a463bfde4544b393befc83f05a 179 Pfam PF04751 Protein of unknown function (DUF615) 14 167 1.1E-43 T 11-10-2018 IPR006839 Ribosome-associated, YjgA XFUD_04780 b073d3a463bfde4544b393befc83f05a 179 SUPERFAMILY SSF158710 28 171 6.15E-42 T 11-10-2018 IPR023153 PSPTO4464-like domain superfamily XFUD_04780 b073d3a463bfde4544b393befc83f05a 179 Gene3D G3DSA:1.10.60.30 24 98 1.4E-20 T 11-10-2018 XFUD_04780 b073d3a463bfde4544b393befc83f05a 179 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 3 171 22.078 T 11-10-2018 IPR006839 Ribosome-associated, YjgA XFUD_04780 b073d3a463bfde4544b393befc83f05a 179 PIRSF PIRSF016183 1 175 3.5E-62 T 11-10-2018 IPR006839 Ribosome-associated, YjgA XFUD_08250 162b7eeb2c34ce4c7650d04666d578c0 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 152 2.4E-47 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFUD_08250 162b7eeb2c34ce4c7650d04666d578c0 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 85 101 1.7E-37 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFUD_08250 162b7eeb2c34ce4c7650d04666d578c0 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 1.7E-37 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFUD_08250 162b7eeb2c34ce4c7650d04666d578c0 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 63 79 1.7E-37 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFUD_08250 162b7eeb2c34ce4c7650d04666d578c0 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.7E-37 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFUD_08250 162b7eeb2c34ce4c7650d04666d578c0 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 109 128 1.7E-37 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFUD_08250 162b7eeb2c34ce4c7650d04666d578c0 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 157 5.0E-51 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFUD_08250 162b7eeb2c34ce4c7650d04666d578c0 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 115 149 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 XFUD_08250 162b7eeb2c34ce4c7650d04666d578c0 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 155 42.632 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 XFUD_08250 162b7eeb2c34ce4c7650d04666d578c0 173 Gene3D G3DSA:3.30.420.10 4 160 4.0E-42 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFUD_08250 162b7eeb2c34ce4c7650d04666d578c0 173 SUPERFAMILY SSF53098 3 156 4.86E-47 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFUD_08780 1688c813cd5aad6bd240bcf35a755ed0 210 Pfam PF03692 Putative zinc- or iron-chelating domain 73 148 5.4E-10 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein XFUD_11985 2f7be6597cebb9fdada54dd02f96ad2a 253 Pfam PF12811 Bax inhibitor 1 like 25 251 1.7E-79 T 11-10-2018 IPR010539 Protein of unknown function UCP009160 XFUD_11985 2f7be6597cebb9fdada54dd02f96ad2a 253 PIRSF PIRSF009160 1 253 4.0E-102 T 11-10-2018 IPR010539 Protein of unknown function UCP009160 XFUD_10600 aa19ef11e60898a15d5d50f9ed246d2d 278 Gene3D G3DSA:1.10.3720.10 4 269 2.2E-66 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_10600 aa19ef11e60898a15d5d50f9ed246d2d 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 267 6.7E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFUD_10600 aa19ef11e60898a15d5d50f9ed246d2d 278 SUPERFAMILY SSF161098 8 278 4.8E-72 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_07655 85f38e5a19c7a1f918a975f6ca740475 117 Gene3D G3DSA:3.40.50.150 11 116 6.1E-25 T 11-10-2018 XFUD_07655 85f38e5a19c7a1f918a975f6ca740475 117 SUPERFAMILY SSF53335 19 115 1.33E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_07655 85f38e5a19c7a1f918a975f6ca740475 117 Pfam PF00145 C-5 cytosine-specific DNA methylase 21 114 4.9E-18 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 XFUD_07655 85f38e5a19c7a1f918a975f6ca740475 117 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 83 95 - T 11-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 XFUD_03560 b7254ae1e8b89646a351828de32e58cc 790 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 42 766 1.0E-194 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative XFUD_03560 b7254ae1e8b89646a351828de32e58cc 790 Gene3D G3DSA:2.70.98.10 49 385 4.6E-238 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 XFUD_03560 b7254ae1e8b89646a351828de32e58cc 790 Gene3D G3DSA:3.30.2080.10 332 766 4.6E-238 T 11-10-2018 XFUD_03560 b7254ae1e8b89646a351828de32e58cc 790 Gene3D G3DSA:1.20.1050.60 386 475 4.6E-238 T 11-10-2018 XFUD_03560 b7254ae1e8b89646a351828de32e58cc 790 SUPERFAMILY SSF48208 299 760 5.78E-25 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 XFUD_03560 b7254ae1e8b89646a351828de32e58cc 790 Gene3D G3DSA:1.20.1610.10 476 638 4.6E-238 T 11-10-2018 XFUD_03560 b7254ae1e8b89646a351828de32e58cc 790 Pfam PF07971 Glycosyl hydrolase family 92 274 762 9.7E-163 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 XFUD_01375 4df1c7148f6c71efb3a6741e1a8b4da8 713 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 708 3.2E-230 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01375 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 88 113 2.0E-45 T 11-10-2018 XFUD_01375 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 253 274 2.0E-45 T 11-10-2018 XFUD_01375 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 452 471 2.0E-45 T 11-10-2018 XFUD_01375 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 275 301 2.0E-45 T 11-10-2018 XFUD_01375 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 343 355 2.0E-45 T 11-10-2018 XFUD_01375 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 511 532 1.7E-10 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XFUD_01375 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 386 408 1.7E-10 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XFUD_01375 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 90 110 1.7E-10 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XFUD_01375 4df1c7148f6c71efb3a6741e1a8b4da8 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 64 88 1.7E-10 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 XFUD_01375 4df1c7148f6c71efb3a6741e1a8b4da8 713 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 127 4.7E-25 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01375 4df1c7148f6c71efb3a6741e1a8b4da8 713 Pfam PF00361 Proton-conducting membrane transporter 139 434 7.3E-86 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_05220 d7b98024dc76002f3a5604b076e8d1fe 1273 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 944 1272 1.4E-53 T 11-10-2018 IPR007452 Translocation and assembly module TamB XFUD_02715 40d47f4eb913073f36afcb5b79ad110b 159 Gene3D G3DSA:3.10.50.40 3 153 1.2E-49 T 11-10-2018 XFUD_02715 40d47f4eb913073f36afcb5b79ad110b 159 Gene3D G3DSA:2.40.10.330 71 120 1.2E-49 T 11-10-2018 XFUD_02715 40d47f4eb913073f36afcb5b79ad110b 159 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 135 1.2E-9 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain XFUD_02715 40d47f4eb913073f36afcb5b79ad110b 159 SUPERFAMILY SSF54534 2 139 1.36E-33 T 11-10-2018 XFUD_09420 bdca6f50cd56843cbb60be5750390619 202 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 180 23.307 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 XFUD_09420 bdca6f50cd56843cbb60be5750390619 202 Gene3D G3DSA:3.30.160.150 39 187 2.0E-28 T 11-10-2018 XFUD_00390 21958886c4e34a915988112374615a6b 213 Gene3D G3DSA:3.40.50.150 28 211 6.8E-52 T 11-10-2018 XFUD_00390 21958886c4e34a915988112374615a6b 213 Pfam PF01728 FtsJ-like methyltransferase 29 203 2.8E-49 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 XFUD_00390 21958886c4e34a915988112374615a6b 213 SUPERFAMILY SSF53335 3 204 1.89E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_00390 21958886c4e34a915988112374615a6b 213 PIRSF PIRSF005461 1 212 2.1E-70 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 XFUD_00390 21958886c4e34a915988112374615a6b 213 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 205 26.573 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 XFUD_02975 8d0eac71b5852d5c9c29bd745cf8254a 164 Gene3D G3DSA:1.10.530.40 3 157 1.0E-48 T 11-10-2018 XFUD_02975 8d0eac71b5852d5c9c29bd745cf8254a 164 Pfam PF00959 Phage lysozyme 30 137 6.9E-19 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XFUD_02975 8d0eac71b5852d5c9c29bd745cf8254a 164 SUPERFAMILY SSF53955 5 148 2.4E-47 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_10890 8d0eac71b5852d5c9c29bd745cf8254a 164 Gene3D G3DSA:1.10.530.40 3 157 1.0E-48 T 11-10-2018 XFUD_10890 8d0eac71b5852d5c9c29bd745cf8254a 164 Pfam PF00959 Phage lysozyme 30 137 6.9E-19 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 XFUD_10890 8d0eac71b5852d5c9c29bd745cf8254a 164 SUPERFAMILY SSF53955 5 148 2.4E-47 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_03640 30488d22357dd7410731ea557238985e 290 Pfam PF01551 Peptidase family M23 167 265 1.5E-24 T 11-10-2018 IPR016047 Peptidase M23 XFUD_03640 30488d22357dd7410731ea557238985e 290 Gene3D G3DSA:2.70.70.10 140 275 5.6E-34 T 11-10-2018 IPR011055 Duplicated hybrid motif XFUD_03640 30488d22357dd7410731ea557238985e 290 SUPERFAMILY SSF51261 142 266 1.41E-28 T 11-10-2018 IPR011055 Duplicated hybrid motif XFUD_08775 739a51d5619e620d5d67d9172f69839c 323 Pfam PF13662 Toprim domain 172 244 1.3E-9 T 11-10-2018 IPR006171 TOPRIM domain XFUD_08775 739a51d5619e620d5d67d9172f69839c 323 SMART SM00493 171 249 3.2E-4 T 11-10-2018 IPR006171 TOPRIM domain XFUD_08575 dfad5c41be08fa86a17eaaced70e20fd 700 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 13 679 6.0E-185 T 11-10-2018 IPR010019 Integral membrane protein, YccS XFUD_08575 dfad5c41be08fa86a17eaaced70e20fd 700 Pfam PF12805 FUSC-like inner membrane protein yccS 37 319 1.0E-96 T 11-10-2018 IPR032692 Integral membrane protein YccS, N-terminal XFUD_08575 dfad5c41be08fa86a17eaaced70e20fd 700 Pfam PF13515 Fusaric acid resistance protein-like 376 496 1.4E-19 T 11-10-2018 XFUD_08575 dfad5c41be08fa86a17eaaced70e20fd 700 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 2 679 3.0E-196 T 11-10-2018 IPR010020 Integral membrane protein, YccS/YhfK XFUD_03895 4dfbd9812d7dc780a365b5e122870a2c 420 SUPERFAMILY SSF81648 294 409 5.76E-26 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 XFUD_03895 4dfbd9812d7dc780a365b5e122870a2c 420 PIRSF PIRSF038885 8 419 5.7E-140 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 XFUD_03895 4dfbd9812d7dc780a365b5e122870a2c 420 SUPERFAMILY SSF81342 24 293 6.44E-87 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 XFUD_03895 4dfbd9812d7dc780a365b5e122870a2c 420 Pfam PF00033 Cytochrome b/b6/petB 32 219 1.8E-66 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 XFUD_03895 4dfbd9812d7dc780a365b5e122870a2c 420 Gene3D G3DSA:1.20.810.10 6 419 1.5E-133 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 XFUD_03895 4dfbd9812d7dc780a365b5e122870a2c 420 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 291 394 4.3E-33 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 XFUD_09495 8bee44b37fa2920d8904d4255dce42b3 127 Pfam PF04591 Protein of unknown function, DUF596 56 118 3.2E-21 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFUD_09495 8bee44b37fa2920d8904d4255dce42b3 127 Gene3D G3DSA:1.10.3510.10 3 126 3.7E-13 T 11-10-2018 IPR023138 NMB0513-like superfamily XFUD_09495 8bee44b37fa2920d8904d4255dce42b3 127 SUPERFAMILY SSF160472 1 119 7.32E-37 T 11-10-2018 IPR023138 NMB0513-like superfamily XFUD_08410 3aeffe671ac140da5ea6e441635a5e1e 164 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 36 159 9.0E-33 T 11-10-2018 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 XFUD_08410 3aeffe671ac140da5ea6e441635a5e1e 164 SUPERFAMILY SSF54427 35 158 6.92E-29 T 11-10-2018 IPR032710 NTF2-like domain superfamily XFUD_08410 3aeffe671ac140da5ea6e441635a5e1e 164 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 36 159 1.2E-26 T 11-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 XFUD_08410 3aeffe671ac140da5ea6e441635a5e1e 164 Gene3D G3DSA:3.10.450.50 20 162 3.6E-44 T 11-10-2018 XFUD_08410 3aeffe671ac140da5ea6e441635a5e1e 164 PIRSF PIRSF028470 1 162 1.3E-56 T 11-10-2018 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related XFUD_02505 44e241c08e1081d3b304ac05114574ff 759 Gene3D G3DSA:2.170.130.10 53 180 9.8E-35 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFUD_02505 44e241c08e1081d3b304ac05114574ff 759 Pfam PF00593 TonB dependent receptor 272 757 5.9E-50 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFUD_02505 44e241c08e1081d3b304ac05114574ff 759 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 758 4.2E-70 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 XFUD_02505 44e241c08e1081d3b304ac05114574ff 759 SUPERFAMILY SSF56935 33 758 6.02E-113 T 11-10-2018 XFUD_02505 44e241c08e1081d3b304ac05114574ff 759 Gene3D G3DSA:2.40.170.20 185 759 2.5E-111 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XFUD_02505 44e241c08e1081d3b304ac05114574ff 759 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 171 1.1E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFUD_03365 ff90803cb2d041db1e2b10ef0fde7abd 87 Pfam PF04999 Cell division protein FtsL 5 87 1.3E-25 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 XFUD_03365 ff90803cb2d041db1e2b10ef0fde7abd 87 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 4 85 1.0E-23 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 XFUD_03365 ff90803cb2d041db1e2b10ef0fde7abd 87 Hamap MF_00910 Cell division protein FtsL [ftsL]. 2 85 16.566 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 XFUD_04865 fe086dde420220edd17f8e89b0ac6913 265 PRINTS PR00123 ATP synthase A subunit signature 245 260 1.1E-12 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04865 fe086dde420220edd17f8e89b0ac6913 265 PRINTS PR00123 ATP synthase A subunit signature 95 111 1.1E-12 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04865 fe086dde420220edd17f8e89b0ac6913 265 PRINTS PR00123 ATP synthase A subunit signature 192 214 1.1E-12 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04865 fe086dde420220edd17f8e89b0ac6913 265 Pfam PF00119 ATP synthase A chain 38 259 2.6E-54 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04865 fe086dde420220edd17f8e89b0ac6913 265 SUPERFAMILY SSF81336 88 259 3.79E-39 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04865 fe086dde420220edd17f8e89b0ac6913 265 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 26 259 6.8E-43 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04865 fe086dde420220edd17f8e89b0ac6913 265 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 265 14.966 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04865 fe086dde420220edd17f8e89b0ac6913 265 ProSitePatterns PS00449 ATP synthase a subunit signature. 195 204 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04865 fe086dde420220edd17f8e89b0ac6913 265 Gene3D G3DSA:1.20.120.220 86 265 3.5E-51 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_10735 d3057749534573a14cf8a8ab54c931c5 342 Pfam PF13394 4Fe-4S single cluster domain 122 193 3.2E-5 T 11-10-2018 XFUD_10735 d3057749534573a14cf8a8ab54c931c5 342 SUPERFAMILY SSF102114 112 331 9.94E-21 T 11-10-2018 XFUD_10735 d3057749534573a14cf8a8ab54c931c5 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 22 341 6.2E-134 T 11-10-2018 IPR022462 Lysine-2,3-aminomutase-like XFUD_10735 d3057749534573a14cf8a8ab54c931c5 342 PIRSF PIRSF004911 11 342 1.0E-102 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase XFUD_10735 d3057749534573a14cf8a8ab54c931c5 342 Gene3D G3DSA:3.20.20.70 57 341 1.1E-79 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_10735 d3057749534573a14cf8a8ab54c931c5 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 22 335 2.0E-86 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase XFUD_04535 67e3bae20c566113f952b7c68f8dc3da 364 Pfam PF00005 ABC transporter 22 162 1.3E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_04535 67e3bae20c566113f952b7c68f8dc3da 364 SUPERFAMILY SSF50331 238 361 4.37E-27 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal XFUD_04535 67e3bae20c566113f952b7c68f8dc3da 364 Gene3D G3DSA:3.40.50.300 3 222 2.8E-61 T 11-10-2018 XFUD_04535 67e3bae20c566113f952b7c68f8dc3da 364 Pfam PF08402 TOBE domain 282 353 3.2E-10 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 XFUD_04535 67e3bae20c566113f952b7c68f8dc3da 364 Gene3D G3DSA:2.40.50.940 223 354 1.9E-30 T 11-10-2018 XFUD_04535 67e3bae20c566113f952b7c68f8dc3da 364 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_04535 67e3bae20c566113f952b7c68f8dc3da 364 SMART SM00382 29 211 1.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_04535 67e3bae20c566113f952b7c68f8dc3da 364 SUPERFAMILY SSF52540 4 242 5.46E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_04535 67e3bae20c566113f952b7c68f8dc3da 364 Gene3D G3DSA:2.40.50.140 289 345 1.9E-30 T 11-10-2018 XFUD_03495 e2e0900dee0f9b512c889e4338a9e08c 334 Pfam PF00274 Fructose-bisphosphate aldolase class-I 6 333 3.6E-136 T 11-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03495 e2e0900dee0f9b512c889e4338a9e08c 334 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 211 221 - T 11-10-2018 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 XFUD_03495 e2e0900dee0f9b512c889e4338a9e08c 334 Gene3D G3DSA:3.20.20.70 2 334 5.2E-149 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_03495 e2e0900dee0f9b512c889e4338a9e08c 334 SUPERFAMILY SSF51569 4 333 5.34E-131 T 11-10-2018 XFUD_03720 5d8f0656ba4c9bbbcee27bea18ec123d 170 Gene3D G3DSA:1.25.40.10 32 162 2.7E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_03720 5d8f0656ba4c9bbbcee27bea18ec123d 170 SUPERFAMILY SSF48452 62 158 1.97E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 XFUD_01075 50c8e6b77df49b5f82f2fed5900af5d6 304 SUPERFAMILY SSF103481 195 290 1.28E-8 T 11-10-2018 XFUD_01075 50c8e6b77df49b5f82f2fed5900af5d6 304 SUPERFAMILY SSF103481 46 140 3.27E-7 T 11-10-2018 XFUD_01075 50c8e6b77df49b5f82f2fed5900af5d6 304 Pfam PF00892 EamA-like transporter family 16 139 2.6E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XFUD_01075 50c8e6b77df49b5f82f2fed5900af5d6 304 Pfam PF00892 EamA-like transporter family 148 290 3.4E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 Pfam PF00549 CoA-ligase 152 270 9.8E-19 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 2.3E-138 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 Pfam PF02629 CoA binding domain 6 99 3.2E-31 T 11-10-2018 IPR003781 CoA-binding GO:0048037 XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 PIRSF PIRSF001553 1 290 3.2E-130 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 SUPERFAMILY SSF51735 1 123 2.25E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 289 43.35 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 Gene3D G3DSA:3.40.50.720 2 124 3.7E-52 T 11-10-2018 XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 SUPERFAMILY SSF52210 124 289 4.19E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 Gene3D G3DSA:3.40.50.261 125 290 6.7E-72 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 SMART SM00881 4 100 1.3E-35 T 11-10-2018 IPR003781 CoA-binding GO:0048037 XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 153 182 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 PRINTS PR01798 Succinyl-CoA synthase signature 178 196 3.1E-35 T 11-10-2018 XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 3.1E-35 T 11-10-2018 XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 3.1E-35 T 11-10-2018 XFUD_11120 ffd0a9448a48a6333a3be9426cef1e8d 290 PRINTS PR01798 Succinyl-CoA synthase signature 209 222 3.1E-35 T 11-10-2018 XFUD_08435 413a7326a5aed014d189d771fa4f2ff8 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 416 3.4E-92 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 XFUD_08435 413a7326a5aed014d189d771fa4f2ff8 432 Gene3D G3DSA:3.40.1190.10 1 284 1.4E-83 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFUD_08435 413a7326a5aed014d189d771fa4f2ff8 432 Gene3D G3DSA:3.90.190.20 286 422 2.3E-23 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFUD_08435 413a7326a5aed014d189d771fa4f2ff8 432 Pfam PF08245 Mur ligase middle domain 48 191 6.7E-10 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 XFUD_08435 413a7326a5aed014d189d771fa4f2ff8 432 PIRSF PIRSF001563 1 424 8.8E-99 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 XFUD_08435 413a7326a5aed014d189d771fa4f2ff8 432 SUPERFAMILY SSF53623 4 282 7.33E-84 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 XFUD_08435 413a7326a5aed014d189d771fa4f2ff8 432 SUPERFAMILY SSF53244 286 421 8.97E-25 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 57 186 7.6E-19 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 189 529 8.3E-114 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 Gene3D G3DSA:3.20.20.80 189 551 1.4E-156 T 11-10-2018 XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 SUPERFAMILY SSF55545 50 188 3.4E-23 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 SUPERFAMILY SSF51445 189 542 1.22E-118 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 578 631 1.1E-14 T 11-10-2018 XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 PRINTS PR00738 Glycosyl hydrolase family 20 signature 279 296 2.0E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 PRINTS PR00738 Glycosyl hydrolase family 20 signature 493 509 2.0E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 PRINTS PR00738 Glycosyl hydrolase family 20 signature 212 233 2.0E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 PRINTS PR00738 Glycosyl hydrolase family 20 signature 146 166 2.0E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 PRINTS PR00738 Glycosyl hydrolase family 20 signature 183 200 2.0E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 PRINTS PR00738 Glycosyl hydrolase family 20 signature 327 345 2.0E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 PRINTS PR00738 Glycosyl hydrolase family 20 signature 349 362 2.0E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 PRINTS PR00738 Glycosyl hydrolase family 20 signature 511 528 2.0E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 XFUD_03585 947e08acd8b4afb208e07fbce6239896 809 Gene3D G3DSA:3.30.379.10 57 188 1.4E-156 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 XFUD_02860 cd931689bdee4a24f2907405fd6361cf 726 SUPERFAMILY SSF56672 187 724 9.45E-68 T 11-10-2018 XFUD_02860 cd931689bdee4a24f2907405fd6361cf 726 SMART SM00482 372 690 4.2E-6 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_02860 cd931689bdee4a24f2907405fd6361cf 726 Gene3D G3DSA:3.30.420.10 6 193 5.6E-6 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 XFUD_02860 cd931689bdee4a24f2907405fd6361cf 726 Pfam PF00476 DNA polymerase family A 267 498 3.1E-10 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 XFUD_02860 cd931689bdee4a24f2907405fd6361cf 726 SUPERFAMILY SSF53098 27 179 4.74E-10 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily XFUD_06965 e067451e9e789007f032ebce2169e39b 339 Gene3D G3DSA:1.10.443.10 170 335 1.1E-28 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFUD_06965 e067451e9e789007f032ebce2169e39b 339 Gene3D G3DSA:1.10.150.130 64 168 1.5E-7 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFUD_06965 e067451e9e789007f032ebce2169e39b 339 Pfam PF00589 Phage integrase family 177 330 5.0E-16 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFUD_06965 e067451e9e789007f032ebce2169e39b 339 SUPERFAMILY SSF56349 65 329 1.44E-48 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFUD_10110 786b1cb6b300e9ed6a0a4b59e83c932d 371 Gene3D G3DSA:3.30.2420.10 291 365 1.0E-21 T 11-10-2018 XFUD_10110 786b1cb6b300e9ed6a0a4b59e83c932d 371 PRINTS PR01374 Gram-negative bacterial tonB protein signature 313 331 3.8E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XFUD_10110 786b1cb6b300e9ed6a0a4b59e83c932d 371 PRINTS PR01374 Gram-negative bacterial tonB protein signature 332 349 3.8E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XFUD_10110 786b1cb6b300e9ed6a0a4b59e83c932d 371 PRINTS PR01374 Gram-negative bacterial tonB protein signature 292 313 3.8E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 XFUD_10110 786b1cb6b300e9ed6a0a4b59e83c932d 371 SUPERFAMILY SSF74653 290 356 1.96E-20 T 11-10-2018 XFUD_10110 786b1cb6b300e9ed6a0a4b59e83c932d 371 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 298 368 2.2E-20 T 11-10-2018 IPR006260 TonB/TolA, C-terminal XFUD_10110 786b1cb6b300e9ed6a0a4b59e83c932d 371 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 296 356 1.2E-18 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 XFUD_09810 8bb268c3cc96fb133733ba7e12ceb2d0 577 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 181 206 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site XFUD_09810 8bb268c3cc96fb133733ba7e12ceb2d0 577 Pfam PF00474 Sodium:solute symporter family 66 491 6.4E-102 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 XFUD_09810 8bb268c3cc96fb133733ba7e12ceb2d0 577 Gene3D G3DSA:1.20.1730.10 54 571 1.2E-56 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily XFUD_09810 