XFLM_00005	SM00382	ATPases associated with a variety of cellular activities
XFLM_00045	SM00382	ATPases associated with a variety of cellular activities
XFLM_00055	SM00479	XFLM_00055
XFLM_00060	SM00650	Ribosomal RNA adenine dimethylases
XFLM_00100	SM00331	Sigma factor PP2C-like phosphatases
XFLM_00100	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
XFLM_00105	SM00479	XFLM_00105
XFLM_00120	SM00849	Metallo-beta-lactamase superfamily
XFLM_00130	SM00316	Ribosomal protein S1-like RNA-binding domain
XFLM_00130	SM00732	Likely ribonuclease with RNase H fold.
XFLM_00135	SM00028	Tetratricopeptide repeats
XFLM_00285	SM00912	haemagglutination activity domain
XFLM_00325	SM00841	Elongation factor P, C-terminal
XFLM_00325	SM01185	XFLM_00325
XFLM_00350	SM01007	Class II Aldolase and Adducin N-terminal domain
XFLM_00435	SM00732	Likely ribonuclease with RNase H fold.
XFLM_00445	SM00936	Penicillin-binding protein 5, C-terminal domain 
XFLM_00465	SM00271	DnaJ molecular chaperone homology domain
XFLM_00510	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
XFLM_00515	SM00838	Elongation factor G C-terminus
XFLM_00535	SM00358	Double-stranded RNA binding motif
XFLM_00535	SM00535	Ribonuclease III family
XFLM_00550	SM00861	Transketolase, pyrimidine binding domain
XFLM_00585	SM00564	beta-propeller repeat
XFLM_00655	SM01259	XFLM_00655
XFLM_00670	SM00470	ParB-like nuclease domain
XFLM_00680	SM00849	Metallo-beta-lactamase superfamily
XFLM_00730	SM00278	Helix-hairpin-helix DNA-binding motif class 1
XFLM_00730	SM00465	GIY-YIG type nucleases (URI domain)
XFLM_00755	SM01004	Delta-aminolevulinic acid dehydratase
XFLM_00795	SM00226	Low molecular weight phosphatase family
XFLM_00810	SM00530	Helix-turn-helix XRE-family like proteins 
XFLM_00905	SM00830	Chorismate mutase type II
XFLM_00925	SM00382	ATPases associated with a variety of cellular activities
XFLM_00960	SM00448	cheY-homologous receiver domain
XFLM_00960	SM00862	Transcriptional regulatory protein, C terminal
XFLM_01025	SM00869	Autotransporter beta-domain
XFLM_01030	SM00357	Cold shock protein domain
XFLM_01055	SM01118	XFLM_01055
XFLM_01065	SM00448	cheY-homologous receiver domain
XFLM_01130	SM01329	XFLM_01130
XFLM_01185	SM00829	Enoylreductase
XFLM_01210	SM00450	Rhodanese Homology Domain
XFLM_01225	SM00382	ATPases associated with a variety of cellular activities
XFLM_01380	SM00904	Riboflavin kinase
XFLM_01430	SM00116	Domain in cystathionine beta-synthase and other proteins.
XFLM_01430	SM01240	XFLM_01430
XFLM_01455	SM00028	Tetratricopeptide repeats
XFLM_01465	SM00411	bacterial (prokaryotic) histone like domain
XFLM_01470	SM00316	Ribosomal protein S1-like RNA-binding domain
XFLM_01555	SM00363	S4 RNA-binding domain
XFLM_01575	SM00382	ATPases associated with a variety of cellular activities
XFLM_01615	SM00028	Tetratricopeptide repeats
XFLM_01655	SM00841	Elongation factor P, C-terminal
XFLM_01655	SM01185	XFLM_01655
XFLM_01705	SM00825	Beta-ketoacyl synthase
XFLM_01715	SM00822	XFLM_01715
XFLM_01720	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
XFLM_01770	SM00977	TilS substrate C-terminal domain
XFLM_01780	SM00098	Alkaline phosphatase homologues
XFLM_01820	SM01160	XFLM_01820
XFLM_01830	SM00478	endonuclease III
XFLM_01830	SM00525	XFLM_01830
XFLM_01900	SM00883	Chaperonin 10 Kd subunit
XFLM_01955	SM00116	Domain in cystathionine beta-synthase and other proteins.
