B9J09_00005 SM00382 ATPases associated with a variety of cellular activities B9J09_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain B9J09_00010 SM00480 DNA polymerase III beta subunit B9J09_00025 SM00387 Histidine kinase-like ATPases B9J09_00025 SM00433 TopoisomeraseII B9J09_00040 SM00028 Tetratricopeptide repeats B9J09_00145 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family B9J09_00190 SM00487 DEAD-like helicases superfamily B9J09_00190 SM00490 helicase superfamily c-terminal domain B9J09_00190 SM00982 B9J09_00190 B9J09_00190 SM01058 CarD-like/TRCF domain B9J09_00210 SM00878 Biotin carboxylase C-terminal domain B9J09_00245 SM00470 ParB-like nuclease domain B9J09_00255 SM00729 Elongator protein 3, MiaB family, Radical SAM B9J09_00255 SM00876 Biotin and Thiamin Synthesis associated domain B9J09_00305 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain B9J09_00305 SM01232 B9J09_00305 B9J09_00315 SM00382 ATPases associated with a variety of cellular activities B9J09_00315 SM00962 SRP54-type protein, GTPase domain B9J09_00315 SM00963 SRP54-type protein, helical bundle domain B9J09_00390 SM00382 ATPases associated with a variety of cellular activities B9J09_00400 SM01103 B9J09_00400 B9J09_00440 SM00812 Alpha-L-fucosidase B9J09_00495 SM01172 B9J09_00495 B9J09_00500 SM00710 Parallel beta-helix repeats B9J09_00500 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses B9J09_00515 SM00382 ATPases associated with a variety of cellular activities B9J09_00520 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B9J09_00630 SM00836 DALR anticodon binding domain B9J09_00630 SM01016 Arginyl tRNA synthetase N terminal dom B9J09_00675 SM00645 Papain family cysteine protease B9J09_00750 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain B9J09_00750 SM01232 B9J09_00750 B9J09_00765 SM00822 B9J09_00765 B9J09_00850 SM00487 DEAD-like helicases superfamily B9J09_00850 SM00490 helicase superfamily c-terminal domain B9J09_00870 SM00563 Phosphate acyltransferases B9J09_00895 SM00481 DNA polymerase alpha chain like domain B9J09_00905 SM00271 DnaJ molecular chaperone homology domain B9J09_00945 SM00347 helix_turn_helix multiple antibiotic resistance protein B9J09_00980 SM01323 B9J09_00980 B9J09_01045 SM00316 Ribosomal protein S1-like RNA-binding domain B9J09_01045 SM00322 K homology RNA-binding domain B9J09_01065 SM01387 B9J09_01065 B9J09_01070 SM00316 Ribosomal protein S1-like RNA-binding domain B9J09_01070 SM00322 K homology RNA-binding domain B9J09_01125 SM00487 DEAD-like helicases superfamily B9J09_01125 SM00490 helicase superfamily c-terminal domain B9J09_01135 SM00893 Electron transfer flavoprotein domain B9J09_01140 SM00893 Electron transfer flavoprotein domain B9J09_01265 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B9J09_01295 SM00966 SpoVT / AbrB like domain B9J09_01405 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region B9J09_01410 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B9J09_01465 SM00448 cheY-homologous receiver domain B9J09_01465 SM00862 Transcriptional regulatory protein, C terminal B9J09_01470 SM00387 Histidine kinase-like ATPases B9J09_01470 SM00388 His Kinase A (phosphoacceptor) domain B9J09_01560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B9J09_01560 SM00954 Region found in RelA / SpoT proteins B9J09_01570 SM00487 DEAD-like helicases superfamily B9J09_01570 SM00490 helicase superfamily c-terminal domain B9J09_01635 SM00965 Secretin and TonB N terminus short domain B9J09_01665 SM00382 ATPases associated with a variety of cellular activities B9J09_01665 SM01086 C-terminal, D2-small domain, of ClpB protein B9J09_01695 SM00448 cheY-homologous receiver