locus-tag class description KBP48_00005 PF00308 Bacterial dnaA protein KBP48_00005 PF08299 Bacterial dnaA protein helix-turn-helix KBP48_00005 PF11638 DnaA N-terminal domain KBP48_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KBP48_00010 PF02767 DNA polymerase III beta subunit, central domain KBP48_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KBP48_00015 PF02463 RecF/RecN/SMC N terminal domain KBP48_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_00020 PF18053 DNA gyrase B subunit insert domain KBP48_00020 PF01751 Toprim domain KBP48_00020 PF00204 DNA gyrase B KBP48_00020 PF00986 DNA gyrase B subunit, carboxyl terminus KBP48_00030 PF01435 Peptidase family M48 KBP48_00040 PF03544 Gram-negative bacterial TonB protein C-terminal KBP48_00045 PF01618 MotA/TolQ/ExbB proton channel family KBP48_00050 PF02472 Biopolymer transport protein ExbD/TolR KBP48_00055 PF02472 Biopolymer transport protein ExbD/TolR KBP48_00070 PF01218 Coproporphyrinogen III oxidase KBP48_00090 PF00793 DAHP synthetase I family KBP48_00115 PF05567 Neisseria PilC beta-propeller domain KBP48_00125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KBP48_00130 PF00155 Aminotransferase class I and II KBP48_00135 PF01741 Large-conductance mechanosensitive channel, MscL KBP48_00145 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KBP48_00155 PF02559 CarD-like/TRCF domain KBP48_00155 PF00270 DEAD/DEAH box helicase KBP48_00155 PF00271 Helicase conserved C-terminal domain KBP48_00155 PF03461 TRCF domain KBP48_00155 PF17757 UvrB interaction domain KBP48_00160 PF01220 Dehydroquinase class II KBP48_00165 PF00364 Biotin-requiring enzyme KBP48_00170 PF02785 Biotin carboxylase C-terminal domain KBP48_00170 PF00289 Biotin carboxylase, N-terminal domain KBP48_00170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KBP48_00175 PF13361 UvrD-like helicase C-terminal domain KBP48_00175 PF00580 UvrD/REP helicase N-terminal domain KBP48_00180 PF00970 Oxidoreductase FAD-binding domain KBP48_00180 PF00042 Globin KBP48_00180 PF00175 Oxidoreductase NAD-binding domain KBP48_00190 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KBP48_00195 PF08535 KorB domain KBP48_00195 PF06613 KorB C-terminal beta-barrel domain KBP48_00195 PF02195 ParB-like nuclease domain KBP48_00200 PF06968 Biotin and Thiamin Synthesis associated domain KBP48_00200 PF04055 Radical SAM superfamily KBP48_00205 PF01734 Patatin-like phospholipase KBP48_00210 PF01040 UbiA prenyltransferase family KBP48_00250 PF01578 Cytochrome C assembly protein KBP48_00255 PF02978 Signal peptide binding domain KBP48_00255 PF00448 SRP54-type protein, GTPase domain KBP48_00255 PF02881 SRP54-type protein, helical bundle domain KBP48_00275 PF13953 PapC C-terminal domain KBP48_00275 PF13954 PapC N-terminal domain KBP48_00275 PF00577 Outer membrane usher protein KBP48_00280 PF02753 Pili assembly chaperone PapD, C-terminal domain KBP48_00280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KBP48_00285 PF16970 Type-1 fimbrial protein, A KBP48_00290 PF02464 Competence-damaged protein KBP48_00295 PF00083 Sugar (and other) transporter KBP48_00300 PF13167 GTP-binding GTPase N-terminal KBP48_00300 PF01926 50S ribosome-binding GTPase KBP48_00300 PF16360 GTP-binding GTPase Middle Region KBP48_00305 PF17209 Hfq protein KBP48_00315 PF00809 Pterin binding enzyme KBP48_00320 PF00004 ATPase family associated with various cellular activities (AAA) KBP48_00320 PF17862 AAA+ lid domain KBP48_00320 PF06480 FtsH Extracellular KBP48_00320 PF01434 Peptidase family M41 KBP48_00325 PF01728 FtsJ-like methyltransferase KBP48_00330 PF01985 CRS1 / YhbY (CRM) domain KBP48_00340 PF00920 Dehydratase family KBP48_00360 PF03279 Bacterial lipid A biosynthesis acyltransferase KBP48_00365 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KBP48_00375 PF00886 Ribosomal protein S16 KBP48_00380 PF05239 PRC-barrel domain KBP48_00380 PF01782 RimM N-terminal domain KBP48_00385 PF01746 tRNA (Guanine-1)-methyltransferase KBP48_00390 PF01245 Ribosomal protein L19 KBP48_00395 PF00557 Metallopeptidase family M24 KBP48_00400 PF00132 Bacterial transferase hexapeptide (six repeats) KBP48_00400 PF14602 Hexapeptide repeat of succinyl-transferase KBP48_00400 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KBP48_00405 PF03960 ArsC family KBP48_00410 PF07687 Peptidase dimerisation domain KBP48_00410 PF01546 Peptidase family M20/M25/M40 KBP48_00415 PF13537 Glutamine amidotransferase domain KBP48_00415 PF00733 Asparagine synthase KBP48_00425 PF03060 Nitronate monooxygenase KBP48_00430 PF01726 LexA DNA binding domain KBP48_00430 PF00717 Peptidase S24-like KBP48_00435 PF00154 recA bacterial DNA recombination protein KBP48_00440 PF02272 DHHA1 domain KBP48_00440 PF01411 tRNA synthetases class II (A) KBP48_00440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KBP48_00445 PF02599 Global regulator protein family KBP48_00455 PF01432 Peptidase family M3 KBP48_00470 PF07731 Multicopper oxidase KBP48_00470 PF07732 Multicopper oxidase KBP48_00470 PF00394 Multicopper oxidase KBP48_00475 PF05275 Copper resistance protein B precursor (CopB) KBP48_00480 PF08264 Anticodon-binding domain of tRNA KBP48_00480 PF10458 Valyl tRNA synthetase tRNA binding arm KBP48_00480 PF00133 tRNA synthetases class I (I, L, M and V) KBP48_00495 PF02789 Cytosol aminopeptidase family, N-terminal domain KBP48_00495 PF00883 Cytosol aminopeptidase family, catalytic domain KBP48_00515 PF01380 SIS domain KBP48_00525 PF17284 Spermidine synthase tetramerisation domain KBP48_00530 PF17810 Arginine decarboxylase helical bundle domain KBP48_00530 PF17944 Arginine decarboxylase C-terminal helical extension KBP48_00530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KBP48_00535 PF00106 short chain dehydrogenase KBP48_00545 PF00750 tRNA synthetases class I (R) KBP48_00545 PF05746 DALR anticodon binding domain KBP48_00545 PF03485 Arginyl tRNA synthetase N terminal domain KBP48_00550 PF04002 RadC-like JAB domain KBP48_00555 PF04127 DNA / pantothenate metabolism flavoprotein KBP48_00555 PF02441 Flavoprotein KBP48_00560 PF00692 dUTPase KBP48_00565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KBP48_00565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KBP48_00565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KBP48_00565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KBP48_00575 PF00156 Phosphoribosyl transferase domain KBP48_00610 PF07690 Major Facilitator Superfamily KBP48_00615 PF03702 Anhydro-N-acetylmuramic acid kinase KBP48_00625 PF00579 tRNA synthetases class I (W and Y) KBP48_00660 PF01578 Cytochrome C assembly protein KBP48_00675 PF00009 Elongation factor Tu GTP binding domain KBP48_00675 PF16658 Class II release factor RF3, C-terminal domain KBP48_00680 PF03006 Haemolysin-III related KBP48_00685 PF00535 Glycosyl transferase family 2 KBP48_00690 PF01026 TatD related DNase KBP48_00705 PF01597 Glycine cleavage H-protein KBP48_00710 PF01571 Aminomethyltransferase folate-binding domain KBP48_00710 PF08669 Glycine cleavage T-protein C-terminal barrel domain KBP48_00720 PF01145 SPFH domain / Band 7 family KBP48_00720 PF16200 C-terminal region of band_7 KBP48_00725 PF03819 MazG nucleotide pyrophosphohydrolase domain KBP48_00730 PF00459 Inositol monophosphatase family KBP48_00735 PF00293 NUDIX domain KBP48_00740 PF00202 Aminotransferase class-III KBP48_00745 PF04452 RNA methyltransferase KBP48_00750 PF00270 DEAD/DEAH box helicase KBP48_00750 PF00271 Helicase conserved C-terminal domain KBP48_00755 PF01242 6-pyruvoyl tetrahydropterin synthase KBP48_00780 PF03653 Uncharacterised protein family (UPF0093) KBP48_00785 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KBP48_00790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KBP48_00790 PF07733 Bacterial DNA polymerase III alpha NTPase domain KBP48_00790 PF02811 PHP domain KBP48_00790 PF01336 OB-fold nucleic acid binding domain KBP48_00790 PF14579 Helix-hairpin-helix motif KBP48_00795 PF01259 SAICAR synthetase KBP48_00800 PF01556 DnaJ C terminal domain KBP48_00800 PF00684 DnaJ central domain KBP48_00800 PF00226 DnaJ domain KBP48_00805 PF00834 Ribulose-phosphate 3 epimerase family KBP48_00810 PF04715 Anthranilate synthase component I, N terminal region KBP48_00810 PF00425 chorismate binding enzyme KBP48_00815 PF00117 Glutamine amidotransferase class-I KBP48_00820 PF02885 Glycosyl transferase family, helical bundle domain KBP48_00820 PF00591 Glycosyl transferase family, a/b domain KBP48_00825 PF00218 Indole-3-glycerol phosphate synthase KBP48_00845 PF00557 Metallopeptidase family M24 KBP48_00845 PF01321 Creatinase/Prolidase N-terminal domain KBP48_00860 PF01702 Queuine tRNA-ribosyltransferase KBP48_00865 PF02699 Preprotein translocase subunit KBP48_00870 PF07549 SecD/SecF GG Motif KBP48_00870 PF13721 SecD export protein N-terminal TM region KBP48_00870 PF02355 Protein export membrane protein KBP48_00875 PF07549 SecD/SecF GG Motif KBP48_00875 PF02355 Protein export membrane protein KBP48_00885 PF12627 Probable RNA and SrmB- binding site of polymerase A KBP48_00885 PF01743 Poly A polymerase head domain KBP48_00885 PF12626 Polymerase A arginine-rich C-terminus KBP48_00890 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KBP48_00895 PF02548 Ketopantoate hydroxymethyltransferase KBP48_00900 PF02569 Pantoate-beta-alanine ligase KBP48_00905 PF02261 Aspartate decarboxylase KBP48_00910 PF00342 Phosphoglucose isomerase KBP48_00920 PF17384 RimP C-terminal SH3 domain KBP48_00920 PF02576 RimP N-terminal domain KBP48_00925 PF13184 NusA-like KH domain KBP48_00925 PF08529 NusA N-terminal domain KBP48_00925 PF00575 S1 RNA binding domain KBP48_00930 PF00009 Elongation factor Tu GTP binding domain KBP48_00930 PF11987 Translation-initiation factor 2 KBP48_00930 PF08364 Bacterial translation initiation factor IF-2 associated region KBP48_00930 PF04760 Translation initiation factor IF-2, N-terminal region KBP48_00935 PF02033 Ribosome-binding factor A KBP48_00940 PF01509 TruB family pseudouridylate synthase (N terminal domain) KBP48_00940 PF16198 tRNA pseudouridylate synthase B C-terminal domain KBP48_00940 PF09157 Pseudouridine synthase II TruB, C-terminal KBP48_00945 PF00312 Ribosomal protein S15 KBP48_00950 PF03725 3' exoribonuclease family, domain 2 KBP48_00950 PF00013 KH domain KBP48_00950 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KBP48_00950 PF01138 3' exoribonuclease family, domain 1 KBP48_00950 PF00575 S1 RNA binding domain KBP48_00955 PF01638 HxlR-like helix-turn-helix KBP48_00960 PF05368 NmrA-like family KBP48_00995 PF00270 DEAD/DEAH box helicase KBP48_00995 PF00271 Helicase conserved C-terminal domain KBP48_00995 PF03880 DbpA RNA binding domain KBP48_01005 PF00766 Electron transfer flavoprotein FAD-binding domain KBP48_01005 PF01012 Electron transfer flavoprotein domain KBP48_01010 PF01012 Electron transfer flavoprotein domain KBP48_01015 PF16363 GDP-mannose 4,6 dehydratase KBP48_01020 PF00483 Nucleotidyl transferase KBP48_01025 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KBP48_01030 PF04321 RmlD substrate binding domain KBP48_01035 PF01050 Mannose-6-phosphate isomerase KBP48_01035 PF00483 Nucleotidyl transferase KBP48_01040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KBP48_01040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KBP48_01040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KBP48_01040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KBP48_01060 PF03797 Autotransporter beta-domain KBP48_01060 PF12951 Passenger-associated-transport-repeat KBP48_01060 PF00082 Subtilase family KBP48_01065 PF06779 Uncharacterised MFS-type transporter YbfB KBP48_01075 PF00365 Phosphofructokinase KBP48_01085 PF02875 Mur ligase family, glutamate ligase domain KBP48_01085 PF01225 Mur ligase family, catalytic domain KBP48_01085 PF08245 Mur ligase middle domain KBP48_01090 PF01569 PAP2 superfamily KBP48_01105 PF02789 Cytosol aminopeptidase family, N-terminal domain KBP48_01105 PF00883 Cytosol aminopeptidase family, catalytic domain KBP48_01110 PF01594 AI-2E family transporter KBP48_01130 PF00595 PDZ domain KBP48_01135 PF01370 NAD dependent epimerase/dehydratase family KBP48_01135 PF08338 Domain of unknown function (DUF1731) KBP48_01140 PF13193 AMP-binding enzyme C-terminal domain KBP48_01140 PF00501 AMP-binding enzyme KBP48_01145 PF00330 Aconitase family (aconitate hydratase) KBP48_01145 PF00694 Aconitase C-terminal domain KBP48_01160 PF06434 Aconitate hydratase 2 N-terminus KBP48_01160 PF11791 Aconitate B N-terminal domain KBP48_01160 PF00330 Aconitase family (aconitate hydratase) KBP48_01180 PF11867 Domain of unknown function (DUF3387) KBP48_01180 