locus-tag class description D1605_000005 PF00308 Bacterial dnaA protein D1605_000005 PF08299 Bacterial dnaA protein helix-turn-helix D1605_000005 PF11638 DnaA N-terminal domain D1605_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain D1605_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain D1605_000010 PF02767 DNA polymerase III beta subunit, central domain D1605_000015 PF02463 RecF/RecN/SMC N terminal domain D1605_000020 PF00204 DNA gyrase B D1605_000020 PF00986 DNA gyrase B subunit, carboxyl terminus D1605_000020 PF18053 DNA gyrase B subunit insert domain D1605_000020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_000020 PF01751 Toprim domain D1605_000030 PF01435 Peptidase family M48 D1605_000040 PF03544 Gram-negative bacterial TonB protein C-terminal D1605_000045 PF01618 MotA/TolQ/ExbB proton channel family D1605_000050 PF02472 Biopolymer transport protein ExbD/TolR D1605_000055 PF02472 Biopolymer transport protein ExbD/TolR D1605_000060 PF00326 Prolyl oligopeptidase family D1605_000060 PF07676 WD40-like Beta Propeller Repeat D1605_000070 PF01218 Coproporphyrinogen III oxidase D1605_000090 PF00793 DAHP synthetase I family D1605_000115 PF05567 Neisseria PilC beta-propeller domain D1605_000125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1605_000130 PF00155 Aminotransferase class I and II D1605_000135 PF01741 Large-conductance mechanosensitive channel, MscL D1605_000155 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D1605_000165 PF00270 DEAD/DEAH box helicase D1605_000165 PF02559 CarD-like/TRCF domain D1605_000165 PF00271 Helicase conserved C-terminal domain D1605_000165 PF03461 TRCF domain D1605_000165 PF17757 UvrB interaction domain D1605_000170 PF01220 Dehydroquinase class II D1605_000175 PF00364 Biotin-requiring enzyme D1605_000180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1605_000180 PF00289 Biotin carboxylase, N-terminal domain D1605_000180 PF02785 Biotin carboxylase C-terminal domain D1605_000185 PF00580 UvrD/REP helicase N-terminal domain D1605_000185 PF13361 UvrD-like helicase C-terminal domain D1605_000190 PF00970 Oxidoreductase FAD-binding domain D1605_000190 PF00042 Globin D1605_000190 PF00175 Oxidoreductase NAD-binding domain D1605_000200 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D1605_000205 PF08535 KorB domain D1605_000205 PF06613 KorB C-terminal beta-barrel domain D1605_000205 PF02195 ParB-like nuclease domain D1605_000210 PF00156 Phosphoribosyl transferase domain D1605_000215 PF04055 Radical SAM superfamily D1605_000215 PF06968 Biotin and Thiamin Synthesis associated domain D1605_000220 PF01734 Patatin-like phospholipase D1605_000225 PF01040 UbiA prenyltransferase family D1605_000260 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D1605_000260 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D1605_000265 PF01578 Cytochrome C assembly protein D1605_000270 PF02978 Signal peptide binding domain D1605_000270 PF00448 SRP54-type protein, GTPase domain D1605_000270 PF02881 SRP54-type protein, helical bundle domain D1605_000295 PF00577 Outer membrane usher protein D1605_000295 PF13954 PapC N-terminal domain D1605_000295 PF13953 PapC C-terminal domain D1605_000300 PF02753 Pili assembly chaperone PapD, C-terminal domain D1605_000300 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D1605_000305 PF16970 Type-1 fimbrial protein, A D1605_000310 PF02464 Competence-damaged protein D1605_000315 PF00083 Sugar (and other) transporter D1605_000320 PF13167 GTP-binding GTPase N-terminal D1605_000320 PF01926 50S ribosome-binding GTPase D1605_000320 PF16360 GTP-binding GTPase Middle Region D1605_000325 PF17209 Hfq protein D1605_000335 PF00809 Pterin binding enzyme D1605_000345 PF00004 ATPase family associated with various cellular activities (AAA) D1605_000345 PF17862 AAA+ lid domain D1605_000345 PF06480 FtsH Extracellular D1605_000345 PF01434 Peptidase family M41 D1605_000350 PF01728 FtsJ-like methyltransferase D1605_000355 PF01985 CRS1 / YhbY (CRM) domain D1605_000365 PF00920 Dehydratase family D1605_000385 PF03279 Bacterial lipid A biosynthesis acyltransferase D1605_000390 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D1605_000400 PF00886 Ribosomal protein S16 D1605_000405 PF05239 PRC-barrel domain D1605_000405 PF01782 RimM N-terminal domain D1605_000410 PF01746 tRNA (Guanine-1)-methyltransferase D1605_000415 PF01245 Ribosomal protein L19 D1605_000420 PF00557 Metallopeptidase family M24 D1605_000425 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D1605_000425 PF14602 Hexapeptide repeat of succinyl-transferase D1605_000425 PF00132 Bacterial transferase hexapeptide (six repeats) D1605_000430 PF03960 ArsC family D1605_000435 PF07687 Peptidase dimerisation domain D1605_000435 PF01546 Peptidase family M20/M25/M40 D1605_000440 PF00733 Asparagine synthase D1605_000440 PF13537 Glutamine amidotransferase domain D1605_000450 PF03060 Nitronate monooxygenase D1605_000455 PF00717 Peptidase S24-like D1605_000455 PF01726 LexA DNA binding domain D1605_000460 PF00154 recA bacterial DNA recombination protein D1605_000465 PF02272 DHHA1 domain D1605_000465 PF01411 tRNA synthetases class II (A) D1605_000465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1605_000470 PF02599 Global regulator protein family D1605_000480 PF01432 Peptidase family M3 D1605_000495 PF07731 Multicopper oxidase D1605_000495 PF00394 Multicopper oxidase D1605_000495 PF07732 Multicopper oxidase D1605_000500 PF05275 Copper resistance protein B precursor (CopB) D1605_000505 PF08264 Anticodon-binding domain of tRNA D1605_000505 PF10458 Valyl tRNA synthetase tRNA binding arm D1605_000505 PF00133 tRNA synthetases class I (I, L, M and V) D1605_000525 PF00883 Cytosol aminopeptidase family, catalytic domain D1605_000525 PF02789 Cytosol aminopeptidase family, N-terminal domain D1605_000530 PF03739 Lipopolysaccharide export system permease LptF/LptG D1605_000545 PF01380 SIS domain D1605_000555 PF17284 Spermidine synthase tetramerisation domain D1605_000560 PF17810 Arginine decarboxylase helical bundle domain D1605_000560 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D1605_000560 PF17944 Arginine decarboxylase C-terminal helical extension D1605_000565 PF00106 short chain dehydrogenase D1605_000575 PF00750 tRNA synthetases class I (R) D1605_000575 PF05746 DALR anticodon binding domain D1605_000575 PF03485 Arginyl tRNA synthetase N terminal domain D1605_000580 PF04002 RadC-like JAB domain D1605_000585 PF04127 DNA / pantothenate metabolism flavoprotein D1605_000585 PF02441 Flavoprotein D1605_000590 PF00692 dUTPase D1605_000605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1605_000605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1605_000605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1605_000605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1605_000615 PF00156 Phosphoribosyl transferase domain D1605_000660 PF07690 Major Facilitator Superfamily D1605_000665 PF03702 Anhydro-N-acetylmuramic acid kinase D1605_000670 PF01551 Peptidase family M23 D1605_000670 PF04225 Opacity-associated protein A LysM-like domain D1605_000675 PF00579 tRNA synthetases class I (W and Y) D1605_000705 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D1605_000705 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D1605_000710 PF01578 Cytochrome C assembly protein D1605_000725 PF16658 Class II release factor RF3, C-terminal domain D1605_000725 PF00009 Elongation factor Tu GTP binding domain D1605_000730 PF03006 Haemolysin-III related D1605_000735 PF00535 Glycosyl transferase family 2 D1605_000740 PF01026 TatD related DNase D1605_000755 PF01597 Glycine cleavage H-protein D1605_000760 PF08669 Glycine cleavage T-protein C-terminal barrel domain D1605_000760 PF01571 Aminomethyltransferase folate-binding domain D1605_000770 PF01145 SPFH domain / Band 7 family D1605_000770 PF16200 C-terminal region of band_7 D1605_000775 PF03819 MazG nucleotide pyrophosphohydrolase domain D1605_000780 PF00459 Inositol monophosphatase family D1605_000785 PF00293 NUDIX domain D1605_000790 PF00202 Aminotransferase class-III D1605_000795 PF04452 RNA methyltransferase D1605_000800 PF00271 Helicase conserved C-terminal domain D1605_000800 PF00270 DEAD/DEAH box helicase D1605_000805 PF01242 6-pyruvoyl tetrahydropterin synthase D1605_000830 PF03653 Uncharacterised protein family (UPF0093) D1605_000835 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D1605_000840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D1605_000840 PF07733 Bacterial DNA polymerase III alpha NTPase domain D1605_000840 PF14579 Helix-hairpin-helix motif D1605_000840 PF02811 PHP domain D1605_000840 PF01336 OB-fold nucleic acid binding domain D1605_000845 PF01259 SAICAR synthetase D1605_000850 PF00226 DnaJ domain D1605_000850 PF00684 DnaJ central domain D1605_000850 PF01556 DnaJ C terminal domain D1605_000855 PF00834 Ribulose-phosphate 3 epimerase family D1605_000860 PF04715 Anthranilate synthase component I, N terminal region D1605_000860 PF00425 chorismate binding enzyme D1605_000865 PF00117 Glutamine amidotransferase class-I D1605_000870 PF02885 Glycosyl transferase family, helical bundle domain D1605_000870 PF00591 Glycosyl transferase family, a/b domain D1605_000875 PF00218 Indole-3-glycerol phosphate synthase D1605_000900 PF00557 Metallopeptidase family M24 D1605_000900 PF01321 Creatinase/Prolidase N-terminal domain D1605_000915 PF01702 Queuine tRNA-ribosyltransferase D1605_000920 PF02699 Preprotein translocase subunit D1605_000925 PF13721 SecD export protein N-terminal TM region D1605_000925 PF02355 Protein export membrane protein D1605_000925 PF07549 SecD/SecF GG Motif D1605_000930 PF07549 SecD/SecF GG Motif D1605_000930 PF02355 Protein export membrane protein D1605_000940 PF12626 Polymerase A arginine-rich C-terminus D1605_000940 PF12627 Probable RNA and SrmB- binding site of polymerase A D1605_000940 PF01743 Poly A polymerase head domain D1605_000945 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D1605_000950 PF02548 Ketopantoate hydroxymethyltransferase D1605_000955 PF02569 Pantoate-beta-alanine ligase D1605_000960 PF02261 Aspartate decarboxylase D1605_000965 PF00342 Phosphoglucose isomerase D1605_000975 PF17384 RimP C-terminal SH3 domain D1605_000975 PF02576 RimP N-terminal domain D1605_000980 PF08529 NusA N-terminal domain D1605_000980 PF13184 NusA-like KH domain D1605_000980 PF00575 S1 RNA binding domain D1605_000985 PF04760 Translation initiation factor IF-2, N-terminal region D1605_000985 PF08364 Bacterial translation initiation factor IF-2 associated region D1605_000985 PF11987 Translation-initiation factor 2 D1605_000985 PF00009 Elongation factor Tu GTP binding domain D1605_000990 PF02033 Ribosome-binding factor A D1605_000995 PF16198 tRNA pseudouridylate synthase B C-terminal domain D1605_000995 PF01509 TruB family pseudouridylate synthase (N terminal domain) D1605_000995 PF09157 Pseudouridine synthase II TruB, C-terminal D1605_001000 PF00312 Ribosomal protein S15 D1605_001005 PF03725 3' exoribonuclease family, domain 2 D1605_001005 PF00575 S1 RNA binding domain D1605_001005 PF00013 KH domain D1605_001005 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D1605_001005 PF01138 3' exoribonuclease family, domain 1 D1605_001010 PF01638 HxlR-like helix-turn-helix D1605_001015 PF05368 NmrA-like family D1605_001025 PF00873 AcrB/AcrD/AcrF family D1605_001050 PF00270 DEAD/DEAH box helicase D1605_001050 PF03880 DbpA RNA binding domain D1605_001050 PF00271 Helicase conserved C-terminal domain D1605_001060 PF00766 Electron transfer flavoprotein FAD-binding domain D1605_001060 PF01012 Electron transfer flavoprotein domain D1605_001065 PF01012 Electron transfer flavoprotein domain D1605_001070 PF16363 GDP-mannose 4,6 dehydratase D1605_001075 PF00483 Nucleotidyl transferase D1605_001080 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D1605_001085 PF04321 RmlD substrate binding domain D1605_001090 PF01050 Mannose-6-phosphate isomerase D1605_001090 PF00483 Nucleotidyl transferase D1605_001095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1605_001095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1605_001095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1605_001095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1605_001120 PF00082 Subtilase family D1605_001120 PF12951 Passenger-associated-transport-repeat D1605_001120 PF03797 Autotransporter beta-domain D1605_001130 PF06779 Uncharacterised MFS-type transporter YbfB D1605_001140 PF00365 Phosphofructokinase D1605_001150 PF08245 Mur ligase middle domain D1605_001150 PF02875 Mur ligase family, glutamate ligase domain D1605_001150 PF01225 Mur ligase family, catalytic domain D1605_001155 PF01569 PAP2 superfamily D1605_001165 PF02789 Cytosol aminopeptidase family, N-terminal domain D1605_001165 PF00883 Cytosol aminopeptidase family, catalytic domain D1605_001170 PF01594 AI-2E family transporter D1605_001190 PF00595 PDZ domain D1605_001195 PF08338 Domain of unknown function (DUF1731) D1605_001195 PF01370 NAD dependent epimerase/dehydratase family D1605_001200 PF13193 AMP-binding enzyme C-terminal domain D1605_001200 PF00501 AMP-binding enzyme D1605_001205 PF00330 Aconitase family (aconitate hydratase) D1605_001205 PF00694 Aconitase C-terminal domain D1605_001220 PF11791 Aconitate B N-terminal