8bb268c3cc96fb133733ba7e12ceb2d0 577 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 66 491 1.6E-57 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 XFUD_01830 759a0fe3e69a0759f040f84574615cb4 156 Pfam PF13673 Acetyltransferase (GNAT) domain 42 135 1.7E-11 T 11-10-2018 IPR000182 GNAT domain XFUD_01830 759a0fe3e69a0759f040f84574615cb4 156 SUPERFAMILY SSF55729 11 152 1.06E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFUD_01830 759a0fe3e69a0759f040f84574615cb4 156 Gene3D G3DSA:3.40.630.30 13 156 9.0E-38 T 11-10-2018 XFUD_01830 759a0fe3e69a0759f040f84574615cb4 156 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 20 151 3.9E-50 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 XFUD_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 Pfam PF13245 AAA domain 157 313 4.6E-30 T 11-10-2018 XFUD_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 Gene3D G3DSA:3.40.50.300 111 353 9.1E-58 T 11-10-2018 XFUD_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 SUPERFAMILY SSF52540 5 323 2.39E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 Gene3D G3DSA:1.10.10.1020 1 110 1.4E-5 T 11-10-2018 XFUD_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 Gene3D G3DSA:3.40.50.300 380 480 2.8E-6 T 11-10-2018 XFUD_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 Gene3D G3DSA:3.40.50.300 487 599 1.3E-23 T 11-10-2018 XFUD_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 13 608 45.017 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 XFUD_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 Pfam PF13538 UvrD-like helicase C-terminal domain 539 585 2.7E-14 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain XFUD_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 SUPERFAMILY SSF52540 290 609 3.36E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01780 0fdff9fc0e0700bcfbad849669e08d7b 639 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 4 610 6.2E-200 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 XFUD_01400 d2d9b1173cd19f2946b4321e8eec3b29 396 SUPERFAMILY SSF56935 25 390 6.02E-11 T 11-10-2018 XFUD_01400 d2d9b1173cd19f2946b4321e8eec3b29 396 Gene3D G3DSA:2.40.160.10 15 396 6.0E-74 T 11-10-2018 IPR023614 Porin domain superfamily XFUD_01400 d2d9b1173cd19f2946b4321e8eec3b29 396 Pfam PF07396 Phosphate-selective porin O and P 33 396 6.5E-100 T 11-10-2018 IPR010870 Phosphate-selective porin O/P XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.6E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 1.6E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.6E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 1.6E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 199 224 1.6E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 169 195 1.6E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.6E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.6E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 Pfam PF00815 Histidinol dehydrogenase 26 427 4.8E-161 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 Gene3D G3DSA:3.40.50.1980 31 232 4.6E-118 T 11-10-2018 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 426 6.7E-159 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 SUPERFAMILY SSF53720 3 427 2.35E-79 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 Gene3D G3DSA:3.40.50.1980 234 349 4.6E-118 T 11-10-2018 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 427 41.0 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 PIRSF PIRSF000099 1 430 1.7E-158 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 XFUD_09670 0dd6973ae47eb75bb0bdf32b250a3a2a 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 XFUD_01660 e7779b3f90ad33afb972c8b02c01f109 190 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XFUD_01660 e7779b3f90ad33afb972c8b02c01f109 190 SUPERFAMILY SSF55811 6 151 6.63E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XFUD_01660 e7779b3f90ad33afb972c8b02c01f109 190 Pfam PF00293 NUDIX domain 7 130 4.8E-22 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XFUD_01660 e7779b3f90ad33afb972c8b02c01f109 190 Gene3D G3DSA:3.90.79.10 1 159 6.3E-41 T 11-10-2018 XFUD_01660 e7779b3f90ad33afb972c8b02c01f109 190 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 35.321 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH XFUD_05290 288f0168801ffd2bd3072f63115fedac 293 Pfam PF00491 Arginase family 67 223 1.2E-13 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 XFUD_05290 288f0168801ffd2bd3072f63115fedac 293 Gene3D G3DSA:3.40.800.10 28 286 3.3E-28 T 11-10-2018 XFUD_05290 288f0168801ffd2bd3072f63115fedac 293 SUPERFAMILY SSF52768 8 284 1.46E-39 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily XFUD_01230 cc9d91eeb29b5433fdf3c5be0894c170 72 SUPERFAMILY SSF89447 3 43 5.41E-11 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily XFUD_01230 cc9d91eeb29b5433fdf3c5be0894c170 72 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 42 2.4E-9 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XFUD_01230 cc9d91eeb29b5433fdf3c5be0894c170 72 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 4 43 1.7E-12 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XFUD_01230 cc9d91eeb29b5433fdf3c5be0894c170 72 SMART SM00966 3 48 8.4E-11 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 XFUD_01230 cc9d91eeb29b5433fdf3c5be0894c170 72 Gene3D G3DSA:2.10.260.10 2 41 1.7E-11 T 11-10-2018 XFUD_02440 cd8389f4c6dd95df3d5cfeae3bdeba32 222 Pfam PF00551 Formyl transferase 9 185 3.5E-48 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFUD_02440 cd8389f4c6dd95df3d5cfeae3bdeba32 222 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 9 196 2.0E-59 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 XFUD_02440 cd8389f4c6dd95df3d5cfeae3bdeba32 222 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 9 192 26.099 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 XFUD_02440 cd8389f4c6dd95df3d5cfeae3bdeba32 222 Gene3D G3DSA:3.40.50.170 1 207 1.0E-67 T 11-10-2018 XFUD_02440 cd8389f4c6dd95df3d5cfeae3bdeba32 222 SUPERFAMILY SSF53328 8 199 2.62E-56 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 XFUD_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 SUPERFAMILY SSF56655 7 257 1.96E-73 T 11-10-2018 XFUD_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 XFUD_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site XFUD_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 6.1E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFUD_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 6.1E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFUD_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 6.1E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFUD_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 Gene3D G3DSA:3.40.190.80 155 258 2.9E-30 T 11-10-2018 XFUD_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 Pfam PF00459 Inositol monophosphatase family 13 249 2.2E-45 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 XFUD_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 254 2.9E-86 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 XFUD_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 8 256 40.198 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 XFUD_00800 118d4d8faa9bb295c9bd137b8b5149e9 266 Gene3D G3DSA:3.30.540.10 6 154 2.7E-43 T 11-10-2018 XFUD_02500 24da25d37505e884b2f439a78d921ff9 230 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 180 6.3E-14 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 XFUD_02500 24da25d37505e884b2f439a78d921ff9 230 Gene3D G3DSA:4.10.860.20 184 230 1.1E-17 T 11-10-2018 XFUD_02500 24da25d37505e884b2f439a78d921ff9 230 Gene3D G3DSA:2.60.120.620 1 182 3.1E-43 T 11-10-2018 XFUD_02500 24da25d37505e884b2f439a78d921ff9 230 SMART SM00702 1 181 4.0E-32 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 XFUD_02500 24da25d37505e884b2f439a78d921ff9 230 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 230 44.618 T 11-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 XFUD_11930 d602227295ca51d07c8f35d98071cc61 262 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 1 261 1.4E-78 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFUD_10360 7467c19f1a9ccf4e5cb9ce245e3aa6d9 205 SUPERFAMILY SSF51445 4 203 1.11E-49 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily XFUD_10360 7467c19f1a9ccf4e5cb9ce245e3aa6d9 205 Gene3D G3DSA:3.20.20.80 2 204 3.2E-51 T 11-10-2018 XFUD_10360 7467c19f1a9ccf4e5cb9ce245e3aa6d9 205 Pfam PF01183 Glycosyl hydrolases family 25 6 194 2.0E-37 T 11-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 XFUD_01705 70fd7b6d7c62d82c39b74b3e4a93d956 389 Gene3D G3DSA:2.30.130.10 9 71 1.1E-15 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 XFUD_01705 70fd7b6d7c62d82c39b74b3e4a93d956 389 Gene3D G3DSA:3.40.50.150 178 388 1.9E-67 T 11-10-2018 XFUD_01705 70fd7b6d7c62d82c39b74b3e4a93d956 389 Gene3D G3DSA:3.30.750.80 72 177 3.3E-26 T 11-10-2018 XFUD_01705 70fd7b6d7c62d82c39b74b3e4a93d956 389 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 174 329 1.6E-17 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 XFUD_01705 70fd7b6d7c62d82c39b74b3e4a93d956 389 SUPERFAMILY SSF88697 12 69 7.7E-10 T 11-10-2018 IPR015947 PUA-like superfamily XFUD_01705 70fd7b6d7c62d82c39b74b3e4a93d956 389 SUPERFAMILY SSF53335 78 383 3.08E-66 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_10255 c513d6f52a70a47d2fc871faee2ed452 377 ProDom PD011569 METAL-BINDING IRON IRON-SULFUR 4FE-4S FERREDOXIN OXIDOREDUCTASE DOMAIN ELECTRON METHANOGENESIS A 64 290 3.0E-4 T 11-10-2018 IPR002708 Homocysteine biosynthesis enzyme, sulfur-incorporation XFUD_10255 c513d6f52a70a47d2fc871faee2ed452 377 SUPERFAMILY SSF53756 52 364 2.01E-10 T 11-10-2018 XFUD_10255 c513d6f52a70a47d2fc871faee2ed452 377 Gene3D G3DSA:3.40.50.11010 11 359 8.6E-139 T 11-10-2018 XFUD_10255 c513d6f52a70a47d2fc871faee2ed452 377 Gene3D G3DSA:3.40.50.2000 199 354 8.6E-139 T 11-10-2018 XFUD_00035 4dc2f50e3bd443b00a626e55860c836b 271 Gene3D G3DSA:3.30.2010.10 59 141 1.2E-5 T 11-10-2018 XFUD_00035 4dc2f50e3bd443b00a626e55860c836b 271 Pfam PF01435 Peptidase family M48 61 246 5.6E-35 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 XFUD_12190 0ca64f6df0c447fbfa7ad237145a20f9 213 TIGRFAM TIGR02791 VirB5: P-type DNA transfer protein VirB5 1 199 5.1E-81 T 11-10-2018 IPR014158 Type IV secretion system, VirB5 XFUD_12190 0ca64f6df0c447fbfa7ad237145a20f9 213 Pfam PF07996 Type IV secretion system proteins 13 197 9.9E-51 T 11-10-2018 IPR014158 Type IV secretion system, VirB5 XFUD_12190 0ca64f6df0c447fbfa7ad237145a20f9 213 Gene3D G3DSA:1.20.58.430 13 199 4.8E-52 T 11-10-2018 IPR023220 Type IV secretion system, VirB5-domain XFUD_12190 0ca64f6df0c447fbfa7ad237145a20f9 213 SUPERFAMILY SSF101082 13 199 4.18E-43 T 11-10-2018 XFUD_06980 06759f998952ed69206183453fa53a80 265 Gene3D G3DSA:2.160.10.10 175 265 6.4E-14 T 11-10-2018 XFUD_06980 06759f998952ed69206183453fa53a80 265 Gene3D G3DSA:2.160.10.10 92 174 1.1E-15 T 11-10-2018 XFUD_06980 06759f998952ed69206183453fa53a80 265 SUPERFAMILY SSF51161 77 260 1.27E-42 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFUD_06980 06759f998952ed69206183453fa53a80 265 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 214 242 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XFUD_06980 06759f998952ed69206183453fa53a80 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 2.2E-4 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_06980 06759f998952ed69206183453fa53a80 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 154 3.4E-7 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_06980 06759f998952ed69206183453fa53a80 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 157 190 9.9E-4 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_06455 6bc376d0477acdc1c4103fbe362db3e6 255 ProDom PD046566 PATHWAY N GENERAL SECRETION PRECURSOR SIGNAL MEMBRANE XPSN TRANSMEMBRANE INNER 1 230 4.0E-123 T 11-10-2018 XFUD_02150 29d0ebe2aaa840510aea5d6a97cb4894 119 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 3 110 1.8E-25 T 11-10-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 XFUD_07050 8da0747d97c439ecef3a7e8acace3cb3 81 Gene3D G3DSA:1.10.260.40 1 81 1.1E-8 T 11-10-2018 XFUD_05530 bbb11d15ea6495ca578328add2037ec5 687 Gene3D G3DSA:3.30.1390.30 86 161 3.0E-43 T 11-10-2018 XFUD_05530 bbb11d15ea6495ca578328add2037ec5 687 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 612 46.192 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFUD_05530 bbb11d15ea6495ca578328add2037ec5 687 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 234 9.5E-42 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 XFUD_05530 bbb11d15ea6495ca578328add2037ec5 687 SUPERFAMILY SSF56519 58 249 1.26E-46 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 XFUD_05530 bbb11d15ea6495ca578328add2037ec5 687 Gene3D G3DSA:3.90.1310.10 67 245 3.0E-43 T 11-10-2018 XFUD_05530 bbb11d15ea6495ca578328add2037ec5 687 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 608 5.6E-211 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 XFUD_05530 bbb11d15ea6495ca578328add2037ec5 687 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 605 3.1E-67 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 XFUD_05530 bbb11d15ea6495ca578328add2037ec5 687 SUPERFAMILY SSF56601 250 608 3.42E-94 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like XFUD_05530 bbb11d15ea6495ca578328add2037ec5 687 Gene3D G3DSA:3.40.710.10 249 610 3.8E-92 T 11-10-2018 XFUD_01545 2d938d102e271a34d29267a1ff4c0784 321 SUPERFAMILY SSF51430 1 319 5.5E-90 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XFUD_01545 2d938d102e271a34d29267a1ff4c0784 321 Gene3D G3DSA:3.20.20.100 1 321 1.1E-107 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily XFUD_01545 2d938d102e271a34d29267a1ff4c0784 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 164 183 2.2E-11 T 11-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XFUD_01545 2d938d102e271a34d29267a1ff4c0784 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 274 287 2.2E-11 T 11-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XFUD_01545 2d938d102e271a34d29267a1ff4c0784 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 113 123 2.2E-11 T 11-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XFUD_01545 2d938d102e271a34d29267a1ff4c0784 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 208 214 2.2E-11 T 11-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XFUD_01545 2d938d102e271a34d29267a1ff4c0784 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 236 248 2.2E-11 T 11-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XFUD_01545 2d938d102e271a34d29267a1ff4c0784 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 261 273 2.2E-11 T 11-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 XFUD_01545 2d938d102e271a34d29267a1ff4c0784 321 Pfam PF00248 Aldo/keto reductase family 16 307 8.3E-68 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain XFUD_07925 f96917b8ff544924c8a47f7452d1ed18 442 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 264 417 2.0E-22 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal XFUD_07925 f96917b8ff544924c8a47f7452d1ed18 442 SMART SM00833 264 417 4.4E-41 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal XFUD_07925 f96917b8ff544924c8a47f7452d1ed18 442 Gene3D G3DSA:3.40.50.300 10 237 4.3E-67 T 11-10-2018 XFUD_07925 f96917b8ff544924c8a47f7452d1ed18 442 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 13 218 3.2E-57 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain XFUD_07925 f96917b8ff544924c8a47f7452d1ed18 442 SUPERFAMILY SSF52540 11 317 2.57E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_07390 3e2d9754f0c0f63c4a21e7e43eb66cb2 82 PIRSF PIRSF037799 1 81 6.8E-33 T 11-10-2018 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 XFUD_07390 3e2d9754f0c0f63c4a21e7e43eb66cb2 82 Gene3D G3DSA:3.30.429.10 1 55 3.5E-12 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily XFUD_07390 3e2d9754f0c0f63c4a21e7e43eb66cb2 82 Pfam PF01361 Tautomerase enzyme 2 59 7.6E-19 T 11-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 XFUD_07390 3e2d9754f0c0f63c4a21e7e43eb66cb2 82 SUPERFAMILY SSF55331 2 74 2.83E-14 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily XFUD_09685 f88fc2bb159a50f015ca549b468ee84a 466 Gene3D G3DSA:3.40.50.800 365 460 2.8E-22 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily XFUD_09685 f88fc2bb159a50f015ca549b468ee84a 466 Gene3D G3DSA:3.30.930.10 1 362 6.3E-100 T 11-10-2018 XFUD_09685 f88fc2bb159a50f015ca549b468ee84a 466 Pfam PF13393 Histidyl-tRNA synthetase 9 350 2.2E-29 T 11-10-2018 XFUD_09685 f88fc2bb159a50f015ca549b468ee84a 466 PIRSF PIRSF001549 1 460 2.5E-132 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 XFUD_09685 f88fc2bb159a50f015ca549b468ee84a 466 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 448 1.1E-114 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 XFUD_09685 f88fc2bb159a50f015ca549b468ee84a 466 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 458 27.934 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 XFUD_09685 f88fc2bb159a50f015ca549b468ee84a 466 Pfam PF03129 Anticodon binding domain 369 457 2.3E-12 T 11-10-2018 IPR004154 Anticodon-binding XFUD_09685 f88fc2bb159a50f015ca549b468ee84a 466 SUPERFAMILY SSF55681 4 358 1.93E-68 T 11-10-2018 XFUD_09685 f88fc2bb159a50f015ca549b468ee84a 466 SUPERFAMILY SSF52954 366 457 1.06E-20 T 11-10-2018 XFUD_07495 96428418c3a2a81095ef28c3b3f2d0d2 213 SUPERFAMILY SSF51735 1 200 7.97E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_07495 96428418c3a2a81095ef28c3b3f2d0d2 213 Pfam PF13460 NAD(P)H-binding 8 189 2.0E-48 T 11-10-2018 IPR016040 NAD(P)-binding domain XFUD_07495 96428418c3a2a81095ef28c3b3f2d0d2 213 Gene3D G3DSA:3.40.50.720 1 212 1.2E-55 T 11-10-2018 XFUD_08110 59546721cead699dba985bb3925c623f 103 Gene3D G3DSA:1.10.287.950 2 82 3.1E-5 T 11-10-2018 XFUD_02990 f48aca327b54b9fdcee593194300b8b6 74 ProDom PD272324 XF1567/XF1672 1 68 1.0E-28 T 11-10-2018 IPR020247 Uncharacterised protein family XF1567 XFUD_10875 f48aca327b54b9fdcee593194300b8b6 74 ProDom PD272324 XF1567/XF1672 1 68 1.0E-28 T 11-10-2018 IPR020247 Uncharacterised protein family XF1567 XFUD_00370 2737aac2a24bf23eb8ca55a999a8d259 317 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 312 28.968 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 XFUD_00370 2737aac2a24bf23eb8ca55a999a8d259 317 SUPERFAMILY SSF52540 10 154 4.47E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_00370 2737aac2a24bf23eb8ca55a999a8d259 317 Gene3D G3DSA:3.40.50.300 13 299 2.2E-96 T 11-10-2018 XFUD_00370 2737aac2a24bf23eb8ca55a999a8d259 317 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 302 1.3E-91 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 XFUD_00370 2737aac2a24bf23eb8ca55a999a8d259 317 Gene3D G3DSA:1.10.20.140 116 188 2.2E-96 T 11-10-2018 XFUD_00370 2737aac2a24bf23eb8ca55a999a8d259 317 Pfam PF01715 IPP transferase 43 292 2.9E-80 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 XFUD_09125 83ad4a4789890cac75ae7670d25d68a6 301 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 72 224 4.9E-47 T 11-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 XFUD_09125 83ad4a4789890cac75ae7670d25d68a6 301 SUPERFAMILY SSF51197 92 230 2.09E-20 T 11-10-2018 XFUD_09125 83ad4a4789890cac75ae7670d25d68a6 301 Gene3D G3DSA:2.60.120.330 44 233 3.8E-43 T 11-10-2018 IPR027443 Isopenicillin N synthase-like XFUD_07855 07d729794c74a882c59dcd1227a6b151 615 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 59 219 5.0E-14 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like XFUD_06115 91eaf0a934ce37a60cbf20885d04da32 455 SMART SM00382 56 172 2.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_06115 91eaf0a934ce37a60cbf20885d04da32 455 Pfam PF16193 AAA C-terminal domain 194 271 2.4E-22 T 11-10-2018 IPR032423 AAA C-terminal domain XFUD_06115 91eaf0a934ce37a60cbf20885d04da32 455 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 25 146 1.6E-13 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 XFUD_06115 91eaf0a934ce37a60cbf20885d04da32 455 Pfam PF12002 MgsA AAA+ ATPase C terminal 273 438 4.6E-62 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal XFUD_06115 91eaf0a934ce37a60cbf20885d04da32 455 Gene3D G3DSA:1.10.8.60 172 244 7.9E-18 T 11-10-2018 XFUD_06115 91eaf0a934ce37a60cbf20885d04da32 455 SUPERFAMILY SSF48019 256 438 8.5E-70 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 XFUD_06115 91eaf0a934ce37a60cbf20885d04da32 455 Gene3D G3DSA:1.20.272.10 246 349 8.7E-40 T 11-10-2018 XFUD_06115 91eaf0a934ce37a60cbf20885d04da32 455 Gene3D G3DSA:3.40.50.300 18 170 2.2E-42 T 11-10-2018 XFUD_06115 91eaf0a934ce37a60cbf20885d04da32 455 Gene3D G3DSA:1.10.3710.10 350 451 1.4E-31 T 11-10-2018 XFUD_06115 91eaf0a934ce37a60cbf20885d04da32 455 SUPERFAMILY SSF52540 20 235 1.25E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01525 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Pfam PF03796 DnaB-like helicase C terminal domain 207 461 1.9E-116 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 XFUD_01525 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Gene3D G3DSA:3.40.50.300 190 467 2.2E-108 T 11-10-2018 XFUD_01525 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Gene3D G3DSA:1.10.860.10 23 183 1.7E-51 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal XFUD_01525 5df8d370cb487a8fdf5cd9d4e9b78d84 471 SUPERFAMILY SSF48024 27 139 1.57E-36 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 XFUD_01525 5df8d370cb487a8fdf5cd9d4e9b78d84 471 SUPERFAMILY SSF52540 205 454 2.41E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_01525 5df8d370cb487a8fdf5cd9d4e9b78d84 471 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 29 463 7.6E-176 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 XFUD_01525 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Pfam PF00772 DnaB-like helicase N terminal domain 29 130 4.2E-33 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 XFUD_08545 85a4138ed848fc8923aecf2b5f0bca84 106 Pfam PF13698 Domain of unknown function (DUF4156) 24 103 6.3E-11 T 11-10-2018 IPR025294 Protein of unknown function DUF4156 XFUD_09215 969451ba46b811e202c68979391f62d8 229 Pfam PF05876 Phage terminase large subunit (GpA) 10 165 9.4E-25 T 11-10-2018 IPR008866 Bacteriophage lambda, GpA XFUD_08550 15a1565f0095128c3107b07599e60e97 155 Pfam PF00588 SpoU rRNA Methylase family 8 145 1.8E-31 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 XFUD_08550 15a1565f0095128c3107b07599e60e97 155 PIRSF PIRSF029256 5 155 7.1E-62 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 XFUD_08550 15a1565f0095128c3107b07599e60e97 155 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 6 155 32.138 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 XFUD_08550 15a1565f0095128c3107b07599e60e97 155 Gene3D G3DSA:3.40.1280.10 2 155 8.5E-61 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal XFUD_08550 15a1565f0095128c3107b07599e60e97 155 SUPERFAMILY SSF75217 8 154 7.19E-43 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases XFUD_07605 9676c3c56f2a8e6e5e2ac6016620598a 136 Gene3D G3DSA:2.60.120.10 1 130 1.0E-52 T 11-10-2018 IPR014710 RmlC-like jelly roll fold XFUD_07605 9676c3c56f2a8e6e5e2ac6016620598a 136 Pfam PF07883 Cupin domain 42 100 3.6E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel XFUD_07605 9676c3c56f2a8e6e5e2ac6016620598a 136 SUPERFAMILY SSF51182 7 129 2.96E-34 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily XFUD_04605 b6c16290cec0e766eb9df72bfe99c423 582 Gene3D G3DSA:1.20.1560.10 1 327 4.8E-69 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XFUD_04605 b6c16290cec0e766eb9df72bfe99c423 582 SUPERFAMILY SSF90123 11 324 9.29E-66 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 XFUD_04605 b6c16290cec0e766eb9df72bfe99c423 582 Pfam PF00005 ABC transporter 356 506 9.0E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_04605 b6c16290cec0e766eb9df72bfe99c423 582 Gene3D G3DSA:3.40.50.300 328 578 3.0E-88 T 11-10-2018 XFUD_04605 b6c16290cec0e766eb9df72bfe99c423 582 SUPERFAMILY SSF52540 331 577 9.02E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_04605 b6c16290cec0e766eb9df72bfe99c423 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 9 579 9.3E-261 T 11-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 XFUD_04605 b6c16290cec0e766eb9df72bfe99c423 582 SMART SM00382 365 552 4.3E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_04605 b6c16290cec0e766eb9df72bfe99c423 582 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_04605 b6c16290cec0e766eb9df72bfe99c423 582 Pfam PF00664 ABC transporter transmembrane region 32 290 1.8E-36 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 XFUD_10770 f4c34aabcf640f58c8f4472a98523c67 160 PIRSF PIRSF029208 25 159 7.4E-58 T 11-10-2018 IPR016912 Bacteriophage P2, GpU XFUD_10770 f4c34aabcf640f58c8f4472a98523c67 160 Pfam PF06995 Phage P2 GpU 33 152 7.2E-39 T 11-10-2018 IPR009734 Myoviridae, GpU XFUD_03095 f4c34aabcf640f58c8f4472a98523c67 160 PIRSF PIRSF029208 25 159 7.4E-58 T 11-10-2018 IPR016912 Bacteriophage P2, GpU XFUD_03095 f4c34aabcf640f58c8f4472a98523c67 160 Pfam PF06995 Phage P2 GpU 33 152 7.2E-39 T 11-10-2018 IPR009734 Myoviridae, GpU XFUD_00625 03f63c261a56e5d77887bee0586a34f8 409 SUPERFAMILY SSF52507 10 184 2.88E-55 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 XFUD_00625 03f63c261a56e5d77887bee0586a34f8 409 Gene3D G3DSA:3.40.50.1950 7 190 3.3E-54 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 XFUD_00625 03f63c261a56e5d77887bee0586a34f8 409 Gene3D G3DSA:3.40.50.10300 196 409 3.1E-73 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 XFUD_00625 03f63c261a56e5d77887bee0586a34f8 409 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 10 403 4.7E-133 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 XFUD_00625 03f63c261a56e5d77887bee0586a34f8 409 Pfam PF02441 Flavoprotein 14 185 1.5E-42 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 XFUD_00625 03f63c261a56e5d77887bee0586a34f8 409 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 198 378 9.0E-68 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 XFUD_00625 03f63c261a56e5d77887bee0586a34f8 409 SUPERFAMILY SSF102645 196 408 2.09E-71 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 XFUD_04525 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 Hamap MF_00524 Glucokinase [glk]. 