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KBP48_01180 PF18766 SWI2/SNF2 ATPase KBP48_01185 PF11867 Domain of unknown function (DUF3387) KBP48_01185 PF18766 SWI2/SNF2 ATPase KBP48_01185 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KBP48_01225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KBP48_01235 PF00121 Triosephosphate isomerase KBP48_01250 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KBP48_01255 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KBP48_01260 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KBP48_01265 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KBP48_01275 PF10531 SLBB domain KBP48_01275 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KBP48_01275 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KBP48_01280 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal KBP48_01280 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KBP48_01280 PF00384 Molybdopterin oxidoreductase KBP48_01285 PF00146 NADH dehydrogenase KBP48_01290 PF12838 4Fe-4S dicluster domain KBP48_01295 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KBP48_01300 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KBP48_01305 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KBP48_01305 PF00361 Proton-conducting membrane transporter KBP48_01310 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus KBP48_01310 PF00361 Proton-conducting membrane transporter KBP48_01315 PF00361 Proton-conducting membrane transporter KBP48_01320 PF00106 short chain dehydrogenase KBP48_01325 PF03600 Citrate transporter KBP48_01335 PF00486 Transcriptional regulatory protein, C terminal KBP48_01335 PF00072 Response regulator receiver domain KBP48_01340 PF00512 His Kinase A (phospho-acceptor) domain KBP48_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_01340 PF08521 Two-component sensor kinase N-terminal KBP48_01350 PF00072 Response regulator receiver domain KBP48_01350 PF00196 Bacterial regulatory proteins, luxR family KBP48_01355 PF00512 His Kinase A (phospho-acceptor) domain KBP48_01355 PF09456 RcsC Alpha-Beta-Loop (ABL) KBP48_01355 PF00072 Response regulator receiver domain KBP48_01355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_01370 PF00375 Sodium:dicarboxylate symporter family KBP48_01375 PF00390 Malic enzyme, N-terminal domain KBP48_01375 PF03949 Malic enzyme, NAD binding domain KBP48_01375 PF01515 Phosphate acetyl/butaryl transferase KBP48_01380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_01380 PF00183 Hsp90 protein KBP48_01390 PF01467 Cytidylyltransferase-like KBP48_01405 PF00037 4Fe-4S binding domain KBP48_01415 PF00990 Diguanylate cyclase, GGDEF domain KBP48_01420 PF01551 Peptidase family M23 KBP48_01420 PF08460 Bacterial SH3 domain KBP48_01425 PF01979 Amidohydrolase family KBP48_01430 PF01809 Putative membrane protein insertion efficiency factor KBP48_01435 PF01258 Prokaryotic dksA/traR C4-type zinc finger KBP48_01445 PF05977 Transmembrane secretion effector KBP48_01450 PF02657 Fe-S metabolism associated domain KBP48_01455 PF09190 DALR domain KBP48_01455 PF01406 tRNA synthetases class I (C) catalytic domain KBP48_01470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KBP48_01470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KBP48_01475 PF00764 Arginosuccinate synthase KBP48_01480 PF07687 Peptidase dimerisation domain KBP48_01480 PF01546 Peptidase family M20/M25/M40 KBP48_01485 PF00696 Amino acid kinase family KBP48_01485 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase KBP48_01490 PF01118 Semialdehyde dehydrogenase, NAD binding domain KBP48_01495 PF00206 Lyase KBP48_01500 PF01472 PUA domain KBP48_01500 PF00696 Amino acid kinase family KBP48_01505 PF00171 Aldehyde dehydrogenase family KBP48_01555 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) KBP48_01555 PF06594 Haemolysin-type calcium binding protein related domain KBP48_01560 PF14437 MafB19-like deaminase KBP48_01565 PF02742 Iron dependent repressor, metal binding and dimerisation domain KBP48_01565 PF01325 Iron dependent repressor, N-terminal DNA binding domain KBP48_01570 PF01566 Natural resistance-associated macrophage protein KBP48_01575 PF04376 Arginine-tRNA-protein transferase, N terminus KBP48_01575 PF04377 Arginine-tRNA-protein transferase, C terminus KBP48_01595 PF00082 Subtilase family KBP48_01595 PF12951 Passenger-associated-transport-repeat KBP48_01595 PF03797 Autotransporter beta-domain KBP48_01610 PF01553 Acyltransferase KBP48_01620 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KBP48_01620 PF05221 S-adenosyl-L-homocysteine hydrolase KBP48_01635 PF01351 Ribonuclease HII KBP48_01640 PF02684 Lipid-A-disaccharide synthetase KBP48_01645 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KBP48_01645 PF00132 Bacterial transferase hexapeptide (six repeats) KBP48_01650 PF07977 FabA-like domain KBP48_01655 PF00132 Bacterial transferase hexapeptide (six repeats) KBP48_01655 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KBP48_01660 PF01103 Surface antigen KBP48_01660 PF07244 Surface antigen variable number repeat KBP48_01665 PF17820 PDZ domain KBP48_01665 PF02163 Peptidase family M50 KBP48_01670 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KBP48_01670 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KBP48_01670 PF13288 DXP reductoisomerase C-terminal domain KBP48_01680 PF01255 Putative undecaprenyl diphosphate synthase KBP48_01685 PF01765 Ribosome recycling factor KBP48_01690 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KBP48_01710 PF00696 Amino acid kinase family KBP48_01735 PF01081 KDPG and KHG aldolase KBP48_01740 PF00920 Dehydratase family KBP48_01745 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KBP48_01750 PF02685 Glucokinase KBP48_01755 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KBP48_01755 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KBP48_01760 PF17912 MalK OB fold domain KBP48_01760 PF00005 ABC transporter KBP48_01765 PF01571 Aminomethyltransferase folate-binding domain KBP48_01775 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KBP48_01780 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KBP48_01785 PF00890 FAD binding domain KBP48_01785 PF02910 Fumarate reductase flavoprotein C-term KBP48_01790 PF13085 2Fe-2S iron-sulfur cluster binding domain KBP48_01795 PF03937 Flavinator of succinate dehydrogenase KBP48_01805 PF02687 FtsX-like permease family KBP48_01805 PF12704 MacB-like periplasmic core domain KBP48_01810 PF00005 ABC transporter KBP48_01815 PF00753 Metallo-beta-lactamase superfamily KBP48_01815 PF03772 Competence protein KBP48_01820 PF01618 MotA/TolQ/ExbB proton channel family KBP48_01830 PF00664 ABC transporter transmembrane region KBP48_01830 PF00005 ABC transporter KBP48_01835 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KBP48_01870 PF04984 Phage tail sheath protein subtilisin-like domain KBP48_01870 PF17482 Phage tail sheath C-terminal domain KBP48_01905 PF01381 Helix-turn-helix KBP48_01975 PF00959 Phage lysozyme KBP48_01980 PF01555 DNA methylase KBP48_02045 PF04264 YceI-like domain KBP48_02050 PF13091 PLD-like domain KBP48_02070 PF03358 NADPH-dependent FMN reductase KBP48_02080 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KBP48_02080 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KBP48_02095 PF01612 3'-5' exonuclease KBP48_02095 PF00476 DNA polymerase family A KBP48_02095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KBP48_02095 PF01367 5'-3' exonuclease, C-terminal SAM fold KBP48_02100 PF01113 Dihydrodipicolinate reductase, N-terminus KBP48_02100 PF05173 Dihydrodipicolinate reductase, C-terminus KBP48_02105 PF00117 Glutamine amidotransferase class-I KBP48_02105 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KBP48_02110 PF02142 MGS-like domain KBP48_02110 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KBP48_02110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KBP48_02115 PF03449 Transcription elongation factor, N-terminal KBP48_02115 PF01272 Transcription elongation factor, GreA/GreB, C-term KBP48_02125 PF17768 RecJ OB domain KBP48_02125 PF02272 DHHA1 domain KBP48_02125 PF01368 DHH family KBP48_02135 PF01336 OB-fold nucleic acid binding domain KBP48_02135 PF00152 tRNA synthetases class II (D, K and N) KBP48_02140 PF00072 Response regulator receiver domain KBP48_02145 PF00512 His Kinase A (phospho-acceptor) domain KBP48_02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_02145 PF01627 Hpt domain KBP48_02145 PF00072 Response regulator receiver domain KBP48_02150 PF00378 Enoyl-CoA hydratase/isomerase KBP48_02155 PF01842 ACT domain KBP48_02155 PF00696 Amino acid kinase family KBP48_02165 PF08245 Mur ligase middle domain KBP48_02175 PF00293 NUDIX domain KBP48_02180 PF02219 Methylenetetrahydrofolate reductase KBP48_02190 PF02545 Maf-like protein KBP48_02195 PF10150 Ribonuclease E/G family KBP48_02195 PF00575 S1 RNA binding domain KBP48_02205 PF01523 Putative modulator of DNA gyrase KBP48_02210 PF04751 Protein of unknown function (DUF615) KBP48_02215 PF01523 Putative modulator of DNA gyrase KBP48_02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBP48_02220 PF03466 LysR substrate binding domain KBP48_02235 PF08240 Alcohol dehydrogenase GroES-like domain KBP48_02235 PF00107 Zinc-binding dehydrogenase KBP48_02245 PF00132 Bacterial transferase hexapeptide (six repeats) KBP48_02245 PF14602 Hexapeptide repeat of succinyl-transferase KBP48_02245 PF12804 MobA-like NTP transferase domain KBP48_02255 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KBP48_02255 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KBP48_02260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KBP48_02260 PF02874 ATP synthase alpha/beta family, beta-barrel domain KBP48_02265 PF00231 ATP synthase KBP48_02270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KBP48_02270 PF00306 ATP synthase alpha/beta chain, C terminal domain KBP48_02270 PF02874 ATP synthase alpha/beta family, beta-barrel domain KBP48_02275 PF00213 ATP synthase delta (OSCP) subunit KBP48_02280 PF00430 ATP synthase B/B' CF(0) KBP48_02285 PF00137 ATP synthase subunit C KBP48_02290 PF00119 ATP synthase A chain KBP48_02300 PF00338 Ribosomal protein S10p/S20e KBP48_02305 PF00297 Ribosomal protein L3 KBP48_02310 PF00573 Ribosomal protein L4/L1 family KBP48_02315 PF00276 Ribosomal protein L23 KBP48_02320 PF00181 Ribosomal Proteins L2, RNA binding domain KBP48_02320 PF03947 Ribosomal Proteins L2, C-terminal domain KBP48_02325 PF00203 Ribosomal protein S19 KBP48_02330 PF00237 Ribosomal protein L22p/L17e KBP48_02335 PF07650 KH domain KBP48_02335 PF00189 Ribosomal protein S3, C-terminal domain KBP48_02340 PF00252 Ribosomal protein L16p/L10e KBP48_02345 PF00831 Ribosomal L29 protein KBP48_02350 PF00366 Ribosomal protein S17 KBP48_02355 PF00238 Ribosomal protein L14p/L23e KBP48_02360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KBP48_02360 PF00467 KOW motif KBP48_02365 PF00281 Ribosomal protein L5 KBP48_02365 PF00673 ribosomal L5P family C-terminus KBP48_02370 PF00253 Ribosomal protein S14p/S29e KBP48_02375 PF00410 Ribosomal protein S8 KBP48_02380 PF00347 Ribosomal protein L6 KBP48_02385 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KBP48_02390 PF00333 Ribosomal protein S5, N-terminal domain KBP48_02390 PF03719 Ribosomal protein S5, C-terminal domain KBP48_02395 PF00327 Ribosomal protein L30p/L7e KBP48_02400 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KBP48_02405 PF00344 SecY translocase KBP48_02410 PF00416 Ribosomal protein S13/S18 KBP48_02415 PF00411 Ribosomal protein S11 KBP48_02420 PF00163 Ribosomal protein S4/S9 N-terminal domain KBP48_02420 PF01479 S4 domain KBP48_02425 PF01000 RNA polymerase Rpb3/RpoA insert domain KBP48_02425 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KBP48_02425 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KBP48_02430 PF01196 Ribosomal protein L17 KBP48_02435 PF04380 Membrane fusogenic activity KBP48_02440 PF13335 Magnesium chelatase, subunit ChlI C-terminal KBP48_02440 PF01078 Magnesium chelatase, subunit ChlI KBP48_02445 PF00561 alpha/beta hydrolase fold KBP48_02460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KBP48_02460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KBP48_02460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KBP48_02475 PF05698 Bacterial trigger factor protein (TF) C-terminus KBP48_02475 PF05697 Bacterial trigger factor protein (TF) KBP48_02480 PF00574 Clp protease KBP48_02485 PF07724 AAA domain (Cdc48 subfamily) KBP48_02485 PF06689 ClpX C4-type zinc finger KBP48_02485 PF10431 C-terminal, D2-small domain, of ClpB protein KBP48_02490 