locus-tag class description IUD21_00005 PF11638 DnaA N-terminal domain IUD21_00005 PF08299 Bacterial dnaA protein helix-turn-helix IUD21_00005 PF00308 Bacterial dnaA protein IUD21_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain IUD21_00010 PF02767 DNA polymerase III beta subunit, central domain IUD21_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain IUD21_00015 PF02463 RecF/RecN/SMC N terminal domain IUD21_00020 PF01751 Toprim domain IUD21_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_00020 PF18053 DNA gyrase B subunit insert domain IUD21_00020 PF00986 DNA gyrase B subunit, carboxyl terminus IUD21_00020 PF00204 DNA gyrase B IUD21_00030 PF01435 Peptidase family M48 IUD21_00040 PF03544 Gram-negative bacterial TonB protein C-terminal IUD21_00045 PF01618 MotA/TolQ/ExbB proton channel family IUD21_00050 PF02472 Biopolymer transport protein ExbD/TolR IUD21_00055 PF02472 Biopolymer transport protein ExbD/TolR IUD21_00060 PF00326 Prolyl oligopeptidase family IUD21_00060 PF07676 WD40-like Beta Propeller Repeat IUD21_00070 PF01218 Coproporphyrinogen III oxidase IUD21_00090 PF00793 DAHP synthetase I family IUD21_00115 PF05567 Neisseria PilC beta-propeller domain IUD21_00125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IUD21_00130 PF00155 Aminotransferase class I and II IUD21_00135 PF01741 Large-conductance mechanosensitive channel, MscL IUD21_00150 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IUD21_00160 PF00271 Helicase conserved C-terminal domain IUD21_00160 PF00270 DEAD/DEAH box helicase IUD21_00160 PF17757 UvrB interaction domain IUD21_00160 PF02559 CarD-like/TRCF domain IUD21_00160 PF03461 TRCF domain IUD21_00165 PF01220 Dehydroquinase class II IUD21_00170 PF00364 Biotin-requiring enzyme IUD21_00175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IUD21_00175 PF02785 Biotin carboxylase C-terminal domain IUD21_00175 PF00289 Biotin carboxylase, N-terminal domain IUD21_00180 PF13361 UvrD-like helicase C-terminal domain IUD21_00180 PF00580 UvrD/REP helicase N-terminal domain IUD21_00185 PF00970 Oxidoreductase FAD-binding domain IUD21_00185 PF00042 Globin IUD21_00185 PF00175 Oxidoreductase NAD-binding domain IUD21_00195 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IUD21_00200 PF08535 KorB domain IUD21_00200 PF06613 KorB C-terminal beta-barrel domain IUD21_00200 PF02195 ParB-like nuclease domain IUD21_00210 PF00156 Phosphoribosyl transferase domain IUD21_00215 PF06968 Biotin and Thiamin Synthesis associated domain IUD21_00215 PF04055 Radical SAM superfamily IUD21_00220 PF01734 Patatin-like phospholipase IUD21_00225 PF01040 UbiA prenyltransferase family IUD21_00260 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IUD21_00260 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IUD21_00265 PF01578 Cytochrome C assembly protein IUD21_00270 PF02881 SRP54-type protein, helical bundle domain IUD21_00270 PF00448 SRP54-type protein, GTPase domain IUD21_00270 PF02978 Signal peptide binding domain IUD21_00290 PF13953 PapC C-terminal domain IUD21_00290 PF13954 PapC N-terminal domain IUD21_00290 PF00577 Outer membrane usher protein IUD21_00295 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IUD21_00295 PF02753 Pili assembly chaperone PapD, C-terminal domain IUD21_00300 PF16970 Type-1 fimbrial protein, A IUD21_00310 PF02464 Competence-damaged protein IUD21_00315 PF00083 Sugar (and other) transporter IUD21_00320 PF01926 50S ribosome-binding GTPase IUD21_00320 PF13167 GTP-binding GTPase N-terminal IUD21_00320 PF16360 GTP-binding GTPase Middle Region IUD21_00325 PF17209 Hfq protein IUD21_00335 PF00809 Pterin binding enzyme IUD21_00340 PF17862 AAA+ lid domain IUD21_00340 PF01434 Peptidase family M41 IUD21_00340 PF00004 ATPase family associated with various cellular activities (AAA) IUD21_00340 PF06480 FtsH Extracellular IUD21_00345 PF01728 FtsJ-like methyltransferase IUD21_00350 PF01985 CRS1 / YhbY (CRM) domain IUD21_00360 PF00920 Dehydratase family IUD21_00380 PF03279 Bacterial lipid A biosynthesis acyltransferase IUD21_00385 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IUD21_00395 PF00886 Ribosomal protein S16 IUD21_00400 PF01782 RimM N-terminal domain IUD21_00400 PF05239 PRC-barrel domain IUD21_00405 PF01746 tRNA (Guanine-1)-methyltransferase IUD21_00410 PF01245 Ribosomal protein L19 IUD21_00415 PF00557 Metallopeptidase family M24 IUD21_00420 PF00132 Bacterial transferase hexapeptide (six repeats) IUD21_00420 PF14602 Hexapeptide repeat of succinyl-transferase IUD21_00420 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IUD21_00425 PF03960 ArsC family IUD21_00430 PF01546 Peptidase family M20/M25/M40 IUD21_00430 PF07687 Peptidase dimerisation domain IUD21_00435 PF00733 Asparagine synthase IUD21_00435 PF13537 Glutamine amidotransferase domain IUD21_00445 PF03060 Nitronate monooxygenase IUD21_00450 PF00717 Peptidase S24-like IUD21_00450 PF01726 LexA DNA binding domain IUD21_00455 PF00154 recA bacterial DNA recombination protein IUD21_00460 PF01411 tRNA synthetases class II (A) IUD21_00460 PF02272 DHHA1 domain IUD21_00460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IUD21_00465 PF02599 Global regulator protein family IUD21_00475 PF01432 Peptidase family M3 IUD21_00490 PF00394 Multicopper oxidase IUD21_00490 PF07732 Multicopper oxidase IUD21_00490 PF07731 Multicopper oxidase IUD21_00495 PF05275 Copper resistance protein B precursor (CopB) IUD21_00500 PF10458 Valyl tRNA synthetase tRNA binding arm IUD21_00500 PF00133 tRNA synthetases class I (I, L, M and V) IUD21_00500 PF08264 Anticodon-binding domain of tRNA IUD21_00515 PF00883 Cytosol aminopeptidase family, catalytic domain IUD21_00515 PF02789 Cytosol aminopeptidase family, N-terminal domain IUD21_00520 PF03739 Lipopolysaccharide export system permease LptF/LptG IUD21_00535 PF01380 SIS domain IUD21_00545 PF17284 Spermidine synthase tetramerisation domain IUD21_00550 PF17810 Arginine decarboxylase helical bundle domain IUD21_00550 PF17944 Arginine decarboxylase C-terminal helical extension IUD21_00550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IUD21_00555 PF00106 short chain dehydrogenase IUD21_00565 PF00750 tRNA synthetases class I (R) IUD21_00565 PF05746 DALR anticodon binding domain IUD21_00565 PF03485 Arginyl tRNA synthetase N terminal domain IUD21_00570 PF04002 RadC-like JAB domain IUD21_00575 PF04127 DNA / pantothenate metabolism flavoprotein IUD21_00575 PF02441 Flavoprotein IUD21_00580 PF00692 dUTPase IUD21_00595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IUD21_00595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IUD21_00595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IUD21_00595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IUD21_00605 PF00156 Phosphoribosyl transferase domain IUD21_00645 PF07690 Major Facilitator Superfamily IUD21_00650 PF03702 Anhydro-N-acetylmuramic acid kinase IUD21_00655 PF01551 Peptidase family M23 IUD21_00655 PF04225 Opacity-associated protein A LysM-like domain IUD21_00660 PF00579 tRNA synthetases class I (W and Y) IUD21_00690 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IUD21_00690 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IUD21_00695 PF01578 Cytochrome C assembly protein IUD21_00710 PF16658 Class II release factor RF3, C-terminal domain IUD21_00710 PF00009 Elongation factor Tu GTP binding domain IUD21_00715 PF03006 Haemolysin-III related IUD21_00720 PF00535 Glycosyl transferase family 2 IUD21_00725 PF01026 TatD related DNase IUD21_00740 PF01597 Glycine cleavage H-protein IUD21_00745 PF01571 Aminomethyltransferase folate-binding domain IUD21_00745 PF08669 Glycine cleavage T-protein C-terminal barrel domain IUD21_00755 PF01145 SPFH domain / Band 7 family IUD21_00755 PF16200 C-terminal region of band_7 IUD21_00760 PF03819 MazG nucleotide pyrophosphohydrolase domain IUD21_00765 PF00459 Inositol monophosphatase family IUD21_00770 PF00293 NUDIX domain IUD21_00775 PF00202 Aminotransferase class-III IUD21_00780 PF04452 RNA methyltransferase IUD21_00785 PF00270 DEAD/DEAH box helicase IUD21_00785 PF00271 Helicase conserved C-terminal domain IUD21_00790 PF01242 6-pyruvoyl tetrahydropterin synthase IUD21_00815 PF03653 Uncharacterised protein family (UPF0093) IUD21_00820 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IUD21_00825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IUD21_00825 PF07733 Bacterial DNA polymerase III alpha NTPase domain IUD21_00825 PF02811 PHP domain IUD21_00825 PF14579 Helix-hairpin-helix motif IUD21_00825 PF01336 OB-fold nucleic acid binding domain IUD21_00830 PF01259 SAICAR synthetase IUD21_00835 PF01556 DnaJ C terminal domain IUD21_00835 PF00226 DnaJ domain IUD21_00835 PF00684 DnaJ central domain IUD21_00840 PF00834 Ribulose-phosphate 3 epimerase family IUD21_00845 PF04715 Anthranilate synthase component I, N terminal region IUD21_00845 PF00425 chorismate binding enzyme IUD21_00850 PF00117 Glutamine amidotransferase class-I IUD21_00855 PF02885 Glycosyl transferase family, helical bundle domain IUD21_00855 PF00591 Glycosyl transferase family, a/b domain IUD21_00860 PF00218 Indole-3-glycerol phosphate synthase IUD21_00880 PF00557 Metallopeptidase family M24 IUD21_00880 PF01321 Creatinase/Prolidase N-terminal domain IUD21_00895 PF01702 Queuine tRNA-ribosyltransferase IUD21_00900 PF02699 Preprotein translocase subunit IUD21_00905 PF07549 SecD/SecF GG Motif IUD21_00905 PF13721 SecD export protein N-terminal TM region IUD21_00905 PF02355 Protein export membrane protein IUD21_00910 PF07549 SecD/SecF GG Motif IUD21_00910 PF02355 Protein export membrane protein IUD21_00920 PF12627 Probable RNA and SrmB- binding site of polymerase A IUD21_00920 PF01743 Poly A polymerase head domain IUD21_00920 PF12626 Polymerase A arginine-rich C-terminus IUD21_00925 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IUD21_00930 PF02548 Ketopantoate hydroxymethyltransferase IUD21_00935 PF02569 Pantoate-beta-alanine ligase IUD21_00940 PF02261 Aspartate decarboxylase IUD21_00945 PF00342 Phosphoglucose isomerase IUD21_00955 PF17384 RimP C-terminal SH3 domain IUD21_00955 PF02576 RimP N-terminal domain IUD21_00960 PF13184 NusA-like KH domain IUD21_00960 PF08529 NusA N-terminal domain IUD21_00960 PF00575 S1 RNA binding domain IUD21_00965 PF08364 Bacterial translation initiation factor IF-2 associated region IUD21_00965 PF00009 Elongation factor Tu GTP binding domain IUD21_00965 PF11987 Translation-initiation factor 2 IUD21_00965 PF04760 Translation initiation factor IF-2, N-terminal region IUD21_00970 PF02033 Ribosome-binding factor A IUD21_00975 PF16198 tRNA pseudouridylate synthase B C-terminal domain IUD21_00975 PF09157 Pseudouridine synthase II TruB, C-terminal IUD21_00975 PF01509 TruB family pseudouridylate synthase (N terminal domain) IUD21_00980 PF00312 Ribosomal protein S15 IUD21_00985 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IUD21_00985 PF00013 KH domain IUD21_00985 PF03725 3' exoribonuclease family, domain 2 IUD21_00985 PF00575 S1 RNA binding domain IUD21_00985 PF01138 3' exoribonuclease family, domain 1 IUD21_00990 PF01638 HxlR-like helix-turn-helix IUD21_00995 PF05368 NmrA-like family IUD21_01005 PF00873 AcrB/AcrD/AcrF family IUD21_01025 PF00271 Helicase conserved C-terminal domain IUD21_01025 PF00270 DEAD/DEAH box helicase IUD21_01025 PF03880 DbpA RNA binding domain IUD21_01035 PF01012 Electron transfer flavoprotein domain IUD21_01035 PF00766 Electron transfer flavoprotein FAD-binding domain IUD21_01040 PF01012 Electron transfer flavoprotein domain IUD21_01045 PF16363 GDP-mannose 4,6 dehydratase IUD21_01050 PF00483 Nucleotidyl transferase IUD21_01055 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IUD21_01060 PF04321 RmlD substrate binding domain IUD21_01065 PF00483 Nucleotidyl transferase IUD21_01065 PF01050 Mannose-6-phosphate isomerase IUD21_01070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IUD21_01070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IUD21_01070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IUD21_01070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IUD21_01090 PF12951 Passenger-associated-transport-repeat IUD21_01090 PF00082 Subtilase family IUD21_01090 PF03797 Autotransporter beta-domain IUD21_01095 PF06779 Uncharacterised MFS-type transporter YbfB IUD21_01105 PF00365 Phosphofructokinase IUD21_01115 PF01225 Mur ligase family, catalytic domain IUD21_01115 PF02875 Mur ligase family, glutamate ligase domain IUD21_01115 PF08245 Mur ligase middle domain IUD21_01120 PF01569 PAP2 superfamily IUD21_01135 PF00883 Cytosol aminopeptidase family, catalytic domain IUD21_01135 PF02789 Cytosol aminopeptidase family, N-terminal domain IUD21_01140 PF01594 AI-2E family transporter IUD21_01160 PF00595 PDZ domain IUD21_01165 PF01370 NAD dependent epimerase/dehydratase family IUD21_01165 PF08338 Domain of unknown function (DUF1731) IUD21_01170 PF00501 AMP-binding enzyme IUD21_01170 PF13193 AMP-binding enzyme C-terminal domain IUD21_01175 PF00694 Aconitase C-terminal