7 328 32.537 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XFUD_04525 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 SUPERFAMILY SSF53067 8 327 7.43E-58 T 11-10-2018 XFUD_04525 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 TIGRFAM TIGR00749 glk: glucokinase 9 322 1.6E-81 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XFUD_04525 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 Gene3D G3DSA:3.30.420.40 8 322 2.6E-95 T 11-10-2018 XFUD_04525 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 Gene3D G3DSA:3.40.367.20 107 311 2.6E-95 T 11-10-2018 XFUD_04525 ffb2fc9e06fcf7cdf57fce27c27aaf24 337 Pfam PF02685 Glucokinase 9 327 1.3E-111 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 XFUD_06605 4d5385a44b705eb00cf8d6b515c58628 120 Gene3D G3DSA:3.30.1330.70 1 120 1.9E-6 T 11-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 XFUD_06605 4d5385a44b705eb00cf8d6b515c58628 120 SUPERFAMILY SSF103084 2 119 6.67E-19 T 11-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 XFUD_01100 1cd3ceded45a50e54f35d5f36428cff5 295 Pfam PF00483 Nucleotidyl transferase 5 240 7.1E-65 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 XFUD_01100 1cd3ceded45a50e54f35d5f36428cff5 295 Gene3D G3DSA:3.90.550.10 1 294 1.7E-77 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_01100 1cd3ceded45a50e54f35d5f36428cff5 295 SUPERFAMILY SSF53448 4 289 8.34E-85 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_01100 1cd3ceded45a50e54f35d5f36428cff5 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 290 1.6E-155 T 11-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 XFUD_00900 074e153f670b8089a9c9c7525c73f86e 264 Gene3D G3DSA:3.20.20.70 1 263 1.4E-103 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_00900 074e153f670b8089a9c9c7525c73f86e 264 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 259 5.3E-94 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 XFUD_00900 074e153f670b8089a9c9c7525c73f86e 264 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 36.075 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 XFUD_00900 074e153f670b8089a9c9c7525c73f86e 264 SUPERFAMILY SSF51366 12 262 8.71E-90 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XFUD_00900 074e153f670b8089a9c9c7525c73f86e 264 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 XFUD_08640 4b867b2d45c4eeba0ec22fb05161e9f3 291 Gene3D G3DSA:3.90.550.10 3 183 8.6E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_08640 4b867b2d45c4eeba0ec22fb05161e9f3 291 SUPERFAMILY SSF53448 20 164 3.94E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_08640 4b867b2d45c4eeba0ec22fb05161e9f3 291 Pfam PF00535 Glycosyl transferase family 2 21 103 1.9E-14 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XFUD_09360 aab4dd394dde4ec4aaec4dbb00312a41 230 SMART SM00331 8 229 3.3E-15 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 XFUD_09360 aab4dd394dde4ec4aaec4dbb00312a41 230 Gene3D G3DSA:3.60.40.10 1 230 8.8E-54 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 XFUD_09360 aab4dd394dde4ec4aaec4dbb00312a41 230 SUPERFAMILY SSF81606 2 229 6.41E-52 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 XFUD_09360 aab4dd394dde4ec4aaec4dbb00312a41 230 SMART SM00332 3 227 1.9E-13 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 XFUD_09360 aab4dd394dde4ec4aaec4dbb00312a41 230 Pfam PF13672 Protein phosphatase 2C 17 192 4.1E-14 T 11-10-2018 XFUD_08065 dc0dc41009d9f943f4f3ff8ff891a252 73 Pfam PF11455 Protein of unknown function (DUF3018) 9 72 1.5E-28 T 11-10-2018 IPR021558 Protein of unknown function DUF3018 XFUD_05465 46345b2dbe4784ca0b898744943a3f79 338 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 67 326 3.6E-44 T 11-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region XFUD_05465 46345b2dbe4784ca0b898744943a3f79 338 Gene3D G3DSA:2.120.10.30 24 334 1.6E-93 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XFUD_05465 46345b2dbe4784ca0b898744943a3f79 338 SUPERFAMILY SSF63829 37 337 1.77E-57 T 11-10-2018 XFUD_01040 3a4408ae49794ada4ed273b7a3dc0bcd 293 Gene3D G3DSA:3.90.25.10 143 276 9.4E-81 T 11-10-2018 XFUD_01040 3a4408ae49794ada4ed273b7a3dc0bcd 293 Gene3D G3DSA:3.40.50.720 9 274 9.4E-81 T 11-10-2018 XFUD_01040 3a4408ae49794ada4ed273b7a3dc0bcd 293 SUPERFAMILY SSF51735 6 256 8.86E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_01040 3a4408ae49794ada4ed273b7a3dc0bcd 293 Pfam PF05368 NmrA-like family 8 227 1.1E-18 T 11-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 XFUD_10140 c3381a3c2340fab4df0546fa834b31ba 301 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XFUD_10140 c3381a3c2340fab4df0546fa834b31ba 301 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 285 7.6E-75 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XFUD_10140 c3381a3c2340fab4df0546fa834b31ba 301 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 283 5.0E-72 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XFUD_10140 c3381a3c2340fab4df0546fa834b31ba 301 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 289 19.423 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 XFUD_08935 aab501ee484c6209d479cf26771fb71a 97 Gene3D G3DSA:3.40.50.300 1 91 4.7E-19 T 11-10-2018 XFUD_08935 aab501ee484c6209d479cf26771fb71a 97 Pfam PF00437 Type II/IV secretion system protein 5 72 4.7E-16 T 11-10-2018 IPR001482 Type II/IV secretion system protein XFUD_08490 b52517b6ed91b8051f8b21f6c3d3bc92 291 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 206 282 8.4E-20 T 11-10-2018 IPR006260 TonB/TolA, C-terminal XFUD_08490 b52517b6ed91b8051f8b21f6c3d3bc92 291 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 204 273 2.2E-17 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 XFUD_08490 b52517b6ed91b8051f8b21f6c3d3bc92 291 SUPERFAMILY SSF74653 173 286 1.29E-21 T 11-10-2018 XFUD_08490 b52517b6ed91b8051f8b21f6c3d3bc92 291 Gene3D G3DSA:3.30.1150.10 77 281 1.0E-20 T 11-10-2018 XFUD_01885 8ab464d78e8914b70bc4ac4d61735500 287 Gene3D G3DSA:3.30.479.30 48 187 1.3E-15 T 11-10-2018 XFUD_01885 8ab464d78e8914b70bc4ac4d61735500 287 SUPERFAMILY SSF117892 51 190 3.27E-19 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily XFUD_01885 8ab464d78e8914b70bc4ac4d61735500 287 Pfam PF01145 SPFH domain / Band 7 family 23 201 3.3E-24 T 11-10-2018 IPR001107 Band 7 domain XFUD_01885 8ab464d78e8914b70bc4ac4d61735500 287 PIRSF PIRSF005651 1 287 3.2E-77 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 XFUD_01885 8ab464d78e8914b70bc4ac4d61735500 287 SMART SM00244 19 184 2.4E-17 T 11-10-2018 IPR001107 Band 7 domain XFUD_07285 6af6de55f8ea32a1e99f088495be4aea 381 Pfam PF04865 Baseplate J-like protein 73 223 5.5E-13 T 11-10-2018 IPR006949 Baseplate protein J-like XFUD_10605 d4cd7e74facd53298fce8e34125491f5 293 SUPERFAMILY SSF161098 54 280 5.49E-64 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_10605 d4cd7e74facd53298fce8e34125491f5 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 279 1.5E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 XFUD_10605 d4cd7e74facd53298fce8e34125491f5 293 Gene3D G3DSA:1.10.3720.10 50 291 1.8E-78 T 11-10-2018 IPR035906 MetI-like superfamily XFUD_10070 a055312ab90c3b4af770da5b790248f1 194 PIRSF PIRSF028438 1 183 7.4E-76 T 11-10-2018 IPR016884 Uncharacterised conserved protein UCP028438 XFUD_10625 85ea07503b1865f50dc2a9c328466582 302 Hamap MF_01805 Segregation and condensation protein A [scpA]. 47 278 22.443 T 11-10-2018 IPR003768 Segregation and condensation protein A XFUD_10625 85ea07503b1865f50dc2a9c328466582 302 Pfam PF02616 Segregation and condensation protein ScpA 64 275 2.8E-29 T 11-10-2018 IPR003768 Segregation and condensation protein A XFUD_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 6.3E-129 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 XFUD_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 Pfam PF00814 Glycoprotease family 29 311 2.1E-99 T 11-10-2018 IPR000905 Gcp-like domain XFUD_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 310 1.5E-111 T 11-10-2018 IPR017861 Kae1/TsaD family XFUD_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 Gene3D G3DSA:3.30.420.40 133 297 1.0E-122 T 11-10-2018 XFUD_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 SUPERFAMILY SSF53067 3 127 1.75E-29 T 11-10-2018 XFUD_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 62.553 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 XFUD_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 SUPERFAMILY SSF53067 105 313 7.77E-38 T 11-10-2018 XFUD_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 Gene3D G3DSA:3.30.420.40 3 319 1.0E-122 T 11-10-2018 XFUD_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 4.5E-52 T 11-10-2018 IPR017861 Kae1/TsaD family XFUD_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 4.5E-52 T 11-10-2018 IPR017861 Kae1/TsaD family XFUD_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 4.5E-52 T 11-10-2018 IPR017861 Kae1/TsaD family XFUD_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 179 4.5E-52 T 11-10-2018 IPR017861 Kae1/TsaD family XFUD_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 135 147 4.5E-52 T 11-10-2018 IPR017861 Kae1/TsaD family XFUD_01810 9fe22b9de8eea53c42a73f0a72594b1b 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 4.5E-52 T 11-10-2018 IPR017861 Kae1/TsaD family XFUD_09115 1f6da1f2c20fa0c62703327043d684c5 298 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 5 298 32.242 T 11-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 XFUD_09115 1f6da1f2c20fa0c62703327043d684c5 298 Pfam PF02649 Type I GTP cyclohydrolase folE2 6 293 4.0E-66 T 11-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 XFUD_03340 cb73c6ee2b142dcb69d839fc482cfdd2 244 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 30 244 28.137 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 XFUD_03340 cb73c6ee2b142dcb69d839fc482cfdd2 244 Pfam PF02390 Putative methyltransferase 70 239 3.7E-46 T 11-10-2018 XFUD_03340 cb73c6ee2b142dcb69d839fc482cfdd2 244 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 59 243 8.8E-42 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 XFUD_03340 cb73c6ee2b142dcb69d839fc482cfdd2 244 SUPERFAMILY SSF53335 21 241 1.95E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_03340 cb73c6ee2b142dcb69d839fc482cfdd2 244 Gene3D G3DSA:3.40.50.150 37 244 1.3E-57 T 11-10-2018 XFUD_02280 2b198b5166bbb959f8811e401ab547a2 186 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 9.4E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_02280 2b198b5166bbb959f8811e401ab547a2 186 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.8E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_02280 2b198b5166bbb959f8811e401ab547a2 186 Pfam PF00114 Pilin (bacterial filament) 35 175 9.0E-22 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 XFUD_02280 2b198b5166bbb959f8811e401ab547a2 186 SUPERFAMILY SSF54523 7 178 5.23E-23 T 11-10-2018 XFUD_02280 2b198b5166bbb959f8811e401ab547a2 186 Gene3D G3DSA:3.30.700.10 7 176 1.4E-21 T 11-10-2018 XFUD_03675 3dfe53febdf83357ae5f4a77347c0a4c 218 Gene3D G3DSA:2.40.160.20 34 218 9.0E-31 T 11-10-2018 XFUD_03675 3dfe53febdf83357ae5f4a77347c0a4c 218 SUPERFAMILY SSF56925 43 218 5.76E-17 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel XFUD_03675 3dfe53febdf83357ae5f4a77347c0a4c 218 Pfam PF03922 OmpW family 43 218 6.4E-53 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 XFUD_07920 19246a0416ba173e66c4c65191c54b60 220 Gene3D G3DSA:3.40.50.1820 1 220 4.2E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_07920 19246a0416ba173e66c4c65191c54b60 220 SUPERFAMILY SSF53474 12 216 2.54E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_07920 19246a0416ba173e66c4c65191c54b60 220 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 65 142 2.6E-5 T 11-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 XFUD_08185 00957ae32d09c0e68b2a6cfd806b7af7 243 Pfam PF04493 Endonuclease V 30 226 1.8E-68 T 11-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 XFUD_08185 00957ae32d09c0e68b2a6cfd806b7af7 243 Gene3D G3DSA:3.30.2170.10 10 238 1.5E-73 T 11-10-2018 XFUD_08185 00957ae32d09c0e68b2a6cfd806b7af7 243 Hamap MF_00801 Endonuclease V [nfi]. 20 235 34.151 T 11-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 XFUD_04710 107bd72f83861828f615f0cae37b7f71 384 SMART SM00448 28 143 7.8E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_04710 107bd72f83861828f615f0cae37b7f71 384 SUPERFAMILY SSF52172 28 183 4.41E-34 T 11-10-2018 IPR011006 CheY-like superfamily XFUD_04710 107bd72f83861828f615f0cae37b7f71 384 Pfam PF13487 HD domain 247 310 2.3E-18 T 11-10-2018 XFUD_04710 107bd72f83861828f615f0cae37b7f71 384 SUPERFAMILY SSF109604 170 357 2.63E-38 T 11-10-2018 XFUD_04710 107bd72f83861828f615f0cae37b7f71 384 SMART SM00471 195 329 3.1E-5 T 11-10-2018 IPR003607 HD/PDEase domain XFUD_04710 107bd72f83861828f615f0cae37b7f71 384 Pfam PF00072 Response regulator receiver domain 30 143 9.1E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 XFUD_04710 107bd72f83861828f615f0cae37b7f71 384 Gene3D G3DSA:1.10.3210.10 171 372 1.3E-66 T 11-10-2018 XFUD_04710 107bd72f83861828f615f0cae37b7f71 384 Gene3D G3DSA:3.40.50.2300 16 163 9.8E-33 T 11-10-2018 XFUD_00260 0184d15b9bcfc91ee644a4cedcffd335 299 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 20 297 7.8E-116 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 XFUD_00260 0184d15b9bcfc91ee644a4cedcffd335 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 77 99 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site XFUD_00260 0184d15b9bcfc91ee644a4cedcffd335 299 Gene3D G3DSA:1.20.120.1780 180 299 5.5E-8 T 11-10-2018 XFUD_00260 0184d15b9bcfc91ee644a4cedcffd335 299 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 15 298 28.633 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 XFUD_00260 0184d15b9bcfc91ee644a4cedcffd335 299 Gene3D G3DSA:1.10.357.140 35 179 8.0E-39 T 11-10-2018 XFUD_00260 0184d15b9bcfc91ee644a4cedcffd335 299 Pfam PF01040 UbiA prenyltransferase family 38 280 2.2E-58 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 XFUD_03045 d88630e1e1ae020f0f1e95d1d2e92315 91 SMART SM00530 13 66 2.1E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_03045 d88630e1e1ae020f0f1e95d1d2e92315 91 SUPERFAMILY SSF47413 9 88 9.39E-22 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_03045 d88630e1e1ae020f0f1e95d1d2e92315 91 Gene3D G3DSA:1.10.260.40 1 90 1.7E-28 T 11-10-2018 XFUD_03045 d88630e1e1ae020f0f1e95d1d2e92315 91 Pfam PF01381 Helix-turn-helix 15 64 3.3E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_03045 d88630e1e1ae020f0f1e95d1d2e92315 91 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 4 80 5.5E-29 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 XFUD_00880 bb2354af8e7a990bd2601b0f8334f2fc 223 PIRSF PIRSF001461 1 223 9.4E-101 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XFUD_00880 bb2354af8e7a990bd2601b0f8334f2fc 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 2.4E-96 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XFUD_00880 bb2354af8e7a990bd2601b0f8334f2fc 223 SUPERFAMILY SSF51366 1 216 6.73E-73 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XFUD_00880 bb2354af8e7a990bd2601b0f8334f2fc 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 8.1E-88 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XFUD_00880 bb2354af8e7a990bd2601b0f8334f2fc 223 Gene3D G3DSA:3.20.20.70 4 222 4.0E-81 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_00880 bb2354af8e7a990bd2601b0f8334f2fc 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XFUD_00880 bb2354af8e7a990bd2601b0f8334f2fc 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 XFUD_07220 6cb439a7e14f5f98665cf198eab13a94 145 Pfam PF11681 Protein of unknown function (DUF3277) 26 132 9.1E-10 T 11-10-2018 IPR021695 Bacteriophage rv5, Orf52 XFUD_06725 6cb439a7e14f5f98665cf198eab13a94 145 Pfam PF11681 Protein of unknown function (DUF3277) 26 132 9.1E-10 T 11-10-2018 IPR021695 Bacteriophage rv5, Orf52 XFUD_02580 1f54d80d57f043f3798bc0c81352bed4 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 5.2E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XFUD_02580 1f54d80d57f043f3798bc0c81352bed4 95 SUPERFAMILY SSF50129 1 94 1.53E-30 T 11-10-2018 IPR011032 GroES-like superfamily XFUD_02580 1f54d80d57f043f3798bc0c81352bed4 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 XFUD_02580 1f54d80d57f043f3798bc0c81352bed4 95 SMART SM00883 2 94 5.9E-50 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XFUD_02580 1f54d80d57f043f3798bc0c81352bed4 95 Gene3D G3DSA:2.30.33.40 1 95 7.4E-37 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 XFUD_02580 1f54d80d57f043f3798bc0c81352bed4 95 PRINTS PR00297 10kDa chaperonin signature 81 94 2.0E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XFUD_02580 1f54d80d57f043f3798bc0c81352bed4 95 PRINTS PR00297 10kDa chaperonin signature 3 18 2.0E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XFUD_02580 1f54d80d57f043f3798bc0c81352bed4 95 PRINTS PR00297 10kDa chaperonin signature 60 72 2.0E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XFUD_02580 1f54d80d57f043f3798bc0c81352bed4 95 PRINTS PR00297 10kDa chaperonin signature 25 46 2.0E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XFUD_02580 1f54d80d57f043f3798bc0c81352bed4 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 24.718 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 XFUD_10670 13af9c768a3508867cf6fcb27c7edcaa 153 Pfam PF03100 CcmE 4 127 6.4E-38 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 XFUD_10670 13af9c768a3508867cf6fcb27c7edcaa 153 Gene3D G3DSA:2.40.50.140 28 134 7.2E-33 T 11-10-2018 XFUD_10670 13af9c768a3508867cf6fcb27c7edcaa 153 SUPERFAMILY SSF82093 28 133 9.68E-34 T 11-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 XFUD_10670 13af9c768a3508867cf6fcb27c7edcaa 153 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 138 27.679 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 XFUD_03535 c359778e8832b4abd41c66c8c68c13b0 402 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 6 389 2.9E-125 T 11-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 XFUD_03535 c359778e8832b4abd41c66c8c68c13b0 402 Pfam PF01494 FAD binding domain 6 347 2.1E-33 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 XFUD_03535 c359778e8832b4abd41c66c8c68c13b0 402 Gene3D G3DSA:3.50.50.60 6 337 3.1E-82 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_03535 c359778e8832b4abd41c66c8c68c13b0 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 389 1.7E-104 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 XFUD_03535 c359778e8832b4abd41c66c8c68c13b0 402 Gene3D G3DSA:3.30.9.50 78 271 3.1E-82 T 11-10-2018 XFUD_03535 c359778e8832b4abd41c66c8c68c13b0 402 SUPERFAMILY SSF51905 6 378 9.15E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily XFUD_03535 c359778e8832b4abd41c66c8c68c13b0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 4.2E-20 T 11-10-2018 XFUD_03535 c359778e8832b4abd41c66c8c68c13b0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.2E-20 T 11-10-2018 XFUD_03535 c359778e8832b4abd41c66c8c68c13b0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 4.2E-20 T 11-10-2018 XFUD_03535 c359778e8832b4abd41c66c8c68c13b0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 4.2E-20 T 11-10-2018 XFUD_06530 a8ce16510a2a3b595350eb50f40bafaf 265 Gene3D G3DSA:3.40.50.720 1 265 1.0E-79 T 11-10-2018 XFUD_06530 a8ce16510a2a3b595350eb50f40bafaf 265 SUPERFAMILY SSF69572 8 260 9.55E-50 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 XFUD_06530 a8ce16510a2a3b595350eb50f40bafaf 265 Pfam PF00899 ThiF family 22 161 1.4E-28 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 XFUD_01725 14c748ced2201f40185e200b0fdec180 456 Gene3D G3DSA:1.20.120.20 44 201 2.3E-6 T 11-10-2018 XFUD_01725 14c748ced2201f40185e200b0fdec180 456 Pfam PF02646 RmuC family 144 434 1.2E-74 T 11-10-2018 IPR003798 DNA recombination RmuC XFUD_01725 14c748ced2201f40185e200b0fdec180 456 SUPERFAMILY SSF58113 36 186 1.83E-5 T 11-10-2018 XFUD_03565 9cfc0188dc8c86127eea216b1e8d0c56 507 Gene3D G3DSA:1.50.10.10 68 506 1.9E-165 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 XFUD_03565 9cfc0188dc8c86127eea216b1e8d0c56 507 SUPERFAMILY SSF48208 55 496 2.77E-165 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 XFUD_03565 9cfc0188dc8c86127eea216b1e8d0c56 507 Pfam PF06824 Metal-independent alpha-mannosidase (GH125) 84 486 4.0E-149 T 11-10-2018 IPR008313 Metal-independent alpha-mannosidase XFUD_03565 9cfc0188dc8c86127eea216b1e8d0c56 507 PIRSF PIRSF028846 62 497 8.3E-200 T 11-10-2018 IPR008313 Metal-independent alpha-mannosidase XFUD_03565 9cfc0188dc8c86127eea216b1e8d0c56 507 SMART SM01149 84 487 8.3E-244 T 11-10-2018 IPR008313 Metal-independent alpha-mannosidase XFUD_04830 e4a57c3d2adef3a4bec4f135f466dfc1 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 1.0E-39 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04830 e4a57c3d2adef3a4bec4f135f466dfc1 140 SUPERFAMILY SSF46604 88 135 5.49E-10 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04830 e4a57c3d2adef3a4bec4f135f466dfc1 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 87 131 3.2E-8 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain XFUD_04830 e4a57c3d2adef3a4bec4f135f466dfc1 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 3.1E-28 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04830 e4a57c3d2adef3a4bec4f135f466dfc1 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 132 1.1E-42 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04830 e4a57c3d2adef3a4bec4f135f466dfc1 140 SUPERFAMILY SSF51344 3 85 3.66E-23 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04830 e4a57c3d2adef3a4bec4f135f466dfc1 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 19.72 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_04830 e4a57c3d2adef3a4bec4f135f466dfc1 140 Gene3D G3DSA:2.60.15.10 1 138 8.6E-37 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 XFUD_07830 28a4963b443f7a6ac230c6692e12ead2 114 Pfam PF01230 HIT domain 12 108 5.5E-23 T 11-10-2018 IPR001310 Histidine triad (HIT) protein XFUD_07830 28a4963b443f7a6ac230c6692e12ead2 114 ProSitePatterns PS00892 HIT domain signature. 