PF02190 ATP-dependent protease La (LON) substrate-binding domain KBP48_02490 PF05362 Lon protease (S16) C-terminal proteolytic domain KBP48_02490 PF00004 ATPase family associated with various cellular activities (AAA) KBP48_02495 PF00216 Bacterial DNA-binding protein KBP48_02520 PF02867 Ribonucleotide reductase, barrel domain KBP48_02520 PF03477 ATP cone domain KBP48_02520 PF00317 Ribonucleotide reductase, all-alpha domain KBP48_02525 PF00268 Ribonucleotide reductase, small chain KBP48_02540 PF00849 RNA pseudouridylate synthase KBP48_02540 PF01479 S4 domain KBP48_02545 PF13419 Haloacid dehalogenase-like hydrolase KBP48_02555 PF00830 Ribosomal L28 family KBP48_02560 PF00471 Ribosomal protein L33 KBP48_02565 PF13396 Phospholipase_D-nuclease N-terminal KBP48_02565 PF13091 PLD-like domain KBP48_02570 PF02798 Glutathione S-transferase, N-terminal domain KBP48_02570 PF00043 Glutathione S-transferase, C-terminal domain KBP48_02575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KBP48_02575 PF00056 lactate/malate dehydrogenase, NAD binding domain KBP48_02580 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KBP48_02585 PF00679 Elongation factor G C-terminus KBP48_02585 PF03144 Elongation factor Tu domain 2 KBP48_02585 PF00009 Elongation factor Tu GTP binding domain KBP48_02595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KBP48_02595 PF00529 HlyD membrane-fusion protein of T1SS KBP48_02620 PF03412 Peptidase C39 family KBP48_02620 PF00005 ABC transporter KBP48_02620 PF00664 ABC transporter transmembrane region KBP48_02625 PF01061 ABC-2 type transporter KBP48_02630 PF00005 ABC transporter KBP48_02635 PF05567 Neisseria PilC beta-propeller domain KBP48_02650 PF08482 ATP-dependent helicase C-terminal KBP48_02650 PF00271 Helicase conserved C-terminal domain KBP48_02650 PF04408 Helicase associated domain (HA2) KBP48_02650 PF00270 DEAD/DEAH box helicase KBP48_02665 PF13185 GAF domain KBP48_02675 PF17243 POTRA domain TamA domain 1 KBP48_02675 PF01103 Surface antigen KBP48_02680 PF04357 TamB, inner membrane protein subunit of TAM complex KBP48_02690 PF00589 Phage integrase family KBP48_02780 PF00694 Aconitase C-terminal domain KBP48_02780 PF00330 Aconitase family (aconitate hydratase) KBP48_02785 PF04303 PrpF protein KBP48_02810 PF00207 Alpha-2-macroglobulin family KBP48_02810 PF07703 Alpha-2-macroglobulin bait region domain KBP48_02810 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain KBP48_02810 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain KBP48_02810 PF11974 Bacterial alpha-2-macroglobulin MG3 domain KBP48_02810 PF01835 MG2 domain KBP48_02810 PF17962 Bacterial macroglobulin domain 6 KBP48_02810 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain KBP48_02815 PF07859 alpha/beta hydrolase fold KBP48_02820 PF12833 Helix-turn-helix domain KBP48_02820 PF12852 Cupin KBP48_02830 PF00929 Exonuclease KBP48_02835 PF05552 Conserved TM helix KBP48_02835 PF00924 Mechanosensitive ion channel KBP48_02840 PF02896 PEP-utilising enzyme, TIM barrel domain KBP48_02840 PF00391 PEP-utilising enzyme, mobile domain KBP48_02840 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KBP48_02845 PF03618 Kinase/pyrophosphorylase KBP48_02865 PF01341 Glycosyl hydrolases family 6 KBP48_02865 PF00041 Fibronectin type III domain KBP48_02865 PF00553 Cellulose binding domain KBP48_02870 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KBP48_02870 PF04055 Radical SAM superfamily KBP48_02875 PF03099 Biotin/lipoate A/B protein ligase family KBP48_02880 PF04359 Protein of unknown function (DUF493) KBP48_02905 PF04286 Protein of unknown function (DUF445) KBP48_02910 PF03471 Transporter associated domain KBP48_02910 PF00571 CBS domain KBP48_02910 PF01595 Cyclin M transmembrane N-terminal domain KBP48_02925 PF00204 DNA gyrase B KBP48_02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_02925 PF01751 Toprim domain KBP48_02925 PF00986 DNA gyrase B subunit, carboxyl terminus KBP48_02935 PF00117 Glutamine amidotransferase class-I KBP48_02935 PF06418 CTP synthase N-terminus KBP48_02940 PF00793 DAHP synthetase I family KBP48_02945 PF00113 Enolase, C-terminal TIM barrel domain KBP48_02945 PF03952 Enolase, N-terminal domain KBP48_02950 PF04977 Septum formation initiator KBP48_02955 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KBP48_02960 PF02542 YgbB family KBP48_02965 PF01713 Smr domain KBP48_02990 PF03886 ABC-type transport auxiliary lipoprotein component KBP48_02990 PF02470 MlaD protein KBP48_02995 PF00005 ABC transporter KBP48_03000 PF02405 Permease MlaE KBP48_03060 PF00436 Single-strand binding protein family KBP48_03080 PF07963 Prokaryotic N-terminal methylation motif KBP48_03180 PF00239 Resolvase, N terminal domain KBP48_03220 PF00239 Resolvase, N terminal domain KBP48_03225 PF12323 Helix-turn-helix domain KBP48_03225 PF01385 Probable transposase KBP48_03225 PF07282 Putative transposase DNA-binding domain KBP48_03230 PF00239 Resolvase, N terminal domain KBP48_03230 PF02796 Helix-turn-helix domain of resolvase KBP48_03240 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH KBP48_03290 PF01522 Polysaccharide deacetylase KBP48_03295 PF00462 Glutaredoxin KBP48_03315 PF08240 Alcohol dehydrogenase GroES-like domain KBP48_03315 PF00107 Zinc-binding dehydrogenase KBP48_03325 PF00873 AcrB/AcrD/AcrF family KBP48_03330 PF00873 AcrB/AcrD/AcrF family KBP48_03335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KBP48_03340 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KBP48_03340 PF14489 QueF-like protein KBP48_03355 PF00330 Aconitase family (aconitate hydratase) KBP48_03360 PF00694 Aconitase C-terminal domain KBP48_03365 PF00180 Isocitrate/isopropylmalate dehydrogenase KBP48_03380 PF02397 Bacterial sugar transferase KBP48_03395 PF13439 Glycosyltransferase Family 4 KBP48_03395 PF00534 Glycosyl transferases group 1 KBP48_03400 PF14667 Polysaccharide biosynthesis C-terminal domain KBP48_03410 PF03808 Glycosyl transferase WecB/TagA/CpsF family KBP48_03415 PF00486 Transcriptional regulatory protein, C terminal KBP48_03415 PF00072 Response regulator receiver domain KBP48_03420 PF05958 tRNA (Uracil-5-)-methyltransferase KBP48_03425 PF01928 CYTH domain KBP48_03430 PF00933 Glycosyl hydrolase family 3 N terminal domain KBP48_03435 PF00156 Phosphoribosyl transferase domain KBP48_03440 PF01048 Phosphorylase superfamily KBP48_03445 PF00313 'Cold-shock' DNA-binding domain KBP48_03455 PF01668 SmpB protein KBP48_03465 PF03658 RnfH family Ubiquitin KBP48_03470 PF04355 SmpA / OmlA family KBP48_03475 PF01475 Ferric uptake regulator family KBP48_03480 PF13476 AAA domain KBP48_03480 PF02463 RecF/RecN/SMC N terminal domain KBP48_03485 PF01628 HrcA protein C terminal domain KBP48_03485 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding KBP48_03490 PF01025 GrpE KBP48_03495 PF00012 Hsp70 protein KBP48_03500 PF00226 DnaJ domain KBP48_03500 PF01556 DnaJ C terminal domain KBP48_03500 PF00684 DnaJ central domain KBP48_03505 PF01817 Chorismate mutase type II KBP48_03505 PF02153 Prephenate dehydrogenase KBP48_03515 PF00072 Response regulator receiver domain KBP48_03515 PF00486 Transcriptional regulatory protein, C terminal KBP48_03520 PF01219 Prokaryotic diacylglycerol kinase KBP48_03525 PF01790 Prolipoprotein diacylglyceryl transferase KBP48_03530 PF00303 Thymidylate synthase KBP48_03535 PF00186 Dihydrofolate reductase KBP48_03545 PF00005 ABC transporter KBP48_03550 PF12679 ABC-2 family transporter protein KBP48_03560 PF00266 Aminotransferase class-V KBP48_03565 PF00800 Prephenate dehydratase KBP48_03565 PF01817 Chorismate mutase type II KBP48_03565 PF01842 ACT domain KBP48_03570 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KBP48_03615 PF00959 Phage lysozyme KBP48_03620 PF01555 DNA methylase KBP48_03660 PF03544 Gram-negative bacterial TonB protein C-terminal KBP48_03665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KBP48_03665 PF02403 Seryl-tRNA synthetase N-terminal domain KBP48_03675 PF13614 AAA domain KBP48_03680 PF02195 ParB-like nuclease domain KBP48_03680 PF17762 HTH domain found in ParB protein KBP48_03685 PF01370 NAD dependent epimerase/dehydratase family KBP48_03690 PF00535 Glycosyl transferase family 2 KBP48_03700 PF00501 AMP-binding enzyme KBP48_03705 PF00857 Isochorismatase family KBP48_03710 PF02677 Epoxyqueuosine reductase QueH KBP48_03715 PF01717 Cobalamin-independent synthase, Catalytic domain KBP48_03715 PF08267 Cobalamin-independent synthase, N-terminal domain KBP48_03720 PF01263 Aldose 1-epimerase KBP48_03730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KBP48_03730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KBP48_03735 PF00230 Major intrinsic protein KBP48_03740 PF01266 FAD dependent oxidoreductase KBP48_03740 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KBP48_03750 PF03169 OPT oligopeptide transporter protein KBP48_03755 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KBP48_03755 PF07676 WD40-like Beta Propeller Repeat KBP48_03755 PF00326 Prolyl oligopeptidase family KBP48_03770 PF02659 Putative manganese efflux pump KBP48_03775 PF16177 Acetyl-coenzyme A synthetase N-terminus KBP48_03775 PF00501 AMP-binding enzyme KBP48_03775 PF13193 AMP-binding enzyme C-terminal domain KBP48_03785 PF00474 Sodium:solute symporter family KBP48_03790 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KBP48_03790 PF02779 Transketolase, pyrimidine binding domain KBP48_03790 PF02780 Transketolase, C-terminal domain KBP48_03795 PF02565 Recombination protein O C terminal KBP48_03795 PF11967 Recombination protein O N terminal KBP48_03800 PF07650 KH domain KBP48_03800 PF01926 50S ribosome-binding GTPase KBP48_03805 PF00035 Double-stranded RNA binding motif KBP48_03805 PF14622 Ribonuclease-III-like KBP48_03815 PF10502 Signal peptidase, peptidase S26 KBP48_03820 PF00679 Elongation factor G C-terminus KBP48_03820 PF00009 Elongation factor Tu GTP binding domain KBP48_03820 PF03144 Elongation factor Tu domain 2 KBP48_03820 PF06421 GTP-binding protein LepA C-terminus KBP48_03825 PF13180 PDZ domain KBP48_03835 PF08281 Sigma-70, region 4 KBP48_03835 PF04542 Sigma-70 region 2 KBP48_03840 PF07715 TonB-dependent Receptor Plug Domain KBP48_03840 PF00593 TonB dependent receptor KBP48_03850 PF00905 Penicillin binding protein transpeptidase domain KBP48_03850 PF00912 Transglycosylase KBP48_03850 PF06832 Penicillin-Binding Protein C-terminus Family KBP48_03860 PF00226 DnaJ domain KBP48_03860 PF01556 DnaJ C terminal domain KBP48_03865 PF00141 Peroxidase KBP48_03875 PF00768 D-alanyl-D-alanine carboxypeptidase KBP48_03875 PF07943 Penicillin-binding protein 5, C-terminal domain KBP48_03880 PF02622 Uncharacterized ACR, COG1678 KBP48_03885 PF03652 Holliday junction resolvase KBP48_03890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KBP48_03890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KBP48_03895 PF03447 Homoserine dehydrogenase, NAD binding domain KBP48_03895 PF00742 Homoserine dehydrogenase KBP48_03895 PF01842 ACT domain KBP48_03895 PF13840 ACT domain KBP48_03895 PF00696 Amino acid kinase family KBP48_03900 PF00288 GHMP kinases N terminal domain KBP48_03900 PF08544 GHMP kinases C terminal KBP48_03905 PF00291 Pyridoxal-phosphate dependent enzyme KBP48_03905 PF14821 Threonine synthase N terminus KBP48_03915 PF03129 Anticodon binding domain KBP48_03915 PF13393 Histidyl-tRNA synthetase KBP48_03925 PF01634 ATP phosphoribosyltransferase KBP48_03925 PF08029 HisG, C-terminal domain KBP48_03930 PF00815 Histidinol dehydrogenase KBP48_03935 PF00155 Aminotransferase class I and II KBP48_03940 PF00475 Imidazoleglycerol-phosphate dehydratase KBP48_03945 PF00117 Glutamine amidotransferase class-I KBP48_03950 PF00977 Histidine biosynthesis protein KBP48_03955 PF00977 Histidine biosynthesis protein KBP48_03960 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KBP48_03960 PF01502 Phosphoribosyl-AMP cyclohydrolase KBP48_03970 PF03079 ARD/ARD' family KBP48_03975 PF00596 Class II Aldolase and Adducin N-terminal domain KBP48_03980 PF13520 Amino acid permease KBP48_03985 PF13520 Amino acid permease KBP48_03990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KBP48_03990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KBP48_03990 PF01842 ACT domain KBP48_03995 PF01565 FAD binding domain KBP48_03995 PF02913 FAD linked oxidases, C-terminal domain KBP48_04000 PF09285 Elongation factor P, C-terminal KBP48_04000 PF08207 Elongation factor P (EF-P) KOW-like domain KBP48_04000 PF01132 Elongation factor P (EF-P) OB domain KBP48_04035 PF13018 Extended Signal Peptide of Type V secretion system KBP48_04035 PF04829 Pre-toxin domain with VENN motif KBP48_04035 PF13332 