domain IUD21_01175 PF00330 Aconitase family (aconitate hydratase) IUD21_01190 PF00330 Aconitase family (aconitate hydratase) IUD21_01190 PF11791 Aconitate B N-terminal domain IUD21_01190 PF06434 Aconitate hydratase 2 N-terminus IUD21_01235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUD21_01245 PF00121 Triosephosphate isomerase IUD21_01260 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IUD21_01265 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IUD21_01270 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IUD21_01275 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IUD21_01285 PF10531 SLBB domain IUD21_01285 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IUD21_01285 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IUD21_01290 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal IUD21_01290 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IUD21_01290 PF00384 Molybdopterin oxidoreductase IUD21_01295 PF00146 NADH dehydrogenase IUD21_01300 PF12838 4Fe-4S dicluster domain IUD21_01305 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IUD21_01310 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IUD21_01315 PF00361 Proton-conducting membrane transporter IUD21_01315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IUD21_01320 PF00361 Proton-conducting membrane transporter IUD21_01320 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus IUD21_01325 PF00361 Proton-conducting membrane transporter IUD21_01330 PF00106 short chain dehydrogenase IUD21_01335 PF03600 Citrate transporter IUD21_01345 PF00486 Transcriptional regulatory protein, C terminal IUD21_01345 PF00072 Response regulator receiver domain IUD21_01350 PF00512 His Kinase A (phospho-acceptor) domain IUD21_01350 PF08521 Two-component sensor kinase N-terminal IUD21_01350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_01360 PF00072 Response regulator receiver domain IUD21_01360 PF00196 Bacterial regulatory proteins, luxR family IUD21_01365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_01365 PF00512 His Kinase A (phospho-acceptor) domain IUD21_01365 PF00072 Response regulator receiver domain IUD21_01365 PF09456 RcsC Alpha-Beta-Loop (ABL) IUD21_01380 PF00375 Sodium:dicarboxylate symporter family IUD21_01385 PF01515 Phosphate acetyl/butaryl transferase IUD21_01385 PF03949 Malic enzyme, NAD binding domain IUD21_01385 PF00390 Malic enzyme, N-terminal domain IUD21_01390 PF00183 Hsp90 protein IUD21_01390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_01400 PF01467 Cytidylyltransferase-like IUD21_01415 PF00037 4Fe-4S binding domain IUD21_01425 PF00990 Diguanylate cyclase, GGDEF domain IUD21_01430 PF08460 Bacterial SH3 domain IUD21_01430 PF01551 Peptidase family M23 IUD21_01435 PF01979 Amidohydrolase family IUD21_01440 PF01809 Putative membrane protein insertion efficiency factor IUD21_01445 PF01258 Prokaryotic dksA/traR C4-type zinc finger IUD21_01455 PF05977 Transmembrane secretion effector IUD21_01460 PF02657 Fe-S metabolism associated domain IUD21_01465 PF09190 DALR domain IUD21_01465 PF01406 tRNA synthetases class I (C) catalytic domain IUD21_01480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IUD21_01480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IUD21_01485 PF00764 Arginosuccinate synthase IUD21_01490 PF07687 Peptidase dimerisation domain IUD21_01490 PF01546 Peptidase family M20/M25/M40 IUD21_01495 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase IUD21_01495 PF00696 Amino acid kinase family IUD21_01500 PF01118 Semialdehyde dehydrogenase, NAD binding domain IUD21_01505 PF00206 Lyase IUD21_01510 PF00696 Amino acid kinase family IUD21_01510 PF01472 PUA domain IUD21_01515 PF00171 Aldehyde dehydrogenase family IUD21_01560 PF14437 MafB19-like deaminase IUD21_01565 PF02742 Iron dependent repressor, metal binding and dimerisation domain IUD21_01565 PF01325 Iron dependent repressor, N-terminal DNA binding domain IUD21_01570 PF01566 Natural resistance-associated macrophage protein IUD21_01575 PF04376 Arginine-tRNA-protein transferase, N terminus IUD21_01575 PF04377 Arginine-tRNA-protein transferase, C terminus IUD21_01595 PF00082 Subtilase family IUD21_01595 PF12951 Passenger-associated-transport-repeat IUD21_01595 PF03797 Autotransporter beta-domain IUD21_01610 PF01553 Acyltransferase IUD21_01625 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IUD21_01625 PF05221 S-adenosyl-L-homocysteine hydrolase IUD21_01635 PF01351 Ribonuclease HII IUD21_01640 PF02684 Lipid-A-disaccharide synthetase IUD21_01645 PF00132 Bacterial transferase hexapeptide (six repeats) IUD21_01645 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IUD21_01650 PF07977 FabA-like domain IUD21_01655 PF00132 Bacterial transferase hexapeptide (six repeats) IUD21_01655 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IUD21_01660 PF07244 Surface antigen variable number repeat IUD21_01660 PF01103 Surface antigen IUD21_01665 PF17820 PDZ domain IUD21_01665 PF02163 Peptidase family M50 IUD21_01670 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IUD21_01670 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IUD21_01670 PF13288 DXP reductoisomerase C-terminal domain IUD21_01680 PF01255 Putative undecaprenyl diphosphate synthase IUD21_01685 PF01765 Ribosome recycling factor IUD21_01690 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IUD21_01710 PF00696 Amino acid kinase family IUD21_01740 PF01081 KDPG and KHG aldolase IUD21_01745 PF00920 Dehydratase family IUD21_01750 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IUD21_01755 PF02685 Glucokinase IUD21_01760 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IUD21_01760 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IUD21_01765 PF17912 MalK OB fold domain IUD21_01765 PF00005 ABC transporter IUD21_01770 PF01571 Aminomethyltransferase folate-binding domain IUD21_01780 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IUD21_01785 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IUD21_01790 PF00890 FAD binding domain IUD21_01790 PF02910 Fumarate reductase flavoprotein C-term IUD21_01795 PF13085 2Fe-2S iron-sulfur cluster binding domain IUD21_01800 PF03937 Flavinator of succinate dehydrogenase IUD21_01810 PF02687 FtsX-like permease family IUD21_01810 PF12704 MacB-like periplasmic core domain IUD21_01815 PF00005 ABC transporter IUD21_01820 PF03772 Competence protein IUD21_01820 PF00753 Metallo-beta-lactamase superfamily IUD21_01825 PF01618 MotA/TolQ/ExbB proton channel family IUD21_01835 PF00664 ABC transporter transmembrane region IUD21_01835 PF00005 ABC transporter IUD21_01840 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IUD21_01875 PF01381 Helix-turn-helix IUD21_01880 PF15723 Motility quorum-sensing regulator, toxin of MqsA IUD21_01885 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA IUD21_01950 PF00589 Phage integrase family IUD21_01950 PF02899 Phage integrase, N-terminal SAM-like domain IUD21_01965 PF04264 YceI-like domain IUD21_01970 PF13091 PLD-like domain IUD21_01985 PF03358 NADPH-dependent FMN reductase IUD21_01990 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IUD21_01990 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IUD21_02005 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IUD21_02005 PF00476 DNA polymerase family A IUD21_02005 PF01612 3'-5' exonuclease IUD21_02005 PF01367 5'-3' exonuclease, C-terminal SAM fold IUD21_02015 PF01113 Dihydrodipicolinate reductase, N-terminus IUD21_02015 PF05173 Dihydrodipicolinate reductase, C-terminus IUD21_02020 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IUD21_02020 PF00117 Glutamine amidotransferase class-I IUD21_02025 PF02142 MGS-like domain IUD21_02025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IUD21_02025 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IUD21_02030 PF01272 Transcription elongation factor, GreA/GreB, C-term IUD21_02030 PF03449 Transcription elongation factor, N-terminal IUD21_02040 PF17768 RecJ OB domain IUD21_02040 PF01368 DHH family IUD21_02040 PF02272 DHHA1 domain IUD21_02050 PF01336 OB-fold nucleic acid binding domain IUD21_02050 PF00152 tRNA synthetases class II (D, K and N) IUD21_02055 PF00072 Response regulator receiver domain IUD21_02060 PF00072 Response regulator receiver domain IUD21_02060 PF01627 Hpt domain IUD21_02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_02060 PF00512 His Kinase A (phospho-acceptor) domain IUD21_02065 PF00378 Enoyl-CoA hydratase/isomerase IUD21_02070 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IUD21_02070 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IUD21_02080 PF08245 Mur ligase middle domain IUD21_02090 PF00293 NUDIX domain IUD21_02095 PF02219 Methylenetetrahydrofolate reductase IUD21_02105 PF02545 Maf-like protein IUD21_02110 PF00575 S1 RNA binding domain IUD21_02110 PF10150 Ribonuclease E/G family IUD21_02120 PF01523 Putative modulator of DNA gyrase IUD21_02125 PF04751 Protein of unknown function (DUF615) IUD21_02130 PF01523 Putative modulator of DNA gyrase IUD21_02135 PF03466 LysR substrate binding domain IUD21_02135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUD21_02150 PF00107 Zinc-binding dehydrogenase IUD21_02150 PF08240 Alcohol dehydrogenase GroES-like domain IUD21_02160 PF00132 Bacterial transferase hexapeptide (six repeats) IUD21_02160 PF12804 MobA-like NTP transferase domain IUD21_02160 PF14602 Hexapeptide repeat of succinyl-transferase IUD21_02170 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IUD21_02170 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IUD21_02175 PF02874 ATP synthase alpha/beta family, beta-barrel domain IUD21_02175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IUD21_02180 PF00231 ATP synthase IUD21_02185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IUD21_02185 PF00306 ATP synthase alpha/beta chain, C terminal domain IUD21_02185 PF02874 ATP synthase alpha/beta family, beta-barrel domain IUD21_02190 PF00213 ATP synthase delta (OSCP) subunit IUD21_02195 PF00430 ATP synthase B/B' CF(0) IUD21_02200 PF00137 ATP synthase subunit C IUD21_02205 PF00119 ATP synthase A chain IUD21_02220 PF00338 Ribosomal protein S10p/S20e IUD21_02225 PF00297 Ribosomal protein L3 IUD21_02230 PF00573 Ribosomal protein L4/L1 family IUD21_02235 PF00276 Ribosomal protein L23 IUD21_02240 PF03947 Ribosomal Proteins L2, C-terminal domain IUD21_02240 PF00181 Ribosomal Proteins L2, RNA binding domain IUD21_02245 PF00203 Ribosomal protein S19 IUD21_02250 PF00237 Ribosomal protein L22p/L17e IUD21_02255 PF00189 Ribosomal protein S3, C-terminal domain IUD21_02255 PF07650 KH domain IUD21_02260 PF00252 Ribosomal protein L16p/L10e IUD21_02265 PF00831 Ribosomal L29 protein IUD21_02270 PF00366 Ribosomal protein S17 IUD21_02275 PF00238 Ribosomal protein L14p/L23e IUD21_02280 PF00467 KOW motif IUD21_02280 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IUD21_02285 PF00673 ribosomal L5P family C-terminus IUD21_02285 PF00281 Ribosomal protein L5 IUD21_02290 PF00253 Ribosomal protein S14p/S29e IUD21_02295 PF00410 Ribosomal protein S8 IUD21_02300 PF00347 Ribosomal protein L6 IUD21_02305 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IUD21_02310 PF00333 Ribosomal protein S5, N-terminal domain IUD21_02310 PF03719 Ribosomal protein S5, C-terminal domain IUD21_02315 PF00327 Ribosomal protein L30p/L7e IUD21_02320 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IUD21_02325 PF00344 SecY translocase IUD21_02330 PF00416 Ribosomal protein S13/S18 IUD21_02335 PF00411 Ribosomal protein S11 IUD21_02340 PF00163 Ribosomal protein S4/S9 N-terminal domain IUD21_02340 PF01479 S4 domain IUD21_02345 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IUD21_02345 PF01000 RNA polymerase Rpb3/RpoA insert domain IUD21_02345 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IUD21_02350 PF01196 Ribosomal protein L17 IUD21_02355 PF04380 Membrane fusogenic activity IUD21_02360 PF13335 Magnesium chelatase, subunit ChlI C-terminal IUD21_02360 PF01078 Magnesium chelatase, subunit ChlI IUD21_02370 PF00561 alpha/beta hydrolase fold IUD21_02375 PF03280 Proteobacterial lipase chaperone protein IUD21_02385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IUD21_02385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IUD21_02385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IUD21_02400 PF05697 Bacterial trigger factor protein (TF) IUD21_02400 PF05698 Bacterial trigger factor protein (TF) C-terminus IUD21_02405 PF00574 Clp protease IUD21_02410 PF07724 AAA domain (Cdc48 subfamily) IUD21_02410 PF06689 ClpX C4-type zinc finger IUD21_02410 PF10431 C-terminal, D2-small domain, of ClpB protein IUD21_02415 PF02190 ATP-dependent protease La (LON) substrate-binding domain IUD21_02415 PF05362 Lon protease (S16) C-terminal proteolytic domain IUD21_02415 PF00004 ATPase family associated with various cellular activities (AAA) IUD21_02420 PF00216 Bacterial DNA-binding protein IUD21_02445 PF03477 ATP cone domain IUD21_02445 PF02867 Ribonucleotide