domain D1605_001220 PF00330 Aconitase family (aconitate hydratase) D1605_001220 PF06434 Aconitate hydratase 2 N-terminus D1605_001265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1605_001275 PF00121 Triosephosphate isomerase D1605_001290 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D1605_001295 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D1605_001300 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D1605_001305 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D1605_001315 PF10531 SLBB domain D1605_001315 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D1605_001315 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D1605_001320 PF00384 Molybdopterin oxidoreductase D1605_001320 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D1605_001320 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal D1605_001325 PF00146 NADH dehydrogenase D1605_001330 PF12838 4Fe-4S dicluster domain D1605_001335 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D1605_001340 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D1605_001345 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D1605_001345 PF00361 Proton-conducting membrane transporter D1605_001350 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus D1605_001350 PF00361 Proton-conducting membrane transporter D1605_001355 PF00361 Proton-conducting membrane transporter D1605_001360 PF00106 short chain dehydrogenase D1605_001365 PF03600 Citrate transporter D1605_001375 PF00072 Response regulator receiver domain D1605_001375 PF00486 Transcriptional regulatory protein, C terminal D1605_001380 PF08521 Two-component sensor kinase N-terminal D1605_001380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_001380 PF00512 His Kinase A (phospho-acceptor) domain D1605_001395 PF00072 Response regulator receiver domain D1605_001395 PF00196 Bacterial regulatory proteins, luxR family D1605_001400 PF09456 RcsC Alpha-Beta-Loop (ABL) D1605_001400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_001400 PF00512 His Kinase A (phospho-acceptor) domain D1605_001400 PF00072 Response regulator receiver domain D1605_001415 PF00375 Sodium:dicarboxylate symporter family D1605_001420 PF01515 Phosphate acetyl/butaryl transferase D1605_001420 PF03949 Malic enzyme, NAD binding domain D1605_001420 PF00390 Malic enzyme, N-terminal domain D1605_001425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_001425 PF00183 Hsp90 protein D1605_001435 PF01467 Cytidylyltransferase-like D1605_001450 PF00037 4Fe-4S binding domain D1605_001460 PF00990 Diguanylate cyclase, GGDEF domain D1605_001465 PF08460 Bacterial SH3 domain D1605_001465 PF01551 Peptidase family M23 D1605_001470 PF01979 Amidohydrolase family D1605_001475 PF01809 Putative membrane protein insertion efficiency factor D1605_001480 PF01258 Prokaryotic dksA/traR C4-type zinc finger D1605_001490 PF05977 Transmembrane secretion effector D1605_001495 PF02657 Fe-S metabolism associated domain D1605_001500 PF01406 tRNA synthetases class I (C) catalytic domain D1605_001500 PF09190 DALR domain D1605_001515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D1605_001515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D1605_001520 PF00764 Arginosuccinate synthase D1605_001525 PF07687 Peptidase dimerisation domain D1605_001525 PF01546 Peptidase family M20/M25/M40 D1605_001530 PF00696 Amino acid kinase family D1605_001530 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase D1605_001535 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1605_001540 PF00206 Lyase D1605_001545 PF00696 Amino acid kinase family D1605_001545 PF01472 PUA domain D1605_001550 PF00171 Aldehyde dehydrogenase family D1605_001595 PF14437 MafB19-like deaminase D1605_001600 PF01325 Iron dependent repressor, N-terminal DNA binding domain D1605_001600 PF02742 Iron dependent repressor, metal binding and dimerisation domain D1605_001605 PF01566 Natural resistance-associated macrophage protein D1605_001610 PF04376 Arginine-tRNA-protein transferase, N terminus D1605_001610 PF04377 Arginine-tRNA-protein transferase, C terminus D1605_001630 PF00082 Subtilase family D1605_001630 PF12951 Passenger-associated-transport-repeat D1605_001630 PF03797 Autotransporter beta-domain D1605_001650 PF01553 Acyltransferase D1605_001670 PF05221 S-adenosyl-L-homocysteine hydrolase D1605_001670 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D1605_001680 PF01351 Ribonuclease HII D1605_001685 PF02684 Lipid-A-disaccharide synthetase D1605_001690 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D1605_001690 PF00132 Bacterial transferase hexapeptide (six repeats) D1605_001695 PF07977 FabA-like domain D1605_001700 PF00132 Bacterial transferase hexapeptide (six repeats) D1605_001700 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D1605_001705 PF07244 Surface antigen variable number repeat D1605_001705 PF01103 Surface antigen D1605_001710 PF17820 PDZ domain D1605_001710 PF02163 Peptidase family M50 D1605_001715 PF13288 DXP reductoisomerase C-terminal domain D1605_001715 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D1605_001715 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D1605_001725 PF01255 Putative undecaprenyl diphosphate synthase D1605_001730 PF01765 Ribosome recycling factor D1605_001735 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D1605_001760 PF00696 Amino acid kinase family D1605_001790 PF01081 KDPG and KHG aldolase D1605_001795 PF00920 Dehydratase family D1605_001800 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1605_001805 PF02685 Glucokinase D1605_001810 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D1605_001810 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D1605_001815 PF17912 MalK OB fold domain D1605_001815 PF00005 ABC transporter D1605_001820 PF01571 Aminomethyltransferase folate-binding domain D1605_001830 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D1605_001835 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D1605_001840 PF00890 FAD binding domain D1605_001840 PF02910 Fumarate reductase flavoprotein C-term D1605_001845 PF13085 2Fe-2S iron-sulfur cluster binding domain D1605_001850 PF03937 Flavinator of succinate dehydrogenase D1605_001860 PF02687 FtsX-like permease family D1605_001860 PF12704 MacB-like periplasmic core domain D1605_001865 PF00005 ABC transporter D1605_001870 PF00753 Metallo-beta-lactamase superfamily D1605_001870 PF03772 Competence protein D1605_001875 PF01618 MotA/TolQ/ExbB proton channel family D1605_001885 PF00664 ABC transporter transmembrane region D1605_001885 PF00005 ABC transporter D1605_001890 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D1605_001925 PF01381 Helix-turn-helix D1605_001930 PF15723 Motility quorum-sensing regulator, toxin of MqsA D1605_001935 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA D1605_002000 PF00589 Phage integrase family D1605_002000 PF02899 Phage integrase, N-terminal SAM-like domain D1605_002015 PF04264 YceI-like domain D1605_002020 PF13091 PLD-like domain D1605_002035 PF03358 NADPH-dependent FMN reductase D1605_002040 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D1605_002040 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D1605_002060 PF01367 5'-3' exonuclease, C-terminal SAM fold D1605_002060 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D1605_002060 PF00476 DNA polymerase family A D1605_002060 PF01612 3'-5' exonuclease D1605_002065 PF01113 Dihydrodipicolinate reductase, N-terminus D1605_002065 PF05173 Dihydrodipicolinate reductase, C-terminus D1605_002070 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D1605_002070 PF00117 Glutamine amidotransferase class-I D1605_002075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1605_002075 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D1605_002075 PF02142 MGS-like domain D1605_002080 PF03449 Transcription elongation factor, N-terminal D1605_002080 PF01272 Transcription elongation factor, GreA/GreB, C-term D1605_002090 PF17768 RecJ OB domain D1605_002090 PF02272 DHHA1 domain D1605_002090 PF01368 DHH family D1605_002100 PF01336 OB-fold nucleic acid binding domain D1605_002100 PF00152 tRNA synthetases class II (D, K and N) D1605_002105 PF00072 Response regulator receiver domain D1605_002110 PF00072 Response regulator receiver domain D1605_002110 PF01627 Hpt domain D1605_002110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_002110 PF00512 His Kinase A (phospho-acceptor) domain D1605_002115 PF00378 Enoyl-CoA hydratase/isomerase D1605_002120 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D1605_002120 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D1605_002130 PF08245 Mur ligase middle domain D1605_002140 PF00293 NUDIX domain D1605_002145 PF02219 Methylenetetrahydrofolate reductase D1605_002155 PF02545 Maf-like protein D1605_002160 PF00575 S1 RNA binding domain D1605_002160 PF10150 Ribonuclease E/G family D1605_002170 PF01523 Putative modulator of DNA gyrase D1605_002175 PF04751 Protein of unknown function (DUF615) D1605_002180 PF01523 Putative modulator of DNA gyrase D1605_002185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1605_002185 PF03466 LysR substrate binding domain D1605_002200 PF08240 Alcohol dehydrogenase GroES-like domain D1605_002200 PF00107 Zinc-binding dehydrogenase D1605_002210 PF14602 Hexapeptide repeat of succinyl-transferase D1605_002210 PF00132 Bacterial transferase hexapeptide (six repeats) D1605_002210 PF12804 MobA-like NTP transferase domain D1605_002220 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D1605_002220 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D1605_002225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1605_002225 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1605_002230 PF00231 ATP synthase D1605_002235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1605_002235 PF00306 ATP synthase alpha/beta chain, C terminal domain D1605_002235 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1605_002240 PF00213 ATP synthase delta (OSCP) subunit D1605_002245 PF00430 ATP synthase B/B' CF(0) D1605_002250 PF00137 ATP synthase subunit C D1605_002255 PF00119 ATP synthase A chain D1605_002270 PF00338 Ribosomal protein S10p/S20e D1605_002275 PF00297 Ribosomal protein L3 D1605_002280 PF00573 Ribosomal protein L4/L1 family D1605_002285 PF00276 Ribosomal protein L23 D1605_002290 PF00181 Ribosomal Proteins L2, RNA binding domain D1605_002290 PF03947 Ribosomal Proteins L2, C-terminal domain D1605_002295 PF00203 Ribosomal protein S19 D1605_002300 PF00237 Ribosomal protein L22p/L17e D1605_002305 PF00189 Ribosomal protein S3, C-terminal domain D1605_002305 PF07650 KH domain D1605_002310 PF00252 Ribosomal protein L16p/L10e D1605_002315 PF00831 Ribosomal L29 protein D1605_002320 PF00366 Ribosomal protein S17 D1605_002325 PF00238 Ribosomal protein L14p/L23e D1605_002330 PF00467 KOW motif D1605_002330 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D1605_002335 PF00281 Ribosomal protein L5 D1605_002335 PF00673 ribosomal L5P family C-terminus D1605_002340 PF00253 Ribosomal protein S14p/S29e D1605_002345 PF00410 Ribosomal protein S8 D1605_002350 PF00347 Ribosomal protein L6 D1605_002355 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D1605_002360 PF00333 Ribosomal protein S5, N-terminal domain D1605_002360 PF03719 Ribosomal protein S5, C-terminal domain D1605_002365 PF00327 Ribosomal protein L30p/L7e D1605_002370 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D1605_002375 PF00344 SecY translocase D1605_002380 PF00416 Ribosomal protein S13/S18 D1605_002385 PF00411 Ribosomal protein S11 D1605_002390 PF00163 Ribosomal protein S4/S9 N-terminal domain D1605_002390 PF01479 S4 domain D1605_002395 PF01000 RNA polymerase Rpb3/RpoA insert domain D1605_002395 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D1605_002395 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D1605_002400 PF01196 Ribosomal protein L17 D1605_002405 PF04380 Membrane fusogenic activity D1605_002410 PF13335 Magnesium chelatase, subunit ChlI C-terminal D1605_002410 PF01078 Magnesium chelatase, subunit ChlI D1605_002420 PF00561 alpha/beta hydrolase fold D1605_002425 PF03280 Proteobacterial lipase chaperone protein D1605_002435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D1605_002435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D1605_002435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D1605_002450 PF05697 Bacterial trigger factor protein (TF) D1605_002450 PF05698 Bacterial trigger factor protein (TF) C-terminus D1605_002455 PF00574 Clp protease D1605_002460 PF10431 C-terminal, D2-small domain, of ClpB protein D1605_002460 PF07724 AAA domain (Cdc48 subfamily) D1605_002460 PF06689 ClpX C4-type zinc finger D1605_002465 PF00004 ATPase family associated with various cellular activities (AAA) D1605_002465 PF05362 Lon protease (S16) C-terminal proteolytic domain D1605_002465 PF02190 ATP-dependent protease La (LON) substrate-binding domain D1605_002470 PF00216 Bacterial DNA-binding protein D1605_002495 PF03477 ATP cone domain D1605_002495 PF02867 Ribonucleotide reductase, barrel domain D1605_002495 PF00317 Ribonucleotide reductase, all-alpha domain D1605_002500 PF00268 Ribonucleotide reductase, small chain D1605_002515 PF01479 S4 domain D1605_002515 PF00849 RNA pseudouridylate synthase D1605_002520 PF13419 Haloacid