locus-tag	class	description
IUD21_00010	COG0592	DNA-directed DNA polymerase activity
IUD21_00020	COG0187	DNA topoisomerase II activity
IUD21_00030	COG0501	Belongs to the peptidase M48B family
IUD21_00060	COG0823	Involved in the tonB-independent uptake of proteins
IUD21_00060	COG4946	Tricorn protease homolog
IUD21_00060	COG1506	peptidase
IUD21_00090	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
IUD21_00150	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
IUD21_00160	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
IUD21_00170	COG0511	ligase activity, forming carbon-carbon bonds
IUD21_00175	COG0439	Biotin carboxylase
IUD21_00180	COG0210	DNA helicase
IUD21_00210	COG1040	competence protein
IUD21_00220	COG1752	Esterase of the alpha-beta hydrolase superfamily
IUD21_00260	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
IUD21_00270	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
IUD21_00295	COG3121	Chaperone
IUD21_00300	COG3539	Fimbrial protein
IUD21_00310	COG1546	Belongs to the CinA family
IUD21_00315	COG0477	Major facilitator Superfamily
IUD21_00320	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
IUD21_00335	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
IUD21_00340	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
IUD21_00350	COG1534	Rna-binding protein
IUD21_00380	COG1560	Kdo2-lipid A biosynthetic process
IUD21_00385	COG1519	Transferase
IUD21_00425	COG1393	Belongs to the ArsC family
IUD21_00435	COG0367	asparagine synthase
IUD21_00445	COG2070	2-Nitropropane dioxygenase
IUD21_00475	COG0339	signal peptide processing
IUD21_00490	COG2132	Multicopper oxidase
IUD21_00520	COG0795	lipopolysaccharide-transporting ATPase activity
IUD21_00555	COG4221	oxidoreductase activity
IUD21_00575	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
IUD21_00595	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IUD21_00645	COG2223	nitrite transmembrane transporter activity
IUD21_00655	COG0739	heme binding
IUD21_00690	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
IUD21_00705	COG1028	Short-chain dehydrogenase reductase Sdr
IUD21_00715	COG1272	protein, Hemolysin III
IUD21_00720	COG0463	Glycosyl transferase, family 2
IUD21_00725	COG0084	hydrolase, TatD family'
IUD21_00755	COG0330	HflC and HflK could
IUD21_00760	COG3956	TIGRFAM MazG family protein
IUD21_00765	COG1218	3'(2'),5'-bisphosphate nucleotidase
IUD21_00770	COG0494	nUDIX hydrolase
IUD21_00780	COG1385	rRNA (uridine-N3-)-methyltransferase activity
IUD21_00785	COG0513	Belongs to the DEAD box helicase family
IUD21_00790	COG0720	synthase
IUD21_00815	COG1981	membrane
IUD21_00850	COG0512	Glutamine amidotransferase of anthranilate synthase
IUD21_00880	COG0006	proline dipeptidase activity
IUD21_00900	COG1862	Preprotein translocase
IUD21_00905	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IUD21_00910	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IUD21_00920	COG0617	tRNA 3'-terminal CCA addition
IUD21_00960	COG0195	Participates in both transcription termination and antitermination
IUD21_00990	COG1733	regulation of RNA biosynthetic process
IUD21_00995	COG0702	epimerase
IUD21_01040	COG2086	electron transfer activity
IUD21_01070	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IUD21_01095	COG0477	Major facilitator Superfamily
IUD21_01115	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
IUD21_01120	COG0671	phosphoesterase, PA-phosphatase related
IUD21_01135	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
IUD21_01140	COG0628	permease
IUD21_01160	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IUD21_01165	COG1090	epimerase
IUD21_01170	COG0318	PFAM AMP-dependent synthetase and ligase
IUD21_01190	COG1049	propionate catabolic process, 2-methylcitrate cycle
IUD21_01235	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IUD21_01260	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
IUD21_01280	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
IUD21_01285	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
IUD21_01290	COG1034	ATP synthesis coupled electron transport
IUD21_01325	COG1007	ATP synthesis coupled electron transport
IUD21_01330	COG1028	Short-chain dehydrogenase reductase Sdr