89 107 - T 11-10-2018 IPR019808 Histidine triad, conserved site XFUD_07830 28a4963b443f7a6ac230c6692e12ead2 114 PRINTS PR00332 Histidine triad family signature 27 45 5.4E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein XFUD_07830 28a4963b443f7a6ac230c6692e12ead2 114 PRINTS PR00332 Histidine triad family signature 96 106 5.4E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein XFUD_07830 28a4963b443f7a6ac230c6692e12ead2 114 PRINTS PR00332 Histidine triad family signature 6 22 5.4E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein XFUD_07830 28a4963b443f7a6ac230c6692e12ead2 114 SUPERFAMILY SSF54197 1 112 6.5E-33 T 11-10-2018 IPR036265 HIT-like superfamily XFUD_07830 28a4963b443f7a6ac230c6692e12ead2 114 Gene3D G3DSA:3.30.428.10 1 111 1.5E-31 T 11-10-2018 IPR036265 HIT-like superfamily XFUD_08830 9264b195723dab00bf1e739b4fa32c05 405 Pfam PF13480 Acetyltransferase (GNAT) domain 192 322 5.4E-8 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 XFUD_08830 9264b195723dab00bf1e739b4fa32c05 405 SUPERFAMILY SSF55729 181 353 1.3E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFUD_11220 2a335d2aee426be089992eba848dbe7d 96 Pfam PF13828 Domain of unknown function (DUF4190) 11 75 2.0E-22 T 11-10-2018 IPR025241 Domain of unknown function DUF4190 XFUD_02255 700913454c026681a4b953668fd6daad 95 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 8 86 1.7E-27 T 11-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system XFUD_02255 700913454c026681a4b953668fd6daad 95 Gene3D G3DSA:3.10.450.530 2 89 1.8E-18 T 11-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily XFUD_02870 0fd084ec35fa459b99fb1b2eeb725d79 188 Pfam PF10991 Protein of unknown function (DUF2815) 2 173 9.6E-48 T 11-10-2018 IPR022595 Protein of unknown function DUF2815 XFUD_02870 0fd084ec35fa459b99fb1b2eeb725d79 188 SUPERFAMILY SSF50249 6 169 6.34E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_02870 0fd084ec35fa459b99fb1b2eeb725d79 188 Gene3D G3DSA:2.40.50.140 1 172 1.8E-48 T 11-10-2018 XFUD_02865 0dd1e8479c6fe94169ae03cf921ba705 503 SMART SM01040 147 233 5.1E-40 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_02865 0dd1e8479c6fe94169ae03cf921ba705 503 SMART SM01040 15 103 1.4E-26 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_02865 0dd1e8479c6fe94169ae03cf921ba705 503 SMART SM01040 263 351 3.4E-37 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_02865 0dd1e8479c6fe94169ae03cf921ba705 503 Pfam PF02498 BRO family, N-terminal domain 148 233 1.5E-23 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_02865 0dd1e8479c6fe94169ae03cf921ba705 503 Pfam PF02498 BRO family, N-terminal domain 16 103 3.5E-15 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_02865 0dd1e8479c6fe94169ae03cf921ba705 503 Pfam PF02498 BRO family, N-terminal domain 264 351 1.7E-25 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_04455 96d3e47185ffead0da3bf63cc8e1f10c 284 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 240 266 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 XFUD_04455 96d3e47185ffead0da3bf63cc8e1f10c 284 Pfam PF01148 Cytidylyltransferase family 4 279 6.8E-71 T 11-10-2018 XFUD_01180 bcaabbe94c2757858405f60a46724593 219 Gene3D G3DSA:1.10.510.10 48 187 1.1E-6 T 11-10-2018 XFUD_01180 bcaabbe94c2757858405f60a46724593 219 Pfam PF01636 Phosphotransferase enzyme family 100 155 2.5E-5 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase XFUD_01180 bcaabbe94c2757858405f60a46724593 219 SUPERFAMILY SSF56112 31 149 1.61E-16 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily XFUD_06690 cd94a09adf630c7c26868a26500b80b4 327 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 84 327 3.1E-77 T 11-10-2018 IPR020049 Protein of unknown function DUF2184 XFUD_06690 cd94a09adf630c7c26868a26500b80b4 327 PIRSF PIRSF029202 22 327 1.3E-132 T 11-10-2018 IPR020049 Protein of unknown function DUF2184 XFUD_07185 cd94a09adf630c7c26868a26500b80b4 327 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 84 327 3.1E-77 T 11-10-2018 IPR020049 Protein of unknown function DUF2184 XFUD_07185 cd94a09adf630c7c26868a26500b80b4 327 PIRSF PIRSF029202 22 327 1.3E-132 T 11-10-2018 IPR020049 Protein of unknown function DUF2184 XFUD_12425 c628a7529c9032aa0dbc21dbe21b3922 150 Gene3D G3DSA:3.30.70.240 2 100 5.6E-18 T 11-10-2018 XFUD_12425 c628a7529c9032aa0dbc21dbe21b3922 150 Pfam PF09827 CRISPR associated protein Cas2 3 90 1.7E-7 T 11-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 XFUD_06195 0cac7ddaf727cb690f37876cc826d3b6 381 SUPERFAMILY SSF53756 7 375 9.68E-64 T 11-10-2018 XFUD_06195 0cac7ddaf727cb690f37876cc826d3b6 381 Pfam PF13439 Glycosyltransferase Family 4 18 161 6.5E-11 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 XFUD_06195 0cac7ddaf727cb690f37876cc826d3b6 381 Gene3D G3DSA:3.40.50.2000 2 166 1.1E-11 T 11-10-2018 XFUD_06195 0cac7ddaf727cb690f37876cc826d3b6 381 Gene3D G3DSA:3.40.50.2000 174 353 2.4E-42 T 11-10-2018 XFUD_06195 0cac7ddaf727cb690f37876cc826d3b6 381 Pfam PF00534 Glycosyl transferases group 1 188 349 9.4E-31 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 XFUD_02275 c893f74a51def77839d0d2246998de29 127 Pfam PF13274 Protein of unknown function (DUF4065) 2 80 9.2E-7 T 11-10-2018 IPR025272 Domain of unknown function DUF4065 XFUD_08475 d73f7644c47679d1599b1eeaad8d70ed 176 Gene3D G3DSA:2.30.30.40 45 155 1.6E-15 T 11-10-2018 XFUD_08475 d73f7644c47679d1599b1eeaad8d70ed 176 SMART SM00260 29 166 5.7E-5 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XFUD_08475 d73f7644c47679d1599b1eeaad8d70ed 176 SUPERFAMILY SSF50341 26 170 8.72E-27 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 XFUD_08475 d73f7644c47679d1599b1eeaad8d70ed 176 Pfam PF01584 CheW-like domain 35 166 5.8E-24 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 XFUD_08475 d73f7644c47679d1599b1eeaad8d70ed 176 Gene3D G3DSA:2.40.50.180 52 118 1.6E-15 T 11-10-2018 XFUD_10210 26d34be70db4c6b91b1717e0fc3c059c 732 SUPERFAMILY SSF103515 485 732 5.1E-26 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFUD_10210 26d34be70db4c6b91b1717e0fc3c059c 732 SMART SM00869 474 721 1.1E-5 T 11-10-2018 IPR005546 Autotransporter beta-domain XFUD_10210 26d34be70db4c6b91b1717e0fc3c059c 732 Gene3D G3DSA:2.40.128.130 456 732 7.1E-15 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily XFUD_04420 b4c7561f2d08948457721daed09030d0 385 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 383 42.793 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XFUD_04420 b4c7561f2d08948457721daed09030d0 385 SUPERFAMILY SSF53756 6 382 1.96E-31 T 11-10-2018 XFUD_04420 b4c7561f2d08948457721daed09030d0 385 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 2 381 4.7E-112 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XFUD_04420 b4c7561f2d08948457721daed09030d0 385 Pfam PF02684 Lipid-A-disaccharide synthetase 7 378 5.9E-111 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 XFUD_02250 68b94b97a920fd4d2b29d1cee26eff0a 105 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 21 97 3.1E-18 T 11-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system XFUD_06595 61984e4be6fbbe5cb7656bfed4e70b5c 295 Pfam PF07120 Protein of unknown function (DUF1376) 2 85 8.9E-32 T 11-10-2018 IPR010781 Protein of unknown function DUF1376 XFUD_04580 018ca9591a13bb76da17bcd3f9a300f3 413 Pfam PF02687 FtsX-like permease family 300 406 5.5E-13 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 XFUD_04580 018ca9591a13bb76da17bcd3f9a300f3 413 Pfam PF12704 MacB-like periplasmic core domain 28 226 2.5E-14 T 11-10-2018 IPR025857 MacB-like periplasmic core domain XFUD_04580 018ca9591a13bb76da17bcd3f9a300f3 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 2.9E-141 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 XFUD_00570 8634adb8317fb8bd813a288b1143549b 361 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 349 9.0E-70 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 XFUD_00570 8634adb8317fb8bd813a288b1143549b 361 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 349 9.1E-110 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 XFUD_07590 3fde639d10a4cf951622e3e29d5985eb 444 Pfam PF07690 Major Facilitator Superfamily 4 393 4.5E-57 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 XFUD_07590 3fde639d10a4cf951622e3e29d5985eb 444 Gene3D G3DSA:1.20.1720.10 1 246 6.3E-44 T 11-10-2018 XFUD_07590 3fde639d10a4cf951622e3e29d5985eb 444 Gene3D G3DSA:1.20.1250.20 247 436 2.0E-23 T 11-10-2018 XFUD_07590 3fde639d10a4cf951622e3e29d5985eb 444 SUPERFAMILY SSF103473 1 433 1.44E-62 T 11-10-2018 IPR036259 MFS transporter superfamily XFUD_07590 3fde639d10a4cf951622e3e29d5985eb 444 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 2 403 5.1E-71 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 XFUD_05580 cf05c79b076312e0f1e7311169aec3f0 395 SUPERFAMILY SSF55136 299 370 6.28E-5 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily XFUD_05580 cf05c79b076312e0f1e7311169aec3f0 395 Gene3D G3DSA:3.20.80.10 301 380 2.9E-5 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily XFUD_08270 290a003a2a2870f9ba75ddea88a01a7e 397 Pfam PF00448 SRP54-type protein, GTPase domain 189 390 1.3E-71 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFUD_08270 290a003a2a2870f9ba75ddea88a01a7e 397 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 364 377 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFUD_08270 290a003a2a2870f9ba75ddea88a01a7e 397 SMART SM00962 189 391 2.1E-109 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFUD_08270 290a003a2a2870f9ba75ddea88a01a7e 397 SMART SM00963 95 174 2.0E-16 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFUD_08270 290a003a2a2870f9ba75ddea88a01a7e 397 Gene3D G3DSA:3.40.50.300 178 379 5.3E-102 T 11-10-2018 XFUD_08270 290a003a2a2870f9ba75ddea88a01a7e 397 Gene3D G3DSA:1.20.120.140 112 389 5.3E-102 T 11-10-2018 XFUD_08270 290a003a2a2870f9ba75ddea88a01a7e 397 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 118 390 8.4E-99 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 XFUD_08270 290a003a2a2870f9ba75ddea88a01a7e 397 SMART SM00382 188 367 1.3E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_08270 290a003a2a2870f9ba75ddea88a01a7e 397 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 117 391 59.839 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 XFUD_08270 290a003a2a2870f9ba75ddea88a01a7e 397 SUPERFAMILY SSF52540 140 389 9.15E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_08270 290a003a2a2870f9ba75ddea88a01a7e 397 Pfam PF02881 SRP54-type protein, helical bundle domain 105 170 2.6E-12 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 XFUD_07985 fe42fec408addac8764cf5a7e3d2b9a0 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 XFUD_07985 fe42fec408addac8764cf5a7e3d2b9a0 112 SUPERFAMILY SSF54913 1 112 3.11E-44 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta XFUD_07985 fe42fec408addac8764cf5a7e3d2b9a0 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.2E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XFUD_07985 fe42fec408addac8764cf5a7e3d2b9a0 112 PIRSF PIRSF039144 1 112 1.8E-52 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XFUD_07985 fe42fec408addac8764cf5a7e3d2b9a0 112 SMART SM00938 4 105 2.9E-61 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XFUD_07985 fe42fec408addac8764cf5a7e3d2b9a0 112 PRINTS PR00340 P-II protein signature 83 103 1.7E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XFUD_07985 fe42fec408addac8764cf5a7e3d2b9a0 112 PRINTS PR00340 P-II protein signature 2 17 1.7E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XFUD_07985 fe42fec408addac8764cf5a7e3d2b9a0 112 PRINTS PR00340 P-II protein signature 52 75 1.7E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XFUD_07985 fe42fec408addac8764cf5a7e3d2b9a0 112 PRINTS PR00340 P-II protein signature 23 41 1.7E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 XFUD_07985 fe42fec408addac8764cf5a7e3d2b9a0 112 Gene3D G3DSA:3.30.70.120 1 112 2.1E-44 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal XFUD_00835 a8e9308ec455e334ae1f09c24dbac527 174 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 98 154 3.5E-15 T 11-10-2018 IPR018637 Domain of unknown function DUF2059 XFUD_07975 7b64e5a1166d0c21d585cdd1cfc64c8d 261 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 260 16.288 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 XFUD_07975 7b64e5a1166d0c21d585cdd1cfc64c8d 261 Pfam PF02673 Bacitracin resistance protein BacA 7 255 3.8E-70 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 XFUD_10185 a009a8f606a115299faefd1738d78976 136 Pfam PF01475 Ferric uptake regulator family 9 129 1.2E-41 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 XFUD_10185 a009a8f606a115299faefd1738d78976 136 SUPERFAMILY SSF46785 4 131 2.25E-37 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_10185 a009a8f606a115299faefd1738d78976 136 Gene3D G3DSA:1.10.10.10 1 82 4.5E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_10185 a009a8f606a115299faefd1738d78976 136 Gene3D G3DSA:3.30.1490.190 85 136 9.2E-16 T 11-10-2018 XFUD_07675 b6cd84354e9dcd392d9848b3b2d38eec 249 Pfam PF08900 Domain of unknown function (DUF1845) 12 211 2.5E-67 T 11-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 XFUD_07675 b6cd84354e9dcd392d9848b3b2d38eec 249 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 13 214 5.1E-77 T 11-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 XFUD_00415 889786debb5896c3e416c481119440bd 65 Gene3D G3DSA:2.60.260.40 9 63 1.8E-10 T 11-10-2018 XFUD_00415 889786debb5896c3e416c481119440bd 65 Pfam PF10276 Zinc-finger domain 36 61 4.7E-8 T 11-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_10020 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 301 320 5.5E-54 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFUD_10020 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 153 172 5.5E-54 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFUD_10020 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 271 286 5.5E-54 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFUD_10020 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 192 211 5.5E-54 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFUD_10020 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 5.5E-54 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFUD_10020 1a466fea7b330498c0445896fc4cb9fb 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 246 262 5.5E-54 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFUD_10020 1a466fea7b330498c0445896fc4cb9fb 334 Gene3D G3DSA:3.20.20.70 1 331 3.2E-139 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_10020 1a466fea7b330498c0445896fc4cb9fb 334 SUPERFAMILY SSF51569 2 329 3.37E-138 T 11-10-2018 XFUD_10020 1a466fea7b330498c0445896fc4cb9fb 334 PIRSF PIRSF001415 1 330 1.5E-150 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFUD_10020 1a466fea7b330498c0445896fc4cb9fb 334 SMART SM01004 3 327 1.5E-231 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFUD_10020 1a466fea7b330498c0445896fc4cb9fb 334 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 326 3.3E-134 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 XFUD_06290 1350e2d4852db8d9ede3af96b84e3f75 159 Gene3D G3DSA:1.10.10.10 1 159 4.8E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily XFUD_06290 1350e2d4852db8d9ede3af96b84e3f75 159 Pfam PF01047 MarR family 46 101 7.4E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_06290 1350e2d4852db8d9ede3af96b84e3f75 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 3.4E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_06290 1350e2d4852db8d9ede3af96b84e3f75 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 3.4E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_06290 1350e2d4852db8d9ede3af96b84e3f75 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 3.4E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_06290 1350e2d4852db8d9ede3af96b84e3f75 159 SMART SM00347 37 137 1.0E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 XFUD_06290 1350e2d4852db8d9ede3af96b84e3f75 159 SUPERFAMILY SSF46785 10 149 2.65E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily XFUD_05540 3f5238692583a856da8fb1adf3caf557 346 SUPERFAMILY SSF111337 4 339 2.75E-130 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XFUD_05540 3f5238692583a856da8fb1adf3caf557 346 Pfam PF02547 Queuosine biosynthesis protein 4 338 2.0E-127 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XFUD_05540 3f5238692583a856da8fb1adf3caf557 346 Gene3D G3DSA:3.40.1780.10 14 338 5.2E-113 T 11-10-2018 XFUD_05540 3f5238692583a856da8fb1adf3caf557 346 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 339 46.319 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XFUD_05540 3f5238692583a856da8fb1adf3caf557 346 Gene3D G3DSA:2.40.10.240 64 161 5.2E-113 T 11-10-2018 XFUD_05540 3f5238692583a856da8fb1adf3caf557 346 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 338 1.6E-126 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 XFUD_07835 8c899a7e8d92201cd5db04ff8fbddfe9 173 PIRSF PIRSF004982 1 173 2.5E-44 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 XFUD_07835 8c899a7e8d92201cd5db04ff8fbddfe9 173 Pfam PF03843 Outer membrane lipoprotein Slp family 15 171 9.7E-42 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 XFUD_10250 e16ddd716d0b6eeb3941cbb7812de431 257 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 73 239 1.1E-31 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 XFUD_10250 e16ddd716d0b6eeb3941cbb7812de431 257 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 75 238 7.5E-51 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 XFUD_10115 4059bdd666cf770afb3063982f358cbc 394 Pfam PF12679 ABC-2 family transporter protein 8 356 1.4E-23 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 XFUD_00785 c50fa9f6b48fa62586c69cfdbb95683d 143 Pfam PF01957 NfeD-like C-terminal, partner-binding 8 142 1.9E-24 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain XFUD_08770 c4b7ab1e6387e9a5c84534ee5711a2ef 332 Pfam PF12706 Beta-lactamase superfamily domain 84 285 2.7E-39 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFUD_08770 c4b7ab1e6387e9a5c84534ee5711a2ef 332 Gene3D G3DSA:3.60.15.10 33 332 1.1E-75 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFUD_08770 c4b7ab1e6387e9a5c84534ee5711a2ef 332 SUPERFAMILY SSF56281 68 297 6.68E-32 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFUD_08770 c4b7ab1e6387e9a5c84534ee5711a2ef 332 PIRSF PIRSF038896 8 330 4.4E-98 T 11-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 XFUD_02115 b8b2058954f34f73ca4ba0b3653ba0be 488 Pfam PF05272 Virulence-associated protein E 136 335 1.7E-82 T 11-10-2018 IPR007936 Virulence-associated E XFUD_02960 fd760a00fd08de4c4f9583adbb9c16de 844 SMART SM00885 373 532 1.6E-49 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XFUD_02960 fd760a00fd08de4c4f9583adbb9c16de 844 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 481 803 2.5E-80 T 11-10-2018 IPR006500 DNA primase, phage/plasmid XFUD_02960 fd760a00fd08de4c4f9583adbb9c16de 844 Pfam PF08706 D5 N terminal like 374 531 6.8E-35 T 11-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal XFUD_02960 fd760a00fd08de4c4f9583adbb9c16de 844 Pfam PF03288 Poxvirus D5 protein-like 752 819 2.6E-6 T 11-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal XFUD_02960 fd760a00fd08de4c4f9583adbb9c16de 844 SUPERFAMILY SSF52540 528 690 4.63E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_02550 1cbbb758daf5595f1e3aafd13f22c6a0 314 SUPERFAMILY SSF51735 3 313 4.48E-91 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_02550 1cbbb758daf5595f1e3aafd13f22c6a0 314 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 306 1.6E-53 T 11-10-2018 IPR016040 NAD(P)-binding domain XFUD_02550 1cbbb758daf5595f1e3aafd13f22c6a0 314 Gene3D G3DSA:3.90.25.10 187 310 1.0E-107 T 11-10-2018 XFUD_02550 1cbbb758daf5595f1e3aafd13f22c6a0 314 Gene3D G3DSA:3.40.50.720 7 297 1.0E-107 T 11-10-2018 XFUD_09340 71a6ac056c1099ca9cbd534f0c69eaca 249 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 40 241 7.7E-75 T 11-10-2018 XFUD_09340 71a6ac056c1099ca9cbd534f0c69eaca 249 Gene3D G3DSA:1.10.510.10 148 246 6.1E-11 T 11-10-2018 XFUD_09340 71a6ac056c1099ca9cbd534f0c69eaca 249 SUPERFAMILY SSF56112 46 219 2.29E-19 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily XFUD_09340 71a6ac056c1099ca9cbd534f0c69eaca 249 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 10 243 39.203 T 11-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 XFUD_08980 9bcb2cfe73dcea1e7a65606fcb4eea7e 102 Gene3D G3DSA:3.30.2310.20 8 102 4.4E-28 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XFUD_08980 9bcb2cfe73dcea1e7a65606fcb4eea7e 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 10 100 2.5E-20 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XFUD_08980 9bcb2cfe73dcea1e7a65606fcb4eea7e 102 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 9 99 5.9E-9 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XFUD_06440 8fba4537a6fa3d2a1464b66447446c69 281 Pfam PF03934 Type II secretion system (T2SS), protein K 31 262 3.1E-46 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 XFUD_06440 8fba4537a6fa3d2a1464b66447446c69 281 SUPERFAMILY SSF158544 96 192 3.92E-25 T 11-10-2018 IPR038072 GspK, central domain superfamily XFUD_06440 8fba4537a6fa3d2a1464b66447446c69 281 Gene3D G3DSA:1.10.40.60 90 193 5.2E-19 T 11-10-2018 IPR038072 GspK, central domain superfamily XFUD_06440 8fba4537a6fa3d2a1464b66447446c69 281 PIRSF PIRSF002786 2 277 2.2E-40 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 XFUD_05885 f54901dee572b9d50e2cc59dbc0e0d29 250 Gene3D G3DSA:3.10.580.10 77 204 1.8E-34 T 11-10-2018 XFUD_05885 f54901dee572b9d50e2cc59dbc0e0d29 250 SUPERFAMILY SSF158791 2 78 1.06E-15 T 11-10-2018 XFUD_05885 f54901dee572b9d50e2cc59dbc0e0d29 250 Gene3D G3DSA:1.25.60.10 1 76 1.4E-6 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily XFUD_05885 f54901dee572b9d50e2cc59dbc0e0d29 250 SMART SM00924 1 81 6.6E-12 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain XFUD_05885 f54901dee572b9d50e2cc59dbc0e0d29 250 SUPERFAMILY SSF54631 80 218 1.3E-23 T 11-10-2018 XFUD_05885 f54901dee572b9d50e2cc59dbc0e0d29 250 Pfam PF00571 CBS domain 81 138 0.0037 T 11-10-2018 IPR000644 CBS domain XFUD_05885 f54901dee572b9d50e2cc59dbc0e0d29 250 Pfam PF00571 CBS domain 156 199 0.0037 T 11-10-2018 IPR000644 CBS domain XFUD_05885 f54901dee572b9d50e2cc59dbc0e0d29 250 Pfam PF03448 MgtE intracellular N domain 1 79 2.4E-16 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain XFUD_06930 08ff46c64d97b9a1dc052056dadfe12d 280 Pfam PF00535 Glycosyl transferase family 2 8 150 5.6E-18 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XFUD_06930 08ff46c64d97b9a1dc052056dadfe12d 280 SUPERFAMILY SSF53448 7 254 1.37E-39 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_06930 08ff46c64d97b9a1dc052056dadfe12d 280 Gene3D G3DSA:3.90.550.10 3 228 2.3E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_11580 0a06309fe6e07880b703db71b4d62ff5 175 Gene3D G3DSA:3.40.50.1820 1 175 2.5E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_11580 0a06309fe6e07880b703db71b4d62ff5 175 SUPERFAMILY SSF53474 4 172 6.34E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_02520 1e0d537fa0f3b90957d94a5c98995638 72 Pfam PF04325 Protein of unknown function (DUF465) 20 60 4.4E-9 T 11-10-2018 IPR007420 Protein of unknown function DUF465 XFUD_02520 1e0d537fa0f3b90957d94a5c98995638 72 Gene3D G3DSA:1.20.58.660 1 71 2.9E-6 T 11-10-2018 XFUD_06045 34a68da9df81eb261079805c521f4cda 260 Gene3D G3DSA:3.40.30.10 68 258 2.0E-48 T 11-10-2018 XFUD_06045 34a68da9df81eb261079805c521f4cda 260 SUPERFAMILY SSF52833 74 251 1.87E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily XFUD_06045 34a68da9df81eb261079805c521f4cda 260 Pfam PF01323 DSBA-like thioredoxin domain 95 239 4.4E-10 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 XFUD_08730 bee0b100e6489be0837abb8927262ca3 155 SUPERFAMILY SSF88697 2 154 1.24E-58 T 11-10-2018 IPR015947 PUA-like superfamily XFUD_08730 bee0b100e6489be0837abb8927262ca3 155 Pfam PF01878 EVE domain 6 153 3.1E-53 T 11-10-2018 IPR002740 EVE domain XFUD_08730 bee0b100e6489be0837abb8927262ca3 155 Gene3D G3DSA:3.10.590.10 1 155 1.5E-62 T 11-10-2018 XFUD_06175 91159ca9fbe8c1fc4443e45676e1d27a 385 Gene3D G3DSA:2.30.40.10 14 382 3.7E-125 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XFUD_06175 91159ca9fbe8c1fc4443e45676e1d27a 385 Gene3D G3DSA:3.20.20.140 63 350 3.7E-125 T 11-10-2018 XFUD_06175 91159ca9fbe8c1fc4443e45676e1d27a 385 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 10 382 1.2E-99 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 XFUD_06175 91159ca9fbe8c1fc4443e45676e1d27a 385 PIRSF PIRSF038994 8 384 2.8E-113 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 XFUD_06175 91159ca9fbe8c1fc4443e45676e1d27a 385 Pfam PF01979 Amidohydrolase family 59 382 2.1E-28 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 XFUD_06175 91159ca9fbe8c1fc4443e45676e1d27a 385 SUPERFAMILY SSF51338 11 382 6.48E-12 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 XFUD_06175 91159ca9fbe8c1fc4443e45676e1d27a 385 SUPERFAMILY SSF51556 62 356 5.51E-99 T 11-10-2018 IPR032466 Metal-dependent hydrolase XFUD_06385 d3d14ad0ecea70628cc62592b3cde94a 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 177 183 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 XFUD_06385 d3d14ad0ecea70628cc62592b3cde94a 275 Pfam PF05175 Methyltransferase small domain 99 186 1.6E-18 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 XFUD_06385 d3d14ad0ecea70628cc62592b3cde94a 275 SUPERFAMILY SSF53335 14 270 2.74E-55 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_06385 d3d14ad0ecea70628cc62592b3cde94a 275 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 272 43.01 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 XFUD_06385 d3d14ad0ecea70628cc62592b3cde94a 275 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 19 268 1.9E-88 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 XFUD_06385 d3d14ad0ecea70628cc62592b3cde94a 275 Gene3D G3DSA:1.10.8.10 5 80 5.6E-19 T 11-10-2018 XFUD_06385 d3d14ad0ecea70628cc62592b3cde94a 275 Gene3D G3DSA:3.40.50.150 83 272 6.8E-60 T 11-10-2018 XFUD_06385 d3d14ad0ecea70628cc62592b3cde94a 275 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 10 271 7.1E-73 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 XFUD_06620 