dehalogenase-like hydrolase D1605_002535 PF00830 Ribosomal L28 family D1605_002540 PF00471 Ribosomal protein L33 D1605_002545 PF13091 PLD-like domain D1605_002545 PF13396 Phospholipase_D-nuclease N-terminal D1605_002550 PF00043 Glutathione S-transferase, C-terminal domain D1605_002550 PF02798 Glutathione S-transferase, N-terminal domain D1605_002555 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D1605_002555 PF00056 lactate/malate dehydrogenase, NAD binding domain D1605_002560 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1605_002565 PF00679 Elongation factor G C-terminus D1605_002565 PF00009 Elongation factor Tu GTP binding domain D1605_002565 PF03144 Elongation factor Tu domain 2 D1605_002575 PF00529 HlyD membrane-fusion protein of T1SS D1605_002575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1605_002600 PF00664 ABC transporter transmembrane region D1605_002600 PF03412 Peptidase C39 family D1605_002600 PF00005 ABC transporter D1605_002605 PF01061 ABC-2 type transporter D1605_002610 PF00005 ABC transporter D1605_002615 PF05567 Neisseria PilC beta-propeller domain D1605_002635 PF08482 ATP-dependent helicase C-terminal D1605_002635 PF00271 Helicase conserved C-terminal domain D1605_002635 PF04408 Helicase associated domain (HA2) D1605_002635 PF00270 DEAD/DEAH box helicase D1605_002645 PF13185 GAF domain D1605_002650 PF17243 POTRA domain TamA domain 1 D1605_002650 PF01103 Surface antigen D1605_002655 PF04357 TamB, inner membrane protein subunit of TAM complex D1605_002665 PF00589 Phage integrase family D1605_002795 PF04303 PrpF protein D1605_002825 PF11974 Bacterial alpha-2-macroglobulin MG3 domain D1605_002825 PF00207 Alpha-2-macroglobulin family D1605_002825 PF07703 Alpha-2-macroglobulin bait region domain D1605_002825 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain D1605_002825 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain D1605_002825 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain D1605_002825 PF17962 Bacterial macroglobulin domain 6 D1605_002825 PF01835 MG2 domain D1605_002830 PF07859 alpha/beta hydrolase fold D1605_002835 PF12833 Helix-turn-helix domain D1605_002835 PF12852 Cupin D1605_002845 PF00929 Exonuclease D1605_002850 PF05552 Conserved TM helix D1605_002850 PF00924 Mechanosensitive ion channel D1605_002855 PF00391 PEP-utilising enzyme, mobile domain D1605_002855 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D1605_002855 PF02896 PEP-utilising enzyme, TIM barrel domain D1605_002860 PF03618 Kinase/pyrophosphorylase D1605_002880 PF00553 Cellulose binding domain D1605_002880 PF01341 Glycosyl hydrolases family 6 D1605_002880 PF00041 Fibronectin type III domain D1605_002885 PF04055 Radical SAM superfamily D1605_002885 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D1605_002890 PF03099 Biotin/lipoate A/B protein ligase family D1605_002895 PF04359 Protein of unknown function (DUF493) D1605_002915 PF04286 Protein of unknown function (DUF445) D1605_002920 PF03471 Transporter associated domain D1605_002920 PF00571 CBS domain D1605_002920 PF01595 Cyclin M transmembrane N-terminal domain D1605_002935 PF00204 DNA gyrase B D1605_002935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_002935 PF01751 Toprim domain D1605_002935 PF00986 DNA gyrase B subunit, carboxyl terminus D1605_002945 PF06418 CTP synthase N-terminus D1605_002945 PF00117 Glutamine amidotransferase class-I D1605_002950 PF00793 DAHP synthetase I family D1605_002955 PF03952 Enolase, N-terminal domain D1605_002955 PF00113 Enolase, C-terminal TIM barrel domain D1605_002960 PF04977 Septum formation initiator D1605_002965 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D1605_002970 PF02542 YgbB family D1605_002975 PF01713 Smr domain D1605_003000 PF02470 MlaD protein D1605_003000 PF03886 ABC-type transport auxiliary lipoprotein component D1605_003005 PF00005 ABC transporter D1605_003010 PF02405 Permease MlaE D1605_003050 PF04085 rod shape-determining protein MreC D1605_003055 PF04093 rod shape-determining protein MreD D1605_003060 PF03717 Penicillin-binding Protein dimerisation domain D1605_003060 PF00905 Penicillin binding protein transpeptidase domain D1605_003065 PF01098 Cell cycle protein D1605_003070 PF02547 Queuosine biosynthesis protein D1605_003075 PF13291 ACT domain D1605_003075 PF02824 TGS domain D1605_003075 PF04607 Region found in RelA / SpoT proteins D1605_003090 PF03776 Septum formation topological specificity factor MinE D1605_003095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D1605_003100 PF03775 Septum formation inhibitor MinC, C-terminal domain D1605_003100 PF05209 Septum formation inhibitor MinC, N-terminal domain D1605_003115 PF00730 HhH-GPD superfamily base excision DNA repair protein D1605_003130 PF04264 YceI-like domain D1605_003135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_003135 PF00512 His Kinase A (phospho-acceptor) domain D1605_003135 PF01627 Hpt domain D1605_003135 PF00672 HAMP domain D1605_003135 PF17149 Periplasmic sensor domain found in signal transduction proteins D1605_003135 PF00072 Response regulator receiver domain D1605_003140 PF00145 C-5 cytosine-specific DNA methylase D1605_003155 PF01208 Uroporphyrinogen decarboxylase (URO-D) D1605_003160 PF01761 3-dehydroquinate synthase D1605_003165 PF01202 Shikimate kinase D1605_003170 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D1605_003170 PF01243 Pyridoxamine 5'-phosphate oxidase D1605_003175 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D1605_003175 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1605_003185 PF03932 CutC family D1605_003200 PF00528 Binding-protein-dependent transport system inner membrane component D1605_003205 PF00528 Binding-protein-dependent transport system inner membrane component D1605_003210 PF12857 TOBE-like domain D1605_003210 PF00005 ABC transporter D1605_003220 PF03979 Sigma-70 factor, region 1.1 D1605_003220 PF04546 Sigma-70, non-essential region D1605_003220 PF04545 Sigma-70, region 4 D1605_003220 PF04539 Sigma-70 region 3 D1605_003220 PF04542 Sigma-70 region 2 D1605_003220 PF00140 Sigma-70 factor, region 1.2 D1605_003225 PF03989 DNA gyrase C-terminal domain, beta-propeller D1605_003225 PF00521 DNA gyrase/topoisomerase IV, subunit A D1605_003230 PF01047 MarR family D1605_003240 PF12697 Alpha/beta hydrolase family D1605_003245 PF00155 Aminotransferase class I and II D1605_003255 PF01040 UbiA prenyltransferase family D1605_003265 PF01743 Poly A polymerase head domain D1605_003265 PF12627 Probable RNA and SrmB- binding site of polymerase A D1605_003265 PF01966 HD domain D1605_003270 PF01464 Transglycosylase SLT domain D1605_003270 PF14718 Soluble lytic murein transglycosylase L domain D1605_003275 PF02666 Phosphatidylserine decarboxylase D1605_003280 PF02630 SCO1/SenC D1605_003285 PF05175 Methyltransferase small domain D1605_003290 PF01264 Chorismate synthase D1605_003300 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1605_003300 PF02774 Semialdehyde dehydrogenase, dimerisation domain D1605_003310 PF01416 tRNA pseudouridine synthase D1605_003315 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D1605_003320 PF00291 Pyridoxal-phosphate dependent enzyme D1605_003325 PF00290 Tryptophan synthase alpha chain D1605_003330 PF18073 Rubredoxin metal binding domain D1605_003335 PF00296 Luciferase-like monooxygenase D1605_003345 PF16124 RecQ zinc-binding D1605_003345 PF00570 HRDC domain D1605_003345 PF09382 RQC domain D1605_003345 PF00270 DEAD/DEAH box helicase D1605_003345 PF00271 Helicase conserved C-terminal domain D1605_003350 PF00210 Ferritin-like domain D1605_003355 PF11898 Domain of unknown function (DUF3418) D1605_003355 PF00270 DEAD/DEAH box helicase D1605_003355 PF04408 Helicase associated domain (HA2) D1605_003355 PF00271 Helicase conserved C-terminal domain D1605_003355 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D1605_003360 PF02347 Glycine cleavage system P-protein D1605_003365 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D1605_003370 PF00510 Cytochrome c oxidase subunit III D1605_003375 PF00115 Cytochrome C and Quinol oxidase polypeptide I D1605_003380 PF06481 COX Aromatic Rich Motif D1605_003380 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D1605_003385 PF00348 Polyprenyl synthetase D1605_003390 PF00436 Single-strand binding protein family D1605_003410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1605_003420 PF05524 PEP-utilising enzyme, N-terminal D1605_003420 PF00391 PEP-utilising enzyme, mobile domain D1605_003420 PF02896 PEP-utilising enzyme, TIM barrel domain D1605_003425 PF00381 PTS HPr component phosphorylation site D1605_003435 PF03668 P-loop ATPase protein family D1605_003440 PF07475 HPr Serine kinase C-terminal domain D1605_003440 PF02603 HPr Serine kinase N terminus D1605_003445 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D1605_003450 PF04552 Sigma-54, DNA binding domain D1605_003450 PF00309 Sigma-54 factor, Activator interacting domain (AID) D1605_003450 PF04963 Sigma-54 factor, core binding domain D1605_003455 PF00005 ABC transporter D1605_003455 PF12399 Branched-chain amino acid ATP-binding cassette transporter D1605_003475 PF01380 SIS domain D1605_003475 PF00571 CBS domain D1605_003480 PF01722 BolA-like protein D1605_003485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1605_003515 PF02769 AIR synthase related protein, C-terminal domain D1605_003515 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D1605_003515 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D1605_003520 PF13098 Thioredoxin-like domain D1605_003520 PF10411 Disulfide bond isomerase protein N-terminus D1605_003525 PF02899 Phage integrase, N-terminal SAM-like domain D1605_003525 PF00589 Phage integrase family D1605_003530 PF00520 Ion transport protein D1605_003530 PF00027 Cyclic nucleotide-binding domain D1605_003535 PF00202 Aminotransferase class-III D1605_003540 PF04107 Glutamate-cysteine ligase family 2(GCS2) D1605_003545 PF01926 50S ribosome-binding GTPase D1605_003560 PF01323 DSBA-like thioredoxin domain D1605_003565 PF01323 DSBA-like thioredoxin domain D1605_003575 PF04356 Protein of unknown function (DUF489) D1605_003585 PF00293 NUDIX domain D1605_003590 PF02617 ATP-dependent Clp protease adaptor protein ClpS D1605_003595 PF10431 C-terminal, D2-small domain, of ClpB protein D1605_003595 PF07724 AAA domain (Cdc48 subfamily) D1605_003595 PF00004 ATPase family associated with various cellular activities (AAA) D1605_003595 PF02861 Clp amino terminal domain, pathogenicity island component D1605_003595 PF17871 AAA lid domain D1605_003600 PF01176 Translation initiation factor 1A / IF-1 D1605_003605 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D1605_003615 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1605_003620 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D1605_003620 PF01580 FtsK/SpoIIIE family D1605_003620 PF09397 Ftsk gamma domain D1605_003620 PF17854 FtsK alpha domain D1605_003630 PF03548 Outer membrane lipoprotein carrier protein LolA D1605_003635 PF16193 AAA C-terminal domain D1605_003635 PF00004 ATPase family associated with various cellular activities (AAA) D1605_003635 PF12002 MgsA AAA+ ATPase C terminal D1605_003640 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1605_003650 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D1605_003670 PF02685 Glucokinase D1605_003680 PF07690 Major Facilitator Superfamily D1605_003685 PF00356 Bacterial regulatory proteins, lacI family D1605_003690 PF01380 SIS domain D1605_003695 PF01979 Amidohydrolase family D1605_003700 PF01039 Carboxyl transferase domain D1605_003700 PF17848 Acetyl-coA carboxylase zinc finger domain D1605_003705 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1605_003705 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1605_003705 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1605_003705 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1605_003710 PF01522 Polysaccharide deacetylase D1605_003715 PF00534 Glycosyl transferases group 1 D1605_003715 PF13439 Glycosyltransferase Family 4 D1605_003725 PF00355 Rieske [2Fe-2S] domain D1605_003730 PF00266 Aminotransferase class-V D1605_003735 PF01458 Uncharacterized protein family (UPF0051) D1605_003740 PF00005 ABC transporter D1605_003745 PF01458 Uncharacterized protein family (UPF0051) D1605_003750 PF02082 Transcriptional regulator D1605_003760 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D1605_003760 PF00326 Prolyl oligopeptidase family D1605_003770 PF01678 Diaminopimelate epimerase D1605_003780 PF00589 Phage integrase family D1605_003780 PF02899 Phage integrase, N-terminal SAM-like domain D1605_003785 PF00227 Proteasome subunit D1605_003790 PF07724 AAA domain (Cdc48 subfamily) D1605_003790 PF10431 C-terminal, D2-small domain, of ClpB protein D1605_003790 PF00004 ATPase family associated with various cellular activities (AAA) D1605_003800 PF01209 ubiE/COQ5 methyltransferase family D1605_003805 PF11838 ERAP1-like C-terminal domain D1605_003805 PF01433 Peptidase family M1 domain D1605_003825 PF13369 Transglutaminase-like superfamily D1605_003845 PF01507 Phosphoadenosine phosphosulfate reductase family D1605_003850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D1605_003850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D1605_003855 PF00667 FAD binding