IUD21_01335	COG2851	Citrate transporter
IUD21_01350	COG0642	Histidine kinase
IUD21_01365	COG2205	protein histidine kinase activity
IUD21_01365	COG0784	Response regulator, receiver
IUD21_01385	COG0280	phosphate acetyltransferase
IUD21_01385	COG0281	malic enzyme
IUD21_01395	COG0742	ribosomal rna small subunit methyltransferase
IUD21_01415	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
IUD21_01435	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
IUD21_01460	COG2166	iron-sulfur cluster assembly
IUD21_01490	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IUD21_01565	COG1321	iron dependent repressor
IUD21_01585	COG1946	Acyl-CoA thioesterase
IUD21_01675	COG0575	Belongs to the CDS family
IUD21_01770	COG0354	folic acid binding
IUD21_01780	COG2009	succinate dehydrogenase
IUD21_01785	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
IUD21_01795	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
IUD21_01825	COG0811	peptide transport
IUD21_01875	COG3093	addiction module antidote protein HigA
IUD21_01885	COG2944	sequence-specific DNA binding
IUD21_01950	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
IUD21_01970	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IUD21_02040	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
IUD21_02065	COG1024	Enoyl-CoA hydratase
IUD21_02070	COG0019	diaminopimelate decarboxylase activity
IUD21_02090	COG0494	nUDIX hydrolase
IUD21_02095	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
IUD21_02120	COG0312	modulator of DNA gyrase
IUD21_02130	COG0312	modulator of DNA gyrase
IUD21_02135	COG0583	DNA-binding transcription factor activity
IUD21_02150	COG1064	alcohol dehydrogenase
IUD21_02205	COG0356	it plays a direct role in the translocation of protons across the membrane
IUD21_02325	COG0201	protein transport
IUD21_02355	COG2960	long-chain fatty acid transporting porin activity
IUD21_02360	COG0606	chelatase, subunit chli
IUD21_02385	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
IUD21_02445	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IUD21_02450	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IUD21_02465	COG1187	pseudouridine synthase activity
IUD21_02470	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IUD21_02490	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IUD21_02495	COG0625	glutathione transferase activity
IUD21_02505	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
IUD21_02510	COG1217	gtp-binding protein TYPA
IUD21_02550	COG0842	Transport permease protein
IUD21_02555	COG1131	(ABC) transporter
IUD21_02575	COG1643	Atp-dependent helicase
IUD21_02585	COG1956	GAF domain-containing protein
IUD21_02590	COG0729	surface antigen
IUD21_02595	COG2911	Protein conserved in bacteria
IUD21_02605	COG0582	viral genome integration into host DNA
IUD21_02770	COG0668	transmembrane transport
IUD21_02800	COG5297	Belongs to the glycosyl hydrolase family 6
IUD21_02835	COG2733	membrane
IUD21_02840	COG1253	flavin adenine dinucleotide binding
IUD21_02905	COG0644	oxidoreductase
IUD21_02905	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
IUD21_02920	COG3218	ABC-type transport auxiliary lipoprotein component
IUD21_02920	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
IUD21_02925	COG1127	ABC transporter
IUD21_02930	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
IUD21_02965	COG1077	Cell shape determining protein MreB Mrl
IUD21_02970	COG1792	Involved in formation and maintenance of cell shape
IUD21_02975	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
IUD21_02980	COG0768	penicillin binding
IUD21_02985	COG0772	Belongs to the SEDS family
IUD21_02995	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IUD21_03015	COG2894	cell division
IUD21_03035	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
IUD21_03050	COG2353	YceI-like domain
IUD21_03120	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
IUD21_03125	COG4208	sulfate ABC transporter
IUD21_03150	COG1846	Transcriptional regulator
IUD21_03190	COG0741	lytic transglycosylase activity
IUD21_03200	COG1999	signal sequence binding
IUD21_03225	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
