locus-tag class description DVT08_000005 PF08299 Bacterial dnaA protein helix-turn-helix DVT08_000005 PF11638 DnaA N-terminal domain DVT08_000005 PF00308 Bacterial dnaA protein DVT08_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain DVT08_000010 PF02767 DNA polymerase III beta subunit, central domain DVT08_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain DVT08_000015 PF02463 RecF/RecN/SMC N terminal domain DVT08_000020 PF18053 DNA gyrase B subunit insert domain DVT08_000020 PF00986 DNA gyrase B subunit, carboxyl terminus DVT08_000020 PF00204 DNA gyrase B DVT08_000020 PF01751 Toprim domain DVT08_000020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_000030 PF01435 Peptidase family M48 DVT08_000040 PF03544 Gram-negative bacterial TonB protein C-terminal DVT08_000045 PF01618 MotA/TolQ/ExbB proton channel family DVT08_000050 PF02472 Biopolymer transport protein ExbD/TolR DVT08_000055 PF02472 Biopolymer transport protein ExbD/TolR DVT08_000070 PF01218 Coproporphyrinogen III oxidase DVT08_000090 PF00793 DAHP synthetase I family DVT08_000125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DVT08_000130 PF00155 Aminotransferase class I and II DVT08_000135 PF01741 Large-conductance mechanosensitive channel, MscL DVT08_000155 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DVT08_000165 PF17757 UvrB interaction domain DVT08_000165 PF02559 CarD-like/TRCF domain DVT08_000165 PF00270 DEAD/DEAH box helicase DVT08_000165 PF00271 Helicase conserved C-terminal domain DVT08_000165 PF03461 TRCF domain DVT08_000170 PF01220 Dehydroquinase class II DVT08_000175 PF00364 Biotin-requiring enzyme DVT08_000180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DVT08_000180 PF02785 Biotin carboxylase C-terminal domain DVT08_000180 PF00289 Biotin carboxylase, N-terminal domain DVT08_000185 PF13361 UvrD-like helicase C-terminal domain DVT08_000185 PF00580 UvrD/REP helicase N-terminal domain DVT08_000190 PF00175 Oxidoreductase NAD-binding domain DVT08_000190 PF00970 Oxidoreductase FAD-binding domain DVT08_000190 PF00042 Globin DVT08_000200 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DVT08_000205 PF08535 KorB domain DVT08_000205 PF06613 KorB C-terminal beta-barrel domain DVT08_000205 PF02195 ParB-like nuclease domain DVT08_000210 PF00156 Phosphoribosyl transferase domain DVT08_000215 PF04055 Radical SAM superfamily DVT08_000215 PF06968 Biotin and Thiamin Synthesis associated domain DVT08_000220 PF01734 Patatin-like phospholipase DVT08_000225 PF01040 UbiA prenyltransferase family DVT08_000260 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DVT08_000260 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DVT08_000265 PF01578 Cytochrome C assembly protein DVT08_000270 PF02881 SRP54-type protein, helical bundle domain DVT08_000270 PF00448 SRP54-type protein, GTPase domain DVT08_000270 PF02978 Signal peptide binding domain DVT08_000285 PF00419 Fimbrial protein DVT08_000290 PF13954 PapC N-terminal domain DVT08_000290 PF00577 Outer membrane usher protein DVT08_000290 PF13953 PapC C-terminal domain DVT08_000295 PF02753 Pili assembly chaperone PapD, C-terminal domain DVT08_000295 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DVT08_000300 PF16970 Type-1 fimbrial protein, A DVT08_000305 PF02464 Competence-damaged protein DVT08_000310 PF00083 Sugar (and other) transporter DVT08_000315 PF01926 50S ribosome-binding GTPase DVT08_000315 PF13167 GTP-binding GTPase N-terminal DVT08_000315 PF16360 GTP-binding GTPase Middle Region DVT08_000320 PF17209 Hfq protein DVT08_000330 PF00809 Pterin binding enzyme DVT08_000340 PF17862 AAA+ lid domain DVT08_000340 PF06480 FtsH Extracellular DVT08_000340 PF01434 Peptidase family M41 DVT08_000340 PF00004 ATPase family associated with various cellular activities (AAA) DVT08_000345 PF01728 FtsJ-like methyltransferase DVT08_000350 PF01985 CRS1 / YhbY (CRM) domain DVT08_000360 PF00920 Dehydratase family DVT08_000380 PF03279 Bacterial lipid A biosynthesis acyltransferase DVT08_000385 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DVT08_000395 PF00886 Ribosomal protein S16 DVT08_000400 PF01782 RimM N-terminal domain DVT08_000400 PF05239 PRC-barrel domain DVT08_000405 PF01746 tRNA (Guanine-1)-methyltransferase DVT08_000410 PF01245 Ribosomal protein L19 DVT08_000415 PF00557 Metallopeptidase family M24 DVT08_000420 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DVT08_000420 PF00132 Bacterial transferase hexapeptide (six repeats) DVT08_000420 PF14602 Hexapeptide repeat of succinyl-transferase DVT08_000425 PF03960 ArsC family DVT08_000430 PF01546 Peptidase family M20/M25/M40 DVT08_000430 PF07687 Peptidase dimerisation domain DVT08_000435 PF13537 Glutamine amidotransferase domain DVT08_000435 PF00733 Asparagine synthase DVT08_000445 PF03060 Nitronate monooxygenase DVT08_000450 PF01726 LexA DNA binding domain DVT08_000450 PF00717 Peptidase S24-like DVT08_000455 PF00154 recA bacterial DNA recombination protein DVT08_000460 PF02272 DHHA1 domain DVT08_000460 PF01411 tRNA synthetases class II (A) DVT08_000460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DVT08_000465 PF02599 Global regulator protein family DVT08_000475 PF01432 Peptidase family M3 DVT08_000495 PF00394 Multicopper oxidase DVT08_000495 PF07732 Multicopper oxidase DVT08_000495 PF07731 Multicopper oxidase DVT08_000500 PF05275 Copper resistance protein B precursor (CopB) DVT08_000505 PF08264 Anticodon-binding domain of tRNA DVT08_000505 PF00133 tRNA synthetases class I (I, L, M and V) DVT08_000505 PF10458 Valyl tRNA synthetase tRNA binding arm DVT08_000525 PF02789 Cytosol aminopeptidase family, N-terminal domain DVT08_000525 PF00883 Cytosol aminopeptidase family, catalytic domain DVT08_000545 PF01380 SIS domain DVT08_000555 PF17284 Spermidine synthase tetramerisation domain DVT08_000560 PF17944 Arginine decarboxylase C-terminal helical extension DVT08_000560 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DVT08_000560 PF17810 Arginine decarboxylase helical bundle domain DVT08_000565 PF00106 short chain dehydrogenase DVT08_000575 PF00750 tRNA synthetases class I (R) DVT08_000575 PF05746 DALR anticodon binding domain DVT08_000575 PF03485 Arginyl tRNA synthetase N terminal domain DVT08_000580 PF04002 RadC-like JAB domain DVT08_000585 PF02441 Flavoprotein DVT08_000585 PF04127 DNA / pantothenate metabolism flavoprotein DVT08_000590 PF00692 dUTPase DVT08_000595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DVT08_000595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DVT08_000595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DVT08_000595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DVT08_000605 PF00156 Phosphoribosyl transferase domain DVT08_000640 PF07690 Major Facilitator Superfamily DVT08_000645 PF03702 Anhydro-N-acetylmuramic acid kinase DVT08_000650 PF01551 Peptidase family M23 DVT08_000650 PF04225 Opacity-associated protein A LysM-like domain DVT08_000655 PF00579 tRNA synthetases class I (W and Y) DVT08_000685 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DVT08_000685 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DVT08_000690 PF01578 Cytochrome C assembly protein DVT08_000705 PF16658 Class II release factor RF3, C-terminal domain DVT08_000705 PF00009 Elongation factor Tu GTP binding domain DVT08_000710 PF03006 Haemolysin-III related DVT08_000715 PF00535 Glycosyl transferase family 2 DVT08_000720 PF01026 TatD related DNase DVT08_000735 PF01597 Glycine cleavage H-protein DVT08_000740 PF08669 Glycine cleavage T-protein C-terminal barrel domain DVT08_000740 PF01571 Aminomethyltransferase folate-binding domain DVT08_000750 PF01145 SPFH domain / Band 7 family DVT08_000750 PF16200 C-terminal region of band_7 DVT08_000755 PF03819 MazG nucleotide pyrophosphohydrolase domain DVT08_000760 PF00459 Inositol monophosphatase family DVT08_000765 PF00293 NUDIX domain DVT08_000770 PF00202 Aminotransferase class-III DVT08_000775 PF04452 RNA methyltransferase DVT08_000780 PF00271 Helicase conserved C-terminal domain DVT08_000780 PF00270 DEAD/DEAH box helicase DVT08_000785 PF01242 6-pyruvoyl tetrahydropterin synthase DVT08_000810 PF03653 Uncharacterised protein family (UPF0093) DVT08_000815 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DVT08_000820 PF01336 OB-fold nucleic acid binding domain DVT08_000820 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DVT08_000820 PF02811 PHP domain DVT08_000820 PF14579 Helix-hairpin-helix motif DVT08_000820 PF07733 Bacterial DNA polymerase III alpha NTPase domain DVT08_000825 PF01259 SAICAR synthetase DVT08_000830 PF00226 DnaJ domain DVT08_000830 PF00684 DnaJ central domain DVT08_000830 PF01556 DnaJ C terminal domain DVT08_000835 PF00834 Ribulose-phosphate 3 epimerase family DVT08_000845 PF00425 chorismate binding enzyme DVT08_000845 PF04715 Anthranilate synthase component I, N terminal region DVT08_000850 PF00117 Glutamine amidotransferase class-I DVT08_000855 PF02885 Glycosyl transferase family, helical bundle domain DVT08_000855 PF00591 Glycosyl transferase family, a/b domain DVT08_000860 PF00218 Indole-3-glycerol phosphate synthase DVT08_000880 PF01321 Creatinase/Prolidase N-terminal domain DVT08_000880 PF00557 Metallopeptidase family M24 DVT08_000900 PF02699 Preprotein translocase subunit DVT08_000905 PF02355 Protein export membrane protein DVT08_000905 PF13721 SecD export protein N-terminal TM region DVT08_000905 PF07549 SecD/SecF GG Motif DVT08_000910 PF02355 Protein export membrane protein DVT08_000910 PF07549 SecD/SecF GG Motif DVT08_000920 PF12627 Probable RNA and SrmB- binding site of polymerase A DVT08_000920 PF12626 Polymerase A arginine-rich C-terminus DVT08_000920 PF01743 Poly A polymerase head domain DVT08_000925 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DVT08_000930 PF02548 Ketopantoate hydroxymethyltransferase DVT08_000935 PF02569 Pantoate-beta-alanine ligase DVT08_000940 PF02261 Aspartate decarboxylase DVT08_000945 PF00342 Phosphoglucose isomerase DVT08_000955 PF02576 RimP N-terminal domain DVT08_000955 PF17384 RimP C-terminal SH3 domain DVT08_000960 PF13184 NusA-like KH domain DVT08_000960 PF08529 NusA N-terminal domain DVT08_000960 PF00575 S1 RNA binding domain DVT08_000965 PF04760 Translation initiation factor IF-2, N-terminal region DVT08_000965 PF00009 Elongation factor Tu GTP binding domain DVT08_000965 PF08364 Bacterial translation initiation factor IF-2 associated region DVT08_000965 PF11987 Translation-initiation factor 2 DVT08_000970 PF02033 Ribosome-binding factor A DVT08_000975 PF09157 Pseudouridine synthase II TruB, C-terminal DVT08_000975 PF01509 TruB family pseudouridylate synthase (N terminal domain) DVT08_000975 PF16198 tRNA pseudouridylate synthase B C-terminal domain DVT08_000980 PF00312 Ribosomal protein S15 DVT08_000985 PF00575 S1 RNA binding domain DVT08_000985 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DVT08_000985 PF01138 3' exoribonuclease family, domain 1 DVT08_000985 PF03725 3' exoribonuclease family, domain 2 DVT08_000985 PF00013 KH domain DVT08_000990 PF01638 HxlR-like helix-turn-helix DVT08_000995 PF05368 NmrA-like family DVT08_001030 PF00270 DEAD/DEAH box helicase DVT08_001030 PF03880 DbpA RNA binding domain DVT08_001030 PF00271 Helicase conserved C-terminal domain DVT08_001040 PF01012 Electron transfer flavoprotein domain DVT08_001040 PF00766 Electron transfer flavoprotein FAD-binding domain DVT08_001045 PF01012 Electron transfer flavoprotein domain DVT08_001050 PF16363 GDP-mannose 4,6 dehydratase DVT08_001055 PF00483 Nucleotidyl transferase DVT08_001060 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DVT08_001065 PF04321 RmlD substrate binding domain DVT08_001070 PF01050 Mannose-6-phosphate isomerase DVT08_001070 PF00483 Nucleotidyl transferase DVT08_001075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DVT08_001075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DVT08_001075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DVT08_001075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DVT08_001100 PF03797 Autotransporter beta-domain DVT08_001100 PF12951 Passenger-associated-transport-repeat DVT08_001100 PF00082 Subtilase family DVT08_001105 PF06779 Uncharacterised MFS-type transporter YbfB DVT08_001115 PF00365 Phosphofructokinase DVT08_001125 PF08245 Mur ligase middle domain DVT08_001125 PF01225 Mur ligase family, catalytic domain DVT08_001125 PF02875 Mur ligase family, glutamate ligase domain DVT08_001130 PF01569 PAP2 superfamily DVT08_001140 PF00883 Cytosol aminopeptidase family, catalytic domain DVT08_001140 PF02789 Cytosol aminopeptidase family, N-terminal domain DVT08_001145 PF01594 AI-2E family transporter DVT08_001165 PF00595 PDZ domain DVT08_001170 PF01370 NAD dependent epimerase/dehydratase family DVT08_001170 PF08338 Domain of unknown function (DUF1731) DVT08_001175 PF13193 AMP-binding enzyme C-terminal domain DVT08_001175 PF00501 