locus-tag class description HKJ31_00005 PF00308 Bacterial dnaA protein HKJ31_00005 PF11638 DnaA N-terminal domain HKJ31_00005 PF08299 Bacterial dnaA protein helix-turn-helix HKJ31_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HKJ31_00010 PF02767 DNA polymerase III beta subunit, central domain HKJ31_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HKJ31_00015 PF02463 RecF/RecN/SMC N terminal domain HKJ31_00020 PF01751 Toprim domain HKJ31_00020 PF18053 DNA gyrase B subunit insert domain HKJ31_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HKJ31_00020 PF00204 DNA gyrase B HKJ31_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_00030 PF01435 Peptidase family M48 HKJ31_00040 PF03544 Gram-negative bacterial TonB protein C-terminal HKJ31_00045 PF01618 MotA/TolQ/ExbB proton channel family HKJ31_00050 PF02472 Biopolymer transport protein ExbD/TolR HKJ31_00055 PF02472 Biopolymer transport protein ExbD/TolR HKJ31_00070 PF01218 Coproporphyrinogen III oxidase HKJ31_00090 PF00793 DAHP synthetase I family HKJ31_00115 PF05567 Neisseria PilC beta-propeller domain HKJ31_00125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HKJ31_00130 PF00155 Aminotransferase class I and II HKJ31_00135 PF01741 Large-conductance mechanosensitive channel, MscL HKJ31_00155 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HKJ31_00165 PF02559 CarD-like/TRCF domain HKJ31_00165 PF00271 Helicase conserved C-terminal domain HKJ31_00165 PF03461 TRCF domain HKJ31_00165 PF00270 DEAD/DEAH box helicase HKJ31_00165 PF17757 UvrB interaction domain HKJ31_00170 PF01220 Dehydroquinase class II HKJ31_00175 PF00364 Biotin-requiring enzyme HKJ31_00180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKJ31_00180 PF02785 Biotin carboxylase C-terminal domain HKJ31_00180 PF00289 Biotin carboxylase, N-terminal domain HKJ31_00185 PF00580 UvrD/REP helicase N-terminal domain HKJ31_00185 PF13361 UvrD-like helicase C-terminal domain HKJ31_00190 PF00042 Globin HKJ31_00190 PF00970 Oxidoreductase FAD-binding domain HKJ31_00190 PF00175 Oxidoreductase NAD-binding domain HKJ31_00200 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HKJ31_00205 PF08535 KorB domain HKJ31_00205 PF06613 KorB C-terminal beta-barrel domain HKJ31_00205 PF02195 ParB-like nuclease domain HKJ31_00210 PF00156 Phosphoribosyl transferase domain HKJ31_00215 PF06968 Biotin and Thiamin Synthesis associated domain HKJ31_00215 PF04055 Radical SAM superfamily HKJ31_00220 PF01734 Patatin-like phospholipase HKJ31_00225 PF01040 UbiA prenyltransferase family HKJ31_00260 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HKJ31_00260 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HKJ31_00265 PF01578 Cytochrome C assembly protein HKJ31_00270 PF00448 SRP54-type protein, GTPase domain HKJ31_00270 PF02881 SRP54-type protein, helical bundle domain HKJ31_00270 PF02978 Signal peptide binding domain HKJ31_00285 PF00419 Fimbrial protein HKJ31_00290 PF13953 PapC C-terminal domain HKJ31_00290 PF13954 PapC N-terminal domain HKJ31_00290 PF00577 Outer membrane usher protein HKJ31_00295 PF02753 Pili assembly chaperone PapD, C-terminal domain HKJ31_00295 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HKJ31_00300 PF16970 Type-1 fimbrial protein, A HKJ31_00305 PF02464 Competence-damaged protein HKJ31_00310 PF00083 Sugar (and other) transporter HKJ31_00315 PF13167 GTP-binding GTPase N-terminal HKJ31_00315 PF01926 50S ribosome-binding GTPase HKJ31_00315 PF16360 GTP-binding GTPase Middle Region HKJ31_00320 PF17209 Hfq protein HKJ31_00330 PF00809 Pterin binding enzyme HKJ31_00340 PF17862 AAA+ lid domain HKJ31_00340 PF06480 FtsH Extracellular HKJ31_00340 PF01434 Peptidase family M41 HKJ31_00340 PF00004 ATPase family associated with various cellular activities (AAA) HKJ31_00345 PF01728 FtsJ-like methyltransferase HKJ31_00350 PF01985 CRS1 / YhbY (CRM) domain HKJ31_00360 PF00920 Dehydratase family HKJ31_00380 PF03279 Bacterial lipid A biosynthesis acyltransferase HKJ31_00385 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HKJ31_00395 PF00886 Ribosomal protein S16 HKJ31_00400 PF05239 PRC-barrel domain HKJ31_00400 PF01782 RimM N-terminal domain HKJ31_00405 PF01746 tRNA (Guanine-1)-methyltransferase HKJ31_00410 PF01245 Ribosomal protein L19 HKJ31_00415 PF00557 Metallopeptidase family M24 HKJ31_00420 PF00132 Bacterial transferase hexapeptide (six repeats) HKJ31_00420 PF14602 Hexapeptide repeat of succinyl-transferase HKJ31_00420 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HKJ31_00425 PF03960 ArsC family HKJ31_00430 PF01546 Peptidase family M20/M25/M40 HKJ31_00430 PF07687 Peptidase dimerisation domain HKJ31_00435 PF13537 Glutamine amidotransferase domain HKJ31_00435 PF00733 Asparagine synthase HKJ31_00445 PF03060 Nitronate monooxygenase HKJ31_00450 PF00717 Peptidase S24-like HKJ31_00450 PF01726 LexA DNA binding domain HKJ31_00455 PF00154 recA bacterial DNA recombination protein HKJ31_00460 PF02272 DHHA1 domain HKJ31_00460 PF01411 tRNA synthetases class II (A) HKJ31_00460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HKJ31_00465 PF02599 Global regulator protein family HKJ31_00475 PF01432 Peptidase family M3 HKJ31_00495 PF07731 Multicopper oxidase HKJ31_00495 PF07732 Multicopper oxidase HKJ31_00495 PF00394 Multicopper oxidase HKJ31_00500 PF05275 Copper resistance protein B precursor (CopB) HKJ31_00505 PF08264 Anticodon-binding domain of tRNA HKJ31_00505 PF10458 Valyl tRNA synthetase tRNA binding arm HKJ31_00505 PF00133 tRNA synthetases class I (I, L, M and V) HKJ31_00525 PF02789 Cytosol aminopeptidase family, N-terminal domain HKJ31_00525 PF00883 Cytosol aminopeptidase family, catalytic domain HKJ31_00545 PF01380 SIS domain HKJ31_00555 PF17284 Spermidine synthase tetramerisation domain HKJ31_00560 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HKJ31_00560 PF17944 Arginine decarboxylase C-terminal helical extension HKJ31_00560 PF17810 Arginine decarboxylase helical bundle domain HKJ31_00565 PF00106 short chain dehydrogenase HKJ31_00575 PF00750 tRNA synthetases class I (R) HKJ31_00575 PF05746 DALR anticodon binding domain HKJ31_00575 PF03485 Arginyl tRNA synthetase N terminal domain HKJ31_00580 PF04002 RadC-like JAB domain HKJ31_00585 PF04127 DNA / pantothenate metabolism flavoprotein HKJ31_00585 PF02441 Flavoprotein HKJ31_00590 PF00692 dUTPase HKJ31_00595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKJ31_00595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKJ31_00595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKJ31_00595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKJ31_00605 PF00156 Phosphoribosyl transferase domain HKJ31_00640 PF07690 Major Facilitator Superfamily HKJ31_00645 PF03702 Anhydro-N-acetylmuramic acid kinase HKJ31_00650 PF04225 Opacity-associated protein A LysM-like domain HKJ31_00650 PF01551 Peptidase family M23 HKJ31_00655 PF00579 tRNA synthetases class I (W and Y) HKJ31_00685 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HKJ31_00685 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HKJ31_00705 PF00009 Elongation factor Tu GTP binding domain HKJ31_00705 PF16658 Class II release factor RF3, C-terminal domain HKJ31_00710 PF03006 Haemolysin-III related HKJ31_00715 PF00535 Glycosyl transferase family 2 HKJ31_00720 PF01026 TatD related DNase HKJ31_00735 PF01597 Glycine cleavage H-protein HKJ31_00740 PF08669 Glycine cleavage T-protein C-terminal barrel domain HKJ31_00740 PF01571 Aminomethyltransferase folate-binding domain HKJ31_00750 PF01145 SPFH domain / Band 7 family HKJ31_00750 PF16200 C-terminal region of band_7 HKJ31_00755 PF03819 MazG nucleotide pyrophosphohydrolase domain HKJ31_00760 PF00459 Inositol monophosphatase family HKJ31_00765 PF00293 NUDIX domain HKJ31_00770 PF00202 Aminotransferase class-III HKJ31_00775 PF04452 RNA methyltransferase HKJ31_00780 PF00271 Helicase conserved C-terminal domain HKJ31_00780 PF00270 DEAD/DEAH box helicase HKJ31_00785 PF01242 6-pyruvoyl tetrahydropterin synthase HKJ31_00805 PF02899 Phage integrase, N-terminal SAM-like domain HKJ31_00805 PF00589 Phage integrase family HKJ31_00940 PF00959 Phage lysozyme HKJ31_01015 PF04221 RelB antitoxin HKJ31_01040 PF04984 Phage tail sheath protein subtilisin-like domain HKJ31_01040 PF17482 Phage tail sheath C-terminal domain HKJ31_01095 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HKJ31_01100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HKJ31_01100 PF02811 PHP domain HKJ31_01100 PF07733 Bacterial DNA polymerase III alpha NTPase domain HKJ31_01100 PF01336 OB-fold nucleic acid binding domain HKJ31_01100 PF14579 Helix-hairpin-helix motif HKJ31_01105 PF01259 SAICAR synthetase HKJ31_01110 PF01556 DnaJ C terminal domain HKJ31_01110 PF00684 DnaJ central domain HKJ31_01110 PF00226 DnaJ domain HKJ31_01115 PF00834 Ribulose-phosphate 3 epimerase family HKJ31_01125 PF00425 chorismate binding enzyme HKJ31_01125 PF04715 Anthranilate synthase component I, N terminal region HKJ31_01130 PF00117 Glutamine amidotransferase class-I HKJ31_01135 PF02885 Glycosyl transferase family, helical bundle domain HKJ31_01135 PF00591 Glycosyl transferase family, a/b domain HKJ31_01140 PF00218 Indole-3-glycerol phosphate synthase HKJ31_01160 PF00557 Metallopeptidase family M24 HKJ31_01160 PF01321 Creatinase/Prolidase N-terminal domain HKJ31_01175 PF01702 Queuine tRNA-ribosyltransferase HKJ31_01180 PF02699 Preprotein translocase subunit HKJ31_01185 PF13721 SecD export protein N-terminal TM region HKJ31_01185 PF02355 Protein export membrane protein HKJ31_01185 PF07549 SecD/SecF GG Motif HKJ31_01190 PF02355 Protein export membrane protein HKJ31_01190 PF07549 SecD/SecF GG Motif HKJ31_01200 PF12627 Probable RNA and SrmB- binding site of polymerase A HKJ31_01200 PF01743 Poly A polymerase head domain HKJ31_01200 PF12626 Polymerase A arginine-rich C-terminus HKJ31_01205 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HKJ31_01210 PF02548 Ketopantoate hydroxymethyltransferase HKJ31_01215 PF02569 Pantoate-beta-alanine ligase HKJ31_01220 PF02261 Aspartate decarboxylase HKJ31_01225 PF00342 Phosphoglucose isomerase HKJ31_01235 PF17384 RimP C-terminal SH3 domain HKJ31_01235 PF02576 RimP N-terminal domain HKJ31_01240 PF00575 S1 RNA binding domain HKJ31_01240 PF13184 NusA-like KH domain HKJ31_01240 PF08529 NusA N-terminal domain HKJ31_01245 PF11987 Translation-initiation factor 2 HKJ31_01245 PF08364 Bacterial translation initiation factor IF-2 associated region HKJ31_01245 PF04760 Translation initiation factor IF-2, N-terminal region HKJ31_01245 PF00009 Elongation factor Tu GTP binding domain HKJ31_01250 PF02033 Ribosome-binding factor A HKJ31_01255 PF09157 Pseudouridine synthase II TruB, C-terminal HKJ31_01255 PF01509 TruB family pseudouridylate synthase (N terminal domain) HKJ31_01255 PF16198 tRNA pseudouridylate synthase B C-terminal domain HKJ31_01260 PF00312 Ribosomal protein S15 HKJ31_01265 PF00575 S1 RNA binding domain HKJ31_01265 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HKJ31_01265 PF01138 3' exoribonuclease family, domain 1 HKJ31_01265 PF03725 3' exoribonuclease family, domain 2 HKJ31_01265 PF00013 KH domain HKJ31_01270 PF01638 HxlR-like helix-turn-helix HKJ31_01275 PF05368 NmrA-like family HKJ31_01310 PF03880 DbpA RNA binding domain HKJ31_01310 PF00270 DEAD/DEAH box helicase HKJ31_01310 PF00271 Helicase conserved C-terminal domain HKJ31_01320 PF00766 Electron transfer flavoprotein FAD-binding domain HKJ31_01320 PF01012 Electron transfer flavoprotein domain HKJ31_01325 PF01012 Electron transfer flavoprotein domain HKJ31_01330 PF16363 GDP-mannose 4,6 dehydratase HKJ31_01335 PF00483 Nucleotidyl transferase HKJ31_01340 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HKJ31_01345 PF04321 RmlD substrate binding domain HKJ31_01350 PF01050 Mannose-6-phosphate isomerase HKJ31_01350 PF00483 Nucleotidyl transferase HKJ31_01355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKJ31_01355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKJ31_01355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKJ31_01355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKJ31_01380 PF03797 Autotransporter beta-domain HKJ31_01380 PF12951 Passenger-associated-transport-repeat HKJ31_01380 PF00082 Subtilase family HKJ31_01385 PF06779 Uncharacterised MFS-type transporter YbfB HKJ31_01395 PF00365 Phosphofructokinase HKJ31_01405 PF01225 Mur ligase family, catalytic domain HKJ31_01405 PF02875 Mur ligase family, glutamate ligase domain HKJ31_01405 PF08245 Mur ligase middle domain HKJ31_01410 PF01569 PAP2 superfamily HKJ31_01425 PF00883 Cytosol aminopeptidase family, catalytic domain HKJ31_01425 PF02789 Cytosol aminopeptidase family, N-terminal domain HKJ31_01430 PF01594 AI-2E family transporter HKJ31_01450 PF00595 PDZ domain HKJ31_01455 PF01370 NAD dependent epimerase/dehydratase family HKJ31_01455 PF08338 Domain of unknown function (DUF1731) HKJ31_01460 PF13193 AMP-binding enzyme C-terminal domain HKJ31_01460 PF00501 AMP-binding enzyme HKJ31_01465 PF00330 Aconitase family (aconitate hydratase) HKJ31_01465 PF00694 Aconitase C-terminal domain HKJ31_01480 PF11791 Aconitate B N-terminal domain HKJ31_01480 PF00330 Aconitase family (aconitate hydratase) HKJ31_01480 PF06434 Aconitate hydratase 2 N-terminus HKJ31_01530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKJ31_01540 PF00121 Triosephosphate isomerase HKJ31_01555 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HKJ31_01560 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HKJ31_01565 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HKJ31_01570 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HKJ31_01580 PF10531 SLBB domain HKJ31_01580 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HKJ31_01580 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HKJ31_01585 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HKJ31_01585 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal HKJ31_01585 PF00384 Molybdopterin oxidoreductase HKJ31_01590 PF00146 NADH dehydrogenase HKJ31_01595 PF12838 4Fe-4S dicluster domain HKJ31_01600 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HKJ31_01605 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HKJ31_01610 PF00361 Proton-conducting membrane transporter HKJ31_01610 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HKJ31_01615 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HKJ31_01615 PF00361 Proton-conducting membrane transporter HKJ31_01620 PF00361 Proton-conducting membrane transporter HKJ31_01625 PF00106 short chain dehydrogenase HKJ31_01630 PF03600 Citrate transporter HKJ31_01640 PF00072 Response regulator receiver domain HKJ31_01640 PF00486 Transcriptional regulatory protein, C terminal HKJ31_01645 PF08521 Two-component sensor kinase N-terminal HKJ31_01645 PF00512 His Kinase A (phospho-acceptor) domain HKJ31_01645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_01660 PF00072 Response regulator receiver domain HKJ31_01660 PF00196 Bacterial regulatory proteins, luxR family HKJ31_01665 PF00512 His Kinase A (phospho-acceptor) domain HKJ31_01665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_01665 PF00072 Response regulator receiver domain HKJ31_01665 PF09456 RcsC Alpha-Beta-Loop (ABL) HKJ31_01680 PF00375 Sodium:dicarboxylate symporter family HKJ31_01685 PF01515 Phosphate acetyl/butaryl transferase HKJ31_01685 PF03949 Malic enzyme, NAD binding domain HKJ31_01685 PF00390 Malic enzyme, N-terminal domain HKJ31_01690 PF00183 Hsp90 protein HKJ31_01690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_01700 PF01467 Cytidylyltransferase-like HKJ31_01710 PF00037 4Fe-4S binding domain HKJ31_01720 PF00990 Diguanylate cyclase, GGDEF domain HKJ31_01720 PF05230 MASE2 domain HKJ31_01725 PF08460 Bacterial SH3 domain HKJ31_01725 PF01551 Peptidase family M23 HKJ31_01730 PF01979 Amidohydrolase family HKJ31_01735 PF01809 Putative membrane protein insertion efficiency factor HKJ31_01740 PF01258 Prokaryotic dksA/traR C4-type zinc finger HKJ31_01750 PF05977 Transmembrane secretion effector HKJ31_01755 PF02657 Fe-S metabolism associated domain HKJ31_01760 PF09190 DALR domain HKJ31_01760 PF01406 tRNA synthetases class I (C) catalytic domain HKJ31_01775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HKJ31_01775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HKJ31_01780 PF00764 Arginosuccinate synthase HKJ31_01785 PF07687 Peptidase dimerisation domain HKJ31_01785 PF01546 Peptidase family M20/M25/M40 HKJ31_01790 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase HKJ31_01790 PF00696 Amino acid kinase family HKJ31_01795 PF01118 Semialdehyde dehydrogenase, NAD binding domain HKJ31_01800 PF00206 Lyase HKJ31_01805 PF01472 PUA domain HKJ31_01805 PF00696 Amino acid kinase family HKJ31_01810 PF00171 Aldehyde dehydrogenase family HKJ31_01830 PF06594 Haemolysin-type calcium binding protein related domain HKJ31_01830 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKJ31_01835 PF14437 MafB19-like deaminase HKJ31_01840 PF01325 Iron dependent repressor, N-terminal DNA binding domain HKJ31_01840 PF02742 Iron dependent repressor, metal binding and dimerisation domain HKJ31_01845 PF01566 Natural resistance-associated macrophage protein HKJ31_01850 PF04376 Arginine-tRNA-protein transferase, N terminus HKJ31_01850 PF04377 Arginine-tRNA-protein transferase, C terminus HKJ31_01870 PF00082 Subtilase family HKJ31_01870 PF03797 Autotransporter beta-domain HKJ31_01870 PF12951 Passenger-associated-transport-repeat HKJ31_01885 PF01553 Acyltransferase HKJ31_01905 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HKJ31_01905 PF05221 S-adenosyl-L-homocysteine hydrolase HKJ31_01915 PF01351 Ribonuclease HII HKJ31_01920 PF02684 Lipid-A-disaccharide synthetase HKJ31_01925 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HKJ31_01925 PF00132 Bacterial transferase hexapeptide (six repeats) HKJ31_01930 PF07977 FabA-like domain HKJ31_01935 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HKJ31_01935 PF00132 Bacterial transferase hexapeptide (six repeats) HKJ31_01940 PF07244 Surface antigen variable number repeat HKJ31_01940 PF01103 Surface antigen HKJ31_01945 PF02163 Peptidase family M50 HKJ31_01945 PF17820 PDZ domain HKJ31_01950 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HKJ31_01950 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HKJ31_01950 PF13288 DXP reductoisomerase C-terminal domain HKJ31_01960 PF01255 Putative undecaprenyl diphosphate synthase HKJ31_01965 PF01765 Ribosome recycling factor HKJ31_01995 PF00696 Amino acid kinase family HKJ31_02020 PF01081 KDPG and KHG aldolase HKJ31_02025 PF00920 Dehydratase family HKJ31_02030 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HKJ31_02035 PF02685 Glucokinase HKJ31_02040 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HKJ31_02040 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HKJ31_02045 PF17912 MalK OB fold domain HKJ31_02045 PF00005 ABC transporter HKJ31_02050 PF01571 Aminomethyltransferase folate-binding domain HKJ31_02060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HKJ31_02065 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HKJ31_02070 PF00890 FAD binding domain HKJ31_02070 PF02910 Fumarate reductase flavoprotein C-term HKJ31_02075 PF13085 2Fe-2S iron-sulfur cluster binding domain HKJ31_02080 PF03937 Flavinator of succinate dehydrogenase HKJ31_02090 PF12704 MacB-like periplasmic core domain HKJ31_02090 PF02687 FtsX-like permease family HKJ31_02095 PF00005 ABC transporter HKJ31_02100 PF00753 Metallo-beta-lactamase superfamily HKJ31_02100 PF03772 Competence protein HKJ31_02105 PF01618 MotA/TolQ/ExbB proton channel family HKJ31_02115 PF00664 ABC transporter transmembrane region HKJ31_02115 PF00005 ABC transporter HKJ31_02120 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HKJ31_02190 PF01381 Helix-turn-helix HKJ31_02260 PF00959 Phage lysozyme HKJ31_02265 PF01555 DNA methylase HKJ31_02335 PF04264 YceI-like domain HKJ31_02340 PF13091 PLD-like domain HKJ31_02360 PF03358 NADPH-dependent FMN reductase HKJ31_02370 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HKJ31_02370 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HKJ31_02390 PF01612 3'-5' exonuclease HKJ31_02390 PF00476 DNA polymerase family A HKJ31_02390 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HKJ31_02390 PF01367 5'-3' exonuclease, C-terminal SAM fold HKJ31_02395 PF05173 Dihydrodipicolinate reductase, C-terminus HKJ31_02395 PF01113 Dihydrodipicolinate reductase, N-terminus HKJ31_02400 PF00117 Glutamine amidotransferase class-I HKJ31_02400 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HKJ31_02405 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HKJ31_02405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKJ31_02405 PF02142 MGS-like domain HKJ31_02410 PF03449 Transcription elongation factor, N-terminal HKJ31_02410 PF01272 Transcription elongation factor, GreA/GreB, C-term HKJ31_02420 PF01368 DHH family HKJ31_02420 PF02272 DHHA1 domain HKJ31_02420 PF17768 RecJ OB domain HKJ31_02430 PF00152 tRNA synthetases class II (D, K and N) HKJ31_02430 PF01336 OB-fold nucleic acid binding domain HKJ31_02435 PF00072 Response regulator receiver domain HKJ31_02440 PF00512 His Kinase A (phospho-acceptor) domain HKJ31_02440 PF01627 Hpt domain HKJ31_02440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_02440 PF00072 Response regulator receiver domain HKJ31_02445 PF00378 Enoyl-CoA hydratase/isomerase HKJ31_02450 PF00696 Amino acid kinase family HKJ31_02450 PF01842 ACT domain HKJ31_02460 PF08245 Mur ligase middle domain HKJ31_02470 PF00293 NUDIX domain HKJ31_02475 PF02219 Methylenetetrahydrofolate reductase HKJ31_02485 PF02545 Maf-like protein HKJ31_02490 PF00575 S1 RNA binding domain HKJ31_02490 PF10150 Ribonuclease E/G family HKJ31_02500 PF01523 Putative modulator of DNA gyrase HKJ31_02505 PF04751 Protein of unknown function (DUF615) HKJ31_02510 PF01523 Putative modulator of DNA gyrase HKJ31_02515 PF03466 LysR substrate binding domain HKJ31_02515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKJ31_02530 PF08240 Alcohol dehydrogenase GroES-like domain HKJ31_02530 PF00107 Zinc-binding dehydrogenase HKJ31_02540 PF00132 Bacterial transferase hexapeptide (six repeats) HKJ31_02540 PF14602 Hexapeptide repeat of succinyl-transferase HKJ31_02540 PF12804 MobA-like NTP transferase domain HKJ31_02550 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HKJ31_02550 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HKJ31_02555 PF02874 ATP synthase alpha/beta family, beta-barrel domain HKJ31_02555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKJ31_02560 PF00231 ATP synthase HKJ31_02565 PF02874 ATP synthase alpha/beta family, beta-barrel domain HKJ31_02565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKJ31_02565 PF00306 ATP synthase alpha/beta chain, C terminal domain HKJ31_02570 PF00213 ATP synthase delta (OSCP) subunit HKJ31_02575 PF00430 ATP synthase B/B' CF(0) HKJ31_02580 PF00137 ATP synthase subunit C HKJ31_02585 PF00119 ATP synthase A chain HKJ31_02595 PF00338 Ribosomal protein S10p/S20e HKJ31_02600 PF00297 Ribosomal protein L3 HKJ31_02605 PF00573 Ribosomal protein L4/L1 family HKJ31_02610 PF00276 Ribosomal protein L23 HKJ31_02615 PF03947 Ribosomal Proteins L2, C-terminal domain HKJ31_02615 PF00181 Ribosomal Proteins L2, RNA binding domain HKJ31_02620 PF00203 Ribosomal protein S19 HKJ31_02625 PF00237 Ribosomal protein L22p/L17e HKJ31_02630 PF00189 Ribosomal protein S3, C-terminal domain HKJ31_02630 PF07650 KH domain HKJ31_02635 PF00252 Ribosomal protein L16p/L10e HKJ31_02640 PF00831 Ribosomal L29 protein HKJ31_02645 PF00366 Ribosomal protein S17 HKJ31_02650 PF00238 Ribosomal protein L14p/L23e HKJ31_02655 PF00467 KOW motif HKJ31_02655 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HKJ31_02660 PF00281 Ribosomal protein L5 HKJ31_02660 PF00673 ribosomal L5P family C-terminus HKJ31_02665 PF00253 Ribosomal protein S14p/S29e HKJ31_02670 PF00410 Ribosomal protein S8 HKJ31_02675 PF00347 Ribosomal protein L6 HKJ31_02680 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HKJ31_02685 PF00333 Ribosomal protein S5, N-terminal domain HKJ31_02685 PF03719 Ribosomal protein S5, C-terminal domain HKJ31_02690 PF00327 Ribosomal protein L30p/L7e HKJ31_02695 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HKJ31_02700 PF00344 SecY translocase HKJ31_02705 PF00416 Ribosomal protein S13/S18 HKJ31_02710 PF00411 Ribosomal protein S11 HKJ31_02715 PF00163 Ribosomal protein S4/S9 N-terminal domain HKJ31_02715 PF01479 S4 domain HKJ31_02720 PF01000 RNA polymerase Rpb3/RpoA insert domain HKJ31_02720 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HKJ31_02720 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HKJ31_02725 PF01196 Ribosomal protein L17 HKJ31_02730 PF04380 Membrane fusogenic activity HKJ31_02735 PF13335 Magnesium chelatase, subunit ChlI C-terminal HKJ31_02735 PF01078 Magnesium chelatase, subunit ChlI HKJ31_02755 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HKJ31_02755 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HKJ31_02755 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HKJ31_02770 PF05697 Bacterial trigger factor protein (TF) HKJ31_02770 PF05698 Bacterial trigger factor protein (TF) C-terminus HKJ31_02775 PF00574 Clp protease HKJ31_02780 PF06689 ClpX C4-type zinc finger HKJ31_02780 PF07724 AAA domain (Cdc48 subfamily) HKJ31_02780 PF10431 C-terminal, D2-small domain, of ClpB protein HKJ31_02785 PF05362 Lon protease (S16) C-terminal proteolytic domain HKJ31_02785 PF02190 ATP-dependent protease La (LON) substrate-binding domain HKJ31_02785 PF00004 ATPase family associated with various cellular activities (AAA) HKJ31_02790 PF00216 Bacterial DNA-binding protein HKJ31_02815 PF03477 ATP cone domain HKJ31_02815 PF02867 Ribonucleotide reductase, barrel domain HKJ31_02815 PF00317 Ribonucleotide reductase, all-alpha domain HKJ31_02820 PF00268 Ribonucleotide reductase, small chain HKJ31_02835 PF01479 S4 domain HKJ31_02835 PF00849 RNA pseudouridylate synthase HKJ31_02840 PF13419 Haloacid dehalogenase-like hydrolase HKJ31_02850 PF00830 Ribosomal L28 family HKJ31_02855 PF00471 Ribosomal protein L33 HKJ31_02860 PF13091 PLD-like domain HKJ31_02860 PF13396 Phospholipase_D-nuclease N-terminal HKJ31_02865 PF02798 Glutathione S-transferase, N-terminal domain HKJ31_02865 PF00043 Glutathione S-transferase, C-terminal domain HKJ31_02870 PF00056 lactate/malate dehydrogenase, NAD binding domain HKJ31_02870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HKJ31_02875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HKJ31_02890 PF00529 HlyD membrane-fusion protein of T1SS HKJ31_02890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKJ31_02915 PF00664 ABC transporter transmembrane region HKJ31_02915 PF03412 Peptidase C39 family HKJ31_02915 PF00005 ABC transporter HKJ31_02920 PF01061 ABC-2 type transporter HKJ31_02925 PF00005 ABC transporter HKJ31_02930 PF05567 Neisseria PilC beta-propeller domain HKJ31_02950 PF04408 Helicase associated domain (HA2) HKJ31_02950 PF08482 ATP-dependent helicase C-terminal HKJ31_02950 PF00271 Helicase conserved C-terminal domain HKJ31_02950 PF00270 DEAD/DEAH box helicase HKJ31_02965 PF13185 GAF domain HKJ31_02975 PF17243 POTRA domain TamA domain 1 HKJ31_02975 PF01103 Surface antigen HKJ31_02980 PF04357 TamB, inner membrane protein subunit of TAM complex HKJ31_03035 PF05973 Phage derived protein Gp49-like (DUF891) HKJ31_03040 PF01381 Helix-turn-helix HKJ31_03085 PF10876 Phage tail assemb.y chaperone protein, TAC HKJ31_03140 PF04233 Phage Mu protein F like protein HKJ31_03145 PF06381 Protein of unknown function (DUF1073) HKJ31_03175 PF00959 Phage lysozyme HKJ31_03190 PF00772 DnaB-like helicase N terminal domain HKJ31_03190 PF03796 DnaB-like helicase C terminal domain HKJ31_03205 PF02498 BRO family, N-terminal domain HKJ31_03205 PF10548 P22AR C-terminal domain HKJ31_03210 PF02498 BRO family, N-terminal domain HKJ31_03210 PF10548 P22AR C-terminal domain HKJ31_03250 PF17841 BID domain of Bartonella effector protein (Bep) HKJ31_03250 PF02661 Fic/DOC family HKJ31_03255 PF18495 Antitoxin VbhA HKJ31_03300 PF10065 Uncharacterized conserved protein (DUF2303) HKJ31_03320 PF00436 Single-strand binding protein family HKJ31_03375 PF00694 Aconitase C-terminal domain HKJ31_03375 PF00330 Aconitase family (aconitate hydratase) HKJ31_03380 PF04303 PrpF protein HKJ31_03410 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain HKJ31_03410 PF00207 Alpha-2-macroglobulin family HKJ31_03410 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HKJ31_03410 PF07703 Alpha-2-macroglobulin bait region domain HKJ31_03410 PF01835 MG2 domain HKJ31_03410 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HKJ31_03410 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HKJ31_03410 PF17962 Bacterial macroglobulin domain 6 HKJ31_03415 PF07859 alpha/beta hydrolase fold HKJ31_03420 PF12833 Helix-turn-helix domain HKJ31_03420 PF12852 Cupin HKJ31_03430 PF00929 Exonuclease HKJ31_03435 PF05552 Conserved TM helix HKJ31_03435 PF00924 Mechanosensitive ion channel HKJ31_03440 PF02896 PEP-utilising enzyme, TIM barrel domain HKJ31_03440 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HKJ31_03440 PF00391 PEP-utilising enzyme, mobile domain HKJ31_03445 PF03618 Kinase/pyrophosphorylase HKJ31_03465 PF00553 Cellulose binding domain HKJ31_03465 PF00041 Fibronectin type III domain HKJ31_03465 PF01341 Glycosyl hydrolases family 6 HKJ31_03470 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HKJ31_03470 PF04055 Radical SAM superfamily HKJ31_03475 PF03099 Biotin/lipoate A/B protein ligase family HKJ31_03480 PF04359 Protein of unknown function (DUF493) HKJ31_03505 PF04286 Protein of unknown function (DUF445) HKJ31_03510 PF01595 Cyclin M transmembrane N-terminal domain HKJ31_03510 PF03471 Transporter associated domain HKJ31_03510 PF00571 CBS domain HKJ31_03525 PF00204 DNA gyrase B HKJ31_03525 PF01751 Toprim domain HKJ31_03525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_03525 PF00986 DNA gyrase B subunit, carboxyl terminus HKJ31_03535 PF06418 CTP synthase N-terminus HKJ31_03535 PF00117 Glutamine amidotransferase class-I HKJ31_03540 PF00793 DAHP synthetase I family HKJ31_03545 PF03952 Enolase, N-terminal domain HKJ31_03545 PF00113 Enolase, C-terminal TIM barrel domain HKJ31_03550 PF04977 Septum formation initiator HKJ31_03555 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HKJ31_03560 PF02542 YgbB family HKJ31_03565 PF01713 Smr domain HKJ31_03590 PF03886 ABC-type transport auxiliary lipoprotein component HKJ31_03590 PF02470 MlaD protein HKJ31_03595 PF00005 ABC transporter HKJ31_03600 PF02405 Permease MlaE HKJ31_03635 PF00436 Single-strand binding protein family HKJ31_03660 PF07963 Prokaryotic N-terminal methylation motif HKJ31_03770 PF00239 Resolvase, N terminal domain HKJ31_03775 PF01385 Probable transposase HKJ31_03775 PF07282 Putative transposase DNA-binding domain HKJ31_03775 PF12323 Helix-turn-helix domain HKJ31_03825 PF04085 rod shape-determining protein MreC HKJ31_03830 PF04093 rod shape-determining protein MreD HKJ31_03835 PF03717 Penicillin-binding Protein dimerisation domain HKJ31_03835 PF00905 Penicillin binding protein transpeptidase domain HKJ31_03840 PF01098 Cell cycle protein HKJ31_03845 PF02547 Queuosine biosynthesis protein HKJ31_03850 PF04607 Region found in RelA / SpoT proteins HKJ31_03850 PF13291 ACT domain HKJ31_03850 PF02824 TGS domain HKJ31_03865 PF03776 Septum formation topological specificity factor MinE HKJ31_03870 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HKJ31_03875 PF03775 Septum formation inhibitor MinC, C-terminal domain HKJ31_03875 PF05209 Septum formation inhibitor MinC, N-terminal domain HKJ31_03890 PF00730 HhH-GPD superfamily base excision DNA repair protein HKJ31_03905 PF04264 YceI-like domain HKJ31_03910 PF00072 Response regulator receiver domain HKJ31_03910 PF01627 Hpt domain HKJ31_03910 PF00512 His Kinase A (phospho-acceptor) domain HKJ31_03910 PF00672 HAMP domain HKJ31_03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_03910 PF17149 Periplasmic sensor domain found in signal transduction proteins HKJ31_03915 PF01208 Uroporphyrinogen decarboxylase (URO-D) HKJ31_03920 PF01761 3-dehydroquinate synthase HKJ31_03925 PF01202 Shikimate kinase HKJ31_03930 PF01243 Pyridoxamine 5'-phosphate oxidase HKJ31_03930 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HKJ31_03935 PF00749 tRNA synthetases class I (E and Q), catalytic domain HKJ31_03935 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HKJ31_03945 PF03932 CutC family HKJ31_03960 PF00528 Binding-protein-dependent transport system inner membrane component HKJ31_03965 PF00528 Binding-protein-dependent transport system inner membrane component HKJ31_03970 PF00005 ABC transporter HKJ31_03970 PF12857 TOBE-like domain HKJ31_03980 PF04545 Sigma-70, region 4 HKJ31_03980 PF04539 Sigma-70 region 3 HKJ31_03980 PF00140 Sigma-70 factor, region 1.2 HKJ31_03980 PF04542 Sigma-70 region 2 HKJ31_03980 PF03979 Sigma-70 factor, region 1.1 HKJ31_03980 PF04546 Sigma-70, non-essential region HKJ31_03985 PF03989 DNA gyrase C-terminal domain, beta-propeller HKJ31_03985 PF00521 DNA gyrase/topoisomerase IV, subunit A HKJ31_03990 PF01047 MarR family HKJ31_04000 PF12697 Alpha/beta hydrolase family HKJ31_04005 PF00155 Aminotransferase class I and II HKJ31_04015 PF01040 UbiA prenyltransferase family HKJ31_04020 PF00753 Metallo-beta-lactamase superfamily HKJ31_04025 PF01743 Poly A polymerase head domain HKJ31_04025 PF01966 HD domain HKJ31_04025 PF12627 Probable RNA and SrmB- binding site of polymerase A HKJ31_04030 PF01464 Transglycosylase SLT domain HKJ31_04030 PF14718 Soluble lytic murein transglycosylase L domain HKJ31_04035 PF02666 Phosphatidylserine decarboxylase HKJ31_04040 PF02630 SCO1/SenC HKJ31_04045 PF05175 Methyltransferase small domain HKJ31_04050 PF01264 Chorismate synthase HKJ31_04060 PF01118 Semialdehyde dehydrogenase, NAD binding domain HKJ31_04060 PF02774 Semialdehyde dehydrogenase, dimerisation domain HKJ31_04070 PF01416 tRNA pseudouridine synthase HKJ31_04075 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HKJ31_04080 PF00291 Pyridoxal-phosphate dependent enzyme HKJ31_04085 PF00290 Tryptophan synthase alpha chain HKJ31_04090 PF18073 Rubredoxin metal binding domain HKJ31_04095 PF00296 Luciferase-like monooxygenase HKJ31_04105 PF00270 DEAD/DEAH box helicase HKJ31_04105 PF00271 Helicase conserved C-terminal domain HKJ31_04105 PF09382 RQC domain HKJ31_04105 PF16124 RecQ zinc-binding HKJ31_04105 PF00570 HRDC domain HKJ31_04110 PF00210 Ferritin-like domain HKJ31_04115 PF00270 DEAD/DEAH box helicase HKJ31_04115 PF11898 Domain of unknown function (DUF3418) HKJ31_04115 PF04408 Helicase associated domain (HA2) HKJ31_04115 PF00271 Helicase conserved C-terminal domain HKJ31_04115 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HKJ31_04120 PF02347 Glycine cleavage system P-protein HKJ31_04125 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HKJ31_04130 PF00510 Cytochrome c oxidase subunit III HKJ31_04135 PF00115 Cytochrome C and Quinol oxidase polypeptide I HKJ31_04140 PF06481 COX Aromatic Rich Motif HKJ31_04140 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HKJ31_04145 PF00348 Polyprenyl synthetase HKJ31_04150 PF00436 Single-strand binding protein family HKJ31_04165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKJ31_04190 PF00391 PEP-utilising enzyme, mobile domain HKJ31_04190 PF05524 PEP-utilising enzyme, N-terminal HKJ31_04190 PF02896 PEP-utilising enzyme, TIM barrel domain HKJ31_04195 PF00381 PTS HPr component phosphorylation site HKJ31_04205 PF03668 P-loop ATPase protein family HKJ31_04210 PF02603 HPr Serine kinase N terminus HKJ31_04210 PF07475 HPr Serine kinase C-terminal domain HKJ31_04215 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HKJ31_04220 PF00309 Sigma-54 factor, Activator interacting domain (AID) HKJ31_04220 PF04552 Sigma-54, DNA binding domain HKJ31_04220 PF04963 Sigma-54 factor, core binding domain HKJ31_04225 PF12399 Branched-chain amino acid ATP-binding cassette transporter HKJ31_04225 PF00005 ABC transporter HKJ31_04245 PF01380 SIS domain HKJ31_04245 PF00571 CBS domain HKJ31_04250 PF01722 BolA-like protein HKJ31_04255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HKJ31_04285 PF02769 AIR synthase related protein, C-terminal domain HKJ31_04285 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HKJ31_04285 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HKJ31_04290 PF10411 Disulfide bond isomerase protein N-terminus HKJ31_04290 PF13098 Thioredoxin-like domain HKJ31_04295 PF00589 Phage integrase family HKJ31_04295 PF02899 Phage integrase, N-terminal SAM-like domain HKJ31_04300 PF00520 Ion transport protein HKJ31_04300 PF00027 Cyclic nucleotide-binding domain HKJ31_04305 PF00202 Aminotransferase class-III HKJ31_04310 PF04107 Glutamate-cysteine ligase family 2(GCS2) HKJ31_04315 PF01926 50S ribosome-binding GTPase HKJ31_04330 PF01323 DSBA-like thioredoxin domain HKJ31_04335 PF01323 DSBA-like thioredoxin domain HKJ31_04345 PF04356 Protein of unknown function (DUF489) HKJ31_04355 PF00293 NUDIX domain HKJ31_04360 PF02617 ATP-dependent Clp protease adaptor protein ClpS HKJ31_04365 PF02861 Clp amino terminal domain, pathogenicity island component HKJ31_04365 PF07724 AAA domain (Cdc48 subfamily) HKJ31_04365 PF17871 AAA lid domain HKJ31_04365 PF00004 ATPase family associated with various cellular activities (AAA) HKJ31_04365 PF10431 C-terminal, D2-small domain, of ClpB protein HKJ31_04370 PF01176 Translation initiation factor 1A / IF-1 HKJ31_04375 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HKJ31_04385 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKJ31_04390 PF01580 