IUD21_03260	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IUD21_03270	COG0514	ATP-dependent DNA helicase (RecQ)
IUD21_03275	COG0783	Belongs to the Dps family
IUD21_03280	COG1643	Atp-dependent helicase
IUD21_03290	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
IUD21_03295	COG1845	cytochrome c oxidase, subunit III
IUD21_03300	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
IUD21_03305	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
IUD21_03310	COG0142	geranyltranstransferase activity
IUD21_03325	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
IUD21_03345	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IUD21_03380	COG1137	ATPase activity
IUD21_03395	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
IUD21_03405	COG0271	Belongs to the BolA IbaG family
IUD21_03445	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
IUD21_03455	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IUD21_03485	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
IUD21_03515	COG0542	response to heat
IUD21_03535	COG0492	ferredoxin-NADP+ reductase activity
IUD21_03555	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
IUD21_03565	COG4191	Histidine kinase
IUD21_03570	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
IUD21_03575	COG1028	Short-chain dehydrogenase reductase Sdr
IUD21_03605	COG1609	Transcriptional regulator
IUD21_03610	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
IUD21_03615	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
IUD21_03620	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
IUD21_03630	COG0726	polysaccharide deacetylase
IUD21_03635	COG0297	glycogen (starch) synthase activity
IUD21_03655	COG0719	Fe-S assembly protein
IUD21_03660	COG0396	ATPase activity
IUD21_03665	COG0719	Fe-S assembly protein
IUD21_03670	COG1959	2 iron, 2 sulfur cluster binding
IUD21_03725	COG0308	aminopeptidase N
IUD21_03775	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
IUD21_03800	COG1561	YicC-like family, N-terminal region
IUD21_03815	COG0635	Involved in the biosynthesis of porphyrin-containing compound
IUD21_03850	COG5295	Hep Hag repeat protein
IUD21_03855	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IUD21_03860	COG1459	type II secretion system
IUD21_03870	COG2165	general secretion pathway protein
IUD21_03875	COG4970	Tfp pilus assembly protein FimT
IUD21_03880	COG2165	general secretion pathway protein
IUD21_03885	COG4795	General secretion pathway protein
IUD21_03890	COG3156	type II secretion system protein K
IUD21_03895	COG3166	PFAM Fimbrial assembly family protein
IUD21_03910	COG1450	Type ii and iii secretion system protein
IUD21_03925	COG3634	alkyl hydroperoxide reductase activity
IUD21_03930	COG0583	DNA-binding transcription factor activity
IUD21_03990	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
IUD21_04015	COG0567	Dehydrogenase, E1 component
IUD21_04020	COG2850	peptidyl-arginine hydroxylation
IUD21_04035	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
IUD21_04135	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IUD21_04140	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IUD21_04145	COG2902	Dehydrogenase
IUD21_04185	COG2925	Exonuclease
IUD21_04195	COG0025	NhaP-type Na H and K H
IUD21_04215	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
IUD21_04240	COG0006	proline dipeptidase activity
IUD21_04250	COG0778	Nitroreductase
IUD21_04285	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
IUD21_04325	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IUD21_04335	COG0557	exoribonuclease II activity
IUD21_04345	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
IUD21_04360	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
IUD21_04365	COG1289	transmembrane transporter activity
IUD21_04385	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
IUD21_04395	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
IUD21_04410	COG0596	Alpha beta hydrolase
IUD21_04415	COG0727	PFAM Uncharacterised protein family (UPF0153)
IUD21_04460	COG0840	transmembrane signaling receptor activity
IUD21_04465	COG2198	Histidine kinase
IUD21_04465	COG0784	Response regulator, receiver
IUD21_04465	COG0643	Histidine kinase