reductase, barrel domain IUD21_02445 PF00317 Ribonucleotide reductase, all-alpha domain IUD21_02450 PF00268 Ribonucleotide reductase, small chain IUD21_02465 PF01479 S4 domain IUD21_02465 PF00849 RNA pseudouridylate synthase IUD21_02470 PF13419 Haloacid dehalogenase-like hydrolase IUD21_02480 PF00830 Ribosomal L28 family IUD21_02485 PF00471 Ribosomal protein L33 IUD21_02490 PF13396 Phospholipase_D-nuclease N-terminal IUD21_02490 PF13091 PLD-like domain IUD21_02495 PF00043 Glutathione S-transferase, C-terminal domain IUD21_02495 PF02798 Glutathione S-transferase, N-terminal domain IUD21_02500 PF00056 lactate/malate dehydrogenase, NAD binding domain IUD21_02500 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IUD21_02505 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IUD21_02510 PF00679 Elongation factor G C-terminus IUD21_02510 PF03144 Elongation factor Tu domain 2 IUD21_02510 PF00009 Elongation factor Tu GTP binding domain IUD21_02520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUD21_02520 PF00529 HlyD membrane-fusion protein of T1SS IUD21_02545 PF00664 ABC transporter transmembrane region IUD21_02545 PF00005 ABC transporter IUD21_02545 PF03412 Peptidase C39 family IUD21_02550 PF01061 ABC-2 type transporter IUD21_02555 PF00005 ABC transporter IUD21_02560 PF05567 Neisseria PilC beta-propeller domain IUD21_02575 PF00270 DEAD/DEAH box helicase IUD21_02575 PF04408 Helicase associated domain (HA2) IUD21_02575 PF00271 Helicase conserved C-terminal domain IUD21_02575 PF08482 ATP-dependent helicase C-terminal IUD21_02585 PF13185 GAF domain IUD21_02590 PF17243 POTRA domain TamA domain 1 IUD21_02590 PF01103 Surface antigen IUD21_02595 PF04357 TamB, inner membrane protein subunit of TAM complex IUD21_02605 PF00589 Phage integrase family IUD21_02720 PF04303 PrpF protein IUD21_02745 PF07703 Alpha-2-macroglobulin bait region domain IUD21_02745 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain IUD21_02745 PF11974 Bacterial alpha-2-macroglobulin MG3 domain IUD21_02745 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain IUD21_02745 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain IUD21_02745 PF17962 Bacterial macroglobulin domain 6 IUD21_02745 PF00207 Alpha-2-macroglobulin family IUD21_02745 PF01835 MG2 domain IUD21_02750 PF07859 alpha/beta hydrolase fold IUD21_02755 PF12833 Helix-turn-helix domain IUD21_02755 PF12852 Cupin IUD21_02765 PF00929 Exonuclease IUD21_02770 PF05552 Conserved TM helix IUD21_02770 PF00924 Mechanosensitive ion channel IUD21_02775 PF02896 PEP-utilising enzyme, TIM barrel domain IUD21_02775 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IUD21_02775 PF00391 PEP-utilising enzyme, mobile domain IUD21_02780 PF03618 Kinase/pyrophosphorylase IUD21_02800 PF00553 Cellulose binding domain IUD21_02800 PF00041 Fibronectin type III domain IUD21_02800 PF01341 Glycosyl hydrolases family 6 IUD21_02805 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IUD21_02805 PF04055 Radical SAM superfamily IUD21_02810 PF03099 Biotin/lipoate A/B protein ligase family IUD21_02815 PF04359 Protein of unknown function (DUF493) IUD21_02835 PF04286 Protein of unknown function (DUF445) IUD21_02840 PF00571 CBS domain IUD21_02840 PF03471 Transporter associated domain IUD21_02840 PF01595 Cyclin M transmembrane N-terminal domain IUD21_02855 PF00204 DNA gyrase B IUD21_02855 PF00986 DNA gyrase B subunit, carboxyl terminus IUD21_02855 PF01751 Toprim domain IUD21_02855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_02865 PF00117 Glutamine amidotransferase class-I IUD21_02865 PF06418 CTP synthase N-terminus IUD21_02870 PF00793 DAHP synthetase I family IUD21_02875 PF00113 Enolase, C-terminal TIM barrel domain IUD21_02875 PF03952 Enolase, N-terminal domain IUD21_02880 PF04977 Septum formation initiator IUD21_02885 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IUD21_02890 PF02542 YgbB family IUD21_02895 PF01713 Smr domain IUD21_02920 PF02470 MlaD protein IUD21_02920 PF03886 ABC-type transport auxiliary lipoprotein component IUD21_02925 PF00005 ABC transporter IUD21_02930 PF02405 Permease MlaE IUD21_02970 PF04085 rod shape-determining protein MreC IUD21_02975 PF04093 rod shape-determining protein MreD IUD21_02980 PF00905 Penicillin binding protein transpeptidase domain IUD21_02980 PF03717 Penicillin-binding Protein dimerisation domain IUD21_02985 PF01098 Cell cycle protein IUD21_02990 PF02547 Queuosine biosynthesis protein IUD21_02995 PF04607 Region found in RelA / SpoT proteins IUD21_02995 PF13291 ACT domain IUD21_02995 PF02824 TGS domain IUD21_03010 PF03776 Septum formation topological specificity factor MinE IUD21_03015 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IUD21_03020 PF05209 Septum formation inhibitor MinC, N-terminal domain IUD21_03020 PF03775 Septum formation inhibitor MinC, C-terminal domain IUD21_03035 PF00730 HhH-GPD superfamily base excision DNA repair protein IUD21_03050 PF04264 YceI-like domain IUD21_03055 PF17149 Periplasmic sensor domain found in signal transduction proteins IUD21_03055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_03055 PF00072 Response regulator receiver domain IUD21_03055 PF00512 His Kinase A (phospho-acceptor) domain IUD21_03055 PF01627 Hpt domain IUD21_03055 PF00672 HAMP domain IUD21_03060 PF00145 C-5 cytosine-specific DNA methylase IUD21_03075 PF01208 Uroporphyrinogen decarboxylase (URO-D) IUD21_03080 PF01761 3-dehydroquinate synthase IUD21_03085 PF01202 Shikimate kinase IUD21_03090 PF01243 Pyridoxamine 5'-phosphate oxidase IUD21_03090 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IUD21_03095 PF00749 tRNA synthetases class I (E and Q), catalytic domain IUD21_03095 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IUD21_03105 PF03932 CutC family IUD21_03120 PF00528 Binding-protein-dependent transport system inner membrane component IUD21_03125 PF00528 Binding-protein-dependent transport system inner membrane component IUD21_03130 PF00005 ABC transporter IUD21_03130 PF12857 TOBE-like domain IUD21_03140 PF03979 Sigma-70 factor, region 1.1 IUD21_03140 PF04539 Sigma-70 region 3 IUD21_03140 PF04542 Sigma-70 region 2 IUD21_03140 PF04546 Sigma-70, non-essential region IUD21_03140 PF00140 Sigma-70 factor, region 1.2 IUD21_03140 PF04545 Sigma-70, region 4 IUD21_03145 PF00521 DNA gyrase/topoisomerase IV, subunit A IUD21_03145 PF03989 DNA gyrase C-terminal domain, beta-propeller IUD21_03150 PF01047 MarR family IUD21_03160 PF12697 Alpha/beta hydrolase family IUD21_03165 PF00155 Aminotransferase class I and II IUD21_03175 PF01040 UbiA prenyltransferase family IUD21_03185 PF12627 Probable RNA and SrmB- binding site of polymerase A IUD21_03185 PF01743 Poly A polymerase head domain IUD21_03185 PF01966 HD domain IUD21_03190 PF14718 Soluble lytic murein transglycosylase L domain IUD21_03190 PF01464 Transglycosylase SLT domain IUD21_03195 PF02666 Phosphatidylserine decarboxylase IUD21_03200 PF02630 SCO1/SenC IUD21_03210 PF05175 Methyltransferase small domain IUD21_03215 PF01264 Chorismate synthase IUD21_03225 PF02774 Semialdehyde dehydrogenase, dimerisation domain IUD21_03225 PF01118 Semialdehyde dehydrogenase, NAD binding domain IUD21_03235 PF01416 tRNA pseudouridine synthase IUD21_03240 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IUD21_03245 PF00291 Pyridoxal-phosphate dependent enzyme IUD21_03250 PF00290 Tryptophan synthase alpha chain IUD21_03255 PF18073 Rubredoxin metal binding domain IUD21_03260 PF00296 Luciferase-like monooxygenase IUD21_03270 PF00271 Helicase conserved C-terminal domain IUD21_03270 PF00570 HRDC domain IUD21_03270 PF00270 DEAD/DEAH box helicase IUD21_03270 PF09382 RQC domain IUD21_03270 PF16124 RecQ zinc-binding IUD21_03275 PF00210 Ferritin-like domain IUD21_03280 PF00270 DEAD/DEAH box helicase IUD21_03280 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IUD21_03280 PF11898 Domain of unknown function (DUF3418) IUD21_03280 PF04408 Helicase associated domain (HA2) IUD21_03280 PF00271 Helicase conserved C-terminal domain IUD21_03285 PF02347 Glycine cleavage system P-protein IUD21_03290 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IUD21_03295 PF00510 Cytochrome c oxidase subunit III IUD21_03300 PF00115 Cytochrome C and Quinol oxidase polypeptide I IUD21_03305 PF06481 COX Aromatic Rich Motif IUD21_03305 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IUD21_03310 PF00348 Polyprenyl synthetase IUD21_03315 PF00436 Single-strand binding protein family IUD21_03335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IUD21_03345 PF05524 PEP-utilising enzyme, N-terminal IUD21_03345 PF02896 PEP-utilising enzyme, TIM barrel domain IUD21_03345 PF00391 PEP-utilising enzyme, mobile domain IUD21_03350 PF00381 PTS HPr component phosphorylation site IUD21_03360 PF03668 P-loop ATPase protein family IUD21_03365 PF07475 HPr Serine kinase C-terminal domain IUD21_03365 PF02603 HPr Serine kinase N terminus IUD21_03370 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IUD21_03375 PF00309 Sigma-54 factor, Activator interacting domain (AID) IUD21_03375 PF04963 Sigma-54 factor, core binding domain IUD21_03375 PF04552 Sigma-54, DNA binding domain IUD21_03380 PF12399 Branched-chain amino acid ATP-binding cassette transporter IUD21_03380 PF00005 ABC transporter IUD21_03400 PF00571 CBS domain IUD21_03400 PF01380 SIS domain IUD21_03405 PF01722 BolA-like protein IUD21_03410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IUD21_03440 PF02769 AIR synthase related protein, C-terminal domain IUD21_03440 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IUD21_03440 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IUD21_03445 PF13098 Thioredoxin-like domain IUD21_03445 PF10411 Disulfide bond isomerase protein N-terminus IUD21_03450 PF00589 Phage integrase family IUD21_03450 PF02899 Phage integrase, N-terminal SAM-like domain IUD21_03455 PF00027 Cyclic nucleotide-binding domain IUD21_03455 PF00520 Ion transport protein IUD21_03460 PF00202 Aminotransferase class-III IUD21_03465 PF04107 Glutamate-cysteine ligase family 2(GCS2) IUD21_03470 PF01926 50S ribosome-binding GTPase IUD21_03480 PF01323 DSBA-like thioredoxin domain IUD21_03485 PF01323 DSBA-like thioredoxin domain IUD21_03495 PF04356 Protein of unknown function (DUF489) IUD21_03505 PF00293 NUDIX domain IUD21_03510 PF02617 ATP-dependent Clp protease adaptor protein ClpS IUD21_03515 PF10431 C-terminal, D2-small domain, of ClpB protein IUD21_03515 PF02861 Clp amino terminal domain, pathogenicity island component IUD21_03515 PF17871 AAA lid domain IUD21_03515 PF07724 AAA domain (Cdc48 subfamily) IUD21_03515 PF00004 ATPase family associated with various cellular activities (AAA) IUD21_03520 PF01176 Translation initiation factor 1A / IF-1 IUD21_03525 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IUD21_03535 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUD21_03540 PF09397 Ftsk gamma domain IUD21_03540 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IUD21_03540 PF17854 FtsK alpha domain IUD21_03540 PF01580 FtsK/SpoIIIE family IUD21_03550 PF03548 Outer membrane lipoprotein carrier protein LolA IUD21_03555 PF00004 ATPase family associated with various cellular activities (AAA) IUD21_03555 PF16193 AAA C-terminal domain IUD21_03555 PF12002 MgsA AAA+ ATPase C terminal IUD21_03560 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IUD21_03565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_03565 PF00512 His Kinase A (phospho-acceptor) domain IUD21_03570 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IUD21_03590 PF02685 Glucokinase IUD21_03600 PF07690 Major Facilitator Superfamily IUD21_03605 PF00356 Bacterial regulatory proteins, lacI family IUD21_03610 PF01380 SIS domain IUD21_03615 PF01979 Amidohydrolase family IUD21_03620 PF01039 Carboxyl transferase domain IUD21_03620 PF17848 Acetyl-coA carboxylase zinc finger domain IUD21_03625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IUD21_03625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IUD21_03625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IUD21_03625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IUD21_03630 PF01522 Polysaccharide deacetylase IUD21_03635 PF00534 Glycosyl transferases group 1 IUD21_03635 PF13439 Glycosyltransferase Family 4 IUD21_03645 PF00355 Rieske [2Fe-2S] domain IUD21_03650 PF00266 Aminotransferase class-V IUD21_03655 PF01458 Uncharacterized protein family (UPF0051) IUD21_03660 PF00005 ABC transporter IUD21_03665 PF01458 Uncharacterized protein family (UPF0051) IUD21_03670 PF02082 Transcriptional regulator IUD21_03680 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IUD21_03680 PF00326 Prolyl oligopeptidase family IUD21_03690 PF01678 Diaminopimelate epimerase IUD21_03700 PF00589 Phage integrase family IUD21_03700 PF02899 Phage integrase, N-terminal SAM-like domain IUD21_03705 PF00227 Proteasome subunit IUD21_03710 PF10431 C-terminal, D2-small domain, of ClpB protein IUD21_03710 PF00004 ATPase family associated with various cellular activities (AAA) IUD21_03710 PF07724 AAA domain (Cdc48 subfamily) IUD21_03720 PF01209 ubiE/COQ5 methyltransferase family IUD21_03725 PF11838 ERAP1-like C-terminal domain IUD21_03725 PF01433 Peptidase family M1 domain IUD21_03745 PF13369 Transglutaminase-like superfamily IUD21_03765 PF01507 Phosphoadenosine phosphosulfate reductase family IUD21_03770 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IUD21_03770 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IUD21_03775 PF00258 Flavodoxin IUD21_03775 PF00175 Oxidoreductase NAD-binding domain IUD21_03775 PF00667 FAD binding domain IUD21_03780 PF01507 Phosphoadenosine phosphosulfate reductase family IUD21_03785 PF00009 Elongation factor Tu GTP binding domain IUD21_03790 PF01192 RNA polymerase Rpb6 IUD21_03795 PF00625 Guanylate kinase IUD21_03800 PF03755 YicC-like family, N-terminal region IUD21_03800 PF08340 Domain of unknown function (DUF1732) IUD21_03805 PF03725 3' exoribonuclease family, domain 2 IUD21_03805 PF01138 3' exoribonuclease family, domain 1 IUD21_03810 PF01725 Ham1 family IUD21_03815 PF04055 Radical SAM superfamily IUD21_03815 PF06969 HemN C-terminal domain IUD21_03830 PF00561 alpha/beta hydrolase fold IUD21_03835 PF05175 Methyltransferase small domain IUD21_03835 PF17827 PrmC N-terminal domain IUD21_03850 PF05662 Coiled stalk of trimeric autotransporter adhesin IUD21_03850 PF05658 Head domain of trimeric autotransporter adhesin IUD21_03850 PF03895 YadA-like membrane anchor domain IUD21_03850 PF13018 Extended Signal Peptide of Type V secretion system IUD21_03855 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IUD21_03855 PF00437 Type II/IV secretion system protein IUD21_03860 PF00482 Type II secretion system (T2SS), protein F IUD21_03870 PF08334 Type II secretion system (T2SS), protein G IUD21_03875 PF12019 Type II transport protein GspH IUD21_03880 PF07963 Prokaryotic N-terminal methylation motif IUD21_03890 PF03934 Type II secretion system (T2SS), protein K IUD21_03895 PF05137 Fimbrial assembly protein (PilN) IUD21_03900 PF10741 Type II secretion system (T2SS), protein M subtype b IUD21_03910 PF03958 Bacterial type II/III secretion system short domain IUD21_03910 PF00263 Bacterial type II and III secretion system protein IUD21_03915 PF05658 Head domain of trimeric autotransporter adhesin IUD21_03915 PF03895 YadA-like membrane anchor domain IUD21_03915 PF13018 Extended Signal Peptide of Type V secretion system IUD21_03915 PF05662 Coiled stalk of trimeric autotransporter adhesin IUD21_03920 PF00578 AhpC/TSA family IUD21_03920 PF10417 C-terminal domain of 1-Cys peroxiredoxin IUD21_03925 PF13192 Thioredoxin domain IUD21_03925 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUD21_03930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUD21_03930 PF03466 LysR substrate binding domain IUD21_03935 PF00814 Glycoprotease family IUD21_03940 PF01197 Ribosomal protein L31 IUD21_03945 PF00285 Citrate synthase, C-terminal domain IUD21_03950 PF00380 Ribosomal protein S9/S16 IUD21_03955 PF00572 Ribosomal protein L13 IUD21_03960 PF03232 Ubiquinone biosynthesis protein COQ7 IUD21_03965 PF02675 S-adenosylmethionine decarboxylase IUD21_03970 PF00325 Bacterial regulatory proteins, crp family IUD21_03970 PF00027 Cyclic nucleotide-binding domain IUD21_03990 PF00899 ThiF family IUD21_04000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IUD21_04000 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUD21_04010 PF02817 e3 binding domain IUD21_04010 PF00364 Biotin-requiring enzyme IUD21_04010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IUD21_04015 PF00676 Dehydrogenase E1 component IUD21_04015 PF16870 2-oxoglutarate dehydrogenase C-terminal IUD21_04015 PF02779 Transketolase, pyrimidine binding domain IUD21_04015 PF16078 2-oxoglutarate dehydrogenase N-terminus IUD21_04020 PF08007 Cupin superfamily protein IUD21_04025 PF00206 Lyase IUD21_04025 PF08328 Adenylosuccinate lyase C-terminal IUD21_04030 PF10415 Fumarase C C-terminus IUD21_04030 PF00206 Lyase IUD21_04035 PF00589 Phage integrase family IUD21_04035 PF02899 Phage integrase, N-terminal SAM-like domain IUD21_04090 PF13932 GidA associated domain IUD21_04090 PF01134 Glucose inhibited division protein A IUD21_04095 PF13932 GidA associated domain IUD21_04095 PF01134 Glucose inhibited division protein A IUD21_04115 PF13649 Methyltransferase domain IUD21_04125 PF02649 Type I GTP cyclohydrolase folE2 IUD21_04130 PF00132 Bacterial transferase hexapeptide (six repeats) IUD21_04135 PF00873 AcrB/AcrD/AcrF family IUD21_04140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUD21_04140 PF00529 HlyD membrane-fusion protein of T1SS IUD21_04145 PF05088 Bacterial NAD-glutamate dehydrogenase IUD21_04150 PF01513 ATP-NAD kinase IUD21_04170 PF18818 Metallopeptidase superfamily domain IUD21_04170 PF08401 Domain of unknown function (DUF1738) IUD21_04170 PF13362 Toprim domain IUD21_04175 PF12706 Beta-lactamase superfamily domain IUD21_04185 PF00929 Exonuclease IUD21_04185 PF08411 Exonuclease C-terminal IUD21_04195 PF00999 Sodium/hydrogen exchanger family IUD21_04205 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IUD21_04215 PF01812 5-formyltetrahydrofolate cyclo-ligase family IUD21_04225 PF05164 Cell division protein ZapA IUD21_04235 PF03695 Uncharacterised protein family (UPF0149) IUD21_04240 PF05195 Aminopeptidase P, N-terminal domain IUD21_04240 PF00557 Metallopeptidase family M24 IUD21_04245 PF00293 NUDIX domain IUD21_04250 PF00881 Nitroreductase family IUD21_04285 PF01063 Amino-transferase class IV IUD21_04290 PF02954 Bacterial regulatory protein, Fis family IUD21_04300 PF01381 Helix-turn-helix IUD21_04310 PF00535 Glycosyl transferase family 2 IUD21_04320 PF00925 GTP cyclohydrolase II IUD21_04325 PF00578 AhpC/TSA family IUD21_04335 PF00773 RNB domain IUD21_04335 PF00575 S1 RNA binding domain IUD21_04335 PF17876 Cold shock domain IUD21_04335 PF08206 Ribonuclease B OB domain IUD21_04335 PF08461 Ribonuclease R winged-helix domain IUD21_04340 PF00588 SpoU rRNA Methylase family IUD21_04340 PF08032 RNA 2'-O ribose methyltransferase substrate binding IUD21_04345 PF00132 Bacterial transferase hexapeptide (six repeats) IUD21_04350 PF01227 GTP cyclohydrolase I IUD21_04355 PF05658 Head domain of trimeric autotransporter adhesin IUD21_04355 PF05662 Coiled stalk of trimeric autotransporter adhesin IUD21_04355 PF03895 YadA-like membrane anchor domain IUD21_04360 PF03186 CobD/Cbib protein IUD21_04365 PF12805 FUSC-like inner membrane protein yccS IUD21_04370 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IUD21_04370 PF02844 Phosphoribosylglycinamide synthetase, N domain IUD21_04370 PF02843 Phosphoribosylglycinamide synthetase, C domain IUD21_04375 PF01808 AICARFT/IMPCHase bienzyme IUD21_04375 PF02142 MGS-like domain IUD21_04385 PF00588 SpoU rRNA Methylase family IUD21_04395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IUD21_04395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IUD21_04400 PF18273 Type III R-M EcoP15I C-terminal domain IUD21_04400 PF01555 DNA methylase IUD21_04410 PF00561 alpha/beta hydrolase fold IUD21_04415 PF03692 Putative zinc- or iron-chelating domain IUD21_04420 PF02540 NAD synthase IUD21_04420 PF00795 Carbon-nitrogen hydrolase IUD21_04425 PF02091 Glycyl-tRNA synthetase alpha subunit IUD21_04430 PF02092 Glycyl-tRNA synthetase beta subunit IUD21_04430 PF05746 DALR anticodon binding domain IUD21_04445 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IUD21_04445 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IUD21_04450 PF00072 Response regulator receiver domain IUD21_04455 PF01584 CheW-like domain IUD21_04460 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IUD21_04460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUD21_04465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_04465 PF01584 CheW-like domain IUD21_04465 PF00072 Response regulator receiver domain IUD21_04465 PF01627 Hpt domain IUD21_04465 PF02895 Signal transducing histidine kinase, homodimeric domain IUD21_04480 PF00156 Phosphoribosyl transferase domain IUD21_04495 PF08245 Mur ligase middle domain IUD21_04495 PF02875 Mur ligase family, glutamate ligase domain IUD21_04505 PF01432 Peptidase family M3 IUD21_04520 PF01625 Peptide methionine sulfoxide reductase IUD21_04525 PF00375 Sodium:dicarboxylate symporter family IUD21_04530 PF02779 Transketolase, pyrimidine binding domain IUD21_04530 PF02780 Transketolase, C-terminal domain IUD21_04530 PF00456 Transketolase, thiamine diphosphate binding domain IUD21_04535 PF02527 rRNA small subunit methyltransferase G IUD21_04540 PF01648 4'-phosphopantetheinyl transferase superfamily IUD21_04560 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IUD21_04560 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IUD21_04565 PF00890 FAD binding domain IUD21_04565 PF02910 Fumarate reductase flavoprotein C-term IUD21_04570 PF02445 Quinolinate synthetase A protein IUD21_04575 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IUD21_04575 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IUD21_04580 PF01371 Trp repressor protein IUD21_04605 PF00591 Glycosyl transferase family, a/b domain IUD21_04605 PF02885 Glycosyl transferase family, helical bundle domain IUD21_04605 PF00117 Glutamine amidotransferase class-I IUD21_04610 PF04715 Anthranilate synthase component I, N terminal region IUD21_04610 PF00425 chorismate binding enzyme IUD21_04615 PF04715 Anthranilate synthase component I, N terminal region IUD21_04615 PF00425 chorismate binding enzyme IUD21_04625 PF01026 TatD related DNase IUD21_04645 PF00448 SRP54-type protein, GTPase domain IUD21_04645 PF02881 SRP54-type protein, helical bundle domain IUD21_04650 PF14815 NUDIX domain IUD21_04650 PF00730 HhH-GPD superfamily base excision DNA repair protein IUD21_04650 PF00633 Helix-hairpin-helix motif IUD21_04655 PF04362 Bacterial Fe(2+) trafficking IUD21_04665 PF01709 Transcriptional regulator IUD21_04670 PF02075 Crossover junction endodeoxyribonuclease RuvC IUD21_04675 PF07499 RuvA, C-terminal domain IUD21_04675 PF01330 RuvA N terminal domain IUD21_04680 PF02705 K+ potassium transporter IUD21_04685 PF17864 RuvB AAA lid domain IUD21_04685 PF05496 Holliday junction DNA helicase RuvB P-loop domain IUD21_04685 PF05491 RuvB C-terminal winged helix domain IUD21_04690 PF03061 Thioesterase superfamily IUD21_04695 PF01618 MotA/TolQ/ExbB proton channel family IUD21_04700 PF02472 Biopolymer transport protein ExbD/TolR IUD21_04710 PF04052 TolB amino-terminal domain IUD21_04710 PF07676 WD40-like Beta Propeller Repeat IUD21_04715 PF00691 OmpA family IUD21_04725 PF04055 Radical SAM superfamily IUD21_04730 PF00300 Histidine phosphatase superfamily (branch 1) IUD21_04735 PF04493 Endonuclease V IUD21_04740 PF00854 POT family IUD21_04745 PF00255 Glutathione peroxidase IUD21_04750 PF00970 Oxidoreductase FAD-binding domain IUD21_04750 PF00175 Oxidoreductase NAD-binding domain IUD21_04755 PF01964 Radical SAM ThiC family IUD21_04755 PF13667 ThiC-associated domain IUD21_04760 PF10459 Peptidase S46 IUD21_04765 PF00300 Histidine phosphatase superfamily (branch 1) IUD21_05100 PF06508 Queuosine biosynthesis protein QueC IUD21_05105 PF01336 OB-fold nucleic acid binding domain IUD21_05105 PF00152 tRNA synthetases class II (D, K and N) IUD21_05105 PF02938 GAD domain IUD21_05110 PF05681 Fumarate hydratase (Fumerase) IUD21_05110 PF05683 Fumarase C-terminus IUD21_05130 PF12951 Passenger-associated-transport-repeat IUD21_05130 PF00082 Subtilase family IUD21_05130 PF03797 Autotransporter beta-domain IUD21_05180 PF05016 ParE toxin of type II toxin-antitoxin system, parDE IUD21_05185 PF09386 Antitoxin ParD IUD21_05235 PF10876 Phage tail assemb.y chaperone protein, TAC IUD21_05290 PF04233 Phage Mu protein F like protein IUD21_05340 PF13356 Arm DNA-binding domain IUD21_05340 PF00589 Phage integrase family IUD21_05345 PF06381 Protein of unknown function (DUF1073) IUD21_05375 PF00959 Phage lysozyme IUD21_05410 PF02498 BRO family, N-terminal domain IUD21_05410 PF10548 P22AR C-terminal domain IUD21_05450 PF17841 BID domain of Bartonella effector protein (Bep) IUD21_05450 PF02661 Fic/DOC family IUD21_05455 PF18495 Antitoxin VbhA IUD21_05495 PF10065 Uncharacterized conserved protein (DUF2303) IUD21_05525 PF00436 Single-strand binding protein family IUD21_05535 PF00589 Phage integrase family IUD21_05535 PF02899 Phage integrase, N-terminal SAM-like domain IUD21_05540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_05540 PF00512 His Kinase A (phospho-acceptor) domain IUD21_05540 PF00989 PAS fold IUD21_05545 PF02954 Bacterial regulatory protein, Fis family IUD21_05545 PF00158 Sigma-54 interaction domain IUD21_05545 PF00072 Response regulator receiver domain IUD21_05560 PF00909 Ammonium Transporter Family IUD21_05565 PF00543 Nitrogen regulatory protein P-II IUD21_05570 PF03951 Glutamine synthetase, beta-Grasp domain IUD21_05570 PF00120 Glutamine synthetase, catalytic domain IUD21_05575 PF02673 Bacitracin resistance protein BacA IUD21_05580 PF04264 YceI-like