AMP-binding enzyme DVT08_001180 PF00694 Aconitase C-terminal domain DVT08_001180 PF00330 Aconitase family (aconitate hydratase) DVT08_001195 PF06434 Aconitate hydratase 2 N-terminus DVT08_001195 PF11791 Aconitate B N-terminal domain DVT08_001195 PF00330 Aconitase family (aconitate hydratase) DVT08_001245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DVT08_001255 PF00121 Triosephosphate isomerase DVT08_001270 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DVT08_001275 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DVT08_001280 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DVT08_001285 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DVT08_001295 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DVT08_001295 PF10531 SLBB domain DVT08_001295 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DVT08_001300 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DVT08_001300 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DVT08_001300 PF00384 Molybdopterin oxidoreductase DVT08_001305 PF00146 NADH dehydrogenase DVT08_001310 PF12838 4Fe-4S dicluster domain DVT08_001315 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DVT08_001320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DVT08_001325 PF00361 Proton-conducting membrane transporter DVT08_001325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DVT08_001330 PF00361 Proton-conducting membrane transporter DVT08_001330 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DVT08_001335 PF00361 Proton-conducting membrane transporter DVT08_001340 PF00106 short chain dehydrogenase DVT08_001345 PF03600 Citrate transporter DVT08_001355 PF00486 Transcriptional regulatory protein, C terminal DVT08_001355 PF00072 Response regulator receiver domain DVT08_001360 PF08521 Two-component sensor kinase N-terminal DVT08_001360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_001360 PF00512 His Kinase A (phospho-acceptor) domain DVT08_001375 PF00196 Bacterial regulatory proteins, luxR family DVT08_001375 PF00072 Response regulator receiver domain DVT08_001380 PF00072 Response regulator receiver domain DVT08_001380 PF09456 RcsC Alpha-Beta-Loop (ABL) DVT08_001380 PF00512 His Kinase A (phospho-acceptor) domain DVT08_001380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_001395 PF00375 Sodium:dicarboxylate symporter family DVT08_001400 PF00390 Malic enzyme, N-terminal domain DVT08_001400 PF03949 Malic enzyme, NAD binding domain DVT08_001400 PF01515 Phosphate acetyl/butaryl transferase DVT08_001405 PF00183 Hsp90 protein DVT08_001405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_001415 PF01467 Cytidylyltransferase-like DVT08_001425 PF00037 4Fe-4S binding domain DVT08_001440 PF08460 Bacterial SH3 domain DVT08_001440 PF01551 Peptidase family M23 DVT08_001445 PF01979 Amidohydrolase family DVT08_001450 PF01809 Putative membrane protein insertion efficiency factor DVT08_001455 PF01258 Prokaryotic dksA/traR C4-type zinc finger DVT08_001465 PF05977 Transmembrane secretion effector DVT08_001470 PF02657 Fe-S metabolism associated domain DVT08_001475 PF01406 tRNA synthetases class I (C) catalytic domain DVT08_001475 PF09190 DALR domain DVT08_001490 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DVT08_001490 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DVT08_001495 PF00764 Arginosuccinate synthase DVT08_001500 PF01546 Peptidase family M20/M25/M40 DVT08_001500 PF07687 Peptidase dimerisation domain DVT08_001505 PF00696 Amino acid kinase family DVT08_001505 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase DVT08_001510 PF01118 Semialdehyde dehydrogenase, NAD binding domain DVT08_001515 PF00206 Lyase DVT08_001520 PF01472 PUA domain DVT08_001520 PF00696 Amino acid kinase family DVT08_001525 PF00171 Aldehyde dehydrogenase family DVT08_001570 PF14437 MafB19-like deaminase DVT08_001575 PF01325 Iron dependent repressor, N-terminal DNA binding domain DVT08_001575 PF02742 Iron dependent repressor, metal binding and dimerisation domain DVT08_001580 PF01566 Natural resistance-associated macrophage protein DVT08_001585 PF04377 Arginine-tRNA-protein transferase, C terminus DVT08_001585 PF04376 Arginine-tRNA-protein transferase, N terminus DVT08_001605 PF03797 Autotransporter beta-domain DVT08_001605 PF12951 Passenger-associated-transport-repeat DVT08_001605 PF00082 Subtilase family DVT08_001625 PF01553 Acyltransferase DVT08_001645 PF05221 S-adenosyl-L-homocysteine hydrolase DVT08_001645 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DVT08_001655 PF01351 Ribonuclease HII DVT08_001660 PF02684 Lipid-A-disaccharide synthetase DVT08_001665 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DVT08_001665 PF00132 Bacterial transferase hexapeptide (six repeats) DVT08_001670 PF07977 FabA-like domain DVT08_001675 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DVT08_001675 PF00132 Bacterial transferase hexapeptide (six repeats) DVT08_001680 PF07244 Surface antigen variable number repeat DVT08_001680 PF01103 Surface antigen DVT08_001685 PF02163 Peptidase family M50 DVT08_001685 PF17820 PDZ domain DVT08_001690 PF13288 DXP reductoisomerase C-terminal domain DVT08_001690 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DVT08_001690 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DVT08_001700 PF01255 Putative undecaprenyl diphosphate synthase DVT08_001705 PF01765 Ribosome recycling factor DVT08_001710 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DVT08_001740 PF00696 Amino acid kinase family DVT08_001765 PF01081 KDPG and KHG aldolase DVT08_001770 PF00920 Dehydratase family DVT08_001775 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DVT08_001780 PF02685 Glucokinase DVT08_001785 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DVT08_001785 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DVT08_001790 PF17912 MalK OB fold domain DVT08_001790 PF00005 ABC transporter DVT08_001795 PF01571 Aminomethyltransferase folate-binding domain DVT08_001805 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DVT08_001810 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DVT08_001815 PF00890 FAD binding domain DVT08_001815 PF02910 Fumarate reductase flavoprotein C-term DVT08_001820 PF13085 2Fe-2S iron-sulfur cluster binding domain DVT08_001825 PF03937 Flavinator of succinate dehydrogenase DVT08_001835 PF12704 MacB-like periplasmic core domain DVT08_001835 PF02687 FtsX-like permease family DVT08_001840 PF00005 ABC transporter DVT08_001845 PF00753 Metallo-beta-lactamase superfamily DVT08_001845 PF03772 Competence protein DVT08_001850 PF01618 MotA/TolQ/ExbB proton channel family DVT08_001860 PF00005 ABC transporter DVT08_001860 PF00664 ABC transporter transmembrane region DVT08_001865 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DVT08_001900 PF17482 Phage tail sheath C-terminal domain DVT08_001900 PF04984 Phage tail sheath protein subtilisin-like domain DVT08_001935 PF01381 Helix-turn-helix DVT08_002005 PF00959 Phage lysozyme DVT08_002010 PF01555 DNA methylase DVT08_002070 PF04264 YceI-like domain DVT08_002075 PF13091 PLD-like domain DVT08_002095 PF03358 NADPH-dependent FMN reductase DVT08_002100 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DVT08_002100 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DVT08_002120 PF01367 5'-3' exonuclease, C-terminal SAM fold DVT08_002120 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DVT08_002120 PF01612 3'-5' exonuclease DVT08_002120 PF00476 DNA polymerase family A DVT08_002125 PF01113 Dihydrodipicolinate reductase, N-terminus DVT08_002125 PF05173 Dihydrodipicolinate reductase, C-terminus DVT08_002130 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DVT08_002130 PF00117 Glutamine amidotransferase class-I DVT08_002135 PF02142 MGS-like domain DVT08_002135 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DVT08_002135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DVT08_002140 PF03449 Transcription elongation factor, N-terminal DVT08_002140 PF01272 Transcription elongation factor, GreA/GreB, C-term DVT08_002150 PF17768 RecJ OB domain DVT08_002150 PF02272 DHHA1 domain DVT08_002150 PF01368 DHH family DVT08_002160 PF01336 OB-fold nucleic acid binding domain DVT08_002160 PF00152 tRNA synthetases class II (D, K and N) DVT08_002165 PF00072 Response regulator receiver domain DVT08_002170 PF01627 Hpt domain DVT08_002170 PF00512 His Kinase A (phospho-acceptor) domain DVT08_002170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_002170 PF00072 Response regulator receiver domain DVT08_002175 PF00378 Enoyl-CoA hydratase/isomerase DVT08_002180 PF00696 Amino acid kinase family DVT08_002180 PF01842 ACT domain DVT08_002190 PF08245 Mur ligase middle domain DVT08_002200 PF00293 NUDIX domain DVT08_002205 PF02219 Methylenetetrahydrofolate reductase DVT08_002215 PF02545 Maf-like protein DVT08_002220 PF10150 Ribonuclease E/G family DVT08_002220 PF00575 S1 RNA binding domain DVT08_002230 PF01523 Putative modulator of DNA gyrase DVT08_002235 PF04751 Protein of unknown function (DUF615) DVT08_002240 PF01523 Putative modulator of DNA gyrase DVT08_002245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DVT08_002245 PF03466 LysR substrate binding domain DVT08_002260 PF08240 Alcohol dehydrogenase GroES-like domain DVT08_002260 PF00107 Zinc-binding dehydrogenase DVT08_002270 PF14602 Hexapeptide repeat of succinyl-transferase DVT08_002270 PF12804 MobA-like NTP transferase domain DVT08_002270 PF00132 Bacterial transferase hexapeptide (six repeats) DVT08_002280 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DVT08_002280 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DVT08_002285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DVT08_002285 PF02874 ATP synthase alpha/beta family, beta-barrel domain DVT08_002290 PF00231 ATP synthase DVT08_002295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DVT08_002295 PF02874 ATP synthase alpha/beta family, beta-barrel domain DVT08_002295 PF00306 ATP synthase alpha/beta chain, C terminal domain DVT08_002300 PF00213 ATP synthase delta (OSCP) subunit DVT08_002305 PF00430 ATP synthase B/B' CF(0) DVT08_002310 PF00137 ATP synthase subunit C DVT08_002315 PF00119 ATP synthase A chain DVT08_002325 PF00338 Ribosomal protein S10p/S20e DVT08_002330 PF00297 Ribosomal protein L3 DVT08_002335 PF00573 Ribosomal protein L4/L1 family DVT08_002340 PF00276 Ribosomal protein L23 DVT08_002345 PF00181 Ribosomal Proteins L2, RNA binding domain DVT08_002345 PF03947 Ribosomal Proteins L2, C-terminal domain DVT08_002350 PF00203 Ribosomal protein S19 DVT08_002355 PF00237 Ribosomal protein L22p/L17e DVT08_002360 PF00189 Ribosomal protein S3, C-terminal domain DVT08_002360 PF07650 KH domain DVT08_002365 PF00252 Ribosomal protein L16p/L10e DVT08_002370 PF00831 Ribosomal L29 protein DVT08_002375 PF00366 Ribosomal protein S17 DVT08_002380 PF00238 Ribosomal protein L14p/L23e DVT08_002385 PF00467 KOW motif DVT08_002385 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DVT08_002390 PF00281 Ribosomal protein L5 DVT08_002390 PF00673 ribosomal L5P family C-terminus DVT08_002395 PF00253 Ribosomal protein S14p/S29e DVT08_002400 PF00410 Ribosomal protein S8 DVT08_002405 PF00347 Ribosomal protein L6 DVT08_002410 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DVT08_002415 PF00333 Ribosomal protein S5, N-terminal domain DVT08_002415 PF03719 Ribosomal protein S5, C-terminal domain DVT08_002420 PF00327 Ribosomal protein L30p/L7e DVT08_002425 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DVT08_002430 PF00344 SecY translocase DVT08_002435 PF00416 Ribosomal protein S13/S18 DVT08_002440 PF00411 Ribosomal protein S11 DVT08_002445 PF00163 Ribosomal protein S4/S9 N-terminal domain DVT08_002445 PF01479 S4 domain DVT08_002450 PF01000 RNA polymerase Rpb3/RpoA insert domain DVT08_002450 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DVT08_002450 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DVT08_002455 PF01196 Ribosomal protein L17 DVT08_002460 PF04380 Membrane fusogenic activity DVT08_002485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DVT08_002485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DVT08_002485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DVT08_002500 PF05698 Bacterial trigger factor protein (TF) C-terminus DVT08_002500 PF05697 Bacterial trigger factor protein (TF) DVT08_002505 PF00574 Clp protease DVT08_002510 PF07724 AAA domain (Cdc48 subfamily) DVT08_002510 PF10431 C-terminal, D2-small domain, of ClpB protein DVT08_002510 PF06689 ClpX C4-type zinc finger DVT08_002515 PF00004 ATPase family associated with various cellular activities (AAA) DVT08_002515 PF02190 ATP-dependent protease La (LON) substrate-binding domain DVT08_002515 PF05362 Lon protease (S16) C-terminal proteolytic domain DVT08_002520 PF00216 Bacterial DNA-binding protein DVT08_002545 PF00317 Ribonucleotide reductase, all-alpha domain DVT08_002545 