IUD21_04495	COG0285	dihydrofolate synthase activity
IUD21_04505	COG0339	signal peptide processing
IUD21_04525	COG1301	dicarboxylic acid transport
IUD21_04530	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
IUD21_04540	COG2091	lysine biosynthetic process via aminoadipic acid
IUD21_04575	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
IUD21_04605	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
IUD21_04605	COG0512	Glutamine amidotransferase of anthranilate synthase
IUD21_04625	COG0084	hydrolase, TatD family'
IUD21_04645	COG0552	protein localization to endoplasmic reticulum
IUD21_04690	COG0824	Thioesterase
IUD21_04715	COG2885	chlorophyll binding
IUD21_04725	COG0602	queuosine metabolic process
IUD21_04745	COG0386	Belongs to the glutathione peroxidase family
IUD21_04765	COG0406	alpha-ribazole phosphatase activity
IUD21_05290	COG2369	cell adhesion
IUD21_05340	COG0582	viral genome integration into host DNA
IUD21_05345	COG3567	Phage-associated protein, HI1409 family
IUD21_05350	COG5410	chromosome segregation
IUD21_05375	COG3772	lysozyme
IUD21_05410	COG3617	BRO family, N-terminal domain
IUD21_05495	COG5532	Uncharacterized conserved protein (DUF2303)
IUD21_05525	COG0629	single-stranded DNA binding
IUD21_05535	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
IUD21_05540	COG3852	Histidine kinase
IUD21_05545	COG2204	response regulator
IUD21_05560	COG0004	ammonium transporteR
IUD21_05565	COG0347	Belongs to the P(II) protein family
IUD21_05570	COG0174	glutamine synthetase
IUD21_05580	COG2353	YceI-like domain
IUD21_05635	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
IUD21_05640	COG1764	response to oxidative stress
IUD21_05645	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
IUD21_05690	COG1399	metal-binding, possibly nucleic acid-binding protein
IUD21_05700	COG0714	Associated with various cellular activities
IUD21_05720	COG0537	adenosine 5'-monophosphoramidase activity
IUD21_05735	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
IUD21_05775	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IUD21_05800	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
IUD21_05800	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
IUD21_05850	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
IUD21_05865	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
IUD21_05880	COG0251	oxidation-reduction process
IUD21_05945	COG3077	Addiction module antitoxin, RelB DinJ family
IUD21_05950	COG3041	Addiction module toxin RelE StbE family
IUD21_06020	COG3772	lysozyme
IUD21_06085	COG4197	protein conserved in bacteria, prophage-related
IUD21_06160	COG3617	BRO family, N-terminal domain
IUD21_06195	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
IUD21_06200	COG0392	lysyltransferase activity
IUD21_06200	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
IUD21_06210	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
IUD21_06220	COG0463	Glycosyl transferase, family 2
IUD21_06265	COG3275	phosphorelay sensor kinase activity
IUD21_06270	COG0400	carboxylic ester hydrolase activity
IUD21_06290	COG2226	methyltransferase
IUD21_06320	COG2027	D-alanyl-D-alanine carboxypeptidase
IUD21_06330	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IUD21_06360	COG0386	Belongs to the glutathione peroxidase family
IUD21_06365	COG1131	(ABC) transporter
IUD21_06395	COG3657	addiction module killer protein
IUD21_06400	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
IUD21_06505	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
IUD21_06510	COG0488	(ABC) transporter
IUD21_06520	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
IUD21_06530	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
IUD21_06530	COG4651	solute:proton antiporter activity
IUD21_06590	COG0859	PFAM glycosyl transferase family 9
IUD21_06605	COG0631	protein serine/threonine phosphatase activity
IUD21_06610	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IUD21_06645	COG2183	response to ionizing radiation
IUD21_06660	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
IUD21_06665	COG3118	belongs to the thioredoxin family
IUD21_06715	COG2951	lytic endotransglycosylase activity