XFLM_02025	SM00382	ATPases associated with a variety of cellular activities
XFLM_02255	SM00400	zinc finger
XFLM_02350	SM00052	Putative diguanylate phosphodiesterase
XFLM_02355	SM00450	Rhodanese Homology Domain
XFLM_02365	SM00382	ATPases associated with a variety of cellular activities
XFLM_02370	SM00564	beta-propeller repeat
XFLM_02385	SM00028	Tetratricopeptide repeats
XFLM_02395	SM00562	XFLM_02395
XFLM_02400	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
XFLM_02405	SM00788	Adenylosuccinate synthetase
XFLM_02415	SM00244	prohibitin homologues
XFLM_02420	SM00244	prohibitin homologues
XFLM_02425	SM00829	Enoylreductase
XFLM_02430	SM00448	cheY-homologous receiver domain
XFLM_02440	SM00528	Domain in histone-like proteins of HNS family
XFLM_02470	SM01217	XFLM_02470
XFLM_02480	SM00905	Dihydroneopterin aldolase
XFLM_02510	SM00400	zinc finger
XFLM_02510	SM00493	XFLM_02510
XFLM_02510	SM00766	DNA primase DnaG DnaB-binding
XFLM_02560	SM00382	ATPases associated with a variety of cellular activities
XFLM_02605	SM00382	ATPases associated with a variety of cellular activities
XFLM_02655	SM00052	Putative diguanylate phosphodiesterase
XFLM_02655	SM00448	cheY-homologous receiver domain
XFLM_02680	SM00387	Histidine kinase-like ATPases
XFLM_02685	SM00448	cheY-homologous receiver domain
XFLM_02685	SM00862	Transcriptional regulatory protein, C terminal
XFLM_02715	SM00382	ATPases associated with a variety of cellular activities
XFLM_02715	SM01086	C-terminal, D2-small domain, of ClpB protein
XFLM_02745	SM00965	Secretin and TonB N terminus short domain
XFLM_02810	SM00487	DEAD-like helicases superfamily
XFLM_02810	SM00490	helicase superfamily c-terminal domain
XFLM_02820	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
XFLM_02820	SM00954	Region found in RelA / SpoT proteins
XFLM_02965	SM01040	BRO family, N-terminal domain
XFLM_02970	SM00482	DNA polymerase A domain
XFLM_02975	SM00990	XFLM_02975
XFLM_02985	SM00487	DEAD-like helicases superfamily
XFLM_03010	SM00487	DEAD-like helicases superfamily
XFLM_03010	SM00490	helicase superfamily c-terminal domain
XFLM_03025	SM01130	XFLM_03025
XFLM_03120	SM00382	ATPases associated with a variety of cellular activities
XFLM_03165	SM00899	XFLM_03165
XFLM_03190	SM00257	Lysin motif
XFLM_03205	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
XFLM_03205	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
XFLM_03205	SM00493	XFLM_03205
XFLM_03235	SM00530	Helix-turn-helix XRE-family like proteins 
XFLM_03280	SM00729	Elongator protein 3, MiaB family, Radical SAM
XFLM_03300	SM00116	Domain in cystathionine beta-synthase and other proteins.
