locus-tag class description HKJ33_00005 PF00308 Bacterial dnaA protein HKJ33_00005 PF08299 Bacterial dnaA protein helix-turn-helix HKJ33_00005 PF11638 DnaA N-terminal domain HKJ33_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HKJ33_00010 PF02767 DNA polymerase III beta subunit, central domain HKJ33_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HKJ33_00015 PF02463 RecF/RecN/SMC N terminal domain HKJ33_00020 PF00204 DNA gyrase B HKJ33_00020 PF01751 Toprim domain HKJ33_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_00020 PF18053 DNA gyrase B subunit insert domain HKJ33_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HKJ33_00030 PF01435 Peptidase family M48 HKJ33_00040 PF03544 Gram-negative bacterial TonB protein C-terminal HKJ33_00045 PF01618 MotA/TolQ/ExbB proton channel family HKJ33_00050 PF02472 Biopolymer transport protein ExbD/TolR HKJ33_00055 PF02472 Biopolymer transport protein ExbD/TolR HKJ33_00070 PF01218 Coproporphyrinogen III oxidase HKJ33_00090 PF00793 DAHP synthetase I family HKJ33_00115 PF05567 Neisseria PilC beta-propeller domain HKJ33_00125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HKJ33_00130 PF00155 Aminotransferase class I and II HKJ33_00135 PF01741 Large-conductance mechanosensitive channel, MscL HKJ33_00155 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HKJ33_00165 PF00270 DEAD/DEAH box helicase HKJ33_00165 PF03461 TRCF domain HKJ33_00165 PF02559 CarD-like/TRCF domain HKJ33_00165 PF00271 Helicase conserved C-terminal domain HKJ33_00165 PF17757 UvrB interaction domain HKJ33_00170 PF01220 Dehydroquinase class II HKJ33_00175 PF00364 Biotin-requiring enzyme HKJ33_00180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKJ33_00180 PF00289 Biotin carboxylase, N-terminal domain HKJ33_00180 PF02785 Biotin carboxylase C-terminal domain HKJ33_00185 PF13361 UvrD-like helicase C-terminal domain HKJ33_00185 PF00580 UvrD/REP helicase N-terminal domain HKJ33_00190 PF00970 Oxidoreductase FAD-binding domain HKJ33_00190 PF00175 Oxidoreductase NAD-binding domain HKJ33_00190 PF00042 Globin HKJ33_00200 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HKJ33_00205 PF02195 ParB-like nuclease domain HKJ33_00205 PF08535 KorB domain HKJ33_00205 PF06613 KorB C-terminal beta-barrel domain HKJ33_00210 PF00156 Phosphoribosyl transferase domain HKJ33_00215 PF06968 Biotin and Thiamin Synthesis associated domain HKJ33_00215 PF04055 Radical SAM superfamily HKJ33_00220 PF01734 Patatin-like phospholipase HKJ33_00225 PF01040 UbiA prenyltransferase family HKJ33_00260 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HKJ33_00260 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HKJ33_00265 PF01578 Cytochrome C assembly protein HKJ33_00270 PF02881 SRP54-type protein, helical bundle domain HKJ33_00270 PF02978 Signal peptide binding domain HKJ33_00270 PF00448 SRP54-type protein, GTPase domain HKJ33_00285 PF00419 Fimbrial protein HKJ33_00290 PF13954 PapC N-terminal domain HKJ33_00290 PF13953 PapC C-terminal domain HKJ33_00290 PF00577 Outer membrane usher protein HKJ33_00295 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HKJ33_00295 PF02753 Pili assembly chaperone PapD, C-terminal domain HKJ33_00300 PF16970 Type-1 fimbrial protein, A HKJ33_00305 PF02464 Competence-damaged protein HKJ33_00310 PF00083 Sugar (and other) transporter HKJ33_00315 PF01926 50S ribosome-binding GTPase HKJ33_00315 PF13167 GTP-binding GTPase N-terminal HKJ33_00315 PF16360 GTP-binding GTPase Middle Region HKJ33_00320 PF17209 Hfq protein HKJ33_00330 PF00809 Pterin binding enzyme HKJ33_00340 PF01434 Peptidase family M41 HKJ33_00340 PF17862 AAA+ lid domain HKJ33_00340 PF00004 ATPase family associated with various cellular activities (AAA) HKJ33_00340 PF06480 FtsH Extracellular HKJ33_00345 PF01728 FtsJ-like methyltransferase HKJ33_00350 PF01985 CRS1 / YhbY (CRM) domain HKJ33_00360 PF00920 Dehydratase family HKJ33_00380 PF03279 Bacterial lipid A biosynthesis acyltransferase HKJ33_00385 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HKJ33_00395 PF00886 Ribosomal protein S16 HKJ33_00400 PF01782 RimM N-terminal domain HKJ33_00400 PF05239 PRC-barrel domain HKJ33_00405 PF01746 tRNA (Guanine-1)-methyltransferase HKJ33_00410 PF01245 Ribosomal protein L19 HKJ33_00415 PF00557 Metallopeptidase family M24 HKJ33_00420 PF00132 Bacterial transferase hexapeptide (six repeats) HKJ33_00420 PF14602 Hexapeptide repeat of succinyl-transferase HKJ33_00420 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HKJ33_00425 PF03960 ArsC family HKJ33_00430 PF01546 Peptidase family M20/M25/M40 HKJ33_00430 PF07687 Peptidase dimerisation domain HKJ33_00435 PF00733 Asparagine synthase HKJ33_00435 PF13537 Glutamine amidotransferase domain HKJ33_00445 PF03060 Nitronate monooxygenase HKJ33_00450 PF01726 LexA DNA binding domain HKJ33_00450 PF00717 Peptidase S24-like HKJ33_00455 PF00154 recA bacterial DNA recombination protein HKJ33_00460 PF01411 tRNA synthetases class II (A) HKJ33_00460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HKJ33_00460 PF02272 DHHA1 domain HKJ33_00465 PF02599 Global regulator protein family HKJ33_00475 PF01432 Peptidase family M3 HKJ33_00495 PF07731 Multicopper oxidase HKJ33_00495 PF07732 Multicopper oxidase HKJ33_00495 PF00394 Multicopper oxidase HKJ33_00500 PF05275 Copper resistance protein B precursor (CopB) HKJ33_00505 PF00133 tRNA synthetases class I (I, L, M and V) HKJ33_00505 PF08264 Anticodon-binding domain of tRNA HKJ33_00505 PF10458 Valyl tRNA synthetase tRNA binding arm HKJ33_00525 PF00883 Cytosol aminopeptidase family, catalytic domain HKJ33_00525 PF02789 Cytosol aminopeptidase family, N-terminal domain HKJ33_00545 PF01380 SIS domain HKJ33_00555 PF17284 Spermidine synthase tetramerisation domain HKJ33_00560 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HKJ33_00560 PF17944 Arginine decarboxylase C-terminal helical extension HKJ33_00560 PF17810 Arginine decarboxylase helical bundle domain HKJ33_00565 PF00106 short chain dehydrogenase HKJ33_00575 PF00750 tRNA synthetases class I (R) HKJ33_00575 PF05746 DALR anticodon binding domain HKJ33_00575 PF03485 Arginyl tRNA synthetase N terminal domain HKJ33_00580 PF04002 RadC-like JAB domain HKJ33_00585 PF02441 Flavoprotein HKJ33_00585 PF04127 DNA / pantothenate metabolism flavoprotein HKJ33_00590 PF00692 dUTPase HKJ33_00595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKJ33_00595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKJ33_00595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKJ33_00595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKJ33_00605 PF00156 Phosphoribosyl transferase domain HKJ33_00640 PF07690 Major Facilitator Superfamily HKJ33_00645 PF03702 Anhydro-N-acetylmuramic acid kinase HKJ33_00650 PF04225 Opacity-associated protein A LysM-like domain HKJ33_00650 PF01551 Peptidase family M23 HKJ33_00655 PF00579 tRNA synthetases class I (W and Y) HKJ33_00690 PF01578 Cytochrome C assembly protein HKJ33_00705 PF00009 Elongation factor Tu GTP binding domain HKJ33_00705 PF16658 Class II release factor RF3, C-terminal domain HKJ33_00710 PF03006 Haemolysin-III related HKJ33_00715 PF00535 Glycosyl transferase family 2 HKJ33_00720 PF01026 TatD related DNase HKJ33_00735 PF01597 Glycine cleavage H-protein HKJ33_00740 PF01571 Aminomethyltransferase folate-binding domain HKJ33_00740 PF08669 Glycine cleavage T-protein C-terminal barrel domain HKJ33_00750 PF01145 SPFH domain / Band 7 family HKJ33_00750 PF16200 C-terminal region of band_7 HKJ33_00755 PF03819 MazG nucleotide pyrophosphohydrolase domain HKJ33_00760 PF00459 Inositol monophosphatase family HKJ33_00765 PF00293 NUDIX domain HKJ33_00770 PF00202 Aminotransferase class-III HKJ33_00775 PF04452 RNA methyltransferase HKJ33_00780 PF00270 DEAD/DEAH box helicase HKJ33_00780 PF00271 Helicase conserved C-terminal domain HKJ33_00785 PF01242 6-pyruvoyl tetrahydropterin synthase HKJ33_00805 PF00589 Phage integrase family HKJ33_00805 PF02899 Phage integrase, N-terminal SAM-like domain HKJ33_00840 PF02498 BRO family, N-terminal domain HKJ33_00840 PF10548 P22AR C-terminal domain HKJ33_00935 PF00959 Phage lysozyme HKJ33_01005 PF01381 Helix-turn-helix HKJ33_01035 PF17482 Phage tail sheath C-terminal domain HKJ33_01035 PF04984 Phage tail sheath protein subtilisin-like domain HKJ33_01090 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HKJ33_01095 PF01336 OB-fold nucleic acid binding domain HKJ33_01095 PF07733 Bacterial DNA polymerase III alpha NTPase domain HKJ33_01095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HKJ33_01095 PF14579 Helix-hairpin-helix motif HKJ33_01095 PF02811 PHP domain HKJ33_01100 PF01259 SAICAR synthetase HKJ33_01105 PF01556 DnaJ C terminal domain HKJ33_01105 PF00226 DnaJ domain HKJ33_01105 PF00684 DnaJ central domain HKJ33_01110 PF00834 Ribulose-phosphate 3 epimerase family HKJ33_01120 PF04715 Anthranilate synthase component I, N terminal region HKJ33_01120 PF00425 chorismate binding enzyme HKJ33_01125 PF00117 Glutamine amidotransferase class-I HKJ33_01130 PF02885 Glycosyl transferase family, helical bundle domain HKJ33_01130 PF00591 Glycosyl transferase family, a/b domain HKJ33_01135 PF00218 Indole-3-glycerol phosphate synthase HKJ33_01155 PF00557 Metallopeptidase family M24 HKJ33_01155 PF01321 Creatinase/Prolidase N-terminal domain HKJ33_01170 PF01702 Queuine tRNA-ribosyltransferase HKJ33_01175 PF02699 Preprotein translocase subunit HKJ33_01180 PF02355 Protein export membrane protein HKJ33_01180 PF07549 SecD/SecF GG Motif HKJ33_01180 PF13721 SecD export protein N-terminal TM region HKJ33_01185 PF02355 Protein export membrane protein HKJ33_01185 PF07549 SecD/SecF GG Motif HKJ33_01195 PF12626 Polymerase A arginine-rich C-terminus HKJ33_01195 PF12627 Probable RNA and SrmB- binding site of polymerase A HKJ33_01195 PF01743 Poly A polymerase head domain HKJ33_01200 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HKJ33_01205 PF02548 Ketopantoate hydroxymethyltransferase HKJ33_01210 PF02569 Pantoate-beta-alanine ligase HKJ33_01215 PF02261 Aspartate decarboxylase HKJ33_01220 PF00342 Phosphoglucose isomerase HKJ33_01230 PF17384 RimP C-terminal SH3 domain HKJ33_01230 PF02576 RimP N-terminal domain HKJ33_01235 PF13184 NusA-like KH domain HKJ33_01235 PF08529 NusA N-terminal domain HKJ33_01235 PF00575 S1 RNA binding domain HKJ33_01240 PF08364 Bacterial translation initiation factor IF-2 associated region HKJ33_01240 PF00009 Elongation factor Tu GTP binding domain HKJ33_01240 PF11987 Translation-initiation factor 2 HKJ33_01240 PF04760 Translation initiation factor IF-2, N-terminal region HKJ33_01245 PF02033 Ribosome-binding factor A HKJ33_01250 PF09157 Pseudouridine synthase II TruB, C-terminal HKJ33_01250 PF16198 tRNA pseudouridylate synthase B C-terminal domain HKJ33_01250 PF01509 TruB family pseudouridylate synthase (N terminal domain) HKJ33_01255 PF00312 Ribosomal protein S15 HKJ33_01260 PF00575 S1 RNA binding domain HKJ33_01260 PF01138 3' exoribonuclease family, domain 1 HKJ33_01260 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HKJ33_01260 PF00013 KH domain HKJ33_01260 PF03725 3' exoribonuclease family, domain 2 HKJ33_01265 PF01638 HxlR-like helix-turn-helix HKJ33_01270 PF05368 NmrA-like family HKJ33_01300 PF00271 Helicase conserved C-terminal domain HKJ33_01300 PF00270 DEAD/DEAH box helicase HKJ33_01300 PF03880 DbpA RNA binding domain HKJ33_01310 PF00766 Electron transfer flavoprotein FAD-binding domain HKJ33_01310 PF01012 Electron transfer flavoprotein domain HKJ33_01315 PF01012 Electron transfer flavoprotein domain HKJ33_01320 PF16363 GDP-mannose 4,6 dehydratase HKJ33_01325 PF00483 Nucleotidyl transferase HKJ33_01330 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HKJ33_01335 PF04321 RmlD substrate binding domain HKJ33_01340 PF00483 Nucleotidyl transferase HKJ33_01340 PF01050 Mannose-6-phosphate isomerase HKJ33_01345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKJ33_01345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKJ33_01345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKJ33_01345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKJ33_01370 PF12951 Passenger-associated-transport-repeat HKJ33_01370 PF03797 Autotransporter beta-domain HKJ33_01370 PF00082 Subtilase family HKJ33_01375 PF06779 Uncharacterised MFS-type transporter YbfB HKJ33_01385 PF00365 Phosphofructokinase HKJ33_01395 PF01225 Mur ligase family, catalytic domain HKJ33_01395 PF02875 Mur ligase family, glutamate ligase domain HKJ33_01395 PF08245 Mur ligase middle domain HKJ33_01400 PF01569 PAP2 superfamily HKJ33_01415 PF02789 Cytosol aminopeptidase family, N-terminal domain HKJ33_01415 PF00883 Cytosol aminopeptidase family, catalytic domain HKJ33_01420 PF01594 AI-2E family transporter HKJ33_01440 PF00595 PDZ domain HKJ33_01445 PF01370 NAD dependent epimerase/dehydratase family HKJ33_01445 PF08338 Domain of unknown function (DUF1731) HKJ33_01450 PF13193 AMP-binding enzyme C-terminal domain HKJ33_01450 PF00501 AMP-binding enzyme HKJ33_01455 PF00694 Aconitase C-terminal domain HKJ33_01455 PF00330 Aconitase family (aconitate hydratase) HKJ33_01470 PF06434 Aconitate hydratase 2 N-terminus HKJ33_01470 PF11791 Aconitate B N-terminal domain HKJ33_01470 PF00330 Aconitase family (aconitate hydratase) HKJ33_01520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKJ33_01530 PF00121 Triosephosphate isomerase HKJ33_01545 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HKJ33_01550 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HKJ33_01555 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HKJ33_01560 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HKJ33_01570 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HKJ33_01570 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HKJ33_01570 PF10531 SLBB domain HKJ33_01575 PF00384 Molybdopterin oxidoreductase HKJ33_01575 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HKJ33_01575 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal HKJ33_01580 PF00146 NADH dehydrogenase HKJ33_01585 PF12838 4Fe-4S dicluster domain HKJ33_01590 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HKJ33_01595 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HKJ33_01600 PF00361 Proton-conducting membrane transporter HKJ33_01600 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HKJ33_01605 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HKJ33_01605 PF00361 Proton-conducting membrane transporter HKJ33_01610 PF00361 Proton-conducting membrane transporter HKJ33_01615 PF00106 short chain dehydrogenase HKJ33_01620 PF03600 Citrate transporter HKJ33_01630 PF00486 Transcriptional regulatory protein, C terminal HKJ33_01630 PF00072 Response regulator receiver domain HKJ33_01635 PF08521 Two-component sensor kinase N-terminal HKJ33_01635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_01635 PF00512 His Kinase A (phospho-acceptor) domain HKJ33_01650 PF00196 Bacterial regulatory proteins, luxR family HKJ33_01650 PF00072 Response regulator receiver domain HKJ33_01655 PF00512 His Kinase A (phospho-acceptor) domain HKJ33_01655 PF09456 RcsC Alpha-Beta-Loop (ABL) HKJ33_01655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_01655 PF00072 Response regulator receiver domain HKJ33_01670 PF00375 Sodium:dicarboxylate symporter family HKJ33_01675 PF00390 Malic enzyme, N-terminal domain HKJ33_01675 PF03949 Malic enzyme, NAD binding domain HKJ33_01675 PF01515 Phosphate acetyl/butaryl transferase HKJ33_01680 PF00183 Hsp90 protein HKJ33_01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_01690 PF01467 Cytidylyltransferase-like HKJ33_01700 PF00037 4Fe-4S binding domain HKJ33_01710 PF05230 MASE2 domain HKJ33_01710 PF00990 Diguanylate cyclase, GGDEF domain HKJ33_01715 PF08460 Bacterial SH3 domain HKJ33_01715 PF01551 Peptidase family M23 HKJ33_01720 PF01979 Amidohydrolase family HKJ33_01725 PF01809 Putative membrane protein insertion efficiency factor HKJ33_01730 PF01258 Prokaryotic dksA/traR C4-type zinc finger HKJ33_01740 PF05977 Transmembrane secretion effector HKJ33_01745 PF02657 Fe-S metabolism associated domain HKJ33_01750 PF01406 tRNA synthetases class I (C) catalytic domain HKJ33_01750 PF09190 DALR domain HKJ33_01765 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HKJ33_01765 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HKJ33_01770 PF00764 Arginosuccinate synthase HKJ33_01775 PF07687 Peptidase dimerisation domain HKJ33_01775 PF01546 Peptidase family M20/M25/M40 HKJ33_01780 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase HKJ33_01780 PF00696 Amino acid kinase family HKJ33_01785 PF01118 Semialdehyde dehydrogenase, NAD binding domain HKJ33_01790 PF00206 Lyase HKJ33_01795 PF01472 PUA domain HKJ33_01795 PF00696 Amino acid kinase family HKJ33_01800 PF00171 Aldehyde dehydrogenase family HKJ33_01830 PF06594 Haemolysin-type calcium binding protein related domain HKJ33_01830 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKJ33_01835 PF14437 MafB19-like deaminase HKJ33_01840 PF01325 Iron dependent repressor, N-terminal DNA binding domain HKJ33_01840 PF02742 Iron dependent repressor, metal binding and dimerisation domain HKJ33_01845 PF01566 Natural resistance-associated macrophage protein HKJ33_01850 PF04376 Arginine-tRNA-protein transferase, N terminus HKJ33_01850 PF04377 Arginine-tRNA-protein transferase, C terminus HKJ33_01870 PF03797 Autotransporter beta-domain HKJ33_01870 PF12951 Passenger-associated-transport-repeat HKJ33_01870 PF00082 Subtilase family HKJ33_01885 PF01553 Acyltransferase HKJ33_01905 PF05221 S-adenosyl-L-homocysteine hydrolase HKJ33_01905 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HKJ33_01915 PF01351 Ribonuclease HII HKJ33_01920 PF02684 Lipid-A-disaccharide synthetase HKJ33_01925 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HKJ33_01925 PF00132 Bacterial transferase hexapeptide (six repeats) HKJ33_01930 PF07977 FabA-like domain HKJ33_01935 PF00132 Bacterial transferase hexapeptide (six repeats) HKJ33_01935 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HKJ33_01940 PF07244 Surface antigen variable number repeat HKJ33_01940 PF01103 Surface antigen HKJ33_01945 PF17820 PDZ domain HKJ33_01945 PF02163 Peptidase family M50 HKJ33_01950 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HKJ33_01950 PF13288 DXP reductoisomerase C-terminal domain HKJ33_01950 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HKJ33_01960 PF01255 Putative undecaprenyl diphosphate synthase HKJ33_01965 PF01765 Ribosome recycling factor HKJ33_01995 PF00696 Amino acid kinase family HKJ33_02020 PF01081 KDPG and KHG aldolase HKJ33_02025 PF00920 Dehydratase family HKJ33_02030 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HKJ33_02035 PF02685 Glucokinase HKJ33_02040 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HKJ33_02040 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HKJ33_02045 PF00005 ABC transporter HKJ33_02045 PF17912 MalK OB fold domain HKJ33_02050 PF01571 Aminomethyltransferase folate-binding domain HKJ33_02060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HKJ33_02065 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HKJ33_02070 PF02910 Fumarate reductase flavoprotein C-term HKJ33_02070 PF00890 FAD binding domain HKJ33_02075 PF13085 2Fe-2S iron-sulfur cluster binding domain HKJ33_02080 PF03937 Flavinator of succinate dehydrogenase HKJ33_02090 PF12704 MacB-like periplasmic core domain HKJ33_02090 PF02687 FtsX-like permease family HKJ33_02095 PF00005 ABC transporter HKJ33_02100 PF03772 Competence protein HKJ33_02100 PF00753 Metallo-beta-lactamase superfamily HKJ33_02105 PF01618 MotA/TolQ/ExbB proton channel family HKJ33_02115 PF00005 ABC transporter HKJ33_02115 PF00664 ABC transporter transmembrane region HKJ33_02120 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HKJ33_02155 PF04984 Phage tail sheath protein subtilisin-like domain HKJ33_02155 PF17482 Phage tail sheath C-terminal domain HKJ33_02180 PF04221 RelB antitoxin HKJ33_02255 PF00959 Phage lysozyme HKJ33_02260 PF01555 DNA methylase HKJ33_02325 PF04264 YceI-like domain HKJ33_02330 PF13091 PLD-like domain HKJ33_02350 PF03358 NADPH-dependent FMN reductase HKJ33_02360 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HKJ33_02360 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HKJ33_02380 PF01367 5'-3' exonuclease, C-terminal SAM fold HKJ33_02380 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HKJ33_02380 PF01612 3'-5' exonuclease HKJ33_02380 PF00476 DNA polymerase family A HKJ33_02385 PF01113 Dihydrodipicolinate reductase, N-terminus HKJ33_02385 PF05173 Dihydrodipicolinate reductase, C-terminus HKJ33_02390 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HKJ33_02390 PF00117 Glutamine amidotransferase class-I HKJ33_02395 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HKJ33_02395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HKJ33_02395 PF02142 MGS-like domain HKJ33_02400 PF01272 Transcription elongation factor, GreA/GreB, C-term HKJ33_02400 PF03449 Transcription elongation factor, N-terminal HKJ33_02410 PF01368 DHH family HKJ33_02410 PF17768 RecJ OB domain HKJ33_02410 PF02272 DHHA1 domain HKJ33_02420 PF01336 OB-fold nucleic acid binding domain HKJ33_02420 PF00152 tRNA synthetases class II (D, K and N) HKJ33_02425 PF00072 Response regulator receiver domain HKJ33_02430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_02430 PF00512 His Kinase A (phospho-acceptor) domain HKJ33_02430 PF01627 Hpt domain HKJ33_02430 PF00072 Response regulator receiver domain HKJ33_02435 PF00378 Enoyl-CoA hydratase/isomerase HKJ33_02440 PF01842 ACT domain HKJ33_02440 PF00696 Amino acid kinase family HKJ33_02450 PF08245 Mur ligase middle domain HKJ33_02460 PF00293 NUDIX domain HKJ33_02465 PF02219 Methylenetetrahydrofolate reductase HKJ33_02475 PF02545 Maf-like protein HKJ33_02480 PF00575 S1 RNA binding domain HKJ33_02480 PF10150 Ribonuclease E/G family HKJ33_02490 PF01523 Putative modulator of DNA gyrase HKJ33_02495 PF04751 Protein of unknown function (DUF615) HKJ33_02500 PF01523 Putative modulator of DNA gyrase HKJ33_02505 PF03466 LysR substrate binding domain HKJ33_02505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKJ33_02520 PF00107 Zinc-binding dehydrogenase HKJ33_02520 PF08240 Alcohol dehydrogenase GroES-like domain HKJ33_02530 PF00132 Bacterial transferase hexapeptide (six repeats) HKJ33_02530 PF12804 MobA-like NTP transferase domain HKJ33_02530 PF14602 Hexapeptide repeat of succinyl-transferase HKJ33_02540 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HKJ33_02540 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HKJ33_02545 PF02874 ATP synthase alpha/beta family, beta-barrel domain HKJ33_02545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKJ33_02550 PF00231 ATP synthase HKJ33_02555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKJ33_02555 PF00306 ATP synthase alpha/beta chain, C terminal domain HKJ33_02555 PF02874 ATP synthase alpha/beta family, beta-barrel domain HKJ33_02560 PF00213 ATP synthase delta (OSCP) subunit HKJ33_02565 PF00430 ATP synthase B/B' CF(0) HKJ33_02570 PF00137 ATP synthase subunit C HKJ33_02575 PF00119 ATP synthase A chain HKJ33_02585 PF00338 Ribosomal protein S10p/S20e HKJ33_02590 PF00297 Ribosomal protein L3 HKJ33_02595 PF00573 Ribosomal protein L4/L1 family HKJ33_02600 PF00276 Ribosomal protein L23 HKJ33_02605 PF00181 Ribosomal Proteins L2, RNA binding domain HKJ33_02605 PF03947 Ribosomal Proteins L2, C-terminal domain HKJ33_02610 PF00203 Ribosomal protein S19 HKJ33_02615 PF00237 Ribosomal protein L22p/L17e HKJ33_02620 PF07650 KH domain HKJ33_02620 PF00189 Ribosomal protein S3, C-terminal domain HKJ33_02625 PF00252 Ribosomal protein L16p/L10e HKJ33_02630 PF00831 Ribosomal L29 protein HKJ33_02635 PF00366 Ribosomal protein S17 HKJ33_02640 PF00238 Ribosomal protein L14p/L23e HKJ33_02645 PF00467 KOW motif HKJ33_02645 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HKJ33_02650 PF00281 Ribosomal protein L5 HKJ33_02650 PF00673 ribosomal L5P family C-terminus HKJ33_02655 PF00253 Ribosomal protein S14p/S29e HKJ33_02660 PF00410 Ribosomal protein S8 HKJ33_02665 PF00347 Ribosomal protein L6 HKJ33_02670 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HKJ33_02675 PF00333 Ribosomal protein S5, N-terminal domain HKJ33_02675 PF03719 Ribosomal protein S5, C-terminal domain HKJ33_02680 PF00327 Ribosomal protein L30p/L7e HKJ33_02685 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HKJ33_02690 PF00344 SecY translocase HKJ33_02695 PF00416 Ribosomal protein S13/S18 HKJ33_02700 PF00411 Ribosomal protein S11 HKJ33_02705 PF01479 S4 domain HKJ33_02705 PF00163 Ribosomal protein S4/S9 N-terminal domain HKJ33_02710 PF01000 RNA polymerase Rpb3/RpoA insert domain HKJ33_02710 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HKJ33_02710 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HKJ33_02715 PF01196 Ribosomal protein L17 HKJ33_02720 PF04380 Membrane fusogenic activity HKJ33_02725 PF13335 Magnesium chelatase, subunit ChlI C-terminal HKJ33_02725 PF01078 Magnesium chelatase, subunit ChlI HKJ33_02745 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HKJ33_02745 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HKJ33_02745 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HKJ33_02760 PF05697 Bacterial trigger factor protein (TF) HKJ33_02760 PF05698 Bacterial trigger factor protein (TF) C-terminus HKJ33_02765 PF00574 Clp protease HKJ33_02770 PF06689 ClpX C4-type zinc finger HKJ33_02770 PF07724 AAA domain (Cdc48 subfamily) HKJ33_02770 PF10431 