domain D1605_003855 PF00258 Flavodoxin D1605_003855 PF00175 Oxidoreductase NAD-binding domain D1605_003860 PF01507 Phosphoadenosine phosphosulfate reductase family D1605_003865 PF00009 Elongation factor Tu GTP binding domain D1605_003870 PF01192 RNA polymerase Rpb6 D1605_003875 PF00625 Guanylate kinase D1605_003880 PF08340 Domain of unknown function (DUF1732) D1605_003880 PF03755 YicC-like family, N-terminal region D1605_003885 PF01138 3' exoribonuclease family, domain 1 D1605_003885 PF03725 3' exoribonuclease family, domain 2 D1605_003890 PF01725 Ham1 family D1605_003895 PF04055 Radical SAM superfamily D1605_003895 PF06969 HemN C-terminal domain D1605_003910 PF00561 alpha/beta hydrolase fold D1605_003915 PF05175 Methyltransferase small domain D1605_003915 PF17827 PrmC N-terminal domain D1605_003930 PF03895 YadA-like membrane anchor domain D1605_003930 PF05658 Head domain of trimeric autotransporter adhesin D1605_003930 PF05662 Coiled stalk of trimeric autotransporter adhesin D1605_003930 PF13018 Extended Signal Peptide of Type V secretion system D1605_003935 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D1605_003935 PF00437 Type II/IV secretion system protein D1605_003940 PF00482 Type II secretion system (T2SS), protein F D1605_003950 PF08334 Type II secretion system (T2SS), protein G D1605_003955 PF12019 Type II transport protein GspH D1605_003960 PF07963 Prokaryotic N-terminal methylation motif D1605_003970 PF03934 Type II secretion system (T2SS), protein K D1605_003975 PF05137 Fimbrial assembly protein (PilN) D1605_003980 PF10741 Type II secretion system (T2SS), protein M subtype b D1605_003990 PF00263 Bacterial type II and III secretion system protein D1605_003990 PF03958 Bacterial type II/III secretion system short domain D1605_003995 PF13018 Extended Signal Peptide of Type V secretion system D1605_003995 PF05658 Head domain of trimeric autotransporter adhesin D1605_003995 PF03895 YadA-like membrane anchor domain D1605_003995 PF05662 Coiled stalk of trimeric autotransporter adhesin D1605_004000 PF00578 AhpC/TSA family D1605_004000 PF10417 C-terminal domain of 1-Cys peroxiredoxin D1605_004005 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1605_004005 PF13192 Thioredoxin domain D1605_004010 PF03466 LysR substrate binding domain D1605_004010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1605_004015 PF00814 Glycoprotease family D1605_004020 PF01197 Ribosomal protein L31 D1605_004025 PF00285 Citrate synthase, C-terminal domain D1605_004030 PF00380 Ribosomal protein S9/S16 D1605_004035 PF00572 Ribosomal protein L13 D1605_004040 PF03232 Ubiquinone biosynthesis protein COQ7 D1605_004045 PF02675 S-adenosylmethionine decarboxylase D1605_004050 PF00027 Cyclic nucleotide-binding domain D1605_004050 PF00325 Bacterial regulatory proteins, crp family D1605_004075 PF00899 ThiF family D1605_004085 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1605_004085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1605_004095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1605_004095 PF02817 e3 binding domain D1605_004095 PF00364 Biotin-requiring enzyme D1605_004100 PF02779 Transketolase, pyrimidine binding domain D1605_004100 PF16870 2-oxoglutarate dehydrogenase C-terminal D1605_004100 PF00676 Dehydrogenase E1 component D1605_004100 PF16078 2-oxoglutarate dehydrogenase N-terminus D1605_004105 PF08007 Cupin superfamily protein D1605_004110 PF08328 Adenylosuccinate lyase C-terminal D1605_004110 PF00206 Lyase D1605_004115 PF00206 Lyase D1605_004115 PF10415 Fumarase C C-terminus D1605_004120 PF02899 Phage integrase, N-terminal SAM-like domain D1605_004120 PF00589 Phage integrase family D1605_004175 PF01134 Glucose inhibited division protein A D1605_004175 PF13932 GidA associated domain D1605_004180 PF01134 Glucose inhibited division protein A D1605_004180 PF13932 GidA associated domain D1605_004205 PF13649 Methyltransferase domain D1605_004220 PF02649 Type I GTP cyclohydrolase folE2 D1605_004225 PF00132 Bacterial transferase hexapeptide (six repeats) D1605_004230 PF00873 AcrB/AcrD/AcrF family D1605_004235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1605_004235 PF00529 HlyD membrane-fusion protein of T1SS D1605_004240 PF05088 Bacterial NAD-glutamate dehydrogenase D1605_004245 PF01513 ATP-NAD kinase D1605_004260 PF00239 Resolvase, N terminal domain D1605_004260 PF02796 Helix-turn-helix domain of resolvase D1605_004265 PF08401 Domain of unknown function (DUF1738) D1605_004265 PF13362 Toprim domain D1605_004265 PF18818 Metallopeptidase superfamily domain D1605_004270 PF12706 Beta-lactamase superfamily domain D1605_004280 PF00929 Exonuclease D1605_004280 PF08411 Exonuclease C-terminal D1605_004290 PF00999 Sodium/hydrogen exchanger family D1605_004300 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D1605_004310 PF01812 5-formyltetrahydrofolate cyclo-ligase family D1605_004320 PF05164 Cell division protein ZapA D1605_004330 PF03695 Uncharacterised protein family (UPF0149) D1605_004335 PF05195 Aminopeptidase P, N-terminal domain D1605_004335 PF00557 Metallopeptidase family M24 D1605_004340 PF00293 NUDIX domain D1605_004345 PF00881 Nitroreductase family D1605_004375 PF01063 Amino-transferase class IV D1605_004380 PF02954 Bacterial regulatory protein, Fis family D1605_004400 PF00535 Glycosyl transferase family 2 D1605_004410 PF00925 GTP cyclohydrolase II D1605_004415 PF00578 AhpC/TSA family D1605_004425 PF08206 Ribonuclease B OB domain D1605_004425 PF08461 Ribonuclease R winged-helix domain D1605_004425 PF00773 RNB domain D1605_004425 PF00575 S1 RNA binding domain D1605_004425 PF17876 Cold shock domain D1605_004430 PF00588 SpoU rRNA Methylase family D1605_004430 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1605_004435 PF00132 Bacterial transferase hexapeptide (six repeats) D1605_004440 PF01227 GTP cyclohydrolase I D1605_004445 PF03895 YadA-like membrane anchor domain D1605_004445 PF05662 Coiled stalk of trimeric autotransporter adhesin D1605_004445 PF05658 Head domain of trimeric autotransporter adhesin D1605_004450 PF03186 CobD/Cbib protein D1605_004455 PF12805 FUSC-like inner membrane protein yccS D1605_004460 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D1605_004460 PF02843 Phosphoribosylglycinamide synthetase, C domain D1605_004460 PF02844 Phosphoribosylglycinamide synthetase, N domain D1605_004465 PF02142 MGS-like domain D1605_004465 PF01808 AICARFT/IMPCHase bienzyme D1605_004475 PF00588 SpoU rRNA Methylase family D1605_004485 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D1605_004485 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D1605_004490 PF01555 DNA methylase D1605_004490 PF18273 Type III R-M EcoP15I C-terminal domain D1605_004505 PF00561 alpha/beta hydrolase fold D1605_004510 PF03692 Putative zinc- or iron-chelating domain D1605_004515 PF02540 NAD synthase D1605_004515 PF00795 Carbon-nitrogen hydrolase D1605_004520 PF02091 Glycyl-tRNA synthetase alpha subunit D1605_004525 PF02092 Glycyl-tRNA synthetase beta subunit D1605_004525 PF05746 DALR anticodon binding domain D1605_004540 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D1605_004540 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D1605_004545 PF00072 Response regulator receiver domain D1605_004550 PF01584 CheW-like domain D1605_004555 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D1605_004555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1605_004560 PF01584 CheW-like domain D1605_004560 PF02895 Signal transducing histidine kinase, homodimeric domain D1605_004560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_004560 PF01627 Hpt domain D1605_004560 PF00072 Response regulator receiver domain D1605_004575 PF00156 Phosphoribosyl transferase domain D1605_004590 PF02875 Mur ligase family, glutamate ligase domain D1605_004590 PF08245 Mur ligase middle domain D1605_004600 PF01432 Peptidase family M3 D1605_004615 PF01625 Peptide methionine sulfoxide reductase D1605_004620 PF00375 Sodium:dicarboxylate symporter family D1605_004625 PF02779 Transketolase, pyrimidine binding domain D1605_004625 PF02780 Transketolase, C-terminal domain D1605_004625 PF00456 Transketolase, thiamine diphosphate binding domain D1605_004630 PF02527 rRNA small subunit methyltransferase G D1605_004635 PF01648 4'-phosphopantetheinyl transferase superfamily D1605_004645 PF01526 Tn3 transposase DDE domain D1605_004645 PF13700 Domain of unknown function (DUF4158) D1605_004665 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D1605_004665 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D1605_004670 PF02910 Fumarate reductase flavoprotein C-term D1605_004670 PF00890 FAD binding domain D1605_004675 PF02445 Quinolinate synthetase A protein D1605_004680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D1605_004680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D1605_004685 PF01371 Trp repressor protein D1605_004710 PF02885 Glycosyl transferase family, helical bundle domain D1605_004710 PF00591 Glycosyl transferase family, a/b domain D1605_004710 PF00117 Glutamine amidotransferase class-I D1605_004715 PF04715 Anthranilate synthase component I, N terminal region D1605_004715 PF00425 chorismate binding enzyme D1605_004720 PF00425 chorismate binding enzyme D1605_004720 PF04715 Anthranilate synthase component I, N terminal region D1605_004730 PF01026 TatD related DNase D1605_004750 PF00448 SRP54-type protein, GTPase domain D1605_004750 PF02881 SRP54-type protein, helical bundle domain D1605_004755 PF00633 Helix-hairpin-helix motif D1605_004755 PF00730 HhH-GPD superfamily base excision DNA repair protein D1605_004755 PF14815 NUDIX domain D1605_004760 PF04362 Bacterial Fe(2+) trafficking D1605_004770 PF01709 Transcriptional regulator D1605_004775 PF02075 Crossover junction endodeoxyribonuclease RuvC D1605_004780 PF07499 RuvA, C-terminal domain D1605_004780 PF01330 RuvA N terminal domain D1605_004785 PF02705 K+ potassium transporter D1605_004790 PF17864 RuvB AAA lid domain D1605_004790 PF05491 RuvB C-terminal winged helix domain D1605_004790 PF05496 Holliday junction DNA helicase RuvB P-loop domain D1605_004795 PF03061 Thioesterase superfamily D1605_004800 PF01618 MotA/TolQ/ExbB proton channel family D1605_004805 PF02472 Biopolymer transport protein ExbD/TolR D1605_004815 PF07676 WD40-like Beta Propeller Repeat D1605_004815 PF04052 TolB amino-terminal domain D1605_004820 PF00691 OmpA family D1605_004830 PF04055 Radical SAM superfamily D1605_004835 PF00300 Histidine phosphatase superfamily (branch 1) D1605_004840 PF04493 Endonuclease V D1605_004845 PF00854 POT family D1605_004850 PF00255 Glutathione peroxidase D1605_004855 PF00175 Oxidoreductase NAD-binding domain D1605_004855 PF00970 Oxidoreductase FAD-binding domain D1605_004860 PF13667 ThiC-associated domain D1605_004860 PF01964 Radical SAM ThiC family D1605_004865 PF10459 Peptidase S46 D1605_004870 PF00300 Histidine phosphatase superfamily (branch 1) D1605_005080 PF06508 Queuosine biosynthesis protein QueC D1605_005085 PF02938 GAD domain D1605_005085 PF00152 tRNA synthetases class II (D, K and N) D1605_005085 PF01336 OB-fold nucleic acid binding domain D1605_005090 PF05681 Fumarate hydratase (Fumerase) D1605_005090 PF05683 Fumarase C-terminus D1605_005110 PF03797 Autotransporter beta-domain D1605_005110 PF12951 Passenger-associated-transport-repeat D1605_005110 PF00082 Subtilase family D1605_005115 PF07282 Putative transposase DNA-binding domain D1605_005115 PF01385 Probable transposase D1605_005115 PF12323 Helix-turn-helix domain D1605_005170 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D1605_005175 PF09386 Antitoxin ParD D1605_005220 PF10876 Phage tail assemb.y chaperone protein, TAC D1605_005275 PF04233 Phage Mu protein F like protein D1605_005310 PF13018 Extended Signal Peptide of Type V secretion system D1605_005310 PF13332 Hemagglutinin repeat D1605_005310 PF05860 haemagglutination activity domain D1605_005310 PF04829 Pre-toxin domain with VENN motif D1605_005325 PF00589 Phage integrase family D1605_005325 PF13356 Arm DNA-binding domain D1605_005330 PF06381 Protein of unknown function (DUF1073) D1605_005360 PF00959 Phage lysozyme D1605_005395 PF02498 BRO family, N-terminal domain D1605_005395 PF10548 P22AR C-terminal domain D1605_005435 PF02661 Fic/DOC family D1605_005435 PF17841 BID domain of Bartonella effector protein (Bep) D1605_005440 PF18495 Antitoxin VbhA D1605_005475 PF10065 Uncharacterized conserved protein (DUF2303) D1605_005505 PF00436 Single-strand binding protein family D1605_005515 PF02899 Phage integrase, N-terminal SAM-like domain D1605_005515 PF00589 Phage integrase family D1605_005520 PF00989 PAS fold D1605_005520 PF00512 His Kinase A (phospho-acceptor) domain D1605_005520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_005525 PF00158 Sigma-54 interaction domain D1605_005525 PF00072 Response regulator receiver domain D1605_005525 PF02954 Bacterial regulatory protein, Fis family D1605_005540 PF00909 Ammonium Transporter Family D1605_005545 PF00543 Nitrogen regulatory protein P-II D1605_005550 PF03951 Glutamine synthetase, beta-Grasp domain D1605_005550 PF00120 Glutamine synthetase, catalytic domain D1605_005555 PF02673 Bacitracin resistance protein BacA D1605_005560 PF04264 YceI-like domain D1605_005580 PF07055 Enoyl reductase FAD binding domain D1605_005580 