IUD21_06720	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
IUD21_06835	COG0277	FAD linked oxidase domain protein
IUD21_06840	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
IUD21_06845	COG0531	amino acid
IUD21_06930	COG0527	aspartate kinase activity
IUD21_06930	COG0460	homoserine dehydrogenase
IUD21_06950	COG1686	Belongs to the peptidase S11 family
IUD21_06980	COG4953	penicillin-binding protein 1C
IUD21_07005	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IUD21_07070	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IUD21_07075	COG0823	Involved in the tonB-independent uptake of proteins
IUD21_07075	COG1506	peptidase
IUD21_07080	COG1297	OPT oligopeptide transporter protein
IUD21_07110	COG0676	glucose-6-phosphate 1-epimerase activity
IUD21_07120	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
IUD21_07125	COG1335	isochorismatase
IUD21_07130	COG0318	PFAM AMP-dependent synthetase and ligase
IUD21_07140	COG0463	Glycosyl transferase, family 2
IUD21_07155	COG1192	Involved in chromosome partitioning
IUD21_07215	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
IUD21_07260	COG0489	protein tyrosine kinase activity
IUD21_07270	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IUD21_07365	COG0077	Prephenate dehydratase
IUD21_07365	COG1605	Chorismate mutase
IUD21_07380	COG1668	transmembrane transport
IUD21_07385	COG4555	ABC transporter
IUD21_07410	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
IUD21_07420	COG0287	Prephenate dehydrogenase
IUD21_07420	COG1605	Chorismate mutase
IUD21_07455	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IUD21_07480	COG1278	Cold shock
IUD21_07490	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
IUD21_07500	COG2954	triphosphatase activity
IUD21_07515	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
IUD21_07520	COG0438	transferase activity, transferring glycosyl groups
IUD21_07530	COG0438	transferase activity, transferring glycosyl groups
IUD21_07595	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IUD21_07600	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IUD21_07615	COG1064	alcohol dehydrogenase
IUD21_07635	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
IUD21_07645	COG0436	Aminotransferase
IUD21_07725	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
IUD21_07725	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IUD21_07775	COG0196	riboflavin kinase activity
IUD21_07780	COG0728	peptidoglycan biosynthetic process
IUD21_07785	COG0268	Binds directly to 16S ribosomal RNA
IUD21_07835	COG1210	Utp--glucose-1-phosphate uridylyltransferase
IUD21_07850	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
IUD21_07905	COG0395	ABC-type sugar transport system, permease component
IUD21_07910	COG1175	transmembrane transport
IUD21_07940	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
IUD21_07960	COG0436	Aminotransferase
IUD21_08020	COG5434	Belongs to the glycosyl hydrolase 28 family
IUD21_08045	COG0402	S-adenosylhomocysteine deaminase activity
IUD21_08055	COG1509	lysine 2,3-aminomutase activity
IUD21_08090	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
IUD21_08095	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
IUD21_08110	COG1028	Short-chain dehydrogenase reductase Sdr
IUD21_08155	COG0142	geranyltranstransferase activity
IUD21_08175	COG1301	dicarboxylic acid transport
IUD21_08180	COG0791	NLP P60 protein
IUD21_08185	COG0791	NLP P60 protein
IUD21_08195	COG2311	Membrane
IUD21_08205	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
IUD21_08260	COG0351	phosphomethylpyrimidine kinase
IUD21_08260	COG0352	thiamine-phosphate diphosphorylase activity
IUD21_08270	COG1324	tolerance protein
IUD21_08305	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
IUD21_08310	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
IUD21_08315	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
IUD21_08330	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
IUD21_08350	COG4774	siderophore transport
IUD21_08375	COG1477	protein flavinylation
IUD21_08380	COG1555	photosystem II stabilization
IUD21_08385	COG3178	'Phosphotransferase
IUD21_08390	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