C-terminal, D2-small domain, of ClpB protein HKJ33_02775 PF05362 Lon protease (S16) C-terminal proteolytic domain HKJ33_02775 PF00004 ATPase family associated with various cellular activities (AAA) HKJ33_02775 PF02190 ATP-dependent protease La (LON) substrate-binding domain HKJ33_02780 PF00216 Bacterial DNA-binding protein HKJ33_02805 PF03477 ATP cone domain HKJ33_02805 PF02867 Ribonucleotide reductase, barrel domain HKJ33_02805 PF00317 Ribonucleotide reductase, all-alpha domain HKJ33_02810 PF00268 Ribonucleotide reductase, small chain HKJ33_02825 PF01479 S4 domain HKJ33_02825 PF00849 RNA pseudouridylate synthase HKJ33_02830 PF13419 Haloacid dehalogenase-like hydrolase HKJ33_02840 PF00830 Ribosomal L28 family HKJ33_02845 PF00471 Ribosomal protein L33 HKJ33_02850 PF13091 PLD-like domain HKJ33_02850 PF13396 Phospholipase_D-nuclease N-terminal HKJ33_02855 PF02798 Glutathione S-transferase, N-terminal domain HKJ33_02855 PF00043 Glutathione S-transferase, C-terminal domain HKJ33_02860 PF00056 lactate/malate dehydrogenase, NAD binding domain HKJ33_02860 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HKJ33_02865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HKJ33_02880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKJ33_02880 PF00529 HlyD membrane-fusion protein of T1SS HKJ33_02905 PF00664 ABC transporter transmembrane region HKJ33_02905 PF00005 ABC transporter HKJ33_02905 PF03412 Peptidase C39 family HKJ33_02910 PF01061 ABC-2 type transporter HKJ33_02915 PF00005 ABC transporter HKJ33_02920 PF05567 Neisseria PilC beta-propeller domain HKJ33_02940 PF00270 DEAD/DEAH box helicase HKJ33_02940 PF00271 Helicase conserved C-terminal domain HKJ33_02940 PF08482 ATP-dependent helicase C-terminal HKJ33_02940 PF04408 Helicase associated domain (HA2) HKJ33_02955 PF13185 GAF domain HKJ33_02965 PF17243 POTRA domain TamA domain 1 HKJ33_02965 PF01103 Surface antigen HKJ33_02970 PF04357 TamB, inner membrane protein subunit of TAM complex HKJ33_03025 PF05973 Phage derived protein Gp49-like (DUF891) HKJ33_03030 PF01381 Helix-turn-helix HKJ33_03060 PF05973 Phage derived protein Gp49-like (DUF891) HKJ33_03065 PF01381 Helix-turn-helix HKJ33_03130 PF04233 Phage Mu protein F like protein HKJ33_03175 PF00959 Phage lysozyme HKJ33_03190 PF03796 DnaB-like helicase C terminal domain HKJ33_03190 PF00772 DnaB-like helicase N terminal domain HKJ33_03205 PF02498 BRO family, N-terminal domain HKJ33_03205 PF10548 P22AR C-terminal domain HKJ33_03230 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HKJ33_03300 PF10065 Uncharacterized conserved protein (DUF2303) HKJ33_03320 PF00436 Single-strand binding protein family HKJ33_03385 PF00694 Aconitase C-terminal domain HKJ33_03385 PF00330 Aconitase family (aconitate hydratase) HKJ33_03390 PF04303 PrpF protein HKJ33_03420 PF07703 Alpha-2-macroglobulin bait region domain HKJ33_03420 PF01835 MG2 domain HKJ33_03420 PF17962 Bacterial macroglobulin domain 6 HKJ33_03420 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HKJ33_03420 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HKJ33_03420 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HKJ33_03420 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain HKJ33_03420 PF00207 Alpha-2-macroglobulin family HKJ33_03425 PF07859 alpha/beta hydrolase fold HKJ33_03430 PF12833 Helix-turn-helix domain HKJ33_03430 PF12852 Cupin HKJ33_03440 PF00929 Exonuclease HKJ33_03445 PF00924 Mechanosensitive ion channel HKJ33_03445 PF05552 Conserved TM helix HKJ33_03450 PF00391 PEP-utilising enzyme, mobile domain HKJ33_03450 PF02896 PEP-utilising enzyme, TIM barrel domain HKJ33_03450 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HKJ33_03455 PF03618 Kinase/pyrophosphorylase HKJ33_03475 PF00553 Cellulose binding domain HKJ33_03475 PF01341 Glycosyl hydrolases family 6 HKJ33_03475 PF00041 Fibronectin type III domain HKJ33_03480 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HKJ33_03480 PF04055 Radical SAM superfamily HKJ33_03485 PF03099 Biotin/lipoate A/B protein ligase family HKJ33_03490 PF04359 Protein of unknown function (DUF493) HKJ33_03510 PF04286 Protein of unknown function (DUF445) HKJ33_03515 PF00571 CBS domain HKJ33_03515 PF03471 Transporter associated domain HKJ33_03515 PF01595 Cyclin M transmembrane N-terminal domain HKJ33_03530 PF00204 DNA gyrase B HKJ33_03530 PF00986 DNA gyrase B subunit, carboxyl terminus HKJ33_03530 PF01751 Toprim domain HKJ33_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_03540 PF06418 CTP synthase N-terminus HKJ33_03540 PF00117 Glutamine amidotransferase class-I HKJ33_03545 PF00793 DAHP synthetase I family HKJ33_03550 PF00113 Enolase, C-terminal TIM barrel domain HKJ33_03550 PF03952 Enolase, N-terminal domain HKJ33_03555 PF04977 Septum formation initiator HKJ33_03560 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HKJ33_03565 PF02542 YgbB family HKJ33_03570 PF01713 Smr domain HKJ33_03595 PF02470 MlaD protein HKJ33_03595 PF03886 ABC-type transport auxiliary lipoprotein component HKJ33_03600 PF00005 ABC transporter HKJ33_03605 PF02405 Permease MlaE HKJ33_03645 PF00436 Single-strand binding protein family HKJ33_03670 PF07963 Prokaryotic N-terminal methylation motif HKJ33_03780 PF00239 Resolvase, N terminal domain HKJ33_03785 PF12323 Helix-turn-helix domain HKJ33_03785 PF07282 Putative transposase DNA-binding domain HKJ33_03785 PF01385 Probable transposase HKJ33_03825 PF04085 rod shape-determining protein MreC HKJ33_03830 PF04093 rod shape-determining protein MreD HKJ33_03835 PF00905 Penicillin binding protein transpeptidase domain HKJ33_03835 PF03717 Penicillin-binding Protein dimerisation domain HKJ33_03840 PF01098 Cell cycle protein HKJ33_03845 PF02547 Queuosine biosynthesis protein HKJ33_03850 PF04607 Region found in RelA / SpoT proteins HKJ33_03850 PF02824 TGS domain HKJ33_03850 PF13291 ACT domain HKJ33_03865 PF03776 Septum formation topological specificity factor MinE HKJ33_03870 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HKJ33_03875 PF03775 Septum formation inhibitor MinC, C-terminal domain HKJ33_03875 PF05209 Septum formation inhibitor MinC, N-terminal domain HKJ33_03890 PF00730 HhH-GPD superfamily base excision DNA repair protein HKJ33_03905 PF04264 YceI-like domain HKJ33_03910 PF17149 Periplasmic sensor domain found in signal transduction proteins HKJ33_03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_03910 PF00512 His Kinase A (phospho-acceptor) domain HKJ33_03910 PF01627 Hpt domain HKJ33_03910 PF00072 Response regulator receiver domain HKJ33_03910 PF00672 HAMP domain HKJ33_03915 PF01208 Uroporphyrinogen decarboxylase (URO-D) HKJ33_03920 PF01761 3-dehydroquinate synthase HKJ33_03925 PF01202 Shikimate kinase HKJ33_03930 PF01243 Pyridoxamine 5'-phosphate oxidase HKJ33_03930 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HKJ33_03935 PF00749 tRNA synthetases class I (E and Q), catalytic domain HKJ33_03935 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HKJ33_03945 PF03932 CutC family HKJ33_03960 PF00528 Binding-protein-dependent transport system inner membrane component HKJ33_03965 PF00528 Binding-protein-dependent transport system inner membrane component HKJ33_03970 PF12857 TOBE-like domain HKJ33_03970 PF00005 ABC transporter HKJ33_03980 PF04542 Sigma-70 region 2 HKJ33_03980 PF00140 Sigma-70 factor, region 1.2 HKJ33_03980 PF03979 Sigma-70 factor, region 1.1 HKJ33_03980 PF04546 Sigma-70, non-essential region HKJ33_03980 PF04539 Sigma-70 region 3 HKJ33_03980 PF04545 Sigma-70, region 4 HKJ33_03985 PF03989 DNA gyrase C-terminal domain, beta-propeller HKJ33_03985 PF00521 DNA gyrase/topoisomerase IV, subunit A HKJ33_03990 PF01047 MarR family HKJ33_04000 PF12697 Alpha/beta hydrolase family HKJ33_04005 PF00155 Aminotransferase class I and II HKJ33_04015 PF01040 UbiA prenyltransferase family HKJ33_04020 PF00753 Metallo-beta-lactamase superfamily HKJ33_04025 PF01966 HD domain HKJ33_04025 PF01743 Poly A polymerase head domain HKJ33_04025 PF12627 Probable RNA and SrmB- binding site of polymerase A HKJ33_04030 PF01464 Transglycosylase SLT domain HKJ33_04030 PF14718 Soluble lytic murein transglycosylase L domain HKJ33_04035 PF02666 Phosphatidylserine decarboxylase HKJ33_04040 PF02630 SCO1/SenC HKJ33_04045 PF05175 Methyltransferase small domain HKJ33_04050 PF01264 Chorismate synthase HKJ33_04060 PF02774 Semialdehyde dehydrogenase, dimerisation domain HKJ33_04060 PF01118 Semialdehyde dehydrogenase, NAD binding domain HKJ33_04070 PF01416 tRNA pseudouridine synthase HKJ33_04075 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HKJ33_04080 PF00291 Pyridoxal-phosphate dependent enzyme HKJ33_04085 PF00290 Tryptophan synthase alpha chain HKJ33_04090 PF18073 Rubredoxin metal binding domain HKJ33_04095 PF00296 Luciferase-like monooxygenase HKJ33_04105 PF00570 HRDC domain HKJ33_04105 PF16124 RecQ zinc-binding HKJ33_04105 PF09382 RQC domain HKJ33_04105 PF00271 Helicase conserved C-terminal domain HKJ33_04105 PF00270 DEAD/DEAH box helicase HKJ33_04110 PF00210 Ferritin-like domain HKJ33_04115 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HKJ33_04115 PF00270 DEAD/DEAH box helicase HKJ33_04115 PF11898 Domain of unknown function (DUF3418) HKJ33_04115 PF04408 Helicase associated domain (HA2) HKJ33_04115 PF00271 Helicase conserved C-terminal domain HKJ33_04120 PF02347 Glycine cleavage system P-protein HKJ33_04125 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HKJ33_04130 PF00510 Cytochrome c oxidase subunit III HKJ33_04135 PF00115 Cytochrome C and Quinol oxidase polypeptide I HKJ33_04140 PF06481 COX Aromatic Rich Motif HKJ33_04140 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HKJ33_04145 PF00348 Polyprenyl synthetase HKJ33_04150 PF00436 Single-strand binding protein family HKJ33_04165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKJ33_04190 PF05524 PEP-utilising enzyme, N-terminal HKJ33_04190 PF00391 PEP-utilising enzyme, mobile domain HKJ33_04190 PF02896 PEP-utilising enzyme, TIM barrel domain HKJ33_04195 PF00381 PTS HPr component phosphorylation site HKJ33_04205 PF03668 P-loop ATPase protein family HKJ33_04210 PF02603 HPr Serine kinase N terminus HKJ33_04210 PF07475 HPr Serine kinase C-terminal domain HKJ33_04215 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HKJ33_04220 PF04552 Sigma-54, DNA binding domain HKJ33_04220 PF04963 Sigma-54 factor, core binding domain HKJ33_04220 PF00309 Sigma-54 factor, Activator interacting domain (AID) HKJ33_04225 PF00005 ABC transporter HKJ33_04225 PF12399 Branched-chain amino acid ATP-binding cassette transporter HKJ33_04245 PF01380 SIS domain HKJ33_04245 PF00571 CBS domain HKJ33_04250 PF01722 BolA-like protein HKJ33_04255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HKJ33_04285 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HKJ33_04285 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HKJ33_04285 PF02769 AIR synthase related protein, C-terminal domain HKJ33_04290 PF13098 Thioredoxin-like domain HKJ33_04290 PF10411 Disulfide bond isomerase protein N-terminus HKJ33_04295 PF00589 Phage integrase family HKJ33_04295 PF02899 Phage integrase, N-terminal SAM-like domain HKJ33_04300 PF00520 Ion transport protein HKJ33_04300 PF00027 Cyclic nucleotide-binding domain HKJ33_04305 PF00202 Aminotransferase class-III HKJ33_04310 PF04107 Glutamate-cysteine ligase family 2(GCS2) HKJ33_04315 PF01926 50S ribosome-binding GTPase HKJ33_04330 PF01323 DSBA-like thioredoxin domain HKJ33_04335 PF01323 DSBA-like thioredoxin domain HKJ33_04345 PF04356 Protein of unknown function (DUF489) HKJ33_04355 PF00293 NUDIX domain HKJ33_04360 PF02617 ATP-dependent Clp protease adaptor protein ClpS HKJ33_04365 PF10431 C-terminal, D2-small domain, of ClpB protein HKJ33_04365 PF17871 AAA lid domain HKJ33_04365 PF07724 AAA domain (Cdc48 subfamily) HKJ33_04365 PF00004 ATPase family associated with various cellular activities (AAA) HKJ33_04365 PF02861 Clp amino terminal domain, pathogenicity island component HKJ33_04370 PF01176 Translation initiation factor 1A / IF-1 HKJ33_04375 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HKJ33_04385 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKJ33_04390 PF01580 FtsK/SpoIIIE family HKJ33_04390 PF09397 Ftsk gamma domain HKJ33_04390 PF17854 FtsK alpha domain HKJ33_04390 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HKJ33_04400 PF03548 Outer membrane lipoprotein carrier protein LolA HKJ33_04405 PF12002 MgsA AAA+ ATPase C terminal HKJ33_04405 PF00004 ATPase family associated with various cellular activities (AAA) HKJ33_04405 PF16193 AAA C-terminal domain HKJ33_04410 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HKJ33_04415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_04415 PF00512 His Kinase A (phospho-acceptor) domain