XFLM_03300	SM01091	Transporter associated domain
XFLM_03425	SM00947	Carbonic anhydrase
XFLM_03445	SM00382	ATPases associated with a variety of cellular activities
XFLM_03445	SM00930	XFLM_03445
XFLM_03540	SM00257	Lysin motif
XFLM_03545	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
XFLM_03545	SM00387	Histidine kinase-like ATPases
XFLM_03545	SM00388	His Kinase A (phosphoacceptor) domain
XFLM_03555	SM01005	Alanine racemase, C-terminal domain
XFLM_03570	SM00636	XFLM_03570
XFLM_03715	SM00637	XFLM_03715
XFLM_03745	SM00957	SecA DEAD-like domain
XFLM_03745	SM00958	SecA preprotein cross-linking domain
XFLM_03765	SM00864	Tubulin/FtsZ family, GTPase domain
XFLM_03765	SM00865	Tubulin/FtsZ family, C-terminal domain
XFLM_03770	SM00842	Cell division protein FtsA
XFLM_03870	SM00869	Autotransporter beta-domain
XFLM_03920	SM00849	Metallo-beta-lactamase superfamily
XFLM_03925	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
XFLM_03955	SM00853	MutL C terminal dimerisation domain
XFLM_03955	SM01340	XFLM_03955
XFLM_03960	SM00646	XFLM_03960
XFLM_03995	SM00474	3'-5' exonuclease
XFLM_04000	SM00528	Domain in histone-like proteins of HNS family
XFLM_04015	SM00422	helix_turn_helix, mercury resistance
XFLM_04020	SM00411	bacterial (prokaryotic) histone like domain
XFLM_04025	SM00873	B3/4 domain
XFLM_04025	SM00874	tRNA synthetase B5 domain
XFLM_04025	SM00896	Ferredoxin-fold anticodon binding domain
XFLM_04050	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
XFLM_04075	SM00448	cheY-homologous receiver domain
XFLM_04075	SM00862	Transcriptional regulatory protein, C terminal
XFLM_04080	SM00387	Histidine kinase-like ATPases
XFLM_04080	SM00388	His Kinase A (phosphoacceptor) domain
XFLM_04125	SM00382	ATPases associated with a variety of cellular activities
XFLM_04125	SM00448	cheY-homologous receiver domain
XFLM_04130	SM00387	Histidine kinase-like ATPases
XFLM_04130	SM00388	His Kinase A (phosphoacceptor) domain
XFLM_04140	SM00881	CoA binding domain
XFLM_04195	SM00292	breast cancer carboxy-terminal domain
XFLM_04195	SM00532	Ligase N family
XFLM_04205	SM00771	ZipA, C-terminal domain (FtsZ-binding)
XFLM_04210	SM00968	SMC proteins Flexible Hinge Domain
XFLM_04245	SM00382	ATPases associated with a variety of cellular activities
XFLM_04275	SM00014	Acid phosphatase homologues
XFLM_04285	SM00387	Histidine kinase-like ATPases
XFLM_04290	SM00448	cheY-homologous receiver domain
XFLM_04305	SM00382	ATPases associated with a variety of cellular activities
XFLM_04340	SM00387	Histidine kinase-like ATPases
XFLM_04340	SM00388	His Kinase A (phosphoacceptor) domain
XFLM_04345	SM00448	cheY-homologous receiver domain
XFLM_04345	SM00862	Transcriptional regulatory protein, C terminal
XFLM_04360	SM01329	XFLM_04360
XFLM_04410	SM00363	S4 RNA-binding domain
XFLM_04420	SM00316	Ribosomal protein S1-like RNA-binding domain
XFLM_04425	SM00421	helix_turn_helix, Lux Regulon
XFLM_04425	SM00448	cheY-homologous receiver domain
XFLM_04430	SM00450	Rhodanese Homology Domain
XFLM_04440	SM00448	cheY-homologous receiver domain
XFLM_04460	SM00382	ATPases associated with a variety of cellular activities
XFLM_04470	SM00357	Cold shock protein domain
XFLM_04475	SM00052	Putative diguanylate phosphodiesterase
XFLM_04475	SM00267	diguanylate cyclase
XFLM_04490	SM00838	Elongation factor G C-terminus
XFLM_04490	SM00889	Elongation factor G, domain IV
XFLM_04505	SM00663	RNA polymerase I subunit A N-terminus
XFLM_04535	SM00649	Ribosomal protein L11/L12
XFLM_04540	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
XFLM_04540	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
XFLM_04575	SM01400	XFLM_04575
XFLM_04590	SM00028	Tetratricopeptide repeats
XFLM_04600	SM00937	XFLM_04600
XFLM_04605	SM00981	XFLM_04605
XFLM_04615	SM00644	XFLM_04615
XFLM_04670	SM01001	AIR carboxylase
XFLM_04735	SM00487	DEAD-like helicases superfamily