b160644a71e393dfcb3bdf6afcd7ab8a 112 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 28 105 1.2E-22 T 11-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system XFUD_00435 6e87edf010fccf347f45c4efe8723c52 436 Gene3D G3DSA:3.40.50.11720 40 217 3.7E-45 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 XFUD_00435 6e87edf010fccf347f45c4efe8723c52 436 Gene3D G3DSA:3.40.50.2000 231 411 1.2E-62 T 11-10-2018 XFUD_00435 6e87edf010fccf347f45c4efe8723c52 436 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 42 219 1.9E-62 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 XFUD_00435 6e87edf010fccf347f45c4efe8723c52 436 SUPERFAMILY SSF53756 65 410 3.98E-15 T 11-10-2018 XFUD_10645 5eaee28181ed019aa21f6740812273fc 269 Pfam PF00795 Carbon-nitrogen hydrolase 6 230 1.4E-24 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 XFUD_10645 5eaee28181ed019aa21f6740812273fc 269 SUPERFAMILY SSF56317 1 255 1.02E-53 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XFUD_10645 5eaee28181ed019aa21f6740812273fc 269 Gene3D G3DSA:3.60.110.10 1 266 7.1E-92 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily XFUD_09785 314ae480f68020f07675c5a38d0afa62 125 Pfam PF16137 Domain of unknown function (DUF4845) 33 113 3.7E-19 T 11-10-2018 IPR032314 Protein of unknown function DUF4845 XFUD_07705 d97bf67bbf612713f73bbfd04948b280 291 SUPERFAMILY SSF52540 1 266 1.15E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_07705 d97bf67bbf612713f73bbfd04948b280 291 Pfam PF13614 AAA domain 1 168 9.4E-26 T 11-10-2018 IPR025669 AAA domain XFUD_07705 d97bf67bbf612713f73bbfd04948b280 291 Gene3D G3DSA:3.40.50.300 1 269 1.2E-47 T 11-10-2018 XFUD_05495 7ea9487388396d30619ec90af2e4d308 372 Pfam PF02405 Permease MlaE 156 364 6.4E-68 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 XFUD_05495 7ea9487388396d30619ec90af2e4d308 372 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 128 368 3.9E-69 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria XFUD_12180 c597788b392830f19c3dba4e5744fdc5 122 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 10 92 2.6E-25 T 11-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB XFUD_07670 1613c7bc15993c1c564e6c0793f3a2b3 177 Pfam PF11358 Protein of unknown function (DUF3158) 11 167 1.1E-70 T 11-10-2018 IPR021502 Protein of unknown function DUF3158 XFUD_01595 ed39122e902241af70270880b3e993dc 204 Pfam PF02581 Thiamine monophosphate synthase 7 185 2.6E-50 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XFUD_01595 ed39122e902241af70270880b3e993dc 204 SUPERFAMILY SSF51391 4 201 4.32E-54 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XFUD_01595 ed39122e902241af70270880b3e993dc 204 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 5 203 23.857 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XFUD_01595 ed39122e902241af70270880b3e993dc 204 Gene3D G3DSA:3.20.20.70 1 203 1.5E-52 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_01595 ed39122e902241af70270880b3e993dc 204 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 7 196 1.4E-58 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XFUD_02265 c27c13070dce23f28919391fb52f1e64 114 SUPERFAMILY SSF46955 5 39 5.95E-5 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily XFUD_02265 c27c13070dce23f28919391fb52f1e64 114 Gene3D G3DSA:1.10.1660.10 4 40 2.3E-5 T 11-10-2018 XFUD_10120 5309501cb1ed1118873d3197e8ab8629 248 SMART SM00382 30 213 1.3E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain XFUD_10120 5309501cb1ed1118873d3197e8ab8629 248 Gene3D G3DSA:3.40.50.300 1 245 4.4E-66 T 11-10-2018 XFUD_10120 5309501cb1ed1118873d3197e8ab8629 248 Pfam PF00005 ABC transporter 22 165 6.1E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 XFUD_10120 5309501cb1ed1118873d3197e8ab8629 248 SUPERFAMILY SSF52540 2 226 9.85E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_10120 5309501cb1ed1118873d3197e8ab8629 248 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 XFUD_03695 a42f93062f371a6a7a1593f57b2accb7 239 SUPERFAMILY SSF88713 22 215 7.51E-42 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XFUD_03695 a42f93062f371a6a7a1593f57b2accb7 239 Pfam PF01522 Polysaccharide deacetylase 57 194 2.2E-32 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XFUD_03695 a42f93062f371a6a7a1593f57b2accb7 239 Gene3D G3DSA:3.20.20.370 1 228 1.2E-55 T 11-10-2018 XFUD_08095 7612f8dd1813201d55247686a08ff110 356 Gene3D G3DSA:3.40.50.300 1 188 4.6E-45 T 11-10-2018 XFUD_08095 7612f8dd1813201d55247686a08ff110 356 Pfam PF05707 Zonular occludens toxin (Zot) 1 187 1.4E-54 T 11-10-2018 IPR008900 Zona occludens toxin XFUD_11780 f91daf40e85765125fea4ce01a55e141 868 SUPERFAMILY SSF56935 25 868 9.39E-95 T 11-10-2018 XFUD_11780 f91daf40e85765125fea4ce01a55e141 868 Pfam PF00593 TonB dependent receptor 403 867 2.5E-42 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel XFUD_11780 f91daf40e85765125fea4ce01a55e141 868 Gene3D G3DSA:2.170.130.10 26 170 1.0E-15 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily XFUD_11780 f91daf40e85765125fea4ce01a55e141 868 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 34 868 1.3E-233 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor XFUD_11780 f91daf40e85765125fea4ce01a55e141 868 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 165 2.3E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain XFUD_11780 f91daf40e85765125fea4ce01a55e141 868 Gene3D G3DSA:2.40.170.20 248 868 1.6E-50 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily XFUD_05535 dac68daddcd321c025192d9794fc6e88 373 Pfam PF01098 Cell cycle protein 23 369 1.2E-97 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_05535 dac68daddcd321c025192d9794fc6e88 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 14 371 26.914 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_05535 dac68daddcd321c025192d9794fc6e88 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 326 350 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_05535 dac68daddcd321c025192d9794fc6e88 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 368 2.8E-117 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_10375 23204803407d277c4af4bdbcf8a5b3b1 424 Pfam PF00155 Aminotransferase class I and II 39 399 1.8E-45 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 XFUD_10375 23204803407d277c4af4bdbcf8a5b3b1 424 Gene3D G3DSA:3.90.1150.10 28 402 5.1E-117 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 XFUD_10375 23204803407d277c4af4bdbcf8a5b3b1 424 SUPERFAMILY SSF53383 12 405 2.42E-87 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase XFUD_10375 23204803407d277c4af4bdbcf8a5b3b1 424 Gene3D G3DSA:3.40.640.10 58 299 5.1E-117 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 XFUD_04210 5677d53ede54757df1f6689252ec610e 94 Gene3D G3DSA:3.30.70.20 2 81 2.2E-30 T 11-10-2018 XFUD_04210 5677d53ede54757df1f6689252ec610e 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XFUD_04210 5677d53ede54757df1f6689252ec610e 94 SUPERFAMILY SSF54862 7 67 2.54E-18 T 11-10-2018 XFUD_04210 5677d53ede54757df1f6689252ec610e 94 Pfam PF00037 4Fe-4S binding domain 7 25 4.9E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XFUD_00685 2b8224bf9bedad84fea5c02fdaecef18 381 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 14 381 42.703 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 XFUD_00685 2b8224bf9bedad84fea5c02fdaecef18 381 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 15 381 5.4E-171 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 XFUD_00685 2b8224bf9bedad84fea5c02fdaecef18 381 Gene3D G3DSA:3.30.420.40 159 341 4.4E-129 T 11-10-2018 XFUD_00685 2b8224bf9bedad84fea5c02fdaecef18 381 SUPERFAMILY SSF53067 15 355 8.51E-27 T 11-10-2018 XFUD_00685 2b8224bf9bedad84fea5c02fdaecef18 381 Gene3D G3DSA:3.30.420.40 21 376 4.4E-129 T 11-10-2018 XFUD_07280 817229971e02d74be8ff29cdda06c70a 100 PIRSF PIRSF028744 1 100 3.5E-41 T 11-10-2018 IPR014056 Addiction module killer protein, predicted XFUD_07280 817229971e02d74be8ff29cdda06c70a 100 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 90 5.1E-7 T 11-10-2018 IPR009241 Toxin HigB-like XFUD_07280 817229971e02d74be8ff29cdda06c70a 100 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 4 94 1.8E-41 T 11-10-2018 IPR014056 Addiction module killer protein, predicted XFUD_09345 46311424260c09d38912380e4cb40a5a 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 82 314 3.3E-43 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 XFUD_09345 46311424260c09d38912380e4cb40a5a 350 SUPERFAMILY SSF53756 8 343 2.2E-73 T 11-10-2018 XFUD_09345 46311424260c09d38912380e4cb40a5a 350 Gene3D G3DSA:3.40.50.2000 3 154 9.5E-20 T 11-10-2018 XFUD_09345 46311424260c09d38912380e4cb40a5a 350 Gene3D G3DSA:3.40.50.2000 160 342 1.8E-35 T 11-10-2018 XFUD_10660 c6fadc41901e36ffceb8a528ff300514 231 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 17 227 1.9E-60 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria XFUD_10660 c6fadc41901e36ffceb8a528ff300514 231 PIRSF PIRSF002764 7 231 7.7E-75 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria XFUD_10660 c6fadc41901e36ffceb8a528ff300514 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 112 130 4.7E-48 T 11-10-2018 XFUD_10660 c6fadc41901e36ffceb8a528ff300514 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 64 81 4.7E-48 T 11-10-2018 XFUD_10660 c6fadc41901e36ffceb8a528ff300514 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 167 186 4.7E-48 T 11-10-2018 XFUD_10660 c6fadc41901e36ffceb8a528ff300514 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 38 59 4.7E-48 T 11-10-2018 XFUD_10660 c6fadc41901e36ffceb8a528ff300514 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 87 110 4.7E-48 T 11-10-2018 XFUD_10660 c6fadc41901e36ffceb8a528ff300514 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 204 227 4.7E-48 T 11-10-2018 XFUD_10660 c6fadc41901e36ffceb8a528ff300514 231 Pfam PF03379 CcmB protein 16 228 2.0E-65 T 11-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 XFUD_06140 7a93898e4d3fa0745606f47eac81c510 394 SUPERFAMILY SSF53335 21 378 8.47E-85 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_06140 7a93898e4d3fa0745606f47eac81c510 394 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 79 322 4.9E-47 T 11-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 XFUD_06140 7a93898e4d3fa0745606f47eac81c510 394 Gene3D G3DSA:3.40.50.12710 6 394 5.2E-112 T 11-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 XFUD_03875 3dcb3dd2732fe14fa870218335bd30c6 327 Gene3D G3DSA:3.40.50.300 110 315 5.0E-69 T 11-10-2018 XFUD_03875 3dcb3dd2732fe14fa870218335bd30c6 327 Pfam PF02562 PhoH-like protein 112 315 2.6E-91 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 XFUD_03875 3dcb3dd2732fe14fa870218335bd30c6 327 SUPERFAMILY SSF52540 118 287 3.48E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_05915 5aba1e6a8647f37a25545d513731e7d7 105 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 3.6E-27 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 XFUD_05915 5aba1e6a8647f37a25545d513731e7d7 105 SUPERFAMILY SSF69754 1 99 4.19E-31 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like XFUD_05915 5aba1e6a8647f37a25545d513731e7d7 105 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 3.9E-24 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 XFUD_05915 5aba1e6a8647f37a25545d513731e7d7 105 Gene3D G3DSA:3.30.160.100 1 105 3.6E-29 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like XFUD_06445 564c032fed6a113c492692b4b4e856b7 376 Pfam PF05137 Fimbrial assembly protein (PilN) 288 359 4.4E-12 T 11-10-2018 IPR007813 Fimbrial assembly PilN XFUD_06445 564c032fed6a113c492692b4b4e856b7 376 SUPERFAMILY SSF53067 87 186 1.42E-8 T 11-10-2018 XFUD_06445 564c032fed6a113c492692b4b4e856b7 376 Gene3D G3DSA:3.30.1490.300 106 164 4.2E-6 T 11-10-2018 XFUD_00130 fefb3543a103dc582c4c943e2feaa148 195 Pfam PF14341 PilX N-terminal 12 62 3.4E-15 T 11-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain XFUD_00130 fefb3543a103dc582c4c943e2feaa148 195 Pfam PF13681 Type IV pilus assembly protein PilX C-term 89 193 9.0E-12 T 11-10-2018 IPR025205 PilX/PilW C-terminal domain XFUD_06200 183697c5c9802e632fa69160fa96351e 109 Gene3D G3DSA:2.102.10.10 1 109 3.2E-30 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 XFUD_06200 183697c5c9802e632fa69160fa96351e 109 SUPERFAMILY SSF50022 2 106 6.02E-27 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 XFUD_06200 183697c5c9802e632fa69160fa96351e 109 Pfam PF00355 Rieske [2Fe-2S] domain 4 94 3.0E-17 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 XFUD_08105 8a81933b79fb27a071881903ef86b766 115 Pfam PF12375 Phage protein 14 64 6.1E-5 T 11-10-2018 IPR021077 Bacteriophage phi-Lf, Orf112 XFUD_06680 80ad5275b4eb70d31fcb2d967eb29a28 396 PIRSF PIRSF029215 1 396 7.8E-137 T 11-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 XFUD_06680 80ad5275b4eb70d31fcb2d967eb29a28 396 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 11 175 6.6E-61 T 11-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 XFUD_07175 80ad5275b4eb70d31fcb2d967eb29a28 396 PIRSF PIRSF029215 1 396 7.8E-137 T 11-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 XFUD_07175 80ad5275b4eb70d31fcb2d967eb29a28 396 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 11 175 6.6E-61 T 11-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 XFUD_06245 dbb658c7761f8f07a49b56e3bbf41022 223 Gene3D G3DSA:3.30.450.40 43 221 2.7E-41 T 11-10-2018 IPR029016 GAF-like domain superfamily XFUD_06245 dbb658c7761f8f07a49b56e3bbf41022 223 Pfam PF04340 Protein of unknown function, DUF484 4 223 2.0E-85 T 11-10-2018 IPR007435 Protein of unknown function DUF484 XFUD_06055 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 204 29.693 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD XFUD_06055 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 Gene3D G3DSA:1.10.3890.10 2 204 2.6E-56 T 11-10-2018 IPR035932 HflD-like superfamily XFUD_06055 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 Pfam PF04356 Protein of unknown function (DUF489) 7 196 2.0E-58 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD XFUD_06055 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 10 190 1.0E-90 T 11-10-2018 XFUD_06055 8ccbaa3d7a2b61aa7fb2d2de7180a5ff 204 SUPERFAMILY SSF101322 3 203 1.14E-59 T 11-10-2018 IPR035932 HflD-like superfamily XFUD_07295 83574dd9d9ad538fae8dc6ee35a6c126 387 Gene3D G3DSA:3.90.1340.10 133 191 1.1E-5 T 11-10-2018 IPR037053 Phage tail collar domain superfamily XFUD_07295 83574dd9d9ad538fae8dc6ee35a6c126 387 SUPERFAMILY SSF88874 132 277 1.44E-15 T 11-10-2018 XFUD_07295 83574dd9d9ad538fae8dc6ee35a6c126 387 Pfam PF07484 Phage Tail Collar Domain 139 191 2.6E-12 T 11-10-2018 IPR011083 Phage tail collar domain XFUD_01610 8e56071d29cd354a987f9e5b237bdbc2 60 TIGRFAM TIGR04560 ribo_THX: ribosomal small subunit protein bTHX 1 24 3.3E-13 T 11-10-2018 IPR030826 30S ribosomal protein GO:0005840 XFUD_01610 8e56071d29cd354a987f9e5b237bdbc2 60 Pfam PF17067 Ribosomal protein S31e 2 36 8.9E-9 T 11-10-2018 IPR030826 30S ribosomal protein GO:0005840 XFUD_12050 1c4e342625540637f26f43ebef21474f 130 Gene3D G3DSA:1.10.3510.10 2 127 9.7E-14 T 11-10-2018 IPR023138 NMB0513-like superfamily XFUD_12050 1c4e342625540637f26f43ebef21474f 130 SUPERFAMILY SSF160472 10 122 2.09E-35 T 11-10-2018 IPR023138 NMB0513-like superfamily XFUD_12050 1c4e342625540637f26f43ebef21474f 130 Pfam PF04591 Protein of unknown function, DUF596 58 129 7.9E-24 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFUD_11130 b4328b7dcae3fd8a78a7c21829badbf1 581 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 233 545 6.6E-103 T 11-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal XFUD_11130 b4328b7dcae3fd8a78a7c21829badbf1 581 Gene3D G3DSA:2.40.160.50 202 581 7.2E-93 T 11-10-2018 XFUD_11130 b4328b7dcae3fd8a78a7c21829badbf1 581 Pfam PF08479 POTRA domain, ShlB-type 90 169 6.1E-23 T 11-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type XFUD_11130 b4328b7dcae3fd8a78a7c21829badbf1 581 PIRSF PIRSF029745 11 581 7.2E-146 T 11-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 XFUD_11130 b4328b7dcae3fd8a78a7c21829badbf1 581 Pfam PF17287 POTRA domain 171 224 2.0E-20 T 11-10-2018 IPR035251 ShlB, POTRA domain XFUD_02385 008d98c810fda47f8e2941eec6303d2b 266 Gene3D G3DSA:3.30.2010.10 165 260 1.4E-15 T 11-10-2018 XFUD_02385 008d98c810fda47f8e2941eec6303d2b 266 Pfam PF01863 Protein of unknown function DUF45 45 248 2.9E-50 T 11-10-2018 IPR002725 Protein of unknown function DUF45 XFUD_11585 29782e711b7ffda564daf9550312acb7 189 SMART SM00644 16 159 3.0E-29 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XFUD_11585 29782e711b7ffda564daf9550312acb7 189 Gene3D G3DSA:3.40.80.10 17 183 1.5E-30 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XFUD_11585 29782e711b7ffda564daf9550312acb7 189 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 26 170 6.7E-22 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XFUD_11585 29782e711b7ffda564daf9550312acb7 189 SUPERFAMILY SSF55846 21 181 7.72E-33 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 XFUD_12155 b77719649ea6597a0967397acde8f2b3 84 SUPERFAMILY SSF47413 15 79 3.49E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_12155 b77719649ea6597a0967397acde8f2b3 84 Gene3D G3DSA:1.10.260.40 1 83 2.0E-19 T 11-10-2018 XFUD_12155 b77719649ea6597a0967397acde8f2b3 84 Pfam PF01381 Helix-turn-helix 26 76 4.0E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_12155 b77719649ea6597a0967397acde8f2b3 84 SMART SM00530 24 79 2.4E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_08885 c63fcc2bce71c6c4c3993a4b77d4b40d 458 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 58 265 9.3E-30 T 11-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 XFUD_08885 c63fcc2bce71c6c4c3993a4b77d4b40d 458 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 22 322 4.0E-107 T 11-10-2018 IPR014150 Conjugal transfer, TrbL XFUD_12345 c63fcc2bce71c6c4c3993a4b77d4b40d 458 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 58 265 9.3E-30 T 11-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 XFUD_12345 c63fcc2bce71c6c4c3993a4b77d4b40d 458 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 22 322 4.0E-107 T 11-10-2018 IPR014150 Conjugal transfer, TrbL XFUD_07035 b321e269892e69a45337386028049c81 62 Gene3D G3DSA:1.10.8.1050 1 60 1.1E-22 T 11-10-2018 XFUD_04650 2dc6af70ecc86ebfec923cb2787f84d7 191 Gene3D G3DSA:1.20.144.10 127 191 1.0E-5 T 11-10-2018 XFUD_04650 2dc6af70ecc86ebfec923cb2787f84d7 191 SUPERFAMILY SSF48317 133 186 2.49E-6 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XFUD_01585 39f548fcaf978d0d79ac591418ea4abe 552 Pfam PF08019 Domain of unknown function (DUF1705) 69 217 5.2E-45 T 11-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 XFUD_01585 39f548fcaf978d0d79ac591418ea4abe 552 SUPERFAMILY SSF53649 244 536 1.74E-15 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 XFUD_01585 39f548fcaf978d0d79ac591418ea4abe 552 Pfam PF00884 Sulfatase 247 534 3.1E-52 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 XFUD_01585 39f548fcaf978d0d79ac591418ea4abe 552 Gene3D G3DSA:3.40.720.10 231 552 1.1E-80 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 XFUD_06355 8772edbb2251dc76775c0d1dbd1c324b 241 SUPERFAMILY SSF54211 5 184 8.6E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold XFUD_06355 8772edbb2251dc76775c0d1dbd1c324b 241 Pfam PF03725 3' exoribonuclease family, domain 2 161 226 2.2E-7 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFUD_06355 8772edbb2251dc76775c0d1dbd1c324b 241 ProSitePatterns PS01277 Ribonuclease PH signature. 119 132 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site XFUD_06355 8772edbb2251dc76775c0d1dbd1c324b 241 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 5 239 1.9E-111 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 XFUD_06355 8772edbb2251dc76775c0d1dbd1c324b 241 SUPERFAMILY SSF55666 156 240 2.62E-23 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFUD_06355 8772edbb2251dc76775c0d1dbd1c324b 241 Hamap MF_00564 Ribonuclease PH [rph]. 14 240 44.012 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 XFUD_06355 8772edbb2251dc76775c0d1dbd1c324b 241 Gene3D G3DSA:3.30.230.70 13 241 2.1E-57 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFUD_06355 8772edbb2251dc76775c0d1dbd1c324b 241 Pfam PF01138 3' exoribonuclease family, domain 1 14 143 7.0E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 XFUD_05340 c6e802a42808e7211001ddaee3b1e8ff 165 Pfam PF06853 Protein of unknown function (DUF1249) 31 145 1.3E-23 T 11-10-2018 IPR009659 Protein of unknown function DUF1249 XFUD_06070 3663110b506ea34a8e48ba3143c041b7 106 SUPERFAMILY SSF54736 21 105 6.28E-31 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XFUD_06070 3663110b506ea34a8e48ba3143c041b7 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 16 101 27.365 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS XFUD_06070 3663110b506ea34a8e48ba3143c041b7 106 Gene3D G3DSA:3.30.1390.10 1 106 3.4E-40 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like XFUD_06070 3663110b506ea34a8e48ba3143c041b7 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 5.2E-32 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 XFUD_09610 784138849ad9dcd6f85be7160fedbf2a 413 SUPERFAMILY SSF51735 110 297 6.63E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_09610 784138849ad9dcd6f85be7160fedbf2a 413 SUPERFAMILY SSF52283 10 137 2.1E-44 T 11-10-2018 XFUD_09610 784138849ad9dcd6f85be7160fedbf2a 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 202 224 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site XFUD_09610 784138849ad9dcd6f85be7160fedbf2a 413 SUPERFAMILY SSF55021 335 412 8.4E-15 T 11-10-2018 XFUD_09610 784138849ad9dcd6f85be7160fedbf2a 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 296 3.6E-51 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 XFUD_09610 784138849ad9dcd6f85be7160fedbf2a 413 Gene3D G3DSA:3.40.50.720 16 314 2.1E-104 T 11-10-2018 XFUD_09610 784138849ad9dcd6f85be7160fedbf2a 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 328 2.1E-35 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 XFUD_09610 784138849ad9dcd6f85be7160fedbf2a 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 156 183 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XFUD_09610 784138849ad9dcd6f85be7160fedbf2a 413 Gene3D G3DSA:3.30.70.260 330 412 5.7E-28 T 11-10-2018 XFUD_09610 784138849ad9dcd6f85be7160fedbf2a 413 Gene3D G3DSA:3.40.50.720 111 299 2.1E-104 T 11-10-2018 XFUD_07880 be53aa577fe005fa8566f27b82dcda84 350 SUPERFAMILY SSF53686 23 315 1.14E-78 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme XFUD_07880 be53aa577fe005fa8566f27b82dcda84 350 Gene3D G3DSA:3.40.50.1100 27 313 4.0E-88 T 11-10-2018 XFUD_07880 be53aa577fe005fa8566f27b82dcda84 350 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 39 300 8.8E-70 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme XFUD_07880 be53aa577fe005fa8566f27b82dcda84 350 Gene3D G3DSA:3.40.50.1100 64 160 4.0E-88 T 11-10-2018 XFUD_02220 171d327bb8c2c09a7fc9e4cda3c03ca1 941 Gene3D G3DSA:3.40.50.410 153 336 2.0E-13 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily XFUD_02220 171d327bb8c2c09a7fc9e4cda3c03ca1 941 SUPERFAMILY SSF53300 153 304 4.3E-13 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily XFUD_02220 171d327bb8c2c09a7fc9e4cda3c03ca1 941 Pfam PF13550 Putative phage tail protein 401 551 5.8E-9 T 11-10-2018 IPR032876 Tip attachment protein J XFUD_09915 44e2dc8a1b959f97216c14cbe6a699a9 310 Gene3D G3DSA:3.90.1530.30 57 120 7.2E-27 T 11-10-2018 XFUD_09915 44e2dc8a1b959f97216c14cbe6a699a9 310 SUPERFAMILY SSF110849 44 178 4.45E-32 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily XFUD_09915 44e2dc8a1b959f97216c14cbe6a699a9 310 Gene3D G3DSA:1.10.10.2830 121 233 1.1E-34 T 11-10-2018 XFUD_09915 44e2dc8a1b959f97216c14cbe6a699a9 310 SMART SM00470 44 134 1.4E-36 T 11-10-2018 IPR003115 ParB/Sulfiredoxin XFUD_09915 44e2dc8a1b959f97216c14cbe6a699a9 310 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 42 217 2.7E-57 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 XFUD_09915 44e2dc8a1b959f97216c14cbe6a699a9 310 Pfam PF02195 ParB-like nuclease domain 47 134 2.7E-28 T 11-10-2018 IPR003115 ParB/Sulfiredoxin XFUD_12475 cc938684931feaf6cb6aeec89afeefb8 263 Pfam PF12083 Domain of unknown function (DUF3560) 4 125 2.3E-43 T 11-10-2018 IPR021944 Protein of unknown function DUF3560 XFUD_04805 eaeb10aadc7376a3d8b150825e947fbf 352 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 178 205 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 XFUD_04805 eaeb10aadc7376a3d8b150825e947fbf 352 Gene3D G3DSA:3.90.180.10 9 341 8.9E-124 T 11-10-2018 XFUD_04805 eaeb10aadc7376a3d8b150825e947fbf 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 XFUD_04805 eaeb10aadc7376a3d8b150825e947fbf 352 Gene3D G3DSA:3.40.50.720 166 321 8.9E-124 T 11-10-2018 XFUD_04805 eaeb10aadc7376a3d8b150825e947fbf 352 SUPERFAMILY SSF50129 6 174 3.8E-49 T 11-10-2018 IPR011032 