PF03477 ATP cone domain DVT08_002545 PF02867 Ribonucleotide reductase, barrel domain DVT08_002550 PF00268 Ribonucleotide reductase, small chain DVT08_002565 PF01479 S4 domain DVT08_002565 PF00849 RNA pseudouridylate synthase DVT08_002570 PF13419 Haloacid dehalogenase-like hydrolase DVT08_002580 PF00830 Ribosomal L28 family DVT08_002585 PF00471 Ribosomal protein L33 DVT08_002590 PF13396 Phospholipase_D-nuclease N-terminal DVT08_002590 PF13091 PLD-like domain DVT08_002595 PF02798 Glutathione S-transferase, N-terminal domain DVT08_002595 PF00043 Glutathione S-transferase, C-terminal domain DVT08_002600 PF00056 lactate/malate dehydrogenase, NAD binding domain DVT08_002600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DVT08_002605 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DVT08_002610 PF03144 Elongation factor Tu domain 2 DVT08_002610 PF00679 Elongation factor G C-terminus DVT08_002610 PF00009 Elongation factor Tu GTP binding domain DVT08_002620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DVT08_002620 PF00529 HlyD membrane-fusion protein of T1SS DVT08_002645 PF00005 ABC transporter DVT08_002645 PF03412 Peptidase C39 family DVT08_002645 PF00664 ABC transporter transmembrane region DVT08_002650 PF01061 ABC-2 type transporter DVT08_002655 PF00005 ABC transporter DVT08_002660 PF05567 Neisseria PilC beta-propeller domain DVT08_002680 PF00270 DEAD/DEAH box helicase DVT08_002680 PF04408 Helicase associated domain (HA2) DVT08_002680 PF00271 Helicase conserved C-terminal domain DVT08_002680 PF08482 ATP-dependent helicase C-terminal DVT08_002695 PF13185 GAF domain DVT08_002705 PF17243 POTRA domain TamA domain 1 DVT08_002705 PF01103 Surface antigen DVT08_002710 PF04357 TamB, inner membrane protein subunit of TAM complex DVT08_002720 PF00589 Phage integrase family DVT08_002825 PF00330 Aconitase family (aconitate hydratase) DVT08_002825 PF00694 Aconitase C-terminal domain DVT08_002830 PF04303 PrpF protein DVT08_002860 PF01835 MG2 domain DVT08_002860 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DVT08_002860 PF17962 Bacterial macroglobulin domain 6 DVT08_002860 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DVT08_002860 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DVT08_002860 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DVT08_002860 PF07703 Alpha-2-macroglobulin bait region domain DVT08_002860 PF00207 Alpha-2-macroglobulin family DVT08_002865 PF07859 alpha/beta hydrolase fold DVT08_002870 PF12852 Cupin DVT08_002870 PF12833 Helix-turn-helix domain DVT08_002880 PF00929 Exonuclease DVT08_002885 PF00924 Mechanosensitive ion channel DVT08_002885 PF05552 Conserved TM helix DVT08_002890 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DVT08_002890 PF00391 PEP-utilising enzyme, mobile domain DVT08_002890 PF02896 PEP-utilising enzyme, TIM barrel domain DVT08_002895 PF03618 Kinase/pyrophosphorylase DVT08_002915 PF01341 Glycosyl hydrolases family 6 DVT08_002915 PF00553 Cellulose binding domain DVT08_002915 PF00041 Fibronectin type III domain DVT08_002920 PF04055 Radical SAM superfamily DVT08_002920 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DVT08_002925 PF03099 Biotin/lipoate A/B protein ligase family DVT08_002930 PF04359 Protein of unknown function (DUF493) DVT08_002950 PF04286 Protein of unknown function (DUF445) DVT08_002955 PF01595 Cyclin M transmembrane N-terminal domain DVT08_002955 PF03471 Transporter associated domain DVT08_002955 PF00571 CBS domain DVT08_002970 PF00204 DNA gyrase B DVT08_002970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_002970 PF01751 Toprim domain DVT08_002970 PF00986 DNA gyrase B subunit, carboxyl terminus DVT08_002980 PF00117 Glutamine amidotransferase class-I DVT08_002980 PF06418 CTP synthase N-terminus DVT08_002985 PF00793 DAHP synthetase I family DVT08_002990 PF03952 Enolase, N-terminal domain DVT08_002990 PF00113 Enolase, C-terminal TIM barrel domain DVT08_002995 PF04977 Septum formation initiator DVT08_003000 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DVT08_003005 PF02542 YgbB family DVT08_003010 PF01713 Smr domain DVT08_003035 PF02470 MlaD protein DVT08_003035 PF03886 ABC-type transport auxiliary lipoprotein component DVT08_003040 PF00005 ABC transporter DVT08_003045 PF02405 Permease MlaE DVT08_003085 PF00436 Single-strand binding protein family DVT08_003110 PF07963 Prokaryotic N-terminal methylation motif DVT08_003225 PF01134 Glucose inhibited division protein A DVT08_003225 PF13932 GidA associated domain DVT08_003250 PF13649 Methyltransferase domain DVT08_003260 PF02649 Type I GTP cyclohydrolase folE2 DVT08_003265 PF00132 Bacterial transferase hexapeptide (six repeats) DVT08_003270 PF00873 AcrB/AcrD/AcrF family DVT08_003275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DVT08_003275 PF00529 HlyD membrane-fusion protein of T1SS DVT08_003280 PF05088 Bacterial NAD-glutamate dehydrogenase DVT08_003285 PF01513 ATP-NAD kinase DVT08_003305 PF00239 Resolvase, N terminal domain DVT08_003305 PF02796 Helix-turn-helix domain of resolvase DVT08_003310 PF00440 Bacterial regulatory proteins, tetR family DVT08_003320 PF00873 AcrB/AcrD/AcrF family DVT08_003325 PF00106 short chain dehydrogenase DVT08_003355 PF00933 Glycosyl hydrolase family 3 N terminal domain DVT08_003355 PF01915 Glycosyl hydrolase family 3 C-terminal domain DVT08_003365 PF12706 Beta-lactamase superfamily domain DVT08_003375 PF08411 Exonuclease C-terminal DVT08_003375 PF00929 Exonuclease DVT08_003390 PF00999 Sodium/hydrogen exchanger family DVT08_003400 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DVT08_003410 PF01812 5-formyltetrahydrofolate cyclo-ligase family DVT08_003420 PF05164 Cell division protein ZapA DVT08_003430 PF03695 Uncharacterised protein family (UPF0149) DVT08_003435 PF05195 Aminopeptidase P, N-terminal domain DVT08_003435 PF00557 Metallopeptidase family M24 DVT08_003440 PF00293 NUDIX domain DVT08_003445 PF00881 Nitroreductase family DVT08_003480 PF01063 Amino-transferase class IV DVT08_003485 PF02954 Bacterial regulatory protein, Fis family DVT08_003495 PF01381 Helix-turn-helix DVT08_003505 PF00535 Glycosyl transferase family 2 DVT08_003515 PF00925 GTP cyclohydrolase II DVT08_003530 PF08461 Ribonuclease R winged-helix domain DVT08_003530 PF00575 S1 RNA binding domain DVT08_003530 PF00773 RNB domain DVT08_003530 PF08206 Ribonuclease B OB domain DVT08_003530 PF17876 Cold shock domain DVT08_003535 PF08032 RNA 2'-O ribose methyltransferase substrate binding DVT08_003535 PF00588 SpoU rRNA Methylase family DVT08_003540 PF00132 Bacterial transferase hexapeptide (six repeats) DVT08_003545 PF01227 GTP cyclohydrolase I DVT08_003550 PF05662 Coiled stalk of trimeric autotransporter adhesin DVT08_003550 PF03895 YadA-like membrane anchor domain DVT08_003550 PF05658 Head domain of trimeric autotransporter adhesin DVT08_003555 PF03186 CobD/Cbib protein DVT08_003560 PF12805 FUSC-like inner membrane protein yccS DVT08_003565 PF02844 Phosphoribosylglycinamide synthetase, N domain DVT08_003565 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DVT08_003565 PF02843 Phosphoribosylglycinamide synthetase, C domain DVT08_003570 PF02142 MGS-like domain DVT08_003570 PF01808 AICARFT/IMPCHase bienzyme DVT08_003580 PF00588 SpoU rRNA Methylase family DVT08_003590 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DVT08_003590 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DVT08_003610 PF00561 alpha/beta hydrolase fold DVT08_003615 PF03692 Putative zinc- or iron-chelating domain DVT08_003620 PF00795 Carbon-nitrogen hydrolase DVT08_003620 PF02540 NAD synthase DVT08_003625 PF02091 Glycyl-tRNA synthetase alpha subunit DVT08_003630 PF05746 DALR anticodon binding domain DVT08_003630 PF02092 Glycyl-tRNA synthetase beta subunit DVT08_003645 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DVT08_003645 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DVT08_003650 PF00072 Response regulator receiver domain DVT08_003655 PF01584 CheW-like domain DVT08_003660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DVT08_003660 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DVT08_003665 PF01627 Hpt domain DVT08_003665 PF00072 Response regulator receiver domain DVT08_003665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_003665 PF01584 CheW-like domain DVT08_003665 PF02895 Signal transducing histidine kinase, homodimeric domain DVT08_003680 PF00156 Phosphoribosyl transferase domain DVT08_003695 PF02875 Mur ligase family, glutamate ligase domain DVT08_003695 PF08245 Mur ligase middle domain DVT08_003705 PF01432 Peptidase family M3 DVT08_003720 PF01625 Peptide methionine sulfoxide reductase DVT08_003725 PF00375 Sodium:dicarboxylate symporter family DVT08_003730 PF00456 Transketolase, thiamine diphosphate binding domain DVT08_003730 PF02780 Transketolase, C-terminal domain DVT08_003730 PF02779 Transketolase, pyrimidine binding domain DVT08_003735 PF02527 rRNA small subunit methyltransferase G DVT08_003740 PF01648 4'-phosphopantetheinyl transferase superfamily DVT08_003760 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DVT08_003760 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DVT08_003765 PF02910 Fumarate reductase flavoprotein C-term DVT08_003765 PF00890 FAD binding domain DVT08_003770 PF02445 Quinolinate synthetase A protein DVT08_003775 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DVT08_003775 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DVT08_003805 PF04715 Anthranilate synthase component I, N terminal region DVT08_003805 PF00425 chorismate binding enzyme DVT08_003810 PF01026 TatD related DNase DVT08_003825 PF02881 SRP54-type protein, helical bundle domain DVT08_003825 PF00448 SRP54-type protein, GTPase domain DVT08_003830 PF00730 HhH-GPD superfamily base excision DNA repair protein DVT08_003830 PF00633 Helix-hairpin-helix motif DVT08_003830 PF14815 NUDIX domain DVT08_003835 PF04362 Bacterial Fe(2+) trafficking DVT08_003845 PF01709 Transcriptional regulator DVT08_003850 PF02075 Crossover junction endodeoxyribonuclease RuvC DVT08_003855 PF07499 RuvA, C-terminal domain DVT08_003855 PF01330 RuvA N terminal domain DVT08_003860 PF02705 K+ potassium transporter DVT08_003865 PF05496 Holliday junction DNA helicase RuvB P-loop domain DVT08_003865 PF05491 RuvB C-terminal winged helix domain DVT08_003865 PF17864 RuvB AAA lid domain DVT08_003870 PF03061 Thioesterase superfamily DVT08_003875 PF01618 MotA/TolQ/ExbB proton channel family DVT08_003880 PF02472 Biopolymer transport protein ExbD/TolR DVT08_003890 PF04052 TolB amino-terminal domain DVT08_003890 PF07676 WD40-like Beta Propeller Repeat DVT08_003895 PF00691 OmpA family DVT08_003905 PF04055 Radical SAM superfamily DVT08_003910 PF00300 Histidine phosphatase superfamily (branch 1) DVT08_003915 PF04493 Endonuclease V DVT08_003920 PF00854 POT family DVT08_003925 PF00255 Glutathione peroxidase DVT08_003930 PF00970 Oxidoreductase FAD-binding domain DVT08_003930 PF00175 Oxidoreductase NAD-binding domain DVT08_003935 PF01964 Radical SAM ThiC family DVT08_003935 PF13667 ThiC-associated domain DVT08_003940 PF10459 Peptidase S46 DVT08_003945 PF00300 Histidine phosphatase superfamily (branch 1) DVT08_004070 PF06508 Queuosine biosynthesis protein QueC DVT08_004075 PF02938 GAD domain DVT08_004075 PF01336 OB-fold nucleic acid binding domain DVT08_004075 PF00152 tRNA synthetases class II (D, K and N) DVT08_004080 PF05683 Fumarase C-terminus DVT08_004080 PF05681 Fumarate hydratase (Fumerase) DVT08_004105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_004105 PF00512 His Kinase A (phospho-acceptor) domain DVT08_004105 PF00989 PAS fold DVT08_004110 PF02954 Bacterial regulatory protein, Fis family DVT08_004110 PF00158 Sigma-54 interaction domain DVT08_004110 PF00072 Response regulator receiver domain DVT08_004125 PF00909 Ammonium Transporter Family DVT08_004130 PF00543 Nitrogen regulatory protein P-II DVT08_004135 PF03951 Glutamine synthetase, beta-Grasp domain DVT08_004135 PF00120 Glutamine synthetase, catalytic domain DVT08_004140 PF02673 Bacitracin resistance protein BacA DVT08_004145 PF04264 YceI-like domain DVT08_004280 PF00589 Phage integrase family DVT08_004280 PF02899 Phage integrase, N-terminal SAM-like domain DVT08_004295 PF12241 Trans-2-enoyl-CoA reductase catalytic region DVT08_004295 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DVT08_004295 PF07055 Enoyl reductase FAD binding domain DVT08_004305 PF03109 ABC1 family DVT08_004315 PF00551 Formyl transferase DVT08_004320 PF07683 Cobalamin synthesis protein cobW C-terminal domain DVT08_004320 PF02492 CobW/HypB/UreG, nucleotide-binding domain DVT08_004330 PF03969 AFG1-like ATPase DVT08_004335 PF02566 OsmC-like protein DVT08_004340 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DVT08_004345 PF03572 Peptidase family S41 DVT08_004345 PF00595 PDZ domain DVT08_004345 PF11818 C-terminal domain of tail specific protease (DUF3340) DVT08_004345 PF17804 Tail specific protease N-terminal domain DVT08_004350 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DVT08_004350 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DVT08_004355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DVT08_004355 PF00205 Thiamine pyrophosphate enzyme, central domain DVT08_004355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DVT08_004365 PF00291 Pyridoxal-phosphate dependent enzyme DVT08_004370 PF00682 HMGL-like DVT08_004370 PF08502 LeuA allosteric (dimerisation) domain DVT08_004375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DVT08_004375 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DVT08_004380 PF01783 Ribosomal L32p protein family DVT08_004385 PF02620 Large ribosomal RNA subunit accumulation protein YceD DVT08_004395 PF07726 ATPase family associated with various cellular activities (AAA) DVT08_004395 PF17863 AAA lid domain DVT08_004405 PF01841 Transglutaminase-like superfamily DVT08_004405 PF11992 Domain of unknown function (DUF3488) DVT08_004405 PF13559 Domain of unknown function (DUF4129) DVT08_004415 PF01230 HIT domain DVT08_004420 PF13662 Toprim domain DVT08_004420 PF02132 RecR protein DVT08_004425 PF02575 YbaB/EbfC DNA-binding family DVT08_004430 PF12169 DNA polymerase III subunits gamma and tau domain III DVT08_004430 PF12170 DNA polymerase III tau subunit V interacting with alpha DVT08_004430 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DVT08_004455 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DVT08_004455 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DVT08_004460 PF02556 Preprotein translocase subunit SecB DVT08_004465 PF00581 Rhodanese-like domain DVT08_004490 PF08279 HTH domain DVT08_004490 PF03099 Biotin/lipoate A/B protein ligase family DVT08_004490 PF02237 Biotin protein ligase C terminal domain DVT08_004495 PF03309 Type III pantothenate kinase DVT08_004520 PF07963 Prokaryotic N-terminal methylation motif DVT08_004535 PF01168 Alanine racemase, N-terminal domain DVT08_004540 PF05188 MutS domain II DVT08_004540 PF01624 MutS domain I DVT08_004540 PF05192 MutS domain III DVT08_004540 PF05190 MutS family domain IV DVT08_004540 PF00488 MutS domain V DVT08_004545 PF00912 Transglycosylase DVT08_004550 PF01430 Hsp33 protein DVT08_004565 PF01042 Endoribonuclease L-PSP DVT08_004570 PF03706 Lysylphosphatidylglycerol synthase TM region DVT08_004570 PF09924 Uncharacterised conserved protein (DUF2156) DVT08_004580 PF02801 Beta-ketoacyl synthase, C-terminal domain DVT08_004580 PF00109 Beta-ketoacyl synthase, N-terminal domain DVT08_004590 PF00535 Glycosyl transferase family 2 DVT08_004605 PF00437 Type II/IV secretion system protein DVT08_004610 PF00437 Type II/IV secretion system protein DVT08_004625 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DVT08_004625 PF03900 Porphobilinogen deaminase, C-terminal domain DVT08_004630 PF04397 LytTr DNA-binding domain DVT08_004630 PF00072 Response regulator receiver domain DVT08_004635 PF06580 Histidine kinase DVT08_004635 PF07694 5TMR of 5TMR-LYT DVT08_004640 PF02230 Phospholipase/Carboxylesterase DVT08_004645 PF13632 Glycosyl transferase family group 2 DVT08_004660 PF01209 ubiE/COQ5 methyltransferase family DVT08_004675 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DVT08_004680 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DVT08_004690 PF00294 pfkB family carbohydrate kinase DVT08_004695 PF07690 Major Facilitator Superfamily DVT08_004705 PF04102 SlyX DVT08_004710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DVT08_004710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DVT08_004710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DVT08_004715 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DVT08_004715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DVT08_004725 PF00005 ABC transporter DVT08_004755 PF05973 Phage derived protein Gp49-like (DUF891) DVT08_004760 PF01381 Helix-turn-helix DVT08_004810 PF10876 Phage tail assemb.y chaperone protein, TAC DVT08_004865 PF04233 Phage Mu protein F like protein DVT08_004870 PF06381 Protein of unknown function (DUF1073) DVT08_004900 PF00959 Phage lysozyme DVT08_004915 PF08459 UvrC Helix-hairpin-helix N-terminal DVT08_004915 PF01541 GIY-YIG catalytic domain DVT08_004915 PF02151 UvrB/uvrC motif DVT08_004920 PF01066 CDP-alcohol phosphatidyltransferase DVT08_004945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DVT08_004960 PF00202 Aminotransferase class-III DVT08_004965 PF10609 NUBPL iron-transfer P-loop NTPase DVT08_004970 PF02348 Cytidylyltransferase DVT08_004975 PF01451 Low molecular weight phosphotyrosine protein phosphatase DVT08_005020 PF00436 Single-strand binding protein family DVT08_005035 PF00005 ABC transporter DVT08_005035 PF12848 ABC transporter DVT08_005040 PF00593 TonB dependent receptor DVT08_005040 PF07715 TonB-dependent Receptor Plug Domain DVT08_005050 PF00593 TonB dependent receptor DVT08_005050 PF07715 TonB-dependent Receptor Plug Domain DVT08_005055 PF02254 TrkA-N domain DVT08_005055 PF00999 Sodium/hydrogen exchanger family DVT08_005060 PF12849 PBP superfamily domain DVT08_005065 PF00528 Binding-protein-dependent transport system inner membrane component DVT08_005070 PF00528 Binding-protein-dependent transport system inner membrane component DVT08_005075 PF00005 ABC transporter DVT08_005080 PF01895 PhoU domain DVT08_005085 PF00929 Exonuclease DVT08_005090 PF00398 Ribosomal RNA adenine dimethylase DVT08_005095 PF04379 ApaG domain DVT08_005100 PF00149 Calcineurin-like phosphoesterase DVT08_005120 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DVT08_005140 PF00929 Exonuclease DVT08_005145 PF00075 RNase H DVT08_005155 PF00753 Metallo-beta-lactamase superfamily DVT08_005155 PF16123 Hydroxyacylglutathione hydrolase C-terminus DVT08_005175 PF00575 S1 RNA binding domain DVT08_005175 PF17674 HHH domain DVT08_005175 PF09371 Tex-like protein N-terminal domain DVT08_005175 PF16921 Tex protein YqgF-like domain DVT08_005190 PF00719 Inorganic pyrophosphatase DVT08_005195 PF00085 Thioredoxin DVT08_005205 PF13603 Leucyl-tRNA synthetase, Domain 2 DVT08_005205 PF00133 tRNA synthetases class I (I, L, M and V) DVT08_005205 PF08264 Anticodon-binding domain of tRNA DVT08_005220 PF01467 Cytidylyltransferase-like DVT08_005250 PF13406 Transglycosylase SLT domain DVT08_005255 PF03330 Lytic transglycolase DVT08_005255 PF05036 Sporulation related domain DVT08_005365 PF09285 Elongation factor P, C-terminal DVT08_005365 PF08207 Elongation factor P (EF-P) KOW-like domain DVT08_005365 PF01132 Elongation factor P (EF-P) OB domain DVT08_005370 PF02913 FAD linked oxidases, C-terminal domain DVT08_005370 PF01565 FAD binding domain DVT08_005375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DVT08_005375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DVT08_005375 PF01842 ACT domain DVT08_005380 PF13520 Amino acid permease DVT08_005385 PF13520 Amino acid permease DVT08_005390 PF00596 Class II Aldolase and Adducin N-terminal domain DVT08_005395 PF03079 ARD/ARD' family DVT08_005405 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DVT08_005405 PF01502 Phosphoribosyl-AMP cyclohydrolase DVT08_005410 PF00977 Histidine biosynthesis protein DVT08_005415 PF00977 Histidine biosynthesis protein DVT08_005420 PF00117 Glutamine amidotransferase class-I DVT08_005425 PF00475 Imidazoleglycerol-phosphate dehydratase DVT08_005430 PF00155 Aminotransferase class I and II DVT08_005435 PF00815 Histidinol dehydrogenase DVT08_005440 PF08029 HisG, C-terminal domain DVT08_005440 PF01634 ATP phosphoribosyltransferase DVT08_005450 PF13393 Histidyl-tRNA synthetase DVT08_005450 PF03129 Anticodon binding domain DVT08_005460 PF00291 Pyridoxal-phosphate dependent enzyme DVT08_005460 PF14821 Threonine synthase N terminus DVT08_005465 PF00288 GHMP kinases N terminal domain DVT08_005465 PF08544 GHMP kinases C terminal DVT08_005470 PF13840 ACT domain DVT08_005470 PF00696 Amino acid kinase family DVT08_005470 PF03447 Homoserine dehydrogenase, NAD binding domain DVT08_005470 PF00742 Homoserine dehydrogenase DVT08_005470 PF01842 ACT domain DVT08_005475 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DVT08_005475 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DVT08_005480 PF03652 Holliday junction resolvase DVT08_005485 PF02622 Uncharacterized ACR, COG1678 DVT08_005490 PF07943 Penicillin-binding protein 5, C-terminal domain DVT08_005490 PF00768 D-alanyl-D-alanine carboxypeptidase DVT08_005500 PF00141 Peroxidase DVT08_005505 PF01556 DnaJ C terminal domain DVT08_005505 PF00226 DnaJ domain DVT08_005515 PF06832 Penicillin-Binding Protein C-terminus Family DVT08_005515 PF00912 Transglycosylase DVT08_005515 PF00905 Penicillin binding protein transpeptidase domain DVT08_005525 PF00593 TonB dependent receptor DVT08_005525 PF07715 TonB-dependent Receptor Plug Domain DVT08_005530 PF08281 Sigma-70, region 4 DVT08_005530 PF04542 Sigma-70 region 2 DVT08_005540 PF13180 PDZ domain DVT08_005545 PF06421 GTP-binding protein LepA C-terminus DVT08_005545 PF03144 Elongation factor Tu domain 2 DVT08_005545 PF00009 Elongation factor Tu GTP binding domain DVT08_005545 PF00679 Elongation factor G C-terminus DVT08_005550 PF10502 Signal peptidase, peptidase S26 DVT08_005560 PF14622 Ribonuclease-III-like DVT08_005560 PF00035 Double-stranded RNA binding motif DVT08_005565 PF07650 KH domain DVT08_005565 PF01926 50S ribosome-binding GTPase DVT08_005570 PF11967 Recombination protein O N terminal DVT08_005570 PF02565 Recombination protein O C terminal DVT08_005575 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DVT08_005575 PF02779 Transketolase, pyrimidine binding domain DVT08_005575 PF02780 Transketolase, C-terminal domain DVT08_005580 PF00474 Sodium:solute symporter family DVT08_005590 PF00501 AMP-binding enzyme DVT08_005590 PF13193 AMP-binding enzyme C-terminal domain DVT08_005590 PF16177 Acetyl-coenzyme A synthetase N-terminus DVT08_005595 PF02659 Putative manganese efflux pump DVT08_005610 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DVT08_005610 PF07676 WD40-like Beta Propeller Repeat DVT08_005610 PF00326 Prolyl oligopeptidase family DVT08_005615 PF03169 OPT oligopeptide transporter protein DVT08_005625 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DVT08_005625 PF01266 FAD dependent oxidoreductase DVT08_005630 PF00230 Major intrinsic protein DVT08_005635 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DVT08_005635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DVT08_005645 PF01263 Aldose 1-epimerase DVT08_005650 PF01717 Cobalamin-independent synthase, Catalytic domain DVT08_005650 PF08267 Cobalamin-independent synthase, N-terminal domain DVT08_005655 PF02677 Epoxyqueuosine reductase QueH DVT08_005660 PF00857 Isochorismatase family DVT08_005665 PF00501 AMP-binding enzyme DVT08_005675 PF00535 Glycosyl transferase family 2 DVT08_005680 PF01370 NAD dependent epimerase/dehydratase family DVT08_005685 PF17762 HTH domain found in ParB protein DVT08_005685 PF02195 ParB-like nuclease domain DVT08_005690 PF13614 AAA domain DVT08_005700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DVT08_005700 PF02403 Seryl-tRNA synthetase N-terminal domain DVT08_005705 PF03544 Gram-negative bacterial TonB protein C-terminal DVT08_005745 PF01555 DNA methylase DVT08_005750 PF00959 Phage lysozyme DVT08_005800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DVT08_005805 PF01842 ACT domain DVT08_005805 PF01817 Chorismate mutase type II DVT08_005805 PF00800 Prephenate dehydratase DVT08_005810 PF00266 Aminotransferase class-V DVT08_005820 PF12679 ABC-2 family transporter protein DVT08_005825 PF00005 ABC transporter DVT08_005835 PF00186 Dihydrofolate reductase DVT08_005840 PF00303 Thymidylate synthase DVT08_005845 PF01790 Prolipoprotein diacylglyceryl transferase DVT08_005850 PF01219 Prokaryotic diacylglycerol kinase DVT08_005855 PF00072 Response regulator receiver domain DVT08_005855 PF00486 Transcriptional regulatory protein, C terminal DVT08_005865 PF02153 Prephenate dehydrogenase DVT08_005865 PF01817 Chorismate mutase type II DVT08_005870 PF01556 DnaJ C terminal domain DVT08_005870 PF00226 DnaJ domain DVT08_005870 PF00684 DnaJ central domain DVT08_005875 PF00012 Hsp70 protein DVT08_005880 PF01025 GrpE DVT08_005885 PF01628 HrcA protein C terminal domain DVT08_005885 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DVT08_005890 PF02463 RecF/RecN/SMC N terminal domain DVT08_005895 PF01475 Ferric uptake regulator family DVT08_005900 PF04355 SmpA / OmlA family DVT08_005905 PF03658 RnfH family Ubiquitin DVT08_005915 PF01668 SmpB protein DVT08_005925 PF00313 'Cold-shock' DNA-binding domain DVT08_005930 PF01048 Phosphorylase superfamily DVT08_005935 PF00156 Phosphoribosyl transferase domain DVT08_005940 PF00933 Glycosyl hydrolase family 3 N terminal domain DVT08_005945 PF01928 CYTH domain DVT08_005950 PF05958 tRNA (Uracil-5-)-methyltransferase DVT08_005955 PF00486 Transcriptional regulatory protein, C terminal DVT08_005955 PF00072 Response regulator receiver domain DVT08_005960 PF03808 Glycosyl transferase WecB/TagA/CpsF family DVT08_005970 PF14667 Polysaccharide biosynthesis C-terminal domain DVT08_005980 PF00534 Glycosyl transferases group 1 DVT08_005980 PF13439 Glycosyltransferase Family 4 DVT08_005995 PF02397 Bacterial sugar transferase DVT08_006010 PF00180 Isocitrate/isopropylmalate dehydrogenase DVT08_006015 PF00694 Aconitase C-terminal domain DVT08_006020 PF00330 Aconitase family (aconitate hydratase) DVT08_006040 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DVT08_006040 PF14489 QueF-like protein DVT08_006045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DVT08_006050 PF00873 AcrB/AcrD/AcrF family DVT08_006055 PF00873 AcrB/AcrD/AcrF family DVT08_006065 PF00107 Zinc-binding dehydrogenase DVT08_006065 PF08240 Alcohol dehydrogenase GroES-like domain DVT08_006090 PF00462 Glutaredoxin DVT08_006095 PF01522 Polysaccharide deacetylase DVT08_006115 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DVT08_006125 PF02796 Helix-turn-helix domain of resolvase DVT08_006125 PF00239 Resolvase, N terminal domain DVT08_006135 PF00239 Resolvase, N terminal domain DVT08_006170 PF01555 DNA methylase DVT08_006175 PF00959 Phage lysozyme DVT08_006260 PF07963 Prokaryotic N-terminal methylation motif DVT08_006260 PF00114 Pilin (bacterial filament) DVT08_006275 PF10415 Fumarase C C-terminus DVT08_006275 PF00206 Lyase DVT08_006280 PF00206 Lyase DVT08_006280 PF08328 Adenylosuccinate lyase C-terminal DVT08_006285 PF08007 Cupin superfamily protein DVT08_006290 PF16870 2-oxoglutarate dehydrogenase C-terminal DVT08_006290 PF16078 2-oxoglutarate dehydrogenase N-terminus DVT08_006290 PF00676 Dehydrogenase E1 component DVT08_006290 PF02779 Transketolase, pyrimidine binding domain DVT08_006295 PF02817 e3 binding domain DVT08_006295 PF00364 Biotin-requiring enzyme DVT08_006295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DVT08_006305 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVT08_006305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DVT08_006315 PF00899 ThiF family DVT08_006340 PF00325 Bacterial regulatory proteins, crp family DVT08_006340 PF00027 Cyclic nucleotide-binding domain DVT08_006345 PF02675 S-adenosylmethionine decarboxylase DVT08_006350 PF03232 Ubiquinone biosynthesis protein COQ7 DVT08_006360 PF00572 Ribosomal protein L13 DVT08_006365 PF00380 Ribosomal protein S9/S16 DVT08_006370 PF00285 Citrate synthase, C-terminal domain DVT08_006375 PF01197 Ribosomal protein L31 DVT08_006380 PF00814 Glycoprotease family DVT08_006385 PF03466 LysR substrate binding domain DVT08_006385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DVT08_006390 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVT08_006390 PF13192 Thioredoxin domain DVT08_006395 PF10417 C-terminal domain of 1-Cys peroxiredoxin DVT08_006395 PF00578 AhpC/TSA family DVT08_006400 PF05658 Head domain of trimeric autotransporter adhesin DVT08_006400 PF03895 YadA-like membrane anchor domain DVT08_006400 PF05662 Coiled stalk of trimeric autotransporter adhesin DVT08_006405 PF03958 Bacterial type II/III secretion system short domain DVT08_006405 PF00263 Bacterial type II and III secretion system protein DVT08_006415 PF10741 Type II secretion system (T2SS), protein M subtype b DVT08_006420 PF05137 Fimbrial assembly protein (PilN) DVT08_006425 PF03934 Type II secretion system (T2SS), protein K DVT08_006435 PF07963 Prokaryotic N-terminal methylation motif DVT08_006440 PF12019 Type II transport protein GspH DVT08_006445 PF08334 Type II secretion system (T2SS), protein G DVT08_006450 PF00482 Type II secretion system (T2SS), protein F DVT08_006455 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DVT08_006455 PF00437 Type II/IV secretion system protein DVT08_006460 PF13018 Extended Signal Peptide of Type V secretion system DVT08_006460 PF03895 YadA-like membrane anchor domain DVT08_006460 PF05658 Head domain of trimeric autotransporter adhesin DVT08_006460 PF05662 Coiled stalk of trimeric autotransporter adhesin DVT08_006475 PF05175 Methyltransferase small domain DVT08_006475 PF17827 PrmC N-terminal domain DVT08_006480 PF00561 alpha/beta hydrolase fold DVT08_006495 PF06969 HemN C-terminal domain DVT08_006495 PF04055 Radical SAM superfamily DVT08_006500 PF01725 Ham1 family DVT08_006505 PF01138 3' exoribonuclease family, domain 1 DVT08_006505 PF03725 3' exoribonuclease family, domain 2 DVT08_006510 PF03755 YicC-like family, N-terminal region DVT08_006510 PF08340 Domain of unknown function (DUF1732) DVT08_006515 PF00625 Guanylate kinase DVT08_006520 PF01192 RNA polymerase Rpb6 DVT08_006525 PF00009 Elongation factor Tu GTP binding domain DVT08_006530 PF01507 Phosphoadenosine phosphosulfate reductase family DVT08_006535 PF00175 Oxidoreductase NAD-binding domain DVT08_006535 PF00258 Flavodoxin DVT08_006535 PF00667 FAD binding domain DVT08_006540 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DVT08_006540 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DVT08_006545 PF01507 Phosphoadenosine phosphosulfate reductase family DVT08_006560 PF13369 Transglutaminase-like superfamily DVT08_006580 PF01433 Peptidase family M1 domain DVT08_006580 PF11838 ERAP1-like C-terminal domain DVT08_006585 PF01209 ubiE/COQ5 methyltransferase family DVT08_006730 PF00959 Phage lysozyme DVT08_006800 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA DVT08_006805 PF15723 Motility quorum-sensing regulator, toxin of MqsA DVT08_006830 PF04984 Phage tail sheath protein subtilisin-like domain DVT08_006830 PF17482 Phage tail sheath C-terminal domain DVT08_006875 PF07724 AAA domain (Cdc48 subfamily) DVT08_006875 PF10431 C-terminal, D2-small domain, of ClpB protein DVT08_006875 PF00004 ATPase family associated with various cellular activities (AAA) DVT08_006880 PF00227 Proteasome subunit DVT08_006885 PF00589 Phage integrase family DVT08_006885 PF02899 Phage integrase, N-terminal SAM-like domain DVT08_006895 PF01678 Diaminopimelate epimerase DVT08_006905 PF00326 Prolyl oligopeptidase family DVT08_006905 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DVT08_006915 PF02082 Transcriptional regulator DVT08_006920 PF01458 Uncharacterized protein family (UPF0051) DVT08_006925 PF00005 ABC transporter DVT08_006930 PF01458 Uncharacterized protein family (UPF0051) DVT08_006935 PF00266 Aminotransferase class-V DVT08_006940 PF00355 Rieske [2Fe-2S] domain DVT08_006945 PF13439 Glycosyltransferase Family 4 DVT08_006945 PF00534 Glycosyl transferases group 1 DVT08_006950 PF01522 Polysaccharide deacetylase DVT08_006955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DVT08_006955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DVT08_006955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DVT08_006955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DVT08_006960 PF01039 Carboxyl transferase domain DVT08_006960 PF17848 Acetyl-coA carboxylase zinc finger domain DVT08_006965 PF01979 Amidohydrolase family DVT08_006970 PF01380 SIS domain DVT08_006975 PF00356 Bacterial regulatory proteins, lacI family DVT08_006980 PF07690 Major Facilitator Superfamily DVT08_006990 PF02685 Glucokinase DVT08_007010 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DVT08_007015 PF00512 His Kinase A (phospho-acceptor) domain DVT08_007015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_007020 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DVT08_007025 PF00004 ATPase family associated with various cellular activities (AAA) DVT08_007025 PF12002 MgsA AAA+ ATPase C terminal DVT08_007025 PF16193 AAA C-terminal domain DVT08_007030 PF03548 Outer membrane lipoprotein carrier protein LolA DVT08_007040 PF09397 Ftsk gamma domain DVT08_007040 PF01580 FtsK/SpoIIIE family DVT08_007040 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DVT08_007040 PF17854 FtsK alpha domain DVT08_007045 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVT08_007055 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DVT08_007060 PF01176 Translation initiation factor 1A / IF-1 DVT08_007065 PF10431 C-terminal, D2-small domain, of ClpB protein DVT08_007065 PF00004 ATPase family associated with various cellular activities (AAA) DVT08_007065 PF07724 AAA domain (Cdc48 subfamily) DVT08_007065 PF17871 AAA lid domain DVT08_007065 PF02861 Clp amino terminal domain, pathogenicity island component DVT08_007070 PF02617 ATP-dependent Clp protease adaptor protein ClpS DVT08_007075 PF00293 NUDIX domain DVT08_007085 PF04356 Protein of unknown function (DUF489) DVT08_007095 PF01323 DSBA-like thioredoxin domain DVT08_007100 PF01323 DSBA-like thioredoxin domain DVT08_007115 PF01926 50S ribosome-binding GTPase DVT08_007120 PF04107 Glutamate-cysteine ligase family 2(GCS2) DVT08_007125 PF00202 Aminotransferase class-III DVT08_007130 PF00520 Ion transport protein DVT08_007130 PF00027 Cyclic nucleotide-binding domain DVT08_007135 PF00589 Phage integrase family DVT08_007135 PF02899 Phage integrase, N-terminal SAM-like domain DVT08_007140 PF13098 Thioredoxin-like domain DVT08_007140 PF10411 Disulfide bond isomerase protein N-terminus DVT08_007145 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DVT08_007145 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DVT08_007145 PF02769 AIR synthase related protein, C-terminal domain DVT08_007175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DVT08_007180 PF01722 BolA-like protein DVT08_007185 PF00571 CBS domain DVT08_007185 PF01380 SIS domain DVT08_007205 PF00005 ABC transporter DVT08_007205 PF12399 Branched-chain amino acid ATP-binding cassette transporter DVT08_007210 PF04963 Sigma-54 factor, core binding domain DVT08_007210 PF04552 Sigma-54, DNA binding domain DVT08_007210 PF00309 Sigma-54 factor, Activator interacting domain (AID) DVT08_007215 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DVT08_007220 PF07475 HPr Serine kinase C-terminal domain DVT08_007220 PF02603 HPr Serine kinase N terminus DVT08_007225 PF03668 P-loop ATPase protein family DVT08_007235 PF00381 PTS HPr component phosphorylation site DVT08_007240 PF05524 PEP-utilising enzyme, N-terminal DVT08_007240 PF00391 PEP-utilising enzyme, mobile domain DVT08_007240 PF02896 PEP-utilising enzyme, TIM barrel domain DVT08_007265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DVT08_007280 PF00436 Single-strand binding protein family DVT08_007285 PF00348 Polyprenyl synthetase DVT08_007290 PF06481 COX Aromatic Rich Motif DVT08_007290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DVT08_007295 PF00115 Cytochrome C and Quinol oxidase polypeptide I DVT08_007300 PF00510 Cytochrome c oxidase subunit III DVT08_007305 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DVT08_007310 PF02347 Glycine cleavage system P-protein DVT08_007315 PF04408 Helicase associated domain (HA2) DVT08_007315 PF00270 DEAD/DEAH box helicase DVT08_007315 PF11898 Domain of unknown function (DUF3418) DVT08_007315 PF00271 Helicase conserved C-terminal domain DVT08_007315 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DVT08_007320 PF00210 Ferritin-like domain DVT08_007325 PF00570 HRDC domain DVT08_007325 PF09382 RQC domain DVT08_007325 PF00271 Helicase conserved C-terminal domain DVT08_007325 PF00270 DEAD/DEAH box helicase DVT08_007325 PF16124 RecQ zinc-binding DVT08_007335 PF00296 Luciferase-like monooxygenase DVT08_007340 PF18073 Rubredoxin metal binding domain DVT08_007345 PF00290 Tryptophan synthase alpha chain DVT08_007350 PF00291 Pyridoxal-phosphate dependent enzyme DVT08_007355 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DVT08_007360 PF01416 tRNA pseudouridine synthase DVT08_007370 PF02774 Semialdehyde dehydrogenase, dimerisation domain DVT08_007370 PF01118 Semialdehyde dehydrogenase, NAD binding domain DVT08_007375 PF01264 Chorismate synthase DVT08_007380 PF05175 Methyltransferase small domain DVT08_007385 PF02630 SCO1/SenC DVT08_007390 PF02666 Phosphatidylserine decarboxylase DVT08_007395 PF14718 Soluble lytic murein transglycosylase L domain DVT08_007395 PF01464 Transglycosylase SLT domain DVT08_007400 PF12627 Probable RNA and SrmB- binding site of polymerase A DVT08_007400 PF01966 HD domain DVT08_007400 PF01743 Poly A polymerase head domain DVT08_007405 PF00753 Metallo-beta-lactamase superfamily DVT08_007410 PF01040 UbiA prenyltransferase family DVT08_007420 PF00155 Aminotransferase class I and II DVT08_007425 PF12697 Alpha/beta hydrolase family DVT08_007435 PF01047 MarR family DVT08_007440 PF00521 DNA gyrase/topoisomerase IV, subunit A DVT08_007440 PF03989 DNA gyrase C-terminal domain, beta-propeller DVT08_007445 PF04542 Sigma-70 region 2 DVT08_007445 PF04546 Sigma-70, non-essential region DVT08_007445 PF03979 Sigma-70 factor, region 1.1 DVT08_007445 PF00140 Sigma-70 factor, region 1.2 DVT08_007445 PF04545 Sigma-70, region 