XFLM_04735	SM00490	helicase superfamily c-terminal domain
XFLM_04750	SM00986	Uracil DNA glycosylase superfamily
XFLM_04750	SM00987	UreE urease accessory protein, C-terminal domain 
XFLM_04755	SM00448	cheY-homologous receiver domain
XFLM_04765	SM00382	ATPases associated with a variety of cellular activities
XFLM_04770	SM00487	DEAD-like helicases superfamily
XFLM_04770	SM00490	helicase superfamily c-terminal domain
XFLM_04780	SM00357	Cold shock protein domain
XFLM_04780	SM00382	ATPases associated with a variety of cellular activities
XFLM_04780	SM00959	Rho termination factor, N-terminal domain
XFLM_04795	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
XFLM_04795	SM00245	tail specific protease
XFLM_04845	SM00812	Alpha-L-fucosidase
XFLM_04885	SM00487	DEAD-like helicases superfamily
XFLM_05220	SM00382	ATPases associated with a variety of cellular activities
XFLM_05220	SM00760	Bacterial dnaA protein helix-turn-helix domain
XFLM_05225	SM00480	DNA polymerase III beta subunit
XFLM_05240	SM00387	Histidine kinase-like ATPases
XFLM_05240	SM00433	TopoisomeraseII
XFLM_05260	SM00028	Tetratricopeptide repeats
XFLM_05360	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
XFLM_05425	SM00878	Biotin carboxylase C-terminal domain
XFLM_05455	SM00470	ParB-like nuclease domain
XFLM_05475	SM00729	Elongator protein 3, MiaB family, Radical SAM
XFLM_05475	SM00876	Biotin and Thiamin Synthesis associated domain
XFLM_05505	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
XFLM_05505	SM01232	XFLM_05505
XFLM_05520	SM00382	ATPases associated with a variety of cellular activities
XFLM_05520	SM00962	SRP54-type protein, GTPase domain
XFLM_05520	SM00963	SRP54-type protein, helical bundle domain
XFLM_05610	SM00382	ATPases associated with a variety of cellular activities
XFLM_05620	SM01103	XFLM_05620
XFLM_05660	SM00812	Alpha-L-fucosidase
XFLM_05715	SM01172	XFLM_05715
XFLM_05720	SM00710	Parallel beta-helix repeats
XFLM_05720	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
XFLM_05740	SM00382	ATPases associated with a variety of cellular activities
XFLM_05745	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
XFLM_05860	SM00836	DALR anticodon binding domain
XFLM_05860	SM01016	Arginyl tRNA synthetase N terminal dom
XFLM_05955	SM00363	S4 RNA-binding domain
XFLM_05965	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
XFLM_05965	SM01232	XFLM_05965
XFLM_05985	SM00822	XFLM_05985
XFLM_06045	SM00244	prohibitin homologues
XFLM_06075	SM00487	DEAD-like helicases superfamily
XFLM_06075	SM00490	helicase superfamily c-terminal domain
XFLM_06095	SM00563	Phosphate acyltransferases
XFLM_06120	SM00481	DNA polymerase alpha chain like domain
XFLM_06130	SM00271	DnaJ molecular chaperone homology domain
XFLM_06165	SM00347	helix_turn_helix multiple antibiotic resistance protein
XFLM_06195	SM01323	XFLM_06195
XFLM_06245	SM00316	Ribosomal protein S1-like RNA-binding domain
XFLM_06245	SM00322	K homology RNA-binding domain
XFLM_06265	SM01387	XFLM_06265
XFLM_06270	SM00316	Ribosomal protein S1-like RNA-binding domain
XFLM_06270	SM00322	K homology RNA-binding domain
XFLM_06325	SM00487	DEAD-like helicases superfamily
XFLM_06325	SM00490	helicase superfamily c-terminal domain
XFLM_06330	SM00893	Electron transfer flavoprotein domain
XFLM_06335	SM00893	Electron transfer flavoprotein domain
XFLM_06475	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
XFLM_06500	SM00966	SpoVT / AbrB like domain 
XFLM_06615	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
XFLM_06620	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
XFLM_06685	SM00448	cheY-homologous receiver domain
XFLM_06685	SM00862	Transcriptional regulatory protein, C terminal
XFLM_06690	SM00387	Histidine kinase-like ATPases
XFLM_06690	SM00388	His Kinase A (phosphoacceptor) domain
XFLM_06705	SM00421	helix_turn_helix, Lux Regulon