Hemagglutinin repeat KBP48_04035 PF05860 haemagglutination activity domain KBP48_04275 PF03330 Lytic transglycolase KBP48_04275 PF05036 Sporulation related domain KBP48_04280 PF13406 Transglycosylase SLT domain KBP48_04305 PF01467 Cytidylyltransferase-like KBP48_04320 PF00133 tRNA synthetases class I (I, L, M and V) KBP48_04320 PF08264 Anticodon-binding domain of tRNA KBP48_04320 PF13603 Leucyl-tRNA synthetase, Domain 2 KBP48_04330 PF00085 Thioredoxin KBP48_04335 PF00719 Inorganic pyrophosphatase KBP48_04350 PF00575 S1 RNA binding domain KBP48_04350 PF09371 Tex-like protein N-terminal domain KBP48_04350 PF16921 Tex protein YqgF-like domain KBP48_04350 PF17674 HHH domain KBP48_04365 PF16123 Hydroxyacylglutathione hydrolase C-terminus KBP48_04365 PF00753 Metallo-beta-lactamase superfamily KBP48_04375 PF00075 RNase H KBP48_04380 PF00929 Exonuclease KBP48_04400 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KBP48_04415 PF00149 Calcineurin-like phosphoesterase KBP48_04420 PF04379 ApaG domain KBP48_04425 PF00398 Ribosomal RNA adenine dimethylase KBP48_04430 PF00929 Exonuclease KBP48_04435 PF01895 PhoU domain KBP48_04440 PF00005 ABC transporter KBP48_04445 PF00528 Binding-protein-dependent transport system inner membrane component KBP48_04450 PF00528 Binding-protein-dependent transport system inner membrane component KBP48_04455 PF12849 PBP superfamily domain KBP48_04460 PF00999 Sodium/hydrogen exchanger family KBP48_04460 PF02254 TrkA-N domain KBP48_04465 PF07715 TonB-dependent Receptor Plug Domain KBP48_04465 PF00593 TonB dependent receptor KBP48_04475 PF00593 TonB dependent receptor KBP48_04475 PF07715 TonB-dependent Receptor Plug Domain KBP48_04480 PF00005 ABC transporter KBP48_04480 PF12848 ABC transporter KBP48_04545 PF01451 Low molecular weight phosphotyrosine protein phosphatase KBP48_04550 PF02348 Cytidylyltransferase KBP48_04555 PF10609 NUBPL iron-transfer P-loop NTPase KBP48_04560 PF00202 Aminotransferase class-III KBP48_04575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KBP48_04580 PF00490 Delta-aminolevulinic acid dehydratase KBP48_04600 PF01066 CDP-alcohol phosphatidyltransferase KBP48_04605 PF02151 UvrB/uvrC motif KBP48_04605 PF08459 UvrC Helix-hairpin-helix N-terminal KBP48_04605 PF01541 GIY-YIG catalytic domain KBP48_04620 PF01555 DNA methylase KBP48_04625 PF00959 Phage lysozyme KBP48_04655 PF06381 Protein of unknown function (DUF1073) KBP48_04670 PF04233 Phage Mu protein F like protein KBP48_04695 PF10876 Phage tail assemb.y chaperone protein, TAC KBP48_04740 PF01381 Helix-turn-helix KBP48_04745 PF05973 Phage derived protein Gp49-like (DUF891) KBP48_04775 PF00005 ABC transporter KBP48_04780 PF00255 Glutathione peroxidase KBP48_04785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KBP48_04785 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KBP48_04790 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KBP48_04790 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KBP48_04790 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KBP48_04795 PF04102 SlyX KBP48_04805 PF07690 Major Facilitator Superfamily KBP48_04810 PF00294 pfkB family carbohydrate kinase KBP48_04825 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KBP48_04840 PF01209 ubiE/COQ5 methyltransferase family KBP48_04855 PF13632 Glycosyl transferase family group 2 KBP48_04860 PF02230 Phospholipase/Carboxylesterase KBP48_04865 PF07694 5TMR of 5TMR-LYT KBP48_04865 PF06580 Histidine kinase KBP48_04870 PF04397 LytTr DNA-binding domain KBP48_04870 PF00072 Response regulator receiver domain KBP48_04875 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KBP48_04875 PF03900 Porphobilinogen deaminase, C-terminal domain KBP48_04890 PF00437 Type II/IV secretion system protein KBP48_04895 PF00437 Type II/IV secretion system protein KBP48_04910 PF00535 Glycosyl transferase family 2 KBP48_04920 PF00109 Beta-ketoacyl synthase, N-terminal domain KBP48_04920 PF02801 Beta-ketoacyl synthase, C-terminal domain KBP48_04930 PF09924 Uncharacterised conserved protein (DUF2156) KBP48_04930 PF03706 Lysylphosphatidylglycerol synthase TM region KBP48_04935 PF02899 Phage integrase, N-terminal SAM-like domain KBP48_04935 PF00589 Phage integrase family KBP48_04970 PF10548 P22AR C-terminal domain KBP48_04970 PF02498 BRO family, N-terminal domain KBP48_05060 PF01555 DNA methylase KBP48_05065 PF00959 Phage lysozyme KBP48_05165 PF01042 Endoribonuclease L-PSP KBP48_05180 PF01430 Hsp33 protein KBP48_05185 PF00912 Transglycosylase KBP48_05190 PF01624 MutS domain I KBP48_05190 PF05188 MutS domain II KBP48_05190 PF05192 MutS domain III KBP48_05190 PF05190 MutS family domain IV KBP48_05190 PF00488 MutS domain V KBP48_05195 PF01168 Alanine racemase, N-terminal domain KBP48_05230 PF03309 Type III pantothenate kinase KBP48_05235 PF03099 Biotin/lipoate A/B protein ligase family KBP48_05235 PF08279 HTH domain KBP48_05235 PF02237 Biotin protein ligase C terminal domain KBP48_05260 PF00581 Rhodanese-like domain KBP48_05265 PF02556 Preprotein translocase subunit SecB KBP48_05270 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KBP48_05270 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KBP48_05300 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KBP48_05300 PF12170 DNA polymerase III tau subunit V interacting with alpha KBP48_05300 PF12169 DNA polymerase III subunits gamma and tau domain III KBP48_05305 PF02575 YbaB/EbfC DNA-binding family KBP48_05310 PF02132 RecR protein KBP48_05310 PF13662 Toprim domain KBP48_05315 PF01230 HIT domain KBP48_05325 PF11992 Domain of unknown function (DUF3488) KBP48_05325 PF13559 Domain of unknown function (DUF4129) KBP48_05325 PF01841 Transglutaminase-like superfamily KBP48_05335 PF07726 ATPase family associated with various cellular activities (AAA) KBP48_05335 PF17863 AAA lid domain KBP48_05345 PF02620 Large ribosomal RNA subunit accumulation protein YceD KBP48_05350 PF01783 Ribosomal L32p protein family KBP48_05355 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KBP48_05355 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KBP48_05360 PF00682 HMGL-like KBP48_05360 PF08502 LeuA allosteric (dimerisation) domain KBP48_05365 PF00291 Pyridoxal-phosphate dependent enzyme KBP48_05375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KBP48_05375 PF00205 Thiamine pyrophosphate enzyme, central domain KBP48_05375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KBP48_05380 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KBP48_05380 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KBP48_05385 PF11818 C-terminal domain of tail specific protease (DUF3340) KBP48_05385 PF00595 PDZ domain KBP48_05385 PF03572 Peptidase family S41 KBP48_05385 PF17804 Tail specific protease N-terminal domain KBP48_05390 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KBP48_05395 PF02566 OsmC-like protein KBP48_05400 PF03969 AFG1-like ATPase KBP48_05410 PF02492 CobW/HypB/UreG, nucleotide-binding domain KBP48_05410 PF07683 Cobalamin synthesis protein cobW C-terminal domain KBP48_05415 PF00551 Formyl transferase KBP48_05425 PF03109 ABC1 family KBP48_05435 PF07055 Enoyl reductase FAD binding domain KBP48_05435 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KBP48_05435 PF12241 Trans-2-enoyl-CoA reductase catalytic region KBP48_05455 PF04264 YceI-like domain KBP48_05460 PF02673 Bacitracin resistance protein BacA KBP48_05465 PF03951 Glutamine synthetase, beta-Grasp domain KBP48_05465 PF00120 Glutamine synthetase, catalytic domain KBP48_05470 PF00543 Nitrogen regulatory protein P-II KBP48_05475 PF00909 Ammonium Transporter Family KBP48_05490 PF00158 Sigma-54 interaction domain KBP48_05490 PF02954 Bacterial regulatory protein, Fis family KBP48_05490 PF00072 Response regulator receiver domain KBP48_05495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_05495 PF00512 His Kinase A (phospho-acceptor) domain KBP48_05495 PF00989 PAS fold KBP48_05510 PF12951 Passenger-associated-transport-repeat KBP48_05510 PF00082 Subtilase family KBP48_05510 PF03797 Autotransporter beta-domain KBP48_05535 PF05683 Fumarase C-terminus KBP48_05535 PF05681 Fumarate hydratase (Fumerase) KBP48_05540 PF00152 tRNA synthetases class II (D, K and N) KBP48_05540 PF01336 OB-fold nucleic acid binding domain KBP48_05540 PF02938 GAD domain KBP48_05545 PF06508 Queuosine biosynthesis protein QueC KBP48_05610 PF00589 Phage integrase family KBP48_05615 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KBP48_05705 PF00300 Histidine phosphatase superfamily (branch 1) KBP48_05710 PF10459 Peptidase S46 KBP48_05715 PF01964 Radical SAM ThiC family KBP48_05715 PF13667 ThiC-associated domain KBP48_05720 PF00970 Oxidoreductase FAD-binding domain KBP48_05720 PF00175 Oxidoreductase NAD-binding domain KBP48_05725 PF00255 Glutathione peroxidase KBP48_05730 PF00854 POT family KBP48_05735 PF04493 Endonuclease V KBP48_05740 PF00300 Histidine phosphatase superfamily (branch 1) KBP48_05745 PF04055 Radical SAM superfamily KBP48_05755 PF00691 OmpA family KBP48_05760 PF07676 WD40-like Beta Propeller Repeat KBP48_05760 PF04052 TolB amino-terminal domain KBP48_05770 PF02472 Biopolymer transport protein ExbD/TolR KBP48_05775 PF01618 MotA/TolQ/ExbB proton channel family KBP48_05780 PF03061 Thioesterase superfamily KBP48_05785 PF17864 RuvB AAA lid domain KBP48_05785 PF05491 RuvB C-terminal winged helix domain KBP48_05785 PF05496 Holliday junction DNA helicase RuvB P-loop domain KBP48_05790 PF02705 K+ potassium transporter KBP48_05795 PF07499 RuvA, C-terminal domain KBP48_05795 PF01330 RuvA N terminal domain KBP48_05800 PF02075 Crossover junction endodeoxyribonuclease RuvC KBP48_05805 PF01709 Transcriptional regulator KBP48_05815 PF04362 Bacterial Fe(2+) trafficking KBP48_05820 PF14815 NUDIX domain KBP48_05820 PF00633 Helix-hairpin-helix motif KBP48_05820 PF00730 HhH-GPD superfamily base excision DNA repair protein KBP48_05825 PF00448 SRP54-type protein, GTPase domain KBP48_05825 PF02881 SRP54-type protein, helical bundle domain KBP48_05840 PF01026 TatD related DNase KBP48_05845 PF04715 Anthranilate synthase component I, N terminal region KBP48_05845 PF00425 chorismate binding enzyme KBP48_05865 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KBP48_05865 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KBP48_05870 PF02445 Quinolinate synthetase A protein KBP48_05875 PF02910 Fumarate reductase flavoprotein C-term KBP48_05875 PF00890 FAD binding domain KBP48_05880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KBP48_05880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KBP48_05900 PF01648 4'-phosphopantetheinyl transferase superfamily KBP48_05905 PF02527 rRNA small subunit methyltransferase G KBP48_05910 PF02780 Transketolase, C-terminal domain KBP48_05910 PF00456 Transketolase, thiamine diphosphate binding domain KBP48_05910 PF02779 Transketolase, pyrimidine binding domain KBP48_05915 PF00375 Sodium:dicarboxylate symporter family KBP48_05920 PF01625 Peptide methionine sulfoxide reductase KBP48_05935 PF01432 Peptidase family M3 KBP48_05945 PF08245 Mur ligase middle domain KBP48_05945 PF02875 Mur ligase family, glutamate ligase domain KBP48_05960 PF00156 Phosphoribosyl transferase domain KBP48_05975 PF00072 Response regulator receiver domain KBP48_05975 PF01627 Hpt domain KBP48_05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_05975 PF02895 Signal transducing histidine kinase, homodimeric domain KBP48_05975 PF01584 CheW-like domain KBP48_05980 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KBP48_05980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KBP48_05985 PF01584 CheW-like domain KBP48_05990 PF00072 Response regulator receiver domain KBP48_05995 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KBP48_05995 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KBP48_06010 PF02092 Glycyl-tRNA synthetase beta subunit KBP48_06010 PF05746 DALR anticodon binding domain KBP48_06015 PF02091 Glycyl-tRNA synthetase alpha subunit KBP48_06020 PF02540 NAD synthase KBP48_06020 PF00795 Carbon-nitrogen hydrolase KBP48_06025 PF03692 Putative zinc- or iron-chelating domain KBP48_06030 PF00561 alpha/beta hydrolase fold KBP48_06040 PF18273 Type III R-M EcoP15I C-terminal domain KBP48_06040 PF01555 DNA methylase KBP48_06045 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KBP48_06045 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KBP48_06055 PF00588 SpoU rRNA Methylase family KBP48_06060 PF02142 MGS-like domain KBP48_06060 PF01808 AICARFT/IMPCHase bienzyme KBP48_06065 PF02844 Phosphoribosylglycinamide synthetase, N domain KBP48_06065 PF02843 Phosphoribosylglycinamide synthetase, C domain KBP48_06065 