FtsK/SpoIIIE family HKJ31_04390 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HKJ31_04390 PF17854 FtsK alpha domain HKJ31_04390 PF09397 Ftsk gamma domain HKJ31_04400 PF03548 Outer membrane lipoprotein carrier protein LolA HKJ31_04405 PF16193 AAA C-terminal domain HKJ31_04405 PF12002 MgsA AAA+ ATPase C terminal HKJ31_04405 PF00004 ATPase family associated with various cellular activities (AAA) HKJ31_04410 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HKJ31_04415 PF00512 His Kinase A (phospho-acceptor) domain HKJ31_04415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_04420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HKJ31_04440 PF02685 Glucokinase HKJ31_04450 PF07690 Major Facilitator Superfamily HKJ31_04455 PF00356 Bacterial regulatory proteins, lacI family HKJ31_04460 PF01380 SIS domain HKJ31_04465 PF01979 Amidohydrolase family HKJ31_04470 PF01039 Carboxyl transferase domain HKJ31_04470 PF17848 Acetyl-coA carboxylase zinc finger domain HKJ31_04475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKJ31_04475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKJ31_04475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKJ31_04475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKJ31_04480 PF01522 Polysaccharide deacetylase HKJ31_04485 PF13439 Glycosyltransferase Family 4 HKJ31_04485 PF00534 Glycosyl transferases group 1 HKJ31_04495 PF00355 Rieske [2Fe-2S] domain HKJ31_04500 PF00266 Aminotransferase class-V HKJ31_04505 PF01458 Uncharacterized protein family (UPF0051) HKJ31_04510 PF00005 ABC transporter HKJ31_04515 PF01458 Uncharacterized protein family (UPF0051) HKJ31_04520 PF02082 Transcriptional regulator HKJ31_04530 PF00326 Prolyl oligopeptidase family HKJ31_04530 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HKJ31_04540 PF01678 Diaminopimelate epimerase HKJ31_04550 PF02899 Phage integrase, N-terminal SAM-like domain HKJ31_04550 PF00589 Phage integrase family HKJ31_04555 PF00227 Proteasome subunit HKJ31_04560 PF00004 ATPase family associated with various cellular activities (AAA) HKJ31_04560 PF10431 C-terminal, D2-small domain, of ClpB protein HKJ31_04560 PF07724 AAA domain (Cdc48 subfamily) HKJ31_04570 PF01209 ubiE/COQ5 methyltransferase family HKJ31_04575 PF11838 ERAP1-like C-terminal domain HKJ31_04575 PF01433 Peptidase family M1 domain HKJ31_04595 PF13369 Transglutaminase-like superfamily HKJ31_04610 PF01507 Phosphoadenosine phosphosulfate reductase family HKJ31_04615 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HKJ31_04615 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HKJ31_04620 PF00667 FAD binding domain HKJ31_04620 PF00258 Flavodoxin HKJ31_04620 PF00175 Oxidoreductase NAD-binding domain HKJ31_04625 PF01507 Phosphoadenosine phosphosulfate reductase family HKJ31_04630 PF00009 Elongation factor Tu GTP binding domain HKJ31_04635 PF01192 RNA polymerase Rpb6 HKJ31_04640 PF00625 Guanylate kinase HKJ31_04645 PF03755 YicC-like family, N-terminal region HKJ31_04645 PF08340 Domain of unknown function (DUF1732) HKJ31_04650 PF01138 3' exoribonuclease family, domain 1 HKJ31_04650 PF03725 3' exoribonuclease family, domain 2 HKJ31_04655 PF01725 Ham1 family HKJ31_04660 PF04055 Radical SAM superfamily HKJ31_04660 PF06969 HemN C-terminal domain HKJ31_04675 PF00561 alpha/beta hydrolase fold HKJ31_04680 PF17827 PrmC N-terminal domain HKJ31_04680 PF05175 Methyltransferase small domain HKJ31_04695 PF13018 Extended Signal Peptide of Type V secretion system HKJ31_04695 PF03895 YadA-like membrane anchor domain HKJ31_04695 PF05658 Head domain of trimeric autotransporter adhesin HKJ31_04695 PF05662 Coiled stalk of trimeric autotransporter adhesin HKJ31_04700 PF00437 Type II/IV secretion system protein HKJ31_04700 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HKJ31_04705 PF00482 Type II secretion system (T2SS), protein F HKJ31_04710 PF08334 Type II secretion system (T2SS), protein G HKJ31_04715 PF12019 Type II transport protein GspH HKJ31_04720 PF07963 Prokaryotic N-terminal methylation motif HKJ31_04730 PF03934 Type II secretion system (T2SS), protein K HKJ31_04735 PF05137 Fimbrial assembly protein (PilN) HKJ31_04740 PF10741 Type II secretion system (T2SS), protein M subtype b HKJ31_04750 PF00263 Bacterial type II and III secretion system protein HKJ31_04750 PF03958 Bacterial type II/III secretion system short domain HKJ31_04760 PF03895 YadA-like membrane anchor domain HKJ31_04760 PF05662 Coiled stalk of trimeric autotransporter adhesin HKJ31_04760 PF05658 Head domain of trimeric autotransporter adhesin HKJ31_04765 PF00578 AhpC/TSA family HKJ31_04765 PF10417 C-terminal domain of 1-Cys peroxiredoxin HKJ31_04770 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKJ31_04770 PF13192 Thioredoxin domain HKJ31_04775 PF03466 LysR substrate binding domain HKJ31_04775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKJ31_04780 PF00814 Glycoprotease family HKJ31_04785 PF01197 Ribosomal protein L31 HKJ31_04790 PF00285 Citrate synthase, C-terminal domain HKJ31_04795 PF00380 Ribosomal protein S9/S16 HKJ31_04800 PF00572 Ribosomal protein L13 HKJ31_04805 PF03232 Ubiquinone biosynthesis protein COQ7 HKJ31_04810 PF02675 S-adenosylmethionine decarboxylase HKJ31_04815 PF00027 Cyclic nucleotide-binding domain HKJ31_04815 PF00325 Bacterial regulatory proteins, crp family HKJ31_04850 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKJ31_04850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKJ31_04860 PF02817 e3 binding domain HKJ31_04860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HKJ31_04860 PF00364 Biotin-requiring enzyme HKJ31_04865 PF16078 2-oxoglutarate dehydrogenase N-terminus HKJ31_04865 PF00676 Dehydrogenase E1 component HKJ31_04865 PF16870 2-oxoglutarate dehydrogenase C-terminal HKJ31_04865 PF02779 Transketolase, pyrimidine binding domain HKJ31_04870 PF08007 Cupin superfamily protein HKJ31_04875 PF08328 Adenylosuccinate lyase C-terminal HKJ31_04875 PF00206 Lyase HKJ31_04880 PF10415 Fumarase C C-terminus HKJ31_04880 PF00206 Lyase HKJ31_04895 PF07963 Prokaryotic N-terminal methylation motif HKJ31_04895 PF00114 Pilin (bacterial filament) HKJ31_04980 PF00959 Phage lysozyme HKJ31_04985 PF01555 DNA methylase HKJ31_05040 PF01134 Glucose inhibited division protein A HKJ31_05040 PF13932 GidA associated domain HKJ31_05065 PF13649 Methyltransferase domain HKJ31_05080 PF02649 Type I GTP cyclohydrolase folE2 HKJ31_05085 PF00132 Bacterial transferase hexapeptide (six repeats) HKJ31_05090 PF00873 AcrB/AcrD/AcrF family HKJ31_05095 PF00529 HlyD membrane-fusion protein of T1SS HKJ31_05095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKJ31_05100 PF05088 Bacterial NAD-glutamate dehydrogenase HKJ31_05105 PF01513 ATP-NAD kinase HKJ31_05120 PF00239 Resolvase, N terminal domain HKJ31_05120 PF02796 Helix-turn-helix domain of resolvase HKJ31_05125 PF00440 Bacterial regulatory proteins, tetR family HKJ31_05135 PF00873 AcrB/AcrD/AcrF family HKJ31_05145 PF08401 Domain of unknown function (DUF1738) HKJ31_05145 PF13362 Toprim domain HKJ31_05145 PF18818 Metallopeptidase superfamily domain HKJ31_05180 PF12706 Beta-lactamase superfamily domain HKJ31_05190 PF00929 Exonuclease HKJ31_05190 PF08411 Exonuclease C-terminal HKJ31_05200 PF00999 Sodium/hydrogen exchanger family HKJ31_05210 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HKJ31_05220 PF01812 5-formyltetrahydrofolate cyclo-ligase family HKJ31_05230 PF05164 Cell division protein ZapA HKJ31_05240 PF03695 Uncharacterised protein family (UPF0149) HKJ31_05245 PF00557 Metallopeptidase family M24 HKJ31_05245 PF05195 Aminopeptidase P, N-terminal domain HKJ31_05250 PF00293 NUDIX domain HKJ31_05255 PF00881 Nitroreductase family HKJ31_05290 PF01063 Amino-transferase class IV HKJ31_05295 PF02954 Bacterial regulatory protein, Fis family HKJ31_05305 PF01381 Helix-turn-helix HKJ31_05315 PF00535 Glycosyl transferase family 2 HKJ31_05325 PF00925 GTP cyclohydrolase II HKJ31_05340 PF17876 Cold shock domain HKJ31_05340 PF08461 Ribonuclease R winged-helix domain HKJ31_05340 PF08206 Ribonuclease B OB domain HKJ31_05340 PF00773 RNB domain HKJ31_05340 PF00575 S1 RNA binding domain HKJ31_05345 PF08032 RNA 2'-O ribose methyltransferase substrate binding HKJ31_05345 PF00588 SpoU rRNA Methylase family HKJ31_05350 PF00132 Bacterial transferase hexapeptide (six repeats) HKJ31_05355 PF01227 GTP cyclohydrolase I HKJ31_05360 PF03895 YadA-like membrane anchor domain HKJ31_05360 PF05662 Coiled stalk of trimeric autotransporter adhesin HKJ31_05360 PF05658 Head domain of trimeric autotransporter adhesin HKJ31_05365 PF03186 CobD/Cbib protein HKJ31_05370 PF12805 FUSC-like inner membrane protein yccS HKJ31_05375 PF02843 Phosphoribosylglycinamide synthetase, C domain HKJ31_05375 PF02844 Phosphoribosylglycinamide synthetase, N domain HKJ31_05375 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HKJ31_05380 PF01808 AICARFT/IMPCHase bienzyme HKJ31_05380 PF02142 MGS-like domain HKJ31_05405 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HKJ31_05405 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HKJ31_05425 PF00561 alpha/beta hydrolase fold HKJ31_05430 PF03692 Putative zinc- or iron-chelating domain HKJ31_05435 PF02540 NAD synthase HKJ31_05435 PF00795 Carbon-nitrogen hydrolase HKJ31_05440 PF02091 Glycyl-tRNA synthetase alpha subunit HKJ31_05445 PF02092 Glycyl-tRNA synthetase beta subunit HKJ31_05445 PF05746 DALR anticodon binding domain HKJ31_05460 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HKJ31_05460 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HKJ31_05465 PF00072 Response regulator receiver domain HKJ31_05470 PF01584 CheW-like domain HKJ31_05475 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HKJ31_05475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKJ31_05480 PF02895 Signal transducing histidine kinase, homodimeric domain HKJ31_05480 PF01584 CheW-like domain HKJ31_05480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_05480 PF01627 Hpt domain HKJ31_05480 PF00072 Response regulator receiver domain HKJ31_05495 PF00156 Phosphoribosyl transferase domain HKJ31_05510 PF02875 Mur ligase family, glutamate ligase domain HKJ31_05510 PF08245 Mur ligase middle domain HKJ31_05520 PF01432 Peptidase family M3 HKJ31_05535 PF01625 Peptide methionine sulfoxide reductase HKJ31_05545 PF00456 Transketolase, thiamine diphosphate binding domain HKJ31_05545 PF02780 Transketolase, C-terminal domain HKJ31_05545 PF02779 Transketolase, pyrimidine binding domain HKJ31_05550 PF02527 rRNA small subunit methyltransferase G HKJ31_05555 PF01648 4'-phosphopantetheinyl transferase superfamily HKJ31_05565 PF13700 Domain of unknown function (DUF4158) HKJ31_05565 PF01526 Tn3 transposase DDE domain HKJ31_05580 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HKJ31_05580 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HKJ31_05585 PF00890 FAD binding domain HKJ31_05585 PF02910 Fumarate reductase flavoprotein C-term HKJ31_05590 PF02445 Quinolinate synthetase A protein HKJ31_05595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HKJ31_05595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HKJ31_05625 PF04715 Anthranilate synthase component I, N terminal region HKJ31_05625 PF00425 chorismate binding enzyme HKJ31_05630 PF01026 TatD related DNase HKJ31_05645 PF02881 SRP54-type protein, helical bundle domain HKJ31_05645 PF00448 SRP54-type protein, GTPase domain HKJ31_05650 PF14815 NUDIX domain HKJ31_05650 PF00730 HhH-GPD superfamily base excision DNA repair protein HKJ31_05650 PF00633 Helix-hairpin-helix motif HKJ31_05655 PF04362 Bacterial Fe(2+) trafficking HKJ31_05665 PF01709 Transcriptional regulator HKJ31_05670 PF02075 Crossover junction endodeoxyribonuclease RuvC HKJ31_05675 PF01330 RuvA N terminal domain HKJ31_05675 PF07499 RuvA, C-terminal domain HKJ31_05680 PF02705 K+ potassium transporter HKJ31_05685 PF17864 RuvB AAA lid domain HKJ31_05685 PF05496 Holliday junction DNA helicase RuvB P-loop domain HKJ31_05685 PF05491 RuvB C-terminal winged helix domain HKJ31_05690 PF03061 Thioesterase superfamily HKJ31_05695 PF01618 MotA/TolQ/ExbB proton channel family HKJ31_05700 PF02472 Biopolymer transport protein ExbD/TolR HKJ31_05710 PF07676 WD40-like Beta Propeller Repeat HKJ31_05710 PF04052 TolB amino-terminal domain HKJ31_05715 PF00691 OmpA family HKJ31_05725 PF04055 Radical SAM superfamily HKJ31_05730 PF00300 Histidine phosphatase superfamily (branch 1) HKJ31_05735 PF04493 Endonuclease V HKJ31_05740 PF00854 POT family HKJ31_05745 PF00255 Glutathione peroxidase HKJ31_05750 PF00175 Oxidoreductase NAD-binding domain HKJ31_05750 