domain IUD21_05600 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IUD21_05600 PF07055 Enoyl reductase FAD binding domain IUD21_05600 PF12241 Trans-2-enoyl-CoA reductase catalytic region IUD21_05610 PF03109 ABC1 family IUD21_05620 PF00551 Formyl transferase IUD21_05625 PF07683 Cobalamin synthesis protein cobW C-terminal domain IUD21_05625 PF02492 CobW/HypB/UreG, nucleotide-binding domain IUD21_05635 PF03969 AFG1-like ATPase IUD21_05640 PF02566 OsmC-like protein IUD21_05645 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family IUD21_05650 PF00595 PDZ domain IUD21_05650 PF11818 C-terminal domain of tail specific protease (DUF3340) IUD21_05650 PF03572 Peptidase family S41 IUD21_05650 PF17804 Tail specific protease N-terminal domain IUD21_05655 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IUD21_05655 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IUD21_05660 PF00205 Thiamine pyrophosphate enzyme, central domain IUD21_05660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IUD21_05660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IUD21_05670 PF00291 Pyridoxal-phosphate dependent enzyme IUD21_05675 PF08502 LeuA allosteric (dimerisation) domain IUD21_05675 PF00682 HMGL-like IUD21_05680 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IUD21_05680 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IUD21_05685 PF01783 Ribosomal L32p protein family IUD21_05690 PF02620 Large ribosomal RNA subunit accumulation protein YceD IUD21_05700 PF07726 ATPase family associated with various cellular activities (AAA) IUD21_05700 PF17863 AAA lid domain IUD21_05710 PF11992 Domain of unknown function (DUF3488) IUD21_05710 PF13559 Domain of unknown function (DUF4129) IUD21_05710 PF01841 Transglutaminase-like superfamily IUD21_05720 PF01230 HIT domain IUD21_05725 PF02132 RecR protein IUD21_05725 PF13662 Toprim domain IUD21_05730 PF02575 YbaB/EbfC DNA-binding family IUD21_05735 PF12169 DNA polymerase III subunits gamma and tau domain III IUD21_05735 PF12170 DNA polymerase III tau subunit V interacting with alpha IUD21_05765 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IUD21_05765 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IUD21_05770 PF02556 Preprotein translocase subunit SecB IUD21_05775 PF00581 Rhodanese-like domain IUD21_05800 PF02237 Biotin protein ligase C terminal domain IUD21_05800 PF08279 HTH domain IUD21_05800 PF03099 Biotin/lipoate A/B protein ligase family IUD21_05805 PF03309 Type III pantothenate kinase IUD21_05835 PF00114 Pilin (bacterial filament) IUD21_05835 PF07963 Prokaryotic N-terminal methylation motif IUD21_05850 PF01168 Alanine racemase, N-terminal domain IUD21_05855 PF00488 MutS domain V IUD21_05855 PF05190 MutS family domain IV IUD21_05855 PF01624 MutS domain I IUD21_05855 PF05188 MutS domain II IUD21_05855 PF05192 MutS domain III IUD21_05860 PF00912 Transglycosylase IUD21_05865 PF01430 Hsp33 protein IUD21_05880 PF01042 Endoribonuclease L-PSP IUD21_05920 PF17482 Phage tail sheath C-terminal domain IUD21_05920 PF04984 Phage tail sheath protein subtilisin-like domain IUD21_05945 PF04221 RelB antitoxin IUD21_05950 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ IUD21_06020 PF00959 Phage lysozyme IUD21_06085 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT IUD21_06160 PF10548 P22AR C-terminal domain IUD21_06160 PF02498 BRO family, N-terminal domain IUD21_06195 PF02899 Phage integrase, N-terminal SAM-like domain IUD21_06195 PF00589 Phage integrase family IUD21_06200 PF03706 Lysylphosphatidylglycerol synthase TM region IUD21_06200 PF09924 Uncharacterised conserved protein (DUF2156) IUD21_06210 PF00109 Beta-ketoacyl synthase, N-terminal domain IUD21_06210 PF02801 Beta-ketoacyl synthase, C-terminal domain IUD21_06220 PF00535 Glycosyl transferase family 2 IUD21_06235 PF00437 Type II/IV secretion system protein IUD21_06240 PF00437 Type II/IV secretion system protein IUD21_06255 PF03900 Porphobilinogen deaminase, C-terminal domain IUD21_06255 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IUD21_06260 PF00072 Response regulator receiver domain IUD21_06260 PF04397 LytTr DNA-binding domain IUD21_06265 PF07694 5TMR of 5TMR-LYT IUD21_06265 PF06580 Histidine kinase IUD21_06270 PF02230 Phospholipase/Carboxylesterase IUD21_06275 PF13632 Glycosyl transferase family group 2 IUD21_06290 PF01209 ubiE/COQ5 methyltransferase family IUD21_06320 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IUD21_06330 PF00294 pfkB family carbohydrate kinase IUD21_06335 PF07690 Major Facilitator Superfamily IUD21_06345 PF04102 SlyX IUD21_06350 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IUD21_06350 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IUD21_06350 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IUD21_06355 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IUD21_06355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IUD21_06360 PF00255 Glutathione peroxidase IUD21_06365 PF00005 ABC transporter IUD21_06395 PF05973 Phage derived protein Gp49-like (DUF891) IUD21_06400 PF01381 Helix-turn-helix IUD21_06450 PF10876 Phage tail assemb.y chaperone protein, TAC IUD21_06505 PF02899 Phage integrase, N-terminal SAM-like domain IUD21_06505 PF00589 Phage integrase family IUD21_06510 PF00005 ABC transporter IUD21_06510 PF12848 ABC transporter IUD21_06515 PF07715 TonB-dependent Receptor Plug Domain IUD21_06515 PF00593 TonB dependent receptor IUD21_06520 PF01323 DSBA-like thioredoxin domain IUD21_06525 PF00593 TonB dependent receptor IUD21_06525 PF07715 TonB-dependent Receptor Plug Domain IUD21_06530 PF02254 TrkA-N domain IUD21_06530 PF00999 Sodium/hydrogen exchanger family IUD21_06535 PF12849 PBP superfamily domain IUD21_06540 PF00528 Binding-protein-dependent transport system inner membrane component IUD21_06545 PF00528 Binding-protein-dependent transport system inner membrane component IUD21_06550 PF00005 ABC transporter IUD21_06555 PF01895 PhoU domain IUD21_06560 PF00929 Exonuclease IUD21_06565 PF00398 Ribosomal RNA adenine dimethylase IUD21_06570 PF04379 ApaG domain IUD21_06575 PF00149 Calcineurin-like phosphoesterase IUD21_06590 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IUD21_06610 PF00929 Exonuclease IUD21_06615 PF00075 RNase H IUD21_06625 PF00753 Metallo-beta-lactamase superfamily IUD21_06625 PF16123 Hydroxyacylglutathione hydrolase C-terminus IUD21_06645 PF16921 Tex protein YqgF-like domain IUD21_06645 PF09371 Tex-like protein N-terminal domain IUD21_06645 PF00575 S1 RNA binding domain IUD21_06645 PF17674 HHH domain IUD21_06660 PF00719 Inorganic pyrophosphatase IUD21_06665 PF00085 Thioredoxin IUD21_06675 PF00133 tRNA synthetases class I (I, L, M and V) IUD21_06675 PF13603 Leucyl-tRNA synthetase, Domain 2 IUD21_06675 PF08264 Anticodon-binding domain of tRNA IUD21_06690 PF01467 Cytidylyltransferase-like IUD21_06715 PF13406 Transglycosylase SLT domain IUD21_06720 PF03330 Lytic transglycolase IUD21_06720 PF05036 Sporulation related domain IUD21_06770 PF04829 Pre-toxin domain with VENN motif IUD21_06770 PF05860 haemagglutination activity domain IUD21_06770 PF13332 Hemagglutinin repeat IUD21_06830 PF01132 Elongation factor P (EF-P) OB domain IUD21_06830 PF08207 Elongation factor P (EF-P) KOW-like domain IUD21_06830 PF09285 Elongation factor P, C-terminal IUD21_06835 PF01565 FAD binding domain IUD21_06835 PF02913 FAD linked oxidases, C-terminal domain IUD21_06840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IUD21_06840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IUD21_06840 PF01842 ACT domain IUD21_06845 PF13520 Amino acid permease IUD21_06855 PF00596 Class II Aldolase and Adducin N-terminal domain IUD21_06860 PF03079 ARD/ARD' family IUD21_06870 PF01502 Phosphoribosyl-AMP cyclohydrolase IUD21_06870 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IUD21_06875 PF00977 Histidine biosynthesis protein IUD21_06880 PF00977 Histidine biosynthesis protein IUD21_06885 PF00117 Glutamine amidotransferase class-I IUD21_06890 PF00475 Imidazoleglycerol-phosphate dehydratase IUD21_06895 PF00155 Aminotransferase class I and II IUD21_06900 PF00815 Histidinol dehydrogenase IUD21_06905 PF08029 HisG, C-terminal domain IUD21_06905 PF01634 ATP phosphoribosyltransferase IUD21_06915 PF03129 Anticodon binding domain IUD21_06915 PF13393 Histidyl-tRNA synthetase IUD21_06920 PF14821 Threonine synthase N terminus IUD21_06920 PF00291 Pyridoxal-phosphate dependent enzyme IUD21_06925 PF00288 GHMP kinases N terminal domain IUD21_06925 PF08544 GHMP kinases C terminal IUD21_06930 PF00696 Amino acid kinase family IUD21_06930 PF00742 Homoserine dehydrogenase IUD21_06930 PF03447 Homoserine dehydrogenase, NAD binding domain IUD21_06930 PF13840 ACT domain IUD21_06930 PF01842 ACT domain IUD21_06935 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IUD21_06935 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IUD21_06940 PF03652 Holliday junction resolvase IUD21_06945 PF02622 Uncharacterized ACR, COG1678 IUD21_06950 PF07943 Penicillin-binding protein 5, C-terminal domain IUD21_06950 PF00768 D-alanyl-D-alanine carboxypeptidase IUD21_06960 PF00141 Peroxidase IUD21_06970 PF00226 DnaJ domain IUD21_06970 PF01556 DnaJ C terminal domain IUD21_06980 PF00912 Transglycosylase IUD21_06980 PF00905 Penicillin binding protein transpeptidase domain IUD21_06980 PF06832 Penicillin-Binding Protein C-terminus Family IUD21_06990 PF07715 TonB-dependent Receptor Plug Domain IUD21_06990 PF00593 TonB dependent receptor IUD21_06995 PF08281 Sigma-70, region 4 IUD21_06995 PF04542 Sigma-70 region 2 IUD21_07005 PF13180 PDZ domain IUD21_07010 PF03144 Elongation factor Tu domain 2 IUD21_07010 PF00009 Elongation factor Tu GTP binding domain IUD21_07010 PF00679 Elongation factor G C-terminus IUD21_07010 PF06421 GTP-binding protein LepA C-terminus IUD21_07015 PF10502 Signal peptidase, peptidase S26 IUD21_07025 PF00035 Double-stranded RNA binding motif IUD21_07025 PF14622 Ribonuclease-III-like IUD21_07030 PF07650 KH domain IUD21_07030 PF01926 50S ribosome-binding GTPase IUD21_07035 PF02565 Recombination protein O C terminal IUD21_07035 PF11967 Recombination protein O N terminal IUD21_07040 PF02779 Transketolase, pyrimidine binding domain IUD21_07040 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IUD21_07040 PF02780 Transketolase, C-terminal domain IUD21_07045 PF00474 Sodium:solute symporter family IUD21_07055 PF16177 Acetyl-coenzyme A synthetase N-terminus IUD21_07055 PF13193 AMP-binding enzyme C-terminal domain IUD21_07055 PF00501 AMP-binding enzyme IUD21_07060 PF02659 Putative manganese efflux pump IUD21_07070 PF13360 PQQ-like domain IUD21_07075 PF00326 Prolyl oligopeptidase family IUD21_07075 PF07676 WD40-like Beta Propeller Repeat IUD21_07075 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region IUD21_07080 PF03169 OPT oligopeptide transporter protein IUD21_07090 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IUD21_07090 PF01266 FAD dependent oxidoreductase IUD21_07095 PF00230 Major intrinsic protein IUD21_07100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IUD21_07100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IUD21_07110 PF01263 Aldose 1-epimerase IUD21_07115 PF01717 Cobalamin-independent synthase, Catalytic domain IUD21_07115 PF08267 Cobalamin-independent synthase, N-terminal domain IUD21_07120 PF02677 Epoxyqueuosine reductase QueH IUD21_07125 PF00857 Isochorismatase family IUD21_07130 PF00501 AMP-binding enzyme IUD21_07140 PF00535 Glycosyl transferase family 2 IUD21_07145 PF01370 NAD dependent epimerase/dehydratase family IUD21_07150 PF02195 ParB-like nuclease domain IUD21_07150 PF17762 HTH domain found in ParB protein IUD21_07155 PF13614 AAA domain IUD21_07165 PF02403 Seryl-tRNA synthetase N-terminal domain IUD21_07165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IUD21_07170 PF03544 Gram-negative bacterial TonB protein C-terminal IUD21_07200 PF01555 DNA methylase IUD21_07210 PF01541 GIY-YIG catalytic domain IUD21_07210 PF02151 UvrB/uvrC motif IUD21_07210 PF08459 UvrC Helix-hairpin-helix N-terminal IUD21_07215 PF01066 CDP-alcohol phosphatidyltransferase IUD21_07235 PF00490 Delta-aminolevulinic acid dehydratase IUD21_07240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IUD21_07255 PF00202 Aminotransferase class-III IUD21_07260 PF10609 NUBPL iron-transfer P-loop NTPase IUD21_07265 PF02348 Cytidylyltransferase IUD21_07270 PF01451 Low molecular weight phosphotyrosine protein phosphatase IUD21_07275 PF01555 DNA methylase IUD21_07360 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IUD21_07365 PF00800 Prephenate dehydratase IUD21_07365 PF01842 ACT domain IUD21_07365 PF01817 Chorismate mutase type II IUD21_07370 PF00266 Aminotransferase class-V IUD21_07380 PF12679 ABC-2 family transporter protein IUD21_07385 PF00005 ABC transporter IUD21_07395 PF00186 Dihydrofolate reductase IUD21_07400 PF00303 Thymidylate synthase IUD21_07405 PF01790 Prolipoprotein diacylglyceryl transferase IUD21_07410 PF01219 Prokaryotic diacylglycerol kinase