GroES-like superfamily XFUD_04805 eaeb10aadc7376a3d8b150825e947fbf 352 SUPERFAMILY SSF51735 148 312 3.38E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily XFUD_04805 eaeb10aadc7376a3d8b150825e947fbf 352 Pfam PF00107 Zinc-binding dehydrogenase 185 306 4.7E-17 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 XFUD_04805 eaeb10aadc7376a3d8b150825e947fbf 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 143 9.6E-25 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 XFUD_01380 93ed67134c4fbb418047a01cbec96ad8 501 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 495 1.1E-191 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01380 93ed67134c4fbb418047a01cbec96ad8 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 9.2E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01380 93ed67134c4fbb418047a01cbec96ad8 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 386 412 9.2E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01380 93ed67134c4fbb418047a01cbec96ad8 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 9.2E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01380 93ed67134c4fbb418047a01cbec96ad8 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 135 154 9.2E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01380 93ed67134c4fbb418047a01cbec96ad8 501 Pfam PF00361 Proton-conducting membrane transporter 129 429 7.8E-78 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_00170 ca1b8b2cb62328266cf563d52cbfafa9 419 Pfam PF07399 Putative Na+/H+ antiporter 6 418 2.1E-184 T 11-10-2018 IPR009978 Putative Na+/H+ antiporter XFUD_00115 439f372c5a44aaf76f525f2d53083928 187 SUPERFAMILY SSF54523 15 140 8.63E-22 T 11-10-2018 XFUD_00115 439f372c5a44aaf76f525f2d53083928 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 35 8.1E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_00115 439f372c5a44aaf76f525f2d53083928 187 Pfam PF12019 Type II transport protein GspH 51 167 9.8E-19 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 XFUD_00115 439f372c5a44aaf76f525f2d53083928 187 Gene3D G3DSA:3.30.700.10 15 159 3.4E-13 T 11-10-2018 XFUD_03395 45831c8b69a17c40b3ec0776fea47399 367 Gene3D G3DSA:3.40.50.2000 16 168 2.9E-107 T 11-10-2018 XFUD_03395 45831c8b69a17c40b3ec0776fea47399 367 Gene3D G3DSA:3.40.50.2000 169 318 2.9E-107 T 11-10-2018 XFUD_03395 45831c8b69a17c40b3ec0776fea47399 367 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 15 366 35.544 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_03395 45831c8b69a17c40b3ec0776fea47399 367 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 15 152 7.3E-39 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_03395 45831c8b69a17c40b3ec0776fea47399 367 SUPERFAMILY SSF53756 14 364 2.96E-108 T 11-10-2018 XFUD_03395 45831c8b69a17c40b3ec0776fea47399 367 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 12 362 1.7E-112 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_03395 45831c8b69a17c40b3ec0776fea47399 367 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 192 356 9.9E-36 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 XFUD_00650 513a786f0568b78341bcee1ee00c2abb 271 Pfam PF11692 Protein of unknown function (DUF3289) 6 265 1.9E-104 T 11-10-2018 IPR017483 Conserved hypothetical protein CHP03034 XFUD_00650 513a786f0568b78341bcee1ee00c2abb 271 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 5 265 1.6E-130 T 11-10-2018 IPR017483 Conserved hypothetical protein CHP03034 XFUD_11860 198fc9d5fa21d590964fb048808fddff 200 Pfam PF01810 LysE type translocator 14 194 3.7E-34 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XFUD_11860 198fc9d5fa21d590964fb048808fddff 200 PIRSF PIRSF006324 2 199 3.6E-44 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 XFUD_11350 30090c16fa371e11c60c69af6296159b 107 SUPERFAMILY SSF54862 1 96 1.21E-23 T 11-10-2018 XFUD_11350 30090c16fa371e11c60c69af6296159b 107 Pfam PF00037 4Fe-4S binding domain 34 56 3.5E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain XFUD_11350 30090c16fa371e11c60c69af6296159b 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site XFUD_11350 30090c16fa371e11c60c69af6296159b 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.4E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 XFUD_11350 30090c16fa371e11c60c69af6296159b 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.4E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 XFUD_11350 30090c16fa371e11c60c69af6296159b 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.4E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 XFUD_11350 30090c16fa371e11c60c69af6296159b 107 Gene3D G3DSA:3.30.70.20 2 98 1.4E-30 T 11-10-2018 XFUD_11350 30090c16fa371e11c60c69af6296159b 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 8.3E-19 T 11-10-2018 IPR022569 Ferredoxin, C-terminal XFUD_08280 515e2b41cceb49c58aca1423e9120998 186 SMART SM00507 78 131 6.8E-13 T 11-10-2018 IPR003615 HNH nuclease XFUD_08280 515e2b41cceb49c58aca1423e9120998 186 Gene3D G3DSA:3.30.40.60 75 163 4.2E-22 T 11-10-2018 XFUD_08280 515e2b41cceb49c58aca1423e9120998 186 Pfam PF14279 HNH endonuclease 91 145 1.9E-15 T 11-10-2018 IPR029471 HNH endonuclease 5 XFUD_02710 f75155e1586861836a5735f517edda53 419 Pfam PF04235 Protein of unknown function (DUF418) 251 407 2.2E-42 T 11-10-2018 IPR007349 Domain of unknown function DUF418 XFUD_07450 fd2bb41ac7e0cb3ec68034be172d4912 441 SUPERFAMILY SSF103473 30 430 3.79E-23 T 11-10-2018 IPR036259 MFS transporter superfamily XFUD_07450 fd2bb41ac7e0cb3ec68034be172d4912 441 Gene3D G3DSA:1.20.1250.20 27 422 3.9E-13 T 11-10-2018 XFUD_05835 5a5451702ce2a3f1728dd5fa6640b402 113 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 19 112 1.4E-36 T 11-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 XFUD_05835 5a5451702ce2a3f1728dd5fa6640b402 113 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 24 97 2.2E-15 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 XFUD_10370 9b1cac200419c614e9c40b7df00a1273 258 SUPERFAMILY SSF88713 65 254 1.26E-50 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 XFUD_10370 9b1cac200419c614e9c40b7df00a1273 258 Pfam PF01522 Polysaccharide deacetylase 73 193 2.7E-28 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 XFUD_10370 9b1cac200419c614e9c40b7df00a1273 258 Gene3D G3DSA:3.20.20.370 62 257 2.0E-46 T 11-10-2018 XFUD_09570 6c77d684bfcf911d611ed9bef2f56442 133 SUPERFAMILY SSF160472 1 121 3.66E-41 T 11-10-2018 IPR023138 NMB0513-like superfamily XFUD_09570 6c77d684bfcf911d611ed9bef2f56442 133 Pfam PF04591 Protein of unknown function, DUF596 56 132 1.0E-29 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFUD_09570 6c77d684bfcf911d611ed9bef2f56442 133 Gene3D G3DSA:1.10.3510.10 2 123 2.2E-23 T 11-10-2018 IPR023138 NMB0513-like superfamily XFUD_04795 3dd71296725114da33eef0fd7f0202b0 189 Gene3D G3DSA:3.40.50.360 2 188 1.6E-54 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFUD_04795 3dd71296725114da33eef0fd7f0202b0 189 SUPERFAMILY SSF52218 3 186 1.83E-45 T 11-10-2018 IPR029039 Flavoprotein-like superfamily XFUD_04795 3dd71296725114da33eef0fd7f0202b0 189 Pfam PF03358 NADPH-dependent FMN reductase 46 123 4.5E-10 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 XFUD_04795 3dd71296725114da33eef0fd7f0202b0 189 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 XFUD_06785 1786449dde41682b71f9cd5f01ae803f 98 PIRSF PIRSF028744 1 98 4.9E-41 T 11-10-2018 IPR014056 Addiction module killer protein, predicted XFUD_06785 1786449dde41682b71f9cd5f01ae803f 98 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 96 3.1E-40 T 11-10-2018 IPR014056 Addiction module killer protein, predicted XFUD_08880 8d5e8905d346d115bd5cf523c6837ceb 201 SUPERFAMILY SSF53955 7 124 3.44E-24 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_10885 bf2a61d8d55072931f3622b9ebe629c0 103 Pfam PF16083 LydA holin phage, holin superfamily III 9 83 7.9E-20 T 11-10-2018 IPR032126 LydA-like holin XFUD_02980 bf2a61d8d55072931f3622b9ebe629c0 103 Pfam PF16083 LydA holin phage, holin superfamily III 9 83 7.9E-20 T 11-10-2018 IPR032126 LydA-like holin XFUD_08670 d96b1e12d43410a0059acb391e3f6155 183 SUPERFAMILY SSF117916 81 181 9.16E-25 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XFUD_08670 d96b1e12d43410a0059acb391e3f6155 183 Gene3D G3DSA:3.30.300.130 75 182 3.9E-31 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily XFUD_08670 d96b1e12d43410a0059acb391e3f6155 183 Pfam PF01883 Iron-sulfur cluster assembly protein 85 159 2.9E-10 T 11-10-2018 IPR002744 MIP18 family-like XFUD_08670 d96b1e12d43410a0059acb391e3f6155 183 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 9 182 6.4E-78 T 11-10-2018 IPR017776 FeS assembly SUF system protein SufT, putative XFUD_07100 35f9f99364266de207849d23db328510 120 SUPERFAMILY SSF103084 2 119 9.68E-20 T 11-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 XFUD_07100 35f9f99364266de207849d23db328510 120 Gene3D G3DSA:3.30.1330.70 1 120 8.0E-8 T 11-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 XFUD_06915 892871cae9a9aa1ce7f2aa92add0f3fa 376 Gene3D G3DSA:3.40.50.300 105 359 3.3E-86 T 11-10-2018 XFUD_06915 892871cae9a9aa1ce7f2aa92add0f3fa 376 Gene3D G3DSA:3.30.450.90 2 102 1.7E-31 T 11-10-2018 XFUD_06915 892871cae9a9aa1ce7f2aa92add0f3fa 376 Pfam PF00437 Type II/IV secretion system protein 38 271 7.3E-35 T 11-10-2018 IPR001482 Type II/IV secretion system protein XFUD_06915 892871cae9a9aa1ce7f2aa92add0f3fa 376 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 347 1.8E-133 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 XFUD_06915 892871cae9a9aa1ce7f2aa92add0f3fa 376 SUPERFAMILY SSF52540 8 341 7.72E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11240 cb28fcf970d8bfda39499b91b80dabd6 227 Pfam PF01569 PAP2 superfamily 110 218 6.7E-18 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XFUD_11240 cb28fcf970d8bfda39499b91b80dabd6 227 SUPERFAMILY SSF48317 19 221 8.37E-35 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XFUD_11240 cb28fcf970d8bfda39499b91b80dabd6 227 Gene3D G3DSA:1.20.144.10 135 227 9.8E-19 T 11-10-2018 XFUD_11240 cb28fcf970d8bfda39499b91b80dabd6 227 Gene3D G3DSA:1.20.144.10 20 134 2.4E-6 T 11-10-2018 XFUD_11240 cb28fcf970d8bfda39499b91b80dabd6 227 SMART SM00014 104 213 4.3E-13 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XFUD_12275 10fe6c522a0ee8770f9133af0fcda042 90 Gene3D G3DSA:1.20.5.780 2 82 5.0E-12 T 11-10-2018 XFUD_12275 10fe6c522a0ee8770f9133af0fcda042 90 Pfam PF08681 Protein of unknown function (DUF1778) 6 80 8.5E-25 T 11-10-2018 IPR014795 Vibrio phage ICP1, Orf50 XFUD_12275 10fe6c522a0ee8770f9133af0fcda042 90 SUPERFAMILY SSF47598 1 79 1.78E-19 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XFUD_02375 4f5f31837981fe946c4896b7694ae947 301 Pfam PF04366 Las17-binding protein actin regulator 100 212 8.1E-30 T 11-10-2018 IPR007461 Ysc84 actin-binding domain XFUD_03730 657063f7e8f31c524a551f5d531fe445 443 Gene3D G3DSA:3.40.50.2000 269 431 4.2E-18 T 11-10-2018 XFUD_03730 657063f7e8f31c524a551f5d531fe445 443 SUPERFAMILY SSF53756 88 435 3.92E-31 T 11-10-2018 XFUD_03730 657063f7e8f31c524a551f5d531fe445 443 Pfam PF13692 Glycosyl transferases group 1 271 405 3.6E-25 T 11-10-2018 XFUD_10775 d50165d6f458de14d7203bc182d97da6 739 Pfam PF10145 Phage-related minor tail protein 162 373 6.1E-32 T 11-10-2018 IPR010090 Phage tail tape measure protein XFUD_10775 d50165d6f458de14d7203bc182d97da6 739 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 117 480 1.2E-64 T 11-10-2018 IPR010090 Phage tail tape measure protein XFUD_05600 fea91a2d26c4d200d5983ed22b073972 188 Pfam PF01292 Prokaryotic cytochrome b561 9 180 4.4E-29 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 XFUD_05600 fea91a2d26c4d200d5983ed22b073972 188 SUPERFAMILY SSF81342 6 180 1.26E-35 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 XFUD_10215 b945ceae72950a7428f147a765c38fcf 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-10-2018 IPR019844 Cold-shock conserved site XFUD_10215 b945ceae72950a7428f147a765c38fcf 67 PRINTS PR00050 Cold shock protein signature 4 19 9.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFUD_10215 b945ceae72950a7428f147a765c38fcf 67 PRINTS PR00050 Cold shock protein signature 25 34 9.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFUD_10215 b945ceae72950a7428f147a765c38fcf 67 PRINTS PR00050 Cold shock protein signature 40 58 9.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFUD_10215 b945ceae72950a7428f147a765c38fcf 67 SMART SM00357 3 67 1.8E-28 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 XFUD_10215 b945ceae72950a7428f147a765c38fcf 67 SUPERFAMILY SSF50249 1 66 4.5E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_10215 b945ceae72950a7428f147a765c38fcf 67 PIRSF PIRSF002599 1 67 7.1E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 XFUD_10215 b945ceae72950a7428f147a765c38fcf 67 Gene3D G3DSA:2.40.50.140 1 65 1.5E-28 T 11-10-2018 XFUD_10215 b945ceae72950a7428f147a765c38fcf 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 3.4E-29 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 XFUD_06050 cbb9cbc98a091aaf8448f2f8aafbfdc9 255 SUPERFAMILY SSF56219 8 251 6.41E-31 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XFUD_06050 cbb9cbc98a091aaf8448f2f8aafbfdc9 255 Gene3D G3DSA:3.60.10.10 7 252 8.1E-35 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily XFUD_06050 cbb9cbc98a091aaf8448f2f8aafbfdc9 255 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 12 240 4.5E-11 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase XFUD_04510 8c4e5a9766bb4f470b63f508d3ccdc3b 219 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 11 212 1.5E-83 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 XFUD_04510 8c4e5a9766bb4f470b63f508d3ccdc3b 219 Pfam PF01081 KDPG and KHG aldolase 12 203 5.5E-63 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 XFUD_04510 8c4e5a9766bb4f470b63f508d3ccdc3b 219 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 42 51 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 XFUD_04510 8c4e5a9766bb4f470b63f508d3ccdc3b 219 Gene3D G3DSA:3.20.20.70 1 216 4.7E-69 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_04510 8c4e5a9766bb4f470b63f508d3ccdc3b 219 SUPERFAMILY SSF51569 7 213 3.3E-61 T 11-10-2018 XFUD_08470 412145fc4476d0d73d1b0d60b09ef95a 680 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 461 644 9.9E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 XFUD_08470 412145fc4476d0d73d1b0d60b09ef95a 680 Gene3D G3DSA:1.10.287.950 352 679 5.9E-59 T 11-10-2018 XFUD_08470 412145fc4476d0d73d1b0d60b09ef95a 680 SMART SM00283 416 677 1.1E-82 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 XFUD_08470 412145fc4476d0d73d1b0d60b09ef95a 680 SUPERFAMILY SSF58104 379 678 1.05E-64 T 11-10-2018 XFUD_08470 412145fc4476d0d73d1b0d60b09ef95a 680 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 543 572 1.2E-18 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XFUD_08470 412145fc4476d0d73d1b0d60b09ef95a 680 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 514 541 1.2E-18 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XFUD_08470 412145fc4476d0d73d1b0d60b09ef95a 680 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 437 466 1.2E-18 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 XFUD_00845 12076c21b93d83da0b5f5d09d4c06635 235 Pfam PF04367 Protein of unknown function (DUF502) 81 181 1.2E-26 T 11-10-2018 IPR007462 Protein of unknown function DUF502 XFUD_07940 b4bfa017d6a0c47a214e7424a2da5d7a 552 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 444 3.5E-180 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 XFUD_07940 b4bfa017d6a0c47a214e7424a2da5d7a 552 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 549 50.817 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 XFUD_07940 b4bfa017d6a0c47a214e7424a2da5d7a 552 SUPERFAMILY SSF56112 92 434 9.48E-34 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily XFUD_07940 b4bfa017d6a0c47a214e7424a2da5d7a 552 Pfam PF03109 ABC1 family 110 227 2.8E-33 T 11-10-2018 IPR004147 UbiB domain XFUD_05725 84fa955aa89484f0e5d476256d69dc4d 278 SUPERFAMILY SSF56281 3 268 1.57E-33 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFUD_05725 84fa955aa89484f0e5d476256d69dc4d 278 Pfam PF00753 Metallo-beta-lactamase superfamily 42 263 1.9E-42 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFUD_05725 84fa955aa89484f0e5d476256d69dc4d 278 SMART SM00849 44 263 7.3E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase XFUD_05725 84fa955aa89484f0e5d476256d69dc4d 278 Gene3D G3DSA:3.60.15.10 2 275 5.7E-51 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like XFUD_06615 d839dac22de56b57e4a8a401630f01bd 88 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 81 1.0E-21 T 11-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system XFUD_06615 d839dac22de56b57e4a8a401630f01bd 88 Gene3D G3DSA:3.10.450.530 1 83 5.5E-15 T 11-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily XFUD_01740 905ae0de74cdbc160a3e75c7aa1e85a8 101 Pfam PF13466 STAS domain 14 93 1.2E-11 T 11-10-2018 IPR002645 STAS domain XFUD_01740 905ae0de74cdbc160a3e75c7aa1e85a8 101 Gene3D G3DSA:3.30.750.24 5 101 7.3E-9 T 11-10-2018 IPR036513 STAS domain superfamily XFUD_01740 905ae0de74cdbc160a3e75c7aa1e85a8 101 SUPERFAMILY SSF52091 1 98 1.75E-11 T 11-10-2018 IPR036513 STAS domain superfamily XFUD_00525 a8371921430c0a38318ee7d49e904e25 674 SUPERFAMILY SSF55486 1 671 9.04E-179 T 11-10-2018 XFUD_00525 a8371921430c0a38318ee7d49e904e25 674 Gene3D G3DSA:1.10.1370.40 13 669 4.4E-238 T 11-10-2018 XFUD_00525 a8371921430c0a38318ee7d49e904e25 674 Pfam PF01432 Peptidase family M3 224 671 2.7E-136 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 XFUD_00525 a8371921430c0a38318ee7d49e904e25 674 Gene3D G3DSA:1.10.1370.10 139 604 4.4E-238 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 XFUD_12330 7b276124ae3f63ece4d4ab05fcf60cf1 128 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 19 112 1.5E-20 T 11-10-2018 IPR009241 Toxin HigB-like XFUD_02595 aa2f4c77b038b21016d11eb03fa94c19 269 SUPERFAMILY SSF53613 9 261 1.31E-72 T 11-10-2018 IPR029056 Ribokinase-like XFUD_02595 aa2f4c77b038b21016d11eb03fa94c19 269 Pfam PF08543 Phosphomethylpyrimidine kinase 16 258 5.4E-87 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 XFUD_02595 aa2f4c77b038b21016d11eb03fa94c19 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 9 259 1.8E-87 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 XFUD_02595 aa2f4c77b038b21016d11eb03fa94c19 269 Gene3D G3DSA:3.40.1190.20 2 267 2.9E-91 T 11-10-2018 IPR029056 Ribokinase-like XFUD_07085 b2c73fa263a1f04fa165f72bdaf34641 102 Pfam PF07120 Protein of unknown function (DUF1376) 2 85 1.2E-32 T 11-10-2018 IPR010781 Protein of unknown function DUF1376 XFUD_12205 572bc592d033b5522d74a5a27ce7e5be 348 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 46 266 3.0E-50 T 11-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 XFUD_04020 91a5363cb26de84e089ebaa96f41d372 373 Pfam PF09566 SacI restriction endonuclease 186 290 2.0E-4 T 11-10-2018 IPR019066 Restriction endonuclease, type II, SacI XFUD_07710 4903c2cf94326dafeb369df850946a6e 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 12 62 3.5E-25 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA XFUD_03795 9925925c6c283e576f0808ab7c65a375 282 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 282 2.5E-142 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFUD_08390 731912ad369fdf77ac4a5b86db4877ec 212 SUPERFAMILY SSF53335 31 211 1.16E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_08390 731912ad369fdf77ac4a5b86db4877ec 212 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 20 208 26.129 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XFUD_08390 731912ad369fdf77ac4a5b86db4877ec 212 Pfam PF02527 rRNA small subunit methyltransferase G 31 207 2.6E-52 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XFUD_08390 731912ad369fdf77ac4a5b86db4877ec 212 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 211 7.7E-59 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XFUD_08390 731912ad369fdf77ac4a5b86db4877ec 212 PIRSF PIRSF003078 1 212 1.0E-63 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 XFUD_08390 731912ad369fdf77ac4a5b86db4877ec 212 Gene3D G3DSA:3.40.50.150 10 212 3.8E-60 T 11-10-2018 XFUD_01970 6cfa698346bb9831ccc295c16266da81 164 Pfam PF14341 PilX N-terminal 20 67 1.7E-7 T 11-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain XFUD_08855 7e98d9eb1aaf4e0dfb7bdbf24c7d58ba 240 Gene3D G3DSA:3.40.630.30 59 189 2.4E-8 T 11-10-2018 XFUD_08855 7e98d9eb1aaf4e0dfb7bdbf24c7d58ba 240 SUPERFAMILY SSF55729 89 190 1.9E-11 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFUD_09845 e36fc63936c3c165f8c0b00e7a25c532 653 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 10 612 2.0E-181 T 11-10-2018 IPR004814 Oligopeptide transporter OPT XFUD_09845 e36fc63936c3c165f8c0b00e7a25c532 653 Pfam PF03169 OPT oligopeptide transporter protein 9 611 2.4E-123 T 11-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 XFUD_09845 e36fc63936c3c165f8c0b00e7a25c532 653 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 2 608 5.6E-90 T 11-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 XFUD_00315 cd2fbbb8964b4ce6e33e42b0b28f8866 265 SUPERFAMILY SSF56752 16 246 1.83E-38 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 XFUD_00315 cd2fbbb8964b4ce6e33e42b0b28f8866 265 Gene3D G3DSA:3.20.10.10 112 262 1.5E-20 T 11-10-2018 XFUD_00315 cd2fbbb8964b4ce6e33e42b0b28f8866 265 Gene3D G3DSA:3.30.470.10 17 93 2.7E-7 T 11-10-2018 XFUD_00315 cd2fbbb8964b4ce6e33e42b0b28f8866 265 Pfam PF01063 Amino-transferase class IV 25 238 2.4E-33 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 XFUD_03285 2d924a1984b018b7bb4067e59457029b 207 Gene3D G3DSA:2.50.20.10 22 184 3.7E-5 T 11-10-2018 XFUD_11610 d2fac8099f07d1641793051d4c5843e4 222 Pfam PF10053 Uncharacterized conserved protein (DUF2290) 24 220 3.3E-86 T 11-10-2018 IPR018742 Protein of unknown function DUF2290 XFUD_07515 464824a043eafcf58ce18b4e34b2666b 167 Gene3D G3DSA:2.40.100.20 51 165 8.5E-12 T 11-10-2018 XFUD_07515 464824a043eafcf58ce18b4e34b2666b 167 SUPERFAMILY SSF50891 51 166 3.79E-22 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily XFUD_08700 3dc0539a283be7d81d62e2200c1f13fa 183 ProSitePatterns PS00893 Nudix box signature. 72 93 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 XFUD_08700 3dc0539a283be7d81d62e2200c1f13fa 183 Gene3D G3DSA:3.90.79.10 9 180 4.2E-33 T 11-10-2018 XFUD_08700 3dc0539a283be7d81d62e2200c1f13fa 183 SUPERFAMILY SSF55811 15 172 2.84E-28 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 XFUD_08700 3dc0539a283be7d81d62e2200c1f13fa 183 Pfam PF00293 NUDIX domain 36 98 1.6E-9 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 XFUD_11235 04c5cbb92b3e4e021fbdefab9d8fc022 311 SUPERFAMILY SSF103481 44 144 1.03E-16 T 11-10-2018 XFUD_11235 04c5cbb92b3e4e021fbdefab9d8fc022 311 Pfam PF00892 EamA-like transporter family 152 278 1.3E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XFUD_11235 04c5cbb92b3e4e021fbdefab9d8fc022 311 Pfam PF00892 EamA-like transporter family 11 141 1.0E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 XFUD_11235 04c5cbb92b3e4e021fbdefab9d8fc022 311 SUPERFAMILY SSF103481 185 282 1.96E-15 T 11-10-2018 XFUD_02820 68db31944403343c1d1d190135539f56 319 Pfam PF13177 DNA polymerase III, delta subunit 9 170 2.1E-33 T 11-10-2018 XFUD_02820 68db31944403343c1d1d190135539f56 319 SUPERFAMILY SSF52540 7 208 1.26E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_02820 68db31944403343c1d1d190135539f56 319 Gene3D G3DSA:3.40.50.300 4 171 1.0E-41 T 11-10-2018 XFUD_04470 438db3cf43da49d581119f7be1a62fc3 447 SUPERFAMILY SSF56935 30 447 2.2E-77 T 11-10-2018 XFUD_04470 438db3cf43da49d581119f7be1a62fc3 447 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 21 447 2.9E-145 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) XFUD_04470 438db3cf43da49d581119f7be1a62fc3 447 Gene3D G3DSA:2.40.160.60 30 447 1.6E-115 T 11-10-2018 XFUD_11435 75baf3a1101d5c01f7a552c5517438c1 289 Gene3D G3DSA:3.30.2010.10 65 158 5.4E-32 T 11-10-2018 XFUD_11435 75baf3a1101d5c01f7a552c5517438c1 289 Pfam PF01435 Peptidase family M48 75 285 3.7E-37 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 XFUD_11435 75baf3a1101d5c01f7a552c5517438c1 289 Hamap MF_00188 Protease HtpX [htpX]. 