PF00970 Oxidoreductase FAD-binding domain HKJ31_05755 PF13667 ThiC-associated domain HKJ31_05755 PF01964 Radical SAM ThiC family HKJ31_05760 PF10459 Peptidase S46 HKJ31_05765 PF00300 Histidine phosphatase superfamily (branch 1) HKJ31_05830 PF00589 Phage integrase family HKJ31_05915 PF06508 Queuosine biosynthesis protein QueC HKJ31_05920 PF01336 OB-fold nucleic acid binding domain HKJ31_05920 PF02938 GAD domain HKJ31_05920 PF00152 tRNA synthetases class II (D, K and N) HKJ31_05925 PF05681 Fumarate hydratase (Fumerase) HKJ31_05925 PF05683 Fumarase C-terminus HKJ31_05945 PF03797 Autotransporter beta-domain HKJ31_05945 PF00082 Subtilase family HKJ31_05945 PF12951 Passenger-associated-transport-repeat HKJ31_05960 PF00512 His Kinase A (phospho-acceptor) domain HKJ31_05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_05960 PF00989 PAS fold HKJ31_05965 PF00072 Response regulator receiver domain HKJ31_05965 PF00158 Sigma-54 interaction domain HKJ31_05965 PF02954 Bacterial regulatory protein, Fis family HKJ31_05980 PF00909 Ammonium Transporter Family HKJ31_05985 PF00543 Nitrogen regulatory protein P-II HKJ31_05990 PF03951 Glutamine synthetase, beta-Grasp domain HKJ31_05990 PF00120 Glutamine synthetase, catalytic domain HKJ31_05995 PF02673 Bacitracin resistance protein BacA HKJ31_06000 PF04264 YceI-like domain HKJ31_06020 PF07055 Enoyl reductase FAD binding domain HKJ31_06020 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HKJ31_06020 PF12241 Trans-2-enoyl-CoA reductase catalytic region HKJ31_06030 PF03109 ABC1 family HKJ31_06040 PF00551 Formyl transferase HKJ31_06045 PF07683 Cobalamin synthesis protein cobW C-terminal domain HKJ31_06045 PF02492 CobW/HypB/UreG, nucleotide-binding domain HKJ31_06055 PF03969 AFG1-like ATPase HKJ31_06060 PF02566 OsmC-like protein HKJ31_06065 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family HKJ31_06070 PF11818 C-terminal domain of tail specific protease (DUF3340) HKJ31_06070 PF00595 PDZ domain HKJ31_06070 PF03572 Peptidase family S41 HKJ31_06070 PF17804 Tail specific protease N-terminal domain HKJ31_06075 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HKJ31_06075 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HKJ31_06080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKJ31_06080 PF00205 Thiamine pyrophosphate enzyme, central domain HKJ31_06080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKJ31_06090 PF00291 Pyridoxal-phosphate dependent enzyme HKJ31_06095 PF08502 LeuA allosteric (dimerisation) domain HKJ31_06095 PF00682 HMGL-like HKJ31_06100 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HKJ31_06100 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HKJ31_06105 PF01783 Ribosomal L32p protein family HKJ31_06110 PF02620 Large ribosomal RNA subunit accumulation protein YceD HKJ31_06120 PF07726 ATPase family associated with various cellular activities (AAA) HKJ31_06120 PF17863 AAA lid domain HKJ31_06130 PF11992 Domain of unknown function (DUF3488) HKJ31_06130 PF01841 Transglutaminase-like superfamily HKJ31_06130 PF13559 Domain of unknown function (DUF4129) HKJ31_06140 PF01230 HIT domain HKJ31_06145 PF02132 RecR protein HKJ31_06145 PF13662 Toprim domain HKJ31_06150 PF02575 YbaB/EbfC DNA-binding family HKJ31_06155 PF12169 DNA polymerase III subunits gamma and tau domain III HKJ31_06155 PF12170 DNA polymerase III tau subunit V interacting with alpha HKJ31_06155 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HKJ31_06180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HKJ31_06180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HKJ31_06185 PF02556 Preprotein translocase subunit SecB HKJ31_06190 PF00581 Rhodanese-like domain HKJ31_06215 PF03099 Biotin/lipoate A/B protein ligase family HKJ31_06215 PF08279 HTH domain HKJ31_06215 PF02237 Biotin protein ligase C terminal domain HKJ31_06220 PF03309 Type III pantothenate kinase HKJ31_06245 PF07963 Prokaryotic N-terminal methylation motif HKJ31_06260 PF01168 Alanine racemase, N-terminal domain HKJ31_06265 PF00488 MutS domain V HKJ31_06265 PF05190 MutS family domain IV HKJ31_06265 PF05192 MutS domain III HKJ31_06265 PF05188 MutS domain II HKJ31_06265 PF01624 MutS domain I HKJ31_06270 PF00912 Transglycosylase HKJ31_06275 PF01430 Hsp33 protein HKJ31_06290 PF01042 Endoribonuclease L-PSP HKJ31_06295 PF03706 Lysylphosphatidylglycerol synthase TM region HKJ31_06295 PF09924 Uncharacterised conserved protein (DUF2156) HKJ31_06305 PF00109 Beta-ketoacyl synthase, N-terminal domain HKJ31_06305 PF02801 Beta-ketoacyl synthase, C-terminal domain HKJ31_06315 PF00535 Glycosyl transferase family 2 HKJ31_06330 PF00437 Type II/IV secretion system protein HKJ31_06335 PF00437 Type II/IV secretion system protein HKJ31_06350 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HKJ31_06350 PF03900 Porphobilinogen deaminase, C-terminal domain HKJ31_06355 PF04397 LytTr DNA-binding domain HKJ31_06355 PF00072 Response regulator receiver domain HKJ31_06360 PF07694 5TMR of 5TMR-LYT HKJ31_06360 PF06580 Histidine kinase HKJ31_06365 PF02230 Phospholipase/Carboxylesterase HKJ31_06370 PF13632 Glycosyl transferase family group 2 HKJ31_06385 PF01209 ubiE/COQ5 methyltransferase family HKJ31_06400 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HKJ31_06405 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HKJ31_06415 PF00294 pfkB family carbohydrate kinase HKJ31_06420 PF07690 Major Facilitator Superfamily HKJ31_06430 PF04102 SlyX HKJ31_06435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HKJ31_06435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HKJ31_06435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HKJ31_06440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKJ31_06440 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HKJ31_06450 PF00005 ABC transporter HKJ31_06505 PF05973 Phage derived protein Gp49-like (DUF891) HKJ31_06510 PF01381 Helix-turn-helix HKJ31_06555 PF10876 Phage tail assemb.y chaperone protein, TAC HKJ31_06610 PF04233 Phage Mu protein F like protein HKJ31_06615 PF06381 Protein of unknown function (DUF1073) HKJ31_06645 PF00959 Phage lysozyme HKJ31_06660 PF01541 GIY-YIG catalytic domain HKJ31_06660 PF02151 UvrB/uvrC motif HKJ31_06660 PF08459 UvrC Helix-hairpin-helix N-terminal HKJ31_06665 PF01066 CDP-alcohol phosphatidyltransferase HKJ31_06690 PF00490 Delta-aminolevulinic acid dehydratase HKJ31_06695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKJ31_06710 PF00202 Aminotransferase class-III HKJ31_06715 PF10609 NUBPL iron-transfer P-loop NTPase HKJ31_06720 PF02348 Cytidylyltransferase HKJ31_06725 PF01451 Low molecular weight phosphotyrosine protein phosphatase HKJ31_06770 PF00436 Single-strand binding protein family HKJ31_06785 PF00005 ABC transporter HKJ31_06785 PF12848 ABC transporter HKJ31_06790 PF07715 TonB-dependent Receptor Plug Domain HKJ31_06790 PF00593 TonB dependent receptor HKJ31_06800 PF07715 TonB-dependent Receptor Plug Domain HKJ31_06800 PF00593 TonB dependent receptor HKJ31_06805 PF02254 TrkA-N domain HKJ31_06805 PF00999 Sodium/hydrogen exchanger family HKJ31_06810 PF12849 PBP superfamily domain HKJ31_06815 PF00528 Binding-protein-dependent transport system inner membrane component HKJ31_06820 PF00528 Binding-protein-dependent transport system inner membrane component HKJ31_06825 PF00005 ABC transporter HKJ31_06830 PF01895 PhoU domain HKJ31_06835 PF00929 Exonuclease HKJ31_06840 PF00398 Ribosomal RNA adenine dimethylase HKJ31_06845 PF04379 ApaG domain HKJ31_06850 PF00149 Calcineurin-like phosphoesterase HKJ31_06870 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HKJ31_06890 PF00929 Exonuclease HKJ31_06895 PF00075 RNase H HKJ31_06905 PF16123 Hydroxyacylglutathione hydrolase C-terminus HKJ31_06905 PF00753 Metallo-beta-lactamase superfamily HKJ31_06920 PF16921 Tex protein YqgF-like domain HKJ31_06920 PF00575 S1 RNA binding domain HKJ31_06920 PF17674 HHH domain HKJ31_06920 PF09371 Tex-like protein N-terminal domain HKJ31_06935 PF00719 Inorganic pyrophosphatase HKJ31_06940 PF00085 Thioredoxin HKJ31_06950 PF08264 Anticodon-binding domain of tRNA HKJ31_06950 PF00133 tRNA synthetases class I (I, L, M and V) HKJ31_06950 PF13603 Leucyl-tRNA synthetase, Domain 2 HKJ31_06965 PF01467 Cytidylyltransferase-like HKJ31_06990 PF13406 Transglycosylase SLT domain HKJ31_06995 PF03330 Lytic transglycolase HKJ31_06995 PF05036 Sporulation related domain HKJ31_07095 PF08207 Elongation factor P (EF-P) KOW-like domain HKJ31_07095 PF01132 Elongation factor P (EF-P) OB domain HKJ31_07095 PF09285 Elongation factor P, C-terminal HKJ31_07100 PF02913 FAD linked oxidases, C-terminal domain HKJ31_07100 PF01565 FAD binding domain HKJ31_07105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKJ31_07105 PF01842 ACT domain HKJ31_07105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKJ31_07110 PF13520 Amino acid permease HKJ31_07115 PF13520 Amino acid permease HKJ31_07120 PF00596 Class II Aldolase and Adducin N-terminal domain HKJ31_07125 PF03079 ARD/ARD' family HKJ31_07135 PF01502 Phosphoribosyl-AMP cyclohydrolase HKJ31_07135 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HKJ31_07140 PF00977 Histidine biosynthesis protein HKJ31_07145 PF00977 Histidine biosynthesis protein HKJ31_07150 PF00117 Glutamine amidotransferase class-I HKJ31_07155 PF00475 Imidazoleglycerol-phosphate dehydratase HKJ31_07160 PF00155 Aminotransferase class I and II HKJ31_07165 PF00815 Histidinol dehydrogenase HKJ31_07170 PF08029 HisG, C-terminal domain HKJ31_07170 PF01634 ATP phosphoribosyltransferase HKJ31_07180 PF13393 Histidyl-tRNA synthetase HKJ31_07180 PF03129 Anticodon binding domain HKJ31_07190 PF00291 Pyridoxal-phosphate dependent enzyme HKJ31_07190 PF14821 Threonine synthase N terminus HKJ31_07195 PF00288 GHMP kinases N terminal domain HKJ31_07195 PF08544 GHMP kinases C terminal HKJ31_07200 PF13840 ACT domain HKJ31_07200 PF00742 Homoserine dehydrogenase HKJ31_07200 PF03447 Homoserine dehydrogenase, NAD binding domain HKJ31_07200 PF00696 Amino acid kinase family HKJ31_07200 PF01842 ACT domain HKJ31_07205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HKJ31_07205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HKJ31_07210 PF03652 Holliday junction resolvase HKJ31_07215 PF02622 Uncharacterized ACR, COG1678 HKJ31_07220 PF00768 D-alanyl-D-alanine carboxypeptidase HKJ31_07220 PF07943 Penicillin-binding protein 5, C-terminal domain HKJ31_07230 PF00141 Peroxidase HKJ31_07235 PF01556 DnaJ C terminal domain HKJ31_07235 PF00226 DnaJ domain HKJ31_07245 PF00905 Penicillin binding protein transpeptidase domain HKJ31_07245 PF06832 Penicillin-Binding Protein C-terminus Family HKJ31_07245 PF00912 Transglycosylase HKJ31_07255 PF00593 TonB dependent receptor HKJ31_07255 PF07715 TonB-dependent Receptor Plug Domain HKJ31_07260 PF04542 Sigma-70 region 2 HKJ31_07260 PF08281 Sigma-70, region 4 HKJ31_07270 PF13180 PDZ domain HKJ31_07275 PF06421 GTP-binding protein LepA C-terminus HKJ31_07275 PF00679 Elongation factor G C-terminus HKJ31_07275 PF00009 Elongation factor Tu GTP binding domain HKJ31_07275 PF03144 Elongation factor Tu domain 2 HKJ31_07280 PF10502 Signal peptidase, peptidase S26 HKJ31_07290 PF00035 Double-stranded RNA binding motif HKJ31_07290 PF14622 Ribonuclease-III-like HKJ31_07295 PF07650 KH domain HKJ31_07295 PF01926 50S ribosome-binding GTPase HKJ31_07300 PF11967 Recombination protein O N terminal HKJ31_07300 PF02565 Recombination protein O C terminal HKJ31_07305 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HKJ31_07305 PF02779 Transketolase, pyrimidine binding domain HKJ31_07305 PF02780 Transketolase, C-terminal domain HKJ31_07310 PF00474 Sodium:solute symporter family HKJ31_07320 PF13193 AMP-binding enzyme C-terminal domain HKJ31_07320 PF00501 AMP-binding enzyme HKJ31_07320 PF16177 Acetyl-coenzyme A synthetase N-terminus HKJ31_07325 PF02659 Putative manganese efflux pump HKJ31_07340 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region HKJ31_07340 PF00326 Prolyl oligopeptidase family HKJ31_07340 PF07676 WD40-like Beta Propeller Repeat HKJ31_07345 PF03169 OPT oligopeptide transporter protein HKJ31_07355 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HKJ31_07355 PF01266 FAD dependent oxidoreductase HKJ31_07360 PF00230 Major intrinsic protein HKJ31_07365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HKJ31_07365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HKJ31_07375 PF01263 Aldose 1-epimerase HKJ31_07380 PF08267 Cobalamin-independent synthase, N-terminal domain HKJ31_07380 PF01717 Cobalamin-independent synthase, Catalytic domain HKJ31_07385 