XFLM_06705	SM00448	cheY-homologous receiver domain
XFLM_06710	SM00387	Histidine kinase-like ATPases
XFLM_06710	SM00388	His Kinase A (phosphoacceptor) domain
XFLM_06710	SM00448	cheY-homologous receiver domain
XFLM_06725	SM00919	Malic enzyme, NAD binding domain
XFLM_06725	SM01274	XFLM_06725
XFLM_06730	SM00387	Histidine kinase-like ATPases
XFLM_06765	SM00267	diguanylate cyclase
XFLM_06780	SM01234	XFLM_06780
XFLM_06810	SM00840	XFLM_06810
XFLM_06845	SM00859	Semialdehyde dehydrogenase, NAD binding domain
XFLM_06855	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
XFLM_06915	SM00529	Helix-turn-helix diphteria tox regulatory element
XFLM_06955	SM00869	Autotransporter beta-domain
XFLM_06960	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
XFLM_06965	SM00563	Phosphate acyltransferases
XFLM_06980	SM00996	S-adenosyl-L-homocysteine hydrolase
XFLM_06980	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
XFLM_07030	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
XFLM_07110	SM00382	ATPases associated with a variety of cellular activities
XFLM_07160	SM00382	ATPases associated with a variety of cellular activities
XFLM_07165	SM00849	Metallo-beta-lactamase superfamily
XFLM_07230	SM00530	Helix-turn-helix XRE-family like proteins 
XFLM_07240	SM00530	Helix-turn-helix XRE-family like proteins 
XFLM_07285	SM00990	XFLM_07285
XFLM_07295	SM00487	DEAD-like helicases superfamily
XFLM_07315	SM00855	Phosphoglycerate mutase family
XFLM_07320	SM00867	YceI-like domain 
XFLM_07325	SM00155	Phospholipase D. Active site motifs.
XFLM_07370	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
XFLM_07370	SM00474	3'-5' exonuclease
XFLM_07370	SM00475	5'-3' exonuclease
XFLM_07370	SM00482	DNA polymerase A domain
XFLM_07385	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
XFLM_07390	SM00851	MGS-like domain
XFLM_07390	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
XFLM_07410	SM00937	XFLM_07410
XFLM_07420	SM00448	cheY-homologous receiver domain
XFLM_07420	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
XFLM_07425	SM00387	Histidine kinase-like ATPases
XFLM_07425	SM00388	His Kinase A (phosphoacceptor) domain
XFLM_07425	SM00448	cheY-homologous receiver domain
XFLM_07475	SM00316	Ribosomal protein S1-like RNA-binding domain
XFLM_07540	SM00830	Chorismate mutase type II
XFLM_07550	SM00382	ATPases associated with a variety of cellular activities
XFLM_07595	SM01403	XFLM_07595
XFLM_07615	SM01382	XFLM_07615
XFLM_07615	SM01383	XFLM_07615
XFLM_07630	SM00322	K homology RNA-binding domain
XFLM_07650	SM01374	XFLM_07650
XFLM_07655	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
XFLM_07715	SM00363	S4 RNA-binding domain
XFLM_07720	SM00662	RNA polymerases D
XFLM_07735	SM00382	ATPases associated with a variety of cellular activities
XFLM_07780	SM00382	ATPases associated with a variety of cellular activities
XFLM_07780	SM00994	ClpX C4-type zinc finger
XFLM_07780	SM01086	C-terminal, D2-small domain, of ClpB protein
XFLM_07785	SM00382	ATPases associated with a variety of cellular activities
XFLM_07785	SM00464	Found in ATP-dependent protease La (LON)
XFLM_07790	SM00411	bacterial (prokaryotic) histone like domain
XFLM_07855	SM00155	Phospholipase D. Active site motifs.
XFLM_07880	SM00838	Elongation factor G C-terminus
XFLM_07920	SM00382	ATPases associated with a variety of cellular activities
XFLM_07940	SM00487	DEAD-like helicases superfamily
XFLM_07940	SM00490	helicase superfamily c-terminal domain
XFLM_07940	SM00847	Helicase associated domain (HA2)  Add an annotation
XFLM_08035	SM01359	XFLM_08035
XFLM_08035	SM01360	XFLM_08035
XFLM_08045	SM00342	helix_turn_helix, arabinose operon control protein
XFLM_08065	SM00479	XFLM_08065
XFLM_08105	SM00637	XFLM_08105
XFLM_08115	SM00729	Elongator protein 3, MiaB family, Radical SAM
XFLM_08150	SM00116	Domain in cystathionine beta-synthase and other proteins.