2 287 24.509 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 XFUD_09650 5edd8d920d796303f44a902557f9bdd4 265 Pfam PF00977 Histidine biosynthesis protein 5 236 1.8E-65 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 XFUD_09650 5edd8d920d796303f44a902557f9bdd4 265 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 241 1.8E-74 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 XFUD_09650 5edd8d920d796303f44a902557f9bdd4 265 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 244 31.134 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 XFUD_09650 5edd8d920d796303f44a902557f9bdd4 265 SUPERFAMILY SSF51366 3 243 1.88E-59 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XFUD_09650 5edd8d920d796303f44a902557f9bdd4 265 Gene3D G3DSA:3.20.20.70 4 249 3.4E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_03170 b978021c59b30502722a1a20f94dc9b6 134 SUPERFAMILY SSF81273 82 113 5.89E-6 T 11-10-2018 XFUD_03170 b978021c59b30502722a1a20f94dc9b6 134 Gene3D G3DSA:3.30.160.510 62 125 2.1E-31 T 11-10-2018 XFUD_03170 b978021c59b30502722a1a20f94dc9b6 134 Pfam PF00816 H-NS histone family 18 112 4.5E-17 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 XFUD_03170 b978021c59b30502722a1a20f94dc9b6 134 SMART SM00528 79 122 1.5E-4 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 XFUD_04885 632ad1690aebf0c456c6a86dabeebf41 100 SUPERFAMILY SSF54189 7 99 3.6E-27 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 XFUD_04885 632ad1690aebf0c456c6a86dabeebf41 100 Pfam PF00276 Ribosomal protein L23 11 96 7.5E-27 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 XFUD_04885 632ad1690aebf0c456c6a86dabeebf41 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 9 99 20.808 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 XFUD_04885 632ad1690aebf0c456c6a86dabeebf41 100 Gene3D G3DSA:3.30.70.330 3 99 7.2E-31 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily XFUD_00590 c8aa10b2da4e402b9e4b5f809758b81b 380 Pfam PF01757 Acyltransferase family 4 356 2.6E-19 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 XFUD_01355 368878941eed0da9e8529469d46403f9 363 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 24 357 23.987 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01355 368878941eed0da9e8529469d46403f9 363 Pfam PF00146 NADH dehydrogenase 31 351 1.6E-117 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_01355 368878941eed0da9e8529469d46403f9 363 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 229 242 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_08910 e8c227c11290067e39850664f5ecf5ed 296 Pfam PF03524 Conjugal transfer protein 71 294 6.4E-53 T 11-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX XFUD_08910 e8c227c11290067e39850664f5ecf5ed 296 Gene3D G3DSA:2.60.40.2500 189 295 9.5E-7 T 11-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily XFUD_08910 e8c227c11290067e39850664f5ecf5ed 296 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 69 282 7.5E-78 T 11-10-2018 IPR014142 P-type conjugative transfer protein TrbG XFUD_02015 d30eb8934e769345beee9d4e125fadc5 197 Gene3D G3DSA:2.160.10.10 27 92 2.1E-11 T 11-10-2018 XFUD_02015 d30eb8934e769345beee9d4e125fadc5 197 Gene3D G3DSA:2.160.10.10 93 188 3.7E-14 T 11-10-2018 XFUD_02015 d30eb8934e769345beee9d4e125fadc5 197 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 158 2.4E-6 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_02015 d30eb8934e769345beee9d4e125fadc5 197 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 64 97 2.2E-7 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_02015 d30eb8934e769345beee9d4e125fadc5 197 SUPERFAMILY SSF51161 17 189 7.76E-27 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFUD_07565 bf305a4f722313c59b5324e75f98c4f7 300 Pfam PF12101 Protein of unknown function (DUF3577) 5 120 2.0E-36 T 11-10-2018 IPR021960 Protein of unknown function DUF3577 XFUD_07565 bf305a4f722313c59b5324e75f98c4f7 300 Pfam PF12101 Protein of unknown function (DUF3577) 131 257 1.3E-46 T 11-10-2018 IPR021960 Protein of unknown function DUF3577 XFUD_01580 7baf71cfa1193c9d1c053097e4cca5e2 252 Pfam PF01569 PAP2 superfamily 109 235 2.9E-8 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase XFUD_01580 7baf71cfa1193c9d1c053097e4cca5e2 252 SUPERFAMILY SSF48317 19 239 2.48E-14 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily XFUD_05870 04889460fdebe1bf95aa0ddf33263911 402 Gene3D G3DSA:1.20.1530.20 8 382 1.0E-31 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily XFUD_05870 04889460fdebe1bf95aa0ddf33263911 402 Pfam PF00999 Sodium/hydrogen exchanger family 14 374 4.4E-24 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 XFUD_03300 ecbd6ead0e1a91c48885b6e915e492e1 144 Gene3D G3DSA:3.10.129.10 2 143 3.5E-6 T 11-10-2018 XFUD_03300 ecbd6ead0e1a91c48885b6e915e492e1 144 SUPERFAMILY SSF54637 8 142 1.49E-12 T 11-10-2018 IPR029069 HotDog domain superfamily XFUD_12450 e9a8108b02a07fa764539d5ed5351ef7 86 Pfam PF16509 TrfB plasmid transcriptional repressor 11 84 2.6E-10 T 11-10-2018 IPR032428 TrfB transcriptional repressor protein XFUD_12450 e9a8108b02a07fa764539d5ed5351ef7 86 Gene3D G3DSA:1.10.10.2690 7 86 4.2E-18 T 11-10-2018 XFUD_06380 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 1.2E-13 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XFUD_06380 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.2E-13 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XFUD_06380 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 1.2E-13 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 XFUD_06380 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 1.4E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFUD_06380 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 1.4E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFUD_06380 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 1.4E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFUD_06380 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 SUPERFAMILY SSF53474 2 301 5.4E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_06380 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 Pfam PF00561 alpha/beta hydrolase fold 35 298 1.5E-31 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFUD_06380 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 PIRSF PIRSF006431 1 313 1.7E-136 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 XFUD_06380 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 Gene3D G3DSA:3.40.50.1820 1 313 4.4E-112 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_06380 e6c3abbaf6d5e2d1ada0d134006f4ab8 313 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 312 8.9E-166 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 XFUD_09815 f4838cf2953c6cca8591c6584d7dc635 106 Pfam PF04341 Protein of unknown function, DUF485 15 101 1.9E-27 T 11-10-2018 IPR007436 Protein of unknown function DUF485 XFUD_09645 ead71161b5786135b28021122fdf3a23 257 Gene3D G3DSA:3.20.20.70 1 257 1.2E-86 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_09645 ead71161b5786135b28021122fdf3a23 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 9.3E-96 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 XFUD_09645 ead71161b5786135b28021122fdf3a23 257 SUPERFAMILY SSF51366 1 255 7.85E-68 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 XFUD_09645 ead71161b5786135b28021122fdf3a23 257 Pfam PF00977 Histidine biosynthesis protein 5 238 4.2E-69 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 XFUD_09645 ead71161b5786135b28021122fdf3a23 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 42.659 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 XFUD_11680 e4b50340ec943178e454a45970f6e6a9 189 Pfam PF11304 Protein of unknown function (DUF3106) 46 104 4.3E-7 T 11-10-2018 IPR021455 Protein of unknown function DUF3106 XFUD_02390 e964528bb6d089a51eee971ba527a487 302 Pfam PF04381 Putative exonuclease, RdgC 1 289 3.8E-95 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 XFUD_02390 e964528bb6d089a51eee971ba527a487 302 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 300 41.613 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 XFUD_01300 6101fdc070ceebfdc802a5e16b2d920f 95 Gene3D G3DSA:2.40.420.20 66 94 1.4E-7 T 11-10-2018 XFUD_01300 6101fdc070ceebfdc802a5e16b2d920f 95 Gene3D G3DSA:2.40.30.170 3 60 1.4E-7 T 11-10-2018 XFUD_07310 686edbd34d15e11e0ce165b6e0cddd7a 96 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 3 96 8.2E-34 T 11-10-2018 IPR007711 Toxin HigB-1 XFUD_07310 686edbd34d15e11e0ce165b6e0cddd7a 96 SUPERFAMILY SSF143011 1 96 2.55E-7 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XFUD_11040 da81853e416bc24b958764fbfdafc1df 339 Gene3D G3DSA:1.10.150.130 64 168 4.1E-6 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFUD_11040 da81853e416bc24b958764fbfdafc1df 339 SUPERFAMILY SSF56349 65 328 2.56E-48 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFUD_11040 da81853e416bc24b958764fbfdafc1df 339 Pfam PF00589 Phage integrase family 174 329 2.3E-15 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 XFUD_11040 da81853e416bc24b958764fbfdafc1df 339 Gene3D G3DSA:1.10.443.10 169 335 2.9E-29 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFUD_08385 be88e0e6e6347b8ff9b9041e55032608 197 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 83 156 1.1E-16 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XFUD_08385 be88e0e6e6347b8ff9b9041e55032608 197 Gene3D G3DSA:3.90.470.20 83 189 5.4E-21 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XFUD_08385 be88e0e6e6347b8ff9b9041e55032608 197 SUPERFAMILY SSF56214 83 191 7.67E-24 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XFUD_08385 be88e0e6e6347b8ff9b9041e55032608 197 SUPERFAMILY SSF56214 16 74 4.39E-8 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 XFUD_09110 8b75c4826a9e9585a21a15868c6f09b7 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 2.5E-6 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_09110 8b75c4826a9e9585a21a15868c6f09b7 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 44 8.3E-5 T 11-10-2018 IPR001451 Hexapeptide repeat XFUD_09110 8b75c4826a9e9585a21a15868c6f09b7 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 87 115 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 XFUD_09110 8b75c4826a9e9585a21a15868c6f09b7 186 SUPERFAMILY SSF51161 7 139 1.66E-29 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily XFUD_09110 8b75c4826a9e9585a21a15868c6f09b7 186 Gene3D G3DSA:2.160.10.10 1 182 5.8E-47 T 11-10-2018 XFUD_06830 c9d4e74de253cc367ba10da50d31d813 211 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 69 211 3.8E-24 T 11-10-2018 IPR018636 Protein of unknown function DUF2058 XFUD_11030 7b39ab98c0721accccd0a6a663a884c1 472 Gene3D G3DSA:3.40.50.300 243 469 8.8E-17 T 11-10-2018 XFUD_11030 7b39ab98c0721accccd0a6a663a884c1 472 SUPERFAMILY SSF52540 2 202 2.13E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11030 7b39ab98c0721accccd0a6a663a884c1 472 SUPERFAMILY SSF52540 117 454 4.06E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_11030 7b39ab98c0721accccd0a6a663a884c1 472 Gene3D G3DSA:3.40.50.10810 4 225 3.2E-23 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily XFUD_11030 7b39ab98c0721accccd0a6a663a884c1 472 SMART SM00487 2 188 5.8E-7 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain XFUD_11030 7b39ab98c0721accccd0a6a663a884c1 472 Pfam PF00176 SNF2 family N-terminal domain 25 265 4.7E-16 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 XFUD_01990 56aa142a04c18230ef36087f4a3597f1 390 SUPERFAMILY SSF56349 73 377 4.71E-29 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 XFUD_01990 56aa142a04c18230ef36087f4a3597f1 390 Gene3D G3DSA:1.10.150.130 73 191 3.1E-8 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal XFUD_01990 56aa142a04c18230ef36087f4a3597f1 390 Gene3D G3DSA:1.10.443.10 213 378 3.5E-9 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 XFUD_08850 86e7ef26c354ebb85a57a20dfaaafc9a 236 Gene3D G3DSA:1.20.910.10 1 234 2.7E-61 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 XFUD_08850 86e7ef26c354ebb85a57a20dfaaafc9a 236 SUPERFAMILY SSF48613 5 214 1.06E-30 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 XFUD_08850 86e7ef26c354ebb85a57a20dfaaafc9a 236 Pfam PF14518 Iron-containing redox enzyme 41 205 5.0E-23 T 11-10-2018 XFUD_02260 743c60694567c663f6e2d370a38bba91 113 SMART SM00530 57 111 2.3E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_02260 743c60694567c663f6e2d370a38bba91 113 Gene3D G3DSA:1.10.260.40 59 112 1.2E-9 T 11-10-2018 XFUD_02260 743c60694567c663f6e2d370a38bba91 113 SUPERFAMILY SSF47413 59 108 1.15E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_02260 743c60694567c663f6e2d370a38bba91 113 Pfam PF01381 Helix-turn-helix 59 109 6.6E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 XFUD_00935 b847ab7de4df551c3104146e5396b94f 384 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 367 1.8E-149 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XFUD_00935 b847ab7de4df551c3104146e5396b94f 384 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 365 1.1E-83 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XFUD_00935 b847ab7de4df551c3104146e5396b94f 384 SUPERFAMILY SSF51713 3 366 7.46E-148 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XFUD_00935 b847ab7de4df551c3104146e5396b94f 384 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 367 1.7E-143 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XFUD_00935 b847ab7de4df551c3104146e5396b94f 384 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 368 54.902 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XFUD_00935 b847ab7de4df551c3104146e5396b94f 384 Gene3D G3DSA:3.20.20.105 1 369 1.1E-152 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 XFUD_08720 abd8f9a46c1b1f239613d26e88dac86c 99 SUPERFAMILY SSF102829 7 95 3.79E-23 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily XFUD_08720 abd8f9a46c1b1f239613d26e88dac86c 99 Gene3D G3DSA:1.10.20.30 1 48 2.2E-16 T 11-10-2018 XFUD_08720 abd8f9a46c1b1f239613d26e88dac86c 99 Pfam PF05164 Cell division protein ZapA 7 91 1.7E-18 T 11-10-2018 IPR007838 Cell division protein ZapA-like XFUD_08520 9f0c09e5a56c5a867403873e0738c350 127 Pfam PF03692 Putative zinc- or iron-chelating domain 4 97 4.9E-14 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein XFUD_08930 c37a209535d561a7549ae26c35d4ae91 130 Pfam PF04956 TrbC/VIRB2 family 13 105 4.1E-17 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 XFUD_06230 49c975223868e4eb8837b0d9c065c44c 155 SUPERFAMILY SSF82199 4 150 5.36E-40 T 11-10-2018 XFUD_06230 49c975223868e4eb8837b0d9c065c44c 155 SMART SM00317 3 128 2.9E-30 T 11-10-2018 IPR001214 SET domain GO:0005515 XFUD_06230 49c975223868e4eb8837b0d9c065c44c 155 Pfam PF00856 SET domain 14 122 1.2E-17 T 11-10-2018 IPR001214 SET domain GO:0005515 XFUD_06230 49c975223868e4eb8837b0d9c065c44c 155 Gene3D G3DSA:2.170.270.10 1 155 2.7E-41 T 11-10-2018 XFUD_12285 177872055497571df561a1cc9a89c5dc 90 Pfam PF13828 Domain of unknown function (DUF4190) 11 74 8.1E-20 T 11-10-2018 IPR025241 Domain of unknown function DUF4190 XFUD_01190 d84bd00a12d92cf1a05fbe4400875690 371 Pfam PF01594 AI-2E family transporter 36 358 1.4E-43 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like XFUD_06120 9ea125f92e647ba2c30f9e29812c49e6 143 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 10 128 17.495 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 XFUD_06120 9ea125f92e647ba2c30f9e29812c49e6 143 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 11 123 2.9E-20 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 XFUD_00055 98d667ab306f1e453f13c87ee920dc4c 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 136 2.9E-26 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 XFUD_00055 98d667ab306f1e453f13c87ee920dc4c 140 Gene3D G3DSA:3.30.420.270 63 132 1.4E-8 T 11-10-2018 XFUD_05075 c93624fa1c656be974daf1b771cf7395 341 Pfam PF04332 Protein of unknown function (DUF475) 49 339 1.8E-133 T 11-10-2018 IPR007427 Protein of unknown function DUF475 XFUD_04445 f68b44a539facb604720c13cf760b90b 444 SMART SM00228 209 279 5.7E-4 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFUD_04445 f68b44a539facb604720c13cf760b90b 444 SMART SM00228 116 185 0.21 T 11-10-2018 IPR001478 PDZ domain GO:0005515 XFUD_04445 f68b44a539facb604720c13cf760b90b 444 SUPERFAMILY SSF50156 88 183 4.47E-11 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFUD_04445 f68b44a539facb604720c13cf760b90b 444 Pfam PF02163 Peptidase family M50 11 432 1.0E-76 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 XFUD_04445 f68b44a539facb604720c13cf760b90b 444 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 10 443 1.6E-101 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 XFUD_04445 f68b44a539facb604720c13cf760b90b 444 Gene3D G3DSA:2.30.42.10 133 216 2.4E-8 T 11-10-2018 XFUD_04445 f68b44a539facb604720c13cf760b90b 444 Gene3D G3DSA:2.30.42.10 221 303 1.3E-12 T 11-10-2018 XFUD_04445 f68b44a539facb604720c13cf760b90b 444 SUPERFAMILY SSF50156 210 288 3.94E-11 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 XFUD_08240 34c42fe5e522d4cdb18e8eedea9c8328 634 Pfam PF02705 K+ potassium transporter 23 555 9.4E-215 T 11-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 XFUD_08240 34c42fe5e522d4cdb18e8eedea9c8328 634 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 14 634 33.326 T 11-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup XFUD_12175 fd6a67906e42d8cefaebd433e25e70f8 90 Pfam PF04956 TrbC/VIRB2 family 3 85 1.9E-18 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 XFUD_02555 20992826c0e5c82fd4894fef1b59bf67 317 Gene3D G3DSA:3.90.550.10 2 214 3.9E-14 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_02555 20992826c0e5c82fd4894fef1b59bf67 317 SUPERFAMILY SSF53448 5 176 3.54E-15 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_02555 20992826c0e5c82fd4894fef1b59bf67 317 Pfam PF00535 Glycosyl transferase family 2 10 137 1.1E-13 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XFUD_08525 edae268ad7531dc182611ae1bcb2b6b1 301 Pfam PF00561 alpha/beta hydrolase fold 33 285 2.2E-24 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 XFUD_08525 edae268ad7531dc182611ae1bcb2b6b1 301 Gene3D G3DSA:3.40.50.1820 2 299 8.0E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_08525 edae268ad7531dc182611ae1bcb2b6b1 301 SUPERFAMILY SSF53474 5 299 9.15E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold XFUD_08525 edae268ad7531dc182611ae1bcb2b6b1 301 PRINTS PR00412 Epoxide hydrolase signature 38 56 7.6E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 XFUD_08525 edae268ad7531dc182611ae1bcb2b6b1 301 PRINTS PR00412 Epoxide hydrolase signature 274 296 7.6E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 XFUD_08525 edae268ad7531dc182611ae1bcb2b6b1 301 PRINTS PR00412 Epoxide hydrolase signature 112 125 7.6E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 XFUD_08115 2d2fb558b90956a8b8c14c059a306625 359 Pfam PF05707 Zonular occludens toxin (Zot) 1 187 5.1E-55 T 11-10-2018 IPR008900 Zona occludens toxin XFUD_08115 2d2fb558b90956a8b8c14c059a306625 359 Gene3D G3DSA:3.40.50.300 1 188 1.3E-45 T 11-10-2018 XFUD_05680 d338088f5b174057ffba742c66a1bf84 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 285 5.3E-35 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XFUD_05680 d338088f5b174057ffba742c66a1bf84 316 PIRSF PIRSF026649 1 296 1.1E-67 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 XFUD_05375 06ac232682ec2f8c4b06c3614e9ee775 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 4 92 17.454 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 XFUD_05375 06ac232682ec2f8c4b06c3614e9ee775 92 SUPERFAMILY SSF117991 7 92 7.06E-18 T 11-10-2018 IPR027471 YbeD-like domain superfamily XFUD_05375 06ac232682ec2f8c4b06c3614e9ee775 92 Pfam PF04359 Protein of unknown function (DUF493) 11 92 2.3E-19 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 XFUD_05375 06ac232682ec2f8c4b06c3614e9ee775 92 Gene3D G3DSA:3.30.70.260 4 92 2.1E-12 T 11-10-2018 XFUD_06935 1f7cff5cdac34ab9e09f4be10df2f3b9 274 SUPERFAMILY SSF53448 10 220 2.73E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_06935 1f7cff5cdac34ab9e09f4be10df2f3b9 274 Pfam PF00535 Glycosyl transferase family 2 13 137 2.1E-21 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XFUD_06935 1f7cff5cdac34ab9e09f4be10df2f3b9 274 Gene3D G3DSA:3.90.550.10 7 252 8.1E-39 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_02130 f7ca53d362c144c31defb9f31d26c7bd 70 Pfam PF05876 Phage terminase large subunit (GpA) 7 56 4.1E-12 T 11-10-2018 IPR008866 Bacteriophage lambda, GpA XFUD_09180 3c1444c9bcf49445855ed1d236d6ea31 170 SUPERFAMILY SSF69349 7 166 4.87E-37 T 11-10-2018 XFUD_09620 35ef5a0bd3ecdc79c84e14d509cccb4c 477 Gene3D G3DSA:1.20.1740.10 22 476 2.9E-123 T 11-10-2018 XFUD_09620 35ef5a0bd3ecdc79c84e14d509cccb4c 477 PIRSF PIRSF006060 8 477 1.9E-96 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XFUD_09620 35ef5a0bd3ecdc79c84e14d509cccb4c 477 Pfam PF13520 Amino acid permease 27 440 2.0E-61 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 XFUD_10620 585e9f6faadc667a38deadd8ac9ed9f3 90 Gene3D G3DSA:3.30.300.90 1 89 9.2E-25 T 11-10-2018 XFUD_10620 585e9f6faadc667a38deadd8ac9ed9f3 90 PIRSF PIRSF003113 1 90 6.9E-22 T 11-10-2018 IPR002634 BolA protein XFUD_10620 585e9f6faadc667a38deadd8ac9ed9f3 90 SUPERFAMILY SSF82657 4 85 2.09E-21 T 11-10-2018 IPR036065 BolA-like superfamily XFUD_10620 585e9f6faadc667a38deadd8ac9ed9f3 90 Pfam PF01722 BolA-like protein 12 83 9.7E-25 T 11-10-2018 IPR002634 BolA protein XFUD_08070 9288173175babd1927257fc6da45bf30 144 Pfam PF12472 Phage related protein 64 120 6.3E-19 T 11-10-2018 IPR021096 Vibrio phage VSK, Orf152 XFUD_00120 1621b80ef719e5f8b04dca9bf3e27206 158 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 10 129 3.2E-18 T 11-10-2018 IPR013362 Pilus modification type IV, PilV XFUD_00120 1621b80ef719e5f8b04dca9bf3e27206 158 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 31 6.9E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_11835 029caec001096644f04a593612a33320 233 Pfam PF07510 Protein of unknown function (DUF1524) 119 215 2.6E-12 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 XFUD_12325 f27344e440aecc9d9e3d1758842ca0ec 63 SUPERFAMILY SSF53041 8 38 4.58E-5 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 XFUD_12325 f27344e440aecc9d9e3d1758842ca0ec 63 Gene3D G3DSA:1.20.5.40 9 36 7.9E-6 T 11-10-2018 XFUD_07265 57ab4fc80863a13a4c1ed9de771d529a 213 Gene3D G3DSA:2.40.50.230 28 125 1.3E-25 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily XFUD_10260 44f55a81b5eb2e49e0e33811796444c5 510 Pfam PF13440 Polysaccharide biosynthesis protein 44 335 1.3E-78 T 11-10-2018 XFUD_11035 c928704f6e8ffb229bf9dc27c3b84324 82 Pfam PF13986 Domain of unknown function (DUF4224) 19 63 8.1E-18 T 11-10-2018 IPR025319 Domain of unknown function DUF4224 XFUD_03105 6d73006254f5a765f510c9027869f5ed 360 Pfam PF05954 Phage late control gene D protein (GPD) 36 320 1.1E-30 T 11-10-2018 XFUD_03105 6d73006254f5a765f510c9027869f5ed 360 SUPERFAMILY SSF69279 5 186 9.07E-13 T 11-10-2018 XFUD_09120 fd5d7b82e29f5515f2dd4f635d6fc732 295 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 5 265 29.706 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 XFUD_09120 fd5d7b82e29f5515f2dd4f635d6fc732 295 SUPERFAMILY SSF53335 10 206 3.35E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_09120 fd5d7b82e29f5515f2dd4f635d6fc732 295 Gene3D G3DSA:3.40.50.150 11 172 1.0E-31 T 11-10-2018 XFUD_09120 fd5d7b82e29f5515f2dd4f635d6fc732 295 Pfam PF08241 Methyltransferase domain 51 147 3.1E-19 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 XFUD_09120 fd5d7b82e29f5515f2dd4f635d6fc732 295 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 13 264 7.5E-68 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 XFUD_08120 60f136d561ab227bb3a9ec50aba98925 94 Pfam PF10734 Protein of unknown function (DUF2523) 5 83 1.1E-17 T 11-10-2018 IPR019670 Protein of unkown function DUF2523 XFUD_09905 625832884d13ee89e89360383afe2805 240 SUPERFAMILY SSF53448 5 228 3.17E-38 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_09905 625832884d13ee89e89360383afe2805 240 Pfam PF00535 Glycosyl transferase family 2 7 168 6.9E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 XFUD_09905 625832884d13ee89e89360383afe2805 240 Gene3D G3DSA:3.90.550.10 2 232 2.0E-30 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases XFUD_06210 08f78eb65b77e9255cd4ba71496e305b 422 Pfam PF01458 Uncharacterized protein family (UPF0051) 170 392 1.6E-61 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 XFUD_06210 08f78eb65b77e9255cd4ba71496e305b 422 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 133 402 1.3E-78 T 11-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 XFUD_06210 08f78eb65b77e9255cd4ba71496e305b 422 SUPERFAMILY SSF101960 19 414 1.23E-91 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily XFUD_12355 f4ba2616738712549298ccc22f2459e9 257 SUPERFAMILY SSF101082 31 226 9.15E-32 T 11-10-2018 XFUD_12355 f4ba2616738712549298ccc22f2459e9 257 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 14 257 4.3E-49 T 11-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ XFUD_07860 a948f2898f212865336d98fa0a9dbc7c 169 Pfam PF02620 Uncharacterized ACR, COG1399 62 167 3.4E-10 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD XFUD_10545 2eea3c7449d68c62b2d72095ec911dfc 325 Pfam PF00953 Glycosyl transferase family 4 77 214 2.2E-25 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 XFUD_02510 7a8f814c8e40731e6e65bb5d75f2afb0 130 Gene3D G3DSA:1.20.1270.390 31 128 7.4E-10 T 11-10-2018 XFUD_02510 