PF02677 Epoxyqueuosine reductase QueH HKJ31_07390 PF00857 Isochorismatase family HKJ31_07395 PF00501 AMP-binding enzyme HKJ31_07405 PF00535 Glycosyl transferase family 2 HKJ31_07410 PF01370 NAD dependent epimerase/dehydratase family HKJ31_07415 PF02195 ParB-like nuclease domain HKJ31_07415 PF17762 HTH domain found in ParB protein HKJ31_07420 PF13614 AAA domain HKJ31_07430 PF02403 Seryl-tRNA synthetase N-terminal domain HKJ31_07430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKJ31_07435 PF03544 Gram-negative bacterial TonB protein C-terminal HKJ31_07475 PF01555 DNA methylase HKJ31_07535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HKJ31_07540 PF01842 ACT domain HKJ31_07540 PF00800 Prephenate dehydratase HKJ31_07540 PF01817 Chorismate mutase type II HKJ31_07545 PF00266 Aminotransferase class-V HKJ31_07555 PF12679 ABC-2 family transporter protein HKJ31_07560 PF00005 ABC transporter HKJ31_07570 PF00186 Dihydrofolate reductase HKJ31_07575 PF00303 Thymidylate synthase HKJ31_07580 PF01790 Prolipoprotein diacylglyceryl transferase HKJ31_07585 PF01219 Prokaryotic diacylglycerol kinase HKJ31_07590 PF00486 Transcriptional regulatory protein, C terminal HKJ31_07590 PF00072 Response regulator receiver domain HKJ31_07600 PF02153 Prephenate dehydrogenase HKJ31_07600 PF01817 Chorismate mutase type II HKJ31_07605 PF00684 DnaJ central domain HKJ31_07605 PF01556 DnaJ C terminal domain HKJ31_07605 PF00226 DnaJ domain HKJ31_07610 PF00012 Hsp70 protein HKJ31_07615 PF01025 GrpE HKJ31_07620 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HKJ31_07620 PF01628 HrcA protein C terminal domain HKJ31_07625 PF02463 RecF/RecN/SMC N terminal domain HKJ31_07630 PF01475 Ferric uptake regulator family HKJ31_07635 PF04355 SmpA / OmlA family HKJ31_07640 PF03658 RnfH family Ubiquitin HKJ31_07650 PF01668 SmpB protein HKJ31_07660 PF00313 'Cold-shock' DNA-binding domain HKJ31_07665 PF01048 Phosphorylase superfamily HKJ31_07675 PF00933 Glycosyl hydrolase family 3 N terminal domain HKJ31_07680 PF01928 CYTH domain HKJ31_07685 PF05958 tRNA (Uracil-5-)-methyltransferase HKJ31_07690 PF00486 Transcriptional regulatory protein, C terminal HKJ31_07690 PF00072 Response regulator receiver domain HKJ31_07695 PF03808 Glycosyl transferase WecB/TagA/CpsF family HKJ31_07705 PF14667 Polysaccharide biosynthesis C-terminal domain HKJ31_07715 PF00534 Glycosyl transferases group 1 HKJ31_07715 PF13439 Glycosyltransferase Family 4 HKJ31_07730 PF02397 Bacterial sugar transferase HKJ31_07745 PF00180 Isocitrate/isopropylmalate dehydrogenase HKJ31_07750 PF00694 Aconitase C-terminal domain HKJ31_07755 PF00330 Aconitase family (aconitate hydratase) HKJ31_07775 PF14489 QueF-like protein HKJ31_07775 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HKJ31_07780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKJ31_07785 PF00873 AcrB/AcrD/AcrF family HKJ31_07790 PF00873 AcrB/AcrD/AcrF family HKJ31_07800 PF08240 Alcohol dehydrogenase GroES-like domain HKJ31_07800 PF00107 Zinc-binding dehydrogenase HKJ31_07820 PF00462 Glutaredoxin HKJ31_07825 PF01522 Polysaccharide deacetylase HKJ31_07845 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HKJ31_07855 PF02796 Helix-turn-helix domain of resolvase HKJ31_07855 PF00239 Resolvase, N terminal domain HKJ31_07860 PF12323 Helix-turn-helix domain HKJ31_07860 PF01385 Probable transposase HKJ31_07860 PF07282 Putative transposase DNA-binding domain HKJ31_07865 PF00239 Resolvase, N terminal domain HKJ31_07870 PF00155 Aminotransferase class I and II HKJ31_07875 PF00005 ABC transporter HKJ31_07875 PF03412 Peptidase C39 family HKJ31_07875 PF00664 ABC transporter transmembrane region HKJ31_07900 PF06594 Haemolysin-type calcium binding protein related domain HKJ31_07900 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKJ31_07920 PF02401 LytB protein HKJ31_07925 PF01252 Signal peptidase (SPase) II HKJ31_07930 PF08264 Anticodon-binding domain of tRNA HKJ31_07930 PF06827 Zinc finger found in FPG and IleRS HKJ31_07930 PF00133 tRNA synthetases class I (I, L, M and V) HKJ31_07935 PF06574 FAD synthetase HKJ31_07935 PF01687 Riboflavin kinase HKJ31_07940 PF03023 Lipid II flippase MurJ HKJ31_07945 PF01649 Ribosomal protein S20 HKJ31_07950 PF01018 GTP1/OBG HKJ31_07950 PF01926 50S ribosome-binding GTPase HKJ31_07955 PF01016 Ribosomal L27 protein HKJ31_07960 PF00829 Ribosomal prokaryotic L21 protein HKJ31_07965 PF17760 UvrA interaction domain HKJ31_07965 PF17755 UvrA DNA-binding domain HKJ31_07965 PF00005 ABC transporter HKJ31_07975 PF00958 GMP synthase C terminal domain HKJ31_07975 PF00117 Glutamine amidotransferase class-I HKJ31_07975 PF02540 NAD synthase HKJ31_07980 PF00478 IMP dehydrogenase / GMP reductase domain HKJ31_07980 PF00571 CBS domain HKJ31_07985 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HKJ31_07985 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HKJ31_07990 PF00483 Nucleotidyl transferase HKJ31_07995 PF02719 Polysaccharide biosynthesis protein HKJ31_08000 PF00953 Glycosyl transferase family 4 HKJ31_08005 PF18073 Rubredoxin metal binding domain HKJ31_08015 PF00216 Bacterial DNA-binding protein HKJ31_08020 PF00575 S1 RNA binding domain HKJ31_08025 PF02224 Cytidylate kinase HKJ31_08030 PF00444 Ribosomal protein L36 HKJ31_08040 PF04371 Porphyromonas-type peptidyl-arginine deiminase HKJ31_08045 PF00795 Carbon-nitrogen hydrolase HKJ31_08060 PF00528 Binding-protein-dependent transport system inner membrane component HKJ31_08065 PF00528 Binding-protein-dependent transport system inner membrane component HKJ31_08085 PF02616 Segregation and condensation protein ScpA HKJ31_08090 PF04079 Segregation and condensation complex subunit ScpB HKJ31_08095 PF01479 S4 domain HKJ31_08095 PF00849 RNA pseudouridylate synthase HKJ31_08105 PF00795 Carbon-nitrogen hydrolase HKJ31_08110 PF00155 Aminotransferase class I and II HKJ31_08115 PF00005 ABC transporter HKJ31_08120 PF03379 CcmB protein HKJ31_08125 PF01578 Cytochrome C assembly protein HKJ31_08135 PF03100 CcmE HKJ31_08140 PF01578 Cytochrome C assembly protein HKJ31_08140 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HKJ31_08145 PF08534 Redoxin HKJ31_08150 PF03918 Cytochrome C biogenesis protein HKJ31_08165 PF00561 alpha/beta hydrolase fold HKJ31_08175 PF00295 Glycosyl hydrolases family 28 HKJ31_08190 PF13419 Haloacid dehalogenase-like hydrolase HKJ31_08200 PF01979 Amidohydrolase family HKJ31_08205 PF09285 Elongation factor P, C-terminal HKJ31_08205 PF08207 Elongation factor P (EF-P) KOW-like domain HKJ31_08205 PF01132 Elongation factor P (EF-P) OB domain HKJ31_08210 PF04055 Radical SAM superfamily HKJ31_08215 PF00588 SpoU rRNA Methylase family HKJ31_08220 PF00459 Inositol monophosphatase family HKJ31_08245 PF09115 DNA polymerase III, delta subunit, C terminal HKJ31_08250 PF02618 YceG-like family HKJ31_08255 PF04715 Anthranilate synthase component I, N terminal region HKJ31_08255 PF00425 chorismate binding enzyme HKJ31_08260 PF00109 Beta-ketoacyl synthase, N-terminal domain HKJ31_08260 PF02801 Beta-ketoacyl synthase, C-terminal domain HKJ31_08265 PF00550 Phosphopantetheine attachment site HKJ31_08275 PF00698 Acyl transferase domain HKJ31_08280 PF17831 Pyruvate dehydrogenase E1 component middle domain HKJ31_08280 PF00456 Transketolase, thiamine diphosphate binding domain HKJ31_08285 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKJ31_08285 PF06594 Haemolysin-type calcium binding protein related domain HKJ31_08300 PF00348 Polyprenyl synthetase HKJ31_08305 PF02609 Exonuclease VII small subunit HKJ31_08310 PF01171 PP-loop family HKJ31_08310 PF09179 TilS substrate binding domain HKJ31_08310 PF11734 TilS substrate C-terminal domain HKJ31_08320 PF00245 Alkaline phosphatase HKJ31_08325 PF00375 Sodium:dicarboxylate symporter family HKJ31_08335 PF00877 NlpC/P60 family HKJ31_08340 PF00877 NlpC/P60 family HKJ31_08345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKJ31_08350 PF04235 Protein of unknown function (DUF418) HKJ31_08365 PF00730 HhH-GPD superfamily base excision DNA repair protein HKJ31_08365 PF10576 Iron-sulfur binding domain of endonuclease III HKJ31_08365 PF00633 Helix-hairpin-helix motif HKJ31_08375 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HKJ31_08375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKJ31_08390 PF01555 DNA methylase HKJ31_08480 PF01488 Shikimate / quinate 5-dehydrogenase HKJ31_08480 PF08501 Shikimate dehydrogenase substrate binding domain HKJ31_08480 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HKJ31_08490 PF02581 Thiamine monophosphate synthase HKJ31_08490 PF08543 Phosphomethylpyrimidine kinase HKJ31_08495 PF11412 Disulphide bond corrector protein DsbC HKJ31_08495 PF02683 Cytochrome C biogenesis protein transmembrane region HKJ31_08500 PF03091 CutA1 divalent ion tolerance protein HKJ31_08505 PF00166 Chaperonin 10 Kd subunit HKJ31_08510 PF00118 TCP-1/cpn60 chaperonin family HKJ31_08535 PF01370 NAD dependent epimerase/dehydratase family HKJ31_08540 PF01370 NAD dependent epimerase/dehydratase family HKJ31_08545 PF16363 GDP-mannose 4,6 dehydratase HKJ31_08560 PF00291 Pyridoxal-phosphate dependent enzyme HKJ31_08580 PF07715 TonB-dependent Receptor Plug Domain HKJ31_08580 PF00593 TonB dependent receptor HKJ31_08585 PF18331 PKHD-type hydroxylase C-terminal domain HKJ31_08585 PF13640 2OG-Fe(II) oxygenase superfamily HKJ31_08605 PF02424 ApbE family HKJ31_08615 PF01636 Phosphotransferase enzyme family HKJ31_08620 PF00483 Nucleotidyl transferase HKJ31_08625 PF00308 Bacterial dnaA protein HKJ31_08630 PF01594 AI-2E family transporter HKJ31_08640 PF00586 AIR synthase related protein, N-terminal domain HKJ31_08640 PF02769 AIR synthase related protein, C-terminal domain HKJ31_08645 PF00551 Formyl transferase HKJ31_08660 PF02223 Thymidylate kinase HKJ31_08670 PF05649 Peptidase family M13 HKJ31_08670 PF01431 Peptidase family M13 HKJ31_08680 PF07977 FabA-like domain HKJ31_08685 PF01171 PP-loop family HKJ31_08690 PF04381 Putative exonuclease, RdgC HKJ31_08700 PF00762 Ferrochelatase HKJ31_08710 PF02416 mttA/Hcf106 family HKJ31_08715 PF02416 mttA/Hcf106 family HKJ31_08720 PF00902 Sec-independent protein translocase protein (TatC) HKJ31_08730 PF00958 GMP synthase C terminal domain HKJ31_08730 PF00117 Glutamine amidotransferase class-I HKJ31_08745 PF00127 Copper binding proteins, plastocyanin/azurin family HKJ31_08750 PF03193 RsgA GTPase HKJ31_08755 PF02021 Uncharacterised protein family UPF0102 HKJ31_08760 PF04348 LppC putative lipoprotein HKJ31_08765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKJ31_08770 PF00593 TonB dependent receptor HKJ31_08770 PF07715 TonB-dependent Receptor Plug Domain HKJ31_08775 PF01588 Putative tRNA binding domain HKJ31_08775 PF09334 tRNA synthetases class I (M) HKJ31_08780 PF04060 Putative Fe-S cluster HKJ31_08835 PF02086 D12 class N6 adenine-specific DNA methyltransferase HKJ31_08860 PF00114 Pilin (bacterial filament) HKJ31_08860 PF07963 Prokaryotic N-terminal methylation motif HKJ31_08865 PF05567 Neisseria PilC beta-propeller domain HKJ31_08885 PF00114 Pilin (bacterial filament) HKJ31_08885 PF07963 Prokaryotic N-terminal methylation motif HKJ31_08890 PF11892 Domain of unknown function (DUF3412) HKJ31_08890 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HKJ31_08890 PF03641 Possible lysine decarboxylase HKJ31_08895 PF00563 EAL domain HKJ31_08895 PF12792 CSS motif domain associated with EAL HKJ31_08900 PF00899 ThiF family HKJ31_08905 PF01926 50S ribosome-binding GTPase HKJ31_08905 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HKJ31_08910 PF13360 PQQ-like domain HKJ31_08910 PF01011 PQQ enzyme repeat HKJ31_08930 PF04055 Radical SAM superfamily HKJ31_08935 PF00334 Nucleoside diphosphate kinase HKJ31_08940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HKJ31_08940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HKJ31_08945 PF00709 Adenylosuccinate synthetase HKJ31_08955 PF01145 SPFH domain / Band 7 family HKJ31_08960 PF12221 Bacterial membrane protein N terminal HKJ31_08960 PF01145 SPFH domain / Band 7 family HKJ31_08965 PF00107 Zinc-binding dehydrogenase HKJ31_08965 PF08240 Alcohol dehydrogenase GroES-like domain HKJ31_08970 PF00072 Response regulator receiver domain HKJ31_08985 PF04073 Aminoacyl-tRNA editing domain HKJ31_08985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKJ31_08985 PF03129 Anticodon binding domain HKJ31_08995 PF01066 CDP-alcohol phosphatidyltransferase HKJ31_09010 PF01915 Glycosyl hydrolase family 3 C-terminal domain HKJ31_09010 PF00933 Glycosyl hydrolase family 3 N terminal domain HKJ31_09010 PF14310 Fibronectin type III-like