XFLM_08150	SM01091	Transporter associated domain
XFLM_08195	SM01192	XFLM_08195
XFLM_08195	SM01193	XFLM_08195
XFLM_08215	SM00463	Small MutS-related domain
XFLM_08245	SM00382	ATPases associated with a variety of cellular activities
XFLM_08275	SM00268	Actin
XFLM_08305	SM00954	Region found in RelA / SpoT proteins
XFLM_08355	SM00478	endonuclease III
XFLM_08360	SM00867	YceI-like domain 
XFLM_08370	SM00867	YceI-like domain 
XFLM_08375	SM00387	Histidine kinase-like ATPases
XFLM_08375	SM00388	His Kinase A (phosphoacceptor) domain
XFLM_08375	SM00448	cheY-homologous receiver domain
XFLM_08490	SM00347	helix_turn_helix multiple antibiotic resistance protein
XFLM_08580	SM00859	Semialdehyde dehydrogenase, NAD binding domain
XFLM_08615	SM00382	ATPases associated with a variety of cellular activities
XFLM_08630	SM00341	Helicase and RNase D C-terminal
XFLM_08630	SM00487	DEAD-like helicases superfamily
XFLM_08630	SM00490	helicase superfamily c-terminal domain
XFLM_08630	SM00956	XFLM_08630
XFLM_08640	SM00382	ATPases associated with a variety of cellular activities
XFLM_08640	SM00487	DEAD-like helicases superfamily
XFLM_08640	SM00490	helicase superfamily c-terminal domain
XFLM_08640	SM00847	Helicase associated domain (HA2)  Add an annotation
XFLM_08750	SM00382	ATPases associated with a variety of cellular activities
XFLM_08770	SM00116	Domain in cystathionine beta-synthase and other proteins.
XFLM_08810	SM01211	XFLM_08810
XFLM_08905	SM00382	ATPases associated with a variety of cellular activities
XFLM_08905	SM01086	C-terminal, D2-small domain, of ClpB protein
XFLM_08910	SM00316	Ribosomal protein S1-like RNA-binding domain
XFLM_08930	SM00382	ATPases associated with a variety of cellular activities
XFLM_08930	SM00843	XFLM_08930
XFLM_08945	SM00382	ATPases associated with a variety of cellular activities
XFLM_08960	SM00387	Histidine kinase-like ATPases
XFLM_08960	SM00448	cheY-homologous receiver domain
XFLM_09000	SM00354	helix_turn _helix lactose operon repressor
XFLM_09055	SM00382	ATPases associated with a variety of cellular activities
XFLM_09070	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
XFLM_09105	SM00382	ATPases associated with a variety of cellular activities
XFLM_09105	SM01086	C-terminal, D2-small domain, of ClpB protein
XFLM_09120	SM01263	XFLM_09120
XFLM_09130	SM00347	helix_turn_helix multiple antibiotic resistance protein
XFLM_09135	SM00528	Domain in histone-like proteins of HNS family
XFLM_09140	SM00028	Tetratricopeptide repeats
XFLM_09190	SM01409	XFLM_09190
XFLM_09195	SM00072	Guanylate kinase homologues.
XFLM_09215	SM00729	Elongator protein 3, MiaB family, Radical SAM
XFLM_09255	SM00382	ATPases associated with a variety of cellular activities
XFLM_09370	SM00100	Cyclic nucleotide-monophosphate binding domain
XFLM_09370	SM00419	helix_turn_helix, cAMP Regulatory protein
XFLM_09420	SM00861	Transketolase, pyrimidine binding domain
XFLM_09425	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
XFLM_09455	SM00327	von Willebrand factor (vWF) type A domain
XFLM_09490	SM01228	XFLM_09490
XFLM_09575	SM00857	Resolvase, N terminal domain
XFLM_09580	SM00493	XFLM_09580
XFLM_09585	SM00849	Metallo-beta-lactamase superfamily
XFLM_09595	SM00479	XFLM_09595
XFLM_09645	SM01011	Aminopeptidase P, N-terminal domain
XFLM_09710	SM00530	Helix-turn-helix XRE-family like proteins 
XFLM_09750	SM00316	Ribosomal protein S1-like RNA-binding domain
XFLM_09750	SM00357	Cold shock protein domain
XFLM_09750	SM00955	XFLM_09750
XFLM_09755	SM00967	RNA 2'-O ribose methyltransferase substrate binding
XFLM_09800	SM01209	XFLM_09800