IUD21_08400	COG0628	permease
IUD21_08415	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
IUD21_08440	COG3590	peptidase
IUD21_08490	COG0805	protein transport
IUD21_08500	COG0519	Catalyzes the synthesis of GMP from XMP
IUD21_08500	COG0518	GMP synthase (glutamine-hydrolyzing) activity
IUD21_08510	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
IUD21_08525	COG3107	peptidoglycan biosynthetic process
IUD21_08550	COG2878	Part of a membrane complex involved in electron transport
IUD21_08625	COG0629	single-stranded DNA binding
IUD21_08650	COG0827	DNA restriction-modification system
IUD21_08655	COG0827	DNA restriction-modification system
IUD21_08695	COG4968	Prepilin-type N-terminal cleavage methylation domain
IUD21_08700	COG1611	Belongs to the LOG family
IUD21_08705	COG4943	cyclic-guanylate-specific phosphodiesterase activity
IUD21_08710	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
IUD21_08720	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IUD21_08750	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
IUD21_08765	COG0330	HflC and HflK could
IUD21_08770	COG0330	HflC and HflK could
IUD21_08775	COG0604	alcohol dehydrogenase
IUD21_08805	COG1183	phosphatidylcholine synthase activity
IUD21_08825	COG0668	transmembrane transport
IUD21_08830	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
IUD21_08845	COG1610	YqeY-like protein
IUD21_08855	COG0358	DNA primase activity
IUD21_08890	COG1074	ATP-dependent DNA helicase activity
IUD21_08895	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
IUD21_08900	COG1127	ABC transporter
IUD21_08905	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
IUD21_08925	COG2853	Lipoprotein
IUD21_08935	COG1116	anion transmembrane transporter activity
IUD21_08945	COG0531	amino acid
IUD21_08950	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
IUD21_08955	COG0861	Integral membrane protein TerC family
IUD21_08985	COG2193	ferroxidase activity
IUD21_09075	COG2194	sulfuric ester hydrolase activity
IUD21_09115	COG0667	Aldo Keto reductase
IUD21_09120	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IUD21_09130	COG0305	Participates in initiation and elongation during chromosome replication
IUD21_09160	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
IUD21_09170	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IUD21_09175	COG0277	FAD linked oxidase domain protein
IUD21_09195	COG4206	TonB-dependent receptor
IUD21_09295	COG3617	BRO family, N-terminal domain
IUD21_09365	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
IUD21_09385	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
IUD21_09410	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IUD21_09410	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IUD21_09430	COG0488	(ABC) transporter
IUD21_09440	COG3011	Protein conserved in bacteria
IUD21_09465	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
IUD21_09465	COG1918	ferrous iron import across plasma membrane
IUD21_09475	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
IUD21_09500	COG0758	DNA mediated transformation
IUD21_09545	COG2969	positive regulation of protein catabolic process
IUD21_09550	COG0625	glutathione transferase activity
IUD21_09555	COG2857	Cytochrome c1
IUD21_09560	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
IUD21_09565	COG0723	plastoquinol--plastocyanin reductase activity
IUD21_09570	COG0741	lytic transglycosylase activity
IUD21_09580	COG1702	phosphate starvation-inducible protein PhoH
IUD21_09595	COG4535	Mg2 and Co2 transporter CorC
IUD21_09605	COG0598	Magnesium transport protein CorA
IUD21_09660	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IUD21_09670	COG1199	ATP-dependent helicase activity
IUD21_09680	COG0288	reversible hydration of carbon dioxide
IUD21_09705	COG2011	ABC-type metal ion transport system permease component
IUD21_09720	COG0508	dehydrogenase complex catalyzes the overall conversion of
IUD21_09725	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IUD21_09735	COG0626	cystathionine gamma-synthase activity
IUD21_09740	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
IUD21_09745	COG0739	heme binding
IUD21_09765	COG1238	metal cluster binding