IUD21_07415 PF00072 Response regulator receiver domain IUD21_07415 PF00486 Transcriptional regulatory protein, C terminal IUD21_07420 PF01817 Chorismate mutase type II IUD21_07420 PF02153 Prephenate dehydrogenase IUD21_07425 PF00226 DnaJ domain IUD21_07425 PF01556 DnaJ C terminal domain IUD21_07425 PF00684 DnaJ central domain IUD21_07430 PF00012 Hsp70 protein IUD21_07435 PF01025 GrpE IUD21_07440 PF01628 HrcA protein C terminal domain IUD21_07440 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding IUD21_07445 PF02463 RecF/RecN/SMC N terminal domain IUD21_07445 PF13476 AAA domain IUD21_07450 PF01475 Ferric uptake regulator family IUD21_07455 PF04355 SmpA / OmlA family IUD21_07460 PF03658 RnfH family Ubiquitin IUD21_07470 PF01668 SmpB protein IUD21_07480 PF00313 'Cold-shock' DNA-binding domain IUD21_07485 PF01048 Phosphorylase superfamily IUD21_07490 PF00156 Phosphoribosyl transferase domain IUD21_07495 PF00933 Glycosyl hydrolase family 3 N terminal domain IUD21_07500 PF01928 CYTH domain IUD21_07505 PF05958 tRNA (Uracil-5-)-methyltransferase IUD21_07510 PF00486 Transcriptional regulatory protein, C terminal IUD21_07510 PF00072 Response regulator receiver domain IUD21_07515 PF03808 Glycosyl transferase WecB/TagA/CpsF family IUD21_07525 PF14667 Polysaccharide biosynthesis C-terminal domain IUD21_07530 PF00534 Glycosyl transferases group 1 IUD21_07530 PF13439 Glycosyltransferase Family 4 IUD21_07545 PF02397 Bacterial sugar transferase IUD21_07560 PF00180 Isocitrate/isopropylmalate dehydrogenase IUD21_07565 PF00694 Aconitase C-terminal domain IUD21_07570 PF00330 Aconitase family (aconitate hydratase) IUD21_07590 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IUD21_07590 PF14489 QueF-like protein IUD21_07595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUD21_07600 PF00873 AcrB/AcrD/AcrF family IUD21_07605 PF00873 AcrB/AcrD/AcrF family IUD21_07615 PF08240 Alcohol dehydrogenase GroES-like domain IUD21_07615 PF00107 Zinc-binding dehydrogenase IUD21_07635 PF00462 Glutaredoxin IUD21_07640 PF01522 Polysaccharide deacetylase IUD21_07645 PF00155 Aminotransferase class I and II IUD21_07650 PF00664 ABC transporter transmembrane region IUD21_07650 PF00005 ABC transporter IUD21_07650 PF03412 Peptidase C39 family IUD21_07715 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IUD21_07715 PF06594 Haemolysin-type calcium binding protein related domain IUD21_07725 PF13091 PLD-like domain IUD21_07725 PF13087 AAA domain IUD21_07760 PF02401 LytB protein IUD21_07765 PF01252 Signal peptidase (SPase) II IUD21_07770 PF00133 tRNA synthetases class I (I, L, M and V) IUD21_07770 PF08264 Anticodon-binding domain of tRNA IUD21_07770 PF06827 Zinc finger found in FPG and IleRS IUD21_07775 PF01687 Riboflavin kinase IUD21_07775 PF06574 FAD synthetase IUD21_07780 PF03023 Lipid II flippase MurJ IUD21_07785 PF01649 Ribosomal protein S20 IUD21_07790 PF01018 GTP1/OBG IUD21_07790 PF01926 50S ribosome-binding GTPase IUD21_07795 PF01016 Ribosomal L27 protein IUD21_07800 PF00829 Ribosomal prokaryotic L21 protein IUD21_07805 PF17760 UvrA interaction domain IUD21_07805 PF17755 UvrA DNA-binding domain IUD21_07805 PF00005 ABC transporter IUD21_07820 PF02540 NAD synthase IUD21_07820 PF00958 GMP synthase C terminal domain IUD21_07820 PF00117 Glutamine amidotransferase class-I IUD21_07825 PF00478 IMP dehydrogenase / GMP reductase domain IUD21_07825 PF00571 CBS domain IUD21_07830 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IUD21_07830 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IUD21_07835 PF00483 Nucleotidyl transferase IUD21_07840 PF02719 Polysaccharide biosynthesis protein IUD21_07845 PF00953 Glycosyl transferase family 4 IUD21_07850 PF18073 Rubredoxin metal binding domain IUD21_07860 PF00216 Bacterial DNA-binding protein IUD21_07865 PF00575 S1 RNA binding domain IUD21_07870 PF02224 Cytidylate kinase IUD21_07875 PF00444 Ribosomal protein L36 IUD21_07885 PF04371 Porphyromonas-type peptidyl-arginine deiminase IUD21_07890 PF00795 Carbon-nitrogen hydrolase IUD21_07905 PF00528 Binding-protein-dependent transport system inner membrane component IUD21_07910 PF00528 Binding-protein-dependent transport system inner membrane component IUD21_07935 PF02616 Segregation and condensation protein ScpA IUD21_07940 PF04079 Segregation and condensation complex subunit ScpB IUD21_07945 PF01479 S4 domain IUD21_07945 PF00849 RNA pseudouridylate synthase IUD21_07955 PF00795 Carbon-nitrogen hydrolase IUD21_07960 PF00155 Aminotransferase class I and II IUD21_07965 PF00005 ABC transporter IUD21_07970 PF03379 CcmB protein IUD21_07975 PF01578 Cytochrome C assembly protein IUD21_07985 PF03100 CcmE IUD21_07990 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IUD21_07990 PF01578 Cytochrome C assembly protein IUD21_07995 PF08534 Redoxin IUD21_08000 PF03918 Cytochrome C biogenesis protein IUD21_08015 PF00561 alpha/beta hydrolase fold IUD21_08020 PF00295 Glycosyl hydrolases family 28 IUD21_08035 PF13419 Haloacid dehalogenase-like hydrolase IUD21_08045 PF01979 Amidohydrolase family IUD21_08050 PF01132 Elongation factor P (EF-P) OB domain IUD21_08050 PF08207 Elongation factor P (EF-P) KOW-like domain IUD21_08050 PF09285 Elongation factor P, C-terminal IUD21_08055 PF04055 Radical SAM superfamily IUD21_08060 PF00588 SpoU rRNA Methylase family IUD21_08065 PF00459 Inositol monophosphatase family IUD21_08085 PF09115 DNA polymerase III, delta subunit, C terminal IUD21_08090 PF02618 YceG-like family IUD21_08095 PF00425 chorismate binding enzyme IUD21_08095 PF04715 Anthranilate synthase component I, N terminal region IUD21_08100 PF00109 Beta-ketoacyl synthase, N-terminal domain IUD21_08100 PF02801 Beta-ketoacyl synthase, C-terminal domain IUD21_08105 PF00550 Phosphopantetheine attachment site IUD21_08115 PF00698 Acyl transferase domain IUD21_08120 PF00456 Transketolase, thiamine diphosphate binding domain IUD21_08120 PF17831 Pyruvate dehydrogenase E1 component middle domain IUD21_08125 PF06594 Haemolysin-type calcium binding protein related domain IUD21_08125 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IUD21_08155 PF00348 Polyprenyl synthetase IUD21_08160 PF02609 Exonuclease VII small subunit IUD21_08165 PF11734 TilS substrate C-terminal domain IUD21_08165 PF09179 TilS substrate binding domain IUD21_08165 PF01171 PP-loop family IUD21_08170 PF00245 Alkaline phosphatase IUD21_08175 PF00375 Sodium:dicarboxylate symporter family IUD21_08180 PF00877 NlpC/P60 family IUD21_08185 PF00877 NlpC/P60 family IUD21_08190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IUD21_08195 PF04235 Protein of unknown function (DUF418) IUD21_08205 PF00730 HhH-GPD superfamily base excision DNA repair protein IUD21_08205 PF00633 Helix-hairpin-helix motif IUD21_08205 PF10576 Iron-sulfur binding domain of endonuclease III IUD21_08215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IUD21_08215 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IUD21_08250 PF08501 Shikimate dehydrogenase substrate binding domain IUD21_08250 PF01488 Shikimate / quinate 5-dehydrogenase IUD21_08250 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IUD21_08260 PF02581 Thiamine monophosphate synthase IUD21_08260 PF08543 Phosphomethylpyrimidine kinase IUD21_08265 PF02683 Cytochrome C biogenesis protein transmembrane region IUD21_08265 PF11412 Disulphide bond corrector protein DsbC IUD21_08270 PF03091 CutA1 divalent ion tolerance protein IUD21_08275 PF00166 Chaperonin 10 Kd subunit IUD21_08280 PF00118 TCP-1/cpn60 chaperonin family IUD21_08305 PF01370 NAD dependent epimerase/dehydratase family IUD21_08310 PF01370 NAD dependent epimerase/dehydratase family IUD21_08315 PF16363 GDP-mannose 4,6 dehydratase IUD21_08330 PF00291 Pyridoxal-phosphate dependent enzyme IUD21_08350 PF07715 TonB-dependent Receptor Plug Domain IUD21_08350 PF00593 TonB dependent receptor IUD21_08355 PF18331 PKHD-type hydroxylase C-terminal domain IUD21_08355 PF13640 2OG-Fe(II) oxygenase superfamily IUD21_08375 PF02424 ApbE family IUD21_08385 PF01636 Phosphotransferase enzyme family IUD21_08390 PF00483 Nucleotidyl transferase IUD21_08395 PF00308 Bacterial dnaA protein IUD21_08400 PF01594 AI-2E family transporter IUD21_08410 PF02769 AIR synthase related protein, C-terminal domain IUD21_08410 PF00586 AIR synthase related protein, N-terminal domain IUD21_08415 PF00551 Formyl transferase IUD21_08430 PF02223 Thymidylate kinase IUD21_08440 PF01431 Peptidase family M13 IUD21_08440 PF05649 Peptidase family M13 IUD21_08450 PF07977 FabA-like domain IUD21_08455 PF01171 PP-loop family IUD21_08460 PF04381 Putative exonuclease, RdgC IUD21_08470 PF00762 Ferrochelatase IUD21_08480 PF02416 mttA/Hcf106 family IUD21_08485 PF02416 mttA/Hcf106 family IUD21_08490 PF00902 Sec-independent protein translocase protein (TatC) IUD21_08500 PF00117 Glutamine amidotransferase class-I IUD21_08500 PF00958 GMP synthase C terminal domain IUD21_08510 PF00127 Copper binding proteins, plastocyanin/azurin family IUD21_08515 PF03193 RsgA GTPase IUD21_08520 PF02021 Uncharacterised protein family UPF0102 IUD21_08525 PF04348 LppC putative lipoprotein IUD21_08530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IUD21_08535 PF07715 TonB-dependent Receptor Plug Domain IUD21_08535 PF00593 TonB dependent receptor IUD21_08540 PF09334 tRNA synthetases class I (M) IUD21_08540 PF01588 Putative tRNA binding domain IUD21_08550 PF04060 Putative Fe-S cluster IUD21_08605 PF01807 CHC2 zinc finger IUD21_08605 PF08275 DNA primase catalytic core, N-terminal domain IUD21_08625 PF00436 Single-strand binding protein family IUD21_08670 PF00114 Pilin (bacterial filament) IUD21_08670 PF07963 Prokaryotic N-terminal methylation motif IUD21_08675 PF05567 Neisseria PilC beta-propeller domain IUD21_08695 PF07963 Prokaryotic N-terminal methylation motif IUD21_08695 PF14245 Type IV pilin PilA IUD21_08700 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases IUD21_08700 PF11892 Domain of unknown function (DUF3412) IUD21_08700 PF03641 Possible lysine decarboxylase IUD21_08705 PF00563 EAL domain IUD21_08705 PF12792 CSS motif domain associated with EAL IUD21_08710 PF00899 ThiF family IUD21_08715 PF01926 50S ribosome-binding GTPase IUD21_08715 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IUD21_08720 PF13360 PQQ-like domain IUD21_08720 PF01011 PQQ enzyme repeat IUD21_08740 PF04055 Radical SAM superfamily IUD21_08745 PF00334 Nucleoside diphosphate kinase IUD21_08750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IUD21_08750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IUD21_08755 PF00709 Adenylosuccinate synthetase IUD21_08765 PF01145 SPFH domain / Band 7 family IUD21_08770 PF01145 SPFH domain / Band 7 family IUD21_08770 PF12221 Bacterial membrane protein N terminal IUD21_08775 PF08240 Alcohol dehydrogenase GroES-like domain IUD21_08775 PF00107 Zinc-binding dehydrogenase IUD21_08780 PF00072 Response regulator receiver domain IUD21_08795 PF03129 Anticodon binding domain IUD21_08795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IUD21_08795 PF04073 Aminoacyl-tRNA editing domain IUD21_08805 PF01066 CDP-alcohol phosphatidyltransferase IUD21_08820 PF01915 Glycosyl hydrolase family 3 C-terminal domain IUD21_08820 PF00933 Glycosyl hydrolase family 3 N terminal domain IUD21_08820 PF14310 Fibronectin type III-like domain IUD21_08825 PF00924 Mechanosensitive ion channel IUD21_08830 PF02152 Dihydroneopterin aldolase IUD21_08835 PF00814 Glycoprotease family IUD21_08840 PF01165 Ribosomal protein S21 IUD21_08845 PF09424 Yqey-like protein IUD21_08850 PF03631 Virulence factor BrkB IUD21_08855 PF01807 CHC2 zinc finger IUD21_08855 PF08275 DNA primase catalytic core, N-terminal domain IUD21_08855 PF08278 DNA primase DnaG DnaB-binding IUD21_08855 PF10410 DnaB-helicase binding domain of primase IUD21_08865 PF01555 DNA methylase IUD21_08875 PF00579 tRNA synthetases class I (W and Y) IUD21_08880 PF13538 UvrD-like helicase C-terminal domain IUD21_08890 PF00580 UvrD/REP helicase N-terminal domain IUD21_08890 PF13361 UvrD-like helicase C-terminal domain IUD21_08890 PF12705 PD-(D/E)XK nuclease superfamily IUD21_08895 PF17946 RecC C-terminal domain IUD21_08900 PF00005 ABC transporter IUD21_08905 PF02405 Permease MlaE IUD21_08915 PF05494 MlaC protein IUD21_08925 PF04333 MlaA lipoprotein IUD21_08930 PF02646 RmuC family IUD21_08935 PF00005 ABC transporter IUD21_08945 PF13520 Amino acid permease IUD21_08950 PF10672 S-adenosylmethionine-dependent methyltransferase IUD21_08950 PF17785 PUA-like domain IUD21_08955 PF03741 Integral membrane protein TerC family IUD21_08960 PF01521 Iron-sulphur cluster biosynthesis IUD21_08975 PF00486 Transcriptional regulatory protein, C terminal IUD21_08975 PF00072 Response regulator receiver domain IUD21_08985 PF00210 Ferritin-like domain IUD21_08995 PF00293 NUDIX domain IUD21_09010 PF02773 S-adenosylmethionine synthetase, C-terminal domain IUD21_09010 PF02772 S-adenosylmethionine synthetase, central domain IUD21_09010 PF00438 S-adenosylmethionine synthetase, N-terminal