domain B9J09_01695 SM00862 Transcriptional regulatory protein, C terminal B9J09_01700 SM00387 Histidine kinase-like ATPases B9J09_01750 SM00387 Histidine kinase-like ATPases B9J09_01765 SM00052 Putative diguanylate phosphodiesterase B9J09_01765 SM00448 cheY-homologous receiver domain B9J09_01805 SM00382 ATPases associated with a variety of cellular activities B9J09_01845 SM00382 ATPases associated with a variety of cellular activities B9J09_01880 SM00400 zinc finger B9J09_01880 SM00493 B9J09_01880 B9J09_01880 SM00766 DNA primase DnaG DnaB-binding B9J09_01905 SM00905 Dihydroneopterin aldolase B9J09_01915 SM01217 B9J09_01915 B9J09_01945 SM00528 Domain in histone-like proteins of HNS family B9J09_01960 SM00448 cheY-homologous receiver domain B9J09_01965 SM00829 Enoylreductase B9J09_01970 SM00244 prohibitin homologues B9J09_01975 SM00244 prohibitin homologues B9J09_01985 SM00788 Adenylosuccinate synthetase B9J09_01990 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B9J09_01995 SM00562 B9J09_01995 B9J09_02005 SM00028 Tetratricopeptide repeats B9J09_02020 SM00564 beta-propeller repeat B9J09_02025 SM00382 ATPases associated with a variety of cellular activities B9J09_02030 SM00450 Rhodanese Homology Domain B9J09_02045 SM00052 Putative diguanylate phosphodiesterase B9J09_02320 SM00382 ATPases associated with a variety of cellular activities B9J09_02360 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. B9J09_02385 SM00116 Domain in cystathionine beta-synthase and other proteins. B9J09_02440 SM00883 Chaperonin 10 Kd subunit B9J09_02520 SM00478 endonuclease III B9J09_02520 SM00525 B9J09_02520 B9J09_02530 SM01160 B9J09_02530 B9J09_02570 SM00977 TilS substrate C-terminal domain B9J09_02615 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B9J09_02620 SM00822 B9J09_02620 B9J09_02630 SM00825 Beta-ketoacyl synthase B9J09_02685 SM00841 Elongation factor P, C-terminal B9J09_02685 SM01185 B9J09_02685 B9J09_02770 SM00382 ATPases associated with a variety of cellular activities B9J09_02790 SM00363 S4 RNA-binding domain B9J09_02870 SM00316 Ribosomal protein S1-like RNA-binding domain B9J09_02875 SM00411 bacterial (prokaryotic) histone like domain B9J09_02885 SM00028 Tetratricopeptide repeats B9J09_02910 SM00116 Domain in cystathionine beta-synthase and other proteins. B9J09_02910 SM01240 B9J09_02910 B9J09_02960 SM00904 Riboflavin kinase B9J09_03070 SM00382 ATPases associated with a variety of cellular activities B9J09_03090 SM00450 Rhodanese Homology Domain B9J09_03115 SM00829 Enoylreductase B9J09_03170 SM01329 B9J09_03170 B9J09_03225 SM00448 cheY-homologous receiver domain B9J09_03235 SM01118 B9J09_03235 B9J09_03255 SM00357 Cold shock protein domain B9J09_03260 SM00869 Autotransporter beta-domain B9J09_03310 SM00271 DnaJ molecular chaperone homology domain B9J09_03325 SM00448 cheY-homologous receiver domain B9J09_03325 SM00862 Transcriptional regulatory protein, C terminal B9J09_03360 SM00382 ATPases associated with a variety of cellular activities B9J09_03380 SM00830 Chorismate mutase type II B9J09_03440 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B9J09_03440 SM00465 GIY-YIG type nucleases (URI domain) B9J09_03470 SM01004 Delta-aminolevulinic acid dehydratase B9J09_03495 SM00226 Low molecular weight phosphatase family B9J09_03505 SM00487 DEAD-like helicases superfamily B9J09_03510 SM01252 B9J09_03510 B9J09_03520 SM00990 B9J09_03520 B9J09_03525 SM00482 DNA polymerase A domain B9J09_03555 SM00849 Metallo-beta-lactamase superfamily B9J09_03565 SM00470 ParB-like nuclease domain B9J09_03580 SM01259 B9J09_03580 B9J09_03655 SM00564 beta-propeller repeat B9J09_03685 SM00861 Transketolase, pyrimidine binding domain B9J09_03700 SM00358 Double-stranded RNA binding motif B9J09_03700 SM00535 Ribonuclease III family B9J09_03715 SM00838 Elongation factor G C-terminus B9J09_03720 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B9J09_03755 SM00271 DnaJ molecular chaperone homology domain B9J09_03770 SM00936 Penicillin-binding protein 5, C-terminal domain B9J09_03785 SM00732 Likely ribonuclease with RNase H fold. B9J09_03870 SM01007 Class II Aldolase and Adducin N-terminal domain B9J09_03895 SM00841 Elongation factor P, C-terminal B9J09_03895 SM01185 B9J09_03895 B9J09_04060 SM00028 Tetratricopeptide repeats B9J09_04065 SM00316 Ribosomal protein S1-like RNA-binding domain B9J09_04065 SM00732 Likely ribonuclease with RNase H fold. B9J09_04080 SM00849 Metallo-beta-lactamase superfamily B9J09_04095 SM00479 B9J09_04095 B9J09_04100 SM00331 Sigma factor PP2C-like phosphatases B9J09_04100 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain B9J09_04145 SM00650 Ribosomal RNA adenine dimethylases B9J09_04150 SM00479 B9J09_04150 B9J09_04160 SM00382 ATPases associated with a variety of cellular activities B9J09_04205 SM00382 ATPases associated with a variety of cellular activities B9J09_04230 SM00530 Helix-turn-helix XRE-family like proteins B9J09_04255 SM00400 zinc finger B9J09_04365 SM01228 B9J09_04365 B9J09_04565 SM00857 Resolvase, N terminal domain B9J09_04580 SM00849 Metallo-beta-lactamase superfamily B9J09_04590 SM00479 B9J09_04590 B9J09_04650 SM01011 Aminopeptidase P, N-terminal domain B9J09_04710 SM00530 Helix-turn-helix XRE-family like proteins B9J09_04750 SM00316 Ribosomal protein S1-like RNA-binding domain B9J09_04750 SM00357 Cold shock protein domain B9J09_04750 SM00955 B9J09_04750 B9J09_04760 SM00967 RNA 2'-O ribose methyltransferase substrate binding B9J09_04795 SM01209 B9J09_04795 B9J09_04795 SM01210 B9J09_04795 B9J09_04800 SM00798 AICARFT/IMPCHase bienzyme B9J09_04800 SM00851 MGS-like domain B9J09_04895 SM00448 cheY-homologous receiver domain B9J09_04900 SM00260 Two component signalling adaptor domain B9J09_04905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B9J09_04910 SM00073 Histidine Phosphotransfer domain B9J09_04910 SM00260 Two component signalling adaptor domain B9J09_04910 SM00387 Histidine kinase-like ATPases B9J09_04910 SM00448 cheY-homologous receiver domain B9J09_04910 SM01231 B9J09_04910 B9J09_04955 SM00411 bacterial (prokaryotic) histone like domain B9J09_04985 SM00861 Transketolase, pyrimidine binding domain B9J09_05120 SM00507 HNH nucleases B9J09_05130 SM00382 ATPases associated with a variety of cellular activities B9J09_05130 SM00962 SRP54-type protein, GTPase domain B9J09_05130 SM00963 SRP54-type protein, helical bundle domain B9J09_05135 SM00478 endonuclease III B9J09_05135 SM00525 B9J09_05135 B9J09_05160 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B9J09_05170 SM00382 ATPases associated with a variety of cellular activities B9J09_05215 SM00855 Phosphoglycerate mutase family B9J09_05250 SM00855 Phosphoglycerate mutase family B9J09_05680 SM00245 tail specific protease B9J09_05695 SM00869 Autotransporter beta-domain B9J09_05810 SM00885 D5 N terminal like B9J09_05815 SM01040 BRO family, N-terminal domain B9J09_05850 SM00530 Helix-turn-helix XRE-family like proteins B9J09_05915 SM01040 BRO family, N-terminal domain B9J09_05920 SM00482 DNA polymerase A domain B9J09_05925 SM00990 B9J09_05925 B9J09_05935 SM00487 DEAD-like helicases superfamily B9J09_05950 SM00387 Histidine kinase-like ATPases B9J09_05950 SM00388 His Kinase A (phosphoacceptor) domain B9J09_05955 SM00382 ATPases associated with a variety of cellular activities B9J09_05955 SM00448 cheY-homologous receiver domain B9J09_05970 SM00938 Nitrogen regulatory protein P-II B9J09_05975 SM01230 B9J09_05975 B9J09_05985 SM00867 YceI-like domain B9J09_06030 SM00833 Cobalamin synthesis protein cobW C-terminal domain B9J09_06055 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B9J09_06055 SM00245 tail specific protease B9J09_06080 SM00917 LeuA allosteric (dimerisation) domain B9J09_06115 SM00460 Transglutaminase/protease-like homologues B9J09_06130 SM00493 B9J09_06130 B9J09_06140 SM00382 ATPases associated with a variety of cellular activities B9J09_06175 SM00450 Rhodanese Homology Domain B9J09_06245 SM00533 DNA-binding domain of DNA mismatch repair MUTS family B9J09_06245 SM00534 ATPase domain of DNA mismatch repair MUTS family B9J09_06505 SM01040 BRO family, N-terminal domain B9J09_06510 SM01040 BRO family, N-terminal domain B9J09_06545 SM00530 Helix-turn-helix XRE-family like proteins B9J09_06625 SM01040 BRO family, N-terminal domain B9J09_06650 SM00248 ankyrin repeats B9J09_06660 SM00825 Beta-ketoacyl synthase B9J09_06690 SM00382 ATPases associated with a variety of cellular activities B9J09_06720 SM00448 cheY-homologous receiver domain B9J09_06720 SM00850 LytTr DNA-binding domain B9J09_06750 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B9J09_06795 SM00984 UDP binding domain B9J09_06815 SM00382 ATPases associated with a variety of cellular activities B9J09_06865 SM00530 Helix-turn-helix XRE-family like proteins B9J09_07105 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. B9J09_07110 SM00861 Transketolase, pyrimidine binding domain B9J09_07145 SM00100 Cyclic nucleotide-monophosphate binding domain B9J09_07145 SM00419 helix_turn_helix, cAMP Regulatory protein B9J09_07260 SM00382 ATPases associated with a variety of cellular activities B9J09_07305 SM00729 Elongator protein 3, MiaB family, Radical SAM B9J09_07325 SM00072 Guanylate kinase homologues. B9J09_07330 SM01409 B9J09_07330 B9J09_07370 SM00028 Tetratricopeptide repeats B9J09_07375 SM00528 Domain in histone-like proteins of HNS family B9J09_07380 SM00347 helix_turn_helix multiple antibiotic resistance protein B9J09_07390 SM01263 B9J09_07390 B9J09_07405 SM00382 ATPases associated with a variety of cellular activities B9J09_07405 SM01086 C-terminal, D2-small domain, of ClpB protein B9J09_07440 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain B9J09_07455 SM00382 ATPases associated with a variety of cellular activities B9J09_07510 SM00354 helix_turn _helix lactose operon repressor B9J09_07550 SM00387 Histidine kinase-like ATPases B9J09_07550 SM00388 His Kinase A (phosphoacceptor) domain B9J09_07550 SM00448 cheY-homologous receiver domain B9J09_07560 SM00382 ATPases associated with a variety of cellular activities B9J09_07575 SM00382 ATPases associated with a variety of cellular activities B9J09_07575 SM00843 B9J09_07575 B9J09_07595 SM00316 Ribosomal protein S1-like RNA-binding domain B9J09_07605 SM00382 ATPases associated with a variety of cellular activities B9J09_07605 SM01086 C-terminal, D2-small domain, of ClpB protein B9J09_07685 SM01211 B9J09_07685 B9J09_07730 SM00116 Domain in cystathionine beta-synthase and other proteins. B9J09_07750 SM00382 ATPases associated with a variety of cellular activities B9J09_07855 SM00382 ATPases associated with a variety of cellular activities B9J09_07855 SM00487 DEAD-like helicases superfamily B9J09_07855 SM00490 helicase superfamily c-terminal domain B9J09_07855 SM00847 Helicase associated domain (HA2) Add an annotation B9J09_07865 SM00341 Helicase and RNase D C-terminal B9J09_07865 SM00487 DEAD-like helicases superfamily B9J09_07865 SM00490 helicase superfamily c-terminal domain B9J09_07865 SM00956 B9J09_07865 B9J09_07880 SM00382 ATPases associated with a variety of cellular activities B9J09_07910 SM00859 Semialdehyde dehydrogenase, NAD binding domain B9J09_07955 SM00849 Metallo-beta-lactamase superfamily B9J09_07985 SM00347 helix_turn_helix multiple antibiotic resistance protein B9J09_07990 SM00434 DNA Topoisomerase IV B9J09_08005 SM00382 ATPases associated with a variety of cellular activities B9J09_08080 SM00387 Histidine kinase-like ATPases B9J09_08080 SM00388 His Kinase A (phosphoacceptor) domain B9J09_08080 SM00448 cheY-homologous receiver domain B9J09_08085 SM00867 YceI-like domain B9J09_08095 SM00867 YceI-like domain B9J09_08100 SM00478 endonuclease III B9J09_08145 SM00954 Region found in RelA / SpoT proteins B9J09_08175 SM00268 Actin B9J09_08225 SM00382 ATPases associated with a variety of cellular activities B9J09_08255 SM00463 Small MutS-related domain B9J09_08275 SM01192 B9J09_08275 B9J09_08275 SM01193 B9J09_08275 B9J09_08295 SM00387 Histidine kinase-like ATPases B9J09_08295 SM00433 TopoisomeraseII B9J09_08310 SM00116 Domain in cystathionine beta-synthase and other proteins. B9J09_08310 SM01091 Transporter associated domain B9J09_08345 SM00729 Elongator protein 3, MiaB family, Radical SAM B9J09_08385 SM00479 B9J09_08385 B9J09_08395 SM00342 helix_turn_helix, arabinose operon control protein B9J09_08405 SM01359 B9J09_08405 B9J09_08405 SM01360 B9J09_08405 B9J09_08585 SM00487 DEAD-like helicases superfamily B9J09_08585 SM00490 helicase superfamily c-terminal domain B9J09_08585 SM00847 Helicase associated domain (HA2) Add an annotation B9J09_08610 SM00382 ATPases associated with a variety of cellular activities B9J09_08620 SM00382 ATPases associated with a variety of cellular activities B9J09_08655 SM00838 Elongation factor G C-terminus B9J09_08675 SM00155 Phospholipase D. Active site motifs. B9J09_08770 SM00411 bacterial (prokaryotic) histone like domain B9J09_08775 SM00382 ATPases associated with a variety of cellular activities B9J09_08775 SM00464 Found in ATP-dependent protease La (LON) B9J09_08780 SM00382 ATPases associated with a variety of cellular activities B9J09_08780 SM00994 ClpX C4-type zinc finger B9J09_08780 SM01086 C-terminal, D2-small domain, of ClpB protein B9J09_08805 SM00984 UDP binding domain B9J09_08825 SM00382 ATPases associated with a variety of cellular activities B9J09_08840 SM00662 RNA polymerases D B9J09_08845 SM00363 S4 RNA-binding domain B9J09_08845 SM01390 B9J09_08845 B9J09_08905 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. B9J09_08910 SM01374 B9J09_08910 B9J09_08930 SM00322 K homology RNA-binding domain B9J09_08945 SM01382 B9J09_08945 B9J09_08945 SM01383 B9J09_08945 B9J09_08965 SM01403 B9J09_08965 B9J09_09005 SM00382 ATPases associated with a variety of cellular activities B9J09_09015 SM00830 Chorismate mutase type II B9J09_09075 SM00316 Ribosomal protein S1-like RNA-binding domain B9J09_09125 SM00387 Histidine kinase-like ATPases B9J09_09125 SM00388 His Kinase A (phosphoacceptor) domain B9J09_09125 SM00448 cheY-homologous receiver domain B9J09_09130 SM00448 cheY-homologous receiver domain B9J09_09130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B9J09_09140 SM00937 B9J09_09140 B9J09_09160 SM00851 MGS-like domain B9J09_09160 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B9J09_09165 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain B9J09_09180 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs B9J09_09180 SM00474 3'-5' exonuclease B9J09_09180 SM00475 5'-3' exonuclease B9J09_09180 SM00482 DNA polymerase A domain B9J09_09220 SM00530 Helix-turn-helix XRE-family like proteins B9J09_09225 SM00155 Phospholipase D. Active site motifs. B9J09_09230 SM00867 YceI-like domain B9J09_09235 SM00855 Phosphoglycerate mutase family B9J09_09250 SM00382 ATPases associated with a variety of cellular activities B9J09_09265 SM00849 Metallo-beta-lactamase superfamily B9J09_09270 SM00382 ATPases associated with a variety of cellular activities B9J09_09320 SM00382 ATPases associated with a variety of cellular activities B9J09_09420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B9J09_09460 SM00996 S-adenosyl-L-homocysteine hydrolase B9J09_09460 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain B9J09_09480 SM00563 Phosphate acyltransferases B9J09_09485 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain B9J09_09500 SM00869 Autotransporter beta-domain B9J09_09535 SM00529 Helix-turn-helix diphteria tox regulatory element B9J09_09580 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase B9J09_09590 SM00859 Semialdehyde dehydrogenase, NAD binding domain B9J09_09625 SM00840 B9J09_09625 B9J09_09650 SM01234 B9J09_09650 B9J09_09665 SM00267 diguanylate cyclase B9J09_09700 SM00387 Histidine kinase-like ATPases B9J09_09705 SM00919 Malic enzyme, NAD binding domain B9J09_09705 SM01274 B9J09_09705 B9J09_09730 SM00421 helix_turn_helix, Lux Regulon B9J09_09730 SM00448 cheY-homologous receiver domain B9J09_09760 SM00487 DEAD-like helicases superfamily B9J09_09760 SM00490 helicase superfamily c-terminal domain B9J09_09775 SM01130 B9J09_09775 B9J09_09860 SM00382 ATPases associated with a variety of cellular activities B9J09_09880 SM00363 S4 RNA-binding domain B9J09_09900 SM00899 B9J09_09900 B9J09_09925 SM00257 Lysin motif B9J09_09945 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain B9J09_09945 SM00437 Bacterial DNA topoisomerase I DNA-binding domain B9J09_09945 SM00493 B9J09_09945 B9J09_09970 SM00530 Helix-turn-helix XRE-family like proteins B9J09_10010 SM00729 Elongator protein 3, MiaB family, Radical SAM B9J09_10030 SM00116 Domain in cystathionine beta-synthase and other proteins. B9J09_10030 SM01091 Transporter associated domain B9J09_10105 SM00491 B9J09_10105 B9J09_10115 SM00947 Carbonic anhydrase B9J09_10140 SM00382 ATPases associated with a variety of cellular activities B9J09_10140 SM00930 B9J09_10140 B9J09_10225 SM00257 Lysin motif B9J09_10235 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B9J09_10235 SM00091 PAS domain B9J09_10235 SM00387 Histidine kinase-like ATPases B9J09_10235 SM00388 His Kinase A (phosphoacceptor) domain B9J09_10245 SM01005 Alanine racemase, C-terminal domain B9J09_10260 SM00636 B9J09_10260 B9J09_10275 SM00758 B9J09_10275 B9J09_10275 SM01217 B9J09_10275 B9J09_10285 SM01149 B9J09_10285 B9J09_10405 SM00637 B9J09_10405 B9J09_10435 SM00957 SecA DEAD-like domain B9J09_10435 SM00958 SecA preprotein cross-linking domain B9J09_10460 SM00864 Tubulin/FtsZ family, GTPase domain B9J09_10460 SM00865 Tubulin/FtsZ family, C-terminal domain B9J09_10465 SM00842 Cell division protein FtsA B9J09_10560 SM00869 Autotransporter beta-domain B9J09_10640 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B9J09_10670 SM00853 MutL C terminal dimerisation domain B9J09_10670 SM01340 B9J09_10670 B9J09_10675 SM00646 B9J09_10675 B9J09_10710 SM00474 3'-5' exonuclease B9J09_10715 SM00528 Domain in histone-like proteins of HNS family B9J09_10735 SM00422 helix_turn_helix, mercury resistance B9J09_10740 SM00411 bacterial (prokaryotic) histone like domain B9J09_10745 SM00873 B3/4 domain B9J09_10745 SM00874 tRNA synthetase B5 domain B9J09_10745 SM00896 Ferredoxin-fold anticodon binding domain B9J09_10770 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B9J09_10795 SM00448 cheY-homologous receiver domain B9J09_10795 SM00862 Transcriptional regulatory