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KBP48_06070 PF12805 FUSC-like inner membrane protein yccS KBP48_06075 PF03186 CobD/Cbib protein KBP48_06080 PF05658 Head domain of trimeric autotransporter adhesin KBP48_06080 PF05662 Coiled stalk of trimeric autotransporter adhesin KBP48_06080 PF03895 YadA-like membrane anchor domain KBP48_06085 PF01227 GTP cyclohydrolase I KBP48_06090 PF00132 Bacterial transferase hexapeptide (six repeats) KBP48_06095 PF00588 SpoU rRNA Methylase family KBP48_06095 PF08032 RNA 2'-O ribose methyltransferase substrate binding KBP48_06100 PF00575 S1 RNA binding domain KBP48_06100 PF00773 RNB domain KBP48_06100 PF17876 Cold shock domain KBP48_06100 PF08206 Ribonuclease B OB domain KBP48_06100 PF08461 Ribonuclease R winged-helix domain KBP48_06110 PF00578 AhpC/TSA family KBP48_06115 PF00925 GTP cyclohydrolase II KBP48_06125 PF00535 Glycosyl transferase family 2 KBP48_06135 PF01381 Helix-turn-helix KBP48_06145 PF02954 Bacterial regulatory protein, Fis family KBP48_06150 PF01063 Amino-transferase class IV KBP48_06185 PF00881 Nitroreductase family KBP48_06190 PF00293 NUDIX domain KBP48_06195 PF00557 Metallopeptidase family M24 KBP48_06195 PF05195 Aminopeptidase P, N-terminal domain KBP48_06200 PF03695 Uncharacterised protein family (UPF0149) KBP48_06210 PF05164 Cell division protein ZapA KBP48_06220 PF01812 5-formyltetrahydrofolate cyclo-ligase family KBP48_06230 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KBP48_06240 PF00999 Sodium/hydrogen exchanger family KBP48_06250 PF00929 Exonuclease KBP48_06250 PF08411 Exonuclease C-terminal KBP48_06260 PF12706 Beta-lactamase superfamily domain KBP48_06290 PF00933 Glycosyl hydrolase family 3 N terminal domain KBP48_06290 PF01915 Glycosyl hydrolase family 3 C-terminal domain KBP48_06305 PF00873 AcrB/AcrD/AcrF family KBP48_06315 PF00440 Bacterial regulatory proteins, tetR family KBP48_06335 PF01513 ATP-NAD kinase KBP48_06340 PF05088 Bacterial NAD-glutamate dehydrogenase KBP48_06345 PF00529 HlyD membrane-fusion protein of T1SS KBP48_06345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KBP48_06350 PF00873 AcrB/AcrD/AcrF family KBP48_06355 PF00132 Bacterial transferase hexapeptide (six repeats) KBP48_06360 PF02649 Type I GTP cyclohydrolase folE2 KBP48_06365 PF13649 Methyltransferase domain KBP48_06385 PF13932 GidA associated domain KBP48_06385 PF01134 Glucose inhibited division protein A KBP48_06425 PF01555 DNA methylase KBP48_06430 PF00959 Phage lysozyme KBP48_06435 PF07282 Putative transposase DNA-binding domain KBP48_06435 PF01385 Probable transposase KBP48_06435 PF12323 Helix-turn-helix domain KBP48_06440 PF00239 Resolvase, N terminal domain KBP48_06460 PF07963 Prokaryotic N-terminal methylation motif KBP48_06460 PF00114 Pilin (bacterial filament) KBP48_06475 PF00206 Lyase KBP48_06475 PF10415 Fumarase C C-terminus KBP48_06480 PF00206 Lyase KBP48_06480 PF08328 Adenylosuccinate lyase C-terminal KBP48_06485 PF08007 Cupin superfamily protein KBP48_06490 PF02779 Transketolase, pyrimidine binding domain KBP48_06490 PF16870 2-oxoglutarate dehydrogenase C-terminal KBP48_06490 PF16078 2-oxoglutarate dehydrogenase N-terminus KBP48_06490 PF00676 Dehydrogenase E1 component KBP48_06495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KBP48_06495 PF02817 e3 binding domain KBP48_06495 PF00364 Biotin-requiring enzyme KBP48_06505 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBP48_06505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KBP48_06515 PF00899 ThiF family KBP48_06540 PF00325 Bacterial regulatory proteins, crp family KBP48_06540 PF00027 Cyclic nucleotide-binding domain KBP48_06545 PF02675 S-adenosylmethionine decarboxylase KBP48_06550 PF03232 Ubiquinone biosynthesis protein COQ7 KBP48_06555 PF00572 Ribosomal protein L13 KBP48_06560 PF00380 Ribosomal protein S9/S16 KBP48_06565 PF00285 Citrate synthase, C-terminal domain KBP48_06570 PF01197 Ribosomal protein L31 KBP48_06575 PF00814 Glycoprotease family KBP48_06580 PF03466 LysR substrate binding domain KBP48_06580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBP48_06585 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBP48_06585 PF13192 Thioredoxin domain KBP48_06590 PF00578 AhpC/TSA family KBP48_06590 PF10417 C-terminal domain of 1-Cys peroxiredoxin KBP48_06595 PF05658 Head domain of trimeric autotransporter adhesin KBP48_06595 PF05662 Coiled stalk of trimeric autotransporter adhesin KBP48_06595 PF03895 YadA-like membrane anchor domain KBP48_06600 PF00263 Bacterial type II and III secretion system protein KBP48_06600 PF03958 Bacterial type II/III secretion system short domain KBP48_06610 PF10741 Type II secretion system (T2SS), protein M subtype b KBP48_06615 PF05137 Fimbrial assembly protein (PilN) KBP48_06620 PF03934 Type II secretion system (T2SS), protein K KBP48_06630 PF07963 Prokaryotic N-terminal methylation motif KBP48_06635 PF12019 Type II transport protein GspH KBP48_06640 PF08334 Type II secretion system (T2SS), protein G KBP48_06645 PF00482 Type II secretion system (T2SS), protein F KBP48_06650 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KBP48_06650 PF00437 Type II/IV secretion system protein KBP48_06655 PF13018 Extended Signal Peptide of Type V secretion system KBP48_06655 PF03895 YadA-like membrane anchor domain KBP48_06655 PF05662 Coiled stalk of trimeric autotransporter adhesin KBP48_06655 PF05658 Head domain of trimeric autotransporter adhesin KBP48_06670 PF17827 PrmC N-terminal domain KBP48_06670 PF05175 Methyltransferase small domain KBP48_06675 PF00561 alpha/beta hydrolase fold KBP48_06690 PF04055 Radical SAM superfamily KBP48_06690 PF06969 HemN C-terminal domain KBP48_06695 PF01725 Ham1 family KBP48_06700 PF01138 3' exoribonuclease family, domain 1 KBP48_06700 PF03725 3' exoribonuclease family, domain 2 KBP48_06705 PF03755 YicC-like family, N-terminal region KBP48_06705 PF08340 Domain of unknown function (DUF1732) KBP48_06710 PF00625 Guanylate kinase KBP48_06715 PF01192 RNA polymerase Rpb6 KBP48_06720 PF00009 Elongation factor Tu GTP binding domain KBP48_06725 PF01507 Phosphoadenosine phosphosulfate reductase family KBP48_06730 PF00258 Flavodoxin KBP48_06730 PF00175 Oxidoreductase NAD-binding domain KBP48_06730 PF00667 FAD binding domain KBP48_06735 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KBP48_06735 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KBP48_06740 PF01507 Phosphoadenosine phosphosulfate reductase family KBP48_06755 PF13369 Transglutaminase-like superfamily KBP48_06775 PF11838 ERAP1-like C-terminal domain KBP48_06775 PF01433 Peptidase family M1 domain KBP48_06780 PF01209 ubiE/COQ5 methyltransferase family KBP48_06790 PF00004 ATPase family associated with various cellular activities (AAA) KBP48_06790 PF10431 C-terminal, D2-small domain, of ClpB protein KBP48_06790 PF07724 AAA domain (Cdc48 subfamily) KBP48_06795 PF00227 Proteasome subunit KBP48_06800 PF02899 Phage integrase, N-terminal SAM-like domain KBP48_06800 PF00589 Phage integrase family KBP48_06810 PF01678 Diaminopimelate epimerase KBP48_06820 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KBP48_06820 PF00326 Prolyl oligopeptidase family KBP48_06830 PF02082 Transcriptional regulator KBP48_06835 PF01458 Uncharacterized protein family (UPF0051) KBP48_06840 PF00005 ABC transporter KBP48_06845 PF01458 Uncharacterized protein family (UPF0051) KBP48_06850 PF00266 Aminotransferase class-V KBP48_06855 PF00355 Rieske [2Fe-2S] domain KBP48_06865 PF00534 Glycosyl transferases group 1 KBP48_06865 PF13439 Glycosyltransferase Family 4 KBP48_06870 PF01522 Polysaccharide deacetylase KBP48_06875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KBP48_06875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KBP48_06875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KBP48_06875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KBP48_06880 PF17848 Acetyl-coA carboxylase zinc finger domain KBP48_06880 PF01039 Carboxyl transferase domain KBP48_06885 PF01979 Amidohydrolase family KBP48_06890 PF01380 SIS domain KBP48_06895 PF00356 Bacterial regulatory proteins, lacI family KBP48_06900 PF07690 Major Facilitator Superfamily KBP48_06910 PF02685 Glucokinase KBP48_06930 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KBP48_06935 PF00512 His Kinase A (phospho-acceptor) domain KBP48_06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_06940 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KBP48_06945 PF12002 MgsA AAA+ ATPase C terminal KBP48_06945 PF16193 AAA C-terminal domain KBP48_06945 PF00004 ATPase family associated with various cellular activities (AAA) KBP48_06950 PF03548 Outer membrane lipoprotein carrier protein LolA KBP48_06960 PF01580 FtsK/SpoIIIE family KBP48_06960 PF17854 FtsK alpha domain KBP48_06960 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KBP48_06960 PF09397 Ftsk gamma domain KBP48_06965 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBP48_06975 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KBP48_06980 PF01176 Translation initiation factor 1A / IF-1 KBP48_06985 PF10431 C-terminal, D2-small domain, of ClpB protein KBP48_06985 PF02861 Clp amino terminal domain, pathogenicity island component KBP48_06985 PF17871 AAA lid domain KBP48_06985 PF07724 AAA domain (Cdc48 subfamily) KBP48_06985 PF00004 ATPase family associated with various cellular activities (AAA) KBP48_06990 PF02617 ATP-dependent Clp protease adaptor protein ClpS KBP48_06995 PF00293 NUDIX domain KBP48_07005 PF04356 Protein of unknown function (DUF489) KBP48_07015 PF01323 DSBA-like thioredoxin domain KBP48_07020 PF01323 DSBA-like thioredoxin domain KBP48_07035 PF01926 50S ribosome-binding GTPase KBP48_07040 PF04107 Glutamate-cysteine ligase family 2(GCS2) KBP48_07045 PF00202 Aminotransferase class-III KBP48_07050 PF00520 Ion transport protein KBP48_07050 PF00027 Cyclic nucleotide-binding domain KBP48_07055 PF00589 Phage integrase family KBP48_07055 PF02899 Phage integrase, N-terminal SAM-like domain KBP48_07060 PF13098 Thioredoxin-like domain KBP48_07060 PF10411 Disulfide bond isomerase protein N-terminus KBP48_07065 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KBP48_07065 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KBP48_07065 PF02769 AIR synthase related protein, C-terminal domain KBP48_07090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KBP48_07095 PF01722 BolA-like protein KBP48_07100 PF01380 SIS domain KBP48_07100 PF00571 CBS domain KBP48_07120 PF00005 ABC transporter KBP48_07120 PF12399 Branched-chain amino acid ATP-binding cassette transporter KBP48_07125 PF04552 Sigma-54, DNA binding domain KBP48_07125 PF04963 Sigma-54 factor, core binding domain KBP48_07125 PF00309 Sigma-54 factor, Activator interacting domain (AID) KBP48_07130 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KBP48_07135 PF02603 HPr Serine kinase N terminus KBP48_07135 PF07475 HPr Serine kinase C-terminal domain KBP48_07140 PF03668 P-loop ATPase protein family KBP48_07150 PF00381 PTS HPr component phosphorylation site KBP48_07155 PF02896 PEP-utilising enzyme, TIM barrel domain KBP48_07155 PF00391 PEP-utilising enzyme, mobile domain KBP48_07155 PF05524 PEP-utilising enzyme, N-terminal KBP48_07165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KBP48_07180 PF00436 Single-strand binding protein family KBP48_07185 PF00348 Polyprenyl synthetase KBP48_07190 PF06481 COX Aromatic Rich Motif KBP48_07190 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KBP48_07195 PF00115 Cytochrome C and Quinol oxidase polypeptide I KBP48_07200 PF00510 Cytochrome c oxidase subunit III KBP48_07205 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KBP48_07210 PF02347 Glycine cleavage system P-protein KBP48_07220 PF11898 Domain of unknown function (DUF3418) KBP48_07220 PF00270 DEAD/DEAH box helicase KBP48_07220 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KBP48_07220 PF04408 Helicase associated domain (HA2) KBP48_07220 PF00271 Helicase conserved C-terminal domain KBP48_07225 PF00210 Ferritin-like domain KBP48_07230 PF00271 Helicase conserved C-terminal domain KBP48_07230 PF00570 HRDC domain KBP48_07230 PF16124 RecQ zinc-binding KBP48_07230 PF09382 RQC domain KBP48_07230 PF00270 DEAD/DEAH box helicase KBP48_07240 PF00296 Luciferase-like monooxygenase KBP48_07245 PF18073 Rubredoxin metal binding domain KBP48_07250 PF00290 Tryptophan synthase alpha chain KBP48_07255 PF00291 Pyridoxal-phosphate dependent enzyme KBP48_07260 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KBP48_07265 PF01416 tRNA pseudouridine synthase KBP48_07275 PF01118 Semialdehyde dehydrogenase, NAD binding domain KBP48_07275 PF02774 