XFLM_09800	SM01210	XFLM_09800
XFLM_09805	SM00798	AICARFT/IMPCHase bienzyme
XFLM_09805	SM00851	MGS-like domain
XFLM_09910	SM00448	cheY-homologous receiver domain
XFLM_09915	SM00260	Two component signalling adaptor domain
XFLM_09920	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
XFLM_09925	SM00073	Histidine Phosphotransfer domain
XFLM_09925	SM00260	Two component signalling adaptor domain
XFLM_09925	SM00387	Histidine kinase-like ATPases
XFLM_09925	SM00448	cheY-homologous receiver domain
XFLM_09925	SM01231	XFLM_09925
XFLM_09970	SM00411	bacterial (prokaryotic) histone like domain
XFLM_10000	SM00861	Transketolase, pyrimidine binding domain
XFLM_10125	SM00507	HNH nucleases
XFLM_10135	SM00382	ATPases associated with a variety of cellular activities
XFLM_10135	SM00962	SRP54-type protein, GTPase domain
XFLM_10135	SM00963	SRP54-type protein, helical bundle domain
XFLM_10140	SM00478	endonuclease III
XFLM_10140	SM00525	XFLM_10140
XFLM_10160	SM00278	Helix-hairpin-helix DNA-binding motif class 1
XFLM_10170	SM00382	ATPases associated with a variety of cellular activities
XFLM_10215	SM00855	Phosphoglycerate mutase family
XFLM_10250	SM00855	Phosphoglycerate mutase family
XFLM_10340	SM00245	tail specific protease
XFLM_10345	SM00869	Autotransporter beta-domain
XFLM_10370	SM00530	Helix-turn-helix XRE-family like proteins 
XFLM_10455	SM00530	Helix-turn-helix XRE-family like proteins 
XFLM_10695	SM01040	BRO family, N-terminal domain
XFLM_10700	SM01040	BRO family, N-terminal domain
XFLM_10800	SM01040	BRO family, N-terminal domain
XFLM_10820	SM00387	Histidine kinase-like ATPases
XFLM_10820	SM00388	His Kinase A (phosphoacceptor) domain
XFLM_10825	SM00382	ATPases associated with a variety of cellular activities
XFLM_10825	SM00448	cheY-homologous receiver domain
XFLM_10840	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
XFLM_10850	SM00938	Nitrogen regulatory protein P-II
XFLM_10855	SM01230	XFLM_10855
XFLM_10870	SM00867	YceI-like domain 
XFLM_10925	SM00833	Cobalamin synthesis protein cobW C-terminal domain
XFLM_10960	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
XFLM_10960	SM00245	tail specific protease
XFLM_10985	SM00917	LeuA allosteric (dimerisation) domain
XFLM_11025	SM00460	Transglutaminase/protease-like homologues
XFLM_11040	SM00493	XFLM_11040
XFLM_11050	SM00382	ATPases associated with a variety of cellular activities
XFLM_11100	SM00450	Rhodanese Homology Domain
XFLM_11180	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
XFLM_11180	SM00534	ATPase domain of DNA mismatch repair MUTS family
XFLM_11360	SM00885	D5 N terminal like
XFLM_11365	SM01040	BRO family, N-terminal domain
XFLM_11395	SM00530	Helix-turn-helix XRE-family like proteins 
XFLM_11450	SM01040	BRO family, N-terminal domain
XFLM_11455	SM00482	DNA polymerase A domain
XFLM_11460	SM00990	XFLM_11460
XFLM_11470	SM00487	DEAD-like helicases superfamily
XFLM_11495	SM00248	ankyrin repeats
XFLM_11500	SM00825	Beta-ketoacyl synthase
XFLM_11530	SM00382	ATPases associated with a variety of cellular activities
XFLM_11555	SM00448	cheY-homologous receiver domain
XFLM_11555	SM00850	LytTr DNA-binding domain
XFLM_11590	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
XFLM_11645	SM00984	UDP binding domain
XFLM_11665	SM00382	ATPases associated with a variety of cellular activities
XFLM_11700	SM00530	Helix-turn-helix XRE-family like proteins 
XFLM_11790	SM00990	XFLM_11790
XFLM_11800	SM00487	DEAD-like helicases superfamily
XFLM_11920	SM00155	Phospholipase D. Active site motifs.
XFLM_12030	SM00857	Resolvase, N terminal domain
XFLM_12085	SM00966	SpoVT / AbrB like domain 