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D1605_005580 PF12241 Trans-2-enoyl-CoA reductase catalytic region D1605_005590 PF03109 ABC1 family D1605_005600 PF00551 Formyl transferase D1605_005605 PF07683 Cobalamin synthesis protein cobW C-terminal domain D1605_005605 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1605_005615 PF03969 AFG1-like ATPase D1605_005620 PF02566 OsmC-like protein D1605_005625 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family D1605_005630 PF11818 C-terminal domain of tail specific protease (DUF3340) D1605_005630 PF00595 PDZ domain D1605_005630 PF03572 Peptidase family S41 D1605_005630 PF17804 Tail specific protease N-terminal domain D1605_005635 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D1605_005635 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D1605_005640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1605_005640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1605_005640 PF00205 Thiamine pyrophosphate enzyme, central domain D1605_005650 PF00291 Pyridoxal-phosphate dependent enzyme D1605_005655 PF08502 LeuA allosteric (dimerisation) domain D1605_005655 PF00682 HMGL-like D1605_005660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D1605_005660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D1605_005665 PF01783 Ribosomal L32p protein family D1605_005670 PF02620 Large ribosomal RNA subunit accumulation protein YceD D1605_005680 PF07726 ATPase family associated with various cellular activities (AAA) D1605_005680 PF17863 AAA lid domain D1605_005690 PF11992 Domain of unknown function (DUF3488) D1605_005690 PF13559 Domain of unknown function (DUF4129) D1605_005690 PF01841 Transglutaminase-like superfamily D1605_005700 PF01230 HIT domain D1605_005705 PF13662 Toprim domain D1605_005705 PF02132 RecR protein D1605_005710 PF02575 YbaB/EbfC DNA-binding family D1605_005715 PF12170 DNA polymerase III tau subunit V interacting with alpha D1605_005715 PF12169 DNA polymerase III subunits gamma and tau domain III D1605_005740 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D1605_005740 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D1605_005745 PF02556 Preprotein translocase subunit SecB D1605_005750 PF00581 Rhodanese-like domain D1605_005775 PF02237 Biotin protein ligase C terminal domain D1605_005775 PF08279 HTH domain D1605_005775 PF03099 Biotin/lipoate A/B protein ligase family D1605_005780 PF03309 Type III pantothenate kinase D1605_005805 PF07963 Prokaryotic N-terminal methylation motif D1605_005805 PF00114 Pilin (bacterial filament) D1605_005820 PF01168 Alanine racemase, N-terminal domain D1605_005825 PF00488 MutS domain V D1605_005825 PF05190 MutS family domain IV D1605_005825 PF05192 MutS domain III D1605_005825 PF05188 MutS domain II D1605_005825 PF01624 MutS domain I D1605_005830 PF00912 Transglycosylase D1605_005835 PF01430 Hsp33 protein D1605_005850 PF01042 Endoribonuclease L-PSP D1605_005890 PF17482 Phage tail sheath C-terminal domain D1605_005890 PF04984 Phage tail sheath protein subtilisin-like domain D1605_005915 PF04221 RelB antitoxin D1605_005920 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ D1605_005990 PF00959 Phage lysozyme D1605_006055 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT D1605_006125 PF10548 P22AR C-terminal domain D1605_006125 PF02498 BRO family, N-terminal domain D1605_006155 PF00589 Phage integrase family D1605_006155 PF02899 Phage integrase, N-terminal SAM-like domain D1605_006160 PF03706 Lysylphosphatidylglycerol synthase TM region D1605_006160 PF09924 Uncharacterised conserved protein (DUF2156) D1605_006170 PF00109 Beta-ketoacyl synthase, N-terminal domain D1605_006170 PF02801 Beta-ketoacyl synthase, C-terminal domain D1605_006180 PF00535 Glycosyl transferase family 2 D1605_006195 PF00437 Type II/IV secretion system protein D1605_006200 PF00437 Type II/IV secretion system protein D1605_006215 PF03900 Porphobilinogen deaminase, C-terminal domain D1605_006215 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D1605_006220 PF00072 Response regulator receiver domain D1605_006220 PF04397 LytTr DNA-binding domain D1605_006225 PF06580 Histidine kinase D1605_006225 PF07694 5TMR of 5TMR-LYT D1605_006230 PF02230 Phospholipase/Carboxylesterase D1605_006235 PF13632 Glycosyl transferase family group 2 D1605_006250 PF01209 ubiE/COQ5 methyltransferase family D1605_006275 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D1605_006285 PF00294 pfkB family carbohydrate kinase D1605_006290 PF07690 Major Facilitator Superfamily D1605_006300 PF04102 SlyX D1605_006305 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D1605_006305 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D1605_006305 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D1605_006310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1605_006310 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1605_006315 PF00255 Glutathione peroxidase D1605_006320 PF00005 ABC transporter D1605_006350 PF05973 Phage derived protein Gp49-like (DUF891) D1605_006355 PF01381 Helix-turn-helix D1605_006400 PF10876 Phage tail assemb.y chaperone protein, TAC D1605_006450 PF00589 Phage integrase family D1605_006450 PF02899 Phage integrase, N-terminal SAM-like domain D1605_006455 PF12848 ABC transporter D1605_006455 PF00005 ABC transporter D1605_006460 PF00593 TonB dependent receptor D1605_006460 PF07715 TonB-dependent Receptor Plug Domain D1605_006465 PF01323 DSBA-like thioredoxin domain D1605_006470 PF00593 TonB dependent receptor D1605_006470 PF07715 TonB-dependent Receptor Plug Domain D1605_006475 PF00999 Sodium/hydrogen exchanger family D1605_006475 PF02254 TrkA-N domain D1605_006480 PF12849 PBP superfamily domain D1605_006485 PF00528 Binding-protein-dependent transport system inner membrane component D1605_006490 PF00528 Binding-protein-dependent transport system inner membrane component D1605_006495 PF00005 ABC transporter D1605_006500 PF01895 PhoU domain D1605_006505 PF00929 Exonuclease D1605_006510 PF00398 Ribosomal RNA adenine dimethylase D1605_006515 PF04379 ApaG domain D1605_006520 PF00149 Calcineurin-like phosphoesterase D1605_006540 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1605_006560 PF00929 Exonuclease D1605_006565 PF00075 RNase H D1605_006575 PF16123 Hydroxyacylglutathione hydrolase C-terminus D1605_006575 PF00753 Metallo-beta-lactamase superfamily D1605_006590 PF00575 S1 RNA binding domain D1605_006590 PF09371 Tex-like protein N-terminal domain D1605_006590 PF16921 Tex protein YqgF-like domain D1605_006590 PF17674 HHH domain D1605_006605 PF00719 Inorganic pyrophosphatase D1605_006610 PF00085 Thioredoxin D1605_006620 PF08264 Anticodon-binding domain of tRNA D1605_006620 PF00133 tRNA synthetases class I (I, L, M and V) D1605_006620 PF13603 Leucyl-tRNA synthetase, Domain 2 D1605_006635 PF01467 Cytidylyltransferase-like D1605_006650 PF13406 Transglycosylase SLT domain D1605_006655 PF03330 Lytic transglycolase D1605_006655 PF05036 Sporulation related domain D1605_006710 PF05860 haemagglutination activity domain D1605_006710 PF13332 Hemagglutinin repeat D1605_006710 PF04829 Pre-toxin domain with VENN motif D1605_006710 PF13018 Extended Signal Peptide of Type V secretion system D1605_006740 PF09285 Elongation factor P, C-terminal D1605_006740 PF08207 Elongation factor P (EF-P) KOW-like domain D1605_006740 PF01132 Elongation factor P (EF-P) OB domain D1605_006745 PF02913 FAD linked oxidases, C-terminal domain D1605_006745 PF01565 FAD binding domain D1605_006750 PF01842 ACT domain D1605_006750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1605_006750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1605_006755 PF13520 Amino acid permease D1605_006765 PF00596 Class II Aldolase and Adducin N-terminal domain D1605_006770 PF03079 ARD/ARD' family D1605_006780 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D1605_006780 PF01502 Phosphoribosyl-AMP cyclohydrolase D1605_006785 PF00977 Histidine biosynthesis protein D1605_006790 PF00977 Histidine biosynthesis protein D1605_006795 PF00117 Glutamine amidotransferase class-I D1605_006800 PF00475 Imidazoleglycerol-phosphate dehydratase D1605_006805 PF00155 Aminotransferase class I and II D1605_006810 PF00815 Histidinol dehydrogenase D1605_006815 PF01634 ATP phosphoribosyltransferase D1605_006815 PF08029 HisG, C-terminal domain D1605_006830 PF03129 Anticodon binding domain D1605_006830 PF13393 Histidyl-tRNA synthetase D1605_006835 PF14821 Threonine synthase N terminus D1605_006835 PF00291 Pyridoxal-phosphate dependent enzyme D1605_006840 PF00288 GHMP kinases N terminal domain D1605_006840 PF08544 GHMP kinases C terminal D1605_006845 PF03447 Homoserine dehydrogenase, NAD binding domain D1605_006845 PF01842 ACT domain D1605_006845 PF00742 Homoserine dehydrogenase D1605_006845 PF13840 ACT domain D1605_006845 PF00696 Amino acid kinase family D1605_006850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D1605_006850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D1605_006855 PF03652 Holliday junction resolvase D1605_006860 PF02622 Uncharacterized ACR, COG1678 D1605_006865 PF07943 Penicillin-binding protein 5, C-terminal domain D1605_006865 PF00768 D-alanyl-D-alanine carboxypeptidase D1605_006875 PF00141 Peroxidase D1605_006880 PF01556 DnaJ C terminal domain D1605_006880 PF00226 DnaJ domain D1605_006890 PF00912 Transglycosylase D1605_006890 PF06832 Penicillin-Binding Protein C-terminus Family D1605_006890 PF00905 Penicillin binding protein transpeptidase domain D1605_006900 PF07715 TonB-dependent Receptor Plug Domain D1605_006900 PF00593 TonB dependent receptor D1605_006905 PF04542 Sigma-70 region 2 D1605_006905 PF08281 Sigma-70, region 4 D1605_006915 PF13180 PDZ domain D1605_006920 PF06421 GTP-binding protein LepA C-terminus D1605_006920 PF00679 Elongation factor G C-terminus D1605_006920 PF03144 Elongation factor Tu domain 2 D1605_006920 PF00009 Elongation factor Tu GTP binding domain D1605_006925 PF10502 Signal peptidase, peptidase S26 D1605_006935 PF00035 Double-stranded RNA binding motif D1605_006935 PF14622 Ribonuclease-III-like D1605_006940 PF01926 50S ribosome-binding GTPase D1605_006940 PF07650 KH domain D1605_006945 PF11967 Recombination protein O N terminal D1605_006945 PF02565 Recombination protein O C terminal D1605_006950 PF02780 Transketolase, C-terminal domain D1605_006950 PF02779 Transketolase, pyrimidine binding domain D1605_006950 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D1605_006955 PF00474 Sodium:solute symporter family D1605_006965 PF16177 Acetyl-coenzyme A synthetase N-terminus D1605_006965 PF13193 AMP-binding enzyme C-terminal domain D1605_006965 PF00501 AMP-binding enzyme D1605_006970 PF02659 Putative manganese efflux pump D1605_006980 PF13360 PQQ-like domain D1605_006985 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region D1605_006985 PF07676 WD40-like Beta Propeller Repeat D1605_006985 PF00326 Prolyl oligopeptidase family D1605_006990 PF03169 OPT oligopeptide transporter protein D1605_007000 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D1605_007000 PF01266 FAD dependent oxidoreductase D1605_007005 PF00230 Major intrinsic protein D1605_007010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1605_007010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1605_007020 PF01263 Aldose 1-epimerase D1605_007025 PF01717 Cobalamin-independent synthase, Catalytic domain D1605_007025 PF08267 Cobalamin-independent synthase, N-terminal domain D1605_007030 PF02677 Epoxyqueuosine reductase QueH D1605_007035 PF00857 Isochorismatase family D1605_007040 PF00501 AMP-binding enzyme D1605_007050 PF00535 Glycosyl transferase family 2 D1605_007055 PF01370 NAD dependent epimerase/dehydratase family D1605_007060 PF17762 HTH domain found in ParB protein D1605_007060 PF02195 ParB-like nuclease domain D1605_007065 PF13614 AAA domain D1605_007075 PF02403 Seryl-tRNA synthetase N-terminal domain D1605_007075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1605_007080 PF03544 Gram-negative bacterial TonB protein C-terminal D1605_007110 PF01555 DNA methylase D1605_007120 PF08459 UvrC Helix-hairpin-helix N-terminal D1605_007120 PF02151 UvrB/uvrC motif D1605_007120 PF01541 GIY-YIG catalytic domain D1605_007125 PF01066 CDP-alcohol phosphatidyltransferase D1605_007145 PF00490 Delta-aminolevulinic acid dehydratase D1605_007150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1605_007165 PF00202 Aminotransferase class-III D1605_007170 PF10609 NUBPL iron-transfer P-loop NTPase D1605_007175 PF02348 Cytidylyltransferase D1605_007180 PF01451 Low molecular weight phosphotyrosine protein phosphatase D1605_007185 PF01555 DNA methylase D1605_007280 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1605_007285 PF00800 Prephenate dehydratase D1605_007285 PF01817 Chorismate mutase type II D1605_007285 PF01842 ACT domain D1605_007290 PF00266 Aminotransferase class-V D1605_007300 PF12679 ABC-2 family transporter protein D1605_007305 PF00005 ABC transporter D1605_007315 PF00186 Dihydrofolate reductase D1605_007320 PF00303 Thymidylate synthase D1605_007325 PF01790 Prolipoprotein diacylglyceryl transferase D1605_007330 PF01219 Prokaryotic diacylglycerol kinase D1605_007335 PF00072 Response regulator receiver domain D1605_007335 PF00486 Transcriptional regulatory protein, C terminal