HKJ33_04420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HKJ33_04440 PF02685 Glucokinase HKJ33_04450 PF07690 Major Facilitator Superfamily HKJ33_04455 PF00356 Bacterial regulatory proteins, lacI family HKJ33_04460 PF01380 SIS domain HKJ33_04465 PF01979 Amidohydrolase family HKJ33_04470 PF17848 Acetyl-coA carboxylase zinc finger domain HKJ33_04470 PF01039 Carboxyl transferase domain HKJ33_04475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HKJ33_04475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HKJ33_04475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HKJ33_04475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HKJ33_04480 PF01522 Polysaccharide deacetylase HKJ33_04485 PF13439 Glycosyltransferase Family 4 HKJ33_04485 PF00534 Glycosyl transferases group 1 HKJ33_04490 PF00355 Rieske [2Fe-2S] domain HKJ33_04495 PF00266 Aminotransferase class-V HKJ33_04500 PF01458 Uncharacterized protein family (UPF0051) HKJ33_04505 PF00005 ABC transporter HKJ33_04510 PF01458 Uncharacterized protein family (UPF0051) HKJ33_04515 PF02082 Transcriptional regulator HKJ33_04525 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HKJ33_04525 PF00326 Prolyl oligopeptidase family HKJ33_04535 PF01678 Diaminopimelate epimerase HKJ33_04545 PF00589 Phage integrase family HKJ33_04545 PF02899 Phage integrase, N-terminal SAM-like domain HKJ33_04550 PF00227 Proteasome subunit HKJ33_04555 PF10431 C-terminal, D2-small domain, of ClpB protein HKJ33_04555 PF00004 ATPase family associated with various cellular activities (AAA) HKJ33_04555 PF07724 AAA domain (Cdc48 subfamily) HKJ33_04635 PF01381 Helix-turn-helix HKJ33_04705 PF00959 Phage lysozyme HKJ33_04810 PF10548 P22AR C-terminal domain HKJ33_04810 PF02498 BRO family, N-terminal domain HKJ33_04845 PF01209 ubiE/COQ5 methyltransferase family HKJ33_04850 PF01433 Peptidase family M1 domain HKJ33_04850 PF11838 ERAP1-like C-terminal domain HKJ33_04870 PF13369 Transglutaminase-like superfamily HKJ33_04885 PF01507 Phosphoadenosine phosphosulfate reductase family HKJ33_04890 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HKJ33_04890 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HKJ33_04895 PF00175 Oxidoreductase NAD-binding domain HKJ33_04895 PF00258 Flavodoxin HKJ33_04895 PF00667 FAD binding domain HKJ33_04900 PF01507 Phosphoadenosine phosphosulfate reductase family HKJ33_04905 PF00009 Elongation factor Tu GTP binding domain HKJ33_04910 PF01192 RNA polymerase Rpb6 HKJ33_04915 PF00625 Guanylate kinase HKJ33_04920 PF03755 YicC-like family, N-terminal region HKJ33_04920 PF08340 Domain of unknown function (DUF1732) HKJ33_04925 PF01138 3' exoribonuclease family, domain 1 HKJ33_04925 PF03725 3' exoribonuclease family, domain 2 HKJ33_04930 PF01725 Ham1 family HKJ33_04935 PF04055 Radical SAM superfamily HKJ33_04935 PF06969 HemN C-terminal domain HKJ33_04950 PF00561 alpha/beta hydrolase fold HKJ33_04955 PF05175 Methyltransferase small domain HKJ33_04955 PF17827 PrmC N-terminal domain HKJ33_04970 PF03895 YadA-like membrane anchor domain HKJ33_04970 PF05658 Head domain of trimeric autotransporter adhesin HKJ33_04970 PF13018 Extended Signal Peptide of Type V secretion system HKJ33_04970 PF05662 Coiled stalk of trimeric autotransporter adhesin HKJ33_04975 PF00437 Type II/IV secretion system protein HKJ33_04975 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HKJ33_04980 PF00482 Type II secretion system (T2SS), protein F HKJ33_04985 PF08334 Type II secretion system (T2SS), protein G HKJ33_04990 PF12019 Type II transport protein GspH HKJ33_04995 PF07963 Prokaryotic N-terminal methylation motif HKJ33_05005 PF03934 Type II secretion system (T2SS), protein K HKJ33_05010 PF05137 Fimbrial assembly protein (PilN) HKJ33_05015 PF10741 Type II secretion system (T2SS), protein M subtype b HKJ33_05025 PF00263 Bacterial type II and III secretion system protein HKJ33_05025 PF03958 Bacterial type II/III secretion system short domain HKJ33_05030 PF05658 Head domain of trimeric autotransporter adhesin HKJ33_05030 PF03895 YadA-like membrane anchor domain HKJ33_05030 PF05662 Coiled stalk of trimeric autotransporter adhesin HKJ33_05035 PF00578 AhpC/TSA family HKJ33_05035 PF10417 C-terminal domain of 1-Cys peroxiredoxin HKJ33_05040 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKJ33_05040 PF13192 Thioredoxin domain HKJ33_05045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKJ33_05045 PF03466 LysR substrate binding domain HKJ33_05050 PF00814 Glycoprotease family HKJ33_05055 PF01197 Ribosomal protein L31 HKJ33_05060 PF00285 Citrate synthase, C-terminal domain HKJ33_05065 PF00380 Ribosomal protein S9/S16 HKJ33_05070 PF00572 Ribosomal protein L13 HKJ33_05075 PF03232 Ubiquinone biosynthesis protein COQ7 HKJ33_05080 PF02675 S-adenosylmethionine decarboxylase HKJ33_05085 PF00325 Bacterial regulatory proteins, crp family HKJ33_05085 PF00027 Cyclic nucleotide-binding domain HKJ33_05110 PF00899 ThiF family HKJ33_05120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKJ33_05120 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKJ33_05130 PF00364 Biotin-requiring enzyme HKJ33_05130 PF02817 e3 binding domain HKJ33_05130 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HKJ33_05135 PF16078 2-oxoglutarate dehydrogenase N-terminus HKJ33_05135 PF00676 Dehydrogenase E1 component HKJ33_05135 PF16870 2-oxoglutarate dehydrogenase C-terminal HKJ33_05135 PF02779 Transketolase, pyrimidine binding domain HKJ33_05140 PF08007 Cupin superfamily protein HKJ33_05145 PF00206 Lyase HKJ33_05145 PF08328 Adenylosuccinate lyase C-terminal HKJ33_05150 PF00206 Lyase HKJ33_05150 PF10415 Fumarase C C-terminus HKJ33_05165 PF00114 Pilin (bacterial filament) HKJ33_05165 PF07963 Prokaryotic N-terminal methylation motif HKJ33_05250 PF00959 Phage lysozyme HKJ33_05255 PF01555 DNA methylase HKJ33_05295 PF01134 Glucose inhibited division protein A HKJ33_05295 PF13932 GidA associated domain HKJ33_05320 PF13649 Methyltransferase domain HKJ33_05335 PF02649 Type I GTP cyclohydrolase folE2 HKJ33_05340 PF00132 Bacterial transferase hexapeptide (six repeats) HKJ33_05345 PF00873 AcrB/AcrD/AcrF family HKJ33_05350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKJ33_05350 PF00529 HlyD membrane-fusion protein of T1SS HKJ33_05355 PF05088 Bacterial NAD-glutamate dehydrogenase HKJ33_05360 PF01513 ATP-NAD kinase HKJ33_05375 PF00239 Resolvase, N terminal domain HKJ33_05375 PF02796 Helix-turn-helix domain of resolvase HKJ33_05380 PF00440 Bacterial regulatory proteins, tetR family HKJ33_05390 PF00873 AcrB/AcrD/AcrF family HKJ33_05425 PF00933 Glycosyl hydrolase family 3 N terminal domain HKJ33_05425 PF01915 Glycosyl hydrolase family 3 C-terminal domain HKJ33_05430 PF18818 Metallopeptidase superfamily domain HKJ33_05430 PF08401 Domain of unknown function (DUF1738) HKJ33_05430 PF13362 Toprim domain HKJ33_05435 PF12706 Beta-lactamase superfamily domain HKJ33_05445 PF00929 Exonuclease HKJ33_05445 PF08411 Exonuclease C-terminal HKJ33_05460 PF00999 Sodium/hydrogen exchanger family HKJ33_05470 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HKJ33_05480 PF01812 5-formyltetrahydrofolate cyclo-ligase family HKJ33_05490 PF05164 Cell division protein ZapA HKJ33_05500 PF03695 Uncharacterised protein family (UPF0149) HKJ33_05505 PF00557 Metallopeptidase family M24 HKJ33_05505 PF05195 Aminopeptidase P, N-terminal domain HKJ33_05510 PF00293 NUDIX domain HKJ33_05515 PF00881 Nitroreductase family HKJ33_05550 PF01063 Amino-transferase class IV HKJ33_05555 PF02954 Bacterial regulatory protein, Fis family HKJ33_05565 PF01381 Helix-turn-helix HKJ33_05575 PF00535 Glycosyl transferase family 2 HKJ33_05585 PF00925 GTP cyclohydrolase II HKJ33_05600 PF00773 RNB domain HKJ33_05600 PF00575 S1 RNA binding domain HKJ33_05600 PF08461 Ribonuclease R winged-helix domain HKJ33_05600 PF08206 Ribonuclease B OB domain HKJ33_05600 PF17876 Cold shock domain HKJ33_05605 PF00588 SpoU rRNA Methylase family HKJ33_05605 PF08032 RNA 2'-O ribose methyltransferase substrate binding HKJ33_05610 PF00132 Bacterial transferase hexapeptide (six repeats) HKJ33_05615 PF01227 GTP cyclohydrolase I HKJ33_05620 PF03895 YadA-like membrane anchor domain HKJ33_05620 PF05658 Head domain of trimeric autotransporter adhesin HKJ33_05620 PF05662 Coiled stalk of trimeric autotransporter adhesin HKJ33_05625 PF03186 CobD/Cbib protein HKJ33_05630 PF12805 FUSC-like inner membrane protein yccS HKJ33_05635 PF02843 Phosphoribosylglycinamide synthetase, C domain HKJ33_05635 PF02844 Phosphoribosylglycinamide synthetase, N domain HKJ33_05635 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HKJ33_05640 PF01808 AICARFT/IMPCHase bienzyme HKJ33_05640 PF02142 MGS-like domain HKJ33_05655 PF00588 SpoU rRNA Methylase family HKJ33_05665 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HKJ33_05665 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HKJ33_05685 PF00561 alpha/beta hydrolase fold HKJ33_05690 PF03692 Putative zinc- or iron-chelating domain HKJ33_05695 PF00795 Carbon-nitrogen hydrolase HKJ33_05695 PF02540 NAD synthase HKJ33_05700 PF02091 Glycyl-tRNA synthetase alpha subunit HKJ33_05705 PF02092 Glycyl-tRNA synthetase beta subunit HKJ33_05705 PF05746 DALR anticodon binding domain HKJ33_05720 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HKJ33_05720 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HKJ33_05725 PF00072 Response regulator receiver domain HKJ33_05730 PF01584 CheW-like domain HKJ33_05735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HKJ33_05735 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HKJ33_05740 PF00072 Response regulator receiver domain HKJ33_05740 PF02895 Signal transducing histidine kinase, homodimeric domain HKJ33_05740 PF01584 CheW-like domain HKJ33_05740 PF01627 Hpt domain HKJ33_05740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_05755 PF00156 Phosphoribosyl transferase domain HKJ33_05770 PF08245 Mur ligase middle domain HKJ33_05770 PF02875 Mur ligase family, glutamate ligase domain HKJ33_05780 PF01432 Peptidase family M3 HKJ33_05795 PF01625 Peptide methionine sulfoxide reductase HKJ33_05800 PF00375 Sodium:dicarboxylate symporter family HKJ33_05805 PF02780 Transketolase, C-terminal domain HKJ33_05805 PF02779 Transketolase, pyrimidine binding domain HKJ33_05805 PF00456 Transketolase, thiamine diphosphate binding domain HKJ33_05810 PF02527 rRNA small subunit methyltransferase G HKJ33_05815 PF01648 4'-phosphopantetheinyl transferase superfamily HKJ33_05835 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HKJ33_05835 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HKJ33_05840 PF02910 Fumarate reductase flavoprotein C-term HKJ33_05840 PF00890 FAD binding domain HKJ33_05845 PF02445 Quinolinate synthetase A protein HKJ33_05850 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HKJ33_05850 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HKJ33_05880 PF00425 chorismate binding enzyme HKJ33_05880 PF04715 Anthranilate synthase component I, N terminal region HKJ33_05885 PF01026 TatD related DNase HKJ33_05900 PF02881 SRP54-type protein, helical bundle domain HKJ33_05900 PF00448 SRP54-type protein, GTPase domain HKJ33_05905 PF14815 NUDIX domain HKJ33_05905 PF00633 Helix-hairpin-helix motif HKJ33_05905 PF00730 HhH-GPD superfamily base excision DNA repair protein HKJ33_05910 PF04362 Bacterial Fe(2+) trafficking HKJ33_05920 PF01709 Transcriptional regulator HKJ33_05925 PF02075 Crossover junction endodeoxyribonuclease RuvC HKJ33_05930 PF01330 RuvA N terminal domain HKJ33_05930 PF07499 RuvA, C-terminal domain HKJ33_05935 PF02705 K+ potassium transporter HKJ33_05940 PF05496 Holliday junction DNA helicase RuvB P-loop domain HKJ33_05940 PF05491 RuvB C-terminal winged helix domain HKJ33_05940 PF17864 RuvB AAA lid domain HKJ33_05945 PF03061 Thioesterase superfamily HKJ33_05950 PF01618 MotA/TolQ/ExbB proton channel family HKJ33_05955 PF02472 Biopolymer transport protein ExbD/TolR HKJ33_05965 PF04052 TolB amino-terminal domain HKJ33_05965 PF07676 WD40-like Beta Propeller Repeat HKJ33_05970 PF00691 OmpA family HKJ33_05980 PF04055 Radical SAM superfamily HKJ33_05985 PF00300 Histidine phosphatase superfamily (branch 1) HKJ33_05990 PF04493 Endonuclease V HKJ33_05995 PF00854 POT family HKJ33_06000 PF00255 Glutathione peroxidase HKJ33_06005 PF00175 Oxidoreductase NAD-binding domain HKJ33_06005 PF00970 Oxidoreductase FAD-binding domain HKJ33_06010 PF13667 ThiC-associated domain HKJ33_06010 PF01964 Radical SAM ThiC family HKJ33_06015 PF10459 Peptidase S46 HKJ33_06020 PF00300 Histidine phosphatase superfamily (branch 1) HKJ33_06195 PF06508 Queuosine biosynthesis protein QueC HKJ33_06200 PF02938 GAD domain HKJ33_06200 PF00152 tRNA synthetases class II (D, K and N) HKJ33_06200 PF01336 OB-fold nucleic acid binding domain