IUD21_09780	COG5002	protein histidine kinase activity
IUD21_09800	COG3858	chitin binding
IUD21_09800	COG1388	LysM domain
IUD21_09805	COG3525	Glycosyl hydrolase, family 20, catalytic domain
IUD21_09815	COG1472	Belongs to the glycosyl hydrolase 3 family
IUD21_09830	COG3537	Alpha-1,2-mannosidase
IUD21_09855	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IUD21_09860	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IUD21_09905	COG0469	pyruvate kinase activity
IUD21_09925	COG0735	belongs to the Fur family
IUD21_09935	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
IUD21_09935	COG5297	Belongs to the glycosyl hydrolase family 6
IUD21_09960	COG4305	rare lipoprotein A
IUD21_09970	COG0739	heme binding
IUD21_09985	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
IUD21_09995	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
IUD21_10025	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
IUD21_10040	COG3116	cell division
IUD21_10055	COG0471	metal ion transport
IUD21_10055	COG3273	potassium ion transport
IUD21_10110	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
IUD21_10170	COG0860	N-Acetylmuramoyl-L-alanine amidase
IUD21_10175	COG0802	atpase or kinase
IUD21_10180	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
IUD21_10180	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
IUD21_10280	COG0745	RESPONSE REGULATOR receiver
IUD21_10285	COG0642	Histidine kinase
IUD21_10295	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
IUD21_10340	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
IUD21_10350	COG2831	hemolysin activation secretion protein
IUD21_10375	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
IUD21_10415	COG0316	Belongs to the HesB IscA family
IUD21_10455	COG0697	spore germination
IUD21_10460	COG0671	phosphoesterase, PA-phosphatase related
IUD21_10475	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
IUD21_10495	COG1132	(ABC) transporter
IUD21_10500	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
IUD21_10505	COG1538	Outer membrane efflux protein
IUD21_10530	COG0745	RESPONSE REGULATOR receiver
IUD21_10535	COG4783	chaperone-mediated protein folding
IUD21_10545	COG0473	3-isopropylmalate dehydrogenase activity
IUD21_10555	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
IUD21_10560	COG3083	sulfuric ester hydrolase activity
IUD21_10565	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
IUD21_10590	COG0564	pseudouridine synthase activity
IUD21_10595	COG1530	ribonuclease E activity
IUD21_10600	COG2197	response regulator
IUD21_10615	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
IUD21_10630	COG0488	(ABC) transporter
IUD21_10645	COG1278	Cold shock
IUD21_10745	COG0012	GTP binding
IUD21_10840	COG2095	MarC family integral membrane protein
IUD21_10850	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
IUD21_10875	COG2132	Multicopper oxidase
IUD21_10885	COG0210	DNA helicase
IUD21_10895	COG0616	signal peptide processing
IUD21_10915	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
IUD21_10935	COG2201	protein-glutamate methylesterase activity
IUD21_10940	COG2177	Part of the ABC transporter FtsEX involved in
IUD21_10945	COG2884	Cell division ATP-binding protein ftsE
IUD21_10955	COG3118	belongs to the thioredoxin family
IUD21_10960	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
IUD21_10975	COG0793	Belongs to the peptidase S41A family
IUD21_10980	COG4942	peptidase
IUD21_10995	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
IUD21_11000	COG0493	'glutamate synthase
IUD21_11005	COG0069	glutamate synthase activity
IUD21_11005	COG0067	glutamate synthase
IUD21_11005	COG0070	glutamate synthase
IUD21_11055	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
IUD21_11110	COG4942	peptidase
IUD21_11260	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
IUD21_11265	COG3657	addiction module killer protein
IUD21_11335	COG3210	domain, Protein
IUD21_11370	COG3451	type IV secretory pathway VirB4
IUD21_11425	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
IUD21_11530	COG0675	Transposase, IS605 OrfB family
IUD21_11550	COG0629	single-stranded DNA binding
IUD21_11560	COG4962	Type ii secretion system protein e