domain HKJ31_09015 PF00924 Mechanosensitive ion channel HKJ31_09020 PF02152 Dihydroneopterin aldolase HKJ31_09025 PF00814 Glycoprotease family HKJ31_09030 PF01165 Ribosomal protein S21 HKJ31_09035 PF09424 Yqey-like protein HKJ31_09040 PF03631 Virulence factor BrkB HKJ31_09045 PF08278 DNA primase DnaG DnaB-binding HKJ31_09045 PF10410 DnaB-helicase binding domain of primase HKJ31_09045 PF01807 CHC2 zinc finger HKJ31_09045 PF08275 DNA primase catalytic core, N-terminal domain HKJ31_09055 PF01555 DNA methylase HKJ31_09060 PF00579 tRNA synthetases class I (W and Y) HKJ31_09070 PF13538 UvrD-like helicase C-terminal domain HKJ31_09080 PF13361 UvrD-like helicase C-terminal domain HKJ31_09080 PF00580 UvrD/REP helicase N-terminal domain HKJ31_09080 PF12705 PD-(D/E)XK nuclease superfamily HKJ31_09085 PF17946 RecC C-terminal domain HKJ31_09090 PF00005 ABC transporter HKJ31_09095 PF02405 Permease MlaE HKJ31_09105 PF05494 MlaC protein HKJ31_09115 PF04333 MlaA lipoprotein HKJ31_09125 PF02646 RmuC family HKJ31_09130 PF00005 ABC transporter HKJ31_09140 PF13520 Amino acid permease HKJ31_09145 PF10672 S-adenosylmethionine-dependent methyltransferase HKJ31_09145 PF17785 PUA-like domain HKJ31_09150 PF03741 Integral membrane protein TerC family HKJ31_09155 PF01521 Iron-sulphur cluster biosynthesis HKJ31_09175 PF00486 Transcriptional regulatory protein, C terminal HKJ31_09175 PF00072 Response regulator receiver domain HKJ31_09190 PF00210 Ferritin-like domain HKJ31_09200 PF00293 NUDIX domain HKJ31_09215 PF00438 S-adenosylmethionine synthetase, N-terminal domain HKJ31_09215 PF02773 S-adenosylmethionine synthetase, C-terminal domain HKJ31_09215 PF02772 S-adenosylmethionine synthetase, central domain HKJ31_09220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_09220 PF08918 PhoQ Sensor HKJ31_09225 PF00486 Transcriptional regulatory protein, C terminal HKJ31_09225 PF00072 Response regulator receiver domain HKJ31_09235 PF01207 Dihydrouridine synthase (Dus) HKJ31_09245 PF00593 TonB dependent receptor HKJ31_09245 PF07715 TonB-dependent Receptor Plug Domain HKJ31_09260 PF10431 C-terminal, D2-small domain, of ClpB protein HKJ31_09260 PF07724 AAA domain (Cdc48 subfamily) HKJ31_09260 PF00004 ATPase family associated with various cellular activities (AAA) HKJ31_09260 PF02861 Clp amino terminal domain, pathogenicity island component HKJ31_09260 PF17871 AAA lid domain HKJ31_09265 PF00301 Rubredoxin HKJ31_09270 PF02581 Thiamine monophosphate synthase HKJ31_09275 PF00067 Cytochrome P450 HKJ31_09280 PF00884 Sulfatase HKJ31_09280 PF08019 Phosphoethanolamine transferase EptA/EptB HKJ31_09315 PF17092 Penicillin-binding protein OB-like domain HKJ31_09315 PF00912 Transglycosylase HKJ31_09315 PF00905 Penicillin binding protein transpeptidase domain HKJ31_09320 PF00248 Aldo/keto reductase family HKJ31_09325 PF00294 pfkB family carbohydrate kinase HKJ31_09330 PF05736 OprF membrane domain HKJ31_09330 PF00691 OmpA family HKJ31_09335 PF03796 DnaB-like helicase C terminal domain HKJ31_09335 PF00772 DnaB-like helicase N terminal domain HKJ31_09345 PF00067 Cytochrome P450 HKJ31_09355 PF00270 DEAD/DEAH box helicase HKJ31_09355 PF17191 RecG wedge domain HKJ31_09355 PF00271 Helicase conserved C-terminal domain HKJ31_09360 PF01042 Endoribonuclease L-PSP HKJ31_09365 PF02824 TGS domain HKJ31_09365 PF04607 Region found in RelA / SpoT proteins HKJ31_09365 PF13291 ACT domain HKJ31_09370 PF02913 FAD linked oxidases, C-terminal domain HKJ31_09370 PF01565 FAD binding domain HKJ31_09375 PF00691 OmpA family HKJ31_09375 PF05736 OprF membrane domain HKJ31_09380 PF02600 Disulfide bond formation protein DsbB HKJ31_09385 PF00593 TonB dependent receptor HKJ31_09385 PF07715 TonB-dependent Receptor Plug Domain HKJ31_09390 PF02590 Predicted SPOUT methyltransferase HKJ31_09440 PF12344 Ultra-violet resistance protein B HKJ31_09440 PF17757 UvrB interaction domain HKJ31_09440 PF04851 Type III restriction enzyme, res subunit HKJ31_09440 PF00271 Helicase conserved C-terminal domain HKJ31_09440 PF02151 UvrB/uvrC motif HKJ31_09455 PF00701 Dihydrodipicolinate synthetase family HKJ31_09465 PF00578 AhpC/TSA family HKJ31_09485 PF02769 AIR synthase related protein, C-terminal domain HKJ31_09485 PF00586 AIR synthase related protein, N-terminal domain HKJ31_09490 PF01029 NusB family HKJ31_09495 PF00885 6,7-dimethyl-8-ribityllumazine synthase HKJ31_09500 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HKJ31_09500 PF00925 GTP cyclohydrolase II HKJ31_09505 PF00677 Lumazine binding domain HKJ31_09515 PF01872 RibD C-terminal domain HKJ31_09515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HKJ31_09520 PF03477 ATP cone domain HKJ31_09530 PF00464 Serine hydroxymethyltransferase HKJ31_09535 PF12848 ABC transporter HKJ31_09535 PF00005 ABC transporter HKJ31_09540 PF06039 Malate:quinone oxidoreductase (Mqo) HKJ31_09545 PF04134 Protein of unknown function, DUF393 HKJ31_09560 PF00849 RNA pseudouridylate synthase HKJ31_09560 PF01479 S4 domain HKJ31_09565 PF13525 Outer membrane lipoprotein HKJ31_09575 PF07664 Ferrous iron transport protein B C terminus HKJ31_09575 PF02421 Ferrous iron transport protein B HKJ31_09575 PF07670 Nucleoside recognition HKJ31_09585 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HKJ31_09590 PF01029 NusB family HKJ31_09590 PF01189 16S rRNA methyltransferase RsmB/F HKJ31_09595 PF00551 Formyl transferase HKJ31_09595 PF02911 Formyl transferase, C-terminal domain HKJ31_09600 PF01327 Polypeptide deformylase HKJ31_09610 PF02481 DNA recombination-mediator protein A HKJ31_09610 PF17782 DprA winged helix domain HKJ31_09615 PF04361 Protein of unknown function (DUF494) HKJ31_09620 PF01751 Toprim domain HKJ31_09620 PF13368 Topoisomerase C-terminal repeat HKJ31_09620 PF01131 DNA topoisomerase HKJ31_09625 PF01300 Telomere recombination HKJ31_09655 PF04386 Stringent starvation protein B HKJ31_09660 PF02798 Glutathione S-transferase, N-terminal domain HKJ31_09660 PF00043 Glutathione S-transferase, C-terminal domain HKJ31_09665 PF02167 Cytochrome C1 family HKJ31_09670 PF00033 Cytochrome b/b6/petB HKJ31_09670 PF00032 Cytochrome b(C-terminal)/b6/petD HKJ31_09675 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HKJ31_09675 PF00355 Rieske [2Fe-2S] domain HKJ31_09680 PF01464 Transglycosylase SLT domain HKJ31_09685 PF00919 Uncharacterized protein family UPF0004 HKJ31_09685 PF04055 Radical SAM superfamily HKJ31_09685 PF01938 TRAM domain HKJ31_09690 PF02562 PhoH-like protein HKJ31_09695 PF02130 Uncharacterized protein family UPF0054 HKJ31_09705 PF03471 Transporter associated domain HKJ31_09705 PF00571 CBS domain HKJ31_09715 PF01544 CorA-like Mg2+ transporter protein HKJ31_09760 PF00912 Transglycosylase HKJ31_09760 PF00905 Penicillin binding protein transpeptidase domain HKJ31_09760 PF14814 Bifunctional transglycosylase second domain HKJ31_09770 PF04851 Type III restriction enzyme, res subunit HKJ31_09770 PF13307 Helicase C-terminal domain HKJ31_09780 PF00484 Carbonic anhydrase HKJ31_09790 PF01522 Polysaccharide deacetylase HKJ31_09800 PF09383 NIL domain HKJ31_09800 PF00005 ABC transporter HKJ31_09805 PF00528 Binding-protein-dependent transport system inner membrane component HKJ31_09810 PF03180 NLPA lipoprotein HKJ31_09825 PF00364 Biotin-requiring enzyme HKJ31_09825 PF02817 e3 binding domain HKJ31_09825 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HKJ31_09830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKJ31_09830 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKJ31_09840 PF01545 Cation efflux family HKJ31_09845 PF01053 Cys/Met metabolism PLP-dependent enzyme HKJ31_09850 PF00561 alpha/beta hydrolase fold HKJ31_09855 PF01551 Peptidase family M23 HKJ31_09870 PF01975 Survival protein SurE HKJ31_09880 PF09335 SNARE associated Golgi protein HKJ31_09885 PF01551 Peptidase family M23 HKJ31_09885 PF01476 LysM domain HKJ31_09895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_09895 PF00512 His Kinase A (phospho-acceptor) domain HKJ31_09895 PF00989 PAS fold HKJ31_09895 PF16736 Single Cache-like HKJ31_09900 PF01168 Alanine racemase, N-terminal domain HKJ31_09900 PF00842 Alanine racemase, C-terminal domain HKJ31_09905 PF01266 FAD dependent oxidoreductase HKJ31_09910 PF01641 SelR domain HKJ31_09915 PF00704 Glycosyl hydrolases family 18 HKJ31_09915 PF01476 LysM domain HKJ31_09920 PF07691 PA14 domain HKJ31_09920 PF00728 Glycosyl hydrolase family 20, catalytic domain HKJ31_09920 PF02838 Glycosyl hydrolase family 20, domain 2 HKJ31_09930 PF14310 Fibronectin type III-like domain HKJ31_09930 PF00933 Glycosyl hydrolase family 3 N terminal domain HKJ31_09930 PF01915 Glycosyl hydrolase family 3 C-terminal domain HKJ31_09930 PF07691 PA14 domain HKJ31_09945 PF07971 Glycosyl hydrolase family 92 HKJ31_09945 PF17678 Glycosyl hydrolase family 92 N-terminal domain HKJ31_09950 PF01301 Glycosyl hydrolases family 35 HKJ31_09955 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HKJ31_09960 PF00639 PPIC-type PPIASE domain HKJ31_09960 PF09312 SurA N-terminal domain HKJ31_09965 PF04453 LPS transport system D HKJ31_09965 PF03968 OstA-like protein HKJ31_09975 PF01494 FAD binding domain HKJ31_09980 PF01494 FAD binding domain HKJ31_09990 PF03466 LysR substrate binding domain HKJ31_09990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKJ31_09995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKJ31_09995 PF10414 Sirohaem synthase dimerisation region HKJ31_09995 PF14824 Sirohaem biosynthesis protein central HKJ31_10000 PF00291 Pyridoxal-phosphate dependent enzyme HKJ31_10025 PF00274 Fructose-bisphosphate aldolase class-I HKJ31_10030 PF00224 Pyruvate kinase, barrel domain HKJ31_10030 PF02887 Pyruvate kinase, alpha/beta domain HKJ31_10040 PF00162 Phosphoglycerate kinase HKJ31_10045 PF00749 tRNA synthetases class I (E and Q), catalytic domain HKJ31_10050 PF01475 Ferric uptake regulator family HKJ31_10060 PF00553 Cellulose binding domain HKJ31_10060 PF00150 Cellulase (glycosyl hydrolase family 5) HKJ31_10070 PF05193 Peptidase M16 inactive domain HKJ31_10070 PF00675 Insulinase (Peptidase family M16) HKJ31_10090 PF03330 Lytic transglycolase HKJ31_10095 PF02810 SEC-C motif HKJ31_10095 PF07517 SecA DEAD-like domain HKJ31_10095 PF07516 SecA Wing and Scaffold domain HKJ31_10095 PF01043 SecA preprotein cross-linking domain HKJ31_10100 PF01551 Peptidase family M23 HKJ31_10100 PF08525 Opacity-associated protein A N-terminal motif HKJ31_10100 PF01476 LysM domain HKJ31_10110 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HKJ31_10115 PF00091 Tubulin/FtsZ family, GTPase domain HKJ31_10115 PF12327 FtsZ family, C-terminal domain HKJ31_10120 PF02491 SHS2 domain inserted in FTSA HKJ31_10125 PF08478 POTRA domain, FtsQ-type HKJ31_10125 PF03799 Cell division protein FtsQ HKJ31_10130 PF07478 D-ala D-ala ligase C-terminus HKJ31_10130 PF01820 D-ala D-ala ligase N-terminus HKJ31_10135 PF02875 Mur ligase family, glutamate ligase domain HKJ31_10135 PF08245 Mur ligase middle domain HKJ31_10135 PF01225 Mur ligase family, catalytic domain HKJ31_10140 PF03033 Glycosyltransferase family 28 N-terminal domain HKJ31_10140 PF04101 Glycosyltransferase family 28 C-terminal domain HKJ31_10145 PF01098 Cell cycle protein HKJ31_10150 PF00953 Glycosyl transferase family 4 HKJ31_10155 PF01225 Mur ligase family, catalytic domain HKJ31_10155 PF02875 Mur ligase family, glutamate ligase domain HKJ31_10155 PF08245 Mur ligase middle domain HKJ31_10160 PF08245 Mur ligase middle domain HKJ31_10160 PF02875 Mur ligase family, glutamate ligase domain HKJ31_10160 PF01225 Mur ligase family, catalytic domain HKJ31_10165 PF03717 Penicillin-binding Protein dimerisation domain HKJ31_10165 PF00905 Penicillin binding protein transpeptidase domain HKJ31_10170 PF04999 Cell division protein FtsL HKJ31_10175 PF01795 MraW methylase family HKJ31_10180 PF02381 MraZ protein, putative antitoxin-like HKJ31_10190 PF02080 TrkA-C domain HKJ31_10190 PF03600 Citrate transporter HKJ31_10195 PF02390 Putative methyltransferase HKJ31_10200 PF05690 Thiazole biosynthesis protein ThiG HKJ31_10205 PF05690 Thiazole biosynthesis protein ThiG HKJ31_10205 PF02597 ThiS family HKJ31_10245 PF07977 FabA-like domain HKJ31_10280 PF04143 Sulphur transport HKJ31_10290 PF01925 Sulfite exporter TauE/SafE HKJ31_10295 PF00692 dUTPase HKJ31_10305 PF01119 DNA mismatch repair protein, C-terminal domain HKJ31_10305 PF08676 MutL C terminal dimerisation domain HKJ31_10310 PF01520 N-acetylmuramoyl-L-alanine amidase HKJ31_10310 PF11741 AMIN domain HKJ31_10315 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HKJ31_10320 PF03853 YjeF-related protein N-terminus HKJ31_10320 