domain IUD21_09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_09020 PF00072 Response regulator receiver domain IUD21_09020 PF00486 Transcriptional regulatory protein, C terminal IUD21_09030 PF01207 Dihydrouridine synthase (Dus) IUD21_09040 PF07715 TonB-dependent Receptor Plug Domain IUD21_09040 PF00593 TonB dependent receptor IUD21_09055 PF17871 AAA lid domain IUD21_09055 PF00004 ATPase family associated with various cellular activities (AAA) IUD21_09055 PF07724 AAA domain (Cdc48 subfamily) IUD21_09055 PF02861 Clp amino terminal domain, pathogenicity island component IUD21_09055 PF10431 C-terminal, D2-small domain, of ClpB protein IUD21_09060 PF00301 Rubredoxin IUD21_09065 PF02581 Thiamine monophosphate synthase IUD21_09075 PF08019 Phosphoethanolamine transferase EptA/EptB IUD21_09075 PF00884 Sulfatase IUD21_09085 PF11741 AMIN domain IUD21_09085 PF07660 Secretin and TonB N terminus short domain IUD21_09085 PF03958 Bacterial type II/III secretion system short domain IUD21_09085 PF00263 Bacterial type II and III secretion system protein IUD21_09090 PF04351 Pilus assembly protein, PilP IUD21_09095 PF04350 Pilus assembly protein, PilO IUD21_09100 PF05137 Fimbrial assembly protein (PilN) IUD21_09105 PF11104 Type IV pilus assembly protein PilM; IUD21_09110 PF00905 Penicillin binding protein transpeptidase domain IUD21_09110 PF17092 Penicillin-binding protein OB-like domain IUD21_09110 PF00912 Transglycosylase IUD21_09115 PF00248 Aldo/keto reductase family IUD21_09120 PF00294 pfkB family carbohydrate kinase IUD21_09125 PF05736 OprF membrane domain IUD21_09125 PF00691 OmpA family IUD21_09130 PF00772 DnaB-like helicase N terminal domain IUD21_09130 PF03796 DnaB-like helicase C terminal domain IUD21_09150 PF00067 Cytochrome P450 IUD21_09160 PF00271 Helicase conserved C-terminal domain IUD21_09160 PF00270 DEAD/DEAH box helicase IUD21_09160 PF17191 RecG wedge domain IUD21_09165 PF01042 Endoribonuclease L-PSP IUD21_09170 PF02824 TGS domain IUD21_09170 PF13291 ACT domain IUD21_09170 PF04607 Region found in RelA / SpoT proteins IUD21_09175 PF01565 FAD binding domain IUD21_09175 PF02913 FAD linked oxidases, C-terminal domain IUD21_09180 PF05736 OprF membrane domain IUD21_09180 PF00691 OmpA family IUD21_09190 PF02600 Disulfide bond formation protein DsbB IUD21_09195 PF00593 TonB dependent receptor IUD21_09195 PF07715 TonB-dependent Receptor Plug Domain IUD21_09200 PF02590 Predicted SPOUT methyltransferase IUD21_09295 PF10548 P22AR C-terminal domain IUD21_09295 PF02498 BRO family, N-terminal domain IUD21_09340 PF17757 UvrB interaction domain IUD21_09340 PF04851 Type III restriction enzyme, res subunit IUD21_09340 PF02151 UvrB/uvrC motif IUD21_09340 PF12344 Ultra-violet resistance protein B IUD21_09340 PF00271 Helicase conserved C-terminal domain IUD21_09355 PF00701 Dihydrodipicolinate synthetase family IUD21_09365 PF00578 AhpC/TSA family IUD21_09385 PF00586 AIR synthase related protein, N-terminal domain IUD21_09385 PF02769 AIR synthase related protein, C-terminal domain IUD21_09390 PF01029 NusB family IUD21_09395 PF00885 6,7-dimethyl-8-ribityllumazine synthase IUD21_09400 PF00925 GTP cyclohydrolase II IUD21_09400 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IUD21_09405 PF00677 Lumazine binding domain IUD21_09410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IUD21_09410 PF01872 RibD C-terminal domain IUD21_09415 PF03477 ATP cone domain IUD21_09425 PF00464 Serine hydroxymethyltransferase IUD21_09430 PF12848 ABC transporter IUD21_09430 PF00005 ABC transporter IUD21_09435 PF06039 Malate:quinone oxidoreductase (Mqo) IUD21_09440 PF04134 Protein of unknown function, DUF393 IUD21_09445 PF02578 Multi-copper polyphenol oxidoreductase laccase IUD21_09450 PF00849 RNA pseudouridylate synthase IUD21_09450 PF01479 S4 domain IUD21_09455 PF13525 Outer membrane lipoprotein IUD21_09465 PF04023 FeoA domain IUD21_09465 PF17910 FeoB cytosolic helical domain IUD21_09465 PF02421 Ferrous iron transport protein B IUD21_09465 PF07670 Nucleoside recognition IUD21_09465 PF07664 Ferrous iron transport protein B C terminus IUD21_09475 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IUD21_09480 PF01189 16S rRNA methyltransferase RsmB/F IUD21_09480 PF01029 NusB family IUD21_09485 PF02911 Formyl transferase, C-terminal domain IUD21_09485 PF00551 Formyl transferase IUD21_09490 PF01327 Polypeptide deformylase IUD21_09500 PF02481 DNA recombination-mediator protein A IUD21_09500 PF17782 DprA winged helix domain IUD21_09505 PF04361 Protein of unknown function (DUF494) IUD21_09510 PF01751 Toprim domain IUD21_09510 PF01131 DNA topoisomerase IUD21_09510 PF13368 Topoisomerase C-terminal repeat IUD21_09515 PF01300 Telomere recombination IUD21_09545 PF04386 Stringent starvation protein B IUD21_09550 PF02798 Glutathione S-transferase, N-terminal domain IUD21_09550 PF00043 Glutathione S-transferase, C-terminal domain IUD21_09555 PF02167 Cytochrome C1 family IUD21_09560 PF00032 Cytochrome b(C-terminal)/b6/petD IUD21_09560 PF00033 Cytochrome b/b6/petB IUD21_09565 PF00355 Rieske [2Fe-2S] domain IUD21_09565 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IUD21_09570 PF01464 Transglycosylase SLT domain IUD21_09575 PF00919 Uncharacterized protein family UPF0004 IUD21_09575 PF04055 Radical SAM superfamily IUD21_09575 PF01938 TRAM domain IUD21_09580 PF02562 PhoH-like protein IUD21_09585 PF02130 Uncharacterized protein family UPF0054 IUD21_09595 PF03471 Transporter associated domain IUD21_09595 PF00571 CBS domain IUD21_09605 PF01544 CorA-like Mg2+ transporter protein IUD21_09660 PF00905 Penicillin binding protein transpeptidase domain IUD21_09660 PF14814 Bifunctional transglycosylase second domain IUD21_09660 PF00912 Transglycosylase IUD21_09670 PF04851 Type III restriction enzyme, res subunit IUD21_09670 PF13307 Helicase C-terminal domain IUD21_09680 PF00484 Carbonic anhydrase IUD21_09690 PF01522 Polysaccharide deacetylase IUD21_09700 PF00005 ABC transporter IUD21_09700 PF09383 NIL domain IUD21_09705 PF00528 Binding-protein-dependent transport system inner membrane component IUD21_09710 PF03180 NLPA lipoprotein IUD21_09720 PF02817 e3 binding domain IUD21_09720 PF00364 Biotin-requiring enzyme IUD21_09720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IUD21_09725 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUD21_09725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IUD21_09730 PF01545 Cation efflux family IUD21_09735 PF01053 Cys/Met metabolism PLP-dependent enzyme IUD21_09740 PF00561 alpha/beta hydrolase fold IUD21_09745 PF01551 Peptidase family M23 IUD21_09755 PF01975 Survival protein SurE IUD21_09765 PF09335 SNARE associated Golgi protein IUD21_09770 PF01476 LysM domain IUD21_09770 PF01551 Peptidase family M23 IUD21_09780 PF00989 PAS fold IUD21_09780 PF00512 His Kinase A (phospho-acceptor) domain IUD21_09780 PF16736 Single Cache-like IUD21_09780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_09785 PF01168 Alanine racemase, N-terminal domain IUD21_09785 PF00842 Alanine racemase, C-terminal domain IUD21_09790 PF01266 FAD dependent oxidoreductase IUD21_09795 PF01641 SelR domain IUD21_09800 PF01476 LysM domain IUD21_09800 PF00704 Glycosyl hydrolases family 18 IUD21_09805 PF00728 Glycosyl hydrolase family 20, catalytic domain IUD21_09805 PF02838 Glycosyl hydrolase family 20, domain 2 IUD21_09805 PF07691 PA14 domain IUD21_09815 PF00933 Glycosyl hydrolase family 3 N terminal domain IUD21_09815 PF07691 PA14 domain IUD21_09815 PF14310 Fibronectin type III-like domain IUD21_09815 PF01915 Glycosyl hydrolase family 3 C-terminal domain IUD21_09830 PF17678 Glycosyl hydrolase family 92 N-terminal domain IUD21_09830 PF07971 Glycosyl hydrolase family 92 IUD21_09835 PF01301 Glycosyl hydrolases family 35 IUD21_09840 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IUD21_09845 PF09312 SurA N-terminal domain IUD21_09845 PF00639 PPIC-type PPIASE domain IUD21_09850 PF03968 OstA-like protein IUD21_09850 PF04453 LPS transport system D IUD21_09855 PF01494 FAD binding domain IUD21_09860 PF01494 FAD binding domain IUD21_09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUD21_09870 PF03466 LysR substrate binding domain IUD21_09875 PF14824 Sirohaem biosynthesis protein central IUD21_09875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IUD21_09875 PF10414 Sirohaem synthase dimerisation region IUD21_09880 PF00291 Pyridoxal-phosphate dependent enzyme IUD21_09900 PF00274 Fructose-bisphosphate aldolase class-I IUD21_09905 PF02887 Pyruvate kinase, alpha/beta domain IUD21_09905 PF00224 Pyruvate kinase, barrel domain IUD21_09910 PF00162 Phosphoglycerate kinase IUD21_09920 PF00749 tRNA synthetases class I (E and Q), catalytic domain IUD21_09925 PF01475 Ferric uptake regulator family IUD21_09935 PF00150 Cellulase (glycosyl hydrolase family 5) IUD21_09935 PF00553 Cellulose binding domain IUD21_09960 PF03330 Lytic transglycolase IUD21_09965 PF07516 SecA Wing and Scaffold domain IUD21_09965 PF01043 SecA preprotein cross-linking domain IUD21_09965 PF07517 SecA DEAD-like domain IUD21_09965 PF02810 SEC-C motif IUD21_09970 PF01551 Peptidase family M23 IUD21_09970 PF01476 LysM domain IUD21_09970 PF08525 Opacity-associated protein A N-terminal motif IUD21_09980 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IUD21_09985 PF00091 Tubulin/FtsZ family, GTPase domain IUD21_09985 PF12327 FtsZ family, C-terminal domain IUD21_09990 PF02491 SHS2 domain inserted in FTSA IUD21_09995 PF08478 POTRA domain, FtsQ-type IUD21_09995 PF03799 Cell division protein FtsQ IUD21_10000 PF07478 D-ala D-ala ligase C-terminus IUD21_10000 PF01820 D-ala D-ala ligase N-terminus IUD21_10005 PF01225 Mur ligase family, catalytic domain IUD21_10005 PF02875 Mur ligase family, glutamate ligase domain IUD21_10005 PF08245 Mur ligase middle domain IUD21_10010 PF03033 Glycosyltransferase family 28 N-terminal domain IUD21_10010 PF04101 Glycosyltransferase family 28 C-terminal domain IUD21_10015 PF01098 Cell cycle protein IUD21_10020 PF00953 Glycosyl transferase family 4 IUD21_10025 PF02875 Mur ligase family, glutamate ligase domain IUD21_10025 PF08245 Mur ligase middle domain IUD21_10025 PF01225 Mur ligase family, catalytic domain IUD21_10030 PF01225 Mur ligase family, catalytic domain IUD21_10030 PF02875 Mur ligase family, glutamate ligase domain IUD21_10030 PF08245 Mur ligase middle domain IUD21_10035 PF00905 Penicillin binding protein transpeptidase domain IUD21_10035 PF03717 Penicillin-binding Protein dimerisation domain IUD21_10040 PF04999 Cell division protein FtsL IUD21_10045 PF01795 MraW methylase family IUD21_10050 PF02381 MraZ protein, putative antitoxin-like IUD21_10055 PF03600 Citrate transporter IUD21_10055 PF02080 TrkA-C domain IUD21_10060 PF02390 Putative methyltransferase IUD21_10065 PF05690 Thiazole biosynthesis protein ThiG IUD21_10070 PF05690 Thiazole biosynthesis protein ThiG IUD21_10070 PF02597 ThiS family IUD21_10110 PF07977 FabA-like domain IUD21_10130 PF00753 Metallo-beta-lactamase superfamily IUD21_10130 PF04273 Putative phosphatase (DUF442) IUD21_10140 PF04143 Sulphur transport IUD21_10150 PF01925 Sulfite exporter TauE/SafE IUD21_10155 PF00692 dUTPase IUD21_10165 PF01119 DNA mismatch repair protein, C-terminal domain IUD21_10165 PF08676 MutL C terminal dimerisation domain IUD21_10170 PF01520 N-acetylmuramoyl-L-alanine amidase IUD21_10170 PF11741 AMIN domain IUD21_10175 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IUD21_10180 PF03853 YjeF-related protein N-terminus IUD21_10180 PF01256 Carbohydrate kinase IUD21_10185 PF02601 Exonuclease VII, large subunit IUD21_10185 PF13742 OB-fold nucleic acid binding domain IUD21_10200 PF01612 3'-5' exonuclease IUD21_10200 PF00570 HRDC domain IUD21_10210 PF01728 FtsJ-like methyltransferase IUD21_10210 PF18125 RlmM ferredoxin-like domain IUD21_10230 PF00216 Bacterial DNA-binding protein IUD21_10235 PF01588 Putative tRNA binding domain IUD21_10235 PF03147 Ferredoxin-fold anticodon binding domain IUD21_10235 PF03484 tRNA synthetase B5 domain IUD21_10235 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IUD21_10235 PF03483 B3/4 domain IUD21_10240 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IUD21_10240 PF01409 tRNA synthetases class II core domain (F) IUD21_10245 PF00453 Ribosomal protein L20 IUD21_10250 PF01632 Ribosomal protein L35 IUD21_10255 PF00707 Translation initiation factor IF-3, C-terminal domain IUD21_10255 PF05198 Translation initiation factor IF-3, N-terminal domain IUD21_10260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IUD21_10260 PF02824 TGS domain IUD21_10260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IUD21_10260 PF03129 Anticodon binding domain IUD21_10275 PF08443 RimK-like ATP-grasp domain IUD21_10275 PF18030 RimK PreATP-grasp domain IUD21_10280 PF00486 Transcriptional regulatory protein, C terminal IUD21_10280 PF00072 Response regulator receiver domain IUD21_10285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_10285 PF00672 HAMP domain IUD21_10285 PF00512 His