D934_01245 8779b1ed399f85c690ddd14851ebc954 348 SUPERFAMILY SSF49401 196 348 9.94E-25 T 15-10-2018 IPR008966 Adhesion domain superfamily D934_01245 8779b1ed399f85c690ddd14851ebc954 348 Gene3D G3DSA:2.60.40.3310 36 200 5.8E-33 T 15-10-2018 D934_01245 8779b1ed399f85c690ddd14851ebc954 348 Gene3D G3DSA:2.60.40.1090 201 348 5.4E-29 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 D934_01245 8779b1ed399f85c690ddd14851ebc954 348 Pfam PF00419 Fimbrial protein 188 348 2.9E-16 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 D934_08585 f24277e78cf34a775261b89157c19da8 498 Pfam PF11863 Protein of unknown function (DUF3383) 5 494 4.0E-152 T 15-10-2018 IPR021808 Protein of unknown function DUF3383 D934_06695 f24277e78cf34a775261b89157c19da8 498 Pfam PF11863 Protein of unknown function (DUF3383) 5 494 4.0E-152 T 15-10-2018 IPR021808 Protein of unknown function DUF3383 D934_01140 16c7645717193f6ba40e8c06594d6b06 359 Gene3D G3DSA:1.10.10.730 131 184 1.9E-7 T 15-10-2018 D934_01140 16c7645717193f6ba40e8c06594d6b06 359 SUPERFAMILY SSF110849 46 182 5.06E-25 T 15-10-2018 IPR036086 ParB/Sulfiredoxin superfamily D934_01140 16c7645717193f6ba40e8c06594d6b06 359 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 42 185 1.4E-27 T 15-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 D934_01140 16c7645717193f6ba40e8c06594d6b06 359 Pfam PF08535 KorB domain 164 248 2.7E-5 T 15-10-2018 IPR013741 Repressor KorB domain D934_01140 16c7645717193f6ba40e8c06594d6b06 359 Gene3D G3DSA:3.90.1530.30 57 123 4.6E-10 T 15-10-2018 D934_01140 16c7645717193f6ba40e8c06594d6b06 359 SMART SM00470 43 137 5.1E-19 T 15-10-2018 IPR003115 ParB/Sulfiredoxin D934_01140 16c7645717193f6ba40e8c06594d6b06 359 Pfam PF02195 ParB-like nuclease domain 44 137 5.0E-13 T 15-10-2018 IPR003115 ParB/Sulfiredoxin D934_05310 eff6233d2d2c187cd504b98f373776a4 188 Pfam PF10991 Protein of unknown function (DUF2815) 2 173 9.4E-48 T 15-10-2018 IPR022595 Protein of unknown function DUF2815 D934_05310 eff6233d2d2c187cd504b98f373776a4 188 Gene3D G3DSA:2.40.50.140 1 172 1.8E-48 T 15-10-2018 D934_05310 eff6233d2d2c187cd504b98f373776a4 188 SUPERFAMILY SSF50249 6 169 6.17E-11 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_06785 cb6434976d44046bf5df31a1a2c5d1cd 291 SUPERFAMILY SSF52540 8 226 2.92E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_06785 cb6434976d44046bf5df31a1a2c5d1cd 291 SMART SM00382 34 212 3.5E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_06785 cb6434976d44046bf5df31a1a2c5d1cd 291 Pfam PF00005 ABC transporter 26 162 6.3E-19 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_06785 cb6434976d44046bf5df31a1a2c5d1cd 291 Gene3D G3DSA:3.40.50.300 1 237 2.5E-41 T 15-10-2018 D934_04785 6897724772b429dabe8cf20edf6a9e78 411 Gene3D G3DSA:3.90.1150.10 23 395 8.2E-142 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D934_04785 6897724772b429dabe8cf20edf6a9e78 411 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 224 261 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D934_04785 6897724772b429dabe8cf20edf6a9e78 411 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 405 70.781 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 D934_04785 6897724772b429dabe8cf20edf6a9e78 411 SUPERFAMILY SSF53383 12 403 1.99E-119 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D934_04785 6897724772b429dabe8cf20edf6a9e78 411 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 402 4.4E-140 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 D934_04785 6897724772b429dabe8cf20edf6a9e78 411 Pfam PF00202 Aminotransferase class-III 20 402 4.8E-112 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D934_04785 6897724772b429dabe8cf20edf6a9e78 411 PIRSF PIRSF000521 173 405 2.2E-32 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D934_04785 6897724772b429dabe8cf20edf6a9e78 411 PIRSF PIRSF000521 21 159 3.0E-7 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D934_04785 6897724772b429dabe8cf20edf6a9e78 411 Gene3D G3DSA:3.40.640.10 58 306 8.2E-142 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D934_09825 bae85338686ec0b766d8b60731351768 527 SUPERFAMILY SSF52335 8 198 1.96E-64 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D934_09825 bae85338686ec0b766d8b60731351768 527 Pfam PF02142 MGS-like domain 20 132 1.8E-23 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain D934_09825 bae85338686ec0b766d8b60731351768 527 PIRSF PIRSF000414 3 527 1.7E-209 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D934_09825 bae85338686ec0b766d8b60731351768 527 SUPERFAMILY SSF53927 220 527 1.4E-123 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 D934_09825 bae85338686ec0b766d8b60731351768 527 SMART SM00798 138 459 1.9E-190 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D934_09825 bae85338686ec0b766d8b60731351768 527 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 458 1.4E-112 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D934_09825 bae85338686ec0b766d8b60731351768 527 SMART SM00851 20 133 3.2E-49 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain D934_09825 bae85338686ec0b766d8b60731351768 527 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 10 527 6.8E-216 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D934_09825 bae85338686ec0b766d8b60731351768 527 Gene3D G3DSA:3.40.140.20 392 527 1.3E-58 T 15-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D934_09825 bae85338686ec0b766d8b60731351768 527 Gene3D G3DSA:3.40.140.20 218 373 7.6E-55 T 15-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D934_09825 bae85338686ec0b766d8b60731351768 527 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 527 43.495 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D934_09825 bae85338686ec0b766d8b60731351768 527 Gene3D G3DSA:3.40.50.1380 2 202 1.7E-78 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D934_10790 1866e7f4e892fabd95ec8896ca0373da 196 Pfam PF02796 Helix-turn-helix domain of resolvase 147 188 3.6E-10 T 15-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 D934_10790 1866e7f4e892fabd95ec8896ca0373da 196 Gene3D G3DSA:1.10.10.60 150 192 2.1E-5 T 15-10-2018 D934_10790 1866e7f4e892fabd95ec8896ca0373da 196 SMART SM00857 4 145 2.4E-49 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D934_10790 1866e7f4e892fabd95ec8896ca0373da 196 Gene3D G3DSA:3.40.50.1390 4 134 5.5E-38 T 15-10-2018 D934_10790 1866e7f4e892fabd95ec8896ca0373da 196 SUPERFAMILY SSF46689 147 187 9.26E-6 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D934_10790 1866e7f4e892fabd95ec8896ca0373da 196 SUPERFAMILY SSF53041 3 144 4.19E-38 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 D934_10790 1866e7f4e892fabd95ec8896ca0373da 196 ProSitePatterns PS00398 Site-specific recombinases signature 2. 63 75 - T 15-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 D934_10790 1866e7f4e892fabd95ec8896ca0373da 196 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 15-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 D934_10790 1866e7f4e892fabd95ec8896ca0373da 196 Pfam PF00239 Resolvase, N terminal domain 4 144 7.6E-39 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D934_00450 cdac78eb4a85024af43d8e7e7d9a8108 282 Gene3D G3DSA:3.40.50.2300 140 277 9.0E-23 T 15-10-2018 D934_00450 cdac78eb4a85024af43d8e7e7d9a8108 282 Gene3D G3DSA:3.40.50.2300 4 139 1.0E-17 T 15-10-2018 D934_00450 cdac78eb4a85024af43d8e7e7d9a8108 282 SUPERFAMILY SSF52172 15 136 2.7E-20 T 15-10-2018 IPR011006 CheY-like superfamily D934_00450 cdac78eb4a85024af43d8e7e7d9a8108 282 SMART SM00448 143 266 2.1E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_00450 cdac78eb4a85024af43d8e7e7d9a8108 282 SMART SM00448 16 131 5.4E-9 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_00450 cdac78eb4a85024af43d8e7e7d9a8108 282 Pfam PF00072 Response regulator receiver domain 145 266 1.5E-16 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_00450 cdac78eb4a85024af43d8e7e7d9a8108 282 Pfam PF00072 Response regulator receiver domain 18 130 1.9E-11 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_00450 cdac78eb4a85024af43d8e7e7d9a8108 282 SUPERFAMILY SSF52172 142 278 7.97E-25 T 15-10-2018 IPR011006 CheY-like superfamily D934_04370 4a4e02f7ea36a880aeaf2e9afcb400c9 1466 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 797 871 2.8E-13 T 15-10-2018 IPR011709 Domain of unknown function DUF1605 D934_04370 4a4e02f7ea36a880aeaf2e9afcb400c9 1466 SMART SM00382 92 410 1.3E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_04370 4a4e02f7ea36a880aeaf2e9afcb400c9 1466 Pfam PF04408 Helicase associated domain (HA2) 530 603 1.5E-17 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 D934_04370 4a4e02f7ea36a880aeaf2e9afcb400c9 1466 SMART SM00490 344 444 8.4E-13 T 15-10-2018 IPR001650 Helicase, C-terminal D934_04370 4a4e02f7ea36a880aeaf2e9afcb400c9 1466 Gene3D G3DSA:3.40.50.300 302 460 1.7E-52 T 15-10-2018 D934_04370 4a4e02f7ea36a880aeaf2e9afcb400c9 1466 SUPERFAMILY SSF52540 77 644 4.11E-90 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04370 4a4e02f7ea36a880aeaf2e9afcb400c9 1466 SMART SM00487 75 259 8.0E-27 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_04370 4a4e02f7ea36a880aeaf2e9afcb400c9 1466 Pfam PF00271 Helicase conserved C-terminal domain 319 443 3.6E-10 T 15-10-2018 IPR001650 Helicase, C-terminal D934_04370 4a4e02f7ea36a880aeaf2e9afcb400c9 1466 Gene3D G3DSA:3.40.50.300 33 252 1.9E-77 T 15-10-2018 D934_04370 4a4e02f7ea36a880aeaf2e9afcb400c9 1466 Pfam PF11898 Domain of unknown function (DUF3418) 887 1463 1.1E-169 T 15-10-2018 IPR024590 RNA helicase HrpA, C-terminal D934_04370 4a4e02f7ea36a880aeaf2e9afcb400c9 1466 Gene3D G3DSA:1.20.120.1080 510 609 8.6E-20 T 15-10-2018 D934_04370 4a4e02f7ea36a880aeaf2e9afcb400c9 1466 SMART SM00847 527 617 2.4E-32 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 D934_04370 4a4e02f7ea36a880aeaf2e9afcb400c9 1466 Pfam PF00270 DEAD/DEAH box helicase 86 233 6.5E-7 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D934_02535 b7e5457dfd3410fa545fa36d1fb519d4 438 SUPERFAMILY SSF55729 301 417 7.68E-10 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase D934_02535 b7e5457dfd3410fa545fa36d1fb519d4 438 Pfam PF00696 Amino acid kinase family 40 252 1.3E-26 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D934_02535 b7e5457dfd3410fa545fa36d1fb519d4 438 Gene3D G3DSA:3.40.630.30 293 438 1.9E-57 T 15-10-2018 D934_02535 b7e5457dfd3410fa545fa36d1fb519d4 438 Gene3D G3DSA:3.40.1160.10 1 292 4.1E-89 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D934_02535 b7e5457dfd3410fa545fa36d1fb519d4 438 TIGRFAM TIGR00761 argB: acetylglutamate kinase 39 260 2.9E-60 T 15-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D934_02535 b7e5457dfd3410fa545fa36d1fb519d4 438 Pfam PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase 272 431 1.4E-52 T 15-10-2018 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|Reactome: R-HSA-70635 D934_02535 b7e5457dfd3410fa545fa36d1fb519d4 438 PIRSF PIRSF036441 18 438 3.4E-277 T 15-10-2018 IPR011242 Acetylglutamate kinase ArgB, GNAT domain-containing GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D934_02535 b7e5457dfd3410fa545fa36d1fb519d4 438 SUPERFAMILY SSF53633 13 290 3.91E-51 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D934_06140 694cfa82f4f2e846e6d8ebfd1e47af1b 317 Pfam PF00753 Metallo-beta-lactamase superfamily 66 251 3.4E-12 T 15-10-2018 IPR001279 Metallo-beta-lactamase D934_06140 694cfa82f4f2e846e6d8ebfd1e47af1b 317 SMART SM00849 66 251 6.4E-25 T 15-10-2018 IPR001279 Metallo-beta-lactamase D934_06140 694cfa82f4f2e846e6d8ebfd1e47af1b 317 Gene3D G3DSA:3.60.15.10 48 286 3.8E-32 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D934_06140 694cfa82f4f2e846e6d8ebfd1e47af1b 317 SUPERFAMILY SSF56281 49 275 6.16E-42 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D934_05910 9310b42452f62bb7a8549be1ef9528bf 396 Gene3D G3DSA:2.60.410.10 288 377 1.1E-27 T 15-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_05910 9310b42452f62bb7a8549be1ef9528bf 396 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 288 374 5.9E-23 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_05910 9310b42452f62bb7a8549be1ef9528bf 396 SUPERFAMILY SSF69189 288 380 3.92E-24 T 15-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_05910 9310b42452f62bb7a8549be1ef9528bf 396 SMART SM00936 288 378 3.1E-29 T 15-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_05910 9310b42452f62bb7a8549be1ef9528bf 396 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 38 267 8.9E-78 T 15-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 D934_05910 9310b42452f62bb7a8549be1ef9528bf 396 SUPERFAMILY SSF56601 4 288 1.12E-79 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D934_05910 9310b42452f62bb7a8549be1ef9528bf 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 128 145 6.1E-17 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 D934_05910 9310b42452f62bb7a8549be1ef9528bf 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 6.1E-17 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 D934_05910 9310b42452f62bb7a8549be1ef9528bf 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 155 168 6.1E-17 T 15-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 D934_05910 9310b42452f62bb7a8549be1ef9528bf 396 Gene3D G3DSA:3.40.710.10 30 286 5.6E-85 T 15-10-2018 D934_10410 c4820071ee64acf91c4291b706069e0f 531 SUPERFAMILY SSF52833 105 198 3.29E-24 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_10410 c4820071ee64acf91c4291b706069e0f 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 215 237 2.2E-64 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_10410 c4820071ee64acf91c4291b706069e0f 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 2.2E-64 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_10410 c4820071ee64acf91c4291b706069e0f 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 267 277 2.2E-64 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_10410 c4820071ee64acf91c4291b706069e0f 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 2.2E-64 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_10410 c4820071ee64acf91c4291b706069e0f 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 2.2E-64 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_10410 c4820071ee64acf91c4291b706069e0f 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 2.2E-64 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_10410 c4820071ee64acf91c4291b706069e0f 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 2.2E-64 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_10410 c4820071ee64acf91c4291b706069e0f 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 2.2E-64 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_10410 c4820071ee64acf91c4291b706069e0f 531 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 247 262 2.2E-64 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_10410 c4820071ee64acf91c4291b706069e0f 531 Gene3D G3DSA:3.50.50.60 327 450 4.0E-110 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_10410 c4820071ee64acf91c4291b706069e0f 531 PIRSF PIRSF000238 1 521 6.7E-264 T 15-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 D934_10410 c4820071ee64acf91c4291b706069e0f 531 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 15-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 D934_10410 c4820071ee64acf91c4291b706069e0f 531 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 7.4E-234 T 15-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 D934_10410 c4820071ee64acf91c4291b706069e0f 531 Gene3D G3DSA:3.50.50.60 214 508 4.0E-110 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_10410 c4820071ee64acf91c4291b706069e0f 531 SUPERFAMILY SSF52833 1 103 5.03E-26 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_10410 c4820071ee64acf91c4291b706069e0f 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 4.1E-39 T 15-10-2018 D934_10410 c4820071ee64acf91c4291b706069e0f 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 4.1E-39 T 15-10-2018 D934_10410 c4820071ee64acf91c4291b706069e0f 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 216 235 4.1E-39 T 15-10-2018 D934_10410 c4820071ee64acf91c4291b706069e0f 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 4.1E-39 T 15-10-2018 D934_10410 c4820071ee64acf91c4291b706069e0f 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 4.1E-39 T 15-10-2018 D934_10410 c4820071ee64acf91c4291b706069e0f 531 Gene3D G3DSA:3.40.30.80 1 201 4.0E-56 T 15-10-2018 D934_10410 c4820071ee64acf91c4291b706069e0f 531 SUPERFAMILY SSF51905 209 515 1.97E-52 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_10410 c4820071ee64acf91c4291b706069e0f 531 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 214 504 1.1E-45 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D934_10410 c4820071ee64acf91c4291b706069e0f 531 Pfam PF13192 Thioredoxin domain 127 196 1.8E-8 T 15-10-2018 IPR012336 Thioredoxin-like fold D934_03945 2697703e222db48ee4e3ad87590a9edc 231 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 226 1.3E-74 T 15-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 D934_03945 2697703e222db48ee4e3ad87590a9edc 231 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 227 39.559 T 15-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 D934_03945 2697703e222db48ee4e3ad87590a9edc 231 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 227 1.3E-58 T 15-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 D934_03945 2697703e222db48ee4e3ad87590a9edc 231 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 103 110 - T 15-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 D934_03945 2697703e222db48ee4e3ad87590a9edc 231 SUPERFAMILY SSF53448 5 226 5.41E-54 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_03945 2697703e222db48ee4e3ad87590a9edc 231 Gene3D G3DSA:3.90.550.10 3 231 2.6E-65 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_13455 b1f24590dd943a044b7c1dcb32f37987 207 SUPERFAMILY SSF52540 6 192 3.62E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_13455 b1f24590dd943a044b7c1dcb32f37987 207 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 6 185 3.0E-47 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 D934_13455 b1f24590dd943a044b7c1dcb32f37987 207 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 199 25.155 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 D934_13455 b1f24590dd943a044b7c1dcb32f37987 207 Pfam PF01121 Dephospho-CoA kinase 5 181 1.7E-55 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 D934_13455 b1f24590dd943a044b7c1dcb32f37987 207 Gene3D G3DSA:3.40.50.300 2 205 4.4E-59 T 15-10-2018 D934_05805 c9ef3b05ef81af2adb5a93d5430fda20 478 Pfam PF13520 Amino acid permease 27 444 1.6E-61 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D934_05805 c9ef3b05ef81af2adb5a93d5430fda20 478 PIRSF PIRSF006060 8 477 9.3E-95 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D934_05805 c9ef3b05ef81af2adb5a93d5430fda20 478 Gene3D G3DSA:1.20.1740.10 22 477 7.4E-121 T 15-10-2018 D934_08210 55d564c22a81a57ad06ad28882f5db53 128 SMART SM00448 2 115 6.1E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_08210 55d564c22a81a57ad06ad28882f5db53 128 Gene3D G3DSA:3.40.50.12740 1 128 1.4E-41 T 15-10-2018 D934_08210 55d564c22a81a57ad06ad28882f5db53 128 Pfam PF00072 Response regulator receiver domain 4 114 1.7E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_08210 55d564c22a81a57ad06ad28882f5db53 128 SUPERFAMILY SSF52172 1 121 1.99E-37 T 15-10-2018 IPR011006 CheY-like superfamily D934_01760 5d0bbefede6091ab214ccdfc435b04b8 277 SUPERFAMILY SSF101386 10 111 9.53E-24 T 15-10-2018 D934_01760 5d0bbefede6091ab214ccdfc435b04b8 277 Gene3D G3DSA:1.10.287.1080 8 132 1.2E-44 T 15-10-2018 D934_01760 5d0bbefede6091ab214ccdfc435b04b8 277 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 34 107 1.3E-27 T 15-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core D934_01760 5d0bbefede6091ab214ccdfc435b04b8 277 SUPERFAMILY SSF101386 147 246 3.27E-8 T 15-10-2018 D934_01760 5d0bbefede6091ab214ccdfc435b04b8 277 TIGRFAM TIGR00444 mazG: MazG family protein 17 267 2.1E-78 T 15-10-2018 IPR011551 NTP pyrophosphohydrolase MazG D934_01760 5d0bbefede6091ab214ccdfc435b04b8 277 Gene3D G3DSA:1.10.287.1080 138 273 6.0E-26 T 15-10-2018 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 Gene3D G3DSA:1.20.1640.10 10 504 5.1E-270 T 15-10-2018 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 SUPERFAMILY SSF82866 290 489 2.88E-44 T 15-10-2018 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 Pfam PF00873 AcrB/AcrD/AcrF family 6 1012 6.5E-279 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 Gene3D G3DSA:3.30.2090.10 708 796 5.1E-270 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 SUPERFAMILY SSF82714 712 793 1.57E-16 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 Gene3D G3DSA:3.30.2090.10 178 269 5.1E-270 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 Gene3D G3DSA:3.30.70.1320 134 326 5.1E-270 T 15-10-2018 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 Gene3D G3DSA:1.20.1640.10 505 1009 5.1E-270 T 15-10-2018 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 Gene3D G3DSA:3.30.70.1430 40 804 5.1E-270 T 15-10-2018 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 SUPERFAMILY SSF82693 135 324 1.08E-21 T 15-10-2018 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 9.9E-55 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 9.9E-55 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 9.9E-55 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.9E-55 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.9E-55 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 9.9E-55 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 9.9E-55 