Semialdehyde dehydrogenase, dimerisation domain KBP48_07280 PF01264 Chorismate synthase KBP48_07285 PF05175 Methyltransferase small domain KBP48_07290 PF02630 SCO1/SenC KBP48_07295 PF02666 Phosphatidylserine decarboxylase KBP48_07300 PF14718 Soluble lytic murein transglycosylase L domain KBP48_07300 PF01464 Transglycosylase SLT domain KBP48_07305 PF12627 Probable RNA and SrmB- binding site of polymerase A KBP48_07305 PF01743 Poly A polymerase head domain KBP48_07305 PF01966 HD domain KBP48_07310 PF00753 Metallo-beta-lactamase superfamily KBP48_07315 PF01040 UbiA prenyltransferase family KBP48_07325 PF00155 Aminotransferase class I and II KBP48_07330 PF12697 Alpha/beta hydrolase family KBP48_07340 PF01047 MarR family KBP48_07345 PF00521 DNA gyrase/topoisomerase IV, subunit A KBP48_07345 PF03989 DNA gyrase C-terminal domain, beta-propeller KBP48_07350 PF04546 Sigma-70, non-essential region KBP48_07350 PF04542 Sigma-70 region 2 KBP48_07350 PF04539 Sigma-70 region 3 KBP48_07350 PF04545 Sigma-70, region 4 KBP48_07350 PF03979 Sigma-70 factor, region 1.1 KBP48_07350 PF00140 Sigma-70 factor, region 1.2 KBP48_07360 PF12857 TOBE-like domain KBP48_07360 PF00005 ABC transporter KBP48_07365 PF00528 Binding-protein-dependent transport system inner membrane component KBP48_07370 PF00528 Binding-protein-dependent transport system inner membrane component KBP48_07385 PF03932 CutC family KBP48_07390 PF00749 tRNA synthetases class I (E and Q), catalytic domain KBP48_07390 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KBP48_07395 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KBP48_07395 PF01243 Pyridoxamine 5'-phosphate oxidase KBP48_07400 PF01202 Shikimate kinase KBP48_07405 PF01761 3-dehydroquinate synthase KBP48_07410 PF01208 Uroporphyrinogen decarboxylase (URO-D) KBP48_07415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_07415 PF00512 His Kinase A (phospho-acceptor) domain KBP48_07415 PF00072 Response regulator receiver domain KBP48_07415 PF01627 Hpt domain KBP48_07420 PF04264 YceI-like domain KBP48_07435 PF00730 HhH-GPD superfamily base excision DNA repair protein KBP48_07450 PF03775 Septum formation inhibitor MinC, C-terminal domain KBP48_07450 PF05209 Septum formation inhibitor MinC, N-terminal domain KBP48_07455 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KBP48_07460 PF03776 Septum formation topological specificity factor MinE KBP48_07475 PF13291 ACT domain KBP48_07475 PF02824 TGS domain KBP48_07475 PF04607 Region found in RelA / SpoT proteins KBP48_07480 PF02547 Queuosine biosynthesis protein KBP48_07485 PF01098 Cell cycle protein KBP48_07490 PF00905 Penicillin binding protein transpeptidase domain KBP48_07490 PF03717 Penicillin-binding Protein dimerisation domain KBP48_07495 PF04093 rod shape-determining protein MreD KBP48_07500 PF04085 rod shape-determining protein MreC KBP48_07595 PF00239 Resolvase, N terminal domain KBP48_07600 PF00155 Aminotransferase class I and II KBP48_07605 PF03412 Peptidase C39 family KBP48_07605 PF00664 ABC transporter transmembrane region KBP48_07605 PF00005 ABC transporter KBP48_07630 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) KBP48_07630 PF06594 Haemolysin-type calcium binding protein related domain KBP48_07650 PF02401 LytB protein KBP48_07655 PF01252 Signal peptidase (SPase) II KBP48_07660 PF08264 Anticodon-binding domain of tRNA KBP48_07660 PF00133 tRNA synthetases class I (I, L, M and V) KBP48_07660 PF06827 Zinc finger found in FPG and IleRS KBP48_07665 PF06574 FAD synthetase KBP48_07665 PF01687 Riboflavin kinase KBP48_07670 PF03023 Lipid II flippase MurJ KBP48_07675 PF01649 Ribosomal protein S20 KBP48_07680 PF01926 50S ribosome-binding GTPase KBP48_07680 PF01018 GTP1/OBG KBP48_07685 PF01016 Ribosomal L27 protein KBP48_07690 PF00829 Ribosomal prokaryotic L21 protein KBP48_07695 PF17755 UvrA DNA-binding domain KBP48_07695 PF00005 ABC transporter KBP48_07695 PF17760 UvrA interaction domain KBP48_07705 PF00117 Glutamine amidotransferase class-I KBP48_07705 PF00958 GMP synthase C terminal domain KBP48_07705 PF02540 NAD synthase KBP48_07710 PF00571 CBS domain KBP48_07710 PF00478 IMP dehydrogenase / GMP reductase domain KBP48_07715 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KBP48_07715 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KBP48_07720 PF00483 Nucleotidyl transferase KBP48_07725 PF02719 Polysaccharide biosynthesis protein KBP48_07730 PF00953 Glycosyl transferase family 4 KBP48_07735 PF18073 Rubredoxin metal binding domain KBP48_07745 PF00216 Bacterial DNA-binding protein KBP48_07750 PF00575 S1 RNA binding domain KBP48_07755 PF02224 Cytidylate kinase KBP48_07760 PF00444 Ribosomal protein L36 KBP48_07770 PF04371 Porphyromonas-type peptidyl-arginine deiminase KBP48_07775 PF00795 Carbon-nitrogen hydrolase KBP48_07790 PF00528 Binding-protein-dependent transport system inner membrane component KBP48_07795 PF00528 Binding-protein-dependent transport system inner membrane component KBP48_07815 PF02616 Segregation and condensation protein ScpA KBP48_07820 PF04079 Segregation and condensation complex subunit ScpB KBP48_07825 PF00849 RNA pseudouridylate synthase KBP48_07825 PF01479 S4 domain KBP48_07835 PF00795 Carbon-nitrogen hydrolase KBP48_07840 PF00155 Aminotransferase class I and II KBP48_07845 PF00005 ABC transporter KBP48_07850 PF03379 CcmB protein KBP48_07855 PF01578 Cytochrome C assembly protein KBP48_07865 PF03100 CcmE KBP48_07870 PF01578 Cytochrome C assembly protein KBP48_07870 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KBP48_07875 PF08534 Redoxin KBP48_07880 PF03918 Cytochrome C biogenesis protein KBP48_07895 PF00561 alpha/beta hydrolase fold KBP48_07905 PF00295 Glycosyl hydrolases family 28 KBP48_07920 PF13419 Haloacid dehalogenase-like hydrolase KBP48_07930 PF01979 Amidohydrolase family KBP48_07935 PF09285 Elongation factor P, C-terminal KBP48_07935 PF08207 Elongation factor P (EF-P) KOW-like domain KBP48_07935 PF01132 Elongation factor P (EF-P) OB domain KBP48_07940 PF04055 Radical SAM superfamily KBP48_07945 PF00588 SpoU rRNA Methylase family KBP48_07950 PF00459 Inositol monophosphatase family KBP48_07970 PF09115 DNA polymerase III, delta subunit, C terminal KBP48_07975 PF02618 YceG-like family KBP48_07980 PF00425 chorismate binding enzyme KBP48_07980 PF04715 Anthranilate synthase component I, N terminal region KBP48_07985 PF00109 Beta-ketoacyl synthase, N-terminal domain KBP48_07985 PF02801 Beta-ketoacyl synthase, C-terminal domain KBP48_07990 PF00550 Phosphopantetheine attachment site KBP48_08000 PF00698 Acyl transferase domain KBP48_08005 PF17831 Pyruvate dehydrogenase E1 component middle domain KBP48_08005 PF00456 Transketolase, thiamine diphosphate binding domain KBP48_08010 PF06594 Haemolysin-type calcium binding protein related domain KBP48_08010 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) KBP48_08065 PF00348 Polyprenyl synthetase KBP48_08070 PF02609 Exonuclease VII small subunit KBP48_08075 PF01171 PP-loop family KBP48_08075 PF09179 TilS substrate binding domain KBP48_08075 PF11734 TilS substrate C-terminal domain KBP48_08085 PF00245 Alkaline phosphatase KBP48_08090 PF00375 Sodium:dicarboxylate symporter family KBP48_08100 PF00877 NlpC/P60 family KBP48_08105 PF00877 NlpC/P60 family KBP48_08110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KBP48_08115 PF04235 Protein of unknown function (DUF418) KBP48_08130 PF10576 Iron-sulfur binding domain of endonuclease III KBP48_08130 PF00633 Helix-hairpin-helix motif KBP48_08130 PF00730 HhH-GPD superfamily base excision DNA repair protein KBP48_08140 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KBP48_08140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KBP48_08155 PF01555 DNA methylase KBP48_08240 PF01488 Shikimate / quinate 5-dehydrogenase KBP48_08240 PF08501 Shikimate dehydrogenase substrate binding domain KBP48_08240 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KBP48_08250 PF02581 Thiamine monophosphate synthase KBP48_08250 PF08543 Phosphomethylpyrimidine kinase KBP48_08255 PF02683 Cytochrome C biogenesis protein transmembrane region KBP48_08255 PF11412 Disulphide bond corrector protein DsbC KBP48_08260 PF03091 CutA1 divalent ion tolerance protein KBP48_08265 PF00166 Chaperonin 10 Kd subunit KBP48_08270 PF00118 TCP-1/cpn60 chaperonin family KBP48_08295 PF01370 NAD dependent epimerase/dehydratase family KBP48_08300 PF01370 NAD dependent epimerase/dehydratase family KBP48_08305 PF16363 GDP-mannose 4,6 dehydratase KBP48_08320 PF00291 Pyridoxal-phosphate dependent enzyme KBP48_08340 PF00593 TonB dependent receptor KBP48_08340 PF07715 TonB-dependent Receptor Plug Domain KBP48_08345 PF18331 PKHD-type hydroxylase C-terminal domain KBP48_08345 PF13640 2OG-Fe(II) oxygenase superfamily KBP48_08365 PF02424 ApbE family KBP48_08375 PF01636 Phosphotransferase enzyme family KBP48_08380 PF00483 Nucleotidyl transferase KBP48_08385 PF00308 Bacterial dnaA protein KBP48_08390 PF01594 AI-2E family transporter KBP48_08400 PF02769 AIR synthase related protein, C-terminal domain KBP48_08400 PF00586 AIR synthase related protein, N-terminal domain KBP48_08405 PF00551 Formyl transferase KBP48_08420 PF02223 Thymidylate kinase KBP48_08430 PF05649 Peptidase family M13 KBP48_08430 PF01431 Peptidase family M13 KBP48_08440 PF07977 FabA-like domain KBP48_08445 PF01171 PP-loop family KBP48_08450 PF04381 Putative exonuclease, RdgC KBP48_08460 PF00762 Ferrochelatase KBP48_08470 PF02416 mttA/Hcf106 family KBP48_08475 PF02416 mttA/Hcf106 family KBP48_08480 PF00902 Sec-independent protein translocase protein (TatC) KBP48_08490 PF00117 Glutamine amidotransferase class-I KBP48_08490 PF00958 GMP synthase C terminal domain KBP48_08505 PF00127 Copper binding proteins, plastocyanin/azurin family KBP48_08510 PF03193 RsgA GTPase KBP48_08515 PF02021 Uncharacterised protein family UPF0102 KBP48_08520 PF04348 LppC putative lipoprotein KBP48_08525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KBP48_08530 PF00593 TonB dependent receptor KBP48_08530 PF07715 TonB-dependent Receptor Plug Domain KBP48_08535 PF01588 Putative tRNA binding domain KBP48_08535 PF09334 tRNA synthetases class I (M) KBP48_08540 PF04060 Putative Fe-S cluster KBP48_08615 PF07963 Prokaryotic N-terminal methylation motif KBP48_08615 PF00114 Pilin (bacterial filament) KBP48_08620 PF05567 Neisseria PilC beta-propeller domain KBP48_08640 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KBP48_08640 PF07963 Prokaryotic N-terminal methylation motif KBP48_08645 PF03641 Possible lysine decarboxylase KBP48_08645 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases KBP48_08645 PF11892 Domain of unknown function (DUF3412) KBP48_08650 PF00563 EAL domain KBP48_08650 PF12792 CSS motif domain associated with EAL KBP48_08655 PF00899 ThiF family KBP48_08660 PF01926 50S ribosome-binding GTPase KBP48_08660 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KBP48_08665 PF13360 PQQ-like domain KBP48_08665 PF01011 PQQ enzyme repeat KBP48_08685 PF04055 Radical SAM superfamily KBP48_08690 PF00334 Nucleoside diphosphate kinase KBP48_08695 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KBP48_08695 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KBP48_08700 PF00709 Adenylosuccinate synthetase KBP48_08710 PF01145 SPFH domain / Band 7 family KBP48_08715 PF01145 SPFH domain / Band 7 family KBP48_08715 PF12221 Bacterial membrane protein N terminal KBP48_08720 PF08240 Alcohol dehydrogenase GroES-like domain KBP48_08720 PF00107 Zinc-binding dehydrogenase KBP48_08725 PF00072 Response regulator receiver domain KBP48_08740 PF04073 Aminoacyl-tRNA editing domain KBP48_08740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KBP48_08740 PF03129 Anticodon binding domain KBP48_08750 PF01066 CDP-alcohol phosphatidyltransferase KBP48_08765 PF01915 Glycosyl hydrolase family 3 C-terminal domain KBP48_08765 PF00933 Glycosyl hydrolase family 3 N terminal domain KBP48_08765 PF14310 Fibronectin type III-like domain KBP48_08770 PF00924 Mechanosensitive ion channel KBP48_08775 PF02152 Dihydroneopterin aldolase KBP48_08780 PF00814 Glycoprotease family KBP48_08785 PF01165 Ribosomal protein S21 KBP48_08790 PF09424 Yqey-like protein KBP48_08795 PF03631 Virulence factor BrkB KBP48_08800 PF08275 DNA primase catalytic core, N-terminal domain KBP48_08800 PF08278 DNA primase DnaG DnaB-binding KBP48_08800 PF10410 DnaB-helicase binding domain of primase KBP48_08800 PF01807 CHC2 zinc finger KBP48_08810 PF01555 DNA methylase KBP48_08815 PF00579 tRNA synthetases class I (W and Y) KBP48_08825 PF13538 UvrD-like helicase C-terminal domain KBP48_08835 PF00580 UvrD/REP helicase N-terminal