HKJ33_06205 PF05681 Fumarate hydratase (Fumerase) HKJ33_06205 PF05683 Fumarase C-terminus HKJ33_06225 PF00082 Subtilase family HKJ33_06225 PF12951 Passenger-associated-transport-repeat HKJ33_06225 PF03797 Autotransporter beta-domain HKJ33_06245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_06245 PF00989 PAS fold HKJ33_06245 PF00512 His Kinase A (phospho-acceptor) domain HKJ33_06250 PF00158 Sigma-54 interaction domain HKJ33_06250 PF00072 Response regulator receiver domain HKJ33_06250 PF02954 Bacterial regulatory protein, Fis family HKJ33_06265 PF00909 Ammonium Transporter Family HKJ33_06270 PF00543 Nitrogen regulatory protein P-II HKJ33_06275 PF00120 Glutamine synthetase, catalytic domain HKJ33_06275 PF03951 Glutamine synthetase, beta-Grasp domain HKJ33_06280 PF02673 Bacitracin resistance protein BacA HKJ33_06285 PF04264 YceI-like domain HKJ33_06390 PF00959 Phage lysozyme HKJ33_06395 PF01555 DNA methylase HKJ33_06490 PF10548 P22AR C-terminal domain HKJ33_06490 PF02498 BRO family, N-terminal domain HKJ33_06520 PF02899 Phage integrase, N-terminal SAM-like domain HKJ33_06520 PF00589 Phage integrase family HKJ33_06535 PF12241 Trans-2-enoyl-CoA reductase catalytic region HKJ33_06535 PF07055 Enoyl reductase FAD binding domain HKJ33_06535 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HKJ33_06545 PF03109 ABC1 family HKJ33_06555 PF00551 Formyl transferase HKJ33_06560 PF02492 CobW/HypB/UreG, nucleotide-binding domain HKJ33_06560 PF07683 Cobalamin synthesis protein cobW C-terminal domain HKJ33_06570 PF03969 AFG1-like ATPase HKJ33_06575 PF02566 OsmC-like protein HKJ33_06580 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family HKJ33_06585 PF03572 Peptidase family S41 HKJ33_06585 PF00595 PDZ domain HKJ33_06585 PF17804 Tail specific protease N-terminal domain HKJ33_06585 PF11818 C-terminal domain of tail specific protease (DUF3340) HKJ33_06590 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HKJ33_06590 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HKJ33_06595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HKJ33_06595 PF00205 Thiamine pyrophosphate enzyme, central domain HKJ33_06595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HKJ33_06605 PF00291 Pyridoxal-phosphate dependent enzyme HKJ33_06610 PF08502 LeuA allosteric (dimerisation) domain HKJ33_06610 PF00682 HMGL-like HKJ33_06615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HKJ33_06615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HKJ33_06620 PF01783 Ribosomal L32p protein family HKJ33_06625 PF02620 Large ribosomal RNA subunit accumulation protein YceD HKJ33_06635 PF07726 ATPase family associated with various cellular activities (AAA) HKJ33_06635 PF17863 AAA lid domain HKJ33_06645 PF11992 Domain of unknown function (DUF3488) HKJ33_06645 PF13559 Domain of unknown function (DUF4129) HKJ33_06645 PF01841 Transglutaminase-like superfamily HKJ33_06655 PF01230 HIT domain HKJ33_06660 PF02132 RecR protein HKJ33_06660 PF13662 Toprim domain HKJ33_06665 PF02575 YbaB/EbfC DNA-binding family HKJ33_06670 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HKJ33_06670 PF12170 DNA polymerase III tau subunit V interacting with alpha HKJ33_06670 PF12169 DNA polymerase III subunits gamma and tau domain III HKJ33_06700 PF02556 Preprotein translocase subunit SecB HKJ33_06705 PF00581 Rhodanese-like domain HKJ33_06730 PF02237 Biotin protein ligase C terminal domain HKJ33_06730 PF03099 Biotin/lipoate A/B protein ligase family HKJ33_06730 PF08279 HTH domain HKJ33_06735 PF03309 Type III pantothenate kinase HKJ33_06760 PF07963 Prokaryotic N-terminal methylation motif HKJ33_06775 PF01168 Alanine racemase, N-terminal domain HKJ33_06780 PF00488 MutS domain V HKJ33_06780 PF05190 MutS family domain IV HKJ33_06780 PF05192 MutS domain III HKJ33_06780 PF05188 MutS domain II HKJ33_06780 PF01624 MutS domain I HKJ33_06785 PF00912 Transglycosylase HKJ33_06790 PF01430 Hsp33 protein HKJ33_06800 PF01042 Endoribonuclease L-PSP HKJ33_06805 PF03706 Lysylphosphatidylglycerol synthase TM region HKJ33_06805 PF09924 Uncharacterised conserved protein (DUF2156) HKJ33_06815 PF02801 Beta-ketoacyl synthase, C-terminal domain HKJ33_06815 PF00109 Beta-ketoacyl synthase, N-terminal domain HKJ33_06825 PF00535 Glycosyl transferase family 2 HKJ33_06840 PF00437 Type II/IV secretion system protein HKJ33_06845 PF00437 Type II/IV secretion system protein HKJ33_06860 PF03900 Porphobilinogen deaminase, C-terminal domain HKJ33_06860 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HKJ33_06865 PF04397 LytTr DNA-binding domain HKJ33_06865 PF00072 Response regulator receiver domain HKJ33_06870 PF07694 5TMR of 5TMR-LYT HKJ33_06870 PF06580 Histidine kinase HKJ33_06875 PF02230 Phospholipase/Carboxylesterase HKJ33_06880 PF13632 Glycosyl transferase family group 2 HKJ33_06895 PF01209 ubiE/COQ5 methyltransferase family HKJ33_06910 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HKJ33_06925 PF00294 pfkB family carbohydrate kinase HKJ33_06930 PF07690 Major Facilitator Superfamily HKJ33_06940 PF04102 SlyX HKJ33_06945 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HKJ33_06945 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HKJ33_06945 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HKJ33_06950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKJ33_06950 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HKJ33_06960 PF00005 ABC transporter HKJ33_07030 PF10876 Phage tail assemb.y chaperone protein, TAC HKJ33_07085 PF04233 Phage Mu protein F like protein HKJ33_07090 PF06381 Protein of unknown function (DUF1073) HKJ33_07120 PF00959 Phage lysozyme HKJ33_07140 PF01066 CDP-alcohol phosphatidyltransferase HKJ33_07165 PF00490 Delta-aminolevulinic acid dehydratase HKJ33_07170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKJ33_07185 PF00202 Aminotransferase class-III HKJ33_07190 PF10609 NUBPL iron-transfer P-loop NTPase HKJ33_07195 PF02348 Cytidylyltransferase HKJ33_07200 PF01451 Low molecular weight phosphotyrosine protein phosphatase HKJ33_07225 PF08459 UvrC Helix-hairpin-helix N-terminal HKJ33_07225 PF02151 UvrB/uvrC motif HKJ33_07225 PF01541 GIY-YIG catalytic domain HKJ33_07230 PF01066 CDP-alcohol phosphatidyltransferase HKJ33_07255 PF00490 Delta-aminolevulinic acid dehydratase HKJ33_07260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HKJ33_07280 PF10609 NUBPL iron-transfer P-loop NTPase HKJ33_07285 PF02348 Cytidylyltransferase HKJ33_07290 PF01451 Low molecular weight phosphotyrosine protein phosphatase HKJ33_07335 PF00436 Single-strand binding protein family HKJ33_07350 PF12848 ABC transporter HKJ33_07350 PF00005 ABC transporter HKJ33_07355 PF07715 TonB-dependent Receptor Plug Domain HKJ33_07355 PF00593 TonB dependent receptor HKJ33_07365 PF00593 TonB dependent receptor HKJ33_07365 PF07715 TonB-dependent Receptor Plug Domain HKJ33_07370 PF00999 Sodium/hydrogen exchanger family HKJ33_07370 PF02254 TrkA-N domain HKJ33_07375 PF12849 PBP superfamily domain HKJ33_07380 PF00528 Binding-protein-dependent transport system inner membrane component HKJ33_07385 PF00528 Binding-protein-dependent transport system inner membrane component HKJ33_07390 PF00005 ABC transporter HKJ33_07395 PF01895 PhoU domain HKJ33_07400 PF00929 Exonuclease HKJ33_07405 PF00398 Ribosomal RNA adenine dimethylase HKJ33_07410 PF04379 ApaG domain HKJ33_07415 PF00149 Calcineurin-like phosphoesterase HKJ33_07435 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HKJ33_07455 PF00929 Exonuclease HKJ33_07460 PF00075 RNase H HKJ33_07470 PF16123 Hydroxyacylglutathione hydrolase C-terminus HKJ33_07470 PF00753 Metallo-beta-lactamase superfamily HKJ33_07485 PF16921 Tex protein YqgF-like domain HKJ33_07485 PF17674 HHH domain HKJ33_07485 PF00575 S1 RNA binding domain HKJ33_07485 PF09371 Tex-like protein N-terminal domain HKJ33_07500 PF00719 Inorganic pyrophosphatase HKJ33_07505 PF00085 Thioredoxin HKJ33_07515 PF13603 Leucyl-tRNA synthetase, Domain 2 HKJ33_07515 PF08264 Anticodon-binding domain of tRNA HKJ33_07515 PF00133 tRNA synthetases class I (I, L, M and V) HKJ33_07530 PF01467 Cytidylyltransferase-like HKJ33_07560 PF13406 Transglycosylase SLT domain HKJ33_07565 PF05036 Sporulation related domain HKJ33_07565 PF03330 Lytic transglycolase HKJ33_07685 PF08207 Elongation factor P (EF-P) KOW-like domain HKJ33_07685 PF09285 Elongation factor P, C-terminal HKJ33_07685 PF01132 Elongation factor P (EF-P) OB domain HKJ33_07690 PF01565 FAD binding domain HKJ33_07690 PF02913 FAD linked oxidases, C-terminal domain HKJ33_07695 PF01842 ACT domain HKJ33_07695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HKJ33_07695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HKJ33_07700 PF13520 Amino acid permease HKJ33_07705 PF13520 Amino acid permease HKJ33_07710 PF00596 Class II Aldolase and Adducin N-terminal domain HKJ33_07715 PF03079 ARD/ARD' family HKJ33_07725 PF01502 Phosphoribosyl-AMP cyclohydrolase HKJ33_07725 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HKJ33_07730 PF00977 Histidine biosynthesis protein HKJ33_07735 PF00977 Histidine biosynthesis protein HKJ33_07740 PF00117 Glutamine amidotransferase class-I HKJ33_07745 PF00475 Imidazoleglycerol-phosphate dehydratase HKJ33_07750 PF00155 Aminotransferase class I and II HKJ33_07755 PF00815 Histidinol dehydrogenase HKJ33_07760 PF08029 HisG, C-terminal domain HKJ33_07760 PF01634 ATP phosphoribosyltransferase HKJ33_07770 PF13393 Histidyl-tRNA synthetase HKJ33_07770 PF03129 Anticodon binding domain HKJ33_07775 PF00291 Pyridoxal-phosphate dependent enzyme HKJ33_07775 PF14821 Threonine synthase N terminus HKJ33_07780 PF00288 GHMP kinases N terminal domain HKJ33_07780 PF08544 GHMP kinases C terminal HKJ33_07785 PF00742 Homoserine dehydrogenase HKJ33_07785 PF13840 ACT domain HKJ33_07785 PF01842 ACT domain HKJ33_07785 PF00696 Amino acid kinase family HKJ33_07785 PF03447 Homoserine dehydrogenase, NAD binding domain HKJ33_07790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HKJ33_07790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HKJ33_07795 PF03652 Holliday junction resolvase HKJ33_07800 PF02622 Uncharacterized ACR, COG1678 HKJ33_07805 PF07943 Penicillin-binding protein 5, C-terminal domain HKJ33_07805 PF00768 D-alanyl-D-alanine carboxypeptidase HKJ33_07815 PF00141 Peroxidase HKJ33_07820 PF00226 DnaJ domain HKJ33_07820 PF01556 DnaJ C terminal domain HKJ33_07830 PF06832 Penicillin-Binding Protein C-terminus Family HKJ33_07830 PF00905 Penicillin binding protein transpeptidase domain HKJ33_07830 PF00912 Transglycosylase HKJ33_07840 PF00593 TonB dependent receptor HKJ33_07840 PF07715 TonB-dependent Receptor Plug Domain HKJ33_07845 PF04542 Sigma-70 region 2 HKJ33_07845 PF08281 Sigma-70, region 4 HKJ33_07855 PF13180 PDZ domain HKJ33_07860 PF00679 Elongation factor G C-terminus HKJ33_07860 PF03144 Elongation factor Tu domain 2 HKJ33_07860 PF00009 Elongation factor Tu GTP binding domain HKJ33_07860 PF06421 GTP-binding protein LepA C-terminus HKJ33_07865 PF10502 Signal peptidase, peptidase S26 HKJ33_07875 PF00035 Double-stranded RNA binding motif HKJ33_07875 PF14622 Ribonuclease-III-like HKJ33_07880 PF07650 KH domain HKJ33_07880 PF01926 50S ribosome-binding GTPase HKJ33_07885 PF11967 Recombination protein O N terminal HKJ33_07885 PF02565 Recombination protein O C terminal HKJ33_07890 PF02780 Transketolase, C-terminal domain HKJ33_07890 PF02779 Transketolase, pyrimidine binding domain HKJ33_07890 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HKJ33_07895 PF00474 Sodium:solute symporter family HKJ33_07905 PF13193 AMP-binding enzyme C-terminal domain HKJ33_07905 PF16177 Acetyl-coenzyme A synthetase N-terminus HKJ33_07905 PF00501 AMP-binding enzyme HKJ33_07910 PF02659 Putative manganese efflux pump HKJ33_07925 PF07676 WD40-like Beta Propeller Repeat HKJ33_07925 PF00326 Prolyl oligopeptidase family HKJ33_07925 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region HKJ33_07930 PF03169 OPT oligopeptide transporter protein HKJ33_07940 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HKJ33_07940 PF01266 FAD dependent oxidoreductase HKJ33_07945 PF00230 Major intrinsic protein HKJ33_07950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HKJ33_07950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HKJ33_07960 PF01263 Aldose 1-epimerase HKJ33_07965 PF01717 Cobalamin-independent synthase, Catalytic domain HKJ33_07965 PF08267 Cobalamin-independent synthase, N-terminal domain HKJ33_07970 PF02677 Epoxyqueuosine reductase QueH HKJ33_07975 PF00857 Isochorismatase family HKJ33_07980 PF00501 AMP-binding enzyme HKJ33_07990 PF00535 Glycosyl transferase family 2 HKJ33_07995 PF01370 NAD dependent epimerase/dehydratase family HKJ33_08000 PF17762 HTH domain found in ParB protein HKJ33_08000 PF02195 ParB-like nuclease domain HKJ33_08005 PF13614 AAA domain HKJ33_08015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKJ33_08015 PF02403 Seryl-tRNA synthetase N-terminal domain HKJ33_08020 PF03544 Gram-negative bacterial TonB protein C-terminal HKJ33_08060 PF01555 DNA methylase HKJ33_08065 PF00959 Phage lysozyme HKJ33_08120 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HKJ33_08125 PF01817 Chorismate mutase type II HKJ33_08125 PF01842 ACT domain HKJ33_08125 PF00800 Prephenate dehydratase HKJ33_08130 PF00266 Aminotransferase class-V HKJ33_08140 PF12679 ABC-2 family transporter protein HKJ33_08145 PF00005 ABC transporter HKJ33_08155 PF00186 Dihydrofolate reductase HKJ33_08160 PF00303 Thymidylate synthase HKJ33_08165 PF01790 Prolipoprotein diacylglyceryl transferase HKJ33_08170 PF01219 Prokaryotic diacylglycerol kinase HKJ33_08175 PF00486 Transcriptional regulatory protein, C terminal HKJ33_08175 PF00072 Response regulator receiver domain HKJ33_08185 PF02153 Prephenate dehydrogenase HKJ33_08185 PF01817 Chorismate mutase type II HKJ33_08190 PF00684 DnaJ central domain HKJ33_08190 PF00226 DnaJ domain HKJ33_08190 PF01556 DnaJ C terminal domain HKJ33_08195 PF00012 Hsp70 protein HKJ33_08200 PF01025 GrpE HKJ33_08205 PF01628 HrcA protein C terminal domain HKJ33_08205 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HKJ33_08210 PF02463 RecF/RecN/SMC N terminal domain HKJ33_08215 PF01475 Ferric uptake regulator family HKJ33_08220 PF04355 SmpA / OmlA family HKJ33_08225 PF03658 RnfH family Ubiquitin HKJ33_08235 PF01668 SmpB protein HKJ33_08245 PF00313 'Cold-shock' DNA-binding domain HKJ33_08250 PF01048 Phosphorylase superfamily HKJ33_08260 PF00933 Glycosyl hydrolase family 3 N terminal domain HKJ33_08265 PF01928 CYTH domain HKJ33_08270 PF05958 tRNA (Uracil-5-)-methyltransferase HKJ33_08275 PF00072 Response regulator receiver domain HKJ33_08275 PF00486 Transcriptional regulatory protein, C terminal HKJ33_08280 PF03808 Glycosyl transferase WecB/TagA/CpsF family HKJ33_08290 PF14667 Polysaccharide biosynthesis C-terminal domain HKJ33_08300 PF13439 Glycosyltransferase Family 4 HKJ33_08300 PF00534 Glycosyl transferases group 1 HKJ33_08315 PF02397 Bacterial sugar transferase HKJ33_08330 PF00180 Isocitrate/isopropylmalate dehydrogenase HKJ33_08335 PF00694 Aconitase C-terminal domain HKJ33_08340 PF00330 Aconitase family (aconitate hydratase) HKJ33_08360 PF14489 QueF-like protein HKJ33_08360 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HKJ33_08365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HKJ33_08370 PF00873 AcrB/AcrD/AcrF family HKJ33_08375 PF00873 AcrB/AcrD/AcrF family HKJ33_08385 PF08240 Alcohol dehydrogenase GroES-like domain HKJ33_08385 PF00107 Zinc-binding dehydrogenase HKJ33_08405 PF00462 Glutaredoxin HKJ33_08410 PF01522 Polysaccharide deacetylase HKJ33_08430 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HKJ33_08440 PF02796 Helix-turn-helix domain of resolvase HKJ33_08440 PF00239 Resolvase, N terminal domain HKJ33_08445 PF12323 Helix-turn-helix domain HKJ33_08445 PF01385 Probable transposase HKJ33_08445 PF07282 Putative transposase DNA-binding domain HKJ33_08450 PF00239 Resolvase, N terminal domain HKJ33_08455 PF00155 Aminotransferase class I and II HKJ33_08460 PF03412 Peptidase C39 family HKJ33_08460 PF00005 ABC transporter HKJ33_08460 PF00664 ABC transporter transmembrane region HKJ33_08485 PF06594 Haemolysin-type calcium binding protein related domain HKJ33_08485 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKJ33_08505 PF02401 LytB protein HKJ33_08510 PF01252 Signal peptidase (SPase) II HKJ33_08515 PF08264 Anticodon-binding domain of tRNA HKJ33_08515 PF00133 tRNA synthetases class I (I, L, M and V) HKJ33_08515 PF06827 Zinc finger found in FPG and IleRS HKJ33_08520 PF01687 Riboflavin kinase HKJ33_08520 PF06574 FAD synthetase HKJ33_08525 PF03023 Lipid II flippase MurJ HKJ33_08530 PF01649 Ribosomal protein S20 HKJ33_08535 PF01926 50S ribosome-binding GTPase HKJ33_08535 PF01018 GTP1/OBG HKJ33_08540 PF01016 Ribosomal L27 protein HKJ33_08545 PF00829 Ribosomal prokaryotic L21 protein HKJ33_08550 PF00005 ABC transporter HKJ33_08550 PF17755 UvrA DNA-binding domain HKJ33_08550 PF17760 UvrA interaction domain HKJ33_08560 PF02540 NAD synthase HKJ33_08560 PF00958 GMP synthase C terminal domain HKJ33_08560 PF00117 Glutamine amidotransferase class-I HKJ33_08565 PF00571 CBS domain HKJ33_08565 PF00478 IMP dehydrogenase / GMP reductase domain HKJ33_08570 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HKJ33_08570 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HKJ33_08575 PF00483 Nucleotidyl transferase HKJ33_08580 PF02719 Polysaccharide biosynthesis protein HKJ33_08585 PF00953 Glycosyl transferase family 4 HKJ33_08590 PF18073 Rubredoxin metal binding domain HKJ33_08600 PF00216 Bacterial DNA-binding protein HKJ33_08605 PF00575 S1 RNA binding domain HKJ33_08610 PF02224 Cytidylate kinase HKJ33_08615 PF00444 Ribosomal protein L36 HKJ33_08625 PF04371 Porphyromonas-type peptidyl-arginine deiminase HKJ33_08630 PF00795 Carbon-nitrogen hydrolase HKJ33_08645 PF00528 Binding-protein-dependent transport system inner membrane component HKJ33_08650 PF00528 Binding-protein-dependent transport system inner membrane component HKJ33_08670 PF02616 Segregation and condensation protein ScpA HKJ33_08675 PF04079 Segregation and condensation complex subunit ScpB HKJ33_08680 PF01479 S4 domain HKJ33_08680 PF00849 RNA pseudouridylate synthase HKJ33_08690 PF00795 Carbon-nitrogen hydrolase HKJ33_08695 PF00155 Aminotransferase class I and II HKJ33_08700 PF00005 ABC transporter HKJ33_08705 PF03379 CcmB protein HKJ33_08710 PF01578 Cytochrome C assembly protein HKJ33_08720 PF03100 CcmE HKJ33_08725 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HKJ33_08725 PF01578 Cytochrome C assembly protein HKJ33_08730 PF08534 Redoxin HKJ33_08735 PF03918 Cytochrome C biogenesis protein HKJ33_08750 PF00561 alpha/beta hydrolase fold HKJ33_08760 PF00295 Glycosyl hydrolases family 28 HKJ33_08770 PF13419 Haloacid dehalogenase-like hydrolase HKJ33_08780 PF01979 Amidohydrolase family HKJ33_08785 PF09285 Elongation factor P, C-terminal HKJ33_08785 PF08207 Elongation factor P (EF-P) KOW-like domain HKJ33_08785 PF01132 Elongation factor P (EF-P) OB domain HKJ33_08790 PF04055 Radical SAM superfamily HKJ33_08795 PF00588 SpoU rRNA Methylase family HKJ33_08800 PF00459 Inositol monophosphatase family HKJ33_08825 PF09115 DNA polymerase III, delta subunit, C terminal HKJ33_08830 PF02618 YceG-like family HKJ33_08835 PF00425 chorismate binding enzyme HKJ33_08835 PF04715 Anthranilate synthase component I, N terminal region HKJ33_08840 PF00109 Beta-ketoacyl synthase, N-terminal domain HKJ33_08840 PF02801 Beta-ketoacyl synthase, C-terminal domain HKJ33_08845 PF00550 Phosphopantetheine attachment site HKJ33_08855 PF00698 Acyl transferase domain HKJ33_08860 PF00456 Transketolase, thiamine diphosphate binding domain HKJ33_08860 PF17831 Pyruvate dehydrogenase E1 component middle domain HKJ33_08865 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKJ33_08865 PF06594 Haemolysin-type calcium binding protein related domain HKJ33_08895 PF00348 Polyprenyl synthetase HKJ33_08900 PF02609 Exonuclease VII small subunit HKJ33_08905 PF11734 TilS substrate C-terminal domain HKJ33_08905 PF09179 TilS substrate binding domain HKJ33_08905 PF01171 PP-loop family HKJ33_08915 PF00245 Alkaline phosphatase HKJ33_08920 PF00375 Sodium:dicarboxylate symporter family HKJ33_08925 PF00877 NlpC/P60 family HKJ33_08930 PF00877 NlpC/P60 family HKJ33_08935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKJ33_08940 PF04235 Protein of unknown function (DUF418) HKJ33_08955 PF00730 HhH-GPD superfamily base excision DNA repair protein HKJ33_08955 PF10576 Iron-sulfur binding domain of endonuclease III HKJ33_08955 PF00633 Helix-hairpin-helix motif HKJ33_08965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HKJ33_08965 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HKJ33_08980 PF01555 DNA methylase HKJ33_09070 PF08501 Shikimate dehydrogenase substrate binding domain HKJ33_09070 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HKJ33_09070 PF01488 Shikimate / quinate 5-dehydrogenase HKJ33_09080 PF08543 Phosphomethylpyrimidine kinase HKJ33_09080 PF02581 Thiamine monophosphate synthase HKJ33_09085 PF11412 Disulphide bond corrector protein DsbC HKJ33_09085 PF02683 Cytochrome C biogenesis protein transmembrane region HKJ33_09090 PF03091 CutA1 divalent ion tolerance protein HKJ33_09095 PF00166 Chaperonin 10 Kd subunit HKJ33_09100 PF00118 TCP-1/cpn60 chaperonin family HKJ33_09125 PF01370 NAD dependent epimerase/dehydratase family HKJ33_09130 PF01370 NAD dependent epimerase/dehydratase family HKJ33_09135 PF16363 GDP-mannose 4,6 dehydratase HKJ33_09150 PF00291 Pyridoxal-phosphate dependent enzyme HKJ33_09170 PF07715 TonB-dependent Receptor Plug Domain HKJ33_09170 PF00593 TonB dependent receptor HKJ33_09175 PF13640 2OG-Fe(II) oxygenase superfamily HKJ33_09175 PF18331 PKHD-type hydroxylase C-terminal domain HKJ33_09195 PF02424 ApbE family HKJ33_09205 PF01636 Phosphotransferase enzyme family HKJ33_09210 PF00483 Nucleotidyl transferase HKJ33_09215 PF00308 Bacterial dnaA protein HKJ33_09220 PF01594 AI-2E family transporter HKJ33_09230 PF00586 AIR synthase related protein, N-terminal domain HKJ33_09230 PF02769 AIR synthase related protein, C-terminal domain HKJ33_09235 PF00551 Formyl transferase HKJ33_09250 PF02223 Thymidylate kinase HKJ33_09260 PF05649 Peptidase family M13 HKJ33_09260 PF01431 Peptidase family M13 HKJ33_09265 PF07977 FabA-like domain HKJ33_09270 PF01171 PP-loop family HKJ33_09275 PF04381 Putative exonuclease, RdgC HKJ33_09285 PF00762 Ferrochelatase HKJ33_09295 PF02416 mttA/Hcf106 family HKJ33_09300 PF02416 mttA/Hcf106 family HKJ33_09305 PF00902 Sec-independent protein translocase protein (TatC) HKJ33_09315 PF00117 Glutamine amidotransferase class-I HKJ33_09315 PF00958 GMP synthase C terminal domain HKJ33_09330 PF00127 Copper binding proteins, plastocyanin/azurin family HKJ33_09335 PF03193 RsgA GTPase HKJ33_09340 PF02021 Uncharacterised protein family UPF0102 HKJ33_09345 PF04348 LppC putative lipoprotein HKJ33_09350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKJ33_09355 PF07715 TonB-dependent Receptor Plug Domain HKJ33_09355 PF00593 TonB dependent receptor HKJ33_09360 PF09334 tRNA synthetases class I (M) HKJ33_09360 PF01588 Putative tRNA binding domain HKJ33_09365 PF04060 Putative Fe-S cluster HKJ33_09420 PF02086 D12 class N6 adenine-specific DNA methyltransferase HKJ33_09445 PF07963 Prokaryotic N-terminal methylation motif HKJ33_09445 PF00114 Pilin (bacterial filament) HKJ33_09450 PF05567 Neisseria PilC beta-propeller domain HKJ33_09470 PF07963 Prokaryotic N-terminal methylation motif HKJ33_09470 PF00114 Pilin (bacterial filament) HKJ33_09475 PF03641 Possible lysine decarboxylase HKJ33_09475 PF11892 Domain of unknown function (DUF3412) HKJ33_09475 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HKJ33_09480 PF00563 EAL domain HKJ33_09480 PF12792 CSS motif domain associated with EAL HKJ33_09485 PF00899 ThiF family HKJ33_09490 PF01926 50S ribosome-binding GTPase HKJ33_09490 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HKJ33_09495 PF01011 PQQ enzyme repeat HKJ33_09495 PF13360 PQQ-like domain HKJ33_09515 PF04055 Radical SAM superfamily HKJ33_09520 PF00334 Nucleoside diphosphate kinase HKJ33_09525 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HKJ33_09525 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HKJ33_09530 PF00709 Adenylosuccinate synthetase HKJ33_09540 PF01145 SPFH domain / Band 7 family HKJ33_09545 PF12221 Bacterial membrane protein N terminal HKJ33_09545 PF01145 SPFH domain / Band 7 family HKJ33_09550 PF08240 Alcohol dehydrogenase GroES-like domain HKJ33_09550 PF00107 Zinc-binding dehydrogenase HKJ33_09555 PF00072 Response regulator receiver domain HKJ33_09570 PF03129 Anticodon binding domain HKJ33_09570 PF04073 Aminoacyl-tRNA editing domain HKJ33_09570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKJ33_09580 PF01066 CDP-alcohol phosphatidyltransferase HKJ33_09595 PF00933 Glycosyl hydrolase family 3 N terminal domain HKJ33_09595 PF14310 Fibronectin type III-like domain HKJ33_09595 PF01915 Glycosyl hydrolase family 3 C-terminal domain HKJ33_09600 PF00924 Mechanosensitive ion channel HKJ33_09605 PF02152 Dihydroneopterin aldolase HKJ33_09610 PF00814 Glycoprotease family HKJ33_09615 PF01165 Ribosomal protein S21 HKJ33_09620 PF09424 Yqey-like protein HKJ33_09625 PF03631 Virulence factor BrkB HKJ33_09630 PF08278 DNA primase DnaG DnaB-binding HKJ33_09630 PF08275 DNA primase catalytic core, N-terminal domain HKJ33_09630 PF01807 CHC2 zinc finger HKJ33_09630 PF10410 DnaB-helicase binding domain of primase HKJ33_09640 PF01555 DNA methylase HKJ33_09645 PF00579 tRNA synthetases class I (W and Y) HKJ33_09655 PF13538 UvrD-like helicase C-terminal domain HKJ33_09665 PF13361 UvrD-like helicase C-terminal domain HKJ33_09665 PF12705 PD-(D/E)XK nuclease superfamily HKJ33_09665 PF00580 UvrD/REP helicase N-terminal domain HKJ33_09670 PF17946 RecC C-terminal domain HKJ33_09675 PF00005 ABC transporter HKJ33_09680 PF02405 Permease MlaE HKJ33_09690 PF05494 MlaC protein HKJ33_09700 PF04333 MlaA lipoprotein HKJ33_09710 PF02646 RmuC family HKJ33_09715 PF00005 ABC transporter HKJ33_09725 PF13520 Amino acid permease HKJ33_09730 PF17785 PUA-like domain HKJ33_09730 PF10672 S-adenosylmethionine-dependent methyltransferase HKJ33_09735 PF03741 Integral membrane protein TerC family HKJ33_09740 PF01521 Iron-sulphur cluster biosynthesis HKJ33_09760 PF00486 Transcriptional regulatory protein, C terminal HKJ33_09760 PF00072 Response regulator receiver domain HKJ33_09775 PF00210 Ferritin-like domain HKJ33_09785 PF00293 NUDIX domain HKJ33_09800 PF02773 S-adenosylmethionine synthetase, C-terminal domain HKJ33_09800 PF02772 S-adenosylmethionine synthetase, central domain HKJ33_09800 PF00438 S-adenosylmethionine synthetase, N-terminal domain HKJ33_09805 PF08918 PhoQ Sensor HKJ33_09805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_09810 PF00072 Response regulator receiver domain HKJ33_09810 PF00486 Transcriptional regulatory protein, C terminal HKJ33_09820 PF01207 Dihydrouridine synthase (Dus) HKJ33_09830 PF07715 TonB-dependent Receptor Plug Domain HKJ33_09830 PF00593 TonB dependent receptor HKJ33_09845 PF07724 AAA domain (Cdc48 subfamily) HKJ33_09845 PF00004 ATPase family associated with various cellular activities (AAA) HKJ33_09845 PF02861 Clp amino terminal domain, pathogenicity island component HKJ33_09845 PF17871 AAA lid domain HKJ33_09845 PF10431 C-terminal, D2-small domain, of ClpB protein HKJ33_09850 PF00301 Rubredoxin HKJ33_09855 PF02581 Thiamine monophosphate synthase HKJ33_09860 PF00067 Cytochrome P450 HKJ33_09865 PF00884 Sulfatase HKJ33_09865 PF08019 Phosphoethanolamine transferase EptA/EptB HKJ33_09875 PF03958 Bacterial type II/III secretion system short domain HKJ33_09875 PF07660 Secretin and TonB N terminus short domain HKJ33_09875 PF11741 AMIN domain HKJ33_09875 PF00263 Bacterial type II and III secretion system protein HKJ33_09900 PF17092 Penicillin-binding protein OB-like domain HKJ33_09900 PF00912 Transglycosylase HKJ33_09900 PF00905 Penicillin binding protein transpeptidase domain HKJ33_09905 PF00248 Aldo/keto reductase family HKJ33_09910 PF00294 pfkB family carbohydrate kinase HKJ33_09915 PF00691 OmpA family HKJ33_09915 PF05736 OprF membrane domain HKJ33_09920 PF03796 DnaB-like helicase C terminal domain HKJ33_09920 PF00772 DnaB-like helicase N terminal domain HKJ33_09930 PF00067 Cytochrome P450 HKJ33_09940 PF00270 DEAD/DEAH box helicase HKJ33_09940 PF17191 RecG wedge domain HKJ33_09940 PF00271 Helicase conserved C-terminal domain HKJ33_09945 PF01042 Endoribonuclease L-PSP HKJ33_09950 PF04607 Region found in RelA / SpoT proteins HKJ33_09950 PF13291 ACT domain HKJ33_09950 PF02824 TGS domain HKJ33_09955 PF01565 FAD binding domain HKJ33_09955 PF02913 FAD linked oxidases, C-terminal domain HKJ33_09960 PF05736 OprF membrane domain HKJ33_09960 PF00691 OmpA family HKJ33_09965 PF02600 Disulfide bond formation protein DsbB HKJ33_09970 PF00593 TonB dependent receptor HKJ33_09970 PF07715 TonB-dependent Receptor Plug Domain HKJ33_09975 PF02590 Predicted SPOUT methyltransferase HKJ33_10030 PF17757 UvrB interaction domain HKJ33_10030 PF04851 Type III restriction enzyme, res subunit HKJ33_10030 PF00271 Helicase conserved C-terminal domain HKJ33_10030 PF12344 Ultra-violet resistance protein B HKJ33_10030 PF02151 UvrB/uvrC motif HKJ33_10045 PF00701 Dihydrodipicolinate synthetase family HKJ33_10055 PF00578 AhpC/TSA family HKJ33_10075 PF02769 AIR synthase related protein, C-terminal domain HKJ33_10075 PF00586 AIR synthase related protein, N-terminal domain HKJ33_10080 PF01029 NusB family HKJ33_10085 PF00885 6,7-dimethyl-8-ribityllumazine synthase HKJ33_10090 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HKJ33_10090 PF00925 GTP cyclohydrolase II HKJ33_10095 PF00677 Lumazine binding domain HKJ33_10105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HKJ33_10105 PF01872 RibD C-terminal domain HKJ33_10110 PF03477 ATP cone domain HKJ33_10120 PF00464 Serine hydroxymethyltransferase HKJ33_10125 PF00005 ABC transporter HKJ33_10125 PF12848 ABC transporter HKJ33_10130 PF06039 Malate:quinone oxidoreductase (Mqo) HKJ33_10135 PF04134 Protein of unknown function, DUF393 HKJ33_10145 PF01479 S4 domain HKJ33_10145 PF00849 RNA pseudouridylate synthase HKJ33_10150 PF13525 Outer membrane lipoprotein HKJ33_10160 PF07664 Ferrous iron transport protein B C terminus HKJ33_10160 PF02421 Ferrous iron transport protein B HKJ33_10160 PF07670 Nucleoside recognition HKJ33_10170 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HKJ33_10175 PF01189 16S rRNA methyltransferase RsmB/F HKJ33_10175 PF01029 NusB family HKJ33_10180 PF02911 Formyl transferase, C-terminal domain HKJ33_10180 PF00551 Formyl transferase HKJ33_10185 PF01327 Polypeptide deformylase HKJ33_10195 PF17782 DprA winged helix domain HKJ33_10195 PF02481 DNA recombination-mediator protein A HKJ33_10200 PF04361 Protein of unknown function (DUF494) HKJ33_10205 PF13368 Topoisomerase C-terminal repeat HKJ33_10205 PF01751 Toprim domain HKJ33_10205 PF01131 DNA topoisomerase HKJ33_10210 PF01300 Telomere recombination HKJ33_10240 PF04386 Stringent starvation protein B HKJ33_10245 PF00043 Glutathione S-transferase, C-terminal domain HKJ33_10245 PF02798 Glutathione S-transferase, N-terminal domain HKJ33_10250 PF02167 Cytochrome C1 family HKJ33_10255 PF00032 Cytochrome b(C-terminal)/b6/petD HKJ33_10255 PF00033 Cytochrome b/b6/petB HKJ33_10260 PF00355 Rieske [2Fe-2S] domain HKJ33_10260 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HKJ33_10265 PF01464 Transglycosylase SLT domain HKJ33_10270 PF00919 Uncharacterized protein family UPF0004 HKJ33_10270 PF01938 TRAM domain HKJ33_10270 PF04055 Radical SAM superfamily HKJ33_10275 PF02562 PhoH-like protein HKJ33_10280 PF02130 Uncharacterized protein family UPF0054 HKJ33_10290 PF03471 Transporter associated domain HKJ33_10290 PF00571 CBS domain HKJ33_10300 PF01544 CorA-like Mg2+ transporter protein HKJ33_10375 PF14814 Bifunctional transglycosylase second domain HKJ33_10375 PF00905 Penicillin binding protein transpeptidase domain HKJ33_10375 PF00912 Transglycosylase HKJ33_10385 PF04851 Type III restriction enzyme, res subunit HKJ33_10385 PF13307 Helicase C-terminal domain HKJ33_10400 PF00484 Carbonic anhydrase HKJ33_10410 PF01522 Polysaccharide deacetylase HKJ33_10420 PF00005 ABC transporter HKJ33_10420 PF09383 NIL domain HKJ33_10425 PF00528 Binding-protein-dependent transport system inner membrane component HKJ33_10430 PF03180 NLPA lipoprotein HKJ33_10445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HKJ33_10445 PF02817 e3 binding domain HKJ33_10445 PF00364 Biotin-requiring enzyme HKJ33_10450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HKJ33_10450 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKJ33_10460 PF01545 Cation efflux family HKJ33_10465 PF01053 Cys/Met metabolism PLP-dependent enzyme HKJ33_10470 PF00561 alpha/beta hydrolase fold HKJ33_10475 PF01551 Peptidase family M23 HKJ33_10485 PF01975 Survival protein SurE HKJ33_10495 PF09335 SNARE associated Golgi protein HKJ33_10500 PF01476 LysM domain HKJ33_10500 PF01551 Peptidase family M23 HKJ33_10510 PF00989 PAS fold HKJ33_10510 PF00512 His Kinase A (phospho-acceptor) domain HKJ33_10510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_10510 PF16736 Single Cache-like HKJ33_10515 PF00842 Alanine racemase, C-terminal domain HKJ33_10515 PF01168 Alanine racemase, N-terminal domain HKJ33_10520 PF01266 FAD dependent oxidoreductase HKJ33_10525 PF01641 SelR domain HKJ33_10530 PF00704 Glycosyl hydrolases family 18 HKJ33_10530 PF01476 LysM domain HKJ33_10535 PF00728 Glycosyl hydrolase family 20, catalytic domain HKJ33_10535 PF02838 Glycosyl hydrolase family 20, domain 2 HKJ33_10535 PF07691 PA14 domain HKJ33_10545 PF07691 PA14 domain HKJ33_10545 PF00933 Glycosyl hydrolase family 3 N terminal domain HKJ33_10545 PF01915 Glycosyl hydrolase family 3 C-terminal domain HKJ33_10545 PF14310 Fibronectin type III-like domain HKJ33_10560 PF07971 Glycosyl hydrolase family 92 HKJ33_10560 PF17678 Glycosyl hydrolase family 92 N-terminal domain HKJ33_10565 PF01301 Glycosyl hydrolases family 35 HKJ33_10570 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HKJ33_10575 PF09312 SurA N-terminal domain HKJ33_10575 PF00639 PPIC-type PPIASE domain HKJ33_10580 PF03968 OstA-like protein HKJ33_10580 PF04453 LPS transport system D HKJ33_10585 PF01494 FAD binding domain HKJ33_10590 PF01494 FAD binding domain HKJ33_10600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HKJ33_10600 PF03466 LysR substrate binding domain HKJ33_10605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HKJ33_10605 PF14824 Sirohaem biosynthesis protein central HKJ33_10605 PF10414 Sirohaem synthase dimerisation region HKJ33_10610 PF00291 Pyridoxal-phosphate dependent enzyme HKJ33_10635 PF00274 Fructose-bisphosphate aldolase class-I HKJ33_10640 PF00224 Pyruvate kinase, barrel domain HKJ33_10640 PF02887 Pyruvate kinase, alpha/beta domain HKJ33_10650 PF00162 Phosphoglycerate kinase HKJ33_10655 PF00749 tRNA synthetases class I (E and Q), catalytic domain HKJ33_10660 PF01475 Ferric uptake regulator family HKJ33_10670 PF00553 Cellulose binding domain HKJ33_10670 PF00150 Cellulase (glycosyl hydrolase family 5) HKJ33_10680 PF00675 Insulinase (Peptidase family M16) HKJ33_10680 PF05193 Peptidase M16 inactive domain HKJ33_10700 PF03330 Lytic transglycolase HKJ33_10705 PF07517 SecA DEAD-like domain HKJ33_10705 PF02810 SEC-C motif HKJ33_10705 PF07516 SecA Wing and Scaffold domain HKJ33_10705 PF01043 SecA preprotein cross-linking domain HKJ33_10710 PF08525 Opacity-associated protein A N-terminal motif HKJ33_10710 PF01476 LysM domain HKJ33_10710 PF01551 Peptidase family M23 HKJ33_10720 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HKJ33_10725 PF12327 FtsZ family, C-terminal domain HKJ33_10725 PF00091 Tubulin/FtsZ family, GTPase domain HKJ33_10730 PF02491 SHS2 domain inserted in FTSA HKJ33_10735 PF08478 POTRA domain, FtsQ-type HKJ33_10735 PF03799 Cell division protein FtsQ HKJ33_10740 PF07478 D-ala D-ala ligase C-terminus HKJ33_10740 PF01820 D-ala D-ala ligase N-terminus HKJ33_10745 PF08245 Mur ligase middle domain HKJ33_10745 PF01225 Mur ligase family, catalytic domain HKJ33_10745 PF02875 Mur ligase family, glutamate ligase domain HKJ33_10750 PF04101 Glycosyltransferase family 28 C-terminal domain HKJ33_10750 PF03033 Glycosyltransferase family 28 N-terminal domain HKJ33_10755 PF01098 Cell cycle protein HKJ33_10760 PF00953 Glycosyl transferase family 4 HKJ33_10765 PF08245 Mur ligase middle domain HKJ33_10765 PF02875 Mur ligase family, glutamate ligase domain HKJ33_10765 PF01225 Mur ligase family, catalytic domain HKJ33_10770 PF02875 Mur ligase family, glutamate ligase domain HKJ33_10770 PF08245 Mur ligase middle domain HKJ33_10770 PF01225 Mur ligase family, catalytic domain HKJ33_10775 PF03717 Penicillin-binding Protein dimerisation domain HKJ33_10775 PF00905 Penicillin binding protein transpeptidase domain HKJ33_10780 PF04999 Cell division protein FtsL HKJ33_10785 PF01795 MraW methylase family HKJ33_10790 PF02381 MraZ protein, putative antitoxin-like HKJ33_10800 PF02080 TrkA-C domain HKJ33_10800 PF03600 Citrate transporter HKJ33_10805 PF02390 Putative methyltransferase HKJ33_10810 PF05690 Thiazole biosynthesis protein ThiG HKJ33_10815 PF05690 Thiazole biosynthesis protein ThiG HKJ33_10815 PF02597 ThiS family HKJ33_10855 PF07977 FabA-like domain HKJ33_10890 PF04143 Sulphur transport HKJ33_10900 PF01925 Sulfite exporter TauE/SafE HKJ33_10905 PF00692 dUTPase HKJ33_10915 PF08676 MutL C terminal dimerisation domain HKJ33_10915 PF01119 DNA mismatch repair protein, C-terminal domain HKJ33_10920 PF11741 AMIN domain HKJ33_10920 PF01520 N-acetylmuramoyl-L-alanine amidase HKJ33_10925 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HKJ33_10930 PF01256 Carbohydrate kinase HKJ33_10930 PF03853 YjeF-related protein N-terminus HKJ33_10935 PF13742 OB-fold nucleic acid binding domain HKJ33_10935 PF02601 Exonuclease VII, large subunit HKJ33_10950 PF01612 3'-5' exonuclease HKJ33_10950 PF00570 HRDC domain HKJ33_10960 PF01728 FtsJ-like methyltransferase HKJ33_10960 PF18125 RlmM ferredoxin-like domain HKJ33_10980 PF00216 Bacterial DNA-binding protein HKJ33_10985 PF03484 tRNA synthetase B5 domain HKJ33_10985 PF03147 Ferredoxin-fold anticodon binding domain HKJ33_10985 PF01588 Putative tRNA binding domain HKJ33_10985 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HKJ33_10985 PF03483 B3/4 domain HKJ33_10990 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HKJ33_10990 PF01409 tRNA synthetases class II core domain (F) HKJ33_10995 PF00453 Ribosomal protein L20 HKJ33_11000 PF01632 Ribosomal protein L35 HKJ33_11005 PF05198 Translation initiation factor IF-3, N-terminal domain HKJ33_11005 PF00707 Translation initiation factor IF-3, C-terminal domain HKJ33_11010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HKJ33_11010 PF03129 Anticodon binding domain HKJ33_11010 PF02824 TGS domain HKJ33_11010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HKJ33_11025 PF01381 Helix-turn-helix HKJ33_11075 PF05973 Phage derived protein Gp49-like (DUF891) HKJ33_11080 PF01381 Helix-turn-helix HKJ33_11090 PF10876 Phage tail assemb.y chaperone protein, TAC HKJ33_11145 PF04233 Phage Mu protein F like protein HKJ33_11150 PF06381 Protein of unknown function (DUF1073) HKJ33_11180 PF00959 Phage lysozyme HKJ33_11210 PF10548 P22AR C-terminal domain HKJ33_11210 PF02498 BRO family, N-terminal domain HKJ33_11215 PF10548 P22AR C-terminal domain HKJ33_11215 PF02498 BRO family, N-terminal domain HKJ33_11320 PF10065 Uncharacterized conserved protein (DUF2303) HKJ33_11340 PF00436 Single-strand binding protein family HKJ33_11350 PF02899 Phage integrase, N-terminal SAM-like domain HKJ33_11350 PF00589 Phage integrase family HKJ33_11360 PF18030 RimK PreATP-grasp domain HKJ33_11360 PF08443 RimK-like ATP-grasp domain HKJ33_11365 PF00072 Response regulator receiver domain HKJ33_11365 PF00486 Transcriptional regulatory protein, C terminal HKJ33_11370 PF00512 His Kinase A (phospho-acceptor) domain HKJ33_11370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_11370 PF00672 HAMP domain HKJ33_11375 PF01121 Dephospho-CoA kinase HKJ33_11380 PF01478 Type IV leader peptidase family HKJ33_11380 PF06750 Bacterial Peptidase A24 N-terminal domain HKJ33_11385 PF00482 Type II secretion system (T2SS), protein F HKJ33_11390 PF07963 Prokaryotic N-terminal methylation motif HKJ33_11390 PF00114 Pilin (bacterial filament) HKJ33_11400 PF07963 Prokaryotic N-terminal methylation motif HKJ33_11400 PF00114 Pilin (bacterial filament) HKJ33_11405 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HKJ33_11405 PF00437 Type II/IV secretion system protein HKJ33_11410 PF00072 Response regulator receiver domain HKJ33_11410 PF02954 Bacterial regulatory protein, Fis family HKJ33_11410 PF00158 Sigma-54 interaction domain HKJ33_11415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_11415 PF00512 His Kinase A (phospho-acceptor) domain HKJ33_11420 PF00549 CoA-ligase HKJ33_11420 PF08442 ATP-grasp domain HKJ33_11425 PF02629 CoA binding domain HKJ33_11425 PF00549 CoA-ligase HKJ33_11435 PF17287 POTRA domain HKJ33_11435 PF08479 POTRA domain, ShlB-type HKJ33_11435 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HKJ33_11445 PF03989 DNA gyrase C-terminal domain, beta-propeller HKJ33_11445 PF00521 DNA gyrase/topoisomerase IV, subunit A HKJ33_11450 PF01008 Initiation factor 2 subunit family HKJ33_11460 PF00152 tRNA synthetases class II (D, K and N) HKJ33_11470 PF00533 BRCA1 C Terminus (BRCT) domain HKJ33_11470 PF01653 NAD-dependent DNA ligase adenylation domain HKJ33_11470 PF03120 NAD-dependent DNA ligase OB-fold domain HKJ33_11470 PF12826 Helix-hairpin-helix motif HKJ33_11470 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HKJ33_11475 PF04354 ZipA, C-terminal FtsZ-binding domain HKJ33_11480 PF02463 RecF/RecN/SMC N terminal domain HKJ33_11485 PF03948 Ribosomal protein L9, C-terminal domain HKJ33_11485 PF01281 Ribosomal protein L9, N-terminal domain HKJ33_11490 PF01084 Ribosomal protein S18 HKJ33_11495 PF01250 Ribosomal protein S6 HKJ33_11500 PF01521 Iron-sulphur cluster biosynthesis HKJ33_11505 PF01336 OB-fold nucleic acid binding domain HKJ33_11505 PF00152 tRNA synthetases class II (D, K and N) HKJ33_11510 PF01061 ABC-2 type transporter HKJ33_11515 PF00005 ABC transporter HKJ33_11525 PF01180 Dihydroorotate dehydrogenase HKJ33_11530 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HKJ33_11530 PF01565 FAD binding domain HKJ33_11535 PF00892 EamA-like transporter family HKJ33_11540 PF01569 PAP2 superfamily HKJ33_11545 PF04551 GcpE protein HKJ33_11555 PF00072 Response regulator receiver domain HKJ33_11560 PF00889 Elongation factor TS HKJ33_11565 PF00318 Ribosomal protein S2 HKJ33_11575 PF00005 ABC transporter HKJ33_11575 PF00664 ABC transporter transmembrane region HKJ33_11590 PF02321 Outer membrane efflux protein HKJ33_11595 PF00149 Calcineurin-like phosphoesterase HKJ33_11605 PF02541 Ppx/GppA phosphatase family HKJ33_11610 PF02503 Polyphosphate kinase middle domain HKJ33_11610 PF13089 Polyphosphate kinase N-terminal domain HKJ33_11610 PF17941 Polyphosphate kinase C-terminal domain 1 HKJ33_11610 PF13090 Polyphosphate kinase C-terminal domain 2 HKJ33_11615 PF11808 Phosphate regulon sensor protein PhoR HKJ33_11615 PF00512 His Kinase A (phospho-acceptor) domain HKJ33_11615 PF00989 PAS fold HKJ33_11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HKJ33_11620 PF00486 Transcriptional regulatory protein, C terminal HKJ33_11620 PF00072 Response regulator receiver domain HKJ33_11625 PF01435 Peptidase family M48 HKJ33_11625 PF13181 Tetratricopeptide repeat HKJ33_11630 PF00462 Glutaredoxin HKJ33_11635 PF18324 Hypothetical protein TT1725 HKJ33_11635 PF00180 Isocitrate/isopropylmalate dehydrogenase HKJ33_11645 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HKJ33_11645 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HKJ33_11650 PF11893 Domain of unknown function (DUF3413) HKJ33_11650 PF00884 Sulfatase HKJ33_11655 PF11953 Domain of unknown function (DUF3470) HKJ33_11655 PF00037 4Fe-4S binding domain HKJ33_11665 PF01106 NifU-like domain HKJ33_11670 PF01329 Pterin 4 alpha carbinolamine dehydratase HKJ33_11680 PF00849 RNA pseudouridylate synthase HKJ33_11680 PF01479 S4 domain HKJ33_11685 PF10150 Ribonuclease E/G family HKJ33_11685 PF12111 Polyribonucleotide phosphorylase C terminal HKJ33_11685 PF00575 S1 RNA binding domain HKJ33_11705 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HKJ33_11705 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HKJ33_11710 PF00545 ribonuclease HKJ33_11725 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HKJ33_11730 PF00313 'Cold-shock' DNA-binding domain HKJ33_11735 PF01590 GAF domain HKJ33_11735 PF00563 EAL domain HKJ33_11735 PF00360 Phytochrome region HKJ33_11735 PF00990 Diguanylate cyclase, GGDEF domain HKJ33_11740 PF01435 Peptidase family M48 HKJ33_11745 PF00009 Elongation factor Tu GTP binding domain HKJ33_11745 PF03144 Elongation factor Tu domain 2 HKJ33_11745 PF03143 Elongation factor Tu C-terminal domain HKJ33_11750 PF00679 Elongation factor G C-terminus HKJ33_11750 PF14492 Elongation Factor G, domain II HKJ33_11750 PF03764 Elongation factor G, domain IV HKJ33_11750 PF00009 Elongation factor Tu GTP binding domain HKJ33_11750 PF03144 Elongation factor Tu domain 2 HKJ33_11755 PF00177 Ribosomal protein S7p/S5e HKJ33_11760 PF00164 Ribosomal protein S12/S23 HKJ33_11765 PF04998 RNA polymerase Rpb1, domain 5 HKJ33_11765 PF05000 RNA polymerase Rpb1, domain 4 HKJ33_11765 PF04983 RNA polymerase Rpb1, domain 3 HKJ33_11765 PF00623 RNA polymerase Rpb1, domain 2 HKJ33_11765 PF04997 RNA polymerase Rpb1, domain 1 HKJ33_11770 PF00562 RNA polymerase Rpb2, domain 6 HKJ33_11770 PF04560 RNA polymerase Rpb2, domain 7 HKJ33_11770 PF04565 RNA polymerase Rpb2, domain 3 HKJ33_11770 PF10385 RNA polymerase beta subunit external 1 domain HKJ33_11770 PF04563 RNA polymerase beta subunit HKJ33_11770 PF04561 RNA polymerase Rpb2, domain 2 HKJ33_11775 PF00542 Ribosomal protein L7/L12 C-terminal domain HKJ33_11775 PF16320 Ribosomal protein L7/L12 dimerisation domain HKJ33_11780 PF00466 Ribosomal protein L10 HKJ33_11785 PF00687 Ribosomal protein L1p/L10e family HKJ33_11790 PF00298 Ribosomal protein L11, RNA binding domain HKJ33_11790 PF03946 Ribosomal protein L11, N-terminal domain HKJ33_11795 PF02357 Transcription termination factor nusG HKJ33_11795 PF00467 KOW motif HKJ33_11800 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HKJ33_11810 PF03144 Elongation factor Tu domain 2 HKJ33_11810 PF03143 Elongation factor Tu C-terminal domain HKJ33_11810 PF00009 Elongation factor Tu GTP binding domain HKJ33_11830 PF06071 Protein of unknown function (DUF933) HKJ33_11830 PF01926 50S ribosome-binding GTPase HKJ33_11835 PF01195 Peptidyl-tRNA hydrolase HKJ33_11840 PF14693 Ribosomal protein TL5, C-terminal domain HKJ33_11840 PF01386 Ribosomal L25p family HKJ33_11845 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HKJ33_11845 PF14572 Phosphoribosyl synthetase-associated domain HKJ33_11855 PF00288 GHMP kinases N terminal domain HKJ33_11855 PF08544 GHMP kinases C terminal HKJ33_11860 PF03550 Outer membrane lipoprotein LolB HKJ33_11870 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HKJ33_11870 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HKJ33_11870 PF01488 Shikimate / quinate 5-dehydrogenase HKJ33_11875 PF03462 PCRF domain HKJ33_11875 PF00472 RF-1 domain HKJ33_11885 PF02926 THUMP domain HKJ33_11885 PF01170 Putative RNA methylase family UPF0020 HKJ33_11885 PF10672 S-adenosylmethionine-dependent methyltransferase HKJ33_11920 PF01914 MarC family integral membrane protein HKJ33_11925 PF00462 Glutaredoxin HKJ33_11930 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HKJ33_11930 PF02222 ATP-grasp domain HKJ33_11935 PF00731 AIR carboxylase HKJ33_11955 PF07731 Multicopper oxidase HKJ33_11955 PF07732 Multicopper oxidase HKJ33_11965 PF00580 UvrD/REP helicase N-terminal domain HKJ33_11965 PF13361 UvrD-like helicase C-terminal domain HKJ33_11970 PF04349 Periplasmic glucan biosynthesis protein, MdoG HKJ33_11975 PF01343 Peptidase family S49 HKJ33_11980 PF01554 MatE HKJ33_11995 PF00270 DEAD/DEAH box helicase HKJ33_11995 PF00271 Helicase conserved C-terminal domain HKJ33_11995 PF17764 3′ DNA-binding domain (3′BD) HKJ33_11995 PF18074 Primosomal protein N C-terminal domain HKJ33_11995 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HKJ33_12000 PF04545 Sigma-70, region 4 HKJ33_12000 PF04542 Sigma-70 region 2 HKJ33_12005 PF03167 Uracil DNA glycosylase superfamily HKJ33_12010 PF00072 Response regulator receiver domain HKJ33_12010 PF01339 CheB methylesterase HKJ33_12015 PF18075 FtsX extracellular domain HKJ33_12020 PF00005 ABC transporter HKJ33_12025 PF00271 Helicase conserved C-terminal domain HKJ33_12025 PF00270 DEAD/DEAH box helicase HKJ33_12025 PF12300 ATP-dependent RNA helicase RhlB HKJ33_12030 PF00085 Thioredoxin HKJ33_12035 PF07497 Rho termination factor, RNA-binding domain HKJ33_12035 PF07498 Rho termination factor, N-terminal domain HKJ33_12035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HKJ33_12040 PF03971 Monomeric isocitrate dehydrogenase HKJ33_12050 PF13180 PDZ domain HKJ33_12050 PF03572 Peptidase family S41 HKJ33_12055 PF01551 Peptidase family M23 HKJ33_12070 PF00150 Cellulase (glycosyl hydrolase family 5) HKJ33_12075 PF07992 Pyridine nucleotide-disulphide oxidoreductase HKJ33_12075 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HKJ33_12080 PF01493 GXGXG motif HKJ33_12080 PF00310 Glutamine amidotransferases class-II HKJ33_12080 PF04898 Glutamate synthase central domain HKJ33_12080 PF01645 Conserved region in glutamate synthase HKJ33_12085 PF14748 Pyrroline-5-carboxylate reductase dimerisation HKJ33_12085 PF03807 NADP oxidoreductase coenzyme F420-dependent HKJ33_12130 PF18766 SWI2/SNF2 ATPase HKJ33_12130 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HKJ33_12130 PF11867 Domain of unknown function (DUF3387) HKJ33_12140 PF12161 HsdM N-terminal domain HKJ33_12140 PF02384 N-6 DNA Methylase HKJ33_12150 PF12008 Type I restriction and modification enzyme - subunit R C terminal HKJ33_12150 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HKJ33_12150 PF18766 SWI2/SNF2 ATPase HKJ33_12170 PF12161 HsdM N-terminal domain HKJ33_12170 PF02384 N-6 DNA Methylase HKJ33_12175 PF01810 LysE type translocator HKJ33_12190 PF11855 Protein of unknown function (DUF3375) HKJ33_12240 PF02384 N-6 DNA Methylase HKJ33_12315 PF06594 Haemolysin-type calcium binding protein related domain HKJ33_12315 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) HKJ33_12360 PF01850 PIN domain HKJ33_12445 PF10396 GTP-binding protein TrmE N-terminus HKJ33_12445 PF12631 MnmE helical domain HKJ33_12445 PF01926 50S ribosome-binding GTPase HKJ33_12455 PF02096 60Kd inner membrane protein HKJ33_12455 PF14849 YidC periplasmic domain HKJ33_12460 PF00825 Ribonuclease P HKJ33_12465 PF00468 Ribosomal protein L34