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 9.9E-55 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 SUPERFAMILY SSF82714 182 265 2.62E-15 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 SUPERFAMILY SSF82693 40 134 1.07E-21 T 15-10-2018 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 Gene3D G3DSA:3.30.70.1440 657 851 5.1E-270 T 15-10-2018 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 SUPERFAMILY SSF82866 795 1013 3.66E-41 T 15-10-2018 D934_11120 6778fa35ff58ed13d8c2b7fbb8061c34 1032 Gene3D G3DSA:3.30.70.1430 559 656 5.1E-270 T 15-10-2018 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 Gene3D G3DSA:1.20.1270.10 525 603 8.3E-21 T 15-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 SUPERFAMILY SSF100920 385 541 1.44E-57 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 Gene3D G3DSA:3.30.420.40 181 367 9.6E-165 T 15-10-2018 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 36.077 T 15-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 Gene3D G3DSA:2.60.34.10 384 524 2.8E-61 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 SUPERFAMILY SSF53067 188 383 9.26E-67 T 15-10-2018 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 Gene3D G3DSA:3.30.420.40 5 380 9.6E-165 T 15-10-2018 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 Gene3D G3DSA:3.90.640.10 230 317 9.6E-165 T 15-10-2018 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 PRINTS PR00301 70kDa heat shock protein signature 366 386 2.9E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.9E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 PRINTS PR00301 70kDa heat shock protein signature 199 209 2.9E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 PRINTS PR00301 70kDa heat shock protein signature 139 159 2.9E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.9E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 PRINTS PR00301 70kDa heat shock protein signature 335 351 2.9E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 PRINTS PR00301 70kDa heat shock protein signature 389 408 2.9E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.9E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 PRINTS PR00301 70kDa heat shock protein signature 470 486 2.9E-80 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 Pfam PF00012 Hsp70 protein 4 600 4.0E-258 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 1.5E-283 T 15-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 D934_10945 c7d22dd29759429f7cc3c9a90e9e866b 638 SUPERFAMILY SSF53067 1 184 1.2E-64 T 15-10-2018 D934_10490 d332885c461814747d06305b124f1115 562 Pfam PF00437 Type II/IV secretion system protein 187 451 3.1E-85 T 15-10-2018 IPR001482 Type II/IV secretion system protein D934_10490 d332885c461814747d06305b124f1115 562 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 79 559 4.3E-217 T 15-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 D934_10490 d332885c461814747d06305b124f1115 562 SMART SM00382 312 433 1.9E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_10490 d332885c461814747d06305b124f1115 562 Gene3D G3DSA:3.30.300.160 59 144 6.4E-29 T 15-10-2018 D934_10490 d332885c461814747d06305b124f1115 562 Gene3D G3DSA:3.30.450.90 154 284 1.4E-49 T 15-10-2018 D934_10490 d332885c461814747d06305b124f1115 562 Gene3D G3DSA:1.10.40.70 1 58 1.2E-25 T 15-10-2018 D934_10490 d332885c461814747d06305b124f1115 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 379 393 - T 15-10-2018 IPR001482 Type II/IV secretion system protein D934_10490 d332885c461814747d06305b124f1115 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 40 147 9.1E-14 T 15-10-2018 IPR007831 General secretory system II, protein E, N-terminal D934_10490 d332885c461814747d06305b124f1115 562 SUPERFAMILY SSF52540 169 559 1.09E-93 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_10490 d332885c461814747d06305b124f1115 562 Gene3D G3DSA:3.40.50.300 287 561 4.9E-103 T 15-10-2018 D934_10490 d332885c461814747d06305b124f1115 562 SUPERFAMILY SSF160246 4 144 6.02E-29 T 15-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily D934_10080 b4a710d740a70e9e8d32adb829d6fb06 139 Pfam PF13470 PIN domain 3 114 2.2E-15 T 15-10-2018 IPR002716 PIN domain D934_10080 b4a710d740a70e9e8d32adb829d6fb06 139 SMART SM00670 1 117 2.1E-9 T 15-10-2018 IPR002716 PIN domain D934_10080 b4a710d740a70e9e8d32adb829d6fb06 139 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 2 113 3.9E-15 T 15-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component D934_10080 b4a710d740a70e9e8d32adb829d6fb06 139 SUPERFAMILY SSF88723 1 115 2.05E-12 T 15-10-2018 IPR029060 PIN-like domain superfamily D934_04250 3d733a0a6ddb847c9b024d11338766d4 401 Gene3D G3DSA:3.40.640.10 60 291 1.1E-123 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D934_04250 3d733a0a6ddb847c9b024d11338766d4 401 Gene3D G3DSA:3.90.1150.10 44 382 1.1E-123 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D934_04250 3d733a0a6ddb847c9b024d11338766d4 401 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 15-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 D934_04250 3d733a0a6ddb847c9b024d11338766d4 401 Pfam PF00155 Aminotransferase class I and II 45 385 5.8E-59 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D934_04250 3d733a0a6ddb847c9b024d11338766d4 401 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 385 3.8E-144 T 15-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 D934_04250 3d733a0a6ddb847c9b024d11338766d4 401 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 6 389 44.473 T 15-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 D934_04250 3d733a0a6ddb847c9b024d11338766d4 401 SUPERFAMILY SSF53383 9 389 3.89E-102 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D934_00495 493ea33c4a68480d42942650ec665047 574 Pfam PF04389 Peptidase family M28 314 500 1.1E-26 T 15-10-2018 IPR007484 Peptidase M28 D934_00495 493ea33c4a68480d42942650ec665047 574 Gene3D G3DSA:3.40.630.10 241 520 1.2E-36 T 15-10-2018 D934_00495 493ea33c4a68480d42942650ec665047 574 Pfam PF02225 PA domain 148 225 1.3E-5 T 15-10-2018 IPR003137 PA domain D934_00495 493ea33c4a68480d42942650ec665047 574 SUPERFAMILY SSF53187 44 536 1.92E-41 T 15-10-2018 D934_08275 db44fe250ff082782164dccfa802a766 465 Gene3D G3DSA:3.40.50.300 5 168 5.2E-41 T 15-10-2018 D934_08275 db44fe250ff082782164dccfa802a766 465 SMART SM00382 1 148 1.0 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_08275 db44fe250ff082782164dccfa802a766 465 SMART SM00382 177 328 0.2 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_08275 db44fe250ff082782164dccfa802a766 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 178 344 4.0E-25 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D934_08275 db44fe250ff082782164dccfa802a766 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 159 1.1E-24 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D934_08275 db44fe250ff082782164dccfa802a766 465 SUPERFAMILY SSF52540 1 166 3.21E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08275 db44fe250ff082782164dccfa802a766 465 Gene3D G3DSA:3.30.300.20 354 436 5.1E-20 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta D934_08275 db44fe250ff082782164dccfa802a766 465 Pfam PF01926 50S ribosome-binding GTPase 180 298 2.9E-24 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_08275 db44fe250ff082782164dccfa802a766 465 Pfam PF01926 50S ribosome-binding GTPase 5 120 4.1E-25 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_08275 db44fe250ff082782164dccfa802a766 465 Gene3D G3DSA:3.40.50.300 173 349 5.9E-48 T 15-10-2018 D934_08275 db44fe250ff082782164dccfa802a766 465 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 434 8.0E-160 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 D934_08275 db44fe250ff082782164dccfa802a766 465 SUPERFAMILY SSF52540 139 440 1.71E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08275 db44fe250ff082782164dccfa802a766 465 PIRSF PIRSF006485 1 442 2.7E-167 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 D934_08275 db44fe250ff082782164dccfa802a766 465 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 355 434 2.3E-22 T 15-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like D934_08275 db44fe250ff082782164dccfa802a766 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 2.8E-7 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_08275 db44fe250ff082782164dccfa802a766 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.8E-7 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_08275 db44fe250ff082782164dccfa802a766 465 Hamap MF_00195 GTPase Der [der]. 2 437 36.048 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 D934_10305 6530b78377785b82750c456b12c9ef9d 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 450 1.7E-116 T 15-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D934_10305 6530b78377785b82750c456b12c9ef9d 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 5.8E-48 T 15-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 D934_10305 6530b78377785b82750c456b12c9ef9d 455 Gene3D G3DSA:1.10.275.10 1 117 2.4E-41 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal D934_10305 6530b78377785b82750c456b12c9ef9d 455 SUPERFAMILY SSF48557 5 439 3.46E-97 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 D934_10305 6530b78377785b82750c456b12c9ef9d 455 Gene3D G3DSA:1.20.200.10 118 446 3.7E-151 T 15-10-2018 D934_10305 6530b78377785b82750c456b12c9ef9d 455 Pfam PF00206 Lyase 14 312 1.0E-60 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal D934_10305 6530b78377785b82750c456b12c9ef9d 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 D934_10305 6530b78377785b82750c456b12c9ef9d 455 Gene3D G3DSA:1.10.40.30 382 445 3.7E-151 T 15-10-2018 D934_10305 6530b78377785b82750c456b12c9ef9d 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 1.1E-18 T 15-10-2018 IPR000362 Fumarate lyase family D934_10305 6530b78377785b82750c456b12c9ef9d 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.1E-18 T 15-10-2018 IPR000362 Fumarate lyase family D934_10305 6530b78377785b82750c456b12c9ef9d 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.1E-18 T 15-10-2018 IPR000362 Fumarate lyase family D934_10305 6530b78377785b82750c456b12c9ef9d 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 1.1E-18 T 15-10-2018 IPR000362 Fumarate lyase family D934_05890 513edef94e286b6c53e06320288e4290 835 PIRSF PIRSF000727 20 832 0.0 T 15-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D934_05890 513edef94e286b6c53e06320288e4290 835 Pfam PF00696 Amino acid kinase family 20 300 5.8E-45 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D934_05890 513edef94e286b6c53e06320288e4290 835 Gene3D G3DSA:3.40.50.720 482 828 3.3E-124 T 15-10-2018 D934_05890 513edef94e286b6c53e06320288e4290 835 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 487 621 5.0E-22 T 15-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 D934_05890 513edef94e286b6c53e06320288e4290 835 Pfam PF00742 Homoserine dehydrogenase 629 825 4.6E-51 T 15-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 D934_05890 513edef94e286b6c53e06320288e4290 835 SUPERFAMILY SSF55021 402 490 7.4E-22 T 15-10-2018 D934_05890 513edef94e286b6c53e06320288e4290 835 Pfam PF13840 ACT domain 409 469 3.3E-7 T 15-10-2018 IPR027795 CASTOR, ACT domain D934_05890 513edef94e286b6c53e06320288e4290 835 Pfam PF13840 ACT domain 328 389 2.7E-8 T 15-10-2018 IPR027795 CASTOR, ACT domain D934_05890 513edef94e286b6c53e06320288e4290 835 ProSitePatterns PS00324 Aspartokinase signature. 22 30 - T 15-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D934_05890 513edef94e286b6c53e06320288e4290 835 Gene3D G3DSA:3.40.1160.10 19 315 8.2E-92 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D934_05890 513edef94e286b6c53e06320288e4290 835 SUPERFAMILY SSF55347 629 812 7.85E-49 T 15-10-2018 D934_05890 513edef94e286b6c53e06320288e4290 835 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 675 697 - T 15-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 D934_05890 513edef94e286b6c53e06320288e4290 835 Gene3D G3DSA:3.30.2130.10 318 475 2.1E-44 T 15-10-2018 D934_05890 513edef94e286b6c53e06320288e4290 835 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 20 474 3.1E-108 T 15-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D934_05890 513edef94e286b6c53e06320288e4290 835 Gene3D G3DSA:3.30.360.10 640 810 3.3E-124 T 15-10-2018 D934_05890 513edef94e286b6c53e06320288e4290 835 SUPERFAMILY SSF53633 19 314 5.79E-73 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D934_05890 513edef94e286b6c53e06320288e4290 835 SUPERFAMILY SSF51735 479 651 1.91E-35 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_05890 513edef94e286b6c53e06320288e4290 835 SUPERFAMILY SSF55021 321 395 9.87E-19 T 15-10-2018 D934_08955 ddb66f86e4e0d4ab715d97a7ea1c8542 79 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 4 65 8.9E-25 T 15-10-2018 IPR031856 Putative bacterial antitoxin YdaS D934_08955 ddb66f86e4e0d4ab715d97a7ea1c8542 79 Gene3D G3DSA:1.10.260.40 1 63 3.4E-31 T 15-10-2018 D934_08955 ddb66f86e4e0d4ab715d97a7ea1c8542 79 SUPERFAMILY SSF47413 4 63 1.17E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_07735 ddb66f86e4e0d4ab715d97a7ea1c8542 79 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 4 65 8.9E-25 T 15-10-2018 IPR031856 Putative bacterial antitoxin YdaS D934_07735 ddb66f86e4e0d4ab715d97a7ea1c8542 79 Gene3D G3DSA:1.10.260.40 1 63 3.4E-31 T 15-10-2018 D934_07735 ddb66f86e4e0d4ab715d97a7ea1c8542 79 SUPERFAMILY SSF47413 4 63 1.17E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_02550 af2b09e7b3820305e2c080723397a38c 384 Pfam PF01472 PUA domain 289 365 1.1E-19 T 15-10-2018 IPR002478 PUA domain GO:0003723 D934_02550 af2b09e7b3820305e2c080723397a38c 384 Gene3D G3DSA:2.30.130.10 278 384 2.4E-28 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 D934_02550 af2b09e7b3820305e2c080723397a38c 384 TIGRFAM TIGR01027 proB: glutamate 5-kinase 21 382 6.6E-117 T 15-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D934_02550 af2b09e7b3820305e2c080723397a38c 384 SUPERFAMILY SSF88697 289 383 1.71E-22 T 15-10-2018 IPR015947 PUA-like superfamily D934_02550 af2b09e7b3820305e2c080723397a38c 384 Hamap MF_00456 Glutamate 5-kinase [proB]. 19 271 33.872 T 15-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D934_02550 af2b09e7b3820305e2c080723397a38c 384 Gene3D G3DSA:3.40.1160.10 13 277 2.4E-74 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D934_02550 af2b09e7b3820305e2c080723397a38c 384 PRINTS PR00474 Glutamate 5-kinase family signature 160 187 3.2E-38 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D934_02550 af2b09e7b3820305e2c080723397a38c 384 PRINTS PR00474 Glutamate 5-kinase family signature 56 70 3.2E-38 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D934_02550 af2b09e7b3820305e2c080723397a38c 384 PRINTS PR00474 Glutamate 5-kinase family signature 128 149 3.2E-38 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D934_02550 af2b09e7b3820305e2c080723397a38c 384 PRINTS PR00474 Glutamate 5-kinase family signature 221 241 3.2E-38 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D934_02550 af2b09e7b3820305e2c080723397a38c 384 SUPERFAMILY SSF53633 20 269 2.49E-60 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D934_02550 af2b09e7b3820305e2c080723397a38c 384 PIRSF PIRSF000729 16 384 6.4E-127 T 15-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 D934_02550 af2b09e7b3820305e2c080723397a38c 384 ProSitePatterns PS00902 Glutamate 5-kinase signature. 219 236 - T 15-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D934_02550 af2b09e7b3820305e2c080723397a38c 384 Pfam PF00696 Amino acid kinase family 22 247 1.1E-38 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D934_02550 af2b09e7b3820305e2c080723397a38c 384 SMART SM00359 289 376 6.3E-14 T 15-10-2018 IPR002478 PUA domain GO:0003723 D934_13145 549c3200570cc049625cbf7e990ff689 313 Gene3D G3DSA:3.30.230.20 10 136 1.9E-47 T 15-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D934_13145 549c3200570cc049625cbf7e990ff689 313 SUPERFAMILY SSF54211 143 286 5.01E-49 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_13145 549c3200570cc049625cbf7e990ff689 313 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 11 288 46.09 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D934_13145 549c3200570cc049625cbf7e990ff689 313 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 13 284 4.9E-103 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D934_13145 549c3200570cc049625cbf7e990ff689 313 Gene3D G3DSA:3.30.1700.10 137 312 2.8E-63 T 15-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D934_13145 549c3200570cc049625cbf7e990ff689 313 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 12 301 1.6E-114 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D934_13145 549c3200570cc049625cbf7e990ff689 313 SUPERFAMILY SSF54211 12 133 7.28E-41 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_04310 bbb2e91527670768e2e689f48519db7c 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 326 1.8E-56 T 15-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D934_04310 bbb2e91527670768e2e689f48519db7c 344 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 11 340 5.3E-138 T 15-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D934_04310 bbb2e91527670768e2e689f48519db7c 344 SUPERFAMILY SSF55347 135 327 3.27E-72 T 15-10-2018 D934_04310 bbb2e91527670768e2e689f48519db7c 344 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 9 340 36.701 T 15-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D934_04310 bbb2e91527670768e2e689f48519db7c 344 Gene3D G3DSA:3.40.50.720 12 338 6.4E-145 T 15-10-2018 D934_04310 bbb2e91527670768e2e689f48519db7c 344 Gene3D G3DSA:3.30.360.10 136 322 6.4E-145 T 15-10-2018 D934_04310 bbb2e91527670768e2e689f48519db7c 344 SMART SM00859 11 126 5.4E-45 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D934_04310 bbb2e91527670768e2e689f48519db7c 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 11 125 1.7E-32 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D934_04310 bbb2e91527670768e2e689f48519db7c 344 SUPERFAMILY SSF51735 10 163 2.41E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_04310 bbb2e91527670768e2e689f48519db7c 344 PIRSF PIRSF000148 9 344 1.3E-128 T 15-10-2018 D934_01815 738d0844cc70d2ae1e405268a20cd267 199 Gene3D G3DSA:3.40.50.150 2 182 2.2E-15 T 15-10-2018 D934_01815 738d0844cc70d2ae1e405268a20cd267 199 Pfam PF13489 Methyltransferase domain 41 164 4.6E-8 T 15-10-2018 D934_01815 738d0844cc70d2ae1e405268a20cd267 199 SUPERFAMILY SSF53335 25 182 6.6E-17 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_01110 b91e5b8159b3a3a75efce3c1c9ade8b1 455 Gene3D G3DSA:3.30.470.20 86 433 1.7E-153 T 15-10-2018 D934_01110 b91e5b8159b3a3a75efce3c1c9ade8b1 455 SUPERFAMILY SSF52440 1 113 5.54E-47 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D934_01110 b91e5b8159b3a3a75efce3c1c9ade8b1 455 SUPERFAMILY SSF51246 331 444 7.32E-43 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 D934_01110 b91e5b8159b3a3a75efce3c1c9ade8b1 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D934_01110 b91e5b8159b3a3a75efce3c1c9ade8b1 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 5.4E-230 T 15-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 D934_01110 b91e5b8159b3a3a75efce3c1c9ade8b1 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.7E-38 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D934_01110 b91e5b8159b3a3a75efce3c1c9ade8b1 455 Gene3D G3DSA:3.30.1490.20 131 203 1.7E-153 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D934_01110 b91e5b8159b3a3a75efce3c1c9ade8b1 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D934_01110 b91e5b8159b3a3a75efce3c1c9ade8b1 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 2.2E-83 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D934_01110 b91e5b8159b3a3a75efce3c1c9ade8b1 455 SMART SM00878 336 441 1.4E-64 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D934_01110 b91e5b8159b3a3a75efce3c1c9ade8b1 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.4E-44 T 15-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D934_01110 b91e5b8159b3a3a75efce3c1c9ade8b1 455 SUPERFAMILY SSF56059 83 343 4.24E-67 T 15-10-2018 D934_01110 b91e5b8159b3a3a75efce3c1c9ade8b1 455 Gene3D G3DSA:3.40.50.20 1 85 7.8E-35 T 15-10-2018 D934_12250 d3b1afe4055edb0e2ea0bea708fc8539 178 Pfam PF00114 Pilin (bacterial filament) 36 167 3.6E-26 T 15-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 D934_12250 d3b1afe4055edb0e2ea0bea708fc8539 178 Gene3D G3DSA:3.30.700.10 8 169 5.5E-18 T 15-10-2018 D934_12250 d3b1afe4055edb0e2ea0bea708fc8539 178 SUPERFAMILY SSF54523 29 168 4.71E-18 T 15-10-2018 D934_07670 d3b1afe4055edb0e2ea0bea708fc8539 178 Pfam PF00114 Pilin (bacterial filament) 36 167 3.6E-26 T 15-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 D934_07670 d3b1afe4055edb0e2ea0bea708fc8539 178 Gene3D G3DSA:3.30.700.10 8 169 5.5E-18 T 15-10-2018 D934_07670 d3b1afe4055edb0e2ea0bea708fc8539 178 SUPERFAMILY SSF54523 29 168 4.71E-18 T 15-10-2018 D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 Gene3D G3DSA:1.20.50.20 364 419 2.7E-13 T 15-10-2018 D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 Hamap MF_00974 DNA primase [dnaG]. 