PF01256 Carbohydrate kinase HKJ31_10325 PF02601 Exonuclease VII, large subunit HKJ31_10325 PF13742 OB-fold nucleic acid binding domain HKJ31_10340 PF00570 HRDC domain HKJ31_10340 PF01612 3'-5' exonuclease HKJ31_10350 PF01728 FtsJ-like methyltransferase HKJ31_10350 PF18125 RlmM ferredoxin-like domain HKJ31_10370 PF00216 Bacterial DNA-binding protein HKJ31_10375 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HKJ31_10375 PF01588 Putative tRNA binding domain HKJ31_10375 PF03147 Ferredoxin-fold anticodon binding domain HKJ31_10375 PF03484 tRNA synthetase B5 domain HKJ31_10375 PF03483 B3/4 domain HKJ31_10380 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HKJ31_10380 PF01409 tRNA synthetases class II core domain (F) HKJ31_10385 PF00453 Ribosomal protein L20 HKJ31_10390 PF01632 Ribosomal protein L35 HKJ31_10395 PF00707 Translation initiation factor IF-3, C-terminal domain HKJ31_10395 PF05198 Translation initiation factor IF-3, N-terminal domain HKJ31_10400 PF03129 Anticodon binding domain HKJ31_10400 PF02824 TGS domain HKJ31_10400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKJ31_10400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HKJ31_10415 PF18030 RimK PreATP-grasp domain HKJ31_10415 PF08443 RimK-like ATP-grasp domain HKJ31_10420 PF00072 Response regulator receiver domain HKJ31_10420 PF00486 Transcriptional regulatory protein, C terminal HKJ31_10425 PF00512 His Kinase A (phospho-acceptor) domain HKJ31_10425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_10425 PF00672 HAMP domain HKJ31_10430 PF01121 Dephospho-CoA kinase HKJ31_10435 PF06750 Bacterial Peptidase A24 N-terminal domain HKJ31_10435 PF01478 Type IV leader peptidase family HKJ31_10440 PF00482 Type II secretion system (T2SS), protein F HKJ31_10445 PF07963 Prokaryotic N-terminal methylation motif HKJ31_10445 PF00114 Pilin (bacterial filament) HKJ31_10455 PF00114 Pilin (bacterial filament) HKJ31_10455 PF07963 Prokaryotic N-terminal methylation motif HKJ31_10460 PF00437 Type II/IV secretion system protein HKJ31_10460 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HKJ31_10465 PF02954 Bacterial regulatory protein, Fis family HKJ31_10465 PF00158 Sigma-54 interaction domain HKJ31_10465 PF00072 Response regulator receiver domain HKJ31_10470 PF00512 His Kinase A (phospho-acceptor) domain HKJ31_10470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_10475 PF08442 ATP-grasp domain HKJ31_10475 PF00549 CoA-ligase HKJ31_10480 PF00549 CoA-ligase HKJ31_10480 PF02629 CoA binding domain HKJ31_10490 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HKJ31_10490 PF17287 POTRA domain HKJ31_10490 PF08479 POTRA domain, ShlB-type HKJ31_10500 PF00521 DNA gyrase/topoisomerase IV, subunit A HKJ31_10500 PF03989 DNA gyrase C-terminal domain, beta-propeller HKJ31_10505 PF01008 Initiation factor 2 subunit family HKJ31_10515 PF00152 tRNA synthetases class II (D, K and N) HKJ31_10525 PF03120 NAD-dependent DNA ligase OB-fold domain HKJ31_10525 PF00533 BRCA1 C Terminus (BRCT) domain HKJ31_10525 PF01653 NAD-dependent DNA ligase adenylation domain HKJ31_10525 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HKJ31_10525 PF12826 Helix-hairpin-helix motif HKJ31_10530 PF04354 ZipA, C-terminal FtsZ-binding domain HKJ31_10535 PF02463 RecF/RecN/SMC N terminal domain HKJ31_10540 PF03948 Ribosomal protein L9, C-terminal domain HKJ31_10540 PF01281 Ribosomal protein L9, N-terminal domain HKJ31_10545 PF01084 Ribosomal protein S18 HKJ31_10550 PF01250 Ribosomal protein S6 HKJ31_10555 PF01521 Iron-sulphur cluster biosynthesis HKJ31_10560 PF01336 OB-fold nucleic acid binding domain HKJ31_10560 PF00152 tRNA synthetases class II (D, K and N) HKJ31_10565 PF01061 ABC-2 type transporter HKJ31_10570 PF00005 ABC transporter HKJ31_10580 PF01180 Dihydroorotate dehydrogenase HKJ31_10585 PF01565 FAD binding domain HKJ31_10585 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HKJ31_10590 PF00892 EamA-like transporter family HKJ31_10595 PF01569 PAP2 superfamily HKJ31_10600 PF04551 GcpE protein HKJ31_10610 PF00072 Response regulator receiver domain HKJ31_10615 PF00889 Elongation factor TS HKJ31_10620 PF00318 Ribosomal protein S2 HKJ31_10630 PF00005 ABC transporter HKJ31_10630 PF00664 ABC transporter transmembrane region HKJ31_10645 PF02321 Outer membrane efflux protein HKJ31_10650 PF00149 Calcineurin-like phosphoesterase HKJ31_10660 PF02541 Ppx/GppA phosphatase family HKJ31_10665 PF17941 Polyphosphate kinase C-terminal domain 1 HKJ31_10665 PF13089 Polyphosphate kinase N-terminal domain HKJ31_10665 PF13090 Polyphosphate kinase C-terminal domain 2 HKJ31_10665 PF02503 Polyphosphate kinase middle domain HKJ31_10670 PF00512 His Kinase A (phospho-acceptor) domain HKJ31_10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ31_10670 PF11808 Phosphate regulon sensor protein PhoR HKJ31_10670 PF00989 PAS fold HKJ31_10675 PF00486 Transcriptional regulatory protein, C terminal HKJ31_10675 PF00072 Response regulator receiver domain HKJ31_10680 PF13181 Tetratricopeptide repeat HKJ31_10680 PF01435 Peptidase family M48 HKJ31_10685 PF00462 Glutaredoxin HKJ31_10690 PF18324 Hypothetical protein TT1725 HKJ31_10690 PF00180 Isocitrate/isopropylmalate dehydrogenase HKJ31_10700 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HKJ31_10700 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HKJ31_10705 PF11893 Domain of unknown function (DUF3413) HKJ31_10705 PF00884 Sulfatase HKJ31_10710 PF00037 4Fe-4S binding domain HKJ31_10710 PF11953 Domain of unknown function (DUF3470) HKJ31_10720 PF01106 NifU-like domain HKJ31_10725 PF01329 Pterin 4 alpha carbinolamine dehydratase HKJ31_10735 PF01479 S4 domain HKJ31_10735 PF00849 RNA pseudouridylate synthase HKJ31_10740 PF00575 S1 RNA binding domain HKJ31_10740 PF12111 Polyribonucleotide phosphorylase C terminal HKJ31_10740 PF10150 Ribonuclease E/G family HKJ31_10745 PF00072 Response regulator receiver domain HKJ31_10745 PF00196 Bacterial regulatory proteins, luxR family HKJ31_10760 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HKJ31_10760 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HKJ31_10765 PF00545 ribonuclease HKJ31_10780 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HKJ31_10785 PF00313 'Cold-shock' DNA-binding domain HKJ31_10790 PF00563 EAL domain HKJ31_10790 PF01590 GAF domain HKJ31_10790 PF00990 Diguanylate cyclase, GGDEF domain HKJ31_10790 PF00360 Phytochrome region HKJ31_10795 PF01435 Peptidase family M48 HKJ31_10800 PF03144 Elongation factor Tu domain 2 HKJ31_10800 PF03143 Elongation factor Tu C-terminal domain HKJ31_10800 PF00009 Elongation factor Tu GTP binding domain HKJ31_10805 PF03764 Elongation factor G, domain IV HKJ31_10805 PF03144 Elongation factor Tu domain 2 HKJ31_10805 PF00679 Elongation factor G C-terminus HKJ31_10805 PF14492 Elongation Factor G, domain II HKJ31_10805 PF00009 Elongation factor Tu GTP binding domain HKJ31_10810 PF00177 Ribosomal protein S7p/S5e HKJ31_10815 PF00164 Ribosomal protein S12/S23 HKJ31_10820 PF04998 RNA polymerase Rpb1, domain 5 HKJ31_10820 PF05000 RNA polymerase Rpb1, domain 4 HKJ31_10820 PF04983 RNA polymerase Rpb1, domain 3 HKJ31_10820 PF04997 RNA polymerase Rpb1, domain 1 HKJ31_10820 PF00623 RNA polymerase Rpb1, domain 2 HKJ31_10825 PF10385 RNA polymerase beta subunit external 1 domain HKJ31_10825 PF00562 RNA polymerase Rpb2, domain 6 HKJ31_10825 PF04563 RNA polymerase beta subunit HKJ31_10825 PF04561 RNA polymerase Rpb2, domain 2 HKJ31_10825 PF04565 RNA polymerase Rpb2, domain 3 HKJ31_10825 PF04560 RNA polymerase Rpb2, domain 7 HKJ31_10830 PF16320 Ribosomal protein L7/L12 dimerisation domain HKJ31_10830 PF00542 Ribosomal protein L7/L12 C-terminal domain HKJ31_10835 PF00466 Ribosomal protein L10 HKJ31_10840 PF00687 Ribosomal protein L1p/L10e family HKJ31_10845 PF00298 Ribosomal protein L11, RNA binding domain HKJ31_10845 PF03946 Ribosomal protein L11, N-terminal domain HKJ31_10850 PF02357 Transcription termination factor nusG HKJ31_10850 PF00467 KOW motif HKJ31_10855 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HKJ31_10865 PF00009 Elongation factor Tu GTP binding domain HKJ31_10865 PF03143 Elongation factor Tu C-terminal domain HKJ31_10865 PF03144 Elongation factor Tu domain 2 HKJ31_10885 PF01926 50S ribosome-binding GTPase HKJ31_10885 PF06071 Protein of unknown function (DUF933) HKJ31_10890 PF01195 Peptidyl-tRNA hydrolase HKJ31_10895 PF01386 Ribosomal L25p family HKJ31_10895 PF14693 Ribosomal protein TL5, C-terminal domain HKJ31_10900 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HKJ31_10900 PF14572 Phosphoribosyl synthetase-associated domain HKJ31_10910 PF00288 GHMP kinases N terminal domain HKJ31_10910 PF08544 GHMP kinases C terminal HKJ31_10915 PF03550 Outer membrane lipoprotein LolB HKJ31_10925 PF01488 Shikimate / quinate 5-dehydrogenase HKJ31_10925 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HKJ31_10925 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HKJ31_10930 PF00472 RF-1 domain HKJ31_10930 PF03462 PCRF domain HKJ31_10940 PF01170 Putative RNA methylase family UPF0020 HKJ31_10940 PF02926 THUMP domain HKJ31_10940 PF10672 S-adenosylmethionine-dependent methyltransferase HKJ31_10975 PF01914 MarC family integral membrane protein HKJ31_10980 PF00462 Glutaredoxin HKJ31_10985 PF02222 ATP-grasp domain HKJ31_10985 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HKJ31_10990 PF00731 AIR carboxylase HKJ31_11010 PF07731 Multicopper oxidase HKJ31_11010 PF07732 Multicopper oxidase HKJ31_11020 PF13361 UvrD-like helicase C-terminal domain HKJ31_11020 PF00580 UvrD/REP helicase N-terminal domain HKJ31_11025 PF04349 Periplasmic glucan biosynthesis protein, MdoG HKJ31_11030 PF01343 Peptidase family S49 HKJ31_11035 PF01554 MatE HKJ31_11050 PF18074 Primosomal protein N C-terminal domain HKJ31_11050 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HKJ31_11050 PF00271 Helicase conserved C-terminal domain HKJ31_11050 PF17764 3′ DNA-binding domain (3′BD) HKJ31_11050 PF00270 DEAD/DEAH box helicase HKJ31_11055 PF04542 Sigma-70 region 2 HKJ31_11055 PF04545 Sigma-70, region 4 HKJ31_11060 PF03167 Uracil DNA glycosylase superfamily HKJ31_11065 PF01339 CheB methylesterase HKJ31_11065 PF00072 Response regulator receiver domain HKJ31_11070 PF18075 FtsX extracellular domain HKJ31_11075 PF00005 ABC transporter HKJ31_11080 PF00270 DEAD/DEAH box helicase HKJ31_11080 PF12300 ATP-dependent RNA helicase RhlB HKJ31_11080 PF00271 Helicase conserved C-terminal domain HKJ31_11085 PF00085 Thioredoxin HKJ31_11090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKJ31_11090 PF07497 Rho termination factor, RNA-binding domain HKJ31_11090 PF07498 Rho termination factor, N-terminal domain HKJ31_11095 PF03971 Monomeric isocitrate dehydrogenase HKJ31_11105 PF03572 Peptidase family S41 HKJ31_11105 PF13180 PDZ domain HKJ31_11110 PF01551 Peptidase family M23 HKJ31_11125 PF00150 Cellulase (glycosyl hydrolase family 5) HKJ31_11130 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKJ31_11130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HKJ31_11135 PF01493 GXGXG motif HKJ31_11135 PF00310 Glutamine amidotransferases class-II HKJ31_11135 PF04898 Glutamate synthase central domain HKJ31_11135 PF01645 Conserved region in glutamate synthase HKJ31_11140 PF03807 NADP oxidoreductase coenzyme F420-dependent HKJ31_11140 PF14748 Pyrroline-5-carboxylate reductase dimerisation HKJ31_11185 PF18766 SWI2/SNF2 ATPase HKJ31_11185 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HKJ31_11185 PF11867 Domain of unknown function (DUF3387) HKJ31_11195 PF12161 HsdM N-terminal domain HKJ31_11195 PF02384 N-6 DNA Methylase HKJ31_11205 PF18766 SWI2/SNF2 ATPase HKJ31_11205 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HKJ31_11205 PF12008 Type I restriction and modification enzyme - subunit R C terminal HKJ31_11210 PF01420 Type I restriction modification DNA specificity domain HKJ31_11220 PF02384 N-6 DNA Methylase HKJ31_11220 PF12161 HsdM N-terminal domain HKJ31_11225 PF01810 LysE type translocator HKJ31_11240 PF11855 Protein of unknown function (DUF3375) HKJ31_11290 PF02384 N-6 DNA Methylase HKJ31_11360 PF06594 Haemolysin-type calcium binding protein related domain HKJ31_11360 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKJ31_11405 PF01850 PIN domain HKJ31_11480 PF10396 GTP-binding protein TrmE N-terminus HKJ31_11480 PF01926 50S ribosome-binding GTPase HKJ31_11480 PF12631 MnmE helical domain HKJ31_11490 PF14849 YidC periplasmic domain HKJ31_11490 PF02096 60Kd inner membrane protein HKJ31_11495 PF00825 Ribonuclease P HKJ31_11500 PF00468 Ribosomal protein L34