Kinase A (phospho-acceptor) domain IUD21_10290 PF01121 Dephospho-CoA kinase IUD21_10295 PF06750 Bacterial Peptidase A24 N-terminal domain IUD21_10295 PF01478 Type IV leader peptidase family IUD21_10300 PF00482 Type II secretion system (T2SS), protein F IUD21_10305 PF00114 Pilin (bacterial filament) IUD21_10305 PF07963 Prokaryotic N-terminal methylation motif IUD21_10315 PF00114 Pilin (bacterial filament) IUD21_10315 PF07963 Prokaryotic N-terminal methylation motif IUD21_10320 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IUD21_10320 PF00437 Type II/IV secretion system protein IUD21_10325 PF02954 Bacterial regulatory protein, Fis family IUD21_10325 PF00072 Response regulator receiver domain IUD21_10325 PF00158 Sigma-54 interaction domain IUD21_10330 PF00512 His Kinase A (phospho-acceptor) domain IUD21_10330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_10335 PF00549 CoA-ligase IUD21_10335 PF08442 ATP-grasp domain IUD21_10340 PF02629 CoA binding domain IUD21_10340 PF00549 CoA-ligase IUD21_10350 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IUD21_10350 PF08479 POTRA domain, ShlB-type IUD21_10350 PF17287 POTRA domain IUD21_10360 PF03989 DNA gyrase C-terminal domain, beta-propeller IUD21_10360 PF00521 DNA gyrase/topoisomerase IV, subunit A IUD21_10365 PF01008 Initiation factor 2 subunit family IUD21_10375 PF00152 tRNA synthetases class II (D, K and N) IUD21_10385 PF00533 BRCA1 C Terminus (BRCT) domain IUD21_10385 PF01653 NAD-dependent DNA ligase adenylation domain IUD21_10385 PF12826 Helix-hairpin-helix motif IUD21_10385 PF03120 NAD-dependent DNA ligase OB-fold domain IUD21_10385 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IUD21_10390 PF04354 ZipA, C-terminal FtsZ-binding domain IUD21_10395 PF02463 RecF/RecN/SMC N terminal domain IUD21_10400 PF03948 Ribosomal protein L9, C-terminal domain IUD21_10400 PF01281 Ribosomal protein L9, N-terminal domain IUD21_10405 PF01084 Ribosomal protein S18 IUD21_10410 PF01250 Ribosomal protein S6 IUD21_10415 PF01521 Iron-sulphur cluster biosynthesis IUD21_10420 PF00152 tRNA synthetases class II (D, K and N) IUD21_10420 PF01336 OB-fold nucleic acid binding domain IUD21_10425 PF01061 ABC-2 type transporter IUD21_10430 PF00005 ABC transporter IUD21_10445 PF01180 Dihydroorotate dehydrogenase IUD21_10450 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IUD21_10450 PF01565 FAD binding domain IUD21_10455 PF00892 EamA-like transporter family IUD21_10460 PF01569 PAP2 superfamily IUD21_10465 PF04551 GcpE protein IUD21_10475 PF00072 Response regulator receiver domain IUD21_10480 PF00889 Elongation factor TS IUD21_10485 PF00318 Ribosomal protein S2 IUD21_10495 PF00664 ABC transporter transmembrane region IUD21_10495 PF00005 ABC transporter IUD21_10505 PF02321 Outer membrane efflux protein IUD21_10510 PF00149 Calcineurin-like phosphoesterase IUD21_10515 PF02541 Ppx/GppA phosphatase family IUD21_10520 PF13089 Polyphosphate kinase N-terminal domain IUD21_10520 PF17941 Polyphosphate kinase C-terminal domain 1 IUD21_10520 PF13090 Polyphosphate kinase C-terminal domain 2 IUD21_10520 PF02503 Polyphosphate kinase middle domain IUD21_10525 PF11808 Phosphate regulon sensor protein PhoR IUD21_10525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUD21_10525 PF00512 His Kinase A (phospho-acceptor) domain IUD21_10525 PF00989 PAS fold IUD21_10530 PF00072 Response regulator receiver domain IUD21_10530 PF00486 Transcriptional regulatory protein, C terminal IUD21_10535 PF01435 Peptidase family M48 IUD21_10535 PF13181 Tetratricopeptide repeat IUD21_10540 PF00462 Glutaredoxin IUD21_10545 PF18324 Hypothetical protein TT1725 IUD21_10545 PF00180 Isocitrate/isopropylmalate dehydrogenase IUD21_10555 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IUD21_10555 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IUD21_10560 PF00884 Sulfatase IUD21_10560 PF11893 Domain of unknown function (DUF3413) IUD21_10565 PF11953 Domain of unknown function (DUF3470) IUD21_10565 PF00037 4Fe-4S binding domain IUD21_10575 PF01106 NifU-like domain IUD21_10580 PF01329 Pterin 4 alpha carbinolamine dehydratase IUD21_10590 PF01479 S4 domain IUD21_10590 PF00849 RNA pseudouridylate synthase IUD21_10595 PF12111 Polyribonucleotide phosphorylase C terminal IUD21_10595 PF10150 Ribonuclease E/G family IUD21_10595 PF00575 S1 RNA binding domain IUD21_10600 PF00072 Response regulator receiver domain IUD21_10600 PF00196 Bacterial regulatory proteins, luxR family IUD21_10605 PF17773 UPF0176 acylphosphatase like domain IUD21_10615 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IUD21_10615 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IUD21_10620 PF00545 ribonuclease IUD21_10630 PF16326 ABC transporter C-terminal domain IUD21_10630 PF12848 ABC transporter IUD21_10630 PF00005 ABC transporter IUD21_10640 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IUD21_10645 PF00313 'Cold-shock' DNA-binding domain IUD21_10650 PF00563 EAL domain IUD21_10650 PF00990 Diguanylate cyclase, GGDEF domain IUD21_10650 PF00072 Response regulator receiver domain IUD21_10655 PF01435 Peptidase family M48 IUD21_10660 PF03144 Elongation factor Tu domain 2 IUD21_10660 PF00009 Elongation factor Tu GTP binding domain IUD21_10660 PF03143 Elongation factor Tu C-terminal domain IUD21_10665 PF00679 Elongation factor G C-terminus IUD21_10665 PF14492 Elongation Factor G, domain II IUD21_10665 PF03764 Elongation factor G, domain IV IUD21_10665 PF00009 Elongation factor Tu GTP binding domain IUD21_10665 PF03144 Elongation factor Tu domain 2 IUD21_10670 PF00177 Ribosomal protein S7p/S5e IUD21_10675 PF00164 Ribosomal protein S12/S23 IUD21_10680 PF04998 RNA polymerase Rpb1, domain 5 IUD21_10680 PF04997 RNA polymerase Rpb1, domain 1 IUD21_10680 PF00623 RNA polymerase Rpb1, domain 2 IUD21_10680 PF04983 RNA polymerase Rpb1, domain 3 IUD21_10680 PF05000 RNA polymerase Rpb1, domain 4 IUD21_10685 PF04561 RNA polymerase Rpb2, domain 2 IUD21_10685 PF04565 RNA polymerase Rpb2, domain 3 IUD21_10685 PF04563 RNA polymerase beta subunit IUD21_10685 PF04560 RNA polymerase Rpb2, domain 7 IUD21_10685 PF10385 RNA polymerase beta subunit external 1 domain IUD21_10685 PF00562 RNA polymerase Rpb2, domain 6 IUD21_10690 PF00542 Ribosomal protein L7/L12 C-terminal domain IUD21_10690 PF16320 Ribosomal protein L7/L12 dimerisation domain IUD21_10695 PF00466 Ribosomal protein L10 IUD21_10700 PF00687 Ribosomal protein L1p/L10e family IUD21_10705 PF03946 Ribosomal protein L11, N-terminal domain IUD21_10705 PF00298 Ribosomal protein L11, RNA binding domain IUD21_10710 PF02357 Transcription termination factor nusG IUD21_10710 PF00467 KOW motif IUD21_10725 PF03144 Elongation factor Tu domain 2 IUD21_10725 PF03143 Elongation factor Tu C-terminal domain IUD21_10725 PF00009 Elongation factor Tu GTP binding domain IUD21_10745 PF01926 50S ribosome-binding GTPase IUD21_10745 PF06071 Protein of unknown function (DUF933) IUD21_10750 PF01195 Peptidyl-tRNA hydrolase IUD21_10755 PF01386 Ribosomal L25p family IUD21_10755 PF14693 Ribosomal protein TL5, C-terminal domain IUD21_10760 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IUD21_10760 PF14572 Phosphoribosyl synthetase-associated domain IUD21_10770 PF00288 GHMP kinases N terminal domain IUD21_10770 PF08544 GHMP kinases C terminal IUD21_10775 PF03550 Outer membrane lipoprotein LolB IUD21_10785 PF01488 Shikimate / quinate 5-dehydrogenase IUD21_10785 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IUD21_10785 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IUD21_10790 PF00472 RF-1 domain IUD21_10790 PF03462 PCRF domain IUD21_10795 PF10672 S-adenosylmethionine-dependent methyltransferase IUD21_10795 PF02926 THUMP domain IUD21_10795 PF01170 Putative RNA methylase family UPF0020 IUD21_10840 PF01914 MarC family integral membrane protein IUD21_10850 PF00462 Glutaredoxin IUD21_10855 PF02222 ATP-grasp domain IUD21_10855 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IUD21_10860 PF00731 AIR carboxylase IUD21_10875 PF07731 Multicopper oxidase IUD21_10875 PF07732 Multicopper oxidase IUD21_10885 PF00580 UvrD/REP helicase N-terminal domain IUD21_10885 PF13361 UvrD-like helicase C-terminal domain IUD21_10890 PF04349 Periplasmic glucan biosynthesis protein, MdoG IUD21_10895 PF01343 Peptidase family S49 IUD21_10900 PF01554 MatE IUD21_10915 PF17764 3′ DNA-binding domain (3′BD) IUD21_10915 PF00270 DEAD/DEAH box helicase IUD21_10915 PF00271 Helicase conserved C-terminal domain IUD21_10915 PF18074 Primosomal protein N C-terminal domain IUD21_10915 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IUD21_10925 PF04542 Sigma-70 region 2 IUD21_10925 PF04545 Sigma-70, region 4 IUD21_10930 PF03167 Uracil DNA glycosylase superfamily IUD21_10935 PF00072 Response regulator receiver domain IUD21_10935 PF01339 CheB methylesterase IUD21_10940 PF18075 FtsX extracellular domain IUD21_10945 PF00005 ABC transporter IUD21_10950 PF12300 ATP-dependent RNA helicase RhlB IUD21_10950 PF00270 DEAD/DEAH box helicase IUD21_10950 PF00271 Helicase conserved C-terminal domain IUD21_10955 PF00085 Thioredoxin IUD21_10960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IUD21_10960 PF07497 Rho termination factor, RNA-binding domain IUD21_10960 PF07498 Rho termination factor, N-terminal domain IUD21_10965 PF03971 Monomeric isocitrate dehydrogenase IUD21_10975 PF03572 Peptidase family S41 IUD21_10975 PF13180 PDZ domain IUD21_10980 PF01551 Peptidase family M23 IUD21_10995 PF00150 Cellulase (glycosyl hydrolase family 5) IUD21_11000 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUD21_11000 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IUD21_11005 PF00310 Glutamine amidotransferases class-II IUD21_11005 PF01645 Conserved region in glutamate synthase IUD21_11005 PF01493 GXGXG motif IUD21_11005 PF04898 Glutamate synthase central domain IUD21_11010 PF14748 Pyrroline-5-carboxylate reductase dimerisation IUD21_11010 PF03807 NADP oxidoreductase coenzyme F420-dependent IUD21_11055 PF11867 Domain of unknown function (DUF3387) IUD21_11055 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IUD21_11055 PF18766 SWI2/SNF2 ATPase IUD21_11065 PF12161 HsdM N-terminal domain IUD21_11065 PF02384 N-6 DNA Methylase IUD21_11075 PF18766 SWI2/SNF2 ATPase IUD21_11075 PF12008 Type I restriction and modification enzyme - subunit R C terminal IUD21_11075 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IUD21_11080 PF01420 Type I restriction modification DNA specificity domain IUD21_11090 PF02384 N-6 DNA Methylase IUD21_11090 PF12161 HsdM N-terminal domain IUD21_11095 PF01810 LysE type translocator IUD21_11110 PF11855 Protein of unknown function (DUF3375) IUD21_11210 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IUD21_11210 PF06594 Haemolysin-type calcium binding protein related domain IUD21_11225 PF06594 Haemolysin-type calcium binding protein related domain IUD21_11225 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IUD21_11260 PF01381 Helix-turn-helix IUD21_11265 PF05973 Phage derived protein Gp49-like (DUF891) IUD21_11335 PF13332 Hemagglutinin repeat IUD21_11335 PF05860 haemagglutination activity domain IUD21_11335 PF13018 Extended Signal Peptide of Type V secretion system IUD21_11335 PF04829 Pre-toxin domain with VENN motif IUD21_11340 PF12631 MnmE helical domain IUD21_11340 PF01926 50S ribosome-binding GTPase IUD21_11340 PF10396 GTP-binding protein TrmE N-terminus IUD21_11350 PF02096 60Kd inner membrane protein IUD21_11350 PF14849 YidC periplasmic domain IUD21_11355 PF00825 Ribonuclease P IUD21_11360 PF00468 Ribosomal protein L34 IUD21_11370 PF03135 CagE, TrbE, VirB family, component of type IV transporter system IUD21_11380 PF03524 Conjugal transfer protein IUD21_11390 PF03743 Bacterial conjugation TrbI-like protein IUD21_11425 PF00239 Resolvase, N terminal domain IUD21_11450 PF08401 Domain of unknown function (DUF1738) IUD21_11450 PF13362 Toprim domain IUD21_11450 PF18818 Metallopeptidase superfamily domain IUD21_11460 PF01131 DNA topoisomerase IUD21_11460 PF01751 Toprim domain IUD21_11465 PF10502 Signal peptidase, peptidase S26 IUD21_11470 PF02534 Type IV secretory system Conjugative DNA transfer IUD21_11475 PF18821 Large polyvalent protein-associated domain 7 IUD21_11475 PF03432 Relaxase/Mobilisation nuclease domain IUD21_11490 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IUD21_11495 PF11657 Transcriptional activator TraM IUD21_11510 PF06613 KorB C-terminal beta-barrel domain IUD21_11510 PF02195 ParB-like nuclease domain IUD21_11510 PF08535 KorB domain IUD21_11515 PF13614 AAA domain IUD21_11520 PF16509 TrfB plasmid transcriptional repressor IUD21_11530 PF12323 Helix-turn-helix domain IUD21_11530 PF01385 Probable transposase IUD21_11530 PF07282 Putative transposase DNA-binding domain IUD21_11535 PF17394 Uncharacterized KleE stable inheritance protein IUD21_11550 PF00436 Single-strand binding protein family IUD21_11555 PF16509 TrfB plasmid transcriptional repressor IUD21_11560 PF00437 Type II/IV secretion system protein