3 571 28.051 T 15-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 Gene3D G3DSA:3.90.580.10 1 101 1.6E-36 T 15-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 TIGRFAM TIGR01391 dnaG: DNA primase 3 413 6.0E-139 T 15-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 Gene3D G3DSA:3.40.1360.10 237 363 1.1E-41 T 15-10-2018 D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 247 3.7E-41 T 15-10-2018 IPR013264 DNA primase, catalytic core, N-terminal D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 SUPERFAMILY SSF57783 1 99 6.29E-35 T 15-10-2018 D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 Pfam PF01807 CHC2 zinc finger 5 100 1.3E-36 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 Gene3D G3DSA:3.90.980.10 108 236 4.2E-39 T 15-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 SMART SM00493 255 326 2.0E-20 T 15-10-2018 IPR006171 TOPRIM domain D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 Gene3D G3DSA:1.10.860.10 431 576 1.5E-30 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 Pfam PF13662 Toprim domain 256 320 1.9E-14 T 15-10-2018 IPR006171 TOPRIM domain D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 SUPERFAMILY SSF56731 113 417 6.93E-105 T 15-10-2018 D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 SUPERFAMILY SSF117023 440 573 6.28E-29 T 15-10-2018 D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 SMART SM00766 443 570 9.7E-36 T 15-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 Pfam PF10410 DnaB-helicase binding domain of primase 365 418 2.2E-11 T 15-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 Pfam PF08278 DNA primase DnaG DnaB-binding 446 569 1.6E-24 T 15-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 D934_08130 a9ddcf0eef61e7e849ca3d247474323d 577 SMART SM00400 35 89 1.0E-29 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D934_04110 8ee87c34a062438fb389a790b22c7c4b 189 Pfam PF04264 YceI-like domain 47 181 6.4E-25 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D934_04110 8ee87c34a062438fb389a790b22c7c4b 189 Gene3D G3DSA:2.40.128.110 48 189 9.9E-31 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D934_04110 8ee87c34a062438fb389a790b22c7c4b 189 SUPERFAMILY SSF101874 31 187 2.88E-34 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D934_04110 8ee87c34a062438fb389a790b22c7c4b 189 SMART SM00867 29 187 4.5E-33 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D934_00600 9aaac5973d1bbf67693dea62f410cbf1 1009 Pfam PF04851 Type III restriction enzyme, res subunit 292 460 9.3E-33 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 D934_00600 9aaac5973d1bbf67693dea62f410cbf1 1009 Gene3D G3DSA:1.20.58.2040 757 860 8.5E-29 T 15-10-2018 D934_00600 9aaac5973d1bbf67693dea62f410cbf1 1009 Gene3D G3DSA:3.90.1570.50 37 285 7.3E-99 T 15-10-2018 D934_00600 9aaac5973d1bbf67693dea62f410cbf1 1009 Gene3D G3DSA:3.40.50.300 292 487 1.1E-65 T 15-10-2018 D934_00600 9aaac5973d1bbf67693dea62f410cbf1 1009 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 37 222 2.1E-45 T 15-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 D934_00600 9aaac5973d1bbf67693dea62f410cbf1 1009 Gene3D G3DSA:3.40.50.300 488 756 5.8E-91 T 15-10-2018 D934_00600 9aaac5973d1bbf67693dea62f410cbf1 1009 Gene3D G3DSA:3.90.640.50 63 135 7.3E-99 T 15-10-2018 D934_00600 9aaac5973d1bbf67693dea62f410cbf1 1009 SMART SM00487 289 490 8.4E-20 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_00600 9aaac5973d1bbf67693dea62f410cbf1 1009 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 42 750 2.8E-166 T 15-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 D934_00600 9aaac5973d1bbf67693dea62f410cbf1 1009 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 753 1005 1.2E-69 T 15-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal D934_00600 9aaac5973d1bbf67693dea62f410cbf1 1009 SUPERFAMILY SSF52540 249 460 1.67E-31 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_11015 250ae10ca7a728f54102142939ecbf47 165 PIRSF PIRSF016487 1 165 6.6E-62 T 15-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like D934_11015 250ae10ca7a728f54102142939ecbf47 165 Pfam PF01928 CYTH domain 2 141 3.1E-14 T 15-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 D934_11015 250ae10ca7a728f54102142939ecbf47 165 SUPERFAMILY SSF55154 1 155 1.8E-37 T 15-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 D934_11015 250ae10ca7a728f54102142939ecbf47 165 Gene3D G3DSA:2.40.320.10 1 157 3.1E-41 T 15-10-2018 D934_11015 250ae10ca7a728f54102142939ecbf47 165 SMART SM01118 2 155 1.8E-19 T 15-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 D934_10955 2d0298ff2d3c69cbb8d390469dd96322 349 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 10 342 4.0E-103 T 15-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 D934_10955 2d0298ff2d3c69cbb8d390469dd96322 349 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 10 80 2.2E-7 T 15-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 D934_10955 2d0298ff2d3c69cbb8d390469dd96322 349 Gene3D G3DSA:3.30.450.40 111 339 7.3E-41 T 15-10-2018 IPR029016 GAF-like domain superfamily D934_10955 2d0298ff2d3c69cbb8d390469dd96322 349 SUPERFAMILY SSF46785 9 90 3.66E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_10955 2d0298ff2d3c69cbb8d390469dd96322 349 PIRSF PIRSF005485 6 346 2.9E-110 T 15-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 D934_10955 2d0298ff2d3c69cbb8d390469dd96322 349 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 8 336 28.993 T 15-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 D934_10955 2d0298ff2d3c69cbb8d390469dd96322 349 SUPERFAMILY SSF55781 78 344 4.81E-63 T 15-10-2018 D934_10955 2d0298ff2d3c69cbb8d390469dd96322 349 Gene3D G3DSA:3.30.390.60 133 234 7.3E-41 T 15-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily D934_10955 2d0298ff2d3c69cbb8d390469dd96322 349 Gene3D G3DSA:1.10.10.10 3 90 2.3E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_10955 2d0298ff2d3c69cbb8d390469dd96322 349 Pfam PF01628 HrcA protein C terminal domain 110 329 1.5E-57 T 15-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 D934_05985 b18bee230eeec3b6f328380dd9c2d1ec 227 SUPERFAMILY SSF54768 109 223 1.24E-29 T 15-10-2018 D934_05985 b18bee230eeec3b6f328380dd9c2d1ec 227 SMART SM00358 156 224 1.5E-18 T 15-10-2018 IPR014720 Double-stranded RNA-binding domain D934_05985 b18bee230eeec3b6f328380dd9c2d1ec 227 Gene3D G3DSA:1.10.1520.10 2 147 1.6E-40 T 15-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 D934_05985 b18bee230eeec3b6f328380dd9c2d1ec 227 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 D934_05985 b18bee230eeec3b6f328380dd9c2d1ec 227 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 28.274 T 15-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 D934_05985 b18bee230eeec3b6f328380dd9c2d1ec 227 SUPERFAMILY SSF69065 6 158 4.36E-45 T 15-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 D934_05985 b18bee230eeec3b6f328380dd9c2d1ec 227 SMART SM00535 21 149 1.2E-49 T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 D934_05985 b18bee230eeec3b6f328380dd9c2d1ec 227 Pfam PF14622 Ribonuclease-III-like 19 138 1.6E-31 T 15-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 D934_05985 b18bee230eeec3b6f328380dd9c2d1ec 227 Gene3D G3DSA:3.30.160.20 154 226 1.8E-22 T 15-10-2018 D934_05985 b18bee230eeec3b6f328380dd9c2d1ec 227 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 10 223 4.5E-73 T 15-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 D934_05985 b18bee230eeec3b6f328380dd9c2d1ec 227 Pfam PF00035 Double-stranded RNA binding motif 156 223 2.8E-13 T 15-10-2018 IPR014720 Double-stranded RNA-binding domain D934_09880 94cf5d1348e2a8e2c7af6dba21adefa0 183 SUPERFAMILY SSF52833 1 176 2.5E-29 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_09880 94cf5d1348e2a8e2c7af6dba21adefa0 183 Gene3D G3DSA:3.40.30.10 21 177 1.5E-31 T 15-10-2018 D934_09880 94cf5d1348e2a8e2c7af6dba21adefa0 183 Pfam PF00578 AhpC/TSA family 50 160 1.3E-13 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D934_09880 94cf5d1348e2a8e2c7af6dba21adefa0 183 ProSitePatterns PS00194 Thioredoxin family active site. 73 91 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 D934_08005 963a149b0b212b99d97a0ff51a0d8614 389 Gene3D G3DSA:2.30.130.10 9 71 8.8E-15 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 D934_08005 963a149b0b212b99d97a0ff51a0d8614 389 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 174 329 1.6E-17 T 15-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 D934_08005 963a149b0b212b99d97a0ff51a0d8614 389 Gene3D G3DSA:3.40.50.150 178 388 1.9E-67 T 15-10-2018 D934_08005 963a149b0b212b99d97a0ff51a0d8614 389 SUPERFAMILY SSF53335 78 383 4.7E-66 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_08005 963a149b0b212b99d97a0ff51a0d8614 389 Gene3D G3DSA:3.30.750.80 72 177 1.4E-26 T 15-10-2018 D934_08005 963a149b0b212b99d97a0ff51a0d8614 389 SUPERFAMILY SSF88697 12 69 3.73E-9 T 15-10-2018 IPR015947 PUA-like superfamily D934_10985 8ebc1effcdf2db781c76f88f93a6a59d 167 Hamap MF_00023 SsrA-binding protein [smpB]. 1 166 68.671 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 D934_10985 8ebc1effcdf2db781c76f88f93a6a59d 167 Pfam PF01668 SmpB protein 19 161 8.1E-56 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 D934_10985 8ebc1effcdf2db781c76f88f93a6a59d 167 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 19 143 6.0E-68 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 D934_10985 8ebc1effcdf2db781c76f88f93a6a59d 167 ProSitePatterns PS01317 SsrA-binding protein. 37 49 - T 15-10-2018 IPR020081 SsrA-binding protein, conserved site D934_10985 8ebc1effcdf2db781c76f88f93a6a59d 167 SUPERFAMILY SSF74982 13 143 1.83E-48 T 15-10-2018 IPR023620 Small protein B D934_10985 8ebc1effcdf2db781c76f88f93a6a59d 167 TIGRFAM TIGR00086 smpB: SsrA-binding protein 19 160 6.5E-51 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 D934_10985 8ebc1effcdf2db781c76f88f93a6a59d 167 Gene3D G3DSA:2.40.280.10 11 140 1.0E-43 T 15-10-2018 IPR023620 Small protein B D934_13900 209b683ff49d4884486aff3366768c03 221 SUPERFAMILY SSF101082 31 206 7.98E-30 T 15-10-2018 D934_13900 209b683ff49d4884486aff3366768c03 221 Gene3D G3DSA:1.20.58.430 31 207 1.8E-33 T 15-10-2018 IPR023220 Type IV secretion system, VirB5-domain D934_13900 209b683ff49d4884486aff3366768c03 221 Pfam PF07996 Type IV secretion system proteins 31 206 6.1E-32 T 15-10-2018 IPR014158 Type IV secretion system, VirB5 D934_11840 d1062bdc729df0a2f9ba4ab6467e399d 346 Gene3D G3DSA:3.40.50.720 8 323 5.3E-143 T 15-10-2018 D934_11840 d1062bdc729df0a2f9ba4ab6467e399d 346 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 342 51.783 T 15-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 D934_11840 d1062bdc729df0a2f9ba4ab6467e399d 346 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 6 338 2.5E-140 T 15-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 D934_11840 d1062bdc729df0a2f9ba4ab6467e399d 346 SUPERFAMILY SSF51735 4 335 5.63E-71 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_11840 d1062bdc729df0a2f9ba4ab6467e399d 346 Gene3D G3DSA:3.90.25.10 189 337 5.3E-143 T 15-10-2018 D934_11840 d1062bdc729df0a2f9ba4ab6467e399d 346 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 332 7.3E-134 T 15-10-2018 IPR016040 NAD(P)-binding domain D934_07365 282c1ab927a28200e2d538523da18ed8 198 Pfam PF02132 RecR protein 39 77 1.7E-12 T 15-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger D934_07365 282c1ab927a28200e2d538523da18ed8 198 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 15-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 D934_07365 282c1ab927a28200e2d538523da18ed8 198 Gene3D G3DSA:3.40.1360.10 76 197 2.6E-39 T 15-10-2018 D934_07365 282c1ab927a28200e2d538523da18ed8 198 Gene3D G3DSA:1.10.8.420 2 51 3.6E-16 T 15-10-2018 D934_07365 282c1ab927a28200e2d538523da18ed8 198 SMART SM00493 79 164 8.0E-9 T 15-10-2018 IPR006171 TOPRIM domain D934_07365 282c1ab927a28200e2d538523da18ed8 198 TIGRFAM TIGR00615 recR: recombination protein RecR 3 194 4.8E-69 T 15-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 D934_07365 282c1ab927a28200e2d538523da18ed8 198 SUPERFAMILY SSF111304 3 197 6.54E-70 T 15-10-2018 IPR023627 Recombination protein RecR D934_07365 282c1ab927a28200e2d538523da18ed8 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 94.696 T 15-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 D934_07365 282c1ab927a28200e2d538523da18ed8 198 Pfam PF13662 Toprim domain 80 170 4.1E-21 T 15-10-2018 IPR006171 TOPRIM domain D934_10415 4a579530d3779f1f8b97a57e76e9c3ee 186 Pfam PF00578 AhpC/TSA family 10 132 1.2E-32 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D934_10415 4a579530d3779f1f8b97a57e76e9c3ee 186 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 186 2.0E-99 T 15-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 D934_10415 4a579530d3779f1f8b97a57e76e9c3ee 186 Gene3D G3DSA:3.40.30.10 1 185 8.3E-60 T 15-10-2018 D934_10415 4a579530d3779f1f8b97a57e76e9c3ee 186 SUPERFAMILY SSF52833 3 185 2.15E-55 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_10415 4a579530d3779f1f8b97a57e76e9c3ee 186 PIRSF PIRSF000239 1 186 1.2E-52 T 15-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D934_00570 eb3cfb170c9fc451ca4cd909c5189a61 1027 SUPERFAMILY SSF52540 316 748 2.7E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00570 eb3cfb170c9fc451ca4cd909c5189a61 1027 Pfam PF04851 Type III restriction enzyme, res subunit 295 497 3.5E-11 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 D934_00570 eb3cfb170c9fc451ca4cd909c5189a61 1027 Gene3D G3DSA:3.40.50.300 631 750 1.3E-20 T 15-10-2018 D934_00570 eb3cfb170c9fc451ca4cd909c5189a61 1027 SUPERFAMILY SSF52540 259 504 3.4E-21 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00570 eb3cfb170c9fc451ca4cd909c5189a61 1027 Gene3D G3DSA:3.90.1570.50 118 278 6.7E-9 T 15-10-2018 D934_00570 eb3cfb170c9fc451ca4cd909c5189a61 1027 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 134 223 2.9E-15 T 15-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 D934_00570 eb3cfb170c9fc451ca4cd909c5189a61 1027 SMART SM00487 290 525 6.8E-11 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_00570 eb3cfb170c9fc451ca4cd909c5189a61 1027 Gene3D G3DSA:3.40.50.300 294 453 2.7E-23 T 15-10-2018 D934_10915 812890b44e27a6b65f21aad080e4fe8b 264 SUPERFAMILY SSF55831 2 264 2.49E-126 T 15-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D934_10915 812890b44e27a6b65f21aad080e4fe8b 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 15-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D934_10915 812890b44e27a6b65f21aad080e4fe8b 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 39.794 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D934_10915 812890b44e27a6b65f21aad080e4fe8b 264 Gene3D G3DSA:3.30.572.10 1 264 1.0E-127 T 15-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D934_10915 812890b44e27a6b65f21aad080e4fe8b 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 4.6E-42 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D934_10915 812890b44e27a6b65f21aad080e4fe8b 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 7.3E-98 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D934_10915 812890b44e27a6b65f21aad080e4fe8b 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 5.6E-50 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D934_10915 812890b44e27a6b65f21aad080e4fe8b 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 5.6E-50 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D934_10915 812890b44e27a6b65f21aad080e4fe8b 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 5.6E-50 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D934_10915 812890b44e27a6b65f21aad080e4fe8b 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 5.6E-50 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D934_10915 812890b44e27a6b65f21aad080e4fe8b 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 5.6E-50 T 15-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D934_10915 812890b44e27a6b65f21aad080e4fe8b 264 Pfam PF00303 Thymidylate synthase 2 264 9.0E-121 T 15-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 SUPERFAMILY SSF51445 16 387 1.68E-98 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 269 286 - T 15-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 Pfam PF14310 Fibronectin type III-like domain 657 724 2.3E-18 T 15-10-2018 IPR026891 Fibronectin type III-like domain D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 388 620 3.9E-53 T 15-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 30 347 1.5E-68 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 SMART SM01217 657 726 4.6E-28 T 15-10-2018 IPR026891 Fibronectin type III-like domain D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 Gene3D G3DSA:3.20.20.300 18 369 2.4E-113 T 15-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 Gene3D G3DSA:3.40.50.1700 374 622 7.4E-77 T 15-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 SUPERFAMILY SSF52279 388 623 4.84E-53 T 15-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 162 178 6.7E-19 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 199 215 6.7E-19 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 116 135 6.7E-19 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 97 113 6.7E-19 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 269 287 6.7E-19 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D934_08170 39f59dfe7708fd5707d8261b5eb2ecdf 740 Gene3D G3DSA:2.60.40.10 623 737 2.1E-27 T 15-10-2018 IPR013783 Immunoglobulin-like fold D934_01345 68d7c213f2d7521f46c35fe244d6c30b 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 305 41.103 T 15-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 D934_01345 68d7c213f2d7521f46c35fe244d6c30b 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 11 296 1.4E-66 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 D934_01345 68d7c213f2d7521f46c35fe244d6c30b 306 PIRSF PIRSF026649 5 305 9.8E-87 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 D934_01345 68d7c213f2d7521f46c35fe244d6c30b 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 10 305 3.1E-116 T 15-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 D934_12360 f6edfacecb094126caceb6ecbe6ead98 93 Gene3D G3DSA:1.10.260.40 12 93 1.8E-25 T 15-10-2018 D934_12360 f6edfacecb094126caceb6ecbe6ead98 93 SUPERFAMILY SSF47413 20 91 8.44E-18 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_12360 f6edfacecb094126caceb6ecbe6ead98 93 SMART SM00530 33 89 0.0064 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_12360 f6edfacecb094126caceb6ecbe6ead98 93 Pfam PF13744 Helix-turn-helix domain 14 90 7.0E-27 T 15-10-2018 IPR039554 HigA2-like, helix-turn-helix domain D934_07420 4aef8752371b664fa1fdc43e54348bcc 519 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 9 513 39.487 T 15-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D934_07420 4aef8752371b664fa1fdc43e54348bcc 519 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D934_07420 4aef8752371b664fa1fdc43e54348bcc 519 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 206 219 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D934_07420 4aef8752371b664fa1fdc43e54348bcc 519 SMART SM00917 376 504 1.8E-26 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D934_07420 4aef8752371b664fa1fdc43e54348bcc 519 Pfam PF08502 LeuA allosteric (dimerisation) domain 377 504 5.4E-29 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D934_07420 4aef8752371b664fa1fdc43e54348bcc 519 SUPERFAMILY SSF51569 10 298 1.22E-93 T 15-10-2018 D934_07420 4aef8752371b664fa1fdc43e54348bcc 519 Pfam PF00682 HMGL-like 12 279 8.9E-89 T 15-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 D934_07420 4aef8752371b664fa1fdc43e54348bcc 519 Gene3D G3DSA:3.30.160.270 400 505 1.6E-10 T 15-10-2018 D934_07420 4aef8752371b664fa1fdc43e54348bcc 519 Gene3D G3DSA:3.20.20.70 10 283 3.1E-106 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_07420 4aef8752371b664fa1fdc43e54348bcc 519 Gene3D G3DSA:1.10.238.260 287 399 6.2E-35 T 15-10-2018 D934_07420 4aef8752371b664fa1fdc43e54348bcc 519 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 12 501 6.3E-193 T 15-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D934_07420 4aef8752371b664fa1fdc43e54348bcc 519 SUPERFAMILY SSF110921 402 503 3.14E-21 T 15-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 SUPERFAMILY SSF54211 487 613 2.38E-39 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_00170 2b15ad8edabc067e32f0efc99a963120 705 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.7E-16 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 Gene3D G3DSA:3.30.70.240 618 688 6.5E-83 T 15-10-2018 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 5.7E-32 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 SUPERFAMILY SSF54980 409 486 5.76E-26 T 15-10-2018 IPR035647 EF-G domain III/V-like D934_00170 2b15ad8edabc067e32f0efc99a963120 705 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 704 0.0 T 15-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 Gene3D G3DSA:3.40.50.300 1 298 3.9E-114 T 15-10-2018 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 Gene3D G3DSA:3.30.230.10 489 700 6.5E-83 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D934_00170 2b15ad8edabc067e32f0efc99a963120 705 Pfam PF00679 Elongation factor G C-terminus 614 700 2.2E-28 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like D934_00170 2b15ad8edabc067e32f0efc99a963120 705 Pfam PF03764 Elongation factor G, domain IV 484 612 4.2E-43 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 SUPERFAMILY SSF54980 617 704 2.35E-28 T 15-10-2018 IPR035647 EF-G domain III/V-like D934_00170 2b15ad8edabc067e32f0efc99a963120 705 Gene3D G3DSA:2.40.30.10 299 405 1.3E-44 T 15-10-2018 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 Hamap MF_00054_B Elongation factor G [fusA]. 6 705 109.223 T 15-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 Pfam PF03144 Elongation factor Tu domain 2 329 396 2.0E-17 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 SMART SM00838 614 701 2.2E-53 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like D934_00170 2b15ad8edabc067e32f0efc99a963120 705 SMART SM00889 485 612 1.1E-68 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 Pfam PF14492 Elongation Factor G, domain II 409 483 3.2E-35 T 15-10-2018 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 SUPERFAMILY SSF50447 255 407 7.73E-35 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D934_00170 2b15ad8edabc067e32f0efc99a963120 705 SUPERFAMILY SSF52540 6 288 3.2E-105 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00170 2b15ad8edabc067e32f0efc99a963120 705 Gene3D G3DSA:3.30.70.870 410 485 2.4E-34 T 15-10-2018 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 7.4E-65 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00170 2b15ad8edabc067e32f0efc99a963120 705 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site D934_05520 8716f48912d9d92a7745c66106fc3ac7 307 Gene3D G3DSA:3.40.50.170 1 205 8.1E-73 T 15-10-2018 D934_05520 8716f48912d9d92a7745c66106fc3ac7 307 Gene3D G3DSA:3.10.25.10 206 307 1.9E-28 T 15-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D934_05520 8716f48912d9d92a7745c66106fc3ac7 307 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 301 3.7E-89 T 15-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 D934_05520 8716f48912d9d92a7745c66106fc3ac7 307 SUPERFAMILY SSF53328 1 205 1.44E-61 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D934_05520 8716f48912d9d92a7745c66106fc3ac7 307 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 303 35.594 T 15-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 D934_05520 8716f48912d9d92a7745c66106fc3ac7 307 Pfam PF02911 Formyl transferase, C-terminal domain 203 299 2.4E-24 T 15-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D934_05520 8716f48912d9d92a7745c66106fc3ac7 307 Pfam PF00551 Formyl transferase 10 176 1.1E-43 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D934_05520 8716f48912d9d92a7745c66106fc3ac7 307 SUPERFAMILY SSF50486 205 301 6.67E-28 T 15-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 D934_05520 8716f48912d9d92a7745c66106fc3ac7 307 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 15-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D934_00205 b4b74542fb2c4777f2504495ddc22f8f 232 PIRSF PIRSF002155 1 227 6.6E-67 T 15-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_00205 b4b74542fb2c4777f2504495ddc22f8f 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 15-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_00205 b4b74542fb2c4777f2504495ddc22f8f 232 SUPERFAMILY SSF56808 6 226 1.83E-72 T 15-10-2018 IPR023674 Ribosomal protein L1-like D934_00205 b4b74542fb2c4777f2504495ddc22f8f 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 229 39.934 T 15-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 D934_00205 b4b74542fb2c4777f2504495ddc22f8f 232 Pfam PF00687 Ribosomal protein L1p/L10e family 29 220 2.0E-43 T 15-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein D934_00205 b4b74542fb2c4777f2504495ddc22f8f 232 Gene3D G3DSA:3.40.50.790 67 159 5.7E-74 T 15-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich D934_00205 b4b74542fb2c4777f2504495ddc22f8f 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.7E-98 T 15-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 D934_00205 b4b74542fb2c4777f2504495ddc22f8f 232 Gene3D G3DSA:3.30.190.20 20 225 5.7E-74 T 15-10-2018 D934_07595 8faedcb576dc34bfe7cb1457370f9ffc 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 13 41 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_07595 8faedcb576dc34bfe7cb1457370f9ffc 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 1 29 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_07595 8faedcb576dc34bfe7cb1457370f9ffc 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 3 31 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_07595 8faedcb576dc34bfe7cb1457370f9ffc 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 47 75 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_07595 8faedcb576dc34bfe7cb1457370f9ffc 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 83 111 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_07595 8faedcb576dc34bfe7cb1457370f9ffc 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 49 77 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_07595 8faedcb576dc34bfe7cb1457370f9ffc 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 5 33 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_07595 8faedcb576dc34bfe7cb1457370f9ffc 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 7 35 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_07595 8faedcb576dc34bfe7cb1457370f9ffc 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 85 113 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_07595 8faedcb576dc34bfe7cb1457370f9ffc 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 51 79 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_07595 8faedcb576dc34bfe7cb1457370f9ffc 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 43 71 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_07595 8faedcb576dc34bfe7cb1457370f9ffc 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 9 37 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_07595 8faedcb576dc34bfe7cb1457370f9ffc 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 45 73 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_07595 8faedcb576dc34bfe7cb1457370f9ffc 166 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 11 39 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_10815 5d793ce0d4baeb73484aa5f397d7f6f5 185 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 15-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 D934_10815 5d793ce0d4baeb73484aa5f397d7f6f5 185 Gene3D G3DSA:3.40.50.1390 1 125 3.0E-51 T 15-10-2018 D934_10815 5d793ce0d4baeb73484aa5f397d7f6f5 185 SUPERFAMILY SSF46689 138 181 1.03E-10 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D934_10815 5d793ce0d4baeb73484aa5f397d7f6f5 185 SMART SM00857 2 136 3.4E-56 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D934_10815 5d793ce0d4baeb73484aa5f397d7f6f5 185 Pfam PF02796 Helix-turn-helix domain of resolvase 138 179 7.2E-7 T 15-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 D934_10815 5d793ce0d4baeb73484aa5f397d7f6f5 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 15-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 D934_10815 5d793ce0d4baeb73484aa5f397d7f6f5 185 Pfam PF00239 Resolvase, N terminal domain 3 135 2.9E-45 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D934_10815 5d793ce0d4baeb73484aa5f397d7f6f5 185 Gene3D G3DSA:1.10.10.60 138 184 2.9E-7 T 15-10-2018 D934_10815 5d793ce0d4baeb73484aa5f397d7f6f5 185 SUPERFAMILY SSF53041 1 135 4.19E-44 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 D934_10515 01953c3751799b156eddae554a2ddb34 275 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 271 1.7E-71 T 15-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 D934_10515 01953c3751799b156eddae554a2ddb34 275 Gene3D G3DSA:3.40.50.150 83 272 2.0E-59 T 15-10-2018 D934_10515 01953c3751799b156eddae554a2ddb34 275 Pfam PF05175 Methyltransferase small domain 99 186 3.0E-18 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 D934_10515 01953c3751799b156eddae554a2ddb34 275 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 19 268 5.8E-87 T 15-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 D934_10515 01953c3751799b156eddae554a2ddb34 275 Gene3D G3DSA:1.10.8.10 5 80 3.5E-18 T 15-10-2018 D934_10515 01953c3751799b156eddae554a2ddb34 275 SUPERFAMILY SSF53335 14 270 3.04E-55 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_10515 01953c3751799b156eddae554a2ddb34 275 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 272 42.862 T 15-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 D934_10515 01953c3751799b156eddae554a2ddb34 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 177 183 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D934_01045 2d52724c1060ff6562127a3533104847 139 SUPERFAMILY SSF54523 18 133 1.78E-27 T 15-10-2018 D934_01045 2d52724c1060ff6562127a3533104847 139 PRINTS PR00885 Bacterial general secretion pathway protein H signature 13 27 1.4E-5 T 15-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 D934_01045 2d52724c1060ff6562127a3533104847 139 PRINTS PR00885 Bacterial general secretion pathway protein H signature 28 42 1.4E-5 T 15-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 D934_01045 2d52724c1060ff6562127a3533104847 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 38 3.4E-11 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_01045 2d52724c1060ff6562127a3533104847 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 38 1.3E-9 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_01045 2d52724c1060ff6562127a3533104847 139 Gene3D G3DSA:3.30.700.10 18 138 3.7E-23 T 15-10-2018 D934_01045 2d52724c1060ff6562127a3533104847 139 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 40 124 4.3E-25 T 15-10-2018 IPR031982 Type IV minor pilin ComP D934_12485 b7a2b16a1e11ab2638c6c440b6fb9335 572 Gene3D G3DSA:3.40.50.720 424 563 5.4E-30 T 15-10-2018 D934_12485 b7a2b16a1e11ab2638c6c440b6fb9335 572 SUPERFAMILY SSF51735 426 557 4.62E-27 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_12485 b7a2b16a1e11ab2638c6c440b6fb9335 572 Pfam PF02254 TrkA-N domain 429 542 3.6E-22 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 D934_12485 b7a2b16a1e11ab2638c6c440b6fb9335 572 Pfam PF00999 Sodium/hydrogen exchanger family 12 395 4.2E-83 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 D934_12485 b7a2b16a1e11ab2638c6c440b6fb9335 572 Gene3D G3DSA:1.20.1530.20 5 409 5.3E-80 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily D934_02455 fc30999dba474887a4ca669ef16e3301 603 SUPERFAMILY SSF56235 37 570 9.26E-168 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D934_02455 fc30999dba474887a4ca669ef16e3301 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 402 420 8.7E-67 T 15-10-2018 D934_02455 fc30999dba474887a4ca669ef16e3301 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 135 153 8.7E-67 T 15-10-2018 D934_02455 fc30999dba474887a4ca669ef16e3301 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 281 300 8.7E-67 T 15-10-2018 D934_02455 fc30999dba474887a4ca669ef16e3301 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 251 267 8.7E-67 T 15-10-2018 D934_02455 fc30999dba474887a4ca669ef16e3301 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 443 458 8.7E-67 T 15-10-2018 D934_02455 fc30999dba474887a4ca669ef16e3301 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 61 86 8.7E-67 T 15-10-2018 D934_02455 fc30999dba474887a4ca669ef16e3301 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 378 396 8.7E-67 T 15-10-2018 D934_02455 fc30999dba474887a4ca669ef16e3301 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 466 483 8.7E-67 T 15-10-2018 D934_02455 fc30999dba474887a4ca669ef16e3301 603 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 153 172 8.7E-67 T 15-10-2018 D934_02455 fc30999dba474887a4ca669ef16e3301 603 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 40 569 8.7E-139 T 15-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 D934_02455 fc30999dba474887a4ca669ef16e3301 603 Gene3D G3DSA:1.10.246.130 267 377 1.2E-34 T 15-10-2018 D934_02455 fc30999dba474887a4ca669ef16e3301 603 Pfam PF01019 Gamma-glutamyltranspeptidase 54 570 3.6E-168 T 15-10-2018 D934_02455 fc30999dba474887a4ca669ef16e3301 603 Gene3D G3DSA:3.60.20.40 378 571 2.5E-56 T 15-10-2018 D934_12520 dee5285be2bd713d6a67b41655d3df9c 297 Gene3D G3DSA:3.40.50.150 37 230 6.2E-65 T 15-10-2018 D934_12520 dee5285be2bd713d6a67b41655d3df9c 297 SMART SM00650 56 229 5.8E-85 T 15-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 D934_12520 dee5285be2bd713d6a67b41655d3df9c 297 Gene3D G3DSA:1.10.8.100 233 297 6.6E-21 T 15-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 D934_12520 dee5285be2bd713d6a67b41655d3df9c 297 SUPERFAMILY SSF53335 48 294 1.4E-77 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_12520 dee5285be2bd713d6a67b41655d3df9c 297 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 40 296 53.564 T 15-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 D934_12520 dee5285be2bd713d6a67b41655d3df9c 297 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 72 99 - T 15-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 D934_12520 dee5285be2bd713d6a67b41655d3df9c 297 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 42 294 3.8E-83 T 15-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 D934_12520 dee5285be2bd713d6a67b41655d3df9c 297 Pfam PF00398 Ribosomal RNA adenine dimethylase 42 294 5.5E-67 T 15-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm D934_05080 eb2df50f9575119a5ff36b3dfa1087ab 95 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 19 93 1.8E-14 T 15-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative D934_02915 eb2df50f9575119a5ff36b3dfa1087ab 95 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 19 93 1.8E-14 T 15-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative D934_03815 c74f3aa572c1a9189fa732f780e49cf0 193 Hamap MF_00045 Oligoribonuclease [orn]. 9 187 39.408 T 15-10-2018 IPR022894 Oligoribonuclease GO:0000175 D934_03815 c74f3aa572c1a9189fa732f780e49cf0 193 Pfam PF00929 Exonuclease 15 176 3.0E-26 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D934_03815 c74f3aa572c1a9189fa732f780e49cf0 193 SUPERFAMILY SSF53098 10 183 3.31E-43 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_03815 c74f3aa572c1a9189fa732f780e49cf0 193 SMART SM00479 13 186 2.4E-7 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D934_03815 c74f3aa572c1a9189fa732f780e49cf0 193 Gene3D G3DSA:3.30.420.10 7 190 1.1E-67 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D934_07010 d2ea7a15373866eb312b32c600b3dd52 188 Gene3D G3DSA:2.40.50.140 1 172 1.2E-48 T 15-10-2018 D934_07010 d2ea7a15373866eb312b32c600b3dd52 188 Pfam PF10991 Protein of unknown function (DUF2815) 2 173 4.1E-48 T 15-10-2018 IPR022595 Protein of unknown function DUF2815 D934_07010 d2ea7a15373866eb312b32c600b3dd52 188 SUPERFAMILY SSF50249 6 169 5.48E-11 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_11900 f45e7546f04e5b2929813d6bbdb17dc6 326 Pfam PF02424 ApbE family 16 294 1.0E-76 T 15-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 D934_11900 f45e7546f04e5b2929813d6bbdb17dc6 326 Gene3D G3DSA:3.10.520.20 4 324 7.7E-97 T 15-10-2018 D934_11900 f45e7546f04e5b2929813d6bbdb17dc6 326 PIRSF PIRSF006268 1 321 7.2E-77 T 15-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 D934_11900 f45e7546f04e5b2929813d6bbdb17dc6 326 SUPERFAMILY SSF143631 10 320 3.14E-88 T 15-10-2018 IPR003374 ApbE-like superfamily D934_09500 22c1c562c8f0782f8a74f3f9bbb40051 349 Gene3D G3DSA:1.10.340.30 20 131 8.1E-80 T 15-10-2018 D934_09500 22c1c562c8f0782f8a74f3f9bbb40051 349 Pfam PF14815 NUDIX domain 236 347 1.1E-20 T 15-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 D934_09500 22c1c562c8f0782f8a74f3f9bbb40051 349 Gene3D G3DSA:1.10.1670.10 8 212 8.1E-80 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 D934_09500 22c1c562c8f0782f8a74f3f9bbb40051 349 SMART SM00525 193 213 0.0044 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 D934_09500 22c1c562c8f0782f8a74f3f9bbb40051 349 SUPERFAMILY SSF48150 2 226 3.14E-71 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 D934_09500 22c1c562c8f0782f8a74f3f9bbb40051 349 Pfam PF00633 Helix-hairpin-helix motif 99 126 1.3E-5 T 15-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 D934_09500 22c1c562c8f0782f8a74f3f9bbb40051 349 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 194 210 - T 15-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 D934_09500 22c1c562c8f0782f8a74f3f9bbb40051 349 SUPERFAMILY SSF55811 222 348 2.12E-22 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D934_09500 22c1c562c8f0782f8a74f3f9bbb40051 349 SMART SM00478 38 192 1.8E-42 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 D934_09500 22c1c562c8f0782f8a74f3f9bbb40051 349 Gene3D G3DSA:3.90.79.10 234 349 5.0E-15 T 15-10-2018 D934_09500 22c1c562c8f0782f8a74f3f9bbb40051 349 ProSitePatterns PS01155 Endonuclease III family signature. 101 130 - T 15-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 D934_09500 22c1c562c8f0782f8a74f3f9bbb40051 349 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 280 7.2E-104 T 15-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 D934_09500 22c1c562c8f0782f8a74f3f9bbb40051 349 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 4.9E-19 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 D934_10100 b7fe7a3b0c668f2f93f348eee4808ae1 205 Gene3D G3DSA:1.10.357.10 12 204 1.1E-26 T 15-10-2018 D934_10100 b7fe7a3b0c668f2f93f348eee4808ae1 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 2.8E-13 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D934_10100 b7fe7a3b0c668f2f93f348eee4808ae1 205 SUPERFAMILY SSF48498 90 204 8.15E-7 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D934_10100 b7fe7a3b0c668f2f93f348eee4808ae1 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 6.5E-6 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D934_10100 b7fe7a3b0c668f2f93f348eee4808ae1 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 6.5E-6 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D934_10100 b7fe7a3b0c668f2f93f348eee4808ae1 205 SUPERFAMILY SSF46689 12 95 3.15E-17 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 SUPERFAMILY SSF82693 136 322 5.55E-15 T 15-10-2018 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 Gene3D G3DSA:3.30.70.1430 556 657 2.2E-233 T 15-10-2018 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 Gene3D G3DSA:1.20.1640.10 505 1009 2.2E-233 T 15-10-2018 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 Gene3D G3DSA:3.30.2090.10 709 798 2.2E-233 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 Gene3D G3DSA:3.30.2090.10 177 270 2.2E-233 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 SUPERFAMILY SSF82714 182 264 6.8E-11 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 SUPERFAMILY SSF82693 42 132 6.28E-14 T 15-10-2018 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 SUPERFAMILY SSF82714 710 796 2.75E-11 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 Gene3D G3DSA:3.30.70.1430 40 806 2.2E-233 T 15-10-2018 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 4.3E-25 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 4.3E-25 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 4.3E-25 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 4.3E-25 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.3E-25 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 4.3E-25 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.3E-25 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 Gene3D G3DSA:3.30.70.1320 134 328 2.2E-233 T 15-10-2018 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 SUPERFAMILY SSF82866 292 491 4.19E-39 T 15-10-2018 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 Pfam PF00873 AcrB/AcrD/AcrF family 12 1011 5.9E-156 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 Gene3D G3DSA:3.30.70.1440 658 855 2.2E-233 T 15-10-2018 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 Gene3D G3DSA:1.20.1640.10 13 504 2.2E-233 T 15-10-2018 D934_02005 a6c4b8fdbe1549ec6ff192b424dcd24e 1027 SUPERFAMILY SSF82866 796 1017 3.14E-47 T 15-10-2018 D934_03490 bbadb87007558ced5d826d8eba1e4392 431 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 260 413 1.0E-33 T 15-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 D934_03490 bbadb87007558ced5d826d8eba1e4392 431 Gene3D G3DSA:3.10.50.40 147 243 3.9E-60 T 15-10-2018 D934_03490 bbadb87007558ced5d826d8eba1e4392 431 Pfam PF05697 Bacterial trigger factor protein (TF) 1 141 2.2E-32 T 15-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 D934_03490 bbadb87007558ced5d826d8eba1e4392 431 TIGRFAM TIGR00115 tig: trigger factor 11 412 8.7E-94 T 15-10-2018 IPR005215 Trigger factor GO:0015031 D934_03490 bbadb87007558ced5d826d8eba1e4392 431 Gene3D G3DSA:3.30.70.1050 1 111 4.5E-29 T 15-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 D934_03490 bbadb87007558ced5d826d8eba1e4392 431 Hamap MF_00303 Trigger factor [tig]. 1 420 16.732 T 15-10-2018 IPR005215 Trigger factor GO:0015031 D934_03490 bbadb87007558ced5d826d8eba1e4392 431 SUPERFAMILY SSF54534 129 242 7.07E-13 T 15-10-2018 D934_03490 bbadb87007558ced5d826d8eba1e4392 431 PIRSF PIRSF003095 1 431 3.7E-98 T 15-10-2018 IPR005215 Trigger factor GO:0015031 D934_03490 bbadb87007558ced5d826d8eba1e4392 431 SUPERFAMILY SSF102735 1 123 2.35E-28 T 15-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 D934_03490 bbadb87007558ced5d826d8eba1e4392 431 SUPERFAMILY SSF109998 245 429 2.16E-33 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily D934_03490 bbadb87007558ced5d826d8eba1e4392 431 Gene3D G3DSA:1.10.3120.10 112 417 3.9E-60 T 15-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 D934_10220 e200e7196b07605929d47ad8ad40ea71 186 Pfam PF02698 DUF218 domain 29 173 1.3E-28 T 15-10-2018 IPR003848 Domain of unknown function DUF218 D934_07435 e0d9ca953ab7ccfdde8d9c0eb8d3e185 583 Gene3D G3DSA:3.40.50.1220 191 363 1.6E-50 T 15-10-2018 D934_07435 e0d9ca953ab7ccfdde8d9c0eb8d3e185 583 SUPERFAMILY SSF52518 8 178 1.13E-59 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold D934_07435 e0d9ca953ab7ccfdde8d9c0eb8d3e185 583 SUPERFAMILY SSF52518 377 571 9.83E-64 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold D934_07435 e0d9ca953ab7ccfdde8d9c0eb8d3e185 583 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 568 1.4E-207 T 15-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 D934_07435 e0d9ca953ab7ccfdde8d9c0eb8d3e185 583 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 332 3.7E-41 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 D934_07435 e0d9ca953ab7ccfdde8d9c0eb8d3e185 583 SUPERFAMILY SSF52467 193 363 1.64E-53 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily D934_07435 e0d9ca953ab7ccfdde8d9c0eb8d3e185 583 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 544 1.6E-47 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 D934_07435 e0d9ca953ab7ccfdde8d9c0eb8d3e185 583 Gene3D G3DSA:3.40.50.970 2 185 5.1E-68 T 15-10-2018 D934_07435 e0d9ca953ab7ccfdde8d9c0eb8d3e185 583 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 175 4.0E-57 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 D934_07435 e0d9ca953ab7ccfdde8d9c0eb8d3e185 583 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 D934_07435 e0d9ca953ab7ccfdde8d9c0eb8d3e185 583 Gene3D G3DSA:3.40.50.970 367 579 1.5E-65 T 15-10-2018 D934_06380 2ae5e44daebf489cbc014965737ab45c 115 SUPERFAMILY SSF143011 23 115 1.44E-15 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D934_06380 2ae5e44daebf489cbc014965737ab45c 115 Gene3D G3DSA:3.30.2310.20 22 115 1.5E-35 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D934_06380 2ae5e44daebf489cbc014965737ab45c 115 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 25 115 4.5E-32 T 15-10-2018 IPR007711 Toxin HigB-1 D934_10885 6017627e05280e91507c230c1132a452 362 SUPERFAMILY SSF53383 3 360 1.31E-106 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D934_10885 6017627e05280e91507c230c1132a452 362 Gene3D G3DSA:3.40.640.10 18 256 3.2E-81 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D934_10885 6017627e05280e91507c230c1132a452 362 Pfam PF00266 Aminotransferase class-V 5 350 8.1E-51 T 15-10-2018 IPR000192 Aminotransferase class V domain D934_10885 6017627e05280e91507c230c1132a452 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 3 361 46.892 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 D934_10885 6017627e05280e91507c230c1132a452 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 361 2.8E-156 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 D934_10885 6017627e05280e91507c230c1132a452 362 PIRSF PIRSF000525 1 362 3.1E-145 T 15-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 D934_10885 6017627e05280e91507c230c1132a452 362 Gene3D G3DSA:3.90.1150.10 258 362 2.1E-38 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D934_10545 fcf8808b3764d9f50009b87caa43081a 241 SUPERFAMILY SSF54211 5 184 7.09E-43 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_10545 fcf8808b3764d9f50009b87caa43081a 241 Pfam PF01138 3' exoribonuclease family, domain 1 14 143 3.8E-20 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D934_10545 fcf8808b3764d9f50009b87caa43081a 241 Gene3D G3DSA:3.30.230.70 13 241 3.9E-57 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D934_10545 fcf8808b3764d9f50009b87caa43081a 241 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 5 239 5.3E-112 T 15-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 D934_10545 fcf8808b3764d9f50009b87caa43081a 241 SUPERFAMILY SSF55666 156 240 1.96E-23 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D934_10545 fcf8808b3764d9f50009b87caa43081a 241 Hamap MF_00564 Ribonuclease PH [rph]. 14 240 44.167 T 15-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 D934_10545 fcf8808b3764d9f50009b87caa43081a 241 Pfam PF03725 3' exoribonuclease family, domain 2 161 226 1.9E-6 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D934_10545 fcf8808b3764d9f50009b87caa43081a 241 ProSitePatterns PS01277 Ribonuclease PH signature. 119 132 - T 15-10-2018 IPR018336 Ribonuclease PH, conserved site D934_04475 3d324c8073635273876b3c669be50a61 197 Pfam PF02498 BRO family, N-terminal domain 17 103 2.5E-6 T 15-10-2018 IPR003497 BRO N-terminal domain D934_04475 3d324c8073635273876b3c669be50a61 197 SMART SM01040 14 106 8.4E-13 T 15-10-2018 IPR003497 BRO N-terminal domain D934_11540 b491d307a61234f92cdacd0fd9f34812 188 SUPERFAMILY SSF50249 69 128 1.76E-16 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_11540 b491d307a61234f92cdacd0fd9f34812 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 15-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site D934_11540 b491d307a61234f92cdacd0fd9f34812 188 SMART SM00841 131 186 1.1E-33 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 D934_11540 b491d307a61234f92cdacd0fd9f34812 188 SMART SM01185 69 123 4.3E-21 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 D934_11540 b491d307a61234f92cdacd0fd9f34812 188 SUPERFAMILY SSF50249 130 187 2.57E-18 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_11540 b491d307a61234f92cdacd0fd9f34812 188 PIRSF PIRSF005901 2 188 1.0E-62 T 15-10-2018 IPR020599 Translation elongation factor P/YeiP D934_11540 b491d307a61234f92cdacd0fd9f34812 188 Gene3D G3DSA:2.40.50.140 130 188 2.7E-28 T 15-10-2018 D934_11540 b491d307a61234f92cdacd0fd9f34812 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 2.9E-21 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 D934_11540 b491d307a61234f92cdacd0fd9f34812 188 Gene3D G3DSA:2.40.50.140 66 127 3.9E-29 T 15-10-2018 D934_11540 b491d307a61234f92cdacd0fd9f34812 188 Gene3D G3DSA:2.30.30.30 1 65 3.1E-19 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 D934_11540 b491d307a61234f92cdacd0fd9f34812 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 47.46 T 15-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 D934_11540 b491d307a61234f92cdacd0fd9f34812 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 62 5.1E-19 T 15-10-2018 IPR013185 Translation elongation factor, KOW-like D934_11540 b491d307a61234f92cdacd0fd9f34812 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 2.9E-26 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 D934_11540 b491d307a61234f92cdacd0fd9f34812 188 SUPERFAMILY SSF50104 5 64 2.11E-15 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily D934_11540 b491d307a61234f92cdacd0fd9f34812 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 5.3E-73 T 15-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 D934_01505 8004b383d5f47305ee5968eedb915178 491 Gene3D G3DSA:3.40.220.10 3 163 1.7E-44 T 15-10-2018 D934_01505 8004b383d5f47305ee5968eedb915178 491 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 183 483 2.1E-118 T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D934_01505 8004b383d5f47305ee5968eedb915178 491 SUPERFAMILY SSF52949 3 181 6.47E-42 T 15-10-2018 D934_01505 8004b383d5f47305ee5968eedb915178 491 Gene3D G3DSA:3.40.630.10 176 491 5.9E-139 T 15-10-2018 D934_01505 8004b383d5f47305ee5968eedb915178 491 SUPERFAMILY SSF53187 176 489 1.19E-119 T 15-10-2018 D934_01505 8004b383d5f47305ee5968eedb915178 491 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 5 490 34.969 T 15-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 D934_01505 8004b383d5f47305ee5968eedb915178 491 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 21 144 1.4E-31 T 15-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D934_01505 8004b383d5f47305ee5968eedb915178 491 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 344 351 - T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D934_01505 8004b383d5f47305ee5968eedb915178 491 PRINTS PR00481 Cytosol aminopeptidase signature 259 276 3.0E-51 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D934_01505 8004b383d5f47305ee5968eedb915178 491 PRINTS PR00481 Cytosol aminopeptidase signature 368 383 3.0E-51 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D934_01505 8004b383d5f47305ee5968eedb915178 491 PRINTS PR00481 Cytosol aminopeptidase signature 318 339 3.0E-51 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D934_01505 8004b383d5f47305ee5968eedb915178 491 PRINTS PR00481 Cytosol aminopeptidase signature 340 360 3.0E-51 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D934_01505 8004b383d5f47305ee5968eedb915178 491 PRINTS PR00481 Cytosol aminopeptidase signature 281 302 3.0E-51 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D934_09535 a5588ede2fc2ad8b67a734125cdbce83 498 Gene3D G3DSA:3.60.120.10 8 491 4.6E-117 T 15-10-2018 IPR005801 ADC synthase GO:0009058 D934_09535 a5588ede2fc2ad8b67a734125cdbce83 498 PRINTS PR00095 Anthranilate synthase component I signature 338 351 6.4E-14 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_09535 a5588ede2fc2ad8b67a734125cdbce83 498 PRINTS PR00095 Anthranilate synthase component I signature 434 448 6.4E-14 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_09535 a5588ede2fc2ad8b67a734125cdbce83 498 PRINTS PR00095 Anthranilate synthase component I signature 418 432 6.4E-14 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_09535 a5588ede2fc2ad8b67a734125cdbce83 498 PRINTS PR00095 Anthranilate synthase component I signature 324 337 6.4E-14 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_09535 a5588ede2fc2ad8b67a734125cdbce83 498 SUPERFAMILY SSF56322 20 485 2.09E-113 T 15-10-2018 IPR005801 ADC synthase GO:0009058 D934_09535 a5588ede2fc2ad8b67a734125cdbce83 498 Pfam PF04715 Anthranilate synthase component I, N terminal region 30 179 9.6E-12 T 15-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_09535 a5588ede2fc2ad8b67a734125cdbce83 498 Pfam PF00425 chorismate binding enzyme 223 477 1.7E-79 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 15-10-2018 IPR014762 DNA mismatch repair, conserved site D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 SUPERFAMILY SSF118116 430 619 7.19E-58 T 15-10-2018 IPR037198 MutL, C-terminal domain superfamily D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 SMART SM01340 209 327 1.1E-58 T 15-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 Gene3D G3DSA:3.30.565.10 1 202 2.8E-65 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 SMART SM00853 434 577 2.8E-54 T 15-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 SUPERFAMILY SSF54211 190 327 9.86E-38 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 Pfam PF08676 MutL C terminal dimerisation domain 430 577 1.0E-48 T 15-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 Gene3D G3DSA:3.30.1370.100 477 572 5.4E-57 T 15-10-2018 D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 119 5.0E-11 T 15-10-2018 D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 617 29.005 T 15-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 SUPERFAMILY SSF55874 1 204 7.99E-53 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 210 326 1.8E-40 T 15-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 307 3.2E-96 T 15-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 Gene3D G3DSA:3.30.230.10 214 326 4.8E-39 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D934_13330 d0ccbba8b616f81920d8fe6a5b7f88bf 621 Gene3D G3DSA:2.30.42.20 436 614 5.4E-57 T 15-10-2018 D934_02605 7f498239fd11d3fe64a69b2567c55cd2 164 SUPERFAMILY SSF47979 103 158 9.03E-13 T 15-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 D934_02605 7f498239fd11d3fe64a69b2567c55cd2 164 SMART SM00529 64 163 1.2E-30 T 15-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 D934_02605 7f498239fd11d3fe64a69b2567c55cd2 164 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 46 99 1.3E-11 T 15-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 D934_02605 7f498239fd11d3fe64a69b2567c55cd2 164 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 103 159 3.0E-11 T 15-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 D934_02605 7f498239fd11d3fe64a69b2567c55cd2 164 SUPERFAMILY SSF46785 45 102 2.5E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_02605 7f498239fd11d3fe64a69b2567c55cd2 164 Gene3D G3DSA:1.10.60.10 103 162 2.4E-22 T 15-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 D934_02605 7f498239fd11d3fe64a69b2567c55cd2 164 Gene3D G3DSA:1.10.10.10 32 102 5.1E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_01365 7afc178bf5ed48e1938e9abfd562f251 170 Pfam PF01782 RimM N-terminal domain 10 92 1.4E-21 T 15-10-2018 IPR002676 RimM, N-terminal GO:0006364 D934_01365 7afc178bf5ed48e1938e9abfd562f251 170 Gene3D G3DSA:2.30.30.240 97 170 1.4E-26 T 15-10-2018 D934_01365 7afc178bf5ed48e1938e9abfd562f251 170 SUPERFAMILY SSF50447 8 95 9.89E-19 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D934_01365 7afc178bf5ed48e1938e9abfd562f251 170 Gene3D G3DSA:2.40.30.60 1 95 3.6E-24 T 15-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 D934_01365 7afc178bf5ed48e1938e9abfd562f251 170 SUPERFAMILY SSF50346 101 170 4.12E-18 T 15-10-2018 IPR011033 PRC-barrel-like superfamily D934_01365 7afc178bf5ed48e1938e9abfd562f251 170 Pfam PF05239 PRC-barrel domain 98 165 5.7E-6 T 15-10-2018 IPR027275 PRC-barrel domain D934_01365 7afc178bf5ed48e1938e9abfd562f251 170 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 169 5.3E-48 T 15-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 D934_01365 7afc178bf5ed48e1938e9abfd562f251 170 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 170 24.001 T 15-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 D934_09625 be8849c11331d7a31cae515c0303a2f8 264 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 3 256 3.1E-76 T 15-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 D934_09625 be8849c11331d7a31cae515c0303a2f8 264 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 3 256 8.5E-80 T 15-10-2018 D934_09625 be8849c11331d7a31cae515c0303a2f8 264 Gene3D G3DSA:3.60.10.10 3 257 1.4E-69 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D934_09625 be8849c11331d7a31cae515c0303a2f8 264 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 213 224 - T 15-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 D934_09625 be8849c11331d7a31cae515c0303a2f8 264 SUPERFAMILY SSF56219 3 257 1.44E-77 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D934_09625 be8849c11331d7a31cae515c0303a2f8 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 249 3.9E-21 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase D934_09625 be8849c11331d7a31cae515c0303a2f8 264 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 15-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 D934_04620 5e4ab8fcf22d76de454e83e775a0581d 319 Gene3D G3DSA:1.10.287.90 28 113 1.8E-33 T 15-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04620 5e4ab8fcf22d76de454e83e775a0581d 319 SUPERFAMILY SSF81464 30 117 1.34E-22 T 15-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04620 5e4ab8fcf22d76de454e83e775a0581d 319 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 16 240 6.0E-113 T 15-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 D934_04620 5e4ab8fcf22d76de454e83e775a0581d 319 SUPERFAMILY SSF49503 121 285 4.77E-49 T 15-10-2018 IPR008972 Cupredoxin D934_04620 5e4ab8fcf22d76de454e83e775a0581d 319 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 224 4.1E-8 T 15-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04620 5e4ab8fcf22d76de454e83e775a0581d 319 Pfam PF06481 COX Aromatic Rich Motif 240 288 1.2E-15 T 15-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 D934_04620 5e4ab8fcf22d76de454e83e775a0581d 319 PIRSF PIRSF000292 2 315 3.8E-135 T 15-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 D934_04620 5e4ab8fcf22d76de454e83e775a0581d 319 Gene3D G3DSA:2.60.40.420 114 285 3.0E-57 T 15-10-2018 IPR008972 Cupredoxin D934_00270 2298d9499de2df455fa25cf4361ec159 322 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 135 150 - T 15-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 D934_00270 2298d9499de2df455fa25cf4361ec159 322 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 11 320 6.2E-116 T 15-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 D934_00270 2298d9499de2df455fa25cf4361ec159 322 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 10 321 47.857 T 15-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 D934_00270 2298d9499de2df455fa25cf4361ec159 322 SMART SM01400 10 127 6.3E-66 T 15-10-2018 D934_00270 2298d9499de2df455fa25cf4361ec159 322 Gene3D G3DSA:3.40.50.2020 154 297 7.3E-126 T 15-10-2018 D934_00270 2298d9499de2df455fa25cf4361ec159 322 Pfam PF14572 Phosphoribosyl synthetase-associated domain 211 320 7.3E-29 T 15-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 D934_00270 2298d9499de2df455fa25cf4361ec159 322 SUPERFAMILY SSF53271 75 310 5.35E-60 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like D934_00270 2298d9499de2df455fa25cf4361ec159 322 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 127 1.5E-44 T 15-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 D934_00270 2298d9499de2df455fa25cf4361ec159 322 Gene3D G3DSA:3.40.50.2020 13 309 7.3E-126 T 15-10-2018 D934_11560 71290918a64b5cb204f53b3ff9ecc73f 226 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 213 26.44 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 D934_11560 71290918a64b5cb204f53b3ff9ecc73f 226 SUPERFAMILY SSF52540 6 213 4.61E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_11560 71290918a64b5cb204f53b3ff9ecc73f 226 Gene3D G3DSA:3.40.50.300 5 216 6.4E-63 T 15-10-2018 D934_11560 71290918a64b5cb204f53b3ff9ecc73f 226 PIRSF PIRSF006755 2 224 8.5E-80 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 D934_11560 71290918a64b5cb204f53b3ff9ecc73f 226 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 177 1.5E-44 T 15-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 D934_11560 71290918a64b5cb204f53b3ff9ecc73f 226 Pfam PF13500 AAA domain 6 210 3.2E-36 T 15-10-2018 D934_00925 cd4b86c07e686344f705dc09004ed2be 364 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 336 9.6E-17 T 15-10-2018 IPR003395 RecF/RecN/SMC, N-terminal D934_00925 cd4b86c07e686344f705dc09004ed2be 364 ProSitePatterns PS00617 RecF protein signature 1. 120 140 - T 15-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 D934_00925 cd4b86c07e686344f705dc09004ed2be 364 SUPERFAMILY SSF52540 1 335 1.0E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00925 cd4b86c07e686344f705dc09004ed2be 364 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 340 2.0E-76 T 15-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 D934_00925 cd4b86c07e686344f705dc09004ed2be 364 Gene3D G3DSA:3.40.50.300 7 338 9.7E-74 T 15-10-2018 D934_00925 cd4b86c07e686344f705dc09004ed2be 364 ProSitePatterns PS00618 RecF protein signature 2. 303 321 - T 15-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 D934_00925 cd4b86c07e686344f705dc09004ed2be 364 Gene3D G3DSA:1.20.1050.90 123 302 9.7E-74 T 15-10-2018 D934_00925 cd4b86c07e686344f705dc09004ed2be 364 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 364 79.468 T 15-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 Gene3D G3DSA:3.30.300.20 282 351 1.5E-24 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta D934_01965 44e9aee9d071a78ba0035c75047df31b 503 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 4.0E-124 T 15-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 SUPERFAMILY SSF50249 135 203 4.18E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_01965 44e9aee9d071a78ba0035c75047df31b 503 Pfam PF08529 NusA N-terminal domain 4 128 4.2E-34 T 15-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 Pfam PF13184 NusA-like KH domain 234 301 1.1E-27 T 15-10-2018 IPR025249 KH domain, NusA-like GO:0003723 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 Gene3D G3DSA:3.30.1480.10 1 133 4.9E-39 T 15-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 SUPERFAMILY SSF47794 361 419 2.2E-15 T 15-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 Pfam PF14520 Helix-hairpin-helix domain 437 492 1.7E-4 T 15-10-2018 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 SUPERFAMILY SSF54814 283 346 1.83E-14 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 5.5E-22 T 15-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication D934_01965 44e9aee9d071a78ba0035c75047df31b 503 Gene3D G3DSA:3.30.300.20 203 281 7.5E-30 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta D934_01965 44e9aee9d071a78ba0035c75047df31b 503 Gene3D G3DSA:1.10.150.20 356 425 2.6E-27 T 15-10-2018 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 SUPERFAMILY SSF47794 434 493 2.35E-7 T 15-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 Gene3D G3DSA:2.40.50.140 139 202 1.8E-20 T 15-10-2018 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 428 29.309 T 15-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 SUPERFAMILY SSF69705 1 130 1.18E-35 T 15-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 Pfam PF00575 S1 RNA binding domain 137 199 4.6E-9 T 15-10-2018 IPR003029 S1 domain GO:0003676 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 SUPERFAMILY SSF54814 205 282 1.63E-29 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 SMART SM00322 305 367 0.036 T 15-10-2018 IPR004087 K Homology domain GO:0003676 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 SMART SM00322 234 297 18.0 T 15-10-2018 IPR004087 K Homology domain GO:0003676 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 Gene3D G3DSA:1.10.150.20 435 494 1.5E-15 T 15-10-2018 D934_01965 44e9aee9d071a78ba0035c75047df31b 503 SMART SM00316 137 204 1.6E-9 T 15-10-2018 IPR022967 RNA-binding domain, S1 D934_08800 98bbd8980b3862fc0afc6e4a3f228b48 220 Pfam PF05137 Fimbrial assembly protein (PilN) 100 184 3.1E-27 T 15-10-2018 IPR007813 Fimbrial assembly PilN D934_04990 a73532efbf699a8a04c614ca447b20b9 416 Gene3D G3DSA:3.40.640.10 47 306 5.5E-159 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D934_04990 a73532efbf699a8a04c614ca447b20b9 416 Pfam PF00266 Aminotransferase class-V 36 404 2.9E-145 T 15-10-2018 IPR000192 Aminotransferase class V domain D934_04990 a73532efbf699a8a04c614ca447b20b9 416 PIRSF PIRSF005572 33 414 8.8E-49 T 15-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 D934_04990 a73532efbf699a8a04c614ca447b20b9 416 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 18 415 4.3E-174 T 15-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 D934_04990 a73532efbf699a8a04c614ca447b20b9 416 SUPERFAMILY SSF53383 15 413 1.58E-121 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D934_04990 a73532efbf699a8a04c614ca447b20b9 416 Gene3D G3DSA:3.90.1150.10 20 408 5.5E-159 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D934_04990 a73532efbf699a8a04c614ca447b20b9 416 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 227 246 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site D934_02310 7f3a08680c08b6fe4888fe2141be446a 249 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 34 200 1.3E-39 T 15-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02310 7f3a08680c08b6fe4888fe2141be446a 249 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 132 187 3.0E-26 T 15-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02310 7f3a08680c08b6fe4888fe2141be446a 249 SUPERFAMILY SSF143243 8 219 1.44E-51 T 15-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02310 7f3a08680c08b6fe4888fe2141be446a 249 Gene3D G3DSA:3.30.460.80 1 77 8.7E-6 T 15-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02310 7f3a08680c08b6fe4888fe2141be446a 249 Gene3D G3DSA:3.30.460.80 100 179 8.5E-28 T 15-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02310 7f3a08680c08b6fe4888fe2141be446a 249 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 12 207 32.333 T 15-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02310 7f3a08680c08b6fe4888fe2141be446a 249 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 160 181 - T 15-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_11160 ea01d20ae3a84e2476e93fa6913f4b63 275 Gene3D G3DSA:3.20.20.370 79 274 3.6E-46 T 15-10-2018 D934_11160 ea01d20ae3a84e2476e93fa6913f4b63 275 Pfam PF01522 Polysaccharide deacetylase 91 210 4.4E-28 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 D934_11160 ea01d20ae3a84e2476e93fa6913f4b63 275 SUPERFAMILY SSF88713 82 271 5.68E-50 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D934_02105 1a1db058cc109ebacd76906cb6759c4b 964 Pfam PF00082 Subtilase family 89 391 4.3E-38 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 D934_02105 1a1db058cc109ebacd76906cb6759c4b 964 SUPERFAMILY SSF52743 72 401 2.36E-59 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D934_02105 1a1db058cc109ebacd76906cb6759c4b 964 PRINTS PR00723 Subtilisin serine protease family (S8) signature 129 142 2.9E-14 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related D934_02105 1a1db058cc109ebacd76906cb6759c4b 964 PRINTS PR00723 Subtilisin serine protease family (S8) signature 340 356 2.9E-14 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related D934_02105 1a1db058cc109ebacd76906cb6759c4b 964 PRINTS PR00723 Subtilisin serine protease family (S8) signature 89 108 2.9E-14 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related D934_02105 1a1db058cc109ebacd76906cb6759c4b 964 SUPERFAMILY SSF103515 662 960 2.75E-38 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily D934_02105 1a1db058cc109ebacd76906cb6759c4b 964 Gene3D G3DSA:2.40.128.130 653 962 6.6E-37 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily D934_02105 1a1db058cc109ebacd76906cb6759c4b 964 Gene3D G3DSA:3.40.50.200 33 400 1.7E-61 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D934_02105 1a1db058cc109ebacd76906cb6759c4b 964 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 94 105 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site D934_02105 1a1db058cc109ebacd76906cb6759c4b 964 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 430 461 9.8E-11 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat D934_02105 1a1db058cc109ebacd76906cb6759c4b 964 Pfam PF03797 Autotransporter beta-domain 700 935 2.0E-30 T 15-10-2018 IPR005546 Autotransporter beta-domain D934_02105 1a1db058cc109ebacd76906cb6759c4b 964 Pfam PF12951 Passenger-associated-transport-repeat 431 460 1.6E-8 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat D934_02105 1a1db058cc109ebacd76906cb6759c4b 964 SMART SM00869 696 956 5.5E-23 T 15-10-2018 IPR005546 Autotransporter beta-domain D934_02105 1a1db058cc109ebacd76906cb6759c4b 964 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 341 351 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site D934_04325 c37ddaa26247bf5ad5d8491481a871b4 220 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 8 211 35.467 T 15-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 D934_04325 c37ddaa26247bf5ad5d8491481a871b4 220 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 11 206 4.5E-41 T 15-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 D934_04325 c37ddaa26247bf5ad5d8491481a871b4 220 Gene3D G3DSA:3.20.20.70 6 214 8.3E-58 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_04325 c37ddaa26247bf5ad5d8491481a871b4 220 SUPERFAMILY SSF51366 8 209 1.41E-53 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 279 333 - T 15-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 Gene3D G3DSA:1.20.210.10 30 564 2.1E-189 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 646 0.0 T 15-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 277 298 4.5E-97 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 4.5E-97 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 382 400 4.5E-97 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 215 4.5E-97 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 226 245 4.5E-97 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 460 481 4.5E-97 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 165 177 4.5E-97 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 368 4.5E-97 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 410 429 4.5E-97 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 119 4.5E-97 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 338 4.5E-97 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 123 147 4.5E-97 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 503 9.1E-137 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04615 52b8bb734e08c7b86dc11250b8de6f3b 665 SUPERFAMILY SSF81442 42 557 7.46E-177 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04245 91150ed26eaabec954b71f0b0cad5875 255 SUPERFAMILY SSF53474 8 253 5.08E-40 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_04245 91150ed26eaabec954b71f0b0cad5875 255 Gene3D G3DSA:3.40.50.1820 1 254 1.3E-53 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_04245 91150ed26eaabec954b71f0b0cad5875 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 1 252 40.711 T 15-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 D934_04245 91150ed26eaabec954b71f0b0cad5875 255 Pfam PF12697 Alpha/beta hydrolase family 12 242 4.2E-21 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D934_04245 91150ed26eaabec954b71f0b0cad5875 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 7 251 6.1E-109 T 15-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 D934_01100 e5737d5ffc5b35e285e4ac6baa9c937e 148 Gene3D G3DSA:3.40.50.9100 1 147 1.1E-59 T 15-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D934_01100 e5737d5ffc5b35e285e4ac6baa9c937e 148 PIRSF PIRSF001399 1 146 1.2E-53 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D934_01100 e5737d5ffc5b35e285e4ac6baa9c937e 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 68.922 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D934_01100 e5737d5ffc5b35e285e4ac6baa9c937e 148 SUPERFAMILY SSF52304 3 145 1.26E-57 T 15-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D934_01100 e5737d5ffc5b35e285e4ac6baa9c937e 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 15-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D934_01100 e5737d5ffc5b35e285e4ac6baa9c937e 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 142 1.0E-53 T 15-10-2018 D934_01100 e5737d5ffc5b35e285e4ac6baa9c937e 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 142 1.5E-53 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D934_01100 e5737d5ffc5b35e285e4ac6baa9c937e 148 Pfam PF01220 Dehydroquinase class II 4 140 1.2E-55 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D934_01435 adf59ca0c476301897b7e45e6c33a868 347 SUPERFAMILY SSF52540 4 269 4.02E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_01435 adf59ca0c476301897b7e45e6c33a868 347 ProSitePatterns PS00321 recA signature. 215 223 - T 15-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 D934_01435 adf59ca0c476301897b7e45e6c33a868 347 SUPERFAMILY SSF54752 270 327 5.76E-20 T 15-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal D934_01435 adf59ca0c476301897b7e45e6c33a868 347 Gene3D G3DSA:3.40.50.300 30 270 1.4E-77 T 15-10-2018 D934_01435 adf59ca0c476301897b7e45e6c33a868 347 SMART SM00382 57 230 1.9E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_01435 adf59ca0c476301897b7e45e6c33a868 347 Pfam PF00154 recA bacterial DNA recombination protein 7 270 3.4E-139 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D934_01435 adf59ca0c476301897b7e45e6c33a868 347 Hamap MF_00268 Protein RecA [recA]. 5 331 50.336 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D934_01435 adf59ca0c476301897b7e45e6c33a868 347 PRINTS PR00142 RecA protein signature 127 156 8.2E-85 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D934_01435 adf59ca0c476301897b7e45e6c33a868 347 PRINTS PR00142 RecA protein signature 212 240 8.2E-85 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D934_01435 adf59ca0c476301897b7e45e6c33a868 347 PRINTS PR00142 RecA protein signature 165 194 8.2E-85 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D934_01435 adf59ca0c476301897b7e45e6c33a868 347 PRINTS PR00142 RecA protein signature 299 316 8.2E-85 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D934_01435 adf59ca0c476301897b7e45e6c33a868 347 PRINTS PR00142 RecA protein signature 93 122 8.2E-85 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D934_01435 adf59ca0c476301897b7e45e6c33a868 347 PRINTS PR00142 RecA protein signature 245 274 8.2E-85 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D934_01435 adf59ca0c476301897b7e45e6c33a868 347 Gene3D G3DSA:3.30.250.10 271 345 6.9E-25 T 15-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal D934_01435 adf59ca0c476301897b7e45e6c33a868 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 326 9.3E-165 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D934_03100 82e5cd8c0fabcd8c92343036103a0631 237 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 168 3.6E-36 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D934_03100 82e5cd8c0fabcd8c92343036103a0631 237 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 143 160 - T 15-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D934_03100 82e5cd8c0fabcd8c92343036103a0631 237 SUPERFAMILY SSF51735 4 236 3.65E-29 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_03100 82e5cd8c0fabcd8c92343036103a0631 237 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 122 235 1.8E-27 T 15-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D934_03100 82e5cd8c0fabcd8c92343036103a0631 237 Gene3D G3DSA:3.30.360.10 121 206 2.0E-57 T 15-10-2018 D934_03100 82e5cd8c0fabcd8c92343036103a0631 237 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 237 27.351 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D934_03100 82e5cd8c0fabcd8c92343036103a0631 237 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 119 1.5E-22 T 15-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D934_03100 82e5cd8c0fabcd8c92343036103a0631 237 Gene3D G3DSA:3.40.50.720 6 234 2.0E-57 T 15-10-2018 D934_03100 82e5cd8c0fabcd8c92343036103a0631 237 SUPERFAMILY SSF55347 121 208 2.62E-20 T 15-10-2018 D934_03100 82e5cd8c0fabcd8c92343036103a0631 237 PIRSF PIRSF000161 3 237 8.0E-61 T 15-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 SUPERFAMILY SSF52743 14 346 9.95E-56 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 SUPERFAMILY SSF51126 285 519 5.34E-17 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 SMART SM00869 640 898 7.2E-21 T 15-10-2018 IPR005546 Autotransporter beta-domain D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 Pfam PF03797 Autotransporter beta-domain 647 877 5.2E-29 T 15-10-2018 IPR005546 Autotransporter beta-domain D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 Pfam PF00082 Subtilase family 31 335 2.1E-33 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 36 47 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 285 295 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 Gene3D G3DSA:3.40.50.200 8 346 2.0E-55 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 Gene3D G3DSA:2.40.128.130 598 908 8.9E-33 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 374 406 1.0E-11 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 PRINTS PR00723 Subtilisin serine protease family (S8) signature 31 50 1.8E-11 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 PRINTS PR00723 Subtilisin serine protease family (S8) signature 284 300 1.8E-11 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 PRINTS PR00723 Subtilisin serine protease family (S8) signature 73 86 1.8E-11 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 Pfam PF12951 Passenger-associated-transport-repeat 375 405 1.2E-9 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat D934_07610 aa507b45cc727dcaaa7504af2707a28d 908 SUPERFAMILY SSF103515 606 904 2.09E-32 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily D934_03310 9558891bde2a7af7c818453e4ccac827 265 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 265 14.932 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03310 9558891bde2a7af7c818453e4ccac827 265 Pfam PF00119 ATP synthase A chain 38 259 4.3E-54 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03310 9558891bde2a7af7c818453e4ccac827 265 PRINTS PR00123 ATP synthase A subunit signature 245 260 2.7E-12 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03310 9558891bde2a7af7c818453e4ccac827 265 PRINTS PR00123 ATP synthase A subunit signature 95 111 2.7E-12 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03310 9558891bde2a7af7c818453e4ccac827 265 PRINTS PR00123 ATP synthase A subunit signature 192 214 2.7E-12 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03310 9558891bde2a7af7c818453e4ccac827 265 ProSitePatterns PS00449 ATP synthase a subunit signature. 195 204 - T 15-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03310 9558891bde2a7af7c818453e4ccac827 265 Gene3D G3DSA:1.20.120.220 86 265 5.1E-51 T 15-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03310 9558891bde2a7af7c818453e4ccac827 265 SUPERFAMILY SSF81336 88 259 6.67E-39 T 15-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03310 9558891bde2a7af7c818453e4ccac827 265 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 26 259 1.6E-42 T 15-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_00530 93dab1f1674ce6358fc82a8f3e691aaf 868 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 165 2.3E-14 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain D934_00530 93dab1f1674ce6358fc82a8f3e691aaf 868 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 34 868 6.0E-233 T 15-10-2018 IPR010104 Bacterial TonB-dependent receptor D934_00530 93dab1f1674ce6358fc82a8f3e691aaf 868 Gene3D G3DSA:2.40.170.20 245 868 1.3E-50 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D934_00530 93dab1f1674ce6358fc82a8f3e691aaf 868 SUPERFAMILY SSF56935 28 868 1.34E-94 T 15-10-2018 D934_00530 93dab1f1674ce6358fc82a8f3e691aaf 868 Gene3D G3DSA:2.170.130.10 26 170 1.2E-15 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D934_00530 93dab1f1674ce6358fc82a8f3e691aaf 868 Pfam PF00593 TonB dependent receptor 403 867 2.9E-42 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D934_02330 25537573b96ce00a66dc56c4af541c82 744 SUPERFAMILY SSF50692 678 735 1.27E-9 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily D934_02330 25537573b96ce00a66dc56c4af541c82 744 Gene3D G3DSA:3.40.50.740 226 422 8.6E-9 T 15-10-2018 D934_02330 25537573b96ce00a66dc56c4af541c82 744 SUPERFAMILY SSF54862 89 223 6.7E-37 T 15-10-2018 D934_02330 25537573b96ce00a66dc56c4af541c82 744 Pfam PF00384 Molybdopterin oxidoreductase 285 414 8.8E-13 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02330 25537573b96ce00a66dc56c4af541c82 744 Pfam PF00384 Molybdopterin oxidoreductase 499 608 1.8E-8 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02330 25537573b96ce00a66dc56c4af541c82 744 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 158 168 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02330 25537573b96ce00a66dc56c4af541c82 744 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 111 123 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02330 25537573b96ce00a66dc56c4af541c82 744 Gene3D G3DSA:3.30.70.20 138 217 1.3E-7 T 15-10-2018 D934_02330 25537573b96ce00a66dc56c4af541c82 744 SMART SM00929 96 136 3.4E-20 T 15-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02330 25537573b96ce00a66dc56c4af541c82 744 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 89 3.3E-19 T 15-10-2018 D934_02330 25537573b96ce00a66dc56c4af541c82 744 Gene3D G3DSA:3.40.50.740 425 634 5.6E-12 T 15-10-2018 D934_02330 25537573b96ce00a66dc56c4af541c82 744 Gene3D G3DSA:3.10.20.740 14 136 1.0E-40 T 15-10-2018 D934_02330 25537573b96ce00a66dc56c4af541c82 744 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 17 607 1.2E-209 T 15-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02330 25537573b96ce00a66dc56c4af541c82 744 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 44 61 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02330 25537573b96ce00a66dc56c4af541c82 744 Pfam PF01568 Molydopterin dinucleotide binding domain 676 730 1.2E-8 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 D934_02330 25537573b96ce00a66dc56c4af541c82 744 SUPERFAMILY SSF54292 15 87 1.72E-18 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D934_02330 25537573b96ce00a66dc56c4af541c82 744 SUPERFAMILY SSF53706 226 629 1.57E-74 T 15-10-2018 D934_02330 25537573b96ce00a66dc56c4af541c82 744 Gene3D G3DSA:2.40.40.20 635 740 8.0E-8 T 15-10-2018 D934_02330 25537573b96ce00a66dc56c4af541c82 744 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 96 133 1.4E-16 T 15-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 Gene3D G3DSA:1.10.1440.20 600 660 1.2E-21 T 15-10-2018 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 Gene3D G3DSA:3.20.19.10 661 903 1.9E-100 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 SUPERFAMILY SSF53732 3 633 6.15E-222 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 Pfam PF00694 Aconitase C-terminal domain 700 830 2.7E-44 T 15-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 SUPERFAMILY SSF52016 639 901 1.63E-85 T 15-10-2018 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 ProSitePatterns PS01244 Aconitase family signature 2. 501 514 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 PRINTS PR00415 Aconitase family signature 277 290 7.6E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 PRINTS PR00415 Aconitase family signature 168 176 7.6E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 PRINTS PR00415 Aconitase family signature 291 304 7.6E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 PRINTS PR00415 Aconitase family signature 144 157 7.6E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 PRINTS PR00415 Aconitase family signature 439 450 7.6E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 PRINTS PR00415 Aconitase family signature 215 230 7.6E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 PRINTS PR00415 Aconitase family signature 371 385 7.6E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 PRINTS PR00415 Aconitase family signature 201 214 7.6E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 PRINTS PR00415 Aconitase family signature 501 514 7.6E-41 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 Gene3D G3DSA:3.30.499.10 372 598 3.7E-99 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 ProSitePatterns PS00450 Aconitase family signature 1. 435 451 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 Pfam PF00330 Aconitase family (aconitate hydratase) 67 570 5.4E-178 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 17 902 0.0 T 15-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 D934_02205 0d341fee43d10918832b4bc43ab100d7 908 Gene3D G3DSA:3.30.499.20 4 371 1.1E-157 T 15-10-2018 D934_00120 062a84e1b9b0be07d0b0ae20d0eaf387 203 Gene3D G3DSA:1.10.287.990 20 89 3.1E-29 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_00120 062a84e1b9b0be07d0b0ae20d0eaf387 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 1.8E-37 T 15-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_00120 062a84e1b9b0be07d0b0ae20d0eaf387 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 1.5E-24 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_00120 062a84e1b9b0be07d0b0ae20d0eaf387 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-24 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_00120 062a84e1b9b0be07d0b0ae20d0eaf387 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 1.5E-24 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_00120 062a84e1b9b0be07d0b0ae20d0eaf387 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 1.5E-24 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_00120 062a84e1b9b0be07d0b0ae20d0eaf387 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-24 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_00120 062a84e1b9b0be07d0b0ae20d0eaf387 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 7.9E-33 T 15-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_00120 062a84e1b9b0be07d0b0ae20d0eaf387 203 SUPERFAMILY SSF46609 1 89 2.49E-36 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_00120 062a84e1b9b0be07d0b0ae20d0eaf387 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 15-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_00120 062a84e1b9b0be07d0b0ae20d0eaf387 203 Gene3D G3DSA:2.40.500.20 90 203 1.5E-43 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_00120 062a84e1b9b0be07d0b0ae20d0eaf387 203 PIRSF PIRSF000349 1 203 6.3E-78 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_00120 062a84e1b9b0be07d0b0ae20d0eaf387 203 SUPERFAMILY SSF54719 88 202 6.42E-43 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_13050 57510de1329aeb2b1b1a6742a38881bd 319 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 303 2.0E-126 T 15-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 D934_13050 57510de1329aeb2b1b1a6742a38881bd 319 Gene3D G3DSA:3.40.50.1100 37 155 2.5E-111 T 15-10-2018 D934_13050 57510de1329aeb2b1b1a6742a38881bd 319 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 15-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 D934_13050 57510de1329aeb2b1b1a6742a38881bd 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 291 3.1E-61 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D934_13050 57510de1329aeb2b1b1a6742a38881bd 319 Gene3D G3DSA:3.40.50.1100 7 300 2.5E-111 T 15-10-2018 D934_13050 57510de1329aeb2b1b1a6742a38881bd 319 SUPERFAMILY SSF53686 1 305 1.44E-91 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D934_13050 57510de1329aeb2b1b1a6742a38881bd 319 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 303 1.2E-135 T 15-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 D934_10315 43122758addbe11b356c078571239fbd 963 Gene3D G3DSA:1.10.287.1150 100 182 5.8E-21 T 15-10-2018 D934_10315 43122758addbe11b356c078571239fbd 963 Pfam PF00676 Dehydrogenase E1 component 230 537 3.4E-51 T 15-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 D934_10315 43122758addbe11b356c078571239fbd 963 Gene3D G3DSA:3.40.50.11610 745 950 9.3E-166 T 15-10-2018 D934_10315 43122758addbe11b356c078571239fbd 963 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 813 953 3.0E-52 T 15-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 D934_10315 43122758addbe11b356c078571239fbd 963 SUPERFAMILY SSF52518 598 815 8.44E-53 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold D934_10315 43122758addbe11b356c078571239fbd 963 SUPERFAMILY SSF52518 138 566 7.2E-86 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold D934_10315 43122758addbe11b356c078571239fbd 963 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 36 74 5.7E-15 T 15-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 D934_10315 43122758addbe11b356c078571239fbd 963 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 39 953 0.0 T 15-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 D934_10315 43122758addbe11b356c078571239fbd 963 PIRSF PIRSF000157 26 955 0.0 T 15-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 D934_10315 43122758addbe11b356c078571239fbd 963 SMART SM00861 615 808 1.6E-53 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D934_10315 43122758addbe11b356c078571239fbd 963 Gene3D G3DSA:3.40.50.12470 578 824 9.3E-166 T 15-10-2018 D934_10315 43122758addbe11b356c078571239fbd 963 Pfam PF02779 Transketolase, pyrimidine binding domain 615 809 1.3E-62 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D934_10315 43122758addbe11b356c078571239fbd 963 Gene3D G3DSA:3.40.50.970 183 550 2.5E-145 T 15-10-2018 D934_13585 660aad8b2e18ab604b72dcd81f549168 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 6.0E-23 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13585 660aad8b2e18ab604b72dcd81f549168 76 Gene3D G3DSA:4.10.640.10 20 75 6.6E-25 T 15-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13585 660aad8b2e18ab604b72dcd81f549168 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 2.6E-33 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13585 660aad8b2e18ab604b72dcd81f549168 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 3.8E-15 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13585 660aad8b2e18ab604b72dcd81f549168 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 3.8E-15 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13585 660aad8b2e18ab604b72dcd81f549168 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 3.8E-15 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13585 660aad8b2e18ab604b72dcd81f549168 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 3.8E-15 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13585 660aad8b2e18ab604b72dcd81f549168 76 SUPERFAMILY SSF46911 3 74 1.09E-27 T 15-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13585 660aad8b2e18ab604b72dcd81f549168 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 15-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13585 660aad8b2e18ab604b72dcd81f549168 76 Pfam PF01084 Ribosomal protein S18 18 68 6.4E-23 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13585 660aad8b2e18ab604b72dcd81f549168 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.205 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_00405 1e01eea759daf8a345715955e0272627 658 Gene3D G3DSA:3.40.50.300 272 622 7.8E-105 T 15-10-2018 D934_00405 1e01eea759daf8a345715955e0272627 658 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 658 35.985 T 15-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 D934_00405 1e01eea759daf8a345715955e0272627 658 SUPERFAMILY SSF52540 2 628 7.81E-156 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00405 1e01eea759daf8a345715955e0272627 658 Gene3D G3DSA:1.10.486.10 375 534 7.8E-105 T 15-10-2018 D934_00405 1e01eea759daf8a345715955e0272627 658 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 4 657 0.0 T 15-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 D934_00405 1e01eea759daf8a345715955e0272627 658 Pfam PF13361 UvrD-like helicase C-terminal domain 269 603 1.3E-62 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 D934_00405 1e01eea759daf8a345715955e0272627 658 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 263 6.7E-66 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 D934_00405 1e01eea759daf8a345715955e0272627 658 Gene3D G3DSA:1.10.10.160 106 181 3.6E-84 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily D934_00405 1e01eea759daf8a345715955e0272627 658 Gene3D G3DSA:3.40.50.300 4 265 3.6E-84 T 15-10-2018 D934_04840 5d523bcf2089956f150e0cc1b36c4a8f 152 SUPERFAMILY SSF55811 5 139 4.87E-27 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D934_04840 5d523bcf2089956f150e0cc1b36c4a8f 152 Pfam PF00293 NUDIX domain 12 121 1.9E-13 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D934_04840 5d523bcf2089956f150e0cc1b36c4a8f 152 Gene3D G3DSA:3.90.79.10 4 151 4.9E-37 T 15-10-2018 D934_04840 5d523bcf2089956f150e0cc1b36c4a8f 152 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D934_03610 89212883402f847caceee599fb16379b 328 Gene3D G3DSA:3.90.110.10 157 328 3.1E-60 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 D934_03610 89212883402f847caceee599fb16379b 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 54.967 T 15-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 D934_03610 89212883402f847caceee599fb16379b 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 150 3.5E-36 T 15-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 D934_03610 89212883402f847caceee599fb16379b 328 SUPERFAMILY SSF56327 159 327 3.09E-57 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 D934_03610 89212883402f847caceee599fb16379b 328 PIRSF PIRSF000102 1 326 4.2E-62 T 15-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 D934_03610 89212883402f847caceee599fb16379b 328 Gene3D G3DSA:3.40.50.720 1 156 3.6E-56 T 15-10-2018 D934_03610 89212883402f847caceee599fb16379b 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 4 321 1.2E-139 T 15-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 D934_03610 89212883402f847caceee599fb16379b 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 322 1.8E-30 T 15-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 D934_03610 89212883402f847caceee599fb16379b 328 SUPERFAMILY SSF51735 5 157 7.65E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_03110 ba337352941ff10d590d3803e27c18e9 1080 Pfam PF02142 MGS-like domain 963 1047 4.4E-17 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain D934_03110 ba337352941ff10d590d3803e27c18e9 1080 SUPERFAMILY SSF52335 944 1077 2.22E-38 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D934_03110 ba337352941ff10d590d3803e27c18e9 1080 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1074 13.469 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 Gene3D G3DSA:3.30.470.20 119 403 1.7E-128 T 15-10-2018 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 SUPERFAMILY SSF52440 1 127 2.59E-48 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D934_03110 ba337352941ff10d590d3803e27c18e9 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 882 5.4E-38 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 7.8E-71 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.306 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 Gene3D G3DSA:3.30.470.20 666 942 2.1E-113 T 15-10-2018 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 Gene3D G3DSA:3.40.50.20 555 663 4.8E-49 T 15-10-2018 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 Gene3D G3DSA:3.40.50.1380 945 1079 3.6E-37 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D934_03110 ba337352941ff10d590d3803e27c18e9 1080 Gene3D G3DSA:3.40.50.20 1 116 1.5E-48 T 15-10-2018 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 428 548 2.9E-37 T 15-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 SMART SM01096 425 548 2.8E-68 T 15-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 SUPERFAMILY SSF56059 674 939 1.34E-100 T 15-10-2018 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.2E-65 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.2E-65 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.2E-65 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.2E-65 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.2E-65 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.2E-65 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.2E-65 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 SUPERFAMILY SSF48108 396 555 1.7E-48 T 15-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 SUPERFAMILY SSF56059 128 401 2.65E-108 T 15-10-2018 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 Gene3D G3DSA:1.10.1030.10 404 554 5.8E-45 T 15-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03110 ba337352941ff10d590d3803e27c18e9 1080 SUPERFAMILY SSF52440 558 676 2.01E-49 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D934_03110 ba337352941ff10d590d3803e27c18e9 1080 SMART SM00851 962 1048 3.4E-29 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain D934_03110 ba337352941ff10d590d3803e27c18e9 1080 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1059 0.0 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_02410 812ce39d1dc064e3d43483de7555eb67 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 395 7.4E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_02410 812ce39d1dc064e3d43483de7555eb67 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 352 7.4E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_02410 812ce39d1dc064e3d43483de7555eb67 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 376 7.4E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_02410 812ce39d1dc064e3d43483de7555eb67 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 338 7.4E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_02410 812ce39d1dc064e3d43483de7555eb67 545 Gene3D G3DSA:1.10.287.130 146 242 5.0E-13 T 15-10-2018 D934_02410 812ce39d1dc064e3d43483de7555eb67 545 Gene3D G3DSA:3.30.450.20 18 145 8.3E-11 T 15-10-2018 D934_02410 812ce39d1dc064e3d43483de7555eb67 545 SMART SM00448 425 537 3.4E-6 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_02410 812ce39d1dc064e3d43483de7555eb67 545 Gene3D G3DSA:3.30.565.10 243 401 1.7E-34 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_02410 812ce39d1dc064e3d43483de7555eb67 545 SUPERFAMILY SSF55874 234 397 3.01E-38 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_02410 812ce39d1dc064e3d43483de7555eb67 545 Pfam PF00072 Response regulator receiver domain 427 536 8.0E-9 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_02410 812ce39d1dc064e3d43483de7555eb67 545 Gene3D G3DSA:3.40.50.2300 416 545 3.2E-13 T 15-10-2018 D934_02410 812ce39d1dc064e3d43483de7555eb67 545 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 289 397 3.2E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_02410 812ce39d1dc064e3d43483de7555eb67 545 Pfam PF12860 PAS fold 32 145 2.4E-41 T 15-10-2018 D934_02410 812ce39d1dc064e3d43483de7555eb67 545 SUPERFAMILY SSF47384 165 245 7.65E-12 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D934_02410 812ce39d1dc064e3d43483de7555eb67 545 SMART SM00388 179 244 5.5E-8 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_02410 812ce39d1dc064e3d43483de7555eb67 545 SMART SM00387 288 398 5.3E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_02410 812ce39d1dc064e3d43483de7555eb67 545 SUPERFAMILY SSF55785 19 139 1.72E-6 T 15-10-2018 IPR035965 PAS domain superfamily D934_02410 812ce39d1dc064e3d43483de7555eb67 545 Pfam PF00512 His Kinase A (phospho-acceptor) domain 180 244 5.1E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_02410 812ce39d1dc064e3d43483de7555eb67 545 SUPERFAMILY SSF52172 424 541 1.18E-14 T 15-10-2018 IPR011006 CheY-like superfamily D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 SUPERFAMILY SSF48557 35 421 2.51E-87 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 ProSitePatterns PS00163 Fumarate lyases signature. 291 300 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 Pfam PF00206 Lyase 46 314 1.1E-46 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 Gene3D G3DSA:1.10.40.30 375 418 4.8E-103 T 15-10-2018 D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 Gene3D G3DSA:1.10.275.10 46 244 4.8E-103 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 PRINTS PR00145 Argininosuccinate lyase family signature 116 138 2.9E-30 T 15-10-2018 D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 PRINTS PR00145 Argininosuccinate lyase family signature 291 307 2.9E-30 T 15-10-2018 D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 PRINTS PR00145 Argininosuccinate lyase family signature 325 344 2.9E-30 T 15-10-2018 D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 PRINTS PR00145 Argininosuccinate lyase family signature 157 177 2.9E-30 T 15-10-2018 D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 PRINTS PR00145 Argininosuccinate lyase family signature 208 224 2.9E-30 T 15-10-2018 D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 PRINTS PR00149 Fumarate lyase superfamily signature 162 180 6.9E-14 T 15-10-2018 IPR000362 Fumarate lyase family D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 PRINTS PR00149 Fumarate lyase superfamily signature 291 307 6.9E-14 T 15-10-2018 IPR000362 Fumarate lyase family D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 6.9E-14 T 15-10-2018 IPR000362 Fumarate lyase family D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 Gene3D G3DSA:1.20.200.10 134 374 4.8E-103 T 15-10-2018 D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 Hamap MF_00006 Argininosuccinate lyase [argH]. 16 441 30.12 T 15-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D934_02545 aa8dd43204413bf1a6428a599b6aae0e 452 TIGRFAM TIGR00838 argH: argininosuccinate lyase 36 411 5.4E-86 T 15-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D934_07795 f7e3435295f3244da491221f581cf7e3 179 SUPERFAMILY SSF53955 34 176 7.16E-49 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_07795 f7e3435295f3244da491221f581cf7e3 179 Gene3D G3DSA:1.10.530.40 20 177 5.1E-49 T 15-10-2018 D934_07795 f7e3435295f3244da491221f581cf7e3 179 Pfam PF00959 Phage lysozyme 62 168 3.1E-17 T 15-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 D934_09015 f7e3435295f3244da491221f581cf7e3 179 SUPERFAMILY SSF53955 34 176 7.16E-49 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_09015 f7e3435295f3244da491221f581cf7e3 179 Gene3D G3DSA:1.10.530.40 20 177 5.1E-49 T 15-10-2018 D934_09015 f7e3435295f3244da491221f581cf7e3 179 Pfam PF00959 Phage lysozyme 62 168 3.1E-17 T 15-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 D934_03125 bbee6ed7d0246f0b6545feac7c8cd5b4 602 Gene3D G3DSA:3.90.1640.30 45 334 5.5E-81 T 15-10-2018 D934_03125 bbee6ed7d0246f0b6545feac7c8cd5b4 602 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 37 580 5.5E-132 T 15-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 D934_03125 bbee6ed7d0246f0b6545feac7c8cd5b4 602 Gene3D G3DSA:3.10.310.30 340 469 8.3E-28 T 15-10-2018 D934_03125 bbee6ed7d0246f0b6545feac7c8cd5b4 602 SUPERFAMILY SSF64182 45 474 3.66E-104 T 15-10-2018 IPR038763 DHH phosphoesterase superfamily D934_03125 bbee6ed7d0246f0b6545feac7c8cd5b4 602 Pfam PF01368 DHH family 71 198 1.5E-9 T 15-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 D934_03125 bbee6ed7d0246f0b6545feac7c8cd5b4 602 Pfam PF02272 DHHA1 domain 330 462 1.0E-21 T 15-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 D934_13020 03f8162d6d5487c7964900d714dc572c 463 Pfam PF09312 SurA N-terminal domain 33 150 1.9E-44 T 15-10-2018 IPR015391 SurA N-terminal D934_13020 03f8162d6d5487c7964900d714dc572c 463 SUPERFAMILY SSF109998 33 205 5.36E-41 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily D934_13020 03f8162d6d5487c7964900d714dc572c 463 Gene3D G3DSA:1.10.4030.10 30 153 4.8E-34 T 15-10-2018 D934_13020 03f8162d6d5487c7964900d714dc572c 463 Gene3D G3DSA:3.10.50.40 179 395 3.0E-66 T 15-10-2018 D934_13020 03f8162d6d5487c7964900d714dc572c 463 Hamap MF_01183 Chaperone SurA [surA]. 9 436 30.131 T 15-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 D934_13020 03f8162d6d5487c7964900d714dc572c 463 Pfam PF00639 PPIC-type PPIASE domain 298 388 4.4E-25 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 D934_13020 03f8162d6d5487c7964900d714dc572c 463 Pfam PF00639 PPIC-type PPIASE domain 182 276 4.6E-18 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 D934_13020 03f8162d6d5487c7964900d714dc572c 463 SUPERFAMILY SSF54534 291 392 9.81E-26 T 15-10-2018 D934_13020 03f8162d6d5487c7964900d714dc572c 463 Gene3D G3DSA:3.10.50.40 289 394 3.0E-66 T 15-10-2018 D934_13020 03f8162d6d5487c7964900d714dc572c 463 SUPERFAMILY SSF54534 177 280 1.83E-23 T 15-10-2018 D934_07885 c1cece78130fa38740cb9a5110c09572 334 Gene3D G3DSA:2.40.10.10 105 219 1.4E-23 T 15-10-2018 D934_07885 c1cece78130fa38740cb9a5110c09572 334 SUPERFAMILY SSF50494 110 307 4.67E-22 T 15-10-2018 IPR009003 Peptidase S1, PA clan D934_07885 c1cece78130fa38740cb9a5110c09572 334 Gene3D G3DSA:2.40.10.10 224 331 5.2E-8 T 15-10-2018 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 Pfam PF00958 GMP synthase C terminal domain 430 521 8.5E-43 T 15-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 522 4.1E-146 T 15-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 Gene3D G3DSA:3.40.50.620 207 402 6.5E-72 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 Gene3D G3DSA:3.40.50.880 6 206 7.9E-54 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 Pfam PF00117 Glutamine amidotransferase class-I 12 197 4.3E-40 T 15-10-2018 IPR017926 Glutamine amidotransferase D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 SUPERFAMILY SSF54810 402 522 5.1E-49 T 15-10-2018 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.5E-7 T 15-10-2018 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.5E-7 T 15-10-2018 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 1.5E-7 T 15-10-2018 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 Pfam PF02540 NAD synthase 211 286 8.6E-8 T 15-10-2018 IPR022310 NAD/GMP synthase D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 SUPERFAMILY SSF52402 194 416 8.16E-57 T 15-10-2018 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 522 54.968 T 15-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 PRINTS PR00097 Anthranilate synthase component II signature 174 187 3.5E-6 T 15-10-2018 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.5E-6 T 15-10-2018 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.5E-6 T 15-10-2018 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 201 9.6E-76 T 15-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 SUPERFAMILY SSF52317 5 234 9.17E-56 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 Gene3D G3DSA:3.30.300.10 403 522 3.7E-50 T 15-10-2018 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 3.1E-6 T 15-10-2018 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 3.1E-6 T 15-10-2018 D934_11320 d0281e5bbaf86790d00286ccc1aa5b94 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 3.1E-6 T 15-10-2018 D934_09425 2260eb823c476d1c09207cf3f15e9703 249 SUPERFAMILY SSF53254 1 246 5.74E-74 T 15-10-2018 IPR029033 Histidine phosphatase superfamily D934_09425 2260eb823c476d1c09207cf3f15e9703 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 247 1.1E-124 T 15-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 D934_09425 2260eb823c476d1c09207cf3f15e9703 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 15-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 D934_09425 2260eb823c476d1c09207cf3f15e9703 249 PIRSF PIRSF000709 172 241 0.025 T 15-10-2018 D934_09425 2260eb823c476d1c09207cf3f15e9703 249 PIRSF PIRSF000709 1 112 9.3E-7 T 15-10-2018 D934_09425 2260eb823c476d1c09207cf3f15e9703 249 SMART SM00855 4 190 1.8E-23 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D934_09425 2260eb823c476d1c09207cf3f15e9703 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 136 1.7E-26 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D934_09425 2260eb823c476d1c09207cf3f15e9703 249 Gene3D G3DSA:3.40.50.1240 2 249 2.2E-81 T 15-10-2018 IPR029033 Histidine phosphatase superfamily D934_09425 2260eb823c476d1c09207cf3f15e9703 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 229 43.754 T 15-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 D934_10320 f9b27b5b719d69d3452378720cf306be 387 SUPERFAMILY SSF51230 1 80 2.09E-24 T 15-10-2018 IPR011053 Single hybrid motif D934_10320 f9b27b5b719d69d3452378720cf306be 387 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 158 384 5.0E-83 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 D934_10320 f9b27b5b719d69d3452378720cf306be 387 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D934_10320 f9b27b5b719d69d3452378720cf306be 387 Gene3D G3DSA:3.30.559.10 155 386 7.1E-95 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D934_10320 f9b27b5b719d69d3452378720cf306be 387 Gene3D G3DSA:4.10.320.10 108 148 8.3E-9 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 D934_10320 f9b27b5b719d69d3452378720cf306be 387 Pfam PF02817 e3 binding domain 110 140 7.1E-6 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 D934_10320 f9b27b5b719d69d3452378720cf306be 387 Pfam PF00364 Biotin-requiring enzyme 4 76 3.8E-18 T 15-10-2018 IPR000089 Biotin/lipoyl attachment D934_10320 f9b27b5b719d69d3452378720cf306be 387 SUPERFAMILY SSF52777 158 385 1.69E-86 T 15-10-2018 D934_10320 f9b27b5b719d69d3452378720cf306be 387 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 386 1.6E-178 T 15-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 D934_10320 f9b27b5b719d69d3452378720cf306be 387 SUPERFAMILY SSF47005 101 145 8.11E-8 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 D934_10320 f9b27b5b719d69d3452378720cf306be 387 Gene3D G3DSA:2.40.50.100 1 100 1.6E-21 T 15-10-2018 D934_02140 d8ce633cea1617ce1048dcfddab4b394 471 SUPERFAMILY SSF51984 2 91 1.01E-16 T 15-10-2018 D934_02140 d8ce633cea1617ce1048dcfddab4b394 471 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 3 471 7.0E-181 T 15-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 D934_02140 d8ce633cea1617ce1048dcfddab4b394 471 SUPERFAMILY SSF53623 96 330 2.88E-51 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D934_02140 d8ce633cea1617ce1048dcfddab4b394 471 SUPERFAMILY SSF53244 333 469 2.09E-32 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D934_02140 d8ce633cea1617ce1048dcfddab4b394 471 Gene3D G3DSA:3.40.1190.10 92 335 8.7E-60 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D934_02140 d8ce633cea1617ce1048dcfddab4b394 471 Gene3D G3DSA:3.90.190.20 336 471 2.0E-25 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D934_02140 d8ce633cea1617ce1048dcfddab4b394 471 Gene3D G3DSA:3.40.50.720 1 91 9.7E-29 T 15-10-2018 D934_02140 d8ce633cea1617ce1048dcfddab4b394 471 Pfam PF01225 Mur ligase family, catalytic domain 4 98 1.8E-13 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 D934_02140 d8ce633cea1617ce1048dcfddab4b394 471 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 402 3.9E-9 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 D934_02140 d8ce633cea1617ce1048dcfddab4b394 471 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 2 471 54.652 T 15-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 D934_02140 d8ce633cea1617ce1048dcfddab4b394 471 Pfam PF08245 Mur ligase middle domain 109 313 5.4E-24 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D934_05600 ee675a67de4a5bb360d073d0d45f882d 420 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 291 394 1.8E-32 T 15-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 D934_05600 ee675a67de4a5bb360d073d0d45f882d 420 PIRSF PIRSF038885 7 419 4.7E-135 T 15-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 D934_05600 ee675a67de4a5bb360d073d0d45f882d 420 SUPERFAMILY SSF81648 294 409 1.14E-25 T 15-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 D934_05600 ee675a67de4a5bb360d073d0d45f882d 420 SUPERFAMILY SSF81342 24 293 5.34E-83 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 D934_05600 ee675a67de4a5bb360d073d0d45f882d 420 Pfam PF00033 Cytochrome b/b6/petB 32 219 3.3E-64 T 15-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 D934_05600 ee675a67de4a5bb360d073d0d45f882d 420 Gene3D G3DSA:1.20.810.10 6 419 1.7E-130 T 15-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 D934_01860 f807487feb8083ef536c9c4861727ae7 344 Gene3D G3DSA:1.20.970.10 1 72 2.2E-28 T 15-10-2018 D934_01860 f807487feb8083ef536c9c4861727ae7 344 SUPERFAMILY SSF47648 3 71 6.02E-17 T 15-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 D934_01860 f807487feb8083ef536c9c4861727ae7 344 SUPERFAMILY SSF52418 78 339 2.22E-93 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 D934_01860 f807487feb8083ef536c9c4861727ae7 344 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 336 8.7E-124 T 15-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 D934_01860 f807487feb8083ef536c9c4861727ae7 344 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 68 1.1E-11 T 15-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 D934_01860 f807487feb8083ef536c9c4861727ae7 344 Pfam PF00591 Glycosyl transferase family, a/b domain 77 327 9.8E-90 T 15-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 D934_01860 f807487feb8083ef536c9c4861727ae7 344 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 36.908 T 15-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 D934_01860 f807487feb8083ef536c9c4861727ae7 344 Gene3D G3DSA:3.40.1030.10 73 341 1.4E-103 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 D934_01055 4ba626974681955abce0f6047b666b7f 400 Gene3D G3DSA:3.40.640.10 62 303 1.3E-150 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D934_01055 4ba626974681955abce0f6047b666b7f 400 Gene3D G3DSA:3.90.1150.10 7 394 1.3E-150 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D934_01055 4ba626974681955abce0f6047b666b7f 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 15-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 D934_01055 4ba626974681955abce0f6047b666b7f 400 PRINTS PR00799 Aspartate aminotransferase signature 208 220 1.1E-35 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D934_01055 4ba626974681955abce0f6047b666b7f 400 PRINTS PR00799 Aspartate aminotransferase signature 343 361 1.1E-35 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D934_01055 4ba626974681955abce0f6047b666b7f 400 PRINTS PR00799 Aspartate aminotransferase signature 276 301 1.1E-35 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D934_01055 4ba626974681955abce0f6047b666b7f 400 PRINTS PR00799 Aspartate aminotransferase signature 177 196 1.1E-35 T 15-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D934_01055 4ba626974681955abce0f6047b666b7f 400 SUPERFAMILY SSF53383 3 397 3.22E-110 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D934_01055 4ba626974681955abce0f6047b666b7f 400 Pfam PF00155 Aminotransferase class I and II 28 394 6.8E-74 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D934_04020 65b0e40db64fed91fa8a0755163ea79e 347 Pfam PF06723 MreB/Mbl protein 11 339 2.0E-150 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D934_04020 65b0e40db64fed91fa8a0755163ea79e 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 8.7E-160 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D934_04020 65b0e40db64fed91fa8a0755163ea79e 347 SUPERFAMILY SSF53067 9 153 2.07E-38 T 15-10-2018 D934_04020 65b0e40db64fed91fa8a0755163ea79e 347 Gene3D G3DSA:3.90.640.10 191 264 8.7E-130 T 15-10-2018 D934_04020 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 4.7E-62 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D934_04020 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 4.7E-62 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D934_04020 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 4.7E-62 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D934_04020 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 4.7E-62 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D934_04020 65b0e40db64fed91fa8a0755163ea79e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 4.7E-62 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D934_04020 65b0e40db64fed91fa8a0755163ea79e 347 SUPERFAMILY SSF53067 155 340 5.81E-48 T 15-10-2018 D934_04020 65b0e40db64fed91fa8a0755163ea79e 347 Gene3D G3DSA:3.30.420.40 14 332 8.7E-130 T 15-10-2018 D934_04020 65b0e40db64fed91fa8a0755163ea79e 347 Gene3D G3DSA:3.30.420.40 159 322 8.7E-130 T 15-10-2018 D934_04020 65b0e40db64fed91fa8a0755163ea79e 347 SMART SM00268 10 345 0.0086 T 15-10-2018 IPR004000 Actin family D934_08780 888366fc4fade2c4638ece1ddecdc853 317 SUPERFAMILY SSF53613 1 311 4.05E-57 T 15-10-2018 IPR029056 Ribokinase-like D934_08780 888366fc4fade2c4638ece1ddecdc853 317 PRINTS PR00990 Ribokinase signature 224 235 1.2E-18 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 D934_08780 888366fc4fade2c4638ece1ddecdc853 317 PRINTS PR00990 Ribokinase signature 171 186 1.2E-18 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 D934_08780 888366fc4fade2c4638ece1ddecdc853 317 PRINTS PR00990 Ribokinase signature 102 115 1.2E-18 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 D934_08780 888366fc4fade2c4638ece1ddecdc853 317 PRINTS PR00990 Ribokinase signature 6 27 1.2E-18 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 D934_08780 888366fc4fade2c4638ece1ddecdc853 317 Gene3D G3DSA:3.40.1190.20 1 316 1.5E-73 T 15-10-2018 IPR029056 Ribokinase-like D934_08780 888366fc4fade2c4638ece1ddecdc853 317 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 261 274 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 D934_08780 888366fc4fade2c4638ece1ddecdc853 317 Pfam PF00294 pfkB family carbohydrate kinase 1 310 2.8E-45 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB D934_08780 888366fc4fade2c4638ece1ddecdc853 317 Hamap MF_01987 Ribokinase [rbsK]. 2 317 20.58 T 15-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 D934_02650 0c63fa0b2aa7b7d1e65301622dc5de95 663 SUPERFAMILY SSF49785 407 633 2.76E-73 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily D934_02650 0c63fa0b2aa7b7d1e65301622dc5de95 663 SMART SM00939 365 629 5.9E-83 T 15-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 D934_02650 0c63fa0b2aa7b7d1e65301622dc5de95 663 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 49 634 5.2E-72 T 15-10-2018 IPR005674 CocE/Serine esterase GO:0016787 D934_02650 0c63fa0b2aa7b7d1e65301622dc5de95 663 SUPERFAMILY SSF53474 37 400 1.95E-46 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_02650 0c63fa0b2aa7b7d1e65301622dc5de95 663 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 52 338 3.3E-72 T 15-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 D934_02650 0c63fa0b2aa7b7d1e65301622dc5de95 663 Gene3D G3DSA:2.60.120.260 394 632 3.4E-76 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily D934_02650 0c63fa0b2aa7b7d1e65301622dc5de95 663 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 379 629 2.0E-37 T 15-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 D934_02650 0c63fa0b2aa7b7d1e65301622dc5de95 663 Gene3D G3DSA:1.10.3020.10 208 283 5.3E-125 T 15-10-2018 D934_02650 0c63fa0b2aa7b7d1e65301622dc5de95 663 Gene3D G3DSA:3.40.50.1820 42 393 5.3E-125 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 SMART SM00490 460 546 3.1E-20 T 15-10-2018 IPR001650 Helicase, C-terminal D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 SUPERFAMILY SSF52540 4 415 3.1E-127 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 Gene3D G3DSA:3.40.50.300 415 596 2.0E-50 T 15-10-2018 D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 Pfam PF04851 Type III restriction enzyme, res subunit 16 92 1.5E-8 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 Pfam PF02151 UvrB/uvrC motif 635 665 1.3E-8 T 15-10-2018 IPR001943 UVR domain GO:0005515 D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 SUPERFAMILY SSF52540 36 583 8.43E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 Pfam PF00271 Helicase conserved C-terminal domain 440 544 1.0E-18 T 15-10-2018 IPR001650 Helicase, C-terminal D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 SMART SM00487 9 426 1.1E-25 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 SUPERFAMILY SSF46600 621 665 1.44E-11 T 15-10-2018 IPR036876 UVR domain superfamily D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 Gene3D G3DSA:4.10.860.10 613 668 5.5E-15 T 15-10-2018 D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 Gene3D G3DSA:3.40.50.300 268 414 2.8E-49 T 15-10-2018 D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 15-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 42.3 T 15-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.1E-21 T 15-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain D934_05360 a7c672cae454400b88a8e7d4d7e74a66 669 Gene3D G3DSA:3.40.50.300 1 239 1.1E-69 T 15-10-2018 D934_05825 9d6ca71ef60f5329883483cf76088297 206 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 119 200 3.1E-26 T 15-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 D934_05825 9d6ca71ef60f5329883483cf76088297 206 SUPERFAMILY SSF141734 12 113 5.23E-42 T 15-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 D934_05825 9d6ca71ef60f5329883483cf76088297 206 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 202 2.5E-11 T 15-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 D934_05825 9d6ca71ef60f5329883483cf76088297 206 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 1.0E-23 T 15-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 D934_05825 9d6ca71ef60f5329883483cf76088297 206 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 115 201 17.393 T 15-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 D934_05825 9d6ca71ef60f5329883483cf76088297 206 Gene3D G3DSA:1.10.287.1080 115 206 3.2E-25 T 15-10-2018 D934_05825 9d6ca71ef60f5329883483cf76088297 206 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 206 35.214 T 15-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 D934_05825 9d6ca71ef60f5329883483cf76088297 206 SUPERFAMILY SSF101386 117 205 3.27E-20 T 15-10-2018 D934_05825 9d6ca71ef60f5329883483cf76088297 206 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 9.3E-30 T 15-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 D934_05825 9d6ca71ef60f5329883483cf76088297 206 Gene3D G3DSA:3.10.20.400 9 102 1.5E-33 T 15-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 D934_09200 7f8ad9c2b5c12ae975f0682343c155ec 407 Pfam PF02486 Replication initiation factor 186 366 3.0E-32 T 15-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 D934_07305 3a612d0efddac7d7ac900b2175d0d0ee 172 Gene3D G3DSA:3.10.420.10 3 167 4.8E-53 T 15-10-2018 IPR035958 SecB-like superfamily D934_07305 3a612d0efddac7d7ac900b2175d0d0ee 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 23 40 4.1E-36 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D934_07305 3a612d0efddac7d7ac900b2175d0d0ee 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 107 129 4.1E-36 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D934_07305 3a612d0efddac7d7ac900b2175d0d0ee 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 133 151 4.1E-36 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D934_07305 3a612d0efddac7d7ac900b2175d0d0ee 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 83 103 4.1E-36 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D934_07305 3a612d0efddac7d7ac900b2175d0d0ee 172 Pfam PF02556 Preprotein translocase subunit SecB 18 153 2.1E-51 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D934_07305 3a612d0efddac7d7ac900b2175d0d0ee 172 Hamap MF_00821 Protein-export protein SecB [secB]. 1 155 31.28 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D934_07305 3a612d0efddac7d7ac900b2175d0d0ee 172 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 19 151 3.8E-46 T 15-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D934_07305 3a612d0efddac7d7ac900b2175d0d0ee 172 SUPERFAMILY SSF54611 19 150 9.81E-46 T 15-10-2018 IPR035958 SecB-like superfamily D934_02830 b400021b5e4e0c6eaf61a7cb2f67fe08 131 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 118 1.6E-24 T 15-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02830 b400021b5e4e0c6eaf61a7cb2f67fe08 131 PIRSF PIRSF000178 1 125 3.0E-37 T 15-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02830 b400021b5e4e0c6eaf61a7cb2f67fe08 131 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 122 7.2E-37 T 15-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02830 b400021b5e4e0c6eaf61a7cb2f67fe08 131 SUPERFAMILY SSF81343 3 124 5.89E-32 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02830 b400021b5e4e0c6eaf61a7cb2f67fe08 131 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 6 30 - T 15-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02830 b400021b5e4e0c6eaf61a7cb2f67fe08 131 Gene3D G3DSA:1.20.1300.10 1 125 8.9E-35 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_00030 39058397026c05b664b514d271d8f581 446 SMART SM00388 214 278 5.8E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_00030 39058397026c05b664b514d271d8f581 446 Gene3D G3DSA:1.10.287.130 209 279 8.4E-24 T 15-10-2018 D934_00030 39058397026c05b664b514d271d8f581 446 Gene3D G3DSA:3.30.565.10 280 440 1.3E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_00030 39058397026c05b664b514d271d8f581 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 277 8.1E-19 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_00030 39058397026c05b664b514d271d8f581 446 Pfam PF11808 Domain of unknown function (DUF3329) 14 97 1.5E-15 T 15-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 D934_00030 39058397026c05b664b514d271d8f581 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 429 1.2E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_00030 39058397026c05b664b514d271d8f581 446 SUPERFAMILY SSF47384 201 278 9.81E-20 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D934_00030 39058397026c05b664b514d271d8f581 446 SMART SM00387 321 433 6.0E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_00030 39058397026c05b664b514d271d8f581 446 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 102 429 1.0E-120 T 15-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 D934_00030 39058397026c05b664b514d271d8f581 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 4.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_00030 39058397026c05b664b514d271d8f581 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 4.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_00030 39058397026c05b664b514d271d8f581 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 4.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_00030 39058397026c05b664b514d271d8f581 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 430 4.4E-12 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_00030 39058397026c05b664b514d271d8f581 446 SUPERFAMILY SSF55785 91 205 1.64E-5 T 15-10-2018 IPR035965 PAS domain superfamily D934_00030 39058397026c05b664b514d271d8f581 446 SUPERFAMILY SSF55874 267 429 3.8E-38 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_11825 e3d258608ea71d644d85be951b3a54d4 118 Pfam PF00535 Glycosyl transferase family 2 1 68 1.2E-9 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D934_11825 e3d258608ea71d644d85be951b3a54d4 118 Gene3D G3DSA:3.90.550.10 1 118 9.6E-10 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_11825 e3d258608ea71d644d85be951b3a54d4 118 SUPERFAMILY SSF53448 1 108 1.69E-10 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_05090 270d3d9a18f47b7506905c39bf5ef610 392 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 109 281 1.2E-34 T 15-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain D934_05090 270d3d9a18f47b7506905c39bf5ef610 392 Pfam PF17482 Phage tail sheath C-terminal domain 282 383 1.4E-19 T 15-10-2018 IPR020287 Tail sheath protein, C-terminal domain D934_02925 270d3d9a18f47b7506905c39bf5ef610 392 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 109 281 1.2E-34 T 15-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain D934_02925 270d3d9a18f47b7506905c39bf5ef610 392 Pfam PF17482 Phage tail sheath C-terminal domain 282 383 1.4E-19 T 15-10-2018 IPR020287 Tail sheath protein, C-terminal domain D934_00345 c9e6cd7a4b7e23a38c0a5e79cc061770 614 Gene3D G3DSA:3.40.50.300 80 282 7.3E-18 T 15-10-2018 D934_00345 c9e6cd7a4b7e23a38c0a5e79cc061770 614 Gene3D G3DSA:3.40.50.300 357 550 6.5E-15 T 15-10-2018 D934_00345 c9e6cd7a4b7e23a38c0a5e79cc061770 614 Pfam PF13538 UvrD-like helicase C-terminal domain 470 522 1.5E-11 T 15-10-2018 IPR027785 UvrD-like helicase C-terminal domain D934_00345 c9e6cd7a4b7e23a38c0a5e79cc061770 614 SUPERFAMILY SSF52540 81 527 5.17E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_09545 62f657f898959f0b575f54b352de571f 315 Gene3D G3DSA:3.40.50.12780 2 184 4.2E-36 T 15-10-2018 D934_09545 62f657f898959f0b575f54b352de571f 315 Pfam PF00501 AMP-binding enzyme 26 144 5.5E-6 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D934_09545 62f657f898959f0b575f54b352de571f 315 SUPERFAMILY SSF56801 15 232 9.68E-19 T 15-10-2018 D934_02420 8f1abe991cfa2bb6660846053d4ea8e9 449 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 309 332 - T 15-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site D934_02420 8f1abe991cfa2bb6660846053d4ea8e9 449 SUPERFAMILY SSF118215 23 416 1.03E-110 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D934_02420 8f1abe991cfa2bb6660846053d4ea8e9 449 Pfam PF00375 Sodium:dicarboxylate symporter family 23 415 2.4E-99 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 D934_02420 8f1abe991cfa2bb6660846053d4ea8e9 449 PRINTS PR00173 Glutamate-aspartate symporter signature 341 360 2.0E-35 T 15-10-2018 D934_02420 8f1