D1605_007340 PF02153 Prephenate dehydrogenase D1605_007340 PF01817 Chorismate mutase type II D1605_007345 PF00226 DnaJ domain D1605_007345 PF01556 DnaJ C terminal domain D1605_007345 PF00684 DnaJ central domain D1605_007350 PF00012 Hsp70 protein D1605_007355 PF01025 GrpE D1605_007360 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding D1605_007360 PF01628 HrcA protein C terminal domain D1605_007365 PF13476 AAA domain D1605_007365 PF02463 RecF/RecN/SMC N terminal domain D1605_007370 PF01475 Ferric uptake regulator family D1605_007375 PF04355 SmpA / OmlA family D1605_007380 PF03658 RnfH family Ubiquitin D1605_007390 PF01668 SmpB protein D1605_007400 PF00313 'Cold-shock' DNA-binding domain D1605_007405 PF01048 Phosphorylase superfamily D1605_007410 PF00156 Phosphoribosyl transferase domain D1605_007415 PF00933 Glycosyl hydrolase family 3 N terminal domain D1605_007420 PF01928 CYTH domain D1605_007425 PF05958 tRNA (Uracil-5-)-methyltransferase D1605_007430 PF00072 Response regulator receiver domain D1605_007430 PF00486 Transcriptional regulatory protein, C terminal D1605_007435 PF03808 Glycosyl transferase WecB/TagA/CpsF family D1605_007445 PF14667 Polysaccharide biosynthesis C-terminal domain D1605_007455 PF13439 Glycosyltransferase Family 4 D1605_007455 PF00534 Glycosyl transferases group 1 D1605_007470 PF02397 Bacterial sugar transferase D1605_007485 PF00180 Isocitrate/isopropylmalate dehydrogenase D1605_007490 PF00694 Aconitase C-terminal domain D1605_007495 PF00330 Aconitase family (aconitate hydratase) D1605_007515 PF14489 QueF-like protein D1605_007515 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D1605_007520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1605_007525 PF00873 AcrB/AcrD/AcrF family D1605_007530 PF00873 AcrB/AcrD/AcrF family D1605_007540 PF08240 Alcohol dehydrogenase GroES-like domain D1605_007540 PF00107 Zinc-binding dehydrogenase D1605_007560 PF00462 Glutaredoxin D1605_007565 PF01522 Polysaccharide deacetylase D1605_007570 PF00155 Aminotransferase class I and II D1605_007575 PF03412 Peptidase C39 family D1605_007575 PF00005 ABC transporter D1605_007575 PF00664 ABC transporter transmembrane region D1605_007640 PF06594 Haemolysin-type calcium binding protein related domain D1605_007640 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1605_007650 PF13091 PLD-like domain D1605_007650 PF13087 AAA domain D1605_007685 PF02401 LytB protein D1605_007690 PF01252 Signal peptidase (SPase) II D1605_007695 PF08264 Anticodon-binding domain of tRNA D1605_007695 PF00133 tRNA synthetases class I (I, L, M and V) D1605_007695 PF06827 Zinc finger found in FPG and IleRS D1605_007700 PF01687 Riboflavin kinase D1605_007700 PF06574 FAD synthetase D1605_007705 PF03023 Lipid II flippase MurJ D1605_007710 PF01649 Ribosomal protein S20 D1605_007715 PF01018 GTP1/OBG D1605_007715 PF01926 50S ribosome-binding GTPase D1605_007720 PF01016 Ribosomal L27 protein D1605_007725 PF00829 Ribosomal prokaryotic L21 protein D1605_007730 PF17755 UvrA DNA-binding domain D1605_007730 PF17760 UvrA interaction domain D1605_007730 PF00005 ABC transporter D1605_007745 PF00958 GMP synthase C terminal domain D1605_007745 PF00117 Glutamine amidotransferase class-I D1605_007745 PF02540 NAD synthase D1605_007750 PF00478 IMP dehydrogenase / GMP reductase domain D1605_007750 PF00571 CBS domain D1605_007755 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D1605_007755 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D1605_007760 PF00483 Nucleotidyl transferase D1605_007765 PF02719 Polysaccharide biosynthesis protein D1605_007770 PF00953 Glycosyl transferase family 4 D1605_007775 PF18073 Rubredoxin metal binding domain D1605_007785 PF00216 Bacterial DNA-binding protein D1605_007790 PF00575 S1 RNA binding domain D1605_007795 PF02224 Cytidylate kinase D1605_007800 PF00444 Ribosomal protein L36 D1605_007810 PF04371 Porphyromonas-type peptidyl-arginine deiminase D1605_007815 PF00795 Carbon-nitrogen hydrolase D1605_007830 PF00528 Binding-protein-dependent transport system inner membrane component D1605_007835 PF00528 Binding-protein-dependent transport system inner membrane component D1605_007860 PF02616 Segregation and condensation protein ScpA D1605_007865 PF04079 Segregation and condensation complex subunit ScpB D1605_007870 PF01479 S4 domain D1605_007870 PF00849 RNA pseudouridylate synthase D1605_007880 PF00795 Carbon-nitrogen hydrolase D1605_007885 PF00155 Aminotransferase class I and II D1605_007890 PF00005 ABC transporter D1605_007895 PF03379 CcmB protein D1605_007900 PF01578 Cytochrome C assembly protein D1605_007910 PF03100 CcmE D1605_007915 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1605_007915 PF01578 Cytochrome C assembly protein D1605_007920 PF08534 Redoxin D1605_007925 PF03918 Cytochrome C biogenesis protein D1605_007940 PF00561 alpha/beta hydrolase fold D1605_007945 PF00295 Glycosyl hydrolases family 28 D1605_007960 PF13419 Haloacid dehalogenase-like hydrolase D1605_007970 PF01979 Amidohydrolase family D1605_007975 PF01132 Elongation factor P (EF-P) OB domain D1605_007975 PF08207 Elongation factor P (EF-P) KOW-like domain D1605_007975 PF09285 Elongation factor P, C-terminal D1605_007980 PF04055 Radical SAM superfamily D1605_007985 PF00588 SpoU rRNA Methylase family D1605_007990 PF00459 Inositol monophosphatase family D1605_008015 PF09115 DNA polymerase III, delta subunit, C terminal D1605_008020 PF02618 YceG-like family D1605_008025 PF04715 Anthranilate synthase component I, N terminal region D1605_008025 PF00425 chorismate binding enzyme D1605_008030 PF00109 Beta-ketoacyl synthase, N-terminal domain D1605_008030 PF02801 Beta-ketoacyl synthase, C-terminal domain D1605_008035 PF00550 Phosphopantetheine attachment site D1605_008045 PF00698 Acyl transferase domain D1605_008050 PF00456 Transketolase, thiamine diphosphate binding domain D1605_008050 PF17831 Pyruvate dehydrogenase E1 component middle domain D1605_008055 PF06594 Haemolysin-type calcium binding protein related domain D1605_008055 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1605_008090 PF00348 Polyprenyl synthetase D1605_008095 PF02609 Exonuclease VII small subunit D1605_008100 PF01171 PP-loop family D1605_008100 PF11734 TilS substrate C-terminal domain D1605_008100 PF09179 TilS substrate binding domain D1605_008105 PF00245 Alkaline phosphatase D1605_008110 PF00375 Sodium:dicarboxylate symporter family D1605_008120 PF00877 NlpC/P60 family D1605_008125 PF00877 NlpC/P60 family D1605_008130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1605_008135 PF04235 Protein of unknown function (DUF418) D1605_008145 PF00730 HhH-GPD superfamily base excision DNA repair protein D1605_008145 PF00633 Helix-hairpin-helix motif D1605_008145 PF10576 Iron-sulfur binding domain of endonuclease III D1605_008155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1605_008155 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1605_008195 PF08501 Shikimate dehydrogenase substrate binding domain D1605_008195 PF01488 Shikimate / quinate 5-dehydrogenase D1605_008195 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D1605_008205 PF02581 Thiamine monophosphate synthase D1605_008205 PF08543 Phosphomethylpyrimidine kinase D1605_008210 PF02683 Cytochrome C biogenesis protein transmembrane region D1605_008210 PF11412 Disulphide bond corrector protein DsbC D1605_008215 PF03091 CutA1 divalent ion tolerance protein D1605_008220 PF00166 Chaperonin 10 Kd subunit D1605_008225 PF00118 TCP-1/cpn60 chaperonin family D1605_008250 PF01370 NAD dependent epimerase/dehydratase family D1605_008255 PF01370 NAD dependent epimerase/dehydratase family D1605_008260 PF16363 GDP-mannose 4,6 dehydratase D1605_008275 PF00291 Pyridoxal-phosphate dependent enzyme D1605_008295 PF07715 TonB-dependent Receptor Plug Domain D1605_008295 PF00593 TonB dependent receptor D1605_008300 PF13640 2OG-Fe(II) oxygenase superfamily D1605_008300 PF18331 PKHD-type hydroxylase C-terminal domain D1605_008320 PF02424 ApbE family D1605_008330 PF01636 Phosphotransferase enzyme family D1605_008335 PF00483 Nucleotidyl transferase D1605_008340 PF00308 Bacterial dnaA protein D1605_008345 PF01594 AI-2E family transporter D1605_008355 PF00586 AIR synthase related protein, N-terminal domain D1605_008355 PF02769 AIR synthase related protein, C-terminal domain D1605_008365 PF00551 Formyl transferase D1605_008380 PF02223 Thymidylate kinase D1605_008385 PF01431 Peptidase family M13 D1605_008385 PF05649 Peptidase family M13 D1605_008395 PF07977 FabA-like domain D1605_008400 PF01171 PP-loop family D1605_008405 PF04381 Putative exonuclease, RdgC D1605_008415 PF00762 Ferrochelatase D1605_008425 PF02416 mttA/Hcf106 family D1605_008430 PF02416 mttA/Hcf106 family D1605_008435 PF00902 Sec-independent protein translocase protein (TatC) D1605_008445 PF00117 Glutamine amidotransferase class-I D1605_008445 PF00958 GMP synthase C terminal domain D1605_008455 PF00127 Copper binding proteins, plastocyanin/azurin family D1605_008460 PF03193 RsgA GTPase D1605_008465 PF02021 Uncharacterised protein family UPF0102 D1605_008470 PF04348 LppC putative lipoprotein D1605_008475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1605_008480 PF00593 TonB dependent receptor D1605_008480 PF07715 TonB-dependent Receptor Plug Domain D1605_008485 PF09334 tRNA synthetases class I (M) D1605_008485 PF01588 Putative tRNA binding domain D1605_008495 PF04060 Putative Fe-S cluster D1605_008550 PF08275 DNA primase catalytic core, N-terminal domain D1605_008550 PF01807 CHC2 zinc finger D1605_008570 PF00436 Single-strand binding protein family D1605_008615 PF07963 Prokaryotic N-terminal methylation motif D1605_008615 PF00114 Pilin (bacterial filament) D1605_008620 PF05567 Neisseria PilC beta-propeller domain D1605_008640 PF07963 Prokaryotic N-terminal methylation motif D1605_008640 PF14245 Type IV pilin PilA D1605_008645 PF11892 Domain of unknown function (DUF3412) D1605_008645 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D1605_008645 PF03641 Possible lysine decarboxylase D1605_008650 PF12792 CSS motif domain associated with EAL D1605_008650 PF00563 EAL domain D1605_008655 PF00899 ThiF family D1605_008660 PF01926 50S ribosome-binding GTPase D1605_008660 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D1605_008665 PF01011 PQQ enzyme repeat D1605_008665 PF13360 PQQ-like domain D1605_008685 PF04055 Radical SAM superfamily D1605_008690 PF00334 Nucleoside diphosphate kinase D1605_008695 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D1605_008695 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D1605_008700 PF00709 Adenylosuccinate synthetase D1605_008710 PF01145 SPFH domain / Band 7 family D1605_008715 PF01145 SPFH domain / Band 7 family D1605_008715 PF12221 Bacterial membrane protein N terminal D1605_008720 PF00107 Zinc-binding dehydrogenase D1605_008720 PF08240 Alcohol dehydrogenase GroES-like domain D1605_008725 PF00072 Response regulator receiver domain D1605_008740 PF03129 Anticodon binding domain D1605_008740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1605_008740 PF04073 Aminoacyl-tRNA editing domain D1605_008750 PF01066 CDP-alcohol phosphatidyltransferase D1605_008765 PF00933 Glycosyl hydrolase family 3 N terminal domain D1605_008765 PF14310 Fibronectin type III-like domain D1605_008765 PF01915 Glycosyl hydrolase family 3 C-terminal domain D1605_008770 PF00924 Mechanosensitive ion channel D1605_008775 PF02152 Dihydroneopterin aldolase D1605_008780 PF00814 Glycoprotease family D1605_008785 PF01165 Ribosomal protein S21 D1605_008790 PF09424 Yqey-like protein D1605_008795 PF03631 Virulence factor BrkB D1605_008800 PF10410 DnaB-helicase binding domain of primase D1605_008800 PF08278 DNA primase DnaG DnaB-binding D1605_008800 PF01807 CHC2 zinc finger D1605_008800 PF08275 DNA primase catalytic core, N-terminal domain D1605_008810 PF01555 DNA methylase D1605_008820 PF00579 tRNA synthetases class I (W and Y) D1605_008830 PF13538 UvrD-like helicase C-terminal domain D1605_008840 PF12705 PD-(D/E)XK nuclease superfamily D1605_008840 PF13361 UvrD-like helicase C-terminal domain D1605_008840 PF00580 UvrD/REP helicase N-terminal domain D1605_008845 PF17946 RecC C-terminal domain D1605_008850 PF00005 ABC transporter D1605_008855 PF02405 Permease MlaE D1605_008865 PF05494 MlaC protein D1605_008875 PF04333 MlaA lipoprotein D1605_008885 PF02646 RmuC family D1605_008890 PF00005 ABC transporter D1605_008900 PF13520 Amino acid permease D1605_008905 PF10672 S-adenosylmethionine-dependent methyltransferase D1605_008905 PF17785 PUA-like domain D1605_008910 PF03741 Integral membrane protein TerC family D1605_008915 PF01521 Iron-sulphur cluster biosynthesis D1605_008930 PF00072 Response regulator receiver domain D1605_008930 PF00486 Transcriptional regulatory protein, C terminal D1605_008945 PF00210 Ferritin-like domain D1605_008955 PF00293 NUDIX domain D1605_008970 PF02773 S-adenosylmethionine synthetase, C-terminal domain D1605_008970 PF02772 S-adenosylmethionine synthetase, central domain D1605_008970 PF00438 S-adenosylmethionine synthetase, N-terminal domain D1605_008975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_008980 PF00072 Response regulator receiver domain D1605_008980 PF00486 Transcriptional regulatory protein, C terminal D1605_008990 PF01207 Dihydrouridine synthase (Dus) D1605_009000 PF00593 TonB dependent receptor D1605_009000 PF07715 TonB-dependent Receptor Plug Domain D1605_009015 PF10431 C-terminal, D2-small domain, of ClpB protein D1605_009015 PF02861 Clp amino terminal domain, pathogenicity island component D1605_009015 PF17871 AAA lid domain D1605_009015 PF07724 AAA domain (Cdc48 subfamily) D1605_009015 PF00004 ATPase family associated with various cellular activities (AAA) D1605_009020 PF00301 Rubredoxin D1605_009025 PF02581 Thiamine monophosphate synthase D1605_009030 PF00067 Cytochrome P450 D1605_009035 PF08019 Phosphoethanolamine transferase EptA/EptB D1605_009035 PF00884 Sulfatase D1605_009045 PF11741 AMIN domain D1605_009045 PF07660 Secretin and TonB N terminus short domain D1605_009045 PF03958 Bacterial type II/III secretion system short domain D1605_009045 PF00263 Bacterial type II and III secretion system protein D1605_009050 PF04351 Pilus assembly protein, PilP D1605_009055 PF04350 Pilus assembly protein, PilO D1605_009060 PF05137 Fimbrial assembly protein (PilN) D1605_009065 PF11104 Type IV pilus assembly protein PilM; D1605_009070 PF17092 Penicillin-binding protein OB-like domain D1605_009070 PF00912 Transglycosylase D1605_009070 PF00905 Penicillin binding protein transpeptidase domain D1605_009075 PF00248 Aldo/keto reductase family D1605_009080 PF00294 pfkB family carbohydrate kinase D1605_009085 PF05736 OprF membrane domain D1605_009085 PF00691 OmpA family D1605_009090 PF03796 DnaB-like helicase C terminal domain D1605_009090 PF00772 DnaB-like helicase N terminal domain D1605_009120 PF00067 Cytochrome P450 D1605_009125 PF00271 Helicase conserved C-terminal domain D1605_009125 PF17191 RecG wedge domain D1605_009125 PF00270 DEAD/DEAH box helicase D1605_009130 PF01042 Endoribonuclease L-PSP D1605_009135 PF13291 ACT domain D1605_009135 PF04607 Region found in RelA / SpoT proteins D1605_009135 PF02824 TGS domain D1605_009140 PF01565 FAD binding domain D1605_009140 PF02913 FAD linked oxidases, C-terminal domain D1605_009145 PF05736 OprF membrane domain D1605_009145 PF00691 OmpA family D1605_009150 PF02600 Disulfide bond formation protein DsbB D1605_009155 PF07715 TonB-dependent Receptor Plug Domain D1605_009155 PF00593 TonB dependent receptor D1605_009160 PF02590 Predicted SPOUT methyltransferase D1605_009260 PF10548 P22AR C-terminal domain D1605_009260 PF02498 BRO family, N-terminal domain D1605_009305 PF12344 Ultra-violet resistance protein B D1605_009305 PF04851 Type III restriction enzyme, res subunit D1605_009305 PF00271 Helicase conserved C-terminal domain D1605_009305 PF02151 UvrB/uvrC motif D1605_009305 PF17757 UvrB interaction domain D1605_009320 PF00701 Dihydrodipicolinate synthetase family D1605_009330 PF00578 AhpC/TSA family D1605_009350 PF00586 AIR synthase related protein, N-terminal domain D1605_009350 PF02769 AIR synthase related protein, C-terminal domain D1605_009355 PF01029 NusB family D1605_009360 PF00885 6,7-dimethyl-8-ribityllumazine synthase D1605_009365 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D1605_009365 PF00925 GTP cyclohydrolase II D1605_009370 PF00677 Lumazine binding domain D1605_009375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1605_009375 PF01872 RibD C-terminal domain D1605_009380 PF03477 ATP cone domain D1605_009390 PF00464 Serine hydroxymethyltransferase D1605_009395 PF00005 ABC transporter D1605_009395 PF12848 ABC transporter D1605_009400 PF06039 Malate:quinone oxidoreductase (Mqo) D1605_009405 PF04134 Protein of unknown function, DUF393 D1605_009410 PF02578 Multi-copper polyphenol oxidoreductase laccase D1605_009415 PF01479 S4 domain D1605_009415 PF00849 RNA pseudouridylate synthase D1605_009420 PF13525 Outer membrane lipoprotein D1605_009430 PF17910 FeoB cytosolic helical domain D1605_009430 PF02421 Ferrous iron transport protein B D1605_009430 PF07670 Nucleoside recognition D1605_009430 PF04023 FeoA domain D1605_009430 PF07664 Ferrous iron transport protein B C terminus D1605_009440 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D1605_009445 PF01029 NusB family D1605_009445 PF01189 16S rRNA methyltransferase RsmB/F D1605_009450 PF00551 Formyl transferase D1605_009450 PF02911 Formyl transferase, C-terminal domain D1605_009455 PF01327 Polypeptide deformylase D1605_009465 PF02481 DNA recombination-mediator protein A D1605_009465 PF17782 DprA winged helix domain D1605_009470 PF04361 Protein of unknown function (DUF494) D1605_009475 PF01131 DNA topoisomerase D1605_009475 PF13368 Topoisomerase C-terminal repeat D1605_009475 PF01751 Toprim domain D1605_009480 PF01300 Telomere recombination D1605_009510 PF04386 Stringent starvation protein B D1605_009515 PF00043 Glutathione S-transferase, C-terminal domain D1605_009515 PF02798 Glutathione S-transferase, N-terminal domain D1605_009520 PF02167 Cytochrome C1 family D1605_009525 PF00033 Cytochrome b/b6/petB D1605_009525 PF00032 Cytochrome b(C-terminal)/b6/petD D1605_009530 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D1605_009530 PF00355 Rieske [2Fe-2S] domain D1605_009535 PF01464 Transglycosylase SLT domain D1605_009540 PF00919 Uncharacterized protein family UPF0004 D1605_009540 PF01938 TRAM domain D1605_009540 PF04055 Radical SAM superfamily D1605_009545 PF02562 PhoH-like protein D1605_009550 PF02130 Uncharacterized protein family UPF0054 D1605_009560 PF00571 CBS domain D1605_009560 PF03471 Transporter associated domain D1605_009570 PF01544 CorA-like Mg2+ transporter protein D1605_009605 PF13332 Hemagglutinin repeat D1605_009605 PF13018 Extended Signal Peptide of Type V secretion system D1605_009605 PF04829 Pre-toxin domain with VENN motif D1605_009605 PF05860 haemagglutination activity domain D1605_009605 PF04829 Pre-toxin domain with VENN motif D1605_009605 PF13018 Extended Signal Peptide of Type V secretion system D1605_009605 PF13332 Hemagglutinin repeat D1605_009605 PF05860 haemagglutination activity domain D1605_009625 PF14814 Bifunctional transglycosylase second domain D1605_009625 PF00912 Transglycosylase D1605_009625 PF00905 Penicillin binding protein transpeptidase domain D1605_009635 PF13307 Helicase C-terminal domain D1605_009635 PF04851 Type III restriction enzyme, res subunit D1605_009645 PF00484 Carbonic anhydrase D1605_009655 PF01522 Polysaccharide deacetylase D1605_009665 PF09383 NIL domain D1605_009665 PF00005 ABC transporter D1605_009670 PF00528 Binding-protein-dependent transport system inner membrane component D1605_009675 PF03180 NLPA lipoprotein D1605_009690 PF00364 Biotin-requiring enzyme D1605_009690 PF02817 e3 binding domain D1605_009690 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1605_009695 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1605_009695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1605_009705 PF01545 Cation efflux family D1605_009710 PF01053 Cys/Met metabolism PLP-dependent enzyme D1605_009715 PF00561 alpha/beta hydrolase fold D1605_009720 PF01551 Peptidase family M23 D1605_009730 PF01975 Survival protein SurE D1605_009740 PF09335 SNARE associated Golgi protein D1605_009745 PF01551 Peptidase family M23 D1605_009745 PF01476 LysM domain D1605_009755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_009755 PF00512 His Kinase A (phospho-acceptor) domain D1605_009755 PF00989 PAS fold D1605_009755 PF16736 Single Cache-like D1605_009760 PF01168 Alanine racemase, N-terminal domain D1605_009760 PF00842 Alanine racemase, C-terminal domain D1605_009765 PF01266 FAD dependent oxidoreductase D1605_009770 PF01641 SelR domain D1605_009775 PF00704 Glycosyl hydrolases family 18 D1605_009775 PF01476 LysM domain D1605_009780 PF07691 PA14 domain D1605_009780 PF02838 Glycosyl hydrolase family 20, domain 2 D1605_009780 PF00728 Glycosyl hydrolase family 20, catalytic domain D1605_009790 PF14310 Fibronectin type III-like domain D1605_009790 PF00933 Glycosyl hydrolase family 3 N terminal domain D1605_009790 PF01915 Glycosyl hydrolase family 3 C-terminal domain D1605_009790 PF07691 PA14 domain D1605_009805 PF07971 Glycosyl hydrolase family 92 D1605_009805 PF17678 Glycosyl hydrolase family 92 N-terminal domain D1605_009810 PF01301 Glycosyl hydrolases family 35 D1605_009815 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D1605_009820 PF00639 PPIC-type PPIASE domain D1605_009820 PF09312 SurA N-terminal domain D1605_009825 PF03968 OstA-like protein D1605_009825 PF04453 LPS transport system D D1605_009830 PF01494 FAD binding domain D1605_009835 PF01494 FAD binding domain D1605_009845 PF03466 LysR substrate binding domain D1605_009845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1605_009850 PF14824 Sirohaem biosynthesis protein central D1605_009850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1605_009850 PF10414 Sirohaem synthase dimerisation region D1605_009855 PF00291 Pyridoxal-phosphate dependent enzyme D1605_009875 PF00274 Fructose-bisphosphate aldolase class-I D1605_009880 PF00224 Pyruvate kinase, barrel domain D1605_009880 PF02887 Pyruvate kinase, alpha/beta domain D1605_009885 PF00162 Phosphoglycerate kinase D1605_009895 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1605_009900 PF01475 Ferric uptake regulator family D1605_009910 PF00150 Cellulase (glycosyl hydrolase family 5) D1605_009910 PF00553 Cellulose binding domain D1605_009935 PF03330 Lytic transglycolase D1605_009940 PF01043 SecA preprotein cross-linking domain D1605_009940 PF07516 SecA Wing and Scaffold domain D1605_009940 PF07517 SecA DEAD-like domain D1605_009940 PF02810 SEC-C motif D1605_009945 PF01551 Peptidase family M23 D1605_009945 PF08525 Opacity-associated protein A N-terminal motif D1605_009945 PF01476 LysM domain D1605_009955 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D1605_009960 PF12327 FtsZ family, C-terminal domain D1605_009960 PF00091 Tubulin/FtsZ family, GTPase domain D1605_009965 PF02491 SHS2 domain inserted in FTSA D1605_009970 PF03799 Cell division protein FtsQ D1605_009970 PF08478 POTRA domain, FtsQ-type D1605_009975 PF07478 D-ala D-ala ligase C-terminus D1605_009975 PF01820 D-ala D-ala ligase N-terminus D1605_009980 PF08245 Mur ligase middle domain D1605_009980 PF02875 Mur ligase family, glutamate ligase domain D1605_009980 PF01225 Mur ligase family, catalytic domain D1605_009985 PF03033 Glycosyltransferase family 28 N-terminal domain D1605_009985 PF04101 Glycosyltransferase family 28 C-terminal domain D1605_009990 PF01098 Cell cycle protein D1605_009995 PF00953 Glycosyl transferase family 4 D1605_010000 PF08245 Mur ligase middle domain D1605_010000 PF02875 Mur ligase family, glutamate ligase domain D1605_010000 PF01225 Mur ligase family, catalytic domain D1605_010005 PF01225 Mur ligase family, catalytic domain D1605_010005 PF02875 Mur ligase family, glutamate ligase domain D1605_010005 PF08245 Mur ligase middle domain D1605_010010 PF00905 Penicillin binding protein transpeptidase domain D1605_010010 PF03717 Penicillin-binding Protein dimerisation domain D1605_010015 PF04999 Cell division protein FtsL D1605_010020 PF01795 MraW methylase family D1605_010025 PF02381 MraZ protein, putative antitoxin-like D1605_010035 PF02080 TrkA-C domain D1605_010035 PF03600 Citrate transporter D1605_010040 PF02390 Putative methyltransferase D1605_010045 PF05690 Thiazole biosynthesis protein ThiG D1605_010050 PF05690 Thiazole biosynthesis protein ThiG D1605_010050 PF02597 ThiS family D1605_010090 PF07977 FabA-like domain D1605_010110 PF04273 Putative phosphatase (DUF442) D1605_010110 PF00753 Metallo-beta-lactamase superfamily D1605_010120 PF04143 Sulphur transport D1605_010130 PF01925 Sulfite exporter TauE/SafE D1605_010135 PF00692 dUTPase D1605_010145 PF08676 MutL C terminal dimerisation domain D1605_010145 PF01119 DNA mismatch repair protein, C-terminal domain D1605_010150 PF11741 AMIN domain D1605_010150 PF01520 N-acetylmuramoyl-L-alanine amidase D1605_010155 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D1605_010160 PF01256 Carbohydrate kinase D1605_010160 PF03853 YjeF-related protein N-terminus D1605_010165 PF02601 Exonuclease VII, large subunit D1605_010165 PF13742 OB-fold nucleic acid binding domain D1605_010180 PF00570 HRDC domain D1605_010180 PF01612 3'-5' exonuclease D1605_010190 PF01728 FtsJ-like methyltransferase D1605_010190 PF18125 RlmM ferredoxin-like domain D1605_010210 PF00216 Bacterial DNA-binding protein D1605_010215 PF03147 Ferredoxin-fold anticodon binding domain D1605_010215 PF03484 tRNA synthetase B5 domain D1605_010215 PF01588 Putative tRNA binding domain D1605_010215 PF03483 B3/4 domain D1605_010215 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D1605_010220 PF01409 tRNA synthetases class II core domain (F) D1605_010220 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D1605_010225 PF00453 Ribosomal protein L20 D1605_010230 PF01632 Ribosomal protein L35 D1605_010235 PF05198 Translation initiation factor IF-3, N-terminal domain D1605_010235 PF00707 Translation initiation factor IF-3, C-terminal domain D1605_010240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1605_010240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1605_010240 PF02824 TGS domain D1605_010240 PF03129 Anticodon binding domain D1605_010255 PF18030 RimK PreATP-grasp domain D1605_010255 PF08443 RimK-like ATP-grasp domain D1605_010260 PF00486 Transcriptional regulatory protein, C terminal D1605_010260 PF00072 Response regulator