domain KBP48_08835 PF13361 UvrD-like helicase C-terminal domain KBP48_08835 PF12705 PD-(D/E)XK nuclease superfamily KBP48_08840 PF17946 RecC C-terminal domain KBP48_08845 PF00005 ABC transporter KBP48_08850 PF02405 Permease MlaE KBP48_08860 PF05494 MlaC protein KBP48_08870 PF04333 MlaA lipoprotein KBP48_08875 PF02646 RmuC family KBP48_08880 PF00005 ABC transporter KBP48_08890 PF13520 Amino acid permease KBP48_08895 PF10672 S-adenosylmethionine-dependent methyltransferase KBP48_08895 PF17785 PUA-like domain KBP48_08900 PF03741 Integral membrane protein TerC family KBP48_08905 PF01521 Iron-sulphur cluster biosynthesis KBP48_08925 PF00486 Transcriptional regulatory protein, C terminal KBP48_08925 PF00072 Response regulator receiver domain KBP48_08945 PF00210 Ferritin-like domain KBP48_08955 PF00293 NUDIX domain KBP48_08970 PF02773 S-adenosylmethionine synthetase, C-terminal domain KBP48_08970 PF02772 S-adenosylmethionine synthetase, central domain KBP48_08970 PF00438 S-adenosylmethionine synthetase, N-terminal domain KBP48_08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_08980 PF00486 Transcriptional regulatory protein, C terminal KBP48_08980 PF00072 Response regulator receiver domain KBP48_08985 PF01207 Dihydrouridine synthase (Dus) KBP48_08995 PF07715 TonB-dependent Receptor Plug Domain KBP48_08995 PF00593 TonB dependent receptor KBP48_09010 PF00004 ATPase family associated with various cellular activities (AAA) KBP48_09010 PF07724 AAA domain (Cdc48 subfamily) KBP48_09010 PF17871 AAA lid domain KBP48_09010 PF02861 Clp amino terminal domain, pathogenicity island component KBP48_09010 PF10431 C-terminal, D2-small domain, of ClpB protein KBP48_09015 PF00301 Rubredoxin KBP48_09020 PF02581 Thiamine monophosphate synthase KBP48_09025 PF00067 Cytochrome P450 KBP48_09030 PF08019 Phosphoethanolamine transferase EptA/EptB KBP48_09030 PF00884 Sulfatase KBP48_09040 PF07660 Secretin and TonB N terminus short domain KBP48_09040 PF03958 Bacterial type II/III secretion system short domain KBP48_09040 PF00263 Bacterial type II and III secretion system protein KBP48_09040 PF11741 AMIN domain KBP48_09045 PF04351 Pilus assembly protein, PilP KBP48_09050 PF04350 Pilus assembly protein, PilO KBP48_09055 PF05137 Fimbrial assembly protein (PilN) KBP48_09060 PF11104 Type IV pilus assembly protein PilM; KBP48_09065 PF00912 Transglycosylase KBP48_09065 PF17092 Penicillin-binding protein OB-like domain KBP48_09065 PF00905 Penicillin binding protein transpeptidase domain KBP48_09070 PF00248 Aldo/keto reductase family KBP48_09075 PF00294 pfkB family carbohydrate kinase KBP48_09080 PF05736 OprF membrane domain KBP48_09080 PF00691 OmpA family KBP48_09085 PF03796 DnaB-like helicase C terminal domain KBP48_09085 PF00772 DnaB-like helicase N terminal domain KBP48_09095 PF00067 Cytochrome P450 KBP48_09105 PF17191 RecG wedge domain KBP48_09105 PF00271 Helicase conserved C-terminal domain KBP48_09105 PF00270 DEAD/DEAH box helicase KBP48_09110 PF01042 Endoribonuclease L-PSP KBP48_09115 PF02824 TGS domain KBP48_09115 PF04607 Region found in RelA / SpoT proteins KBP48_09115 PF13291 ACT domain KBP48_09120 PF01565 FAD binding domain KBP48_09120 PF02913 FAD linked oxidases, C-terminal domain KBP48_09125 PF00691 OmpA family KBP48_09125 PF05736 OprF membrane domain KBP48_09130 PF02600 Disulfide bond formation protein DsbB KBP48_09135 PF00593 TonB dependent receptor KBP48_09135 PF07715 TonB-dependent Receptor Plug Domain KBP48_09140 PF02590 Predicted SPOUT methyltransferase KBP48_09190 PF17757 UvrB interaction domain KBP48_09190 PF12344 Ultra-violet resistance protein B KBP48_09190 PF02151 UvrB/uvrC motif KBP48_09190 PF04851 Type III restriction enzyme, res subunit KBP48_09190 PF00271 Helicase conserved C-terminal domain KBP48_09205 PF00701 Dihydrodipicolinate synthetase family KBP48_09215 PF00578 AhpC/TSA family KBP48_09235 PF02769 AIR synthase related protein, C-terminal domain KBP48_09235 PF00586 AIR synthase related protein, N-terminal domain KBP48_09240 PF01029 NusB family KBP48_09245 PF00885 6,7-dimethyl-8-ribityllumazine synthase KBP48_09250 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KBP48_09250 PF00925 GTP cyclohydrolase II KBP48_09255 PF00677 Lumazine binding domain KBP48_09265 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KBP48_09265 PF01872 RibD C-terminal domain KBP48_09270 PF03477 ATP cone domain KBP48_09280 PF00464 Serine hydroxymethyltransferase KBP48_09285 PF00005 ABC transporter KBP48_09285 PF12848 ABC transporter KBP48_09290 PF06039 Malate:quinone oxidoreductase (Mqo) KBP48_09295 PF04134 Protein of unknown function, DUF393 KBP48_09300 PF02578 Multi-copper polyphenol oxidoreductase laccase KBP48_09305 PF00849 RNA pseudouridylate synthase KBP48_09305 PF01479 S4 domain KBP48_09310 PF13525 Outer membrane lipoprotein KBP48_09320 PF04023 FeoA domain KBP48_09320 PF07664 Ferrous iron transport protein B C terminus KBP48_09320 PF02421 Ferrous iron transport protein B KBP48_09320 PF07670 Nucleoside recognition KBP48_09320 PF17910 FeoB cytosolic helical domain KBP48_09330 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KBP48_09335 PF01029 NusB family KBP48_09335 PF01189 16S rRNA methyltransferase RsmB/F KBP48_09340 PF02911 Formyl transferase, C-terminal domain KBP48_09340 PF00551 Formyl transferase KBP48_09345 PF01327 Polypeptide deformylase KBP48_09355 PF17782 DprA winged helix domain KBP48_09355 PF02481 DNA recombination-mediator protein A KBP48_09360 PF04361 Protein of unknown function (DUF494) KBP48_09365 PF13368 Topoisomerase C-terminal repeat KBP48_09365 PF01131 DNA topoisomerase KBP48_09365 PF01751 Toprim domain KBP48_09370 PF01300 Telomere recombination KBP48_09400 PF04386 Stringent starvation protein B KBP48_09405 PF02798 Glutathione S-transferase, N-terminal domain KBP48_09405 PF00043 Glutathione S-transferase, C-terminal domain KBP48_09410 PF02167 Cytochrome C1 family KBP48_09415 PF00033 Cytochrome b/b6/petB KBP48_09415 PF00032 Cytochrome b(C-terminal)/b6/petD KBP48_09420 PF00355 Rieske [2Fe-2S] domain KBP48_09420 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KBP48_09430 PF04055 Radical SAM superfamily KBP48_09430 PF00919 Uncharacterized protein family UPF0004 KBP48_09430 PF01938 TRAM domain KBP48_09435 PF02562 PhoH-like protein KBP48_09440 PF02130 Uncharacterized protein family UPF0054 KBP48_09450 PF00571 CBS domain KBP48_09450 PF03471 Transporter associated domain KBP48_09460 PF01544 CorA-like Mg2+ transporter protein KBP48_09565 PF00912 Transglycosylase KBP48_09565 PF14814 Bifunctional transglycosylase second domain KBP48_09565 PF00905 Penicillin binding protein transpeptidase domain KBP48_09575 PF13307 Helicase C-terminal domain KBP48_09575 PF04851 Type III restriction enzyme, res subunit KBP48_09590 PF00484 Carbonic anhydrase KBP48_09600 PF01522 Polysaccharide deacetylase KBP48_09610 PF09383 NIL domain KBP48_09610 PF00005 ABC transporter KBP48_09615 PF00528 Binding-protein-dependent transport system inner membrane component KBP48_09620 PF03180 NLPA lipoprotein KBP48_09635 PF02817 e3 binding domain KBP48_09635 PF00364 Biotin-requiring enzyme KBP48_09635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KBP48_09640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KBP48_09640 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBP48_09650 PF01545 Cation efflux family KBP48_09655 PF01053 Cys/Met metabolism PLP-dependent enzyme KBP48_09660 PF00561 alpha/beta hydrolase fold KBP48_09665 PF01551 Peptidase family M23 KBP48_09675 PF01975 Survival protein SurE KBP48_09685 PF09335 SNARE associated Golgi protein KBP48_09690 PF01476 LysM domain KBP48_09690 PF01551 Peptidase family M23 KBP48_09700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_09700 PF00989 PAS fold KBP48_09700 PF16736 Single Cache-like KBP48_09700 PF00512 His Kinase A (phospho-acceptor) domain KBP48_09705 PF01168 Alanine racemase, N-terminal domain KBP48_09705 PF00842 Alanine racemase, C-terminal domain KBP48_09710 PF01266 FAD dependent oxidoreductase KBP48_09715 PF01641 SelR domain KBP48_09720 PF01476 LysM domain KBP48_09720 PF00704 Glycosyl hydrolases family 18 KBP48_09725 PF07691 PA14 domain KBP48_09725 PF00728 Glycosyl hydrolase family 20, catalytic domain KBP48_09725 PF02838 Glycosyl hydrolase family 20, domain 2 KBP48_09735 PF07691 PA14 domain KBP48_09735 PF14310 Fibronectin type III-like domain KBP48_09735 PF00933 Glycosyl hydrolase family 3 N terminal domain KBP48_09735 PF01915 Glycosyl hydrolase family 3 C-terminal domain KBP48_09750 PF17678 Glycosyl hydrolase family 92 N-terminal domain KBP48_09750 PF07971 Glycosyl hydrolase family 92 KBP48_09755 PF01301 Glycosyl hydrolases family 35 KBP48_09760 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KBP48_09765 PF09312 SurA N-terminal domain KBP48_09765 PF00639 PPIC-type PPIASE domain KBP48_09770 PF04453 LPS transport system D KBP48_09770 PF03968 OstA-like protein KBP48_09775 PF01494 FAD binding domain KBP48_09780 PF01494 FAD binding domain KBP48_09785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KBP48_09785 PF03466 LysR substrate binding domain KBP48_09790 PF14824 Sirohaem biosynthesis protein central KBP48_09790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KBP48_09790 PF10414 Sirohaem synthase dimerisation region KBP48_09795 PF00291 Pyridoxal-phosphate dependent enzyme KBP48_09815 PF00274 Fructose-bisphosphate aldolase class-I KBP48_09825 PF00224 Pyruvate kinase, barrel domain KBP48_09825 PF02887 Pyruvate kinase, alpha/beta domain KBP48_09835 PF00162 Phosphoglycerate kinase KBP48_09840 PF00749 tRNA synthetases class I (E and Q), catalytic domain KBP48_09845 PF01475 Ferric uptake regulator family KBP48_09855 PF00553 Cellulose binding domain KBP48_09855 PF00150 Cellulase (glycosyl hydrolase family 5) KBP48_09865 PF00675 Insulinase (Peptidase family M16) KBP48_09865 PF05193 Peptidase M16 inactive domain KBP48_09880 PF03330 Lytic transglycolase KBP48_09885 PF07516 SecA Wing and Scaffold domain KBP48_09885 PF01043 SecA preprotein cross-linking domain KBP48_09885 PF07517 SecA DEAD-like domain KBP48_09885 PF02810 SEC-C motif KBP48_09890 PF08525 Opacity-associated protein A N-terminal motif KBP48_09890 PF01551 Peptidase family M23 KBP48_09890 PF01476 LysM domain KBP48_09900 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KBP48_09905 PF00091 Tubulin/FtsZ family, GTPase domain KBP48_09905 PF12327 FtsZ family, C-terminal domain KBP48_09910 PF02491 SHS2 domain inserted in FTSA KBP48_09915 PF08478 POTRA domain, FtsQ-type KBP48_09915 PF03799 Cell division protein FtsQ KBP48_09920 PF01820 D-ala D-ala ligase N-terminus KBP48_09920 PF07478 D-ala D-ala ligase C-terminus KBP48_09925 PF08245 Mur ligase middle domain KBP48_09925 PF02875 Mur ligase family, glutamate ligase domain KBP48_09925 PF01225 Mur ligase family, catalytic domain KBP48_09930 PF03033 Glycosyltransferase family 28 N-terminal domain KBP48_09930 PF04101 Glycosyltransferase family 28 C-terminal domain KBP48_09935 PF01098 Cell cycle protein KBP48_09940 PF00953 Glycosyl transferase family 4 KBP48_09945 PF02875 Mur ligase family, glutamate ligase domain KBP48_09945 PF01225 Mur ligase family, catalytic domain KBP48_09945 PF08245 Mur ligase middle domain KBP48_09950 PF02875 Mur ligase family, glutamate ligase domain KBP48_09950 PF08245 Mur ligase middle domain KBP48_09950 PF01225 Mur ligase family, catalytic domain KBP48_09955 PF00905 Penicillin binding protein transpeptidase domain KBP48_09955 PF03717 Penicillin-binding Protein dimerisation domain KBP48_09960 PF04999 Cell division protein FtsL KBP48_09965 PF01795 MraW methylase family KBP48_09970 PF02381 MraZ protein, putative antitoxin-like KBP48_09975 PF02080 TrkA-C domain KBP48_09975 PF03600 Citrate transporter KBP48_09980 PF02390 Putative methyltransferase KBP48_09985 PF05690 Thiazole biosynthesis protein ThiG KBP48_09990 PF05690 Thiazole biosynthesis protein ThiG KBP48_09990 PF02597 ThiS family KBP48_10030 PF07977 FabA-like domain KBP48_10050 PF00753 Metallo-beta-lactamase superfamily KBP48_10050 PF04273 Putative phosphatase (DUF442) KBP48_10060 PF04143 Sulphur transport KBP48_10070 PF01925 Sulfite exporter TauE/SafE KBP48_10075 PF00692 dUTPase KBP48_10085 PF08676 MutL C terminal dimerisation domain KBP48_10085 PF01119 DNA mismatch repair protein, C-terminal domain KBP48_10090 PF01520 N-acetylmuramoyl-L-alanine amidase KBP48_10090 PF11741 AMIN domain KBP48_10095 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KBP48_10100 PF03853 YjeF-related protein N-terminus KBP48_10100 PF01256 Carbohydrate kinase KBP48_10105 PF13742 OB-fold nucleic acid binding domain KBP48_10105 PF02601 Exonuclease VII, large