protein, C terminal B9J09_10800 SM00387 Histidine kinase-like ATPases B9J09_10800 SM00388 His Kinase A (phosphoacceptor) domain B9J09_10845 SM00382 ATPases associated with a variety of cellular activities B9J09_10845 SM00448 cheY-homologous receiver domain B9J09_10850 SM00387 Histidine kinase-like ATPases B9J09_10850 SM00388 His Kinase A (phosphoacceptor) domain B9J09_10860 SM00881 CoA binding domain B9J09_10880 SM00434 DNA Topoisomerase IV B9J09_10905 SM00292 breast cancer carboxy-terminal domain B9J09_10905 SM00532 Ligase N family B9J09_10915 SM00771 ZipA, C-terminal domain (FtsZ-binding) B9J09_10920 SM00968 SMC proteins Flexible Hinge Domain B9J09_10960 SM00382 ATPases associated with a variety of cellular activities B9J09_11000 SM00387 Histidine kinase-like ATPases B9J09_11005 SM00448 cheY-homologous receiver domain B9J09_11025 SM00382 ATPases associated with a variety of cellular activities B9J09_11065 SM00387 Histidine kinase-like ATPases B9J09_11065 SM00388 His Kinase A (phosphoacceptor) domain B9J09_11070 SM00448 cheY-homologous receiver domain B9J09_11070 SM00862 Transcriptional regulatory protein, C terminal B9J09_11085 SM01329 B9J09_11085 B9J09_11130 SM00363 S4 RNA-binding domain B9J09_11135 SM00316 Ribosomal protein S1-like RNA-binding domain B9J09_11140 SM00421 helix_turn_helix, Lux Regulon B9J09_11140 SM00448 cheY-homologous receiver domain B9J09_11145 SM00450 Rhodanese Homology Domain B9J09_11150 SM00448 cheY-homologous receiver domain B9J09_11175 SM00382 ATPases associated with a variety of cellular activities B9J09_11190 SM00357 Cold shock protein domain B9J09_11195 SM00052 Putative diguanylate phosphodiesterase B9J09_11195 SM00091 PAS domain B9J09_11195 SM00267 diguanylate cyclase B9J09_11215 SM00838 Elongation factor G C-terminus B9J09_11215 SM00889 Elongation factor G, domain IV B9J09_11230 SM00663 RNA polymerase I subunit A N-terminus B9J09_11255 SM00649 Ribosomal protein L11/L12 B9J09_11260 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. B9J09_11260 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. B9J09_11310 SM01400 B9J09_11310 B9J09_11330 SM00028 Tetratricopeptide repeats B9J09_11340 SM00937 B9J09_11340 B9J09_11350 SM00981 B9J09_11350 B9J09_11370 SM00644 B9J09_11370 B9J09_11420 SM01001 AIR carboxylase B9J09_11485 SM00487 DEAD-like helicases superfamily B9J09_11485 SM00490 helicase superfamily c-terminal domain B9J09_11495 SM00986 Uracil DNA glycosylase superfamily B9J09_11495 SM00987 UreE urease accessory protein, C-terminal domain B9J09_11500 SM00448 cheY-homologous receiver domain B9J09_11510 SM00382 ATPases associated with a variety of cellular activities B9J09_11515 SM00487 DEAD-like helicases superfamily B9J09_11515 SM00490 helicase superfamily c-terminal domain B9J09_11525 SM00357 Cold shock protein domain B9J09_11525 SM00382 ATPases associated with a variety of cellular activities B9J09_11525 SM00959 Rho termination factor, N-terminal domain B9J09_11540 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B9J09_11540 SM00245 tail specific protease B9J09_11590 SM00812 Alpha-L-fucosidase B9J09_11625 SM00487 DEAD-like helicases superfamily B9J09_11645 SM00487 DEAD-like helicases superfamily B9J09_11710 SM00487 DEAD-like helicases superfamily B9J09_11925 SM00470 ParB-like nuclease domain B9J09_11975 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain B9J09_11975 SM00437 Bacterial DNA topoisomerase I DNA-binding domain B9J09_11975 SM00493 B9J09_11975 B9J09_11985 SM00493 B9J09_11985 B9J09_11990 SM00857 Resolvase, N terminal domain B9J09_12080 SM00382 ATPases associated with a variety of cellular activities B9J09_12085 SM00530 Helix-turn-helix XRE-family like proteins