receiver domain D1605_010265 PF00512 His Kinase A (phospho-acceptor) domain D1605_010265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_010265 PF00672 HAMP domain D1605_010270 PF01121 Dephospho-CoA kinase D1605_010275 PF01478 Type IV leader peptidase family D1605_010275 PF06750 Bacterial Peptidase A24 N-terminal domain D1605_010280 PF00482 Type II secretion system (T2SS), protein F D1605_010285 PF00114 Pilin (bacterial filament) D1605_010285 PF07963 Prokaryotic N-terminal methylation motif D1605_010295 PF07963 Prokaryotic N-terminal methylation motif D1605_010295 PF00114 Pilin (bacterial filament) D1605_010300 PF00437 Type II/IV secretion system protein D1605_010300 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D1605_010305 PF00158 Sigma-54 interaction domain D1605_010305 PF00072 Response regulator receiver domain D1605_010305 PF02954 Bacterial regulatory protein, Fis family D1605_010310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_010310 PF00512 His Kinase A (phospho-acceptor) domain D1605_010315 PF00549 CoA-ligase D1605_010315 PF08442 ATP-grasp domain D1605_010320 PF00549 CoA-ligase D1605_010320 PF02629 CoA binding domain D1605_010330 PF08479 POTRA domain, ShlB-type D1605_010330 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D1605_010330 PF17287 POTRA domain D1605_010340 PF00521 DNA gyrase/topoisomerase IV, subunit A D1605_010340 PF03989 DNA gyrase C-terminal domain, beta-propeller D1605_010345 PF01008 Initiation factor 2 subunit family D1605_010355 PF00152 tRNA synthetases class II (D, K and N) D1605_010365 PF00533 BRCA1 C Terminus (BRCT) domain D1605_010365 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D1605_010365 PF01653 NAD-dependent DNA ligase adenylation domain D1605_010365 PF12826 Helix-hairpin-helix motif D1605_010365 PF03120 NAD-dependent DNA ligase OB-fold domain D1605_010370 PF04354 ZipA, C-terminal FtsZ-binding domain D1605_010375 PF02463 RecF/RecN/SMC N terminal domain D1605_010380 PF01281 Ribosomal protein L9, N-terminal domain D1605_010380 PF03948 Ribosomal protein L9, C-terminal domain D1605_010385 PF01084 Ribosomal protein S18 D1605_010390 PF01250 Ribosomal protein S6 D1605_010395 PF01521 Iron-sulphur cluster biosynthesis D1605_010400 PF01336 OB-fold nucleic acid binding domain D1605_010400 PF00152 tRNA synthetases class II (D, K and N) D1605_010405 PF01061 ABC-2 type transporter D1605_010410 PF00005 ABC transporter D1605_010425 PF01180 Dihydroorotate dehydrogenase D1605_010430 PF01565 FAD binding domain D1605_010430 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D1605_010435 PF00892 EamA-like transporter family D1605_010440 PF01569 PAP2 superfamily D1605_010445 PF04551 GcpE protein D1605_010455 PF00072 Response regulator receiver domain D1605_010460 PF00889 Elongation factor TS D1605_010465 PF00318 Ribosomal protein S2 D1605_010475 PF00664 ABC transporter transmembrane region D1605_010475 PF00005 ABC transporter D1605_010490 PF02321 Outer membrane efflux protein D1605_010495 PF00149 Calcineurin-like phosphoesterase D1605_010505 PF02541 Ppx/GppA phosphatase family D1605_010510 PF17941 Polyphosphate kinase C-terminal domain 1 D1605_010510 PF13089 Polyphosphate kinase N-terminal domain D1605_010510 PF02503 Polyphosphate kinase middle domain D1605_010510 PF13090 Polyphosphate kinase C-terminal domain 2 D1605_010515 PF00989 PAS fold D1605_010515 PF11808 Phosphate regulon sensor protein PhoR D1605_010515 PF00512 His Kinase A (phospho-acceptor) domain D1605_010515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_010520 PF00486 Transcriptional regulatory protein, C terminal D1605_010520 PF00072 Response regulator receiver domain D1605_010525 PF01435 Peptidase family M48 D1605_010525 PF13181 Tetratricopeptide repeat D1605_010530 PF00462 Glutaredoxin D1605_010535 PF18324 Hypothetical protein TT1725 D1605_010535 PF00180 Isocitrate/isopropylmalate dehydrogenase D1605_010545 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D1605_010545 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D1605_010550 PF11893 Domain of unknown function (DUF3413) D1605_010550 PF00884 Sulfatase D1605_010555 PF00037 4Fe-4S binding domain D1605_010555 PF11953 Domain of unknown function (DUF3470) D1605_010565 PF01106 NifU-like domain D1605_010570 PF01329 Pterin 4 alpha carbinolamine dehydratase D1605_010580 PF01479 S4 domain D1605_010580 PF00849 RNA pseudouridylate synthase D1605_010585 PF00575 S1 RNA binding domain D1605_010585 PF12111 Polyribonucleotide phosphorylase C terminal D1605_010585 PF10150 Ribonuclease E/G family D1605_010590 PF00196 Bacterial regulatory proteins, luxR family D1605_010590 PF00072 Response regulator receiver domain D1605_010595 PF17773 UPF0176 acylphosphatase like domain D1605_010605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D1605_010605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D1605_010610 PF00545 ribonuclease D1605_010620 PF12848 ABC transporter D1605_010620 PF16326 ABC transporter C-terminal domain D1605_010620 PF00005 ABC transporter D1605_010630 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D1605_010635 PF00313 'Cold-shock' DNA-binding domain D1605_010640 PF00072 Response regulator receiver domain D1605_010640 PF00563 EAL domain D1605_010640 PF00990 Diguanylate cyclase, GGDEF domain D1605_010645 PF01435 Peptidase family M48 D1605_010650 PF00009 Elongation factor Tu GTP binding domain D1605_010650 PF03144 Elongation factor Tu domain 2 D1605_010650 PF03143 Elongation factor Tu C-terminal domain D1605_010655 PF00679 Elongation factor G C-terminus D1605_010655 PF00009 Elongation factor Tu GTP binding domain D1605_010655 PF14492 Elongation Factor G, domain II D1605_010655 PF03764 Elongation factor G, domain IV D1605_010655 PF03144 Elongation factor Tu domain 2 D1605_010660 PF00177 Ribosomal protein S7p/S5e D1605_010665 PF00164 Ribosomal protein S12/S23 D1605_010670 PF04997 RNA polymerase Rpb1, domain 1 D1605_010670 PF04998 RNA polymerase Rpb1, domain 5 D1605_010670 PF05000 RNA polymerase Rpb1, domain 4 D1605_010670 PF04983 RNA polymerase Rpb1, domain 3 D1605_010670 PF00623 RNA polymerase Rpb1, domain 2 D1605_010675 PF10385 RNA polymerase beta subunit external 1 domain D1605_010675 PF04563 RNA polymerase beta subunit D1605_010675 PF04560 RNA polymerase Rpb2, domain 7 D1605_010675 PF04561 RNA polymerase Rpb2, domain 2 D1605_010675 PF00562 RNA polymerase Rpb2, domain 6 D1605_010675 PF04565 RNA polymerase Rpb2, domain 3 D1605_010680 PF16320 Ribosomal protein L7/L12 dimerisation domain D1605_010680 PF00542 Ribosomal protein L7/L12 C-terminal domain D1605_010685 PF00466 Ribosomal protein L10 D1605_010690 PF00687 Ribosomal protein L1p/L10e family D1605_010695 PF00298 Ribosomal protein L11, RNA binding domain D1605_010695 PF03946 Ribosomal protein L11, N-terminal domain D1605_010700 PF02357 Transcription termination factor nusG D1605_010700 PF00467 KOW motif D1605_010715 PF03143 Elongation factor Tu C-terminal domain D1605_010715 PF03144 Elongation factor Tu domain 2 D1605_010715 PF00009 Elongation factor Tu GTP binding domain D1605_010735 PF06071 Protein of unknown function (DUF933) D1605_010735 PF01926 50S ribosome-binding GTPase D1605_010740 PF01195 Peptidyl-tRNA hydrolase D1605_010745 PF14693 Ribosomal protein TL5, C-terminal domain D1605_010745 PF01386 Ribosomal L25p family D1605_010750 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D1605_010750 PF14572 Phosphoribosyl synthetase-associated domain D1605_010760 PF08544 GHMP kinases C terminal D1605_010760 PF00288 GHMP kinases N terminal domain D1605_010765 PF03550 Outer membrane lipoprotein LolB D1605_010775 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D1605_010775 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D1605_010775 PF01488 Shikimate / quinate 5-dehydrogenase D1605_010780 PF00472 RF-1 domain D1605_010780 PF03462 PCRF domain D1605_010785 PF02926 THUMP domain D1605_010785 PF10672 S-adenosylmethionine-dependent methyltransferase D1605_010785 PF01170 Putative RNA methylase family UPF0020 D1605_010825 PF01914 MarC family integral membrane protein D1605_010835 PF00462 Glutaredoxin D1605_010840 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D1605_010840 PF02222 ATP-grasp domain D1605_010845 PF00731 AIR carboxylase D1605_010865 PF07732 Multicopper oxidase D1605_010865 PF07731 Multicopper oxidase D1605_010875 PF13361 UvrD-like helicase C-terminal domain D1605_010875 PF00580 UvrD/REP helicase N-terminal domain D1605_010880 PF04349 Periplasmic glucan biosynthesis protein, MdoG D1605_010885 PF01343 Peptidase family S49 D1605_010890 PF01554 MatE D1605_010905 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D1605_010905 PF18074 Primosomal protein N C-terminal domain D1605_010905 PF17764 3′ DNA-binding domain (3′BD) D1605_010905 PF00271 Helicase conserved C-terminal domain D1605_010905 PF00270 DEAD/DEAH box helicase D1605_010910 PF04545 Sigma-70, region 4 D1605_010910 PF04542 Sigma-70 region 2 D1605_010915 PF03167 Uracil DNA glycosylase superfamily D1605_010920 PF01339 CheB methylesterase D1605_010920 PF00072 Response regulator receiver domain D1605_010925 PF18075 FtsX extracellular domain D1605_010930 PF00005 ABC transporter D1605_010935 PF00270 DEAD/DEAH box helicase D1605_010935 PF12300 ATP-dependent RNA helicase RhlB D1605_010935 PF00271 Helicase conserved C-terminal domain D1605_010940 PF00085 Thioredoxin D1605_010945 PF07497 Rho termination factor, RNA-binding domain D1605_010945 PF07498 Rho termination factor, N-terminal domain D1605_010945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1605_010950 PF03971 Monomeric isocitrate dehydrogenase D1605_010960 PF13180 PDZ domain D1605_010960 PF03572 Peptidase family S41 D1605_010965 PF01551 Peptidase family M23 D1605_010980 PF00150 Cellulase (glycosyl hydrolase family 5) D1605_010985 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D1605_010985 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1605_010990 PF00310 Glutamine amidotransferases class-II D1605_010990 PF01493 GXGXG motif D1605_010990 PF01645 Conserved region in glutamate synthase D1605_010990 PF04898 Glutamate synthase central domain D1605_010995 PF03807 NADP oxidoreductase coenzyme F420-dependent D1605_010995 PF14748 Pyrroline-5-carboxylate reductase dimerisation D1605_011045 PF18766 SWI2/SNF2 ATPase D1605_011045 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D1605_011045 PF11867 Domain of unknown function (DUF3387) D1605_011055 PF02384 N-6 DNA Methylase D1605_011055 PF12161 HsdM N-terminal domain D1605_011065 PF12008 Type I restriction and modification enzyme - subunit R C terminal D1605_011065 PF18766 SWI2/SNF2 ATPase D1605_011065 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D1605_011070 PF01420 Type I restriction modification DNA specificity domain D1605_011080 PF12161 HsdM N-terminal domain D1605_011080 PF02384 N-6 DNA Methylase D1605_011085 PF01810 LysE type translocator D1605_011095 PF11855 Protein of unknown function (DUF3375) D1605_011190 PF06594 Haemolysin-type calcium binding protein related domain D1605_011190 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1605_011205 PF06594 Haemolysin-type calcium binding protein related domain D1605_011205 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1605_011240 PF01381 Helix-turn-helix D1605_011245 PF05973 Phage derived protein Gp49-like (DUF891) D1605_011325 PF13018 Extended Signal Peptide of Type V secretion system D1605_011325 PF13332 Hemagglutinin repeat D1605_011325 PF05860 haemagglutination activity domain D1605_011325 PF04829 Pre-toxin domain with VENN motif D1605_011330 PF10396 GTP-binding protein TrmE N-terminus D1605_011330 PF12631 MnmE helical domain D1605_011330 PF01926 50S ribosome-binding GTPase D1605_011340 PF02096 60Kd inner membrane protein D1605_011340 PF14849 YidC periplasmic domain D1605_011345 PF00825 Ribonuclease P D1605_011350 PF00468 Ribosomal protein L34 D1605_011355 PF10502 Signal peptidase, peptidase S26 D1605_011360 PF01131 DNA topoisomerase D1605_011360 PF01751 Toprim domain D1605_011370 PF08401 Domain of unknown function (DUF1738) D1605_011370 PF18818 Metallopeptidase superfamily domain D1605_011370 PF13362 Toprim domain D1605_011395 PF00239 Resolvase, N terminal domain D1605_011430 PF03743 Bacterial conjugation TrbI-like protein D1605_011440 PF03524 Conjugal transfer protein D1605_011450 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D1605_011465 PF00437 Type II/IV secretion system protein D1605_011470 PF16509 TrfB plasmid transcriptional repressor D1605_011475 PF00436 Single-strand binding protein family D1605_011490 PF17394 Uncharacterized KleE stable inheritance protein D1605_011495 PF12323 Helix-turn-helix domain D1605_011495 PF01385 Probable transposase D1605_011495 PF07282 Putative transposase DNA-binding domain D1605_011505 PF16509 TrfB plasmid transcriptional repressor D1605_011510 PF13614 AAA domain D1605_011515 PF08535 KorB domain D1605_011515 PF06613 KorB C-terminal beta-barrel domain D1605_011515 PF02195 ParB-like nuclease domain D1605_011530 PF11657 Transcriptional activator TraM D1605_011535 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D1605_011550 PF03432 Relaxase/Mobilisation nuclease domain D1605_011550 PF18821 Large polyvalent protein-associated domain 7 D1605_011555 PF02534 Type IV secretory system Conjugative DNA transfer