subunit KBP48_10120 PF00570 HRDC domain KBP48_10120 PF01612 3'-5' exonuclease KBP48_10130 PF18125 RlmM ferredoxin-like domain KBP48_10130 PF01728 FtsJ-like methyltransferase KBP48_10150 PF03483 B3/4 domain KBP48_10150 PF03147 Ferredoxin-fold anticodon binding domain KBP48_10150 PF01588 Putative tRNA binding domain KBP48_10150 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KBP48_10150 PF03484 tRNA synthetase B5 domain KBP48_10155 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KBP48_10155 PF01409 tRNA synthetases class II core domain (F) KBP48_10160 PF00453 Ribosomal protein L20 KBP48_10165 PF01632 Ribosomal protein L35 KBP48_10170 PF00707 Translation initiation factor IF-3, C-terminal domain KBP48_10170 PF05198 Translation initiation factor IF-3, N-terminal domain KBP48_10175 PF03129 Anticodon binding domain KBP48_10175 PF02824 TGS domain KBP48_10175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KBP48_10175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KBP48_10190 PF18030 RimK PreATP-grasp domain KBP48_10190 PF08443 RimK-like ATP-grasp domain KBP48_10195 PF00486 Transcriptional regulatory protein, C terminal KBP48_10195 PF00072 Response regulator receiver domain KBP48_10200 PF00512 His Kinase A (phospho-acceptor) domain KBP48_10200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_10200 PF00672 HAMP domain KBP48_10205 PF01121 Dephospho-CoA kinase KBP48_10210 PF01478 Type IV leader peptidase family KBP48_10210 PF06750 Bacterial Peptidase A24 N-terminal domain KBP48_10215 PF00482 Type II secretion system (T2SS), protein F KBP48_10220 PF00114 Pilin (bacterial filament) KBP48_10220 PF07963 Prokaryotic N-terminal methylation motif KBP48_10230 PF00114 Pilin (bacterial filament) KBP48_10230 PF07963 Prokaryotic N-terminal methylation motif KBP48_10235 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KBP48_10235 PF00437 Type II/IV secretion system protein KBP48_10240 PF02954 Bacterial regulatory protein, Fis family KBP48_10240 PF00072 Response regulator receiver domain KBP48_10240 PF00158 Sigma-54 interaction domain KBP48_10245 PF00512 His Kinase A (phospho-acceptor) domain KBP48_10245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_10250 PF08442 ATP-grasp domain KBP48_10250 PF00549 CoA-ligase KBP48_10255 PF00549 CoA-ligase KBP48_10255 PF02629 CoA binding domain KBP48_10270 PF08479 POTRA domain, ShlB-type KBP48_10270 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KBP48_10270 PF17287 POTRA domain KBP48_10280 PF03989 DNA gyrase C-terminal domain, beta-propeller KBP48_10280 PF00521 DNA gyrase/topoisomerase IV, subunit A KBP48_10285 PF01008 Initiation factor 2 subunit family KBP48_10295 PF00152 tRNA synthetases class II (D, K and N) KBP48_10305 PF00533 BRCA1 C Terminus (BRCT) domain KBP48_10305 PF01653 NAD-dependent DNA ligase adenylation domain KBP48_10305 PF03120 NAD-dependent DNA ligase OB-fold domain KBP48_10305 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KBP48_10305 PF12826 Helix-hairpin-helix motif KBP48_10310 PF04354 ZipA, C-terminal FtsZ-binding domain KBP48_10315 PF02463 RecF/RecN/SMC N terminal domain KBP48_10320 PF01281 Ribosomal protein L9, N-terminal domain KBP48_10320 PF03948 Ribosomal protein L9, C-terminal domain KBP48_10325 PF01084 Ribosomal protein S18 KBP48_10330 PF01250 Ribosomal protein S6 KBP48_10335 PF01521 Iron-sulphur cluster biosynthesis KBP48_10340 PF01336 OB-fold nucleic acid binding domain KBP48_10340 PF00152 tRNA synthetases class II (D, K and N) KBP48_10345 PF01061 ABC-2 type transporter KBP48_10350 PF00005 ABC transporter KBP48_10365 PF01180 Dihydroorotate dehydrogenase KBP48_10370 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KBP48_10370 PF01565 FAD binding domain KBP48_10375 PF00892 EamA-like transporter family KBP48_10380 PF01569 PAP2 superfamily KBP48_10385 PF04551 GcpE protein KBP48_10395 PF00072 Response regulator receiver domain KBP48_10400 PF00889 Elongation factor TS KBP48_10405 PF00318 Ribosomal protein S2 KBP48_10415 PF00005 ABC transporter KBP48_10415 PF00664 ABC transporter transmembrane region KBP48_10425 PF02321 Outer membrane efflux protein KBP48_10430 PF00149 Calcineurin-like phosphoesterase KBP48_10440 PF02541 Ppx/GppA phosphatase family KBP48_10445 PF02503 Polyphosphate kinase middle domain KBP48_10445 PF17941 Polyphosphate kinase C-terminal domain 1 KBP48_10445 PF13089 Polyphosphate kinase N-terminal domain KBP48_10445 PF13090 Polyphosphate kinase C-terminal domain 2 KBP48_10450 PF11808 Phosphate regulon sensor protein PhoR KBP48_10450 PF00989 PAS fold KBP48_10450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KBP48_10450 PF00512 His Kinase A (phospho-acceptor) domain KBP48_10455 PF00486 Transcriptional regulatory protein, C terminal KBP48_10455 PF00072 Response regulator receiver domain KBP48_10460 PF13181 Tetratricopeptide repeat KBP48_10460 PF01435 Peptidase family M48 KBP48_10465 PF00462 Glutaredoxin KBP48_10470 PF18324 Hypothetical protein TT1725 KBP48_10470 PF00180 Isocitrate/isopropylmalate dehydrogenase KBP48_10480 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KBP48_10480 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KBP48_10485 PF00884 Sulfatase KBP48_10485 PF11893 Domain of unknown function (DUF3413) KBP48_10490 PF00037 4Fe-4S binding domain KBP48_10490 PF11953 Domain of unknown function (DUF3470) KBP48_10500 PF01106 NifU-like domain KBP48_10505 PF01329 Pterin 4 alpha carbinolamine dehydratase KBP48_10515 PF01479 S4 domain KBP48_10515 PF00849 RNA pseudouridylate synthase KBP48_10520 PF12111 Polyribonucleotide phosphorylase C terminal KBP48_10520 PF00575 S1 RNA binding domain KBP48_10520 PF10150 Ribonuclease E/G family KBP48_10525 PF00196 Bacterial regulatory proteins, luxR family KBP48_10525 PF00072 Response regulator receiver domain KBP48_10530 PF17773 UPF0176 acylphosphatase like domain KBP48_10540 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KBP48_10540 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KBP48_10545 PF00545 ribonuclease KBP48_10555 PF00005 ABC transporter KBP48_10555 PF12848 ABC transporter KBP48_10555 PF16326 ABC transporter C-terminal domain KBP48_10565 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KBP48_10570 PF00313 'Cold-shock' DNA-binding domain KBP48_10575 PF00360 Phytochrome region KBP48_10575 PF00990 Diguanylate cyclase, GGDEF domain KBP48_10575 PF00563 EAL domain KBP48_10575 PF01590 GAF domain KBP48_10580 PF01435 Peptidase family M48 KBP48_10585 PF03143 Elongation factor Tu C-terminal domain KBP48_10585 PF03144 Elongation factor Tu domain 2 KBP48_10585 PF00009 Elongation factor Tu GTP binding domain KBP48_10590 PF03144 Elongation factor Tu domain 2 KBP48_10590 PF00009 Elongation factor Tu GTP binding domain KBP48_10590 PF14492 Elongation Factor G, domain II KBP48_10590 PF00679 Elongation factor G C-terminus KBP48_10590 PF03764 Elongation factor G, domain IV KBP48_10595 PF00177 Ribosomal protein S7p/S5e KBP48_10600 PF00164 Ribosomal protein S12/S23 KBP48_10605 PF04998 RNA polymerase Rpb1, domain 5 KBP48_10605 PF05000 RNA polymerase Rpb1, domain 4 KBP48_10605 PF04983 RNA polymerase Rpb1, domain 3 KBP48_10605 PF00623 RNA polymerase Rpb1, domain 2 KBP48_10605 PF04997 RNA polymerase Rpb1, domain 1 KBP48_10610 PF10385 RNA polymerase beta subunit external 1 domain KBP48_10610 PF04565 RNA polymerase Rpb2, domain 3 KBP48_10610 PF04561 RNA polymerase Rpb2, domain 2 KBP48_10610 PF04560 RNA polymerase Rpb2, domain 7 KBP48_10610 PF00562 RNA polymerase Rpb2, domain 6 KBP48_10610 PF04563 RNA polymerase beta subunit KBP48_10615 PF16320 Ribosomal protein L7/L12 dimerisation domain KBP48_10615 PF00542 Ribosomal protein L7/L12 C-terminal domain KBP48_10620 PF00466 Ribosomal protein L10 KBP48_10625 PF00687 Ribosomal protein L1p/L10e family KBP48_10630 PF03946 Ribosomal protein L11, N-terminal domain KBP48_10630 PF00298 Ribosomal protein L11, RNA binding domain KBP48_10635 PF00467 KOW motif KBP48_10635 PF02357 Transcription termination factor nusG KBP48_10640 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KBP48_10670 PF01926 50S ribosome-binding GTPase KBP48_10670 PF06071 Protein of unknown function (DUF933) KBP48_10675 PF01195 Peptidyl-tRNA hydrolase KBP48_10680 PF01386 Ribosomal L25p family KBP48_10680 PF14693 Ribosomal protein TL5, C-terminal domain KBP48_10685 PF14572 Phosphoribosyl synthetase-associated domain KBP48_10685 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KBP48_10695 PF00288 GHMP kinases N terminal domain KBP48_10695 PF08544 GHMP kinases C terminal KBP48_10700 PF03550 Outer membrane lipoprotein LolB KBP48_10710 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KBP48_10710 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KBP48_10710 PF01488 Shikimate / quinate 5-dehydrogenase KBP48_10715 PF00472 RF-1 domain KBP48_10715 PF03462 PCRF domain KBP48_10725 PF01170 Putative RNA methylase family UPF0020 KBP48_10725 PF02926 THUMP domain KBP48_10725 PF10672 S-adenosylmethionine-dependent methyltransferase KBP48_10760 PF01914 MarC family integral membrane protein KBP48_10770 PF00462 Glutaredoxin KBP48_10775 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KBP48_10775 PF02222 ATP-grasp domain KBP48_10780 PF00731 AIR carboxylase KBP48_10795 PF07731 Multicopper oxidase KBP48_10795 PF07732 Multicopper oxidase KBP48_10805 PF13361 UvrD-like helicase C-terminal domain KBP48_10805 PF00580 UvrD/REP helicase N-terminal domain KBP48_10810 PF04349 Periplasmic glucan biosynthesis protein, MdoG KBP48_10815 PF01343 Peptidase family S49 KBP48_10820 PF01554 MatE KBP48_10835 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KBP48_10835 PF18074 Primosomal protein N C-terminal domain KBP48_10835 PF17764 3′ DNA-binding domain (3′BD) KBP48_10835 PF00271 Helicase conserved C-terminal domain KBP48_10835 PF00270 DEAD/DEAH box helicase KBP48_10840 PF04545 Sigma-70, region 4 KBP48_10840 PF04542 Sigma-70 region 2 KBP48_10845 PF03167 Uracil DNA glycosylase superfamily KBP48_10850 PF01339 CheB methylesterase KBP48_10850 PF00072 Response regulator receiver domain KBP48_10855 PF18075 FtsX extracellular domain KBP48_10860 PF00005 ABC transporter KBP48_10865 PF12300 ATP-dependent RNA helicase RhlB KBP48_10865 PF00271 Helicase conserved C-terminal domain KBP48_10865 PF00270 DEAD/DEAH box helicase KBP48_10870 PF00085 Thioredoxin KBP48_10875 PF07498 Rho termination factor, N-terminal domain KBP48_10875 PF07497 Rho termination factor, RNA-binding domain KBP48_10875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KBP48_10880 PF03971 Monomeric isocitrate dehydrogenase KBP48_10890 PF13180 PDZ domain KBP48_10890 PF03572 Peptidase family S41 KBP48_10895 PF01551 Peptidase family M23 KBP48_10910 PF00150 Cellulase (glycosyl hydrolase family 5) KBP48_10915 PF07992 Pyridine nucleotide-disulphide oxidoreductase KBP48_10915 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KBP48_10920 PF01493 GXGXG motif KBP48_10920 PF01645 Conserved region in glutamate synthase KBP48_10920 PF04898 Glutamate synthase central domain KBP48_10920 PF00310 Glutamine amidotransferases class-II KBP48_10925 PF14748 Pyrroline-5-carboxylate reductase dimerisation KBP48_10925 PF03807 NADP oxidoreductase coenzyme F420-dependent KBP48_10970 PF18766 SWI2/SNF2 ATPase KBP48_10970 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KBP48_10970 PF11867 Domain of unknown function (DUF3387) KBP48_10980 PF12161 HsdM N-terminal domain KBP48_10980 PF02384 N-6 DNA Methylase KBP48_10995 PF18766 SWI2/SNF2 ATPase KBP48_10995 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KBP48_10995 PF12008 Type I restriction and modification enzyme - subunit R C terminal KBP48_11010 PF12161 HsdM N-terminal domain KBP48_11010 PF02384 N-6 DNA Methylase KBP48_11015 PF01810 LysE type translocator KBP48_11030 PF11855 Protein of unknown function (DUF3375) KBP48_11070 PF11867 Domain of unknown function (DUF3387) KBP48_11070 PF18766 SWI2/SNF2 ATPase KBP48_11070 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KBP48_11085 PF02384 N-6 DNA Methylase KBP48_11170 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) KBP48_11170 PF06594 Haemolysin-type calcium binding protein related domain KBP48_11185 PF06594 Haemolysin-type calcium binding protein related domain KBP48_11185 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) KBP48_11225 PF01850 PIN domain KBP48_11310 PF01926 50S ribosome-binding GTPase KBP48_11310 PF12631 MnmE helical domain KBP48_11310 PF10396 GTP-binding protein TrmE N-terminus KBP48_11320 PF02096 60Kd inner membrane protein KBP48_11320 PF14849 YidC periplasmic domain KBP48_11325 PF00825 Ribonuclease P KBP48_11330 PF00468 Ribosomal protein L34