4 DVT08_007445 PF04539 Sigma-70 region 3 DVT08_007455 PF12857 TOBE-like domain DVT08_007455 PF00005 ABC transporter DVT08_007460 PF00528 Binding-protein-dependent transport system inner membrane component DVT08_007465 PF00528 Binding-protein-dependent transport system inner membrane component DVT08_007480 PF03932 CutC family DVT08_007490 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DVT08_007490 PF00749 tRNA synthetases class I (E and Q), catalytic domain DVT08_007495 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DVT08_007495 PF01243 Pyridoxamine 5'-phosphate oxidase DVT08_007500 PF01202 Shikimate kinase DVT08_007505 PF01761 3-dehydroquinate synthase DVT08_007510 PF01208 Uroporphyrinogen decarboxylase (URO-D) DVT08_007515 PF17149 Periplasmic sensor domain found in signal transduction proteins DVT08_007515 PF00512 His Kinase A (phospho-acceptor) domain DVT08_007515 PF01627 Hpt domain DVT08_007515 PF00072 Response regulator receiver domain DVT08_007515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_007515 PF00672 HAMP domain DVT08_007520 PF04264 YceI-like domain DVT08_007535 PF00730 HhH-GPD superfamily base excision DNA repair protein DVT08_007550 PF03775 Septum formation inhibitor MinC, C-terminal domain DVT08_007550 PF05209 Septum formation inhibitor MinC, N-terminal domain DVT08_007555 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DVT08_007560 PF03776 Septum formation topological specificity factor MinE DVT08_007575 PF13291 ACT domain DVT08_007575 PF04607 Region found in RelA / SpoT proteins DVT08_007575 PF02824 TGS domain DVT08_007580 PF02547 Queuosine biosynthesis protein DVT08_007585 PF01098 Cell cycle protein DVT08_007590 PF03717 Penicillin-binding Protein dimerisation domain DVT08_007590 PF00905 Penicillin binding protein transpeptidase domain DVT08_007595 PF04093 rod shape-determining protein MreD DVT08_007600 PF04085 rod shape-determining protein MreC DVT08_007645 PF12323 Helix-turn-helix domain DVT08_007645 PF07282 Putative transposase DNA-binding domain DVT08_007645 PF01385 Probable transposase DVT08_007650 PF00239 Resolvase, N terminal domain DVT08_007655 PF00155 Aminotransferase class I and II DVT08_007660 PF00005 ABC transporter DVT08_007660 PF03412 Peptidase C39 family DVT08_007660 PF00664 ABC transporter transmembrane region DVT08_007685 PF06594 Haemolysin-type calcium binding protein related domain DVT08_007685 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DVT08_007705 PF02401 LytB protein DVT08_007710 PF01252 Signal peptidase (SPase) II DVT08_007715 PF00133 tRNA synthetases class I (I, L, M and V) DVT08_007715 PF06827 Zinc finger found in FPG and IleRS DVT08_007715 PF08264 Anticodon-binding domain of tRNA DVT08_007720 PF06574 FAD synthetase DVT08_007720 PF01687 Riboflavin kinase DVT08_007725 PF03023 Lipid II flippase MurJ DVT08_007730 PF01649 Ribosomal protein S20 DVT08_007735 PF01926 50S ribosome-binding GTPase DVT08_007735 PF01018 GTP1/OBG DVT08_007740 PF01016 Ribosomal L27 protein DVT08_007745 PF00829 Ribosomal prokaryotic L21 protein DVT08_007750 PF00005 ABC transporter DVT08_007750 PF17755 UvrA DNA-binding domain DVT08_007750 PF17760 UvrA interaction domain DVT08_007760 PF00958 GMP synthase C terminal domain DVT08_007760 PF02540 NAD synthase DVT08_007760 PF00117 Glutamine amidotransferase class-I DVT08_007765 PF00478 IMP dehydrogenase / GMP reductase domain DVT08_007765 PF00571 CBS domain DVT08_007770 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DVT08_007770 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DVT08_007775 PF00483 Nucleotidyl transferase DVT08_007780 PF02719 Polysaccharide biosynthesis protein DVT08_007785 PF00953 Glycosyl transferase family 4 DVT08_007790 PF18073 Rubredoxin metal binding domain DVT08_007800 PF00216 Bacterial DNA-binding protein DVT08_007805 PF00575 S1 RNA binding domain DVT08_007810 PF02224 Cytidylate kinase DVT08_007815 PF00444 Ribosomal protein L36 DVT08_007825 PF04371 Porphyromonas-type peptidyl-arginine deiminase DVT08_007830 PF00795 Carbon-nitrogen hydrolase DVT08_007845 PF00528 Binding-protein-dependent transport system inner membrane component DVT08_007850 PF00528 Binding-protein-dependent transport system inner membrane component DVT08_007870 PF02616 Segregation and condensation protein ScpA DVT08_007875 PF04079 Segregation and condensation complex subunit ScpB DVT08_007880 PF01479 S4 domain DVT08_007880 PF00849 RNA pseudouridylate synthase DVT08_007890 PF00795 Carbon-nitrogen hydrolase DVT08_007895 PF00155 Aminotransferase class I and II DVT08_007900 PF00005 ABC transporter DVT08_007905 PF03379 CcmB protein DVT08_007910 PF01578 Cytochrome C assembly protein DVT08_007920 PF03100 CcmE DVT08_007925 PF01578 Cytochrome C assembly protein DVT08_007925 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DVT08_007930 PF08534 Redoxin DVT08_007935 PF03918 Cytochrome C biogenesis protein DVT08_007950 PF00561 alpha/beta hydrolase fold DVT08_007960 PF00295 Glycosyl hydrolases family 28 DVT08_007975 PF13419 Haloacid dehalogenase-like hydrolase DVT08_007985 PF01979 Amidohydrolase family DVT08_007990 PF01132 Elongation factor P (EF-P) OB domain DVT08_007990 PF08207 Elongation factor P (EF-P) KOW-like domain DVT08_007990 PF09285 Elongation factor P, C-terminal DVT08_007995 PF04055 Radical SAM superfamily DVT08_008000 PF00588 SpoU rRNA Methylase family DVT08_008005 PF00459 Inositol monophosphatase family DVT08_008030 PF09115 DNA polymerase III, delta subunit, C terminal DVT08_008035 PF02618 YceG-like family DVT08_008040 PF04715 Anthranilate synthase component I, N terminal region DVT08_008040 PF00425 chorismate binding enzyme DVT08_008045 PF00109 Beta-ketoacyl synthase, N-terminal domain DVT08_008045 PF02801 Beta-ketoacyl synthase, C-terminal domain DVT08_008050 PF00550 Phosphopantetheine attachment site DVT08_008060 PF00698 Acyl transferase domain DVT08_008065 PF00456 Transketolase, thiamine diphosphate binding domain DVT08_008065 PF17831 Pyruvate dehydrogenase E1 component middle domain DVT08_008070 PF06594 Haemolysin-type calcium binding protein related domain DVT08_008070 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DVT08_008100 PF00348 Polyprenyl synthetase DVT08_008105 PF02609 Exonuclease VII small subunit DVT08_008110 PF09179 TilS substrate binding domain DVT08_008110 PF11734 TilS substrate C-terminal domain DVT08_008110 PF01171 PP-loop family DVT08_008120 PF00245 Alkaline phosphatase DVT08_008125 PF00375 Sodium:dicarboxylate symporter family DVT08_008135 PF00877 NlpC/P60 family DVT08_008140 PF00877 NlpC/P60 family DVT08_008145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DVT08_008150 PF04235 Protein of unknown function (DUF418) DVT08_008160 PF00633 Helix-hairpin-helix motif DVT08_008160 PF00730 HhH-GPD superfamily base excision DNA repair protein DVT08_008160 PF10576 Iron-sulfur binding domain of endonuclease III DVT08_008170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DVT08_008170 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DVT08_008185 PF01555 DNA methylase DVT08_008275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DVT08_008275 PF01488 Shikimate / quinate 5-dehydrogenase DVT08_008275 PF08501 Shikimate dehydrogenase substrate binding domain DVT08_008285 PF02581 Thiamine monophosphate synthase DVT08_008285 PF08543 Phosphomethylpyrimidine kinase DVT08_008290 PF11412 Disulphide bond corrector protein DsbC DVT08_008290 PF02683 Cytochrome C biogenesis protein transmembrane region DVT08_008295 PF03091 CutA1 divalent ion tolerance protein DVT08_008300 PF00166 Chaperonin 10 Kd subunit DVT08_008305 PF00118 TCP-1/cpn60 chaperonin family DVT08_008330 PF01370 NAD dependent epimerase/dehydratase family DVT08_008335 PF01370 NAD dependent epimerase/dehydratase family DVT08_008340 PF16363 GDP-mannose 4,6 dehydratase DVT08_008355 PF00291 Pyridoxal-phosphate dependent enzyme DVT08_008375 PF00593 TonB dependent receptor DVT08_008375 PF07715 TonB-dependent Receptor Plug Domain DVT08_008380 PF13640 2OG-Fe(II) oxygenase superfamily DVT08_008380 PF18331 PKHD-type hydroxylase C-terminal domain DVT08_008400 PF02424 ApbE family DVT08_008410 PF01636 Phosphotransferase enzyme family DVT08_008415 PF00483 Nucleotidyl transferase DVT08_008420 PF00308 Bacterial dnaA protein DVT08_008425 PF01594 AI-2E family transporter DVT08_008435 PF00586 AIR synthase related protein, N-terminal domain DVT08_008435 PF02769 AIR synthase related protein, C-terminal domain DVT08_008440 PF00551 Formyl transferase DVT08_008455 PF02223 Thymidylate kinase DVT08_008460 PF05649 Peptidase family M13 DVT08_008460 PF01431 Peptidase family M13 DVT08_008470 PF07977 FabA-like domain DVT08_008475 PF01171 PP-loop family DVT08_008480 PF04381 Putative exonuclease, RdgC DVT08_008490 PF00762 Ferrochelatase DVT08_008500 PF02416 mttA/Hcf106 family DVT08_008505 PF02416 mttA/Hcf106 family DVT08_008510 PF00902 Sec-independent protein translocase protein (TatC) DVT08_008520 PF00117 Glutamine amidotransferase class-I DVT08_008520 PF00958 GMP synthase C terminal domain DVT08_008535 PF00127 Copper binding proteins, plastocyanin/azurin family DVT08_008540 PF03193 RsgA GTPase DVT08_008545 PF02021 Uncharacterised protein family UPF0102 DVT08_008550 PF04348 LppC putative lipoprotein DVT08_008555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DVT08_008560 PF00593 TonB dependent receptor DVT08_008560 PF07715 TonB-dependent Receptor Plug Domain DVT08_008565 PF09334 tRNA synthetases class I (M) DVT08_008565 PF01588 Putative tRNA binding domain DVT08_008570 PF04060 Putative Fe-S cluster DVT08_008625 PF02086 D12 class N6 adenine-specific DNA methyltransferase DVT08_008650 PF07963 Prokaryotic N-terminal methylation motif DVT08_008650 PF00114 Pilin (bacterial filament) DVT08_008655 PF05567 Neisseria PilC beta-propeller domain DVT08_008675 PF07963 Prokaryotic N-terminal methylation motif DVT08_008675 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor DVT08_008680 PF03641 Possible lysine decarboxylase DVT08_008680 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DVT08_008680 PF11892 Domain of unknown function (DUF3412) DVT08_008685 PF00563 EAL domain DVT08_008685 PF12792 CSS motif domain associated with EAL DVT08_008690 PF00899 ThiF family DVT08_008695 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DVT08_008695 PF01926 50S ribosome-binding GTPase DVT08_008700 PF01011 PQQ enzyme repeat DVT08_008700 PF13360 PQQ-like domain DVT08_008720 PF04055 Radical SAM superfamily DVT08_008725 PF00334 Nucleoside diphosphate kinase DVT08_008730 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DVT08_008730 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DVT08_008735 PF00709 Adenylosuccinate synthetase DVT08_008745 PF01145 SPFH domain / Band 7 family DVT08_008750 PF01145 SPFH domain / Band 7 family DVT08_008750 PF12221 Bacterial membrane protein N terminal DVT08_008755 PF08240 Alcohol dehydrogenase GroES-like domain DVT08_008755 PF00107 Zinc-binding dehydrogenase DVT08_008760 PF00072 Response regulator receiver domain DVT08_008775 PF03129 Anticodon binding domain DVT08_008775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DVT08_008775 PF04073 Aminoacyl-tRNA editing domain DVT08_008785 PF01066 CDP-alcohol phosphatidyltransferase DVT08_008800 PF00933 Glycosyl hydrolase family 3 N terminal domain DVT08_008800 PF14310 Fibronectin type III-like domain DVT08_008800 PF01915 Glycosyl hydrolase family 3 C-terminal domain DVT08_008805 PF00924 Mechanosensitive ion channel DVT08_008810 PF02152 Dihydroneopterin aldolase DVT08_008815 PF00814 Glycoprotease family DVT08_008820 PF01165 Ribosomal protein S21 DVT08_008825 PF09424 Yqey-like protein DVT08_008830 PF03631 Virulence factor BrkB DVT08_008835 PF01807 CHC2 zinc finger DVT08_008835 PF08278 DNA primase DnaG DnaB-binding DVT08_008835 PF10410 DnaB-helicase binding domain of primase DVT08_008835 PF08275 DNA primase catalytic core, N-terminal domain DVT08_008845 PF01555 DNA methylase DVT08_008850 PF00579 tRNA synthetases class I (W and Y) DVT08_008860 PF13538 UvrD-like helicase C-terminal domain DVT08_008870 PF13361 UvrD-like helicase C-terminal domain DVT08_008870 PF00580 UvrD/REP helicase N-terminal domain DVT08_008870 PF12705 PD-(D/E)XK nuclease superfamily DVT08_008880 PF00005 ABC transporter DVT08_008885 PF02405 Permease MlaE DVT08_008895 PF05494 MlaC protein DVT08_008905 PF04333 MlaA lipoprotein DVT08_008915 PF02646 RmuC family DVT08_008920 PF00005 ABC transporter DVT08_008930 PF13520 Amino acid permease DVT08_008935 PF10672 S-adenosylmethionine-dependent methyltransferase DVT08_008935 PF17785 PUA-like domain DVT08_008940 PF03741 Integral membrane protein TerC family DVT08_008945 PF01521 Iron-sulphur cluster biosynthesis DVT08_008965 PF00072 Response regulator receiver domain DVT08_008965 PF00486 Transcriptional regulatory protein, C terminal DVT08_008975 PF00210 Ferritin-like domain DVT08_008985 PF00293 NUDIX domain DVT08_009000 PF02773 S-adenosylmethionine synthetase, C-terminal domain DVT08_009000 PF02772 S-adenosylmethionine synthetase, central domain DVT08_009000 PF00438 S-adenosylmethionine synthetase, N-terminal domain DVT08_009005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_009010 PF00486 Transcriptional regulatory protein, C terminal DVT08_009010 PF00072 Response regulator receiver domain DVT08_009020 PF01207 Dihydrouridine synthase (Dus) DVT08_009030 PF07715 TonB-dependent Receptor Plug Domain DVT08_009030 PF00593 TonB dependent receptor DVT08_009045 PF00004 ATPase family associated with various cellular activities (AAA) DVT08_009045 PF07724 AAA domain (Cdc48 subfamily) DVT08_009045 PF02861 Clp amino terminal domain, pathogenicity island component DVT08_009045 PF10431 C-terminal, D2-small domain, of ClpB protein DVT08_009045 PF17871 AAA lid domain DVT08_009050 PF00301 Rubredoxin DVT08_009055 PF02581 Thiamine monophosphate synthase DVT08_009060 PF00067 Cytochrome P450 DVT08_009065 PF00884 Sulfatase DVT08_009065 PF08019 Phosphoethanolamine transferase EptA/EptB DVT08_009075 PF07660 Secretin and TonB N terminus short domain DVT08_009075 PF11741 AMIN domain DVT08_009075 PF00263 Bacterial type II and III secretion system protein DVT08_009075 PF03958 Bacterial type II/III secretion system short domain DVT08_009080 PF04351 Pilus assembly protein, PilP DVT08_009085 PF04350 Pilus assembly protein, PilO DVT08_009090 PF05137 Fimbrial assembly protein (PilN) DVT08_009095 PF11104 Type IV pilus assembly protein PilM; DVT08_009100 PF17092 Penicillin-binding protein OB-like domain DVT08_009100 PF00912 Transglycosylase DVT08_009100 PF00905 Penicillin binding protein transpeptidase domain DVT08_009105 PF00248 Aldo/keto reductase family DVT08_009110 PF00294 pfkB family carbohydrate kinase DVT08_009115 PF00691 OmpA family DVT08_009115 PF05736 OprF membrane domain DVT08_009120 PF03796 DnaB-like helicase C terminal domain DVT08_009120 PF00772 DnaB-like helicase N terminal domain DVT08_009130 PF00067 Cytochrome P450 DVT08_009135 PF00271 Helicase conserved C-terminal domain DVT08_009135 PF17191 RecG wedge domain DVT08_009135 PF00270 DEAD/DEAH box helicase DVT08_009140 PF01042 Endoribonuclease L-PSP DVT08_009145 PF13291 ACT domain DVT08_009145 PF02824 TGS domain DVT08_009145 PF04607 Region found in RelA / SpoT proteins DVT08_009150 PF02913 FAD linked oxidases, C-terminal domain DVT08_009150 PF01565 FAD binding domain DVT08_009155 PF05736 OprF membrane domain DVT08_009155 PF00691 OmpA family DVT08_009160 PF02600 Disulfide bond formation protein DsbB DVT08_009165 PF00593 TonB dependent receptor DVT08_009165 PF07715 TonB-dependent Receptor Plug Domain DVT08_009170 PF02590 Predicted SPOUT methyltransferase DVT08_009255 PF05973 Phage derived protein Gp49-like (DUF891) DVT08_009260 PF01381 Helix-turn-helix DVT08_009305 PF10876 Phage tail assemb.y chaperone protein, TAC DVT08_009360 PF04233 Phage Mu protein F like protein DVT08_009365 PF06381 Protein of unknown function (DUF1073) DVT08_009395 PF00959 Phage lysozyme DVT08_009410 PF03796 DnaB-like helicase C terminal domain DVT08_009410 PF00772 DnaB-like helicase N terminal domain DVT08_009425 PF02498 BRO family, N-terminal domain DVT08_009425 PF10548 P22AR C-terminal domain DVT08_009450 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT DVT08_009535 PF02498 BRO family, N-terminal domain DVT08_009535 PF10548 P22AR C-terminal domain DVT08_009580 PF00271 Helicase conserved C-terminal domain DVT08_009580 PF02151 UvrB/uvrC motif DVT08_009580 PF04851 Type III restriction enzyme, res subunit DVT08_009580 PF17757 UvrB interaction domain DVT08_009580 PF12344 Ultra-violet resistance protein B DVT08_009595 PF00701 Dihydrodipicolinate synthetase family DVT08_009605 PF00578 AhpC/TSA family DVT08_009625 PF00586 AIR synthase related protein, N-terminal domain DVT08_009625 PF02769 AIR synthase related protein, C-terminal domain DVT08_009630 PF01029 NusB family DVT08_009635 PF00885 6,7-dimethyl-8-ribityllumazine synthase DVT08_009640 PF00925 GTP cyclohydrolase II DVT08_009640 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DVT08_009645 PF00677 Lumazine binding domain DVT08_009655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DVT08_009655 PF01872 RibD C-terminal domain DVT08_009660 PF03477 ATP cone domain DVT08_009670 PF00464 Serine hydroxymethyltransferase DVT08_009675 PF12848 ABC transporter DVT08_009675 PF00005 ABC transporter DVT08_009680 PF06039 Malate:quinone oxidoreductase (Mqo) DVT08_009685 PF04134 Protein of unknown function, DUF393 DVT08_009695 PF02578 Multi-copper polyphenol oxidoreductase laccase DVT08_009700 PF00849 RNA pseudouridylate synthase DVT08_009700 PF01479 S4 domain DVT08_009705 PF13525 Outer membrane lipoprotein DVT08_009715 PF07664 Ferrous iron transport protein B C terminus DVT08_009715 PF02421 Ferrous iron transport protein B DVT08_009715 PF07670 Nucleoside recognition DVT08_009725 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DVT08_009730 PF01189 16S rRNA methyltransferase RsmB/F DVT08_009730 PF01029 NusB family DVT08_009735 PF00551 Formyl transferase DVT08_009735 PF02911 Formyl transferase, C-terminal domain DVT08_009740 PF01327 Polypeptide deformylase DVT08_009750 PF17782 DprA winged helix domain DVT08_009750 PF02481 DNA recombination-mediator protein A DVT08_009755 PF04361 Protein of unknown function (DUF494) DVT08_009760 PF01131 DNA topoisomerase DVT08_009760 PF01751 Toprim domain DVT08_009760 PF13368 Topoisomerase C-terminal repeat DVT08_009765 PF01300 Telomere recombination DVT08_009795 PF04386 Stringent starvation protein B DVT08_009800 PF02798 Glutathione S-transferase, N-terminal domain DVT08_009800 PF00043 Glutathione S-transferase, C-terminal domain DVT08_009805 PF02167 Cytochrome C1 family DVT08_009810 PF00032 Cytochrome b(C-terminal)/b6/petD DVT08_009810 PF00033 Cytochrome b/b6/petB DVT08_009815 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DVT08_009815 PF00355 Rieske [2Fe-2S] domain DVT08_009820 PF01464 Transglycosylase SLT domain DVT08_009825 PF00919 Uncharacterized protein family UPF0004 DVT08_009825 PF01938 TRAM domain DVT08_009825 PF04055 Radical SAM superfamily DVT08_009830 PF02562 PhoH-like protein DVT08_009835 PF02130 Uncharacterized protein family UPF0054 DVT08_009845 PF03471 Transporter associated domain DVT08_009845 PF00571 CBS domain DVT08_009855 PF01544 CorA-like Mg2+ transporter protein DVT08_009880 PF13018 Extended Signal Peptide of Type V secretion system DVT08_009880 PF05860 haemagglutination activity domain DVT08_009880 PF04829 Pre-toxin domain with VENN motif DVT08_009880 PF13332 Hemagglutinin repeat DVT08_009900 PF00912 Transglycosylase DVT08_009900 PF14814 Bifunctional transglycosylase second domain DVT08_009900 PF00905 Penicillin binding protein transpeptidase domain DVT08_009910 PF13307 Helicase C-terminal domain DVT08_009910 PF04851 Type III restriction enzyme, res subunit DVT08_009925 PF00484 Carbonic anhydrase DVT08_009935 PF01522 Polysaccharide deacetylase DVT08_009945 PF00005 ABC transporter DVT08_009945 PF09383 NIL domain DVT08_009950 PF00528 Binding-protein-dependent transport system inner membrane component DVT08_009955 PF03180 NLPA lipoprotein DVT08_009970 PF02817 e3 binding domain DVT08_009970 PF00364 Biotin-requiring enzyme DVT08_009970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DVT08_009975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DVT08_009975 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVT08_009985 PF01545 Cation efflux family DVT08_009990 PF01053 Cys/Met metabolism PLP-dependent enzyme DVT08_009995 PF00561 alpha/beta hydrolase fold DVT08_010000 PF01551 Peptidase family M23 DVT08_010010 PF01975 Survival protein SurE DVT08_010020 PF09335 SNARE associated Golgi protein DVT08_010025 PF01476 LysM domain DVT08_010025 PF01551 Peptidase family M23 DVT08_010035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_010035 PF16736 Single Cache-like DVT08_010035 PF00512 His Kinase A (phospho-acceptor) domain DVT08_010035 PF00989 PAS fold DVT08_010040 PF00842 Alanine racemase, C-terminal domain DVT08_010040 PF01168 Alanine racemase, N-terminal domain DVT08_010045 PF01266 FAD dependent oxidoreductase DVT08_010050 PF01641 SelR domain DVT08_010055 PF01476 LysM domain DVT08_010055 PF00704 Glycosyl hydrolases family 18 DVT08_010060 PF07691 PA14 domain DVT08_010060 PF02838 Glycosyl hydrolase family 20, domain 2 DVT08_010060 PF00728 Glycosyl hydrolase family 20, catalytic domain DVT08_010070 PF01915 Glycosyl hydrolase family 3 C-terminal domain DVT08_010070 PF07691 PA14 domain DVT08_010070 PF00933 Glycosyl hydrolase family 3 N terminal domain DVT08_010070 PF14310 Fibronectin type III-like domain DVT08_010085 PF17678 Glycosyl hydrolase family 92 N-terminal domain DVT08_010085 PF07971 Glycosyl hydrolase family 92 DVT08_010090 PF01301 Glycosyl hydrolases family 35 DVT08_010095 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DVT08_010100 PF00639 PPIC-type PPIASE domain DVT08_010100 PF09312 SurA N-terminal domain DVT08_010105 PF04453 LPS transport system D DVT08_010105 PF03968 OstA-like protein DVT08_010115 PF01494 FAD binding domain DVT08_010120 PF01494 FAD binding domain DVT08_010130 PF03466 LysR substrate binding domain DVT08_010130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DVT08_010135 PF10414 Sirohaem synthase dimerisation region DVT08_010135 PF14824 Sirohaem biosynthesis protein central DVT08_010135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DVT08_010140 PF00291 Pyridoxal-phosphate dependent enzyme DVT08_010165 PF00274 Fructose-bisphosphate aldolase class-I DVT08_010170 PF00224 Pyruvate kinase, barrel domain DVT08_010170 PF02887 Pyruvate kinase, alpha/beta domain DVT08_010180 PF00162 Phosphoglycerate kinase DVT08_010185 PF00749 tRNA synthetases class I (E and Q), catalytic domain DVT08_010190 PF01475 Ferric uptake regulator family DVT08_010200 PF00553 Cellulose binding domain DVT08_010200 PF00150 Cellulase (glycosyl hydrolase family 5) DVT08_010210 PF00675 Insulinase (Peptidase family M16) DVT08_010210 PF05193 Peptidase M16 inactive domain DVT08_010225 PF03330 Lytic transglycolase DVT08_010230 PF01043 SecA preprotein cross-linking domain DVT08_010230 PF02810 SEC-C motif DVT08_010230 PF07516 SecA Wing and Scaffold domain DVT08_010230 PF07517 SecA DEAD-like domain DVT08_010235 PF08525 Opacity-associated protein A N-terminal motif DVT08_010235 PF01551 Peptidase family M23 DVT08_010235 PF01476 LysM domain DVT08_010245 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DVT08_010250 PF00091 Tubulin/FtsZ family, GTPase domain DVT08_010250 PF12327 FtsZ family, C-terminal domain DVT08_010255 PF02491 SHS2 domain inserted in FTSA DVT08_010265 PF01820 D-ala D-ala ligase N-terminus DVT08_010265 PF07478 D-ala D-ala ligase C-terminus DVT08_010270 PF01225 Mur ligase family, catalytic domain DVT08_010270 PF02875 Mur ligase family, glutamate ligase domain DVT08_010270 PF08245 Mur ligase middle domain DVT08_010275 PF03033 Glycosyltransferase family 28 N-terminal domain DVT08_010275 PF04101 Glycosyltransferase family 28 C-terminal domain DVT08_010280 PF01098 Cell cycle protein DVT08_010285 PF00953 Glycosyl transferase family 4 DVT08_010290 PF02875 Mur ligase family, glutamate ligase domain DVT08_010290 PF01225 Mur ligase family, catalytic domain DVT08_010290 PF08245 Mur ligase middle domain DVT08_010295 PF01225 Mur ligase family, catalytic domain DVT08_010295 PF08245 Mur ligase middle domain DVT08_010295 PF02875 Mur ligase family, glutamate ligase domain DVT08_010300 PF03717 Penicillin-binding Protein dimerisation domain DVT08_010300 PF00905 Penicillin binding protein transpeptidase domain DVT08_010305 PF04999 Cell division protein FtsL DVT08_010310 PF01795 MraW methylase family DVT08_010315 PF02381 MraZ protein, putative antitoxin-like DVT08_010325 PF03600 Citrate transporter DVT08_010325 PF02080 TrkA-C domain DVT08_010330 PF02390 Putative methyltransferase DVT08_010335 PF05690 Thiazole biosynthesis protein ThiG DVT08_010340 PF02597 ThiS family DVT08_010340 PF05690 Thiazole biosynthesis protein ThiG DVT08_010380 PF07977 FabA-like domain DVT08_010415 PF04143 Sulphur transport DVT08_010425 PF01925 Sulfite exporter TauE/SafE DVT08_010430 PF00692 dUTPase DVT08_010440 PF01119 DNA mismatch repair protein, C-terminal domain DVT08_010440 PF08676 MutL C terminal dimerisation domain DVT08_010445 PF01520 N-acetylmuramoyl-L-alanine amidase DVT08_010445 PF11741 AMIN domain DVT08_010450 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DVT08_010455 PF03853 YjeF-related protein N-terminus DVT08_010455 PF01256 Carbohydrate kinase DVT08_010460 PF02601 Exonuclease VII, large subunit DVT08_010460 PF13742 OB-fold nucleic acid binding domain DVT08_010475 PF01612 3'-5' exonuclease DVT08_010475 PF00570 HRDC domain DVT08_010485 PF01728 FtsJ-like methyltransferase DVT08_010485 PF18125 RlmM ferredoxin-like domain DVT08_010505 PF00216 Bacterial DNA-binding protein DVT08_010510 PF01588 Putative tRNA binding domain DVT08_010510 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DVT08_010510 PF03484 tRNA synthetase B5 domain DVT08_010510 PF03483 B3/4 domain DVT08_010510 PF03147 Ferredoxin-fold anticodon binding domain DVT08_010515 PF01409 tRNA synthetases class II core domain (F) DVT08_010515 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DVT08_010520 PF00453 Ribosomal protein L20 DVT08_010525 PF01632 Ribosomal protein L35 DVT08_010530 PF05198 Translation initiation factor IF-3, N-terminal domain DVT08_010530 PF00707 Translation initiation factor IF-3, C-terminal domain DVT08_010535 PF02824 TGS domain DVT08_010535 PF03129 Anticodon binding domain DVT08_010535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DVT08_010535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DVT08_010550 PF08443 RimK-like ATP-grasp domain DVT08_010550 PF18030 RimK PreATP-grasp domain DVT08_010555 PF00072 Response regulator receiver domain DVT08_010555 PF00486 Transcriptional regulatory protein, C terminal DVT08_010560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_010560 PF00672 HAMP domain DVT08_010560 PF00512 His Kinase A (phospho-acceptor) domain DVT08_010565 PF01121 Dephospho-CoA kinase DVT08_010570 PF01478 Type IV leader peptidase family DVT08_010570 PF06750 Bacterial Peptidase A24 N-terminal domain DVT08_010575 PF00482 Type II secretion system (T2SS), protein F DVT08_010580 PF07963 Prokaryotic N-terminal methylation motif DVT08_010580 PF00114 Pilin (bacterial filament) DVT08_010590 PF07963 Prokaryotic N-terminal methylation motif DVT08_010590 PF00114 Pilin (bacterial filament) DVT08_010595 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DVT08_010595 PF00437 Type II/IV secretion system protein DVT08_010600 PF00158 Sigma-54 interaction domain DVT08_010600 PF00072 Response regulator receiver domain DVT08_010600 PF02954 Bacterial regulatory protein, Fis family DVT08_010605 PF00512 His Kinase A (phospho-acceptor) domain DVT08_010605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_010610 PF00549 CoA-ligase DVT08_010610 PF08442 ATP-grasp domain DVT08_010615 PF00549 CoA-ligase DVT08_010615 PF02629 CoA binding domain DVT08_010625 PF17287 POTRA domain DVT08_010625 PF08479 POTRA domain, ShlB-type DVT08_010625 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DVT08_010635 PF03989 DNA gyrase C-terminal domain, beta-propeller DVT08_010635 PF00521 DNA gyrase/topoisomerase IV, subunit A DVT08_010640 PF01008 Initiation factor 2 subunit family DVT08_010650 PF00152 tRNA synthetases class II (D, K and N) DVT08_010660 PF12826 Helix-hairpin-helix motif DVT08_010660 PF00533 BRCA1 C Terminus (BRCT) domain DVT08_010660 PF01653 NAD-dependent DNA ligase adenylation domain DVT08_010660 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DVT08_010660 PF03120 NAD-dependent DNA ligase OB-fold domain DVT08_010665 PF04354 ZipA, C-terminal FtsZ-binding domain DVT08_010670 PF02463 RecF/RecN/SMC N terminal domain DVT08_010675 PF03948 Ribosomal protein L9, C-terminal domain DVT08_010675 PF01281 Ribosomal protein L9, N-terminal domain DVT08_010680 PF01084 Ribosomal protein S18 DVT08_010685 PF01250 Ribosomal protein S6 DVT08_010690 PF01521 Iron-sulphur cluster biosynthesis DVT08_010695 PF00152 tRNA synthetases class II (D, K and N) DVT08_010695 PF01336 OB-fold nucleic acid binding domain DVT08_010700 PF01061 ABC-2 type transporter DVT08_010705 PF00005 ABC transporter DVT08_010715 PF01180 Dihydroorotate dehydrogenase DVT08_010720 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DVT08_010720 PF01565 FAD binding domain DVT08_010725 PF00892 EamA-like transporter family DVT08_010730 PF01569 PAP2 superfamily DVT08_010735 PF04551 GcpE protein DVT08_010745 PF00072 Response regulator receiver domain DVT08_010750 PF00889 Elongation factor TS DVT08_010755 PF00318 Ribosomal protein S2 DVT08_010765 PF00664 ABC transporter transmembrane region DVT08_010765 PF00005 ABC transporter DVT08_010780 PF02321 Outer membrane efflux protein DVT08_010785 PF00149 Calcineurin-like phosphoesterase DVT08_010795 PF02541 Ppx/GppA phosphatase family DVT08_010800 PF02503 Polyphosphate kinase middle domain DVT08_010800 PF13090 Polyphosphate kinase C-terminal domain 2 DVT08_010800 PF17941 Polyphosphate kinase C-terminal domain 1 DVT08_010800 PF13089 Polyphosphate kinase N-terminal domain DVT08_010805 PF11808 Phosphate regulon sensor protein PhoR DVT08_010805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DVT08_010805 PF00512 His Kinase A (phospho-acceptor) domain DVT08_010805 PF00989 PAS fold DVT08_010810 PF00072 Response regulator receiver domain DVT08_010810 PF00486 Transcriptional regulatory protein, C terminal DVT08_010815 PF13181 Tetratricopeptide repeat DVT08_010815 PF01435 Peptidase family M48 DVT08_010820 PF00462 Glutaredoxin DVT08_010825 PF00180 Isocitrate/isopropylmalate dehydrogenase DVT08_010825 PF18324 Hypothetical protein TT1725 DVT08_010835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DVT08_010835 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DVT08_010840 PF11893 Domain of unknown function (DUF3413) DVT08_010840 PF00884 Sulfatase DVT08_010845 PF11953 Domain of unknown function (DUF3470) DVT08_010845 PF00037 4Fe-4S binding domain DVT08_010855 PF01106 NifU-like domain DVT08_010860 PF01329 Pterin 4 alpha carbinolamine dehydratase DVT08_010870 PF00849 RNA pseudouridylate synthase DVT08_010870 PF01479 S4 domain DVT08_010875 PF00575 S1 RNA binding domain DVT08_010875 PF10150 Ribonuclease E/G family DVT08_010875 PF12111 Polyribonucleotide phosphorylase C terminal DVT08_010880 PF00196 Bacterial regulatory proteins, luxR family DVT08_010880 PF00072 Response regulator receiver domain DVT08_010885 PF17773 UPF0176 acylphosphatase like domain DVT08_010895 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DVT08_010895 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DVT08_010900 PF00545 ribonuclease DVT08_010910 PF12848 ABC transporter DVT08_010910 PF00005 ABC transporter DVT08_010910 PF16326 ABC transporter C-terminal domain DVT08_010920 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DVT08_010925 PF00313 'Cold-shock' DNA-binding domain DVT08_010930 PF00990 Diguanylate cyclase, GGDEF domain DVT08_010930 PF00563 EAL domain DVT08_010930 PF01590 GAF domain DVT08_010930 PF00360 Phytochrome region DVT08_010935 PF01435 Peptidase family M48 DVT08_010940 PF03144 Elongation factor Tu domain 2 DVT08_010940 PF03143 Elongation factor Tu C-terminal domain DVT08_010940 PF00009 Elongation factor Tu GTP binding domain DVT08_010945 PF14492 Elongation Factor G, domain II DVT08_010945 PF00679 Elongation factor G C-terminus DVT08_010945 PF00009 Elongation factor Tu GTP binding domain DVT08_010945 PF03144 Elongation factor Tu domain 2 DVT08_010945 PF03764 Elongation factor G, domain IV DVT08_010950 PF00177 Ribosomal protein S7p/S5e DVT08_010955 PF00164 Ribosomal protein S12/S23 DVT08_010960 PF00623 RNA polymerase Rpb1, domain 2 DVT08_010960 PF04998 RNA polymerase Rpb1, domain 5 DVT08_010960 PF05000 RNA polymerase Rpb1, domain 4 DVT08_010960 PF04983 RNA polymerase Rpb1, domain 3 DVT08_010960 PF04997 RNA polymerase Rpb1, domain 1 DVT08_010965 PF10385 RNA polymerase beta subunit external 1 domain DVT08_010965 PF04560 RNA polymerase Rpb2, domain 7 DVT08_010965 PF04565 RNA polymerase Rpb2, domain 3 DVT08_010965 PF00562 RNA polymerase Rpb2, domain 6 DVT08_010965 PF04563 RNA polymerase beta subunit DVT08_010965 PF04561 RNA polymerase Rpb2, domain 2 DVT08_010970 PF00542 Ribosomal protein L7/L12 C-terminal domain DVT08_010970 PF16320 Ribosomal protein L7/L12 dimerisation domain DVT08_010975 PF00466 Ribosomal protein L10 DVT08_010980 PF00687 Ribosomal protein L1p/L10e family DVT08_010985 PF03946 Ribosomal protein L11, N-terminal domain DVT08_010985 PF00298 Ribosomal protein L11, RNA binding domain DVT08_010990 PF00467 KOW motif DVT08_010990 PF02357 Transcription termination factor nusG DVT08_010995 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DVT08_011005 PF03143 Elongation factor Tu C-terminal domain DVT08_011005 PF03144 Elongation factor Tu domain 2 DVT08_011005 PF00009 Elongation factor Tu GTP binding domain DVT08_011025 PF01926 50S ribosome-binding GTPase DVT08_011025 PF06071 Protein of unknown function (DUF933) DVT08_011030 PF01195 Peptidyl-tRNA hydrolase DVT08_011035 PF01386 Ribosomal L25p family DVT08_011035 PF14693 Ribosomal protein TL5, C-terminal domain DVT08_011040 PF14572 Phosphoribosyl synthetase-associated domain DVT08_011040 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DVT08_011050 PF08544 GHMP kinases C terminal DVT08_011050 PF00288 GHMP kinases N terminal domain DVT08_011055 PF03550 Outer membrane lipoprotein LolB DVT08_011065 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DVT08_011065 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DVT08_011065 PF01488 Shikimate / quinate 5-dehydrogenase DVT08_011070 PF03462 PCRF domain DVT08_011070 PF00472 RF-1 domain DVT08_011080 PF10672 S-adenosylmethionine-dependent methyltransferase DVT08_011080 PF02926 THUMP domain DVT08_011080 PF01170 Putative RNA methylase family UPF0020 DVT08_011115 PF01914 MarC family integral membrane protein DVT08_011120 PF00462 Glutaredoxin DVT08_011125 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DVT08_011125 PF02222 ATP-grasp domain DVT08_011130 PF00731 AIR carboxylase DVT08_011150 PF07731 Multicopper oxidase DVT08_011150 PF07732 Multicopper oxidase DVT08_011160 PF00580 UvrD/REP helicase N-terminal domain DVT08_011160 PF13361 UvrD-like helicase C-terminal domain DVT08_011165 PF04349 Periplasmic glucan biosynthesis protein, MdoG DVT08_011170 PF01343 Peptidase family S49 DVT08_011175 PF01554 MatE DVT08_011190 PF18074 Primosomal protein N C-terminal domain DVT08_011190 PF17764 3′ DNA-binding domain (3′BD) DVT08_011190 PF00271 Helicase conserved C-terminal domain DVT08_011190 PF00270 DEAD/DEAH box helicase DVT08_011190 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DVT08_011195 PF04542 Sigma-70 region 2 DVT08_011195 PF04545 Sigma-70, region 4 DVT08_011200 PF03167 Uracil DNA glycosylase superfamily DVT08_011205 PF00072 Response regulator receiver domain DVT08_011205 PF01339 CheB methylesterase DVT08_011210 PF18075 FtsX extracellular domain DVT08_011215 PF00005 ABC transporter DVT08_011220 PF12300 ATP-dependent RNA helicase RhlB DVT08_011220 PF00271 Helicase conserved C-terminal domain DVT08_011220 PF00270 DEAD/DEAH box helicase DVT08_011225 PF00085 Thioredoxin DVT08_011230 PF07497 Rho termination factor, RNA-binding domain DVT08_011230 PF07498 Rho termination factor, N-terminal domain DVT08_011230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DVT08_011235 PF03971 Monomeric isocitrate dehydrogenase DVT08_011245 PF03572 Peptidase family S41 DVT08_011245 PF13180 PDZ domain DVT08_011250 PF01551 Peptidase family M23 DVT08_011265 PF00150 Cellulase (glycosyl hydrolase family 5) DVT08_011270 PF07992 Pyridine nucleotide-disulphide oxidoreductase DVT08_011270 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DVT08_011275 PF00310 Glutamine amidotransferases class-II DVT08_011275 PF01493 GXGXG motif DVT08_011275 PF04898 Glutamate synthase central domain DVT08_011275 PF01645 Conserved region in glutamate synthase DVT08_011280 PF14748 Pyrroline-5-carboxylate reductase dimerisation DVT08_011280 PF03807 NADP oxidoreductase coenzyme F420-dependent DVT08_011320 PF11867 Domain of unknown function (DUF3387) DVT08_011320 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DVT08_011320 PF18766 SWI2/SNF2 ATPase DVT08_011330 PF02384 N-6 DNA Methylase DVT08_011330 PF12161 HsdM N-terminal domain DVT08_011340 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DVT08_011340 PF12008 Type I restriction and modification enzyme - subunit R C terminal DVT08_011340 PF18766 SWI2/SNF2 ATPase DVT08_011345 PF01420 Type I restriction modification DNA specificity domain DVT08_011355 PF12161 HsdM N-terminal domain DVT08_011355 PF02384 N-6 DNA Methylase DVT08_011360 PF01810 LysE type translocator DVT08_011375 PF11855 Protein of unknown function (DUF3375) DVT08_011410 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DVT08_011410 PF11867 Domain of unknown function (DUF3387) DVT08_011410 PF18766 SWI2/SNF2 ATPase DVT08_011425 PF02384 N-6 DNA Methylase DVT08_011500 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DVT08_011500 PF06594 Haemolysin-type calcium binding protein related domain DVT08_011545 PF01850 PIN domain DVT08_011615 PF01926 50S ribosome-binding GTPase DVT08_011615 PF12631 MnmE helical domain DVT08_011615 PF10396 GTP-binding protein TrmE N-terminus DVT08_011625 PF14849 YidC periplasmic domain DVT08_011625 PF02096 60Kd inner membrane protein DVT08_011630 PF00825 Ribonuclease P DVT08_011635 PF00468 Ribosomal protein L34