7a8f814c8e40731e6e65bb5d75f2afb0 130 Pfam PF14346 Domain of unknown function (DUF4398) 24 121 2.0E-18 T 11-10-2018 IPR025511 Domain of unknown function DUF4398 XFUD_01665 0aa1bec8b855a8eba30ce3e57291d1db 71 Gene3D G3DSA:1.10.10.1100 1 55 4.1E-11 T 11-10-2018 XFUD_01665 0aa1bec8b855a8eba30ce3e57291d1db 71 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 48 1.5E-9 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain XFUD_07435 28cd48f6f4350852df92cbee312a1c34 357 SUPERFAMILY SSF50952 27 325 3.66E-34 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 XFUD_07435 28cd48f6f4350852df92cbee312a1c34 357 Pfam PF07995 Glucose / Sorbosone dehydrogenase 50 338 4.9E-60 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase XFUD_07435 28cd48f6f4350852df92cbee312a1c34 357 Gene3D G3DSA:2.120.10.30 22 356 1.5E-86 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like XFUD_06090 14cd5db0b1d15c2b37f8eb978d351083 377 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 11 376 7.3E-134 T 11-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition XFUD_06090 14cd5db0b1d15c2b37f8eb978d351083 377 SUPERFAMILY SSF55729 179 354 2.07E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFUD_03230 e2fe8d80fdaff68bce03b3019902d53d 261 Pfam PF01925 Sulfite exporter TauE/SafE 11 250 3.4E-45 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 XFUD_04595 c1c2e15121da2071819d27ef22f52643 220 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 187 6.3E-31 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel XFUD_06630 a3e6d943918bdc2aea0fc3d3a1ddc189 109 Pfam PF16083 LydA holin phage, holin superfamily III 15 90 3.1E-18 T 11-10-2018 IPR032126 LydA-like holin XFUD_07120 a3e6d943918bdc2aea0fc3d3a1ddc189 109 Pfam PF16083 LydA holin phage, holin superfamily III 15 90 3.1E-18 T 11-10-2018 IPR032126 LydA-like holin XFUD_11875 e4ca7d8584159187ff30c6ee07aadda8 510 Pfam PF11855 Protein of unknown function (DUF3375) 9 487 5.9E-153 T 11-10-2018 IPR021804 Protein of unknown function DUF3375 XFUD_06005 6c2f346865a85761622228396a72242c 297 Pfam PF00520 Ion transport protein 34 239 5.0E-30 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 XFUD_06005 6c2f346865a85761622228396a72242c 297 Gene3D G3DSA:1.10.287.70 34 246 2.2E-53 T 11-10-2018 XFUD_06005 6c2f346865a85761622228396a72242c 297 SUPERFAMILY SSF81324 30 244 4.28E-53 T 11-10-2018 XFUD_06005 6c2f346865a85761622228396a72242c 297 PRINTS PR00169 Potassium channel signature 95 115 3.6E-28 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XFUD_06005 6c2f346865a85761622228396a72242c 297 PRINTS PR00169 Potassium channel signature 27 55 3.6E-28 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XFUD_06005 6c2f346865a85761622228396a72242c 297 PRINTS PR00169 Potassium channel signature 160 183 3.6E-28 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XFUD_06005 6c2f346865a85761622228396a72242c 297 PRINTS PR00169 Potassium channel signature 189 211 3.6E-28 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XFUD_06005 6c2f346865a85761622228396a72242c 297 PRINTS PR00169 Potassium channel signature 218 244 3.6E-28 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XFUD_06005 6c2f346865a85761622228396a72242c 297 PRINTS PR00169 Potassium channel signature 131 157 3.6E-28 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XFUD_06005 6c2f346865a85761622228396a72242c 297 PRINTS PR00169 Potassium channel signature 69 92 3.6E-28 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 XFUD_04480 ea910e686ace23fbcc3f1ff4e303a5f7 106 PIRSF PIRSF028538 1 106 1.1E-45 T 11-10-2018 IPR014949 Protein of unknown function DUF1820 XFUD_04480 ea910e686ace23fbcc3f1ff4e303a5f7 106 Pfam PF08850 Domain of unknown function (DUF1820) 5 99 6.6E-38 T 11-10-2018 IPR014949 Protein of unknown function DUF1820 XFUD_07960 6b4591ffd2148a95901c65ebd00b8eae 283 PIRSF PIRSF028477 3 283 7.0E-135 T 11-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 XFUD_07960 6b4591ffd2148a95901c65ebd00b8eae 283 Pfam PF09916 Uncharacterized protein conserved in bacteria (DUF2145) 54 256 3.3E-74 T 11-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 XFUD_10995 613ede3c991e991b8b1fd44d4ac7c6ba 425 Pfam PF10926 Protein of unknown function (DUF2800) 4 391 1.2E-117 T 11-10-2018 IPR021229 Protein of unknown function DUF2800 XFUD_01890 69f697e2046d4b4108fcd22fe7e62684 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 4 59 3.6E-15 T 11-10-2018 IPR019201 Protein of unknown function DUF2065 XFUD_06750 dd48b12d09e5f774840b48ddc22737fd 84 SUPERFAMILY SSF47598 2 69 1.89E-20 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 XFUD_06750 dd48b12d09e5f774840b48ddc22737fd 84 Gene3D G3DSA:1.10.1220.10 10 59 1.5E-22 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 XFUD_11000 a5e2b55039da062833fbefa6e0e2f24a 188 SUPERFAMILY SSF50249 6 169 1.88E-10 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold XFUD_11000 a5e2b55039da062833fbefa6e0e2f24a 188 Pfam PF10991 Protein of unknown function (DUF2815) 2 173 6.0E-47 T 11-10-2018 IPR022595 Protein of unknown function DUF2815 XFUD_11000 a5e2b55039da062833fbefa6e0e2f24a 188 Gene3D G3DSA:2.40.50.140 1 172 2.8E-48 T 11-10-2018 XFUD_05865 eb65ab3364b0068aa349f43018dea47e 277 Pfam PF13649 Methyltransferase domain 56 150 3.3E-15 T 11-10-2018 XFUD_05865 eb65ab3364b0068aa349f43018dea47e 277 SUPERFAMILY SSF53335 35 270 1.98E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase XFUD_05865 eb65ab3364b0068aa349f43018dea47e 277 Gene3D G3DSA:3.40.50.150 28 274 1.8E-31 T 11-10-2018 XFUD_04880 8b22349327f6629b7a570011e02bfc06 202 SUPERFAMILY SSF52166 10 201 9.29E-57 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 XFUD_04880 8b22349327f6629b7a570011e02bfc06 202 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 14 199 7.6E-60 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04880 8b22349327f6629b7a570011e02bfc06 202 Pfam PF00573 Ribosomal protein L4/L1 family 13 199 9.5E-52 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 XFUD_04880 8b22349327f6629b7a570011e02bfc06 202 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 202 27.319 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 XFUD_04880 8b22349327f6629b7a570011e02bfc06 202 Gene3D G3DSA:3.40.1370.10 7 202 2.1E-53 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 XFUD_07130 122b394271ca1fc47d943543b52600fe 70 ProDom PD272324 XF1567/XF1672 1 70 5.0E-34 T 11-10-2018 IPR020247 Uncharacterised protein family XF1567 XFUD_06640 122b394271ca1fc47d943543b52600fe 70 ProDom PD272324 XF1567/XF1672 1 70 5.0E-34 T 11-10-2018 IPR020247 Uncharacterised protein family XF1567 XFUD_03335 c7c23e01687f474d914949955b5d07b1 264 Hamap MF_00443 Thiazole synthase [thiG]. 9 264 42.354 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 XFUD_03335 c7c23e01687f474d914949955b5d07b1 264 Pfam PF05690 Thiazole biosynthesis protein ThiG 12 258 8.5E-110 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 XFUD_03335 c7c23e01687f474d914949955b5d07b1 264 Gene3D G3DSA:3.20.20.70 2 264 1.2E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 XFUD_03335 c7c23e01687f474d914949955b5d07b1 264 SUPERFAMILY SSF110399 8 250 7.72E-88 T 11-10-2018 XFUD_03240 14b3db870b1fe31084d97d840a7262f9 135 Pfam PF04143 Sulphur transport 4 124 1.5E-9 T 11-10-2018 IPR007272 Sulphur transport domain XFUD_06775 942fddabbaef642b688f914adaa18595 117 SUPERFAMILY SSF160719 24 106 2.62E-6 T 11-10-2018 XFUD_09410 1aa61b1fb83b3957ea880c5623cc1bc6 201 Pfam PF06197 Protein of unknown function (DUF998) 13 194 1.5E-23 T 11-10-2018 IPR009339 Protein of unknown function DUF998 XFUD_10780 e487dc5d1e9c9605419aec3618e7aee2 95 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 20 93 8.3E-14 T 11-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative XFUD_06720 d13f461da5f10d7d603a092aaa149768 498 Pfam PF11863 Protein of unknown function (DUF3383) 5 496 2.0E-155 T 11-10-2018 IPR021808 Protein of unknown function DUF3383 XFUD_07215 d13f461da5f10d7d603a092aaa149768 498 Pfam PF11863 Protein of unknown function (DUF3383) 5 496 2.0E-155 T 11-10-2018 IPR021808 Protein of unknown function DUF3383 XFUD_02290 d1e9cb7d9e99b026422be32b5e1f4a90 122 SUPERFAMILY SSF53955 2 109 8.19E-21 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_02290 d1e9cb7d9e99b026422be32b5e1f4a90 122 Gene3D G3DSA:3.30.910.40 28 102 4.4E-10 T 11-10-2018 XFUD_10935 48ef8516949a82a8eda9563684090da3 66 SUPERFAMILY SSF47413 1 59 9.0E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 XFUD_10935 48ef8516949a82a8eda9563684090da3 66 Gene3D G3DSA:1.10.260.40 2 66 1.6E-10 T 11-10-2018 XFUD_08905 652537155631da910179b4bdffe8e7fc 158 Pfam PF07283 Conjugal transfer protein TrbH 33 158 3.9E-54 T 11-10-2018 IPR010837 Conjugal transfer, TrbH XFUD_02185 be4e79318e82b0213a3a7de95e5083ca 249 PIRSF PIRSF028589 1 249 1.0E-115 T 11-10-2018 IPR016893 Protein of unknown function UCP028589 XFUD_07690 ef1abc845d8fc1438467b42edf4168e7 186 Pfam PF11198 Protein of unknown function (DUF2857) 8 182 2.3E-62 T 11-10-2018 IPR021364 Protein of unknown function DUF2857 XFUD_03885 4a17d8cae6f44df87070415e670c965a 297 Gene3D G3DSA:1.10.530.10 158 290 1.6E-41 T 11-10-2018 XFUD_03885 4a17d8cae6f44df87070415e670c965a 297 Pfam PF01464 Transglycosylase SLT domain 172 267 8.2E-27 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 XFUD_03885 4a17d8cae6f44df87070415e670c965a 297 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 187 215 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 XFUD_03885 4a17d8cae6f44df87070415e670c965a 297 SUPERFAMILY SSF53955 161 289 1.47E-44 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_08950 3197cb784c234fa22908978c7b973058 120 PIRSF PIRSF017849 1 119 7.8E-53 T 11-10-2018 IPR016703 Conjugal transfer, TraD, beta/gamma-type XFUD_04545 9804174ba8382f5e9594dbd491ed3cf6 72 Pfam PF07896 Protein of unknown function (DUF1674) 42 72 2.0E-13 T 11-10-2018 IPR012875 Protein of unknown function DUF1674 XFUD_00125 39cae5cf6de1599ed3adb7518e5fa209 316 Pfam PF16074 Type IV Pilus-assembly protein W 220 300 5.1E-7 T 11-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 XFUD_00125 39cae5cf6de1599ed3adb7518e5fa209 316 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 34 1.3E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site XFUD_12365 ced63ef9083b04b3c1dd044272e4bd0a 158 Pfam PF07283 Conjugal transfer protein TrbH 33 158 4.9E-53 T 11-10-2018 IPR010837 Conjugal transfer, TrbH XFUD_02875 af1ba57fd84e6513e00b2c9fdc955975 425 Pfam PF10926 Protein of unknown function (DUF2800) 4 391 2.0E-117 T 11-10-2018 IPR021229 Protein of unknown function DUF2800 XFUD_03805 130ae37544987f65909e5b44a9ede3ed 282 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 282 1.1E-151 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFUD_10840 ecc18c9b7b8412b16951ccff4aae757b 107 Gene3D G3DSA:2.40.10.180 11 107 1.2E-5 T 11-10-2018 XFUD_03025 ecc18c9b7b8412b16951ccff4aae757b 107 Gene3D G3DSA:2.40.10.180 11 107 1.2E-5 T 11-10-2018 XFUD_07535 37a56c27583451bd409d42fc42367b0c 209 Pfam PF08808 RES domain 28 179 1.3E-20 T 11-10-2018 IPR014914 RES domain XFUD_07535 37a56c27583451bd409d42fc42367b0c 209 SMART SM00953 27 174 1.3E-13 T 11-10-2018 IPR014914 RES domain XFUD_00540 1bf01a356eee1d714032d042f85ee4d4 324 Pfam PF05275 Copper resistance protein B precursor (CopB) 124 324 1.4E-66 T 11-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 XFUD_03825 fb0c7bf6794d8fc8abf53e730faec2e5 283 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 283 9.4E-141 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFUD_03455 cb5af63219e80bede2c0dc0eab1b58f6 218 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 213 3.4E-50 T 11-10-2018 IPR018648 Protein of unknown function DUF2076 XFUD_12185 5aea5b517964cf7366eb4399800a186f 815 Gene3D G3DSA:3.40.50.300 600 780 9.2E-24 T 11-10-2018 XFUD_12185 5aea5b517964cf7366eb4399800a186f 815 SUPERFAMILY SSF52540 411 774 6.39E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase XFUD_12185 5aea5b517964cf7366eb4399800a186f 815 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 12 808 8.8E-247 T 11-10-2018 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 XFUD_12185 5aea5b517964cf7366eb4399800a186f 815 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 180 382 6.9E-44 T 11-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 XFUD_02205 1be171f4d027b848411c274fed50e048 480 Pfam PF09356 Phage conserved hypothetical protein BR0599 396 468 1.2E-9 T 11-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal XFUD_02205 1be171f4d027b848411c274fed50e048 480 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 3 170 7.8E-36 T 11-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal XFUD_11010 34a58919996d6285c6c38b9b5d9da130 250 Pfam PF02498 BRO family, N-terminal domain 11 98 1.3E-24 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_11010 34a58919996d6285c6c38b9b5d9da130 250 SMART SM01040 10 98 5.6E-38 T 11-10-2018 IPR003497 BRO N-terminal domain XFUD_07935 f4b426208f94f0fdbc0cf7210880229d 215 Pfam PF02036 SCP-2 sterol transfer family 22 123 6.8E-16 T 11-10-2018 IPR003033 SCP2 sterol-binding domain XFUD_08690 a9f3680af793382ff306f7b08af84a0b 445 Pfam PF07793 Protein of unknown function (DUF1631) 4 439 1.3E-75 T 11-10-2018 IPR012434 Protein of unknown function DUF1631 XFUD_08430 a4adf6e62498f6da20c50bf4d209d32e 145 Pfam PF06903 VirK protein 29 124 2.1E-31 T 11-10-2018 IPR010694 Uncharacterised protein family VirK XFUD_01755 3ef80fc46b4ecdbdb938e6a8a45c807d 249 Pfam PF02405 Permease MlaE 35 245 3.1E-65 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 XFUD_01755 3ef80fc46b4ecdbdb938e6a8a45c807d 249 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 6 249 4.7E-69 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria XFUD_03085 d7a1bd461538833be4e425c2b4083e5c 95 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 20 93 8.3E-14 T 11-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative XFUD_01425 c0e93153fe4f89237838eb153d01dbfb 291 Pfam PF07282 Putative transposase DNA-binding domain 248 288 7.8E-9 T 11-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal XFUD_01425 c0e93153fe4f89237838eb153d01dbfb 291 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 205 273 6.1E-7 T 11-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal XFUD_01425 c0e93153fe4f89237838eb153d01dbfb 291 Pfam PF01385 Probable transposase 120 234 3.7E-24 T 11-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 XFUD_01365 04368c222372703e0a3fa4725595e20b 222 Gene3D G3DSA:1.20.120.1200 5 170 3.4E-40 T 11-10-2018 XFUD_01365 04368c222372703e0a3fa4725595e20b 222 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 22 168 3.0E-35 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 XFUD_08090 a63247085b4fa089e1acce8fb0563b23 94 Pfam PF10734 Protein of unknown function (DUF2523) 5 83 9.8E-19 T 11-10-2018 IPR019670 Protein of unkown function DUF2523 XFUD_01560 96b62a9eb4015e4fadd10be912a410f0 220 Pfam PF05137 Fimbrial assembly protein (PilN) 100 184 2.7E-27 T 11-10-2018 IPR007813 Fimbrial assembly PilN XFUD_12060 b9160748ca81fe0cf68c87e47476a2bf 126 Gene3D G3DSA:1.10.3510.10 2 124 2.0E-13 T 11-10-2018 IPR023138 NMB0513-like superfamily XFUD_12060 b9160748ca81fe0cf68c87e47476a2bf 126 Pfam PF04591 Protein of unknown function, DUF596 56 124 8.7E-23 T 11-10-2018 IPR007670 Protein of unknown function DUF596 XFUD_12060 b9160748ca81fe0cf68c87e47476a2bf 126 SUPERFAMILY SSF160472 1 119 1.03E-35 T 11-10-2018 IPR023138 NMB0513-like superfamily XFUD_08810 aa50726b75182497f424ff65b6f508bd 102 Gene3D G3DSA:3.30.2310.20 1 98 1.4E-19 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily XFUD_08810 aa50726b75182497f424ff65b6f508bd 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 92 1.8E-10 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family XFUD_02850 eb105ffb594d7ccfadd70cb026bb6b71 142 Gene3D G3DSA:3.90.20.10 45 136 2.2E-7 T 11-10-2018 XFUD_12405 4b1b9f308c961061d5577954b9958c85 177 Pfam PF05713 Bacterial mobilisation protein (MobC) 118 157 7.0E-8 T 11-10-2018 IPR008687 Bacterial mobilisation XFUD_10590 80920dc85923f8a133c790207416f8f8 405 Pfam PF01963 TraB family 19 240 9.8E-27 T 11-10-2018 IPR002816 Pheromone shutdown, TraB XFUD_10590 80920dc85923f8a133c790207416f8f8 405 TIGRFAM TIGR00261 traB: TraB family protein 28 401 8.3E-80 T 11-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal XFUD_06535 fc53d02c2ba047523adafcb96a82463a 153 Pfam PF05433 Glycine zipper 2TM domain 61 107 8.9E-11 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 XFUD_03090 1b4bfb63ab8559f84be47da5075d0417 739 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 117 480 5.0E-66 T 11-10-2018 IPR010090 Phage tail tape measure protein XFUD_03090 1b4bfb63ab8559f84be47da5075d0417 739 Pfam PF10145 Phage-related minor tail protein 162 373 4.1E-33 T 11-10-2018 IPR010090 Phage tail tape measure protein XFUD_01395 a0b4754257a6c0fdba6fbd9bea5d8c8c 443 Pfam PF03600 Citrate transporter 13 387 8.4E-55 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 XFUD_01395 a0b4754257a6c0fdba6fbd9bea5d8c8c 443 TIGRFAM TIGR00784 citMHS: citrate transporter 1 436 5.4E-189 T 11-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 XFUD_08845 79c744c8645dadde0511bd0400bd0305 366 Pfam PF11899 Protein of unknown function (DUF3419) 5 321 1.3E-24 T 11-10-2018 IPR021829 Protein of unknown function DUF3419 XFUD_02225 36369e4c5853629a3a78433de662ab65 170 SUPERFAMILY SSF69349 7 166 3.06E-37 T 11-10-2018 XFUD_03390 f5558f176c446f2eb98b79eebe09d51d 423 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 19 372 1.2E-124 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_03390 f5558f176c446f2eb98b79eebe09d51d 423 Pfam PF01098 Cell cycle protein 23 372 6.5E-102 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_03390 f5558f176c446f2eb98b79eebe09d51d 423 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 17 381 37.787 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 XFUD_05500 a936f40ecf41802792f2428fed2a5931 420 Pfam PF12821 Threonine/Serine exporter, ThrE 290 411 4.2E-15 T 11-10-2018 IPR024528 Threonine/Serine exporter, ThrE XFUD_05500 a936f40ecf41802792f2428fed2a5931 420 Pfam PF06738 Putative threonine/serine exporter 21 263 1.8E-53 T 11-10-2018 IPR010619 Putative threonine/serine exporter XFUD_06450 fddf647dbcf1a8366a49eb4639aebdd8 210 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 77 191 1.2E-25 T 11-10-2018 IPR034756 Type II secretion system (T2SS), protein M subtype b XFUD_00930 c5b57c64a7f658104dda74a4dc733b93 584 Pfam PF05960 Bacterial protein of unknown function (DUF885) 50 564 3.1E-144 T 11-10-2018 IPR010281 Protein of unknown function DUF885 XFUD_02675 40a564abcb43771ce5b5d59677518d03 283 Pfam PF12183 Restriction endonuclease NotI 6 253 8.0E-55 T 11-10-2018 IPR022009 Restriction endonuclease, type II, NotI XFUD_00840 9a8a7fef812cdc171872f6121f1b4d60 209 Pfam PF01553 Acyltransferase 56 168 2.5E-13 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XFUD_00840 9a8a7fef812cdc171872f6121f1b4d60 209 SMART SM00563 59 171 9.0E-32 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 XFUD_00840 9a8a7fef812cdc171872f6121f1b4d60 209 SUPERFAMILY SSF69593 34 182 2.22E-20 T 11-10-2018 XFUD_02560 fdc86aba30a6af55c34f3578c0e1ee5e 137 Pfam PF04138 GtrA-like protein 20 136 6.4E-15 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 XFUD_03220 675a2b277be7fc783ea76aceeada87b9 320 Pfam PF07920 Protein of unknown function (DUF1684) 175 311 1.8E-41 T 11-10-2018 IPR012467 Protein of unknown function DUF1684 XFUD_09080 d6fc2692bc609fce35d725e5169c1a64 319 Pfam PF06189 5'-nucleotidase 39 316 3.3E-104 T 11-10-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 XFUD_11880 421721b9eab59f2961d43e1f4f3378fe 237 Pfam PF13835 Domain of unknown function (DUF4194) 31 200 3.3E-42 T 11-10-2018 IPR025449 Protein of unknown function DUF4194 XFUD_07965 2059daff6d0035bed02d48cf607a1307 319 Pfam PF06258 Mitochondrial fission ELM1 19 314 2.4E-75 T 11-10-2018 IPR009367 Mitochondrial fission protein ELM1-like XFUD_05395 1fa68ac1f169e18795214d3caaef53bd 439 Pfam PF04286 Protein of unknown function (DUF445) 55 429 1.3E-103 T 11-10-2018 IPR007383 Protein of unknown function DUF445 XFUD_07090 aa91d17e37c7e60763e0fd6468fe0ee6 362 Pfam PF07120 Protein of unknown function (DUF1376) 2 87 2.1E-33 T 11-10-2018 IPR010781 Protein of unknown function DUF1376 XFUD_08960 438f27e5f7c3f9a91d91eb9a18cc223d 69 ProDom PD028710 PLASMID KORC REPRESSOR TRANSCRIPTIONAL TRANSCRIPTION DNA-BINDING REGULATION KLCC 4 69 2.0E-30 T 11-10-2018 IPR020136 Transcriptional repressor KorC XFUD_09250 88a36873ddb22209cec5edad23193cfd 74 Pfam PF13986 Domain of unknown function (DUF4224) 15 57 1.5E-14 T 11-10-2018 IPR025319 Domain of unknown function DUF4224 XFUD_03430 c355ac5043ac865d6ed8a98dc291d19c 146 Pfam PF05258 Protein of unknown function (DUF721) 21 92 6.0E-12 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 XFUD_08655 c4b4bd431992a4be8037ed9a7f46d0e6 219 Pfam PF11906 Protein of unknown function (DUF3426) 74 218 2.7E-33 T 11-10-2018 IPR021834 Protein of unknown function DUF3426 XFUD_02190 df700d3da5739c2b821c2ebcda15fe77 148 SUPERFAMILY SSF55729 22 89 6.67E-5 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase XFUD_12340 025ce9261aa90aeee01df9bc5130dc1d 199 SUPERFAMILY SSF53955 7 124 3.13E-24 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily XFUD_03990 95268c9ef51bd26614bce0e8f5ccb5a6 571 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 224 1.1E-19 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like XFUD_03855 d5e71d555e62a51b18cf84130b744d50 366 Pfam PF13387 Domain of unknown function (DUF4105) 10 130 4.4E-11 T 11-10-2018 IPR025178 Domain of unknown function DUF4105 XFUD_07270 49efef0310a4bf18353730b80c940276 117 SUPERFAMILY SSF160719 25 106 9.29E-6 T 11-10-2018 XFUD_02450 f6e839abdd8820c315b9f5c9447bb6c0 387 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 53 290 6.4E-61 T 11-10-2018 IPR018642 Protein of unknown function DUF2066 XFUD_01845 39b4cf0827b1494d7b8460903f5bdf4d 125 Pfam PF13511 Domain of unknown function (DUF4124) 8 50 5.0E-13 T 11-10-2018 IPR025392 Domain of unknown function DUF4124 XFUD_05715 4b4828e78c59cf725b2036444a6e830e 387 Pfam PF02628 Cytochrome oxidase assembly protein 137 377 1.1E-45 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 XFUD_05715 4b4828e78c59cf725b2036444a6e830e 387 Pfam PF02628 Cytochrome oxidase assembly protein 15 122 2.4E-19 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 XFUD_09130 cfbbce11e67a95992595afc66d7361b6 202 Pfam PF02698 DUF218 domain 45 189 1.9E-28 T 11-10-2018 IPR003848 Domain of unknown function DUF218 XFUD_07045 25d80c79bc08f34840b47cf9aef6692e 224 SUPERFAMILY SSF51306 117 216 1.13E-12 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily XFUD_07045 25d80c79bc08f34840b47cf9aef6692e 224 Pfam PF00717 Peptidase S24-like 140 204 4.1E-8 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C XFUD_07560 842bbebb15be42154b9a886b02e945d5 220 Pfam PF11679 Protein of unknown function (DUF3275) 14 213 1.0E-90 T 11-10-2018 IPR021693 Protein of unknown function DUF3275 XFUD_07765 6e0535e9b802d4d900be5fed9588643c 326 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 17 322 6.0E-12 T 11-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX XFUD_11150 214b704715d617b1cd5cd94bfd72ad2a 229 Pfam PF11218 Protein of unknown function (DUF3011) 32 226 1.8E-90 T 11-10-2018 IPR021381 Protein of unknown function DUF3011 XFUD_11335 4e9a1b8b5aeecdf50fef1f35fdec708f 192 Pfam PF13211 Protein of unknown function (DUF4019) 75 181 1.1E-26 T 11-10-2018 IPR025091 Protein of unknown function DUF4019 XFUD_03815 fa7ffa17a467fff3cc02d90d1f0a805a 282 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 282 9.2E-145 T 11-10-2018 IPR008487 Protein of unknown function DUF769 XFUD_00300 d9d15fec892c6c168a0e50505b0176c7 265 Pfam PF01578 Cytochrome C assembly protein 19 243 1.1E-37 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 XFUD_04040 be1161f8e3873f601c3cc3c480d33752 152 Pfam PF04134 Protein of unknown function, DUF393 26 135 3.5E-32 T 11-10-2018 IPR007263 Protein of unknown function DUF393 XFUD_06265 8d57cfd86d059a6ec9cc257e57e3bace 451 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 46 443 5.8E-95 T 11-10-2018 IPR018721 Protein of unknown function DUF2252 XFUD_09945 c152c37a0d3eca97650f0903edd75d0d 98 Pfam PF13986 Domain of unknown function (DUF4224) 25 68 5.1E-20 T 11-10-2018 IPR025319 Domain of unknown function DUF4224 XFUD_10555 7aad03e7b8291ddb60e20dd1ff062970 98 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 80 5.8E-9 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 XFUD_12445 c5620c5714a8ec944aae5c8ecaed00ab 278 Pfam PF13708 Domain of unknown function (DUF4942) 79 271 1.3E-64 T 11-10-2018 IPR031339 Domain of unknown function DUF4942 XFUD_06610 aa4347ec705968c33c867153936a92a9 232 SUPERFAMILY SSF57938 147 186 4.71E-5 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily