locus-tag	class	description
HKJ32_00005	PF08299	Bacterial dnaA protein helix-turn-helix
HKJ32_00005	PF00308	Bacterial dnaA  protein
HKJ32_00005	PF11638	DnaA N-terminal domain
HKJ32_00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
HKJ32_00010	PF02767	DNA polymerase III beta subunit, central domain
HKJ32_00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
HKJ32_00015	PF02463	RecF/RecN/SMC N terminal domain
HKJ32_00020	PF18053	DNA gyrase B subunit insert domain
HKJ32_00020	PF00204	DNA gyrase B
HKJ32_00020	PF00986	DNA gyrase B subunit, carboxyl terminus
HKJ32_00020	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_00020	PF01751	Toprim domain
HKJ32_00030	PF01435	Peptidase family M48
HKJ32_00040	PF03544	Gram-negative bacterial TonB protein C-terminal
HKJ32_00045	PF01618	MotA/TolQ/ExbB proton channel family
HKJ32_00050	PF02472	Biopolymer transport protein ExbD/TolR
HKJ32_00055	PF02472	Biopolymer transport protein ExbD/TolR
HKJ32_00070	PF01218	Coproporphyrinogen III oxidase
HKJ32_00085	PF00793	DAHP synthetase I family
HKJ32_00110	PF05567	Neisseria PilC beta-propeller domain
HKJ32_00120	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
HKJ32_00125	PF00155	Aminotransferase class I and II
HKJ32_00130	PF01741	Large-conductance mechanosensitive channel, MscL
HKJ32_00150	PF04378	Ribosomal RNA large subunit methyltransferase D, RlmJ
HKJ32_00160	PF00271	Helicase conserved C-terminal domain
HKJ32_00160	PF02559	CarD-like/TRCF domain
HKJ32_00160	PF00270	DEAD/DEAH box helicase
HKJ32_00160	PF03461	TRCF domain
HKJ32_00160	PF17757	UvrB interaction domain
HKJ32_00165	PF01220	Dehydroquinase class II
HKJ32_00170	PF00364	Biotin-requiring enzyme
HKJ32_00175	PF00289	Biotin carboxylase, N-terminal domain
HKJ32_00175	PF02785	Biotin carboxylase C-terminal domain
HKJ32_00175	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
HKJ32_00180	PF13361	UvrD-like helicase C-terminal domain
HKJ32_00180	PF00580	UvrD/REP helicase N-terminal domain
HKJ32_00185	PF00042	Globin
HKJ32_00185	PF00970	Oxidoreductase FAD-binding domain
HKJ32_00185	PF00175	Oxidoreductase NAD-binding domain 
HKJ32_00195	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
HKJ32_00200	PF08535	KorB domain
HKJ32_00200	PF06613	KorB C-terminal beta-barrel domain
HKJ32_00200	PF02195	ParB-like nuclease domain
HKJ32_00205	PF00156	Phosphoribosyl transferase domain
HKJ32_00210	PF04055	Radical SAM superfamily
HKJ32_00210	PF06968	Biotin and Thiamin Synthesis associated domain
HKJ32_00215	PF01734	Patatin-like phospholipase
HKJ32_00220	PF01040	UbiA prenyltransferase family
HKJ32_00255	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
HKJ32_00255	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
HKJ32_00265	PF00448	SRP54-type protein, GTPase domain
HKJ32_00265	PF02978	Signal peptide binding domain
HKJ32_00265	PF02881	SRP54-type protein, helical bundle domain
HKJ32_00280	PF00419	Fimbrial protein
HKJ32_00285	PF13953	PapC C-terminal domain
HKJ32_00285	PF13954	PapC N-terminal domain
HKJ32_00285	PF00577	Outer membrane usher protein
HKJ32_00290	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
HKJ32_00290	PF02753	Pili assembly chaperone PapD, C-terminal domain
HKJ32_00295	PF16970	Type-1 fimbrial protein, A
HKJ32_00300	PF02464	Competence-damaged protein
HKJ32_00305	PF00083	Sugar (and other) transporter
HKJ32_00310	PF13167	GTP-binding GTPase N-terminal
HKJ32_00310	PF01926	50S ribosome-binding GTPase
HKJ32_00310	PF16360	GTP-binding GTPase Middle Region
HKJ32_00315	PF17209	Hfq protein
HKJ32_00325	PF00809	Pterin binding enzyme
HKJ32_00335	PF17862	AAA+ lid domain
HKJ32_00335	PF00004	ATPase family associated with various cellular activities (AAA)
HKJ32_00335	PF06480	FtsH Extracellular
HKJ32_00335	PF01434	Peptidase family M41
HKJ32_00340	PF01728	FtsJ-like methyltransferase
HKJ32_00345	PF01985	CRS1 / YhbY (CRM) domain
HKJ32_00355	PF00920	Dehydratase family
HKJ32_00375	PF03279	Bacterial lipid A biosynthesis acyltransferase
HKJ32_00380	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
HKJ32_00390	PF00886	Ribosomal protein S16
HKJ32_00395	PF05239	PRC-barrel domain
HKJ32_00395	PF01782	RimM N-terminal domain
HKJ32_00400	PF01746	tRNA (Guanine-1)-methyltransferase
HKJ32_00405	PF01245	Ribosomal protein L19
HKJ32_00410	PF00557	Metallopeptidase family M24
HKJ32_00415	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
HKJ32_00415	PF14602	Hexapeptide repeat of succinyl-transferase
HKJ32_00415	PF00132	Bacterial transferase hexapeptide (six repeats)
HKJ32_00420	PF03960	ArsC family
HKJ32_00425	PF01546	Peptidase family M20/M25/M40
HKJ32_00425	PF07687	Peptidase dimerisation domain
HKJ32_00430	PF00733	Asparagine synthase
HKJ32_00430	PF13537	Glutamine amidotransferase domain
HKJ32_00440	PF03060	Nitronate monooxygenase
HKJ32_00445	PF01726	LexA DNA binding domain
HKJ32_00445	PF00717	Peptidase S24-like
HKJ32_00450	PF00154	recA bacterial DNA recombination protein
HKJ32_00455	PF02272	DHHA1 domain
HKJ32_00455	PF01411	tRNA synthetases class II (A)
HKJ32_00455	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
HKJ32_00460	PF02599	Global regulator protein family
HKJ32_00470	PF01432	Peptidase family M3
HKJ32_00485	PF00394	Multicopper oxidase
HKJ32_00485	PF07731	Multicopper oxidase
HKJ32_00485	PF07732	Multicopper oxidase
HKJ32_00490	PF05275	Copper resistance protein B precursor (CopB)
HKJ32_00495	PF10458	Valyl tRNA synthetase tRNA binding arm
HKJ32_00495	PF00133	tRNA synthetases class I (I, L, M and V)
HKJ32_00495	PF08264	Anticodon-binding domain of tRNA
HKJ32_00515	PF00883	Cytosol aminopeptidase family, catalytic domain
HKJ32_00515	PF02789	Cytosol aminopeptidase family, N-terminal domain
HKJ32_00535	PF01380	SIS domain
HKJ32_00545	PF17284	Spermidine synthase tetramerisation domain
HKJ32_00550	PF17944	Arginine decarboxylase C-terminal helical extension
HKJ32_00550	PF17810	Arginine decarboxylase helical bundle domain
HKJ32_00550	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
HKJ32_00555	PF00106	short chain dehydrogenase
HKJ32_00565	PF00750	tRNA synthetases class I (R)
HKJ32_00565	PF05746	DALR anticodon binding domain
HKJ32_00565	PF03485	Arginyl tRNA synthetase N terminal domain
HKJ32_00570	PF04002	RadC-like JAB domain
HKJ32_00575	PF02441	Flavoprotein
HKJ32_00575	PF04127	DNA / pantothenate metabolism flavoprotein
HKJ32_00580	PF00692	dUTPase
HKJ32_00585	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
HKJ32_00585	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
HKJ32_00585	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
HKJ32_00585	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
HKJ32_00595	PF00156	Phosphoribosyl transferase domain
HKJ32_00630	PF07690	Major Facilitator Superfamily
HKJ32_00635	PF03702	Anhydro-N-acetylmuramic acid kinase
HKJ32_00640	PF04225	Opacity-associated protein A LysM-like domain
HKJ32_00640	PF01551	Peptidase family M23
HKJ32_00645	PF00579	tRNA synthetases class I (W and Y)
HKJ32_00675	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
HKJ32_00675	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
HKJ32_00680	PF01578	Cytochrome C assembly protein
HKJ32_00695	PF00009	Elongation factor Tu GTP binding domain
HKJ32_00695	PF16658	Class II release factor RF3, C-terminal domain
HKJ32_00700	PF03006	Haemolysin-III related
HKJ32_00705	PF00535	Glycosyl transferase family 2
HKJ32_00710	PF01026	TatD related DNase
HKJ32_00725	PF01597	Glycine cleavage H-protein
HKJ32_00730	PF01571	Aminomethyltransferase folate-binding domain
HKJ32_00730	PF08669	Glycine cleavage T-protein C-terminal barrel domain
HKJ32_00740	PF01145	SPFH domain / Band 7 family
HKJ32_00740	PF16200	C-terminal region of band_7
HKJ32_00745	PF03819	MazG nucleotide pyrophosphohydrolase domain
HKJ32_00750	PF00459	Inositol monophosphatase family
HKJ32_00755	PF00293	NUDIX domain
HKJ32_00760	PF00202	Aminotransferase class-III
HKJ32_00765	PF04452	RNA methyltransferase
HKJ32_00770	PF00271	Helicase conserved C-terminal domain
HKJ32_00770	PF00270	DEAD/DEAH box helicase
HKJ32_00775	PF01242	6-pyruvoyl tetrahydropterin synthase
HKJ32_00795	PF00589	Phage integrase family
HKJ32_00795	PF02899	Phage integrase, N-terminal SAM-like domain
HKJ32_00830	PF02498	BRO family, N-terminal domain
HKJ32_00830	PF10548	P22AR C-terminal domain
HKJ32_00925	PF00959	Phage lysozyme
HKJ32_00995	PF01381	Helix-turn-helix
HKJ32_01025	PF17482	Phage tail sheath C-terminal domain
HKJ32_01025	PF04984	Phage tail sheath protein subtilisin-like domain
HKJ32_01080	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
HKJ32_01085	PF14579	Helix-hairpin-helix motif
HKJ32_01085	PF07733	Bacterial DNA polymerase III alpha NTPase domain
HKJ32_01085	PF02811	PHP domain
HKJ32_01085	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
HKJ32_01085	PF01336	OB-fold nucleic acid binding domain
HKJ32_01090	PF01259	SAICAR synthetase
HKJ32_01095	PF00684	DnaJ central domain
HKJ32_01095	PF01556	DnaJ C terminal domain
HKJ32_01095	PF00226	DnaJ domain
HKJ32_01100	PF00834	Ribulose-phosphate 3 epimerase family
HKJ32_01110	PF04715	Anthranilate synthase component I, N terminal region
HKJ32_01110	PF00425	chorismate binding enzyme
HKJ32_01115	PF00117	Glutamine amidotransferase class-I
HKJ32_01120	PF00591	Glycosyl transferase family, a/b domain
HKJ32_01120	PF02885	Glycosyl transferase family, helical bundle domain
HKJ32_01125	PF00218	Indole-3-glycerol phosphate synthase
HKJ32_01145	PF01321	Creatinase/Prolidase N-terminal domain
HKJ32_01145	PF00557	Metallopeptidase family M24
HKJ32_01160	PF01702	Queuine tRNA-ribosyltransferase
HKJ32_01165	PF02699	Preprotein translocase subunit
HKJ32_01170	PF02355	Protein export membrane protein
HKJ32_01170	PF13721	SecD export protein N-terminal TM region
HKJ32_01170	PF07549	SecD/SecF GG Motif
HKJ32_01175	PF02355	Protein export membrane protein
HKJ32_01175	PF07549	SecD/SecF GG Motif
HKJ32_01185	PF01743	Poly A polymerase head domain
HKJ32_01185	PF12626	Polymerase A arginine-rich C-terminus
HKJ32_01185	PF12627	Probable RNA and SrmB- binding site of polymerase A
HKJ32_01190	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
HKJ32_01195	PF02548	Ketopantoate hydroxymethyltransferase
HKJ32_01200	PF02569	Pantoate-beta-alanine ligase
HKJ32_01205	PF02261	Aspartate decarboxylase
HKJ32_01210	PF00342	Phosphoglucose isomerase
HKJ32_01220	PF02576	RimP N-terminal domain
HKJ32_01220	PF17384	RimP C-terminal SH3 domain
HKJ32_01225	PF00575	S1 RNA binding domain
HKJ32_01225	PF08529	NusA N-terminal domain
HKJ32_01225	PF13184	NusA-like KH domain
HKJ32_01230	PF00009	Elongation factor Tu GTP binding domain
HKJ32_01230	PF04760	Translation initiation factor IF-2, N-terminal region
HKJ32_01230	PF11987	Translation-initiation factor 2
HKJ32_01230	PF08364	Bacterial translation initiation factor IF-2 associated region
HKJ32_01235	PF02033	Ribosome-binding factor A
HKJ32_01240	PF09157	Pseudouridine synthase II TruB, C-terminal
HKJ32_01240	PF01509	TruB family pseudouridylate synthase (N terminal domain)
HKJ32_01240	PF16198	tRNA pseudouridylate synthase B C-terminal domain
HKJ32_01245	PF00312	Ribosomal protein S15
HKJ32_01250	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
HKJ32_01250	PF01138	3' exoribonuclease family, domain 1
HKJ32_01250	PF03725	3' exoribonuclease family, domain 2
HKJ32_01250	PF00013	KH domain
HKJ32_01250	PF00575	S1 RNA binding domain
HKJ32_01255	PF01638	HxlR-like helix-turn-helix
HKJ32_01260	PF05368	NmrA-like family
HKJ32_01295	PF03880	DbpA RNA binding domain   
HKJ32_01295	PF00270	DEAD/DEAH box helicase
HKJ32_01295	PF00271	Helicase conserved C-terminal domain
HKJ32_01305	PF01012	Electron transfer flavoprotein domain
HKJ32_01305	PF00766	Electron transfer flavoprotein FAD-binding domain
HKJ32_01310	PF01012	Electron transfer flavoprotein domain
HKJ32_01315	PF16363	GDP-mannose 4,6 dehydratase
HKJ32_01320	PF00483	Nucleotidyl transferase
HKJ32_01325	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
HKJ32_01330	PF04321	RmlD substrate binding domain
HKJ32_01335	PF00483	Nucleotidyl transferase
HKJ32_01335	PF01050	Mannose-6-phosphate isomerase
HKJ32_01340	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
HKJ32_01340	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
HKJ32_01340	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
HKJ32_01340	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
HKJ32_01370	PF06779	Uncharacterised MFS-type transporter YbfB
HKJ32_01380	PF00365	Phosphofructokinase
HKJ32_01390	PF08245	Mur ligase middle domain
HKJ32_01390	PF01225	Mur ligase family, catalytic domain
HKJ32_01390	PF02875	Mur ligase family, glutamate ligase domain
HKJ32_01395	PF01569	PAP2 superfamily
HKJ32_01410	PF00883	Cytosol aminopeptidase family, catalytic domain
HKJ32_01410	PF02789	Cytosol aminopeptidase family, N-terminal domain
HKJ32_01415	PF01594	AI-2E family transporter
HKJ32_01435	PF00595	PDZ domain
HKJ32_01440	PF08338	Domain of unknown function (DUF1731)
HKJ32_01440	PF01370	NAD dependent epimerase/dehydratase family
HKJ32_01445	PF13193	AMP-binding enzyme C-terminal domain
HKJ32_01445	PF00501	AMP-binding enzyme
HKJ32_01450	PF00330	Aconitase family (aconitate hydratase)
HKJ32_01450	PF00694	Aconitase C-terminal domain
HKJ32_01465	PF06434	Aconitate hydratase 2 N-terminus
HKJ32_01465	PF00330	Aconitase family (aconitate hydratase)
HKJ32_01465	PF11791	Aconitate B N-terminal domain
HKJ32_01515	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
HKJ32_01525	PF00121	Triosephosphate isomerase
HKJ32_01540	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
HKJ32_01545	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
HKJ32_01550	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
HKJ32_01555	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
HKJ32_01565	PF10531	SLBB domain
HKJ32_01565	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
HKJ32_01565	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
HKJ32_01570	PF00384	Molybdopterin oxidoreductase
HKJ32_01570	PF09326	NADH-ubiquinone oxidoreductase subunit G, C-terminal
HKJ32_01570	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
HKJ32_01575	PF00146	NADH dehydrogenase
HKJ32_01580	PF12838	4Fe-4S dicluster domain
HKJ32_01585	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
HKJ32_01590	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
HKJ32_01595	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
HKJ32_01595	PF00361	Proton-conducting membrane transporter
HKJ32_01600	PF00361	Proton-conducting membrane transporter
HKJ32_01600	PF01059	NADH-ubiquinone oxidoreductase chain 4, amino terminus
HKJ32_01605	PF00361	Proton-conducting membrane transporter
HKJ32_01610	PF00106	short chain dehydrogenase
HKJ32_01615	PF03600	Citrate transporter
HKJ32_01625	PF00072	Response regulator receiver domain
HKJ32_01625	PF00486	Transcriptional regulatory protein, C terminal
HKJ32_01630	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_01630	PF00512	His Kinase A (phospho-acceptor) domain
HKJ32_01630	PF08521	Two-component sensor kinase N-terminal
HKJ32_01645	PF00072	Response regulator receiver domain
HKJ32_01645	PF00196	Bacterial regulatory proteins, luxR family
HKJ32_01650	PF09456	RcsC Alpha-Beta-Loop (ABL)
HKJ32_01650	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_01650	PF00072	Response regulator receiver domain
HKJ32_01650	PF00512	His Kinase A (phospho-acceptor) domain
HKJ32_01665	PF00375	Sodium:dicarboxylate symporter family
HKJ32_01670	PF00390	Malic enzyme, N-terminal domain
HKJ32_01670	PF03949	Malic enzyme, NAD binding domain
HKJ32_01670	PF01515	Phosphate acetyl/butaryl transferase
HKJ32_01675	PF00183	Hsp90 protein
HKJ32_01675	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_01685	PF01467	Cytidylyltransferase-like
HKJ32_01695	PF00037	4Fe-4S binding domain
HKJ32_01705	PF00990	Diguanylate cyclase, GGDEF domain
HKJ32_01705	PF05230	MASE2 domain
HKJ32_01710	PF08460	Bacterial SH3 domain
HKJ32_01710	PF01551	Peptidase family M23
HKJ32_01715	PF01979	Amidohydrolase family
HKJ32_01720	PF01809	Putative membrane protein insertion efficiency factor
HKJ32_01725	PF01258	Prokaryotic dksA/traR C4-type zinc finger
HKJ32_01735	PF05977	Transmembrane secretion effector
HKJ32_01740	PF02657	Fe-S metabolism associated domain
HKJ32_01745	PF01406	tRNA synthetases class I (C) catalytic domain
HKJ32_01745	PF09190	DALR domain
HKJ32_01760	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
HKJ32_01760	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
HKJ32_01765	PF00764	Arginosuccinate synthase
HKJ32_01770	PF01546	Peptidase family M20/M25/M40
HKJ32_01770	PF07687	Peptidase dimerisation domain
HKJ32_01775	PF04768	NAT, N-acetyltransferase, of N-acetylglutamate synthase
HKJ32_01775	PF00696	Amino acid kinase family
HKJ32_01780	PF01118	Semialdehyde dehydrogenase, NAD binding domain
HKJ32_01785	PF00206	Lyase
HKJ32_01790	PF01472	PUA domain
HKJ32_01790	PF00696	Amino acid kinase family
HKJ32_01795	PF00171	Aldehyde dehydrogenase family
HKJ32_01825	PF00353	RTX calcium-binding nonapeptide repeat (4 copies)
HKJ32_01825	PF06594	Haemolysin-type calcium binding protein related domain
HKJ32_01830	PF14437	MafB19-like deaminase
HKJ32_01835	PF01325	Iron dependent repressor, N-terminal DNA binding domain
HKJ32_01835	PF02742	Iron dependent repressor, metal binding and dimerisation domain
HKJ32_01840	PF01566	Natural resistance-associated macrophage protein
HKJ32_01845	PF04377	Arginine-tRNA-protein transferase, C terminus
HKJ32_01845	PF04376	Arginine-tRNA-protein transferase, N terminus
HKJ32_01865	PF03797	Autotransporter beta-domain
HKJ32_01865	PF00082	Subtilase family
HKJ32_01865	PF12951	Passenger-associated-transport-repeat
HKJ32_01880	PF01553	Acyltransferase
HKJ32_01900	PF05221	S-adenosyl-L-homocysteine hydrolase
HKJ32_01900	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
HKJ32_01910	PF01351	Ribonuclease HII
HKJ32_01915	PF02684	Lipid-A-disaccharide synthetase
HKJ32_01920	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
HKJ32_01920	PF00132	Bacterial transferase hexapeptide (six repeats)
HKJ32_01925	PF07977	FabA-like domain
HKJ32_01930	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
HKJ32_01930	PF00132	Bacterial transferase hexapeptide (six repeats)
HKJ32_01935	PF07244	Surface antigen variable number repeat
HKJ32_01935	PF01103	Surface antigen
HKJ32_01940	PF17820	PDZ domain
HKJ32_01940	PF02163	Peptidase family M50
HKJ32_01945	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
HKJ32_01945	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
HKJ32_01945	PF13288	DXP reductoisomerase C-terminal domain
HKJ32_01955	PF01255	Putative undecaprenyl diphosphate synthase
HKJ32_01960	PF01765	Ribosome recycling factor
HKJ32_01990	PF00696	Amino acid kinase family
HKJ32_02015	PF01081	KDPG and KHG aldolase
HKJ32_02020	PF00920	Dehydratase family
HKJ32_02025	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
HKJ32_02030	PF02685	Glucokinase
HKJ32_02035	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
HKJ32_02035	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
HKJ32_02040	PF17912	MalK OB fold domain
HKJ32_02040	PF00005	ABC transporter
HKJ32_02045	PF01571	Aminomethyltransferase folate-binding domain
HKJ32_02055	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
HKJ32_02060	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
HKJ32_02065	PF02910	Fumarate reductase flavoprotein C-term
HKJ32_02065	PF00890	FAD binding domain
HKJ32_02070	PF13085	2Fe-2S iron-sulfur cluster binding domain
HKJ32_02075	PF03937	Flavinator of succinate dehydrogenase
HKJ32_02085	PF12704	MacB-like periplasmic core domain
HKJ32_02085	PF02687	FtsX-like permease family
HKJ32_02090	PF00005	ABC transporter
HKJ32_02095	PF00753	Metallo-beta-lactamase superfamily
HKJ32_02095	PF03772	Competence protein
HKJ32_02100	PF01618	MotA/TolQ/ExbB proton channel family
HKJ32_02110	PF00664	ABC transporter transmembrane region
HKJ32_02110	PF00005	ABC transporter
HKJ32_02115	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
HKJ32_02185	PF01381	Helix-turn-helix
HKJ32_02255	PF00959	Phage lysozyme
HKJ32_02260	PF01555	DNA methylase
HKJ32_02335	PF04264	YceI-like domain
HKJ32_02340	PF13091	PLD-like domain
HKJ32_02355	PF03358	NADPH-dependent FMN reductase
HKJ32_02365	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
HKJ32_02365	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
HKJ32_02385	PF01367	5'-3' exonuclease, C-terminal SAM fold
HKJ32_02385	PF01612	3'-5' exonuclease
HKJ32_02385	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
HKJ32_02385	PF00476	DNA polymerase family A
HKJ32_02390	PF01113	Dihydrodipicolinate reductase, N-terminus
HKJ32_02390	PF05173	Dihydrodipicolinate reductase, C-terminus
HKJ32_02395	PF00117	Glutamine amidotransferase class-I
HKJ32_02395	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
HKJ32_02400	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
HKJ32_02400	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
HKJ32_02400	PF02142	MGS-like domain
HKJ32_02405	PF01272	Transcription elongation factor, GreA/GreB, C-term
HKJ32_02405	PF03449	Transcription elongation factor, N-terminal
HKJ32_02415	PF02272	DHHA1 domain
HKJ32_02415	PF01368	DHH family
HKJ32_02415	PF17768	RecJ OB domain
HKJ32_02425	PF00152	tRNA synthetases class II (D, K and N) 
HKJ32_02425	PF01336	OB-fold nucleic acid binding domain
HKJ32_02430	PF00072	Response regulator receiver domain
HKJ32_02435	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_02435	PF00512	His Kinase A (phospho-acceptor) domain
HKJ32_02435	PF00072	Response regulator receiver domain
HKJ32_02435	PF01627	Hpt domain
HKJ32_02440	PF00378	Enoyl-CoA hydratase/isomerase
HKJ32_02445	PF01842	ACT domain
HKJ32_02445	PF00696	Amino acid kinase family
HKJ32_02455	PF08245	Mur ligase middle domain
HKJ32_02465	PF00293	NUDIX domain
HKJ32_02470	PF02219	Methylenetetrahydrofolate reductase
HKJ32_02480	PF02545	Maf-like protein
HKJ32_02485	PF00575	S1 RNA binding domain
HKJ32_02485	PF10150	Ribonuclease E/G family
HKJ32_02495	PF01523	Putative modulator of DNA gyrase
HKJ32_02500	PF04751	Protein of unknown function (DUF615)
HKJ32_02505	PF01523	Putative modulator of DNA gyrase
HKJ32_02510	PF03466	LysR substrate binding domain
HKJ32_02510	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
HKJ32_02525	PF00107	Zinc-binding dehydrogenase
HKJ32_02525	PF08240	Alcohol dehydrogenase GroES-like domain
HKJ32_02535	PF00132	Bacterial transferase hexapeptide (six repeats)
HKJ32_02535	PF14602	Hexapeptide repeat of succinyl-transferase
HKJ32_02535	PF12804	MobA-like NTP transferase domain
HKJ32_02545	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
HKJ32_02545	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
HKJ32_02550	PF02874	ATP synthase alpha/beta family, beta-barrel domain
HKJ32_02550	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
HKJ32_02555	PF00231	ATP synthase
HKJ32_02560	PF02874	ATP synthase alpha/beta family, beta-barrel domain
HKJ32_02560	PF00306	ATP synthase alpha/beta chain, C terminal domain
HKJ32_02560	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
HKJ32_02565	PF00213	ATP synthase delta (OSCP) subunit
HKJ32_02570	PF00430	ATP synthase B/B' CF(0)
HKJ32_02575	PF00137	ATP synthase subunit C
HKJ32_02580	PF00119	ATP synthase A chain
HKJ32_02590	PF00338	Ribosomal protein S10p/S20e
HKJ32_02595	PF00297	Ribosomal protein L3
HKJ32_02600	PF00573	Ribosomal protein L4/L1 family
HKJ32_02605	PF00276	Ribosomal protein L23
HKJ32_02610	PF03947	Ribosomal Proteins L2, C-terminal domain
HKJ32_02610	PF00181	Ribosomal Proteins L2, RNA binding domain
HKJ32_02615	PF00203	Ribosomal protein S19
HKJ32_02620	PF00237	Ribosomal protein L22p/L17e
HKJ32_02625	PF00189	Ribosomal protein S3, C-terminal domain
HKJ32_02625	PF07650	KH domain
HKJ32_02630	PF00252	Ribosomal protein L16p/L10e
HKJ32_02635	PF00831	Ribosomal L29 protein
HKJ32_02640	PF00366	Ribosomal protein S17
HKJ32_02645	PF00238	Ribosomal protein L14p/L23e
HKJ32_02650	PF00467	KOW motif
HKJ32_02650	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
HKJ32_02655	PF00673	ribosomal L5P family C-terminus
HKJ32_02655	PF00281	Ribosomal protein L5
HKJ32_02660	PF00253	Ribosomal protein S14p/S29e
HKJ32_02665	PF00410	Ribosomal protein S8
HKJ32_02670	PF00347	Ribosomal protein L6
HKJ32_02675	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
HKJ32_02680	PF03719	Ribosomal protein S5, C-terminal domain
HKJ32_02680	PF00333	Ribosomal protein S5, N-terminal domain
HKJ32_02685	PF00327	Ribosomal protein L30p/L7e
HKJ32_02690	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
HKJ32_02695	PF00344	SecY translocase
HKJ32_02700	PF00416	Ribosomal protein S13/S18
HKJ32_02705	PF00411	Ribosomal protein S11
HKJ32_02710	PF01479	S4 domain
HKJ32_02710	PF00163	Ribosomal protein S4/S9 N-terminal domain
HKJ32_02715	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
HKJ32_02715	PF01000	RNA polymerase Rpb3/RpoA insert domain
HKJ32_02715	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
HKJ32_02720	PF01196	Ribosomal protein L17
HKJ32_02725	PF04380	Membrane fusogenic activity
HKJ32_02730	PF01078	Magnesium chelatase, subunit ChlI
HKJ32_02730	PF13335	Magnesium chelatase, subunit ChlI C-terminal
HKJ32_02750	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
HKJ32_02750	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
HKJ32_02750	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
HKJ32_02765	PF05698	Bacterial trigger factor protein (TF) C-terminus
HKJ32_02765	PF05697	Bacterial trigger factor protein (TF)
HKJ32_02770	PF00574	Clp protease
HKJ32_02775	PF06689	ClpX C4-type zinc finger
HKJ32_02775	PF10431	C-terminal, D2-small domain, of ClpB protein 
HKJ32_02775	PF07724	AAA domain (Cdc48 subfamily)
HKJ32_02780	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
HKJ32_02780	PF05362	Lon protease (S16) C-terminal proteolytic domain
HKJ32_02780	PF00004	ATPase family associated with various cellular activities (AAA)
HKJ32_02785	PF00216	Bacterial DNA-binding protein
HKJ32_02810	PF03477	ATP cone domain
HKJ32_02810	PF00317	Ribonucleotide reductase, all-alpha domain
HKJ32_02810	PF02867	Ribonucleotide reductase, barrel domain
HKJ32_02815	PF00268	Ribonucleotide reductase, small chain
HKJ32_02830	PF00849	RNA pseudouridylate synthase
HKJ32_02830	PF01479	S4 domain
HKJ32_02835	PF13419	Haloacid dehalogenase-like hydrolase
HKJ32_02845	PF00830	Ribosomal L28 family
HKJ32_02850	PF00471	Ribosomal protein L33
HKJ32_02855	PF13091	PLD-like domain
HKJ32_02855	PF13396	Phospholipase_D-nuclease N-terminal
HKJ32_02860	PF00043	Glutathione S-transferase, C-terminal domain
HKJ32_02860	PF02798	Glutathione S-transferase, N-terminal domain
HKJ32_02865	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
HKJ32_02865	PF00056	lactate/malate dehydrogenase, NAD binding domain
HKJ32_02870	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
HKJ32_02885	PF00529	HlyD membrane-fusion protein of T1SS
HKJ32_02885	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
HKJ32_02910	PF03412	Peptidase C39 family
HKJ32_02910	PF00664	ABC transporter transmembrane region
HKJ32_02910	PF00005	ABC transporter
HKJ32_02915	PF01061	ABC-2 type transporter
HKJ32_02920	PF00005	ABC transporter
HKJ32_02925	PF05567	Neisseria PilC beta-propeller domain
HKJ32_02945	PF08482	ATP-dependent helicase C-terminal
HKJ32_02945	PF00270	DEAD/DEAH box helicase
HKJ32_02945	PF00271	Helicase conserved C-terminal domain
HKJ32_02945	PF04408	Helicase associated domain (HA2)
HKJ32_02960	PF13185	GAF domain
HKJ32_02970	PF01103	Surface antigen
HKJ32_02970	PF17243	POTRA domain TamA domain 1
HKJ32_02975	PF04357	TamB, inner membrane protein subunit of TAM complex
HKJ32_03030	PF00330	Aconitase family (aconitate hydratase)
HKJ32_03030	PF00694	Aconitase C-terminal domain
HKJ32_03035	PF04303	PrpF protein
HKJ32_03065	PF07703	Alpha-2-macroglobulin bait region domain
HKJ32_03065	PF00207	Alpha-2-macroglobulin family
HKJ32_03065	PF17970	Bacterial Alpha-2-macroglobulin MG1 domain 
HKJ32_03065	PF17973	Bacterial Alpha-2-macroglobulin MG10 domain
HKJ32_03065	PF17962	Bacterial macroglobulin domain 6
HKJ32_03065	PF11974	Bacterial alpha-2-macroglobulin MG3 domain
HKJ32_03065	PF17972	Bacterial Alpha-2-macroglobulin MG5 domain
HKJ32_03065	PF01835	MG2 domain
HKJ32_03070	PF07859	alpha/beta hydrolase fold
HKJ32_03085	PF00929	Exonuclease
HKJ32_03090	PF05552	Conserved TM helix
HKJ32_03090	PF00924	Mechanosensitive ion channel
HKJ32_03095	PF00391	PEP-utilising enzyme, mobile domain
HKJ32_03095	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
HKJ32_03095	PF02896	PEP-utilising enzyme, TIM barrel domain
HKJ32_03100	PF03618	Kinase/pyrophosphorylase
HKJ32_03120	PF01341	Glycosyl hydrolases family 6
HKJ32_03120	PF00553	Cellulose binding domain
HKJ32_03120	PF00041	Fibronectin type III domain
HKJ32_03125	PF04055	Radical SAM superfamily
HKJ32_03125	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
HKJ32_03130	PF03099	Biotin/lipoate A/B protein ligase family
HKJ32_03135	PF04359	Protein of unknown function (DUF493)
HKJ32_03155	PF04286	Protein of unknown function (DUF445)
HKJ32_03160	PF00571	CBS domain
HKJ32_03160	PF01595	Cyclin M transmembrane N-terminal domain
HKJ32_03160	PF03471	Transporter associated domain
HKJ32_03175	PF00204	DNA gyrase B
HKJ32_03175	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_03175	PF01751	Toprim domain
HKJ32_03175	PF00986	DNA gyrase B subunit, carboxyl terminus
HKJ32_03185	PF00117	Glutamine amidotransferase class-I
HKJ32_03185	PF06418	CTP synthase N-terminus
HKJ32_03190	PF00793	DAHP synthetase I family
HKJ32_03195	PF00113	Enolase, C-terminal TIM barrel domain
HKJ32_03195	PF03952	Enolase, N-terminal domain
HKJ32_03200	PF04977	Septum formation initiator
HKJ32_03205	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
HKJ32_03210	PF02542	YgbB family
HKJ32_03215	PF01713	Smr domain
HKJ32_03240	PF02470	MlaD protein
HKJ32_03240	PF03886	ABC-type transport auxiliary lipoprotein component
HKJ32_03245	PF00005	ABC transporter
HKJ32_03250	PF02405	Permease MlaE
HKJ32_03290	PF00436	Single-strand binding protein family
HKJ32_03315	PF07963	Prokaryotic N-terminal methylation motif
HKJ32_03425	PF00239	Resolvase, N terminal domain
HKJ32_03430	PF07282	Putative transposase DNA-binding domain
HKJ32_03430	PF01385	Probable transposase
HKJ32_03430	PF12323	Helix-turn-helix domain
HKJ32_03470	PF04085	rod shape-determining protein MreC
HKJ32_03475	PF04093	rod shape-determining protein MreD
HKJ32_03480	PF03717	Penicillin-binding Protein dimerisation domain
HKJ32_03480	PF00905	Penicillin binding protein transpeptidase domain
HKJ32_03485	PF01098	Cell cycle protein
HKJ32_03490	PF02547	Queuosine biosynthesis protein
HKJ32_03495	PF02824	TGS domain
HKJ32_03495	PF04607	Region found in RelA / SpoT proteins
HKJ32_03495	PF13291	ACT domain
HKJ32_03510	PF03776	Septum formation topological specificity factor MinE
HKJ32_03515	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
HKJ32_03520	PF03775	Septum formation inhibitor MinC, C-terminal domain
HKJ32_03520	PF05209	Septum formation inhibitor MinC, N-terminal domain
HKJ32_03535	PF00730	HhH-GPD superfamily base excision DNA repair protein
HKJ32_03550	PF04264	YceI-like domain
HKJ32_03555	PF00072	Response regulator receiver domain
HKJ32_03555	PF00512	His Kinase A (phospho-acceptor) domain
HKJ32_03555	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_03555	PF00672	HAMP domain
HKJ32_03555	PF17149	Periplasmic sensor domain found in signal transduction proteins
HKJ32_03555	PF01627	Hpt domain
HKJ32_03560	PF01208	Uroporphyrinogen decarboxylase (URO-D)
HKJ32_03565	PF01761	3-dehydroquinate synthase
HKJ32_03570	PF01202	Shikimate kinase
HKJ32_03575	PF01243	Pyridoxamine 5'-phosphate oxidase
HKJ32_03575	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
HKJ32_03580	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
HKJ32_03580	PF00749	tRNA synthetases class I (E and Q), catalytic domain
HKJ32_03590	PF03932	CutC family
HKJ32_03605	PF00528	Binding-protein-dependent transport system inner membrane component
HKJ32_03610	PF00528	Binding-protein-dependent transport system inner membrane component
HKJ32_03615	PF12857	TOBE-like domain
HKJ32_03615	PF00005	ABC transporter
HKJ32_03625	PF04545	Sigma-70, region 4
HKJ32_03625	PF04546	Sigma-70, non-essential region
HKJ32_03625	PF03979	Sigma-70 factor, region 1.1
HKJ32_03625	PF04539	Sigma-70 region 3
HKJ32_03625	PF04542	Sigma-70 region 2 
HKJ32_03625	PF00140	Sigma-70 factor, region 1.2
HKJ32_03630	PF03989	DNA gyrase C-terminal domain, beta-propeller
HKJ32_03630	PF00521	DNA gyrase/topoisomerase IV, subunit A
HKJ32_03635	PF01047	MarR family
HKJ32_03645	PF12697	Alpha/beta hydrolase family
HKJ32_03650	PF00155	Aminotransferase class I and II
HKJ32_03660	PF01040	UbiA prenyltransferase family
HKJ32_03665	PF00753	Metallo-beta-lactamase superfamily
HKJ32_03670	PF01743	Poly A polymerase head domain
HKJ32_03670	PF01966	HD domain
HKJ32_03670	PF12627	Probable RNA and SrmB- binding site of polymerase A
HKJ32_03675	PF01464	Transglycosylase SLT domain
HKJ32_03675	PF14718	Soluble lytic murein transglycosylase L domain
HKJ32_03680	PF02666	Phosphatidylserine decarboxylase
HKJ32_03685	PF02630	SCO1/SenC
HKJ32_03690	PF05175	Methyltransferase small domain
HKJ32_03695	PF01264	Chorismate synthase
HKJ32_03700	PF02774	Semialdehyde dehydrogenase, dimerisation domain
HKJ32_03700	PF01118	Semialdehyde dehydrogenase, NAD binding domain
HKJ32_03710	PF01416	tRNA pseudouridine synthase
HKJ32_03715	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
HKJ32_03720	PF00291	Pyridoxal-phosphate dependent enzyme
HKJ32_03725	PF00290	Tryptophan synthase alpha chain
HKJ32_03730	PF18073	Rubredoxin metal binding domain
HKJ32_03735	PF00296	Luciferase-like monooxygenase
HKJ32_03745	PF00271	Helicase conserved C-terminal domain
HKJ32_03745	PF16124	RecQ zinc-binding
HKJ32_03745	PF09382	RQC domain
HKJ32_03745	PF00570	HRDC domain
HKJ32_03745	PF00270	DEAD/DEAH box helicase
HKJ32_03750	PF00210	Ferritin-like domain
HKJ32_03755	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
HKJ32_03755	PF04408	Helicase associated domain (HA2)
HKJ32_03755	PF11898	Domain of unknown function (DUF3418)
HKJ32_03755	PF00270	DEAD/DEAH box helicase
HKJ32_03755	PF00271	Helicase conserved C-terminal domain
HKJ32_03760	PF02347	Glycine cleavage system P-protein
HKJ32_03765	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
HKJ32_03770	PF00510	Cytochrome c oxidase subunit III
HKJ32_03775	PF00115	Cytochrome C and Quinol oxidase polypeptide I
HKJ32_03780	PF06481	COX Aromatic Rich Motif
HKJ32_03780	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
HKJ32_03785	PF00348	Polyprenyl synthetase
HKJ32_03790	PF00436	Single-strand binding protein family
HKJ32_03805	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
HKJ32_03830	PF05524	PEP-utilising enzyme, N-terminal
HKJ32_03830	PF02896	PEP-utilising enzyme, TIM barrel domain
HKJ32_03830	PF00391	PEP-utilising enzyme, mobile domain
HKJ32_03835	PF00381	PTS HPr component phosphorylation site
HKJ32_03845	PF03668	P-loop ATPase protein family
HKJ32_03850	PF07475	HPr Serine kinase C-terminal domain
HKJ32_03850	PF02603	HPr Serine kinase N terminus
HKJ32_03855	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
HKJ32_03860	PF04552	Sigma-54, DNA binding domain
HKJ32_03860	PF04963	Sigma-54 factor, core binding domain
HKJ32_03860	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
HKJ32_03865	PF12399	Branched-chain amino acid ATP-binding cassette transporter
HKJ32_03865	PF00005	ABC transporter
HKJ32_03885	PF01380	SIS domain
HKJ32_03885	PF00571	CBS domain
HKJ32_03890	PF01722	BolA-like protein
HKJ32_03895	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
HKJ32_03925	PF18076	Formylglycinamide ribonucleotide amidotransferase N-terminal
HKJ32_03925	PF02769	AIR synthase related protein, C-terminal domain
HKJ32_03925	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
HKJ32_03930	PF10411	Disulfide bond isomerase protein N-terminus
HKJ32_03930	PF13098	Thioredoxin-like domain
HKJ32_03935	PF00589	Phage integrase family
HKJ32_03935	PF02899	Phage integrase, N-terminal SAM-like domain
HKJ32_03940	PF00520	Ion transport protein
HKJ32_03940	PF00027	Cyclic nucleotide-binding domain
HKJ32_03945	PF00202	Aminotransferase class-III
HKJ32_03950	PF04107	Glutamate-cysteine ligase family 2(GCS2)
HKJ32_03955	PF01926	50S ribosome-binding GTPase
HKJ32_03970	PF01323	DSBA-like thioredoxin domain
HKJ32_03975	PF01323	DSBA-like thioredoxin domain
HKJ32_03985	PF04356	Protein of unknown function (DUF489)
HKJ32_03995	PF00293	NUDIX domain
HKJ32_04000	PF02617	ATP-dependent Clp protease adaptor protein ClpS
HKJ32_04005	PF02861	Clp amino terminal domain, pathogenicity island component
HKJ32_04005	PF07724	AAA domain (Cdc48 subfamily)
HKJ32_04005	PF17871	AAA lid domain
HKJ32_04005	PF00004	ATPase family associated with various cellular activities (AAA)
HKJ32_04005	PF10431	C-terminal, D2-small domain, of ClpB protein 
HKJ32_04010	PF01176	Translation initiation factor 1A / IF-1
HKJ32_04015	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
HKJ32_04025	PF07992	Pyridine nucleotide-disulphide oxidoreductase
HKJ32_04030	PF17854	FtsK alpha domain
HKJ32_04030	PF09397	Ftsk gamma domain
HKJ32_04030	PF01580	FtsK/SpoIIIE family
HKJ32_04030	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
HKJ32_04040	PF03548	Outer membrane lipoprotein carrier protein LolA
HKJ32_04045	PF00004	ATPase family associated with various cellular activities (AAA)
HKJ32_04045	PF12002	MgsA AAA+ ATPase C terminal
HKJ32_04045	PF16193	AAA C-terminal domain
HKJ32_04050	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
HKJ32_04055	PF00512	His Kinase A (phospho-acceptor) domain
HKJ32_04055	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_04060	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
HKJ32_04080	PF02685	Glucokinase
HKJ32_04090	PF07690	Major Facilitator Superfamily
HKJ32_04095	PF00356	Bacterial regulatory proteins, lacI family
HKJ32_04100	PF01380	SIS domain
HKJ32_04105	PF01979	Amidohydrolase family
HKJ32_04110	PF17848	Acetyl-coA carboxylase zinc finger domain
HKJ32_04110	PF01039	Carboxyl transferase domain
HKJ32_04115	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
HKJ32_04115	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
HKJ32_04115	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
HKJ32_04115	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
HKJ32_04120	PF01522	Polysaccharide deacetylase
HKJ32_04125	PF13439	Glycosyltransferase Family 4
HKJ32_04125	PF00534	Glycosyl transferases group 1
HKJ32_04130	PF00355	Rieske [2Fe-2S] domain
HKJ32_04135	PF00266	Aminotransferase class-V
HKJ32_04140	PF01458	Uncharacterized protein family (UPF0051)
HKJ32_04145	PF00005	ABC transporter
HKJ32_04150	PF01458	Uncharacterized protein family (UPF0051)
HKJ32_04155	PF02082	Transcriptional regulator
HKJ32_04165	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
HKJ32_04165	PF00326	Prolyl oligopeptidase family
HKJ32_04175	PF01678	Diaminopimelate epimerase
HKJ32_04185	PF00589	Phage integrase family
HKJ32_04185	PF02899	Phage integrase, N-terminal SAM-like domain
HKJ32_04190	PF00227	Proteasome subunit
HKJ32_04195	PF10431	C-terminal, D2-small domain, of ClpB protein 
HKJ32_04195	PF00004	ATPase family associated with various cellular activities (AAA)
HKJ32_04195	PF07724	AAA domain (Cdc48 subfamily)
HKJ32_04240	PF17482	Phage tail sheath C-terminal domain
HKJ32_04240	PF04984	Phage tail sheath protein subtilisin-like domain
HKJ32_04265	PF04221	RelB antitoxin
HKJ32_04340	PF00959	Phage lysozyme
HKJ32_04445	PF10548	P22AR C-terminal domain
HKJ32_04445	PF02498	BRO family, N-terminal domain
HKJ32_04480	PF01209	ubiE/COQ5 methyltransferase family
HKJ32_04485	PF01433	Peptidase family M1 domain
HKJ32_04485	PF11838	ERAP1-like C-terminal domain
HKJ32_04505	PF13369	Transglutaminase-like superfamily
HKJ32_04520	PF01507	Phosphoadenosine phosphosulfate reductase family
HKJ32_04525	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
HKJ32_04525	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
HKJ32_04530	PF00258	Flavodoxin
HKJ32_04530	PF00667	FAD binding domain
HKJ32_04530	PF00175	Oxidoreductase NAD-binding domain 
HKJ32_04535	PF01507	Phosphoadenosine phosphosulfate reductase family
HKJ32_04540	PF00009	Elongation factor Tu GTP binding domain
HKJ32_04545	PF01192	RNA polymerase Rpb6 
HKJ32_04550	PF00625	Guanylate kinase
HKJ32_04555	PF08340	Domain of unknown function (DUF1732)
HKJ32_04555	PF03755	YicC-like family, N-terminal region 
HKJ32_04560	PF03725	3' exoribonuclease family, domain 2
HKJ32_04560	PF01138	3' exoribonuclease family, domain 1
HKJ32_04565	PF01725	Ham1 family
HKJ32_04570	PF06969	HemN C-terminal domain
HKJ32_04570	PF04055	Radical SAM superfamily
HKJ32_04585	PF00561	alpha/beta hydrolase fold
HKJ32_04590	PF17827	PrmC N-terminal domain
HKJ32_04590	PF05175	Methyltransferase small domain
HKJ32_04605	PF05662	Coiled stalk of trimeric autotransporter adhesin
HKJ32_04605	PF13018	Extended Signal Peptide of Type V secretion system
HKJ32_04605	PF03895	YadA-like membrane anchor domain
HKJ32_04605	PF05658	Head domain of trimeric autotransporter adhesin
HKJ32_04610	PF00437	Type II/IV secretion system protein
HKJ32_04610	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
HKJ32_04615	PF00482	Type II secretion system (T2SS), protein F
HKJ32_04620	PF08334	Type II secretion system (T2SS), protein G
HKJ32_04625	PF12019	Type II transport protein GspH
HKJ32_04630	PF07963	Prokaryotic N-terminal methylation motif
HKJ32_04640	PF03934	Type II secretion system (T2SS), protein K
HKJ32_04645	PF05137	Fimbrial assembly protein (PilN)
HKJ32_04650	PF10741	Type II secretion system (T2SS), protein M subtype b
HKJ32_04660	PF00263	Bacterial type II and III secretion system protein
HKJ32_04660	PF03958	Bacterial type II/III secretion system short domain
HKJ32_04670	PF00578	AhpC/TSA family
HKJ32_04670	PF10417	C-terminal domain of 1-Cys peroxiredoxin
HKJ32_04675	PF13192	Thioredoxin domain
HKJ32_04675	PF07992	Pyridine nucleotide-disulphide oxidoreductase
HKJ32_04680	PF03466	LysR substrate binding domain
HKJ32_04680	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
HKJ32_04685	PF00814	Glycoprotease family
HKJ32_04690	PF01197	Ribosomal protein L31
HKJ32_04695	PF00285	Citrate synthase, C-terminal domain
HKJ32_04700	PF00380	Ribosomal protein S9/S16
HKJ32_04705	PF00572	Ribosomal protein L13
HKJ32_04710	PF03232	Ubiquinone biosynthesis protein COQ7
HKJ32_04715	PF02675	S-adenosylmethionine decarboxylase 
HKJ32_04720	PF00027	Cyclic nucleotide-binding domain
HKJ32_04720	PF00325	Bacterial regulatory proteins, crp family
HKJ32_04745	PF00899	ThiF family
HKJ32_04755	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HKJ32_04755	PF07992	Pyridine nucleotide-disulphide oxidoreductase
HKJ32_04765	PF02817	e3 binding domain
HKJ32_04765	PF00364	Biotin-requiring enzyme
HKJ32_04765	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
HKJ32_04770	PF02779	Transketolase, pyrimidine binding domain
HKJ32_04770	PF16870	2-oxoglutarate dehydrogenase C-terminal
HKJ32_04770	PF00676	Dehydrogenase E1 component
HKJ32_04770	PF16078	2-oxoglutarate dehydrogenase N-terminus
HKJ32_04775	PF08007	Cupin superfamily protein
HKJ32_04780	PF00206	Lyase
HKJ32_04780	PF08328	Adenylosuccinate lyase C-terminal
HKJ32_04785	PF10415	Fumarase C C-terminus
HKJ32_04785	PF00206	Lyase
HKJ32_04800	PF07963	Prokaryotic N-terminal methylation motif
HKJ32_04800	PF00114	Pilin (bacterial filament)
HKJ32_04885	PF00959	Phage lysozyme
HKJ32_04890	PF01555	DNA methylase
HKJ32_04930	PF13932	GidA associated domain
HKJ32_04930	PF01134	Glucose inhibited division protein A
HKJ32_04955	PF13649	Methyltransferase domain
HKJ32_04970	PF02649	Type I GTP cyclohydrolase folE2
HKJ32_04975	PF00132	Bacterial transferase hexapeptide (six repeats)
HKJ32_04980	PF00873	AcrB/AcrD/AcrF family
HKJ32_04985	PF00529	HlyD membrane-fusion protein of T1SS
HKJ32_04985	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
HKJ32_04990	PF05088	Bacterial NAD-glutamate dehydrogenase
HKJ32_04995	PF01513	ATP-NAD kinase
HKJ32_05010	PF00239	Resolvase, N terminal domain
HKJ32_05010	PF02796	Helix-turn-helix domain of resolvase
HKJ32_05015	PF00440	Bacterial regulatory proteins, tetR family
HKJ32_05025	PF00873	AcrB/AcrD/AcrF family
HKJ32_05060	PF00933	Glycosyl hydrolase family 3 N terminal domain
HKJ32_05060	PF01915	Glycosyl hydrolase family 3 C-terminal domain
HKJ32_05065	PF13362	Toprim domain
HKJ32_05065	PF08401	Domain of unknown function (DUF1738)
HKJ32_05065	PF18818	Metallopeptidase superfamily domain
HKJ32_05070	PF12706	Beta-lactamase superfamily domain
HKJ32_05080	PF08411	Exonuclease C-terminal
HKJ32_05080	PF00929	Exonuclease
HKJ32_05095	PF00999	Sodium/hydrogen exchanger family
HKJ32_05105	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
HKJ32_05115	PF01812	5-formyltetrahydrofolate cyclo-ligase family
HKJ32_05125	PF05164	Cell division protein ZapA
HKJ32_05135	PF03695	Uncharacterised protein family (UPF0149)
HKJ32_05140	PF00557	Metallopeptidase family M24
HKJ32_05140	PF05195	Aminopeptidase P, N-terminal domain
HKJ32_05145	PF00293	NUDIX domain
HKJ32_05150	PF00881	Nitroreductase family
HKJ32_05185	PF01063	Amino-transferase class IV
HKJ32_05190	PF02954	Bacterial regulatory protein, Fis family
HKJ32_05200	PF01381	Helix-turn-helix
HKJ32_05210	PF00535	Glycosyl transferase family 2
HKJ32_05220	PF00925	GTP cyclohydrolase II
HKJ32_05235	PF00575	S1 RNA binding domain
HKJ32_05235	PF08206	Ribonuclease B OB domain
HKJ32_05235	PF08461	Ribonuclease R winged-helix domain
HKJ32_05235	PF17876	Cold shock domain
HKJ32_05235	PF00773	RNB domain
HKJ32_05240	PF08032	RNA 2'-O ribose methyltransferase substrate binding
HKJ32_05240	PF00588	SpoU rRNA Methylase family
HKJ32_05245	PF00132	Bacterial transferase hexapeptide (six repeats)
HKJ32_05250	PF01227	GTP cyclohydrolase I
HKJ32_05255	PF03895	YadA-like membrane anchor domain
HKJ32_05255	PF05658	Head domain of trimeric autotransporter adhesin
HKJ32_05255	PF05662	Coiled stalk of trimeric autotransporter adhesin
HKJ32_05260	PF03186	CobD/Cbib protein
HKJ32_05265	PF12805	FUSC-like inner membrane protein yccS
HKJ32_05270	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
HKJ32_05270	PF02844	Phosphoribosylglycinamide synthetase, N domain
HKJ32_05270	PF02843	Phosphoribosylglycinamide synthetase, C domain
HKJ32_05275	PF02142	MGS-like domain
HKJ32_05275	PF01808	AICARFT/IMPCHase bienzyme
HKJ32_05290	PF00588	SpoU rRNA Methylase family
HKJ32_05300	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
HKJ32_05300	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
HKJ32_05320	PF00561	alpha/beta hydrolase fold
HKJ32_05325	PF03692	Putative zinc- or iron-chelating domain
HKJ32_05330	PF00795	Carbon-nitrogen hydrolase
HKJ32_05330	PF02540	NAD synthase
HKJ32_05335	PF02091	Glycyl-tRNA synthetase alpha subunit
HKJ32_05340	PF02092	Glycyl-tRNA synthetase beta subunit
HKJ32_05340	PF05746	DALR anticodon binding domain
HKJ32_05355	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
HKJ32_05355	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
HKJ32_05360	PF00072	Response regulator receiver domain
HKJ32_05365	PF01584	CheW-like domain
HKJ32_05370	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
HKJ32_05370	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
HKJ32_05375	PF01627	Hpt domain
HKJ32_05375	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_05375	PF02895	Signal transducing histidine kinase, homodimeric domain
HKJ32_05375	PF01584	CheW-like domain
HKJ32_05375	PF00072	Response regulator receiver domain
HKJ32_05390	PF00156	Phosphoribosyl transferase domain
HKJ32_05405	PF02875	Mur ligase family, glutamate ligase domain
HKJ32_05405	PF08245	Mur ligase middle domain
HKJ32_05415	PF01432	Peptidase family M3
HKJ32_05430	PF01625	Peptide methionine sulfoxide reductase
HKJ32_05435	PF00375	Sodium:dicarboxylate symporter family
HKJ32_05440	PF02779	Transketolase, pyrimidine binding domain
HKJ32_05440	PF02780	Transketolase, C-terminal domain
HKJ32_05440	PF00456	Transketolase, thiamine diphosphate binding domain
HKJ32_05445	PF02527	rRNA small subunit methyltransferase G
HKJ32_05450	PF01648	4'-phosphopantetheinyl transferase superfamily
HKJ32_05470	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
HKJ32_05470	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
HKJ32_05475	PF02910	Fumarate reductase flavoprotein C-term
HKJ32_05475	PF00890	FAD binding domain
HKJ32_05480	PF02445	Quinolinate synthetase A protein
HKJ32_05485	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
HKJ32_05485	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
HKJ32_05520	PF00425	chorismate binding enzyme
HKJ32_05520	PF04715	Anthranilate synthase component I, N terminal region
HKJ32_05525	PF01026	TatD related DNase
HKJ32_05540	PF02881	SRP54-type protein, helical bundle domain
HKJ32_05540	PF00448	SRP54-type protein, GTPase domain
HKJ32_05545	PF00730	HhH-GPD superfamily base excision DNA repair protein
HKJ32_05545	PF14815	NUDIX domain
HKJ32_05545	PF00633	Helix-hairpin-helix motif
HKJ32_05550	PF04362	Bacterial Fe(2+) trafficking
HKJ32_05560	PF01709	Transcriptional regulator
HKJ32_05565	PF02075	Crossover junction endodeoxyribonuclease RuvC
HKJ32_05570	PF07499	RuvA, C-terminal domain
HKJ32_05570	PF01330	RuvA N terminal domain
HKJ32_05575	PF02705	K+ potassium transporter
HKJ32_05580	PF05491	RuvB C-terminal winged helix domain
HKJ32_05580	PF05496	Holliday junction DNA helicase RuvB P-loop domain
HKJ32_05580	PF17864	RuvB AAA lid domain
HKJ32_05585	PF03061	Thioesterase superfamily
HKJ32_05590	PF01618	MotA/TolQ/ExbB proton channel family
HKJ32_05595	PF02472	Biopolymer transport protein ExbD/TolR
HKJ32_05605	PF04052	TolB amino-terminal domain
HKJ32_05605	PF07676	WD40-like Beta Propeller Repeat
HKJ32_05610	PF00691	OmpA family
HKJ32_05620	PF04055	Radical SAM superfamily
HKJ32_05625	PF00300	Histidine phosphatase superfamily (branch 1)
HKJ32_05630	PF04493	Endonuclease V
HKJ32_05635	PF00854	POT family
HKJ32_05640	PF00255	Glutathione peroxidase
HKJ32_05645	PF00175	Oxidoreductase NAD-binding domain 
HKJ32_05645	PF00970	Oxidoreductase FAD-binding domain
HKJ32_05650	PF13667	ThiC-associated domain 
HKJ32_05650	PF01964	Radical SAM ThiC family
HKJ32_05655	PF10459	Peptidase S46
HKJ32_05660	PF00300	Histidine phosphatase superfamily (branch 1)
HKJ32_05725	PF00589	Phage integrase family
HKJ32_05740	PF00436	Single-strand binding protein family
HKJ32_05760	PF10065	Uncharacterized conserved protein (DUF2303)
HKJ32_05805	PF18495	Antitoxin VbhA
HKJ32_05810	PF17841	BID domain of Bartonella effector protein (Bep)
HKJ32_05810	PF02661	Fic/DOC family
HKJ32_05845	PF02498	BRO family, N-terminal domain
HKJ32_05845	PF10548	P22AR C-terminal domain
HKJ32_05875	PF00959	Phage lysozyme
HKJ32_05905	PF06381	Protein of unknown function (DUF1073)
HKJ32_05910	PF04233	Phage Mu protein F like protein
HKJ32_05965	PF10876	Phage tail assemb.y chaperone protein, TAC
HKJ32_06005	PF01381	Helix-turn-helix
HKJ32_06010	PF05973	Phage derived protein Gp49-like (DUF891)
HKJ32_06035	PF01381	Helix-turn-helix
HKJ32_06120	PF00589	Phage integrase family
HKJ32_06280	PF06508	Queuosine biosynthesis protein QueC
HKJ32_06285	PF01336	OB-fold nucleic acid binding domain
HKJ32_06285	PF00152	tRNA synthetases class II (D, K and N) 
HKJ32_06285	PF02938	GAD domain
HKJ32_06290	PF05681	Fumarate hydratase (Fumerase)
HKJ32_06290	PF05683	Fumarase C-terminus
HKJ32_06310	PF03797	Autotransporter beta-domain
HKJ32_06310	PF12951	Passenger-associated-transport-repeat
HKJ32_06310	PF00082	Subtilase family
HKJ32_06325	PF00989	PAS fold
HKJ32_06325	PF00512	His Kinase A (phospho-acceptor) domain
HKJ32_06325	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_06330	PF00072	Response regulator receiver domain
HKJ32_06330	PF02954	Bacterial regulatory protein, Fis family
HKJ32_06330	PF00158	Sigma-54 interaction domain
HKJ32_06345	PF00909	Ammonium Transporter Family
HKJ32_06350	PF00543	Nitrogen regulatory protein P-II
HKJ32_06355	PF00120	Glutamine synthetase, catalytic domain
HKJ32_06355	PF03951	Glutamine synthetase, beta-Grasp domain
HKJ32_06360	PF02673	Bacitracin resistance protein BacA
HKJ32_06365	PF04264	YceI-like domain
HKJ32_06470	PF00959	Phage lysozyme
HKJ32_06475	PF01555	DNA methylase
HKJ32_06570	PF02498	BRO family, N-terminal domain
HKJ32_06570	PF10548	P22AR C-terminal domain
HKJ32_06600	PF02899	Phage integrase, N-terminal SAM-like domain
HKJ32_06600	PF00589	Phage integrase family
HKJ32_06615	PF12241	Trans-2-enoyl-CoA reductase catalytic region
HKJ32_06615	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
HKJ32_06615	PF07055	Enoyl reductase FAD binding domain
HKJ32_06625	PF03109	ABC1 family
HKJ32_06635	PF00551	Formyl transferase
HKJ32_06640	PF02492	CobW/HypB/UreG, nucleotide-binding domain
HKJ32_06640	PF07683	Cobalamin synthesis protein cobW C-terminal domain
HKJ32_06650	PF03969	AFG1-like ATPase
HKJ32_06655	PF02566	OsmC-like protein
HKJ32_06660	PF01073	3-beta hydroxysteroid dehydrogenase/isomerase family
HKJ32_06665	PF03572	Peptidase family S41
HKJ32_06665	PF00595	PDZ domain
HKJ32_06665	PF11818	C-terminal domain of tail specific protease (DUF3340)
HKJ32_06665	PF17804	Tail specific protease N-terminal domain
HKJ32_06670	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
HKJ32_06670	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
HKJ32_06675	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
HKJ32_06675	PF00205	Thiamine pyrophosphate enzyme, central domain
HKJ32_06675	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
HKJ32_06685	PF00291	Pyridoxal-phosphate dependent enzyme
HKJ32_06690	PF08502	LeuA allosteric (dimerisation) domain
HKJ32_06690	PF00682	HMGL-like
HKJ32_06695	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
HKJ32_06695	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
HKJ32_06700	PF01783	Ribosomal L32p protein family
HKJ32_06705	PF02620	Large ribosomal RNA subunit accumulation protein YceD
HKJ32_06715	PF17863	AAA lid domain
HKJ32_06715	PF07726	ATPase family associated with various cellular activities (AAA)
HKJ32_06725	PF01841	Transglutaminase-like superfamily
HKJ32_06725	PF13559	Domain of unknown function (DUF4129)
HKJ32_06725	PF11992	Domain of unknown function (DUF3488)
HKJ32_06735	PF01230	HIT domain
HKJ32_06740	PF13662	Toprim domain
HKJ32_06740	PF02132	RecR protein
HKJ32_06745	PF02575	YbaB/EbfC DNA-binding family
HKJ32_06750	PF12170	DNA polymerase III tau subunit V interacting with alpha
HKJ32_06750	PF12168	DNA polymerase III subunits tau domain IV DnaB-binding
HKJ32_06750	PF12169	DNA polymerase III subunits gamma and tau domain III
HKJ32_06780	PF02556	Preprotein translocase subunit SecB
HKJ32_06785	PF00581	Rhodanese-like domain
HKJ32_06810	PF02237	Biotin protein ligase C terminal domain
HKJ32_06810	PF03099	Biotin/lipoate A/B protein ligase family
HKJ32_06810	PF08279	HTH domain
HKJ32_06815	PF03309	Type III pantothenate kinase
HKJ32_06840	PF07963	Prokaryotic N-terminal methylation motif
HKJ32_06855	PF01168	Alanine racemase, N-terminal domain
HKJ32_06860	PF01624	MutS domain I
HKJ32_06860	PF05188	MutS domain II
HKJ32_06860	PF05192	MutS domain III
HKJ32_06860	PF05190	MutS family domain IV
HKJ32_06860	PF00488	MutS domain V
HKJ32_06865	PF00912	Transglycosylase
HKJ32_06870	PF01430	Hsp33 protein
HKJ32_06885	PF01042	Endoribonuclease L-PSP
HKJ32_06890	PF03706	Lysylphosphatidylglycerol synthase TM region
HKJ32_06890	PF09924	Uncharacterised conserved protein (DUF2156)
HKJ32_06900	PF00109	Beta-ketoacyl synthase, N-terminal domain
HKJ32_06900	PF02801	Beta-ketoacyl synthase, C-terminal domain
HKJ32_06910	PF00535	Glycosyl transferase family 2
HKJ32_06925	PF00437	Type II/IV secretion system protein
HKJ32_06930	PF00437	Type II/IV secretion system protein
HKJ32_06945	PF03900	Porphobilinogen deaminase, C-terminal domain
HKJ32_06945	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
HKJ32_06950	PF04397	LytTr DNA-binding domain
HKJ32_06950	PF00072	Response regulator receiver domain
HKJ32_06955	PF06580	Histidine kinase
HKJ32_06955	PF07694	5TMR of 5TMR-LYT
HKJ32_06960	PF02230	Phospholipase/Carboxylesterase
HKJ32_06965	PF13632	Glycosyl transferase family group 2
HKJ32_06980	PF01209	ubiE/COQ5 methyltransferase family
HKJ32_06995	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
HKJ32_07010	PF00294	pfkB family carbohydrate kinase
HKJ32_07015	PF07690	Major Facilitator Superfamily
HKJ32_07025	PF04102	SlyX
HKJ32_07030	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
HKJ32_07030	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
HKJ32_07030	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
HKJ32_07035	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
HKJ32_07035	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
HKJ32_07045	PF00005	ABC transporter
HKJ32_07100	PF05973	Phage derived protein Gp49-like (DUF891)
HKJ32_07105	PF01381	Helix-turn-helix
HKJ32_07115	PF10876	Phage tail assemb.y chaperone protein, TAC
HKJ32_07170	PF04233	Phage Mu protein F like protein
HKJ32_07175	PF06381	Protein of unknown function (DUF1073)
HKJ32_07205	PF00959	Phage lysozyme
HKJ32_07220	PF01541	GIY-YIG catalytic domain
HKJ32_07220	PF02151	UvrB/uvrC motif
HKJ32_07220	PF08459	UvrC Helix-hairpin-helix N-terminal
HKJ32_07225	PF01066	CDP-alcohol phosphatidyltransferase
HKJ32_07250	PF00490	Delta-aminolevulinic acid dehydratase
HKJ32_07255	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
HKJ32_07270	PF00202	Aminotransferase class-III
HKJ32_07275	PF10609	NUBPL iron-transfer P-loop NTPase
HKJ32_07280	PF02348	Cytidylyltransferase
HKJ32_07285	PF01451	Low molecular weight phosphotyrosine protein phosphatase
HKJ32_07330	PF00436	Single-strand binding protein family
HKJ32_07345	PF00005	ABC transporter
HKJ32_07345	PF12848	ABC transporter
HKJ32_07350	PF00593	TonB dependent receptor
HKJ32_07350	PF07715	TonB-dependent Receptor Plug Domain
HKJ32_07360	PF00593	TonB dependent receptor
HKJ32_07360	PF07715	TonB-dependent Receptor Plug Domain
HKJ32_07365	PF02254	TrkA-N domain
HKJ32_07365	PF00999	Sodium/hydrogen exchanger family
HKJ32_07370	PF12849	PBP superfamily domain
HKJ32_07375	PF00528	Binding-protein-dependent transport system inner membrane component
HKJ32_07380	PF00528	Binding-protein-dependent transport system inner membrane component
HKJ32_07385	PF00005	ABC transporter
HKJ32_07390	PF01895	PhoU domain
HKJ32_07395	PF00929	Exonuclease
HKJ32_07400	PF00398	Ribosomal RNA adenine dimethylase
HKJ32_07405	PF04379	ApaG domain 
HKJ32_07410	PF00149	Calcineurin-like phosphoesterase
HKJ32_07430	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
HKJ32_07450	PF00929	Exonuclease
HKJ32_07455	PF00075	RNase H
HKJ32_07465	PF16123	Hydroxyacylglutathione hydrolase C-terminus
HKJ32_07465	PF00753	Metallo-beta-lactamase superfamily
HKJ32_07480	PF00575	S1 RNA binding domain
HKJ32_07480	PF16921	Tex protein YqgF-like domain
HKJ32_07480	PF09371	Tex-like protein N-terminal domain
HKJ32_07480	PF17674	HHH domain
HKJ32_07495	PF00719	Inorganic pyrophosphatase
HKJ32_07500	PF00085	Thioredoxin
HKJ32_07510	PF13603	Leucyl-tRNA synthetase, Domain 2
HKJ32_07510	PF00133	tRNA synthetases class I (I, L, M and V)
HKJ32_07510	PF08264	Anticodon-binding domain of tRNA
HKJ32_07525	PF01467	Cytidylyltransferase-like
HKJ32_07555	PF13406	Transglycosylase SLT domain
HKJ32_07560	PF05036	Sporulation related domain
HKJ32_07560	PF03330	Lytic transglycolase
HKJ32_07670	PF09285	Elongation factor P, C-terminal
HKJ32_07670	PF01132	Elongation factor P (EF-P) OB domain
HKJ32_07670	PF08207	Elongation factor P (EF-P) KOW-like domain
HKJ32_07675	PF01565	FAD binding domain 
HKJ32_07675	PF02913	FAD linked oxidases, C-terminal domain
HKJ32_07680	PF01842	ACT domain
HKJ32_07680	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
HKJ32_07680	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
HKJ32_07685	PF13520	Amino acid permease
HKJ32_07690	PF13520	Amino acid permease
HKJ32_07695	PF00596	Class II Aldolase and Adducin N-terminal domain
HKJ32_07700	PF03079	ARD/ARD' family
HKJ32_07710	PF01502	Phosphoribosyl-AMP cyclohydrolase
HKJ32_07710	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
HKJ32_07715	PF00977	Histidine biosynthesis protein
HKJ32_07720	PF00977	Histidine biosynthesis protein
HKJ32_07725	PF00117	Glutamine amidotransferase class-I
HKJ32_07730	PF00475	Imidazoleglycerol-phosphate dehydratase
HKJ32_07735	PF00155	Aminotransferase class I and II
HKJ32_07740	PF00815	Histidinol dehydrogenase
HKJ32_07745	PF01634	ATP phosphoribosyltransferase
HKJ32_07745	PF08029	HisG, C-terminal domain
HKJ32_07755	PF13393	Histidyl-tRNA synthetase
HKJ32_07755	PF03129	Anticodon binding domain
HKJ32_07765	PF14821	Threonine synthase N terminus
HKJ32_07765	PF00291	Pyridoxal-phosphate dependent enzyme
HKJ32_07770	PF08544	GHMP kinases C terminal 
HKJ32_07770	PF00288	GHMP kinases N terminal domain
HKJ32_07775	PF01842	ACT domain
HKJ32_07775	PF13840	ACT domain 
HKJ32_07775	PF00742	Homoserine dehydrogenase
HKJ32_07775	PF03447	Homoserine dehydrogenase, NAD binding domain
HKJ32_07775	PF00696	Amino acid kinase family
HKJ32_07780	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
HKJ32_07780	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
HKJ32_07785	PF03652	Holliday junction resolvase
HKJ32_07790	PF02622	Uncharacterized ACR, COG1678
HKJ32_07795	PF00768	D-alanyl-D-alanine carboxypeptidase
HKJ32_07795	PF07943	Penicillin-binding protein 5, C-terminal domain
HKJ32_07805	PF00141	Peroxidase
HKJ32_07810	PF01556	DnaJ C terminal domain
HKJ32_07810	PF00226	DnaJ domain
HKJ32_07820	PF06832	Penicillin-Binding Protein C-terminus Family
HKJ32_07820	PF00912	Transglycosylase
HKJ32_07820	PF00905	Penicillin binding protein transpeptidase domain
HKJ32_07830	PF07715	TonB-dependent Receptor Plug Domain
HKJ32_07830	PF00593	TonB dependent receptor
HKJ32_07835	PF04542	Sigma-70 region 2 
HKJ32_07835	PF08281	Sigma-70, region 4
HKJ32_07845	PF13180	PDZ domain
HKJ32_07850	PF00679	Elongation factor G C-terminus
HKJ32_07850	PF03144	Elongation factor Tu domain 2
HKJ32_07850	PF06421	GTP-binding protein LepA C-terminus
HKJ32_07850	PF00009	Elongation factor Tu GTP binding domain
HKJ32_07855	PF10502	Signal peptidase, peptidase S26 
HKJ32_07865	PF00035	Double-stranded RNA binding motif
HKJ32_07865	PF14622	Ribonuclease-III-like
HKJ32_07870	PF07650	KH domain
HKJ32_07870	PF01926	50S ribosome-binding GTPase
HKJ32_07875	PF02565	Recombination protein O C terminal
HKJ32_07875	PF11967	Recombination protein O N terminal
HKJ32_07880	PF02780	Transketolase, C-terminal domain
HKJ32_07880	PF02779	Transketolase, pyrimidine binding domain
HKJ32_07880	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
HKJ32_07885	PF00474	Sodium:solute symporter family
HKJ32_07895	PF13193	AMP-binding enzyme C-terminal domain
HKJ32_07895	PF16177	Acetyl-coenzyme A synthetase N-terminus
HKJ32_07895	PF00501	AMP-binding enzyme
HKJ32_07900	PF02659	Putative manganese efflux pump
HKJ32_07915	PF07676	WD40-like Beta Propeller Repeat
HKJ32_07915	PF00326	Prolyl oligopeptidase family
HKJ32_07915	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
HKJ32_07920	PF03169	OPT oligopeptide transporter protein
HKJ32_07930	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
HKJ32_07930	PF01266	FAD dependent oxidoreductase
HKJ32_07935	PF00230	Major intrinsic protein
HKJ32_07940	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
HKJ32_07940	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
HKJ32_07950	PF01263	Aldose 1-epimerase
HKJ32_07955	PF08267	Cobalamin-independent synthase, N-terminal domain
HKJ32_07955	PF01717	Cobalamin-independent synthase, Catalytic domain
HKJ32_07960	PF02677	Epoxyqueuosine reductase QueH
HKJ32_07965	PF00857	Isochorismatase family
HKJ32_07970	PF00501	AMP-binding enzyme
HKJ32_07980	PF00535	Glycosyl transferase family 2
HKJ32_07985	PF01370	NAD dependent epimerase/dehydratase family
HKJ32_07990	PF02195	ParB-like nuclease domain
HKJ32_07990	PF17762	HTH domain found in ParB protein
HKJ32_07995	PF13614	AAA domain
HKJ32_08005	PF02403	Seryl-tRNA synthetase N-terminal domain
HKJ32_08005	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
HKJ32_08010	PF03544	Gram-negative bacterial TonB protein C-terminal
HKJ32_08050	PF01555	DNA methylase
HKJ32_08055	PF00959	Phage lysozyme
HKJ32_08110	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
HKJ32_08115	PF01842	ACT domain
HKJ32_08115	PF01817	Chorismate mutase type II
HKJ32_08115	PF00800	Prephenate dehydratase
HKJ32_08120	PF00266	Aminotransferase class-V
HKJ32_08130	PF12679	ABC-2 family transporter protein
HKJ32_08135	PF00005	ABC transporter
HKJ32_08145	PF00186	Dihydrofolate reductase
HKJ32_08150	PF00303	Thymidylate synthase
HKJ32_08155	PF01790	Prolipoprotein diacylglyceryl transferase
HKJ32_08160	PF01219	Prokaryotic diacylglycerol kinase
HKJ32_08165	PF00072	Response regulator receiver domain
HKJ32_08165	PF00486	Transcriptional regulatory protein, C terminal
HKJ32_08175	PF01817	Chorismate mutase type II
HKJ32_08175	PF02153	Prephenate dehydrogenase
HKJ32_08180	PF00226	DnaJ domain
HKJ32_08180	PF00684	DnaJ central domain
HKJ32_08180	PF01556	DnaJ C terminal domain
HKJ32_08185	PF00012	Hsp70 protein
HKJ32_08190	PF01025	GrpE
HKJ32_08195	PF03444	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
HKJ32_08195	PF01628	HrcA protein C terminal domain
HKJ32_08200	PF02463	RecF/RecN/SMC N terminal domain
HKJ32_08205	PF01475	Ferric uptake regulator family
HKJ32_08210	PF04355	SmpA / OmlA family
HKJ32_08215	PF03658	RnfH family Ubiquitin
HKJ32_08225	PF01668	SmpB protein
HKJ32_08235	PF00313	'Cold-shock' DNA-binding domain
HKJ32_08240	PF01048	Phosphorylase superfamily
HKJ32_08250	PF00933	Glycosyl hydrolase family 3 N terminal domain
HKJ32_08255	PF01928	CYTH domain
HKJ32_08260	PF05958	tRNA (Uracil-5-)-methyltransferase
HKJ32_08265	PF00486	Transcriptional regulatory protein, C terminal
HKJ32_08265	PF00072	Response regulator receiver domain
HKJ32_08270	PF03808	Glycosyl transferase WecB/TagA/CpsF family
HKJ32_08280	PF14667	Polysaccharide biosynthesis C-terminal domain
HKJ32_08290	PF13439	Glycosyltransferase Family 4
HKJ32_08290	PF00534	Glycosyl transferases group 1
HKJ32_08305	PF02397	Bacterial sugar transferase
HKJ32_08320	PF00180	Isocitrate/isopropylmalate dehydrogenase
HKJ32_08325	PF00694	Aconitase C-terminal domain
HKJ32_08330	PF00330	Aconitase family (aconitate hydratase)
HKJ32_08350	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
HKJ32_08350	PF14489	QueF-like protein
HKJ32_08355	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
HKJ32_08360	PF00873	AcrB/AcrD/AcrF family
HKJ32_08365	PF00873	AcrB/AcrD/AcrF family
HKJ32_08375	PF00107	Zinc-binding dehydrogenase
HKJ32_08375	PF08240	Alcohol dehydrogenase GroES-like domain
HKJ32_08400	PF00462	Glutaredoxin
HKJ32_08405	PF01522	Polysaccharide deacetylase
HKJ32_08425	PF03693	Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH
HKJ32_08435	PF00239	Resolvase, N terminal domain
HKJ32_08435	PF02796	Helix-turn-helix domain of resolvase
HKJ32_08440	PF07282	Putative transposase DNA-binding domain
HKJ32_08440	PF01385	Probable transposase
HKJ32_08440	PF12323	Helix-turn-helix domain
HKJ32_08445	PF00239	Resolvase, N terminal domain
HKJ32_08450	PF00155	Aminotransferase class I and II
HKJ32_08455	PF03412	Peptidase C39 family
HKJ32_08455	PF00005	ABC transporter
HKJ32_08455	PF00664	ABC transporter transmembrane region
HKJ32_08480	PF06594	Haemolysin-type calcium binding protein related domain
HKJ32_08480	PF00353	RTX calcium-binding nonapeptide repeat (4 copies)
HKJ32_08500	PF02401	LytB protein
HKJ32_08505	PF01252	Signal peptidase (SPase) II
HKJ32_08510	PF08264	Anticodon-binding domain of tRNA
HKJ32_08510	PF06827	Zinc finger found in FPG and IleRS
HKJ32_08510	PF00133	tRNA synthetases class I (I, L, M and V)
HKJ32_08515	PF06574	FAD synthetase
HKJ32_08515	PF01687	Riboflavin kinase
HKJ32_08520	PF03023	Lipid II flippase MurJ
HKJ32_08525	PF01649	Ribosomal protein S20
HKJ32_08530	PF01018	GTP1/OBG
HKJ32_08530	PF01926	50S ribosome-binding GTPase
HKJ32_08535	PF01016	Ribosomal L27 protein
HKJ32_08540	PF00829	Ribosomal prokaryotic L21 protein
HKJ32_08545	PF00005	ABC transporter
HKJ32_08545	PF17755	UvrA DNA-binding domain
HKJ32_08545	PF17760	UvrA interaction domain
HKJ32_08555	PF02540	NAD synthase
HKJ32_08555	PF00958	GMP synthase C terminal domain
HKJ32_08555	PF00117	Glutamine amidotransferase class-I
HKJ32_08560	PF00478	IMP dehydrogenase / GMP reductase domain
HKJ32_08560	PF00571	CBS domain
HKJ32_08565	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
HKJ32_08565	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
HKJ32_08570	PF00483	Nucleotidyl transferase
HKJ32_08575	PF02719	Polysaccharide biosynthesis protein
HKJ32_08580	PF00953	Glycosyl transferase family 4
HKJ32_08585	PF18073	Rubredoxin metal binding domain
HKJ32_08595	PF00216	Bacterial DNA-binding protein
HKJ32_08600	PF00575	S1 RNA binding domain
HKJ32_08605	PF02224	Cytidylate kinase
HKJ32_08610	PF00444	Ribosomal protein L36
HKJ32_08620	PF04371	Porphyromonas-type peptidyl-arginine deiminase
HKJ32_08625	PF00795	Carbon-nitrogen hydrolase
HKJ32_08640	PF00528	Binding-protein-dependent transport system inner membrane component
HKJ32_08645	PF00528	Binding-protein-dependent transport system inner membrane component
HKJ32_08665	PF02616	Segregation and condensation protein ScpA
HKJ32_08670	PF04079	Segregation and condensation complex subunit ScpB
HKJ32_08680	PF00849	RNA pseudouridylate synthase
HKJ32_08680	PF01479	S4 domain
HKJ32_08690	PF00795	Carbon-nitrogen hydrolase
HKJ32_08695	PF00155	Aminotransferase class I and II
HKJ32_08700	PF00005	ABC transporter
HKJ32_08705	PF03379	CcmB protein
HKJ32_08710	PF01578	Cytochrome C assembly protein
HKJ32_08720	PF03100	CcmE
HKJ32_08725	PF01578	Cytochrome C assembly protein
HKJ32_08725	PF16327	Cytochrome c-type biogenesis protein CcmF C-terminal
HKJ32_08730	PF08534	Redoxin
HKJ32_08735	PF03918	Cytochrome C biogenesis protein
HKJ32_08750	PF00561	alpha/beta hydrolase fold
HKJ32_08760	PF00295	Glycosyl hydrolases family 28
HKJ32_08775	PF13419	Haloacid dehalogenase-like hydrolase
HKJ32_08785	PF01979	Amidohydrolase family
HKJ32_08790	PF01132	Elongation factor P (EF-P) OB domain
HKJ32_08790	PF09285	Elongation factor P, C-terminal
HKJ32_08790	PF08207	Elongation factor P (EF-P) KOW-like domain
HKJ32_08795	PF04055	Radical SAM superfamily
HKJ32_08800	PF00588	SpoU rRNA Methylase family
HKJ32_08805	PF00459	Inositol monophosphatase family
HKJ32_08830	PF09115	DNA polymerase III, delta subunit, C terminal
HKJ32_08835	PF02618	YceG-like family
HKJ32_08840	PF00425	chorismate binding enzyme
HKJ32_08840	PF04715	Anthranilate synthase component I, N terminal region
HKJ32_08845	PF02801	Beta-ketoacyl synthase, C-terminal domain
HKJ32_08845	PF00109	Beta-ketoacyl synthase, N-terminal domain
HKJ32_08850	PF00550	Phosphopantetheine attachment site
HKJ32_08860	PF00698	Acyl transferase domain
HKJ32_08865	PF00456	Transketolase, thiamine diphosphate binding domain
HKJ32_08865	PF17831	Pyruvate dehydrogenase E1 component middle domain
HKJ32_08870	PF00353	RTX calcium-binding nonapeptide repeat (4 copies)
HKJ32_08870	PF06594	Haemolysin-type calcium binding protein related domain
HKJ32_08900	PF00348	Polyprenyl synthetase
HKJ32_08905	PF02609	Exonuclease VII small subunit
HKJ32_08910	PF01171	PP-loop family
HKJ32_08910	PF09179	TilS substrate binding domain
HKJ32_08910	PF11734	TilS substrate C-terminal domain
HKJ32_08920	PF00245	Alkaline phosphatase
HKJ32_08925	PF00375	Sodium:dicarboxylate symporter family
HKJ32_08935	PF00877	NlpC/P60 family
HKJ32_08940	PF00877	NlpC/P60 family
HKJ32_08945	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
HKJ32_08950	PF04235	Protein of unknown function (DUF418)
HKJ32_08965	PF10576	Iron-sulfur binding domain of endonuclease III
HKJ32_08965	PF00730	HhH-GPD superfamily base excision DNA repair protein
HKJ32_08965	PF00633	Helix-hairpin-helix motif
HKJ32_08975	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
HKJ32_08975	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
HKJ32_08990	PF01555	DNA methylase
HKJ32_09080	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
HKJ32_09080	PF01488	Shikimate / quinate 5-dehydrogenase
HKJ32_09080	PF08501	Shikimate dehydrogenase substrate binding domain
HKJ32_09090	PF08543	Phosphomethylpyrimidine kinase
HKJ32_09090	PF02581	Thiamine monophosphate synthase
HKJ32_09095	PF02683	Cytochrome C biogenesis protein transmembrane region
HKJ32_09095	PF11412	Disulphide bond corrector protein DsbC
HKJ32_09100	PF03091	CutA1 divalent ion tolerance protein
HKJ32_09105	PF00166	Chaperonin 10 Kd subunit
HKJ32_09110	PF00118	TCP-1/cpn60 chaperonin family
HKJ32_09135	PF01370	NAD dependent epimerase/dehydratase family
HKJ32_09140	PF01370	NAD dependent epimerase/dehydratase family
HKJ32_09145	PF16363	GDP-mannose 4,6 dehydratase
HKJ32_09160	PF00291	Pyridoxal-phosphate dependent enzyme
HKJ32_09180	PF07715	TonB-dependent Receptor Plug Domain
HKJ32_09180	PF00593	TonB dependent receptor
HKJ32_09185	PF18331	PKHD-type hydroxylase C-terminal domain
HKJ32_09185	PF13640	2OG-Fe(II) oxygenase superfamily
HKJ32_09205	PF02424	ApbE family
HKJ32_09215	PF01636	Phosphotransferase enzyme family
HKJ32_09220	PF00483	Nucleotidyl transferase
HKJ32_09225	PF00308	Bacterial dnaA  protein
HKJ32_09230	PF01594	AI-2E family transporter
HKJ32_09240	PF02769	AIR synthase related protein, C-terminal domain
HKJ32_09240	PF00586	AIR synthase related protein, N-terminal domain
HKJ32_09245	PF00551	Formyl transferase
HKJ32_09260	PF02223	Thymidylate kinase
HKJ32_09270	PF05649	Peptidase family M13
HKJ32_09270	PF01431	Peptidase family M13
HKJ32_09275	PF07977	FabA-like domain
HKJ32_09280	PF01171	PP-loop family
HKJ32_09285	PF04381	Putative exonuclease, RdgC
HKJ32_09295	PF00762	Ferrochelatase
HKJ32_09305	PF02416	mttA/Hcf106 family
HKJ32_09310	PF02416	mttA/Hcf106 family
HKJ32_09315	PF00902	Sec-independent protein translocase protein (TatC)
HKJ32_09325	PF00958	GMP synthase C terminal domain
HKJ32_09325	PF00117	Glutamine amidotransferase class-I
HKJ32_09340	PF00127	Copper binding proteins, plastocyanin/azurin family
HKJ32_09345	PF03193	RsgA GTPase
HKJ32_09350	PF02021	Uncharacterised protein family UPF0102
HKJ32_09355	PF04348	LppC putative lipoprotein
HKJ32_09360	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
HKJ32_09365	PF00593	TonB dependent receptor
HKJ32_09365	PF07715	TonB-dependent Receptor Plug Domain
HKJ32_09370	PF09334	tRNA synthetases class I (M)
HKJ32_09370	PF01588	Putative tRNA binding domain
HKJ32_09375	PF04060	Putative Fe-S cluster
HKJ32_09430	PF02086	D12 class N6 adenine-specific DNA methyltransferase
HKJ32_09455	PF00114	Pilin (bacterial filament)
HKJ32_09455	PF07963	Prokaryotic N-terminal methylation motif
HKJ32_09460	PF05567	Neisseria PilC beta-propeller domain
HKJ32_09480	PF07963	Prokaryotic N-terminal methylation motif
HKJ32_09480	PF00114	Pilin (bacterial filament)
HKJ32_09485	PF03641	Possible lysine decarboxylase
HKJ32_09485	PF14793	Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases
HKJ32_09485	PF11892	Domain of unknown function (DUF3412)
HKJ32_09490	PF00563	EAL domain
HKJ32_09490	PF12792	CSS motif domain associated with EAL 
HKJ32_09495	PF00899	ThiF family
HKJ32_09500	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
HKJ32_09500	PF01926	50S ribosome-binding GTPase
HKJ32_09505	PF01011	PQQ enzyme repeat
HKJ32_09505	PF13360	PQQ-like domain
HKJ32_09525	PF04055	Radical SAM superfamily
HKJ32_09530	PF00334	Nucleoside diphosphate kinase
HKJ32_09535	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
HKJ32_09535	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
HKJ32_09540	PF00709	Adenylosuccinate synthetase
HKJ32_09550	PF01145	SPFH domain / Band 7 family
HKJ32_09555	PF12221	Bacterial membrane protein N terminal
HKJ32_09555	PF01145	SPFH domain / Band 7 family
HKJ32_09560	PF08240	Alcohol dehydrogenase GroES-like domain
HKJ32_09560	PF00107	Zinc-binding dehydrogenase
HKJ32_09565	PF00072	Response regulator receiver domain
HKJ32_09580	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
HKJ32_09580	PF04073	Aminoacyl-tRNA editing domain
HKJ32_09580	PF03129	Anticodon binding domain
HKJ32_09590	PF01066	CDP-alcohol phosphatidyltransferase
HKJ32_09605	PF01915	Glycosyl hydrolase family 3 C-terminal domain
HKJ32_09605	PF00933	Glycosyl hydrolase family 3 N terminal domain
HKJ32_09605	PF14310	Fibronectin type III-like domain
HKJ32_09610	PF00924	Mechanosensitive ion channel
HKJ32_09615	PF02152	Dihydroneopterin aldolase
HKJ32_09620	PF00814	Glycoprotease family
HKJ32_09625	PF01165	Ribosomal protein S21
HKJ32_09630	PF09424	Yqey-like protein
HKJ32_09635	PF03631	Virulence factor BrkB
HKJ32_09640	PF10410	DnaB-helicase binding domain of primase
HKJ32_09640	PF08278	DNA primase DnaG DnaB-binding 
HKJ32_09640	PF08275	DNA primase catalytic core, N-terminal domain
HKJ32_09640	PF01807	CHC2 zinc finger
HKJ32_09650	PF01555	DNA methylase
HKJ32_09655	PF00579	tRNA synthetases class I (W and Y)
HKJ32_09665	PF13538	UvrD-like helicase C-terminal domain
HKJ32_09675	PF13361	UvrD-like helicase C-terminal domain
HKJ32_09675	PF12705	PD-(D/E)XK nuclease superfamily
HKJ32_09675	PF00580	UvrD/REP helicase N-terminal domain
HKJ32_09680	PF17946	RecC C-terminal domain
HKJ32_09685	PF00005	ABC transporter
HKJ32_09690	PF02405	Permease MlaE
HKJ32_09700	PF05494	MlaC protein
HKJ32_09710	PF04333	MlaA lipoprotein
HKJ32_09720	PF02646	RmuC family
HKJ32_09725	PF00005	ABC transporter
HKJ32_09735	PF13520	Amino acid permease
HKJ32_09740	PF17785	PUA-like domain
HKJ32_09740	PF10672	S-adenosylmethionine-dependent methyltransferase
HKJ32_09745	PF03741	Integral membrane protein TerC family
HKJ32_09750	PF01521	Iron-sulphur cluster biosynthesis
HKJ32_09770	PF00072	Response regulator receiver domain
HKJ32_09770	PF00486	Transcriptional regulatory protein, C terminal
HKJ32_09785	PF00210	Ferritin-like domain
HKJ32_09795	PF00293	NUDIX domain
HKJ32_09810	PF00438	S-adenosylmethionine synthetase, N-terminal domain
HKJ32_09810	PF02773	S-adenosylmethionine synthetase, C-terminal domain
HKJ32_09810	PF02772	S-adenosylmethionine synthetase, central domain
HKJ32_09815	PF08918	PhoQ Sensor
HKJ32_09815	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_09820	PF00072	Response regulator receiver domain
HKJ32_09820	PF00486	Transcriptional regulatory protein, C terminal
HKJ32_09830	PF01207	Dihydrouridine synthase (Dus)
HKJ32_09840	PF01381	Helix-turn-helix
HKJ32_09845	PF00145	C-5 cytosine-specific DNA methylase
HKJ32_09850	PF09015	NgoMIV restriction enzyme
HKJ32_09890	PF09931	Uncharacterized conserved protein (DUF2163)
HKJ32_09890	PF09356	Phage conserved hypothetical protein BR0599
HKJ32_09935	PF00959	Phage lysozyme
HKJ32_09950	PF00574	Clp protease
HKJ32_09980	PF01807	CHC2 zinc finger
HKJ32_09980	PF08275	DNA primase catalytic core, N-terminal domain
HKJ32_09980	PF10410	DnaB-helicase binding domain of primase
HKJ32_09980	PF08278	DNA primase DnaG DnaB-binding 
HKJ32_10000	PF15943	Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT
HKJ32_10075	PF07963	Prokaryotic N-terminal methylation motif
HKJ32_10105	PF07715	TonB-dependent Receptor Plug Domain
HKJ32_10105	PF00593	TonB dependent receptor
HKJ32_10120	PF07724	AAA domain (Cdc48 subfamily)
HKJ32_10120	PF17871	AAA lid domain
HKJ32_10120	PF02861	Clp amino terminal domain, pathogenicity island component
HKJ32_10120	PF00004	ATPase family associated with various cellular activities (AAA)
HKJ32_10120	PF10431	C-terminal, D2-small domain, of ClpB protein 
HKJ32_10125	PF00301	Rubredoxin
HKJ32_10130	PF02581	Thiamine monophosphate synthase
HKJ32_10135	PF00067	Cytochrome P450
HKJ32_10140	PF08019	Phosphoethanolamine transferase EptA/EptB
HKJ32_10140	PF00884	Sulfatase
HKJ32_10175	PF00905	Penicillin binding protein transpeptidase domain
HKJ32_10175	PF17092	Penicillin-binding protein OB-like domain
HKJ32_10175	PF00912	Transglycosylase
HKJ32_10180	PF00248	Aldo/keto reductase family
HKJ32_10185	PF00294	pfkB family carbohydrate kinase
HKJ32_10190	PF05736	OprF membrane domain
HKJ32_10190	PF00691	OmpA family
HKJ32_10195	PF00772	DnaB-like helicase N terminal domain
HKJ32_10195	PF03796	DnaB-like helicase C terminal domain
HKJ32_10205	PF00067	Cytochrome P450
HKJ32_10215	PF00271	Helicase conserved C-terminal domain
HKJ32_10215	PF17191	RecG wedge domain
HKJ32_10215	PF00270	DEAD/DEAH box helicase
HKJ32_10220	PF01042	Endoribonuclease L-PSP
HKJ32_10225	PF02824	TGS domain
HKJ32_10225	PF04607	Region found in RelA / SpoT proteins
HKJ32_10225	PF13291	ACT domain
HKJ32_10230	PF01565	FAD binding domain 
HKJ32_10230	PF02913	FAD linked oxidases, C-terminal domain
HKJ32_10235	PF00691	OmpA family
HKJ32_10235	PF05736	OprF membrane domain
HKJ32_10240	PF02600	Disulfide bond formation protein DsbB
HKJ32_10245	PF07715	TonB-dependent Receptor Plug Domain
HKJ32_10245	PF00593	TonB dependent receptor
HKJ32_10250	PF02590	Predicted SPOUT methyltransferase
HKJ32_10305	PF00271	Helicase conserved C-terminal domain
HKJ32_10305	PF12344	Ultra-violet resistance protein B
HKJ32_10305	PF17757	UvrB interaction domain
HKJ32_10305	PF02151	UvrB/uvrC motif
HKJ32_10305	PF04851	Type III restriction enzyme, res subunit
HKJ32_10320	PF00701	Dihydrodipicolinate synthetase family
HKJ32_10330	PF00578	AhpC/TSA family
HKJ32_10350	PF00586	AIR synthase related protein, N-terminal domain
HKJ32_10350	PF02769	AIR synthase related protein, C-terminal domain
HKJ32_10355	PF01029	NusB family
HKJ32_10360	PF00885	6,7-dimethyl-8-ribityllumazine synthase
HKJ32_10365	PF00925	GTP cyclohydrolase II
HKJ32_10365	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
HKJ32_10370	PF00677	Lumazine binding domain
HKJ32_10380	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
HKJ32_10380	PF01872	RibD C-terminal domain
HKJ32_10385	PF03477	ATP cone domain
HKJ32_10395	PF00464	Serine hydroxymethyltransferase
HKJ32_10400	PF12848	ABC transporter
HKJ32_10400	PF00005	ABC transporter
HKJ32_10405	PF06039	Malate:quinone oxidoreductase (Mqo)
HKJ32_10410	PF04134	Protein of unknown function, DUF393
HKJ32_10420	PF01479	S4 domain
HKJ32_10420	PF00849	RNA pseudouridylate synthase
HKJ32_10425	PF13525	Outer membrane lipoprotein
HKJ32_10435	PF02421	Ferrous iron transport protein B
HKJ32_10435	PF07670	Nucleoside recognition
HKJ32_10435	PF07664	Ferrous iron transport protein B C terminus
HKJ32_10445	PF02366	Dolichyl-phosphate-mannose-protein mannosyltransferase  
HKJ32_10450	PF01189	16S rRNA methyltransferase RsmB/F
HKJ32_10450	PF01029	NusB family
HKJ32_10455	PF02911	Formyl transferase, C-terminal domain
HKJ32_10455	PF00551	Formyl transferase
HKJ32_10460	PF01327	Polypeptide deformylase
HKJ32_10470	PF17782	DprA winged helix domain
HKJ32_10470	PF02481	DNA recombination-mediator protein A
HKJ32_10475	PF04361	Protein of unknown function (DUF494)
HKJ32_10480	PF01131	DNA topoisomerase
HKJ32_10480	PF01751	Toprim domain
HKJ32_10480	PF13368	Topoisomerase C-terminal repeat
HKJ32_10485	PF01300	Telomere recombination
HKJ32_10515	PF04386	Stringent starvation protein B
HKJ32_10520	PF02798	Glutathione S-transferase, N-terminal domain
HKJ32_10520	PF00043	Glutathione S-transferase, C-terminal domain
HKJ32_10525	PF02167	Cytochrome C1 family
HKJ32_10530	PF00033	Cytochrome b/b6/petB
HKJ32_10530	PF00032	Cytochrome b(C-terminal)/b6/petD
HKJ32_10535	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
HKJ32_10535	PF00355	Rieske [2Fe-2S] domain
HKJ32_10540	PF01464	Transglycosylase SLT domain
HKJ32_10545	PF00919	Uncharacterized protein family UPF0004
HKJ32_10545	PF01938	TRAM domain
HKJ32_10545	PF04055	Radical SAM superfamily
HKJ32_10550	PF02562	PhoH-like protein
HKJ32_10555	PF02130	Uncharacterized protein family UPF0054
HKJ32_10565	PF00571	CBS domain
HKJ32_10565	PF03471	Transporter associated domain
HKJ32_10575	PF01544	CorA-like Mg2+ transporter protein
HKJ32_10640	PF14814	Bifunctional transglycosylase second domain
HKJ32_10640	PF00905	Penicillin binding protein transpeptidase domain
HKJ32_10640	PF00912	Transglycosylase
HKJ32_10650	PF04851	Type III restriction enzyme, res subunit
HKJ32_10650	PF13307	Helicase C-terminal domain
HKJ32_10660	PF00484	Carbonic anhydrase
HKJ32_10670	PF01522	Polysaccharide deacetylase
HKJ32_10680	PF09383	NIL domain
HKJ32_10680	PF00005	ABC transporter
HKJ32_10685	PF00528	Binding-protein-dependent transport system inner membrane component
HKJ32_10690	PF03180	NLPA lipoprotein
HKJ32_10705	PF00364	Biotin-requiring enzyme
HKJ32_10705	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
HKJ32_10705	PF02817	e3 binding domain
HKJ32_10710	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HKJ32_10710	PF07992	Pyridine nucleotide-disulphide oxidoreductase
HKJ32_10720	PF01545	Cation efflux family
HKJ32_10725	PF01053	Cys/Met metabolism PLP-dependent enzyme
HKJ32_10730	PF00561	alpha/beta hydrolase fold
HKJ32_10735	PF01551	Peptidase family M23
HKJ32_10750	PF01975	Survival protein SurE
HKJ32_10760	PF09335	SNARE associated Golgi protein
HKJ32_10765	PF01476	LysM domain
HKJ32_10765	PF01551	Peptidase family M23
HKJ32_10775	PF00512	His Kinase A (phospho-acceptor) domain
HKJ32_10775	PF00989	PAS fold
HKJ32_10775	PF16736	Single Cache-like 
HKJ32_10775	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_10780	PF00842	Alanine racemase, C-terminal domain
HKJ32_10780	PF01168	Alanine racemase, N-terminal domain
HKJ32_10785	PF01266	FAD dependent oxidoreductase
HKJ32_10790	PF01641	SelR domain
HKJ32_10795	PF01476	LysM domain
HKJ32_10795	PF00704	Glycosyl hydrolases family 18
HKJ32_10800	PF00728	Glycosyl hydrolase family 20, catalytic domain
HKJ32_10800	PF02838	Glycosyl hydrolase family 20, domain 2
HKJ32_10800	PF07691	PA14 domain
HKJ32_10810	PF07691	PA14 domain
HKJ32_10810	PF00933	Glycosyl hydrolase family 3 N terminal domain
HKJ32_10810	PF14310	Fibronectin type III-like domain
HKJ32_10810	PF01915	Glycosyl hydrolase family 3 C-terminal domain
HKJ32_10825	PF07971	Glycosyl hydrolase family 92
HKJ32_10825	PF17678	Glycosyl hydrolase family 92 N-terminal domain
HKJ32_10830	PF01301	Glycosyl hydrolases family 35
HKJ32_10835	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
HKJ32_10840	PF00639	PPIC-type PPIASE domain
HKJ32_10840	PF09312	SurA N-terminal domain
HKJ32_10845	PF04453	LPS transport system D
HKJ32_10845	PF03968	OstA-like protein
HKJ32_10855	PF01494	FAD binding domain
HKJ32_10860	PF01494	FAD binding domain
HKJ32_10870	PF03466	LysR substrate binding domain
HKJ32_10870	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
HKJ32_10875	PF10414	Sirohaem synthase dimerisation region
HKJ32_10875	PF14824	Sirohaem biosynthesis protein central
HKJ32_10875	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
HKJ32_10880	PF00291	Pyridoxal-phosphate dependent enzyme
HKJ32_10905	PF00274	Fructose-bisphosphate aldolase class-I
HKJ32_10910	PF00224	Pyruvate kinase, barrel domain
HKJ32_10910	PF02887	Pyruvate kinase, alpha/beta domain
HKJ32_10920	PF00162	Phosphoglycerate kinase
HKJ32_10925	PF00749	tRNA synthetases class I (E and Q), catalytic domain
HKJ32_10930	PF01475	Ferric uptake regulator family
HKJ32_10940	PF00553	Cellulose binding domain
HKJ32_10940	PF00150	Cellulase (glycosyl hydrolase family 5)
HKJ32_10950	PF05193	Peptidase M16 inactive domain
HKJ32_10950	PF00675	Insulinase (Peptidase family M16)
HKJ32_10970	PF03330	Lytic transglycolase
HKJ32_10975	PF07517	SecA DEAD-like domain
HKJ32_10975	PF01043	SecA preprotein cross-linking domain
HKJ32_10975	PF07516	SecA Wing and Scaffold domain
HKJ32_10975	PF02810	SEC-C motif
HKJ32_10980	PF01476	LysM domain
HKJ32_10980	PF01551	Peptidase family M23
HKJ32_10980	PF08525	Opacity-associated protein A N-terminal motif
HKJ32_10990	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
HKJ32_10995	PF12327	FtsZ family, C-terminal domain
HKJ32_10995	PF00091	Tubulin/FtsZ family, GTPase domain
HKJ32_11000	PF02491	SHS2 domain inserted in FTSA
HKJ32_11005	PF03799	Cell division protein FtsQ
HKJ32_11005	PF08478	POTRA domain, FtsQ-type
HKJ32_11010	PF01820	D-ala D-ala ligase N-terminus
HKJ32_11010	PF07478	D-ala D-ala ligase C-terminus
HKJ32_11015	PF01225	Mur ligase family, catalytic domain
HKJ32_11015	PF08245	Mur ligase middle domain
HKJ32_11015	PF02875	Mur ligase family, glutamate ligase domain
HKJ32_11020	PF04101	Glycosyltransferase family 28 C-terminal domain
HKJ32_11020	PF03033	Glycosyltransferase family 28 N-terminal domain
HKJ32_11025	PF01098	Cell cycle protein
HKJ32_11030	PF00953	Glycosyl transferase family 4
HKJ32_11035	PF02875	Mur ligase family, glutamate ligase domain
HKJ32_11035	PF01225	Mur ligase family, catalytic domain
HKJ32_11035	PF08245	Mur ligase middle domain
HKJ32_11040	PF02875	Mur ligase family, glutamate ligase domain
HKJ32_11040	PF01225	Mur ligase family, catalytic domain
HKJ32_11040	PF08245	Mur ligase middle domain
HKJ32_11045	PF03717	Penicillin-binding Protein dimerisation domain
HKJ32_11045	PF00905	Penicillin binding protein transpeptidase domain
HKJ32_11050	PF04999	Cell division protein FtsL
HKJ32_11055	PF01795	MraW methylase family
HKJ32_11060	PF02381	MraZ protein, putative antitoxin-like
HKJ32_11070	PF02080	TrkA-C domain
HKJ32_11070	PF03600	Citrate transporter
HKJ32_11075	PF02390	Putative methyltransferase 
HKJ32_11080	PF05690	Thiazole biosynthesis protein ThiG
HKJ32_11085	PF05690	Thiazole biosynthesis protein ThiG
HKJ32_11085	PF02597	ThiS family
HKJ32_11125	PF07977	FabA-like domain
HKJ32_11160	PF04143	Sulphur transport
HKJ32_11170	PF01925	Sulfite exporter TauE/SafE
HKJ32_11175	PF00692	dUTPase
HKJ32_11185	PF01119	DNA mismatch repair protein, C-terminal domain
HKJ32_11185	PF08676	MutL C terminal dimerisation domain
HKJ32_11190	PF01520	N-acetylmuramoyl-L-alanine amidase
HKJ32_11190	PF11741	AMIN domain
HKJ32_11195	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
HKJ32_11200	PF01256	Carbohydrate kinase
HKJ32_11200	PF03853	YjeF-related protein N-terminus
HKJ32_11205	PF13742	OB-fold nucleic acid binding domain
HKJ32_11205	PF02601	Exonuclease VII, large subunit
HKJ32_11220	PF01612	3'-5' exonuclease
HKJ32_11220	PF00570	HRDC domain
HKJ32_11230	PF18125	RlmM ferredoxin-like domain
HKJ32_11230	PF01728	FtsJ-like methyltransferase
HKJ32_11250	PF00216	Bacterial DNA-binding protein
HKJ32_11255	PF03484	tRNA synthetase B5 domain
HKJ32_11255	PF03483	B3/4 domain
HKJ32_11255	PF01588	Putative tRNA binding domain
HKJ32_11255	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
HKJ32_11255	PF03147	Ferredoxin-fold anticodon binding domain
HKJ32_11260	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
HKJ32_11260	PF01409	tRNA synthetases class II core domain (F)
HKJ32_11265	PF00453	Ribosomal protein L20
HKJ32_11270	PF01632	Ribosomal protein L35
HKJ32_11275	PF05198	Translation initiation factor IF-3, N-terminal domain
HKJ32_11275	PF00707	Translation initiation factor IF-3, C-terminal domain
HKJ32_11280	PF02824	TGS domain
HKJ32_11280	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
HKJ32_11280	PF03129	Anticodon binding domain
HKJ32_11280	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
HKJ32_11295	PF18030	RimK PreATP-grasp domain
HKJ32_11295	PF08443	RimK-like ATP-grasp domain
HKJ32_11300	PF00072	Response regulator receiver domain
HKJ32_11300	PF00486	Transcriptional regulatory protein, C terminal
HKJ32_11305	PF00512	His Kinase A (phospho-acceptor) domain
HKJ32_11305	PF00672	HAMP domain
HKJ32_11305	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_11310	PF01121	Dephospho-CoA kinase
HKJ32_11315	PF01478	Type IV leader peptidase family
HKJ32_11315	PF06750	Bacterial Peptidase A24 N-terminal domain
HKJ32_11320	PF00482	Type II secretion system (T2SS), protein F
HKJ32_11325	PF07963	Prokaryotic N-terminal methylation motif
HKJ32_11325	PF00114	Pilin (bacterial filament)
HKJ32_11335	PF00114	Pilin (bacterial filament)
HKJ32_11335	PF07963	Prokaryotic N-terminal methylation motif
HKJ32_11340	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
HKJ32_11340	PF00437	Type II/IV secretion system protein
HKJ32_11345	PF00158	Sigma-54 interaction domain
HKJ32_11345	PF00072	Response regulator receiver domain
HKJ32_11345	PF02954	Bacterial regulatory protein, Fis family
HKJ32_11350	PF00512	His Kinase A (phospho-acceptor) domain
HKJ32_11350	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_11355	PF08442	ATP-grasp domain
HKJ32_11355	PF00549	CoA-ligase
HKJ32_11360	PF02629	CoA binding domain
HKJ32_11360	PF00549	CoA-ligase
HKJ32_11370	PF17287	POTRA domain
HKJ32_11370	PF08479	POTRA domain, ShlB-type
HKJ32_11370	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
HKJ32_11380	PF03989	DNA gyrase C-terminal domain, beta-propeller
HKJ32_11380	PF00521	DNA gyrase/topoisomerase IV, subunit A
HKJ32_11385	PF01008	Initiation factor 2 subunit family
HKJ32_11395	PF00152	tRNA synthetases class II (D, K and N) 
HKJ32_11405	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
HKJ32_11405	PF12826	Helix-hairpin-helix motif
HKJ32_11405	PF03120	NAD-dependent DNA ligase OB-fold domain
HKJ32_11405	PF01653	NAD-dependent DNA ligase adenylation domain
HKJ32_11405	PF00533	BRCA1 C Terminus (BRCT) domain
HKJ32_11410	PF04354	ZipA, C-terminal FtsZ-binding domain
HKJ32_11415	PF02463	RecF/RecN/SMC N terminal domain
HKJ32_11420	PF03948	Ribosomal protein L9, C-terminal domain
HKJ32_11420	PF01281	Ribosomal protein L9, N-terminal domain
HKJ32_11425	PF01084	Ribosomal protein S18
HKJ32_11430	PF01250	Ribosomal protein S6
HKJ32_11435	PF01521	Iron-sulphur cluster biosynthesis
HKJ32_11440	PF01336	OB-fold nucleic acid binding domain
HKJ32_11440	PF00152	tRNA synthetases class II (D, K and N) 
HKJ32_11445	PF01061	ABC-2 type transporter
HKJ32_11450	PF00005	ABC transporter
HKJ32_11460	PF01180	Dihydroorotate dehydrogenase
HKJ32_11465	PF01565	FAD binding domain 
HKJ32_11465	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
HKJ32_11470	PF00892	EamA-like transporter family
HKJ32_11475	PF01569	PAP2 superfamily
HKJ32_11480	PF04551	GcpE protein
HKJ32_11490	PF00072	Response regulator receiver domain
HKJ32_11495	PF00889	Elongation factor TS
HKJ32_11500	PF00318	Ribosomal protein S2
HKJ32_11510	PF00664	ABC transporter transmembrane region
HKJ32_11510	PF00005	ABC transporter
HKJ32_11525	PF02321	Outer membrane efflux protein
HKJ32_11530	PF00149	Calcineurin-like phosphoesterase
HKJ32_11540	PF02541	Ppx/GppA phosphatase family
HKJ32_11545	PF17941	Polyphosphate kinase C-terminal domain 1
HKJ32_11545	PF13090	Polyphosphate kinase C-terminal domain 2
HKJ32_11545	PF02503	Polyphosphate kinase middle domain
HKJ32_11545	PF13089	Polyphosphate kinase N-terminal domain
HKJ32_11550	PF00512	His Kinase A (phospho-acceptor) domain
HKJ32_11550	PF11808	Phosphate regulon sensor protein PhoR
HKJ32_11550	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HKJ32_11550	PF00989	PAS fold
HKJ32_11555	PF00486	Transcriptional regulatory protein, C terminal
HKJ32_11555	PF00072	Response regulator receiver domain
HKJ32_11560	PF13181	Tetratricopeptide repeat
HKJ32_11560	PF01435	Peptidase family M48
HKJ32_11565	PF00462	Glutaredoxin
HKJ32_11570	PF00180	Isocitrate/isopropylmalate dehydrogenase
HKJ32_11570	PF18324	Hypothetical protein TT1725
HKJ32_11580	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
HKJ32_11580	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
HKJ32_11585	PF11893	Domain of unknown function (DUF3413)
HKJ32_11585	PF00884	Sulfatase
HKJ32_11590	PF00037	4Fe-4S binding domain
HKJ32_11590	PF11953	Domain of unknown function (DUF3470)
HKJ32_11600	PF01106	NifU-like domain
HKJ32_11605	PF01329	Pterin 4 alpha carbinolamine dehydratase
HKJ32_11615	PF00849	RNA pseudouridylate synthase
HKJ32_11615	PF01479	S4 domain
HKJ32_11620	PF12111	Polyribonucleotide phosphorylase C terminal
HKJ32_11620	PF10150	Ribonuclease E/G family
HKJ32_11620	PF00575	S1 RNA binding domain
HKJ32_11640	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
HKJ32_11640	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
HKJ32_11645	PF00545	ribonuclease
HKJ32_11665	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
HKJ32_11670	PF00313	'Cold-shock' DNA-binding domain
HKJ32_11675	PF00563	EAL domain
HKJ32_11675	PF01590	GAF domain
HKJ32_11675	PF00990	Diguanylate cyclase, GGDEF domain
HKJ32_11675	PF00360	Phytochrome region
HKJ32_11680	PF01435	Peptidase family M48
HKJ32_11685	PF03144	Elongation factor Tu domain 2
HKJ32_11685	PF03143	Elongation factor Tu C-terminal domain
HKJ32_11685	PF00009	Elongation factor Tu GTP binding domain
HKJ32_11690	PF14492	Elongation Factor G, domain II
HKJ32_11690	PF03144	Elongation factor Tu domain 2
HKJ32_11690	PF00009	Elongation factor Tu GTP binding domain
HKJ32_11690	PF03764	Elongation factor G, domain IV
HKJ32_11690	PF00679	Elongation factor G C-terminus
HKJ32_11695	PF00177	Ribosomal protein S7p/S5e
HKJ32_11700	PF00164	Ribosomal protein S12/S23
HKJ32_11705	PF04983	RNA polymerase Rpb1, domain 3
HKJ32_11705	PF05000	RNA polymerase Rpb1, domain 4
HKJ32_11705	PF00623	RNA polymerase Rpb1, domain 2
HKJ32_11705	PF04997	RNA polymerase Rpb1, domain 1
HKJ32_11705	PF04998	RNA polymerase Rpb1, domain 5
HKJ32_11710	PF04561	RNA polymerase Rpb2, domain 2
HKJ32_11710	PF04565	RNA polymerase Rpb2, domain 3
HKJ32_11710	PF10385	RNA polymerase beta subunit external 1 domain
HKJ32_11710	PF00562	RNA polymerase Rpb2, domain 6
HKJ32_11710	PF04560	RNA polymerase Rpb2, domain 7
HKJ32_11710	PF04563	RNA polymerase beta subunit
HKJ32_11715	PF16320	Ribosomal protein L7/L12 dimerisation domain
HKJ32_11715	PF00542	Ribosomal protein L7/L12 C-terminal domain
HKJ32_11720	PF00466	Ribosomal protein L10
HKJ32_11725	PF00687	Ribosomal protein L1p/L10e family
HKJ32_11730	PF03946	Ribosomal protein L11, N-terminal domain
HKJ32_11730	PF00298	Ribosomal protein L11, RNA binding domain
HKJ32_11735	PF02357	Transcription termination factor nusG
HKJ32_11735	PF00467	KOW motif
HKJ32_11740	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
HKJ32_11750	PF00009	Elongation factor Tu GTP binding domain
HKJ32_11750	PF03143	Elongation factor Tu C-terminal domain
HKJ32_11750	PF03144	Elongation factor Tu domain 2
HKJ32_11770	PF01926	50S ribosome-binding GTPase
HKJ32_11770	PF06071	Protein of unknown function (DUF933)
HKJ32_11775	PF01195	Peptidyl-tRNA hydrolase
HKJ32_11780	PF01386	Ribosomal L25p family
HKJ32_11780	PF14693	Ribosomal protein TL5, C-terminal domain
HKJ32_11785	PF14572	Phosphoribosyl synthetase-associated domain
HKJ32_11785	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
HKJ32_11795	PF00288	GHMP kinases N terminal domain
HKJ32_11795	PF08544	GHMP kinases C terminal 
HKJ32_11800	PF03550	Outer membrane lipoprotein LolB
HKJ32_11810	PF01488	Shikimate / quinate 5-dehydrogenase
HKJ32_11810	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
HKJ32_11810	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
HKJ32_11815	PF03462	PCRF domain
HKJ32_11815	PF00472	RF-1 domain
HKJ32_11825	PF01170	Putative RNA methylase family UPF0020
HKJ32_11825	PF10672	S-adenosylmethionine-dependent methyltransferase
HKJ32_11825	PF02926	THUMP domain
HKJ32_11860	PF01914	MarC family integral membrane protein
HKJ32_11865	PF00462	Glutaredoxin
HKJ32_11870	PF02222	ATP-grasp domain
HKJ32_11870	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
HKJ32_11875	PF00731	AIR carboxylase
HKJ32_11895	PF07732	Multicopper oxidase
HKJ32_11895	PF07731	Multicopper oxidase
HKJ32_11905	PF00580	UvrD/REP helicase N-terminal domain
HKJ32_11905	PF13361	UvrD-like helicase C-terminal domain
HKJ32_11910	PF04349	Periplasmic glucan biosynthesis protein, MdoG
HKJ32_11915	PF01343	Peptidase family S49
HKJ32_11920	PF01554	MatE
HKJ32_11935	PF18074	Primosomal protein N C-terminal domain
HKJ32_11935	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
HKJ32_11935	PF00270	DEAD/DEAH box helicase
HKJ32_11935	PF00271	Helicase conserved C-terminal domain
HKJ32_11935	PF17764	3′ DNA-binding domain (3′BD)
HKJ32_11940	PF04545	Sigma-70, region 4
HKJ32_11940	PF04542	Sigma-70 region 2 
HKJ32_11945	PF03167	Uracil DNA glycosylase superfamily
HKJ32_11950	PF01339	CheB methylesterase
HKJ32_11950	PF00072	Response regulator receiver domain
HKJ32_11955	PF18075	FtsX extracellular domain
HKJ32_11960	PF00005	ABC transporter
HKJ32_11965	PF12300	ATP-dependent RNA helicase RhlB 
HKJ32_11965	PF00271	Helicase conserved C-terminal domain
HKJ32_11965	PF00270	DEAD/DEAH box helicase
HKJ32_11970	PF00085	Thioredoxin
HKJ32_11975	PF07498	Rho termination factor, N-terminal domain
HKJ32_11975	PF07497	Rho termination factor, RNA-binding domain
HKJ32_11975	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
HKJ32_11980	PF03971	Monomeric isocitrate dehydrogenase
HKJ32_11990	PF13180	PDZ domain
HKJ32_11990	PF03572	Peptidase family S41
HKJ32_11995	PF01551	Peptidase family M23
HKJ32_12010	PF00150	Cellulase (glycosyl hydrolase family 5)
HKJ32_12015	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
HKJ32_12015	PF07992	Pyridine nucleotide-disulphide oxidoreductase
HKJ32_12020	PF00310	Glutamine amidotransferases class-II
HKJ32_12020	PF04898	Glutamate synthase central domain
HKJ32_12020	PF01645	Conserved region in glutamate synthase
HKJ32_12020	PF01493	GXGXG motif
HKJ32_12025	PF14748	Pyrroline-5-carboxylate reductase dimerisation
HKJ32_12025	PF03807	NADP oxidoreductase coenzyme F420-dependent
HKJ32_12070	PF11867	Domain of unknown function (DUF3387)
HKJ32_12070	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
HKJ32_12070	PF18766	SWI2/SNF2 ATPase
HKJ32_12080	PF12161	HsdM N-terminal domain
HKJ32_12080	PF02384	N-6 DNA Methylase
HKJ32_12090	PF12008	Type I restriction and modification enzyme - subunit R C terminal
HKJ32_12090	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
HKJ32_12090	PF18766	SWI2/SNF2 ATPase
HKJ32_12110	PF02384	N-6 DNA Methylase
HKJ32_12110	PF12161	HsdM N-terminal domain
HKJ32_12115	PF01810	LysE type translocator
HKJ32_12130	PF11855	Protein of unknown function (DUF3375)
HKJ32_12165	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
HKJ32_12165	PF18766	SWI2/SNF2 ATPase
HKJ32_12165	PF11867	Domain of unknown function (DUF3387)
HKJ32_12180	PF02384	N-6 DNA Methylase
HKJ32_12245	PF06594	Haemolysin-type calcium binding protein related domain
HKJ32_12245	PF00353	RTX calcium-binding nonapeptide repeat (4 copies)
HKJ32_12290	PF01850	PIN domain
HKJ32_12370	PF01926	50S ribosome-binding GTPase
HKJ32_12370	PF10396	GTP-binding protein TrmE N-terminus
HKJ32_12370	PF12631	MnmE helical domain
HKJ32_12380	PF02096	60Kd inner membrane protein
HKJ32_12380	PF14849	YidC periplasmic domain
HKJ32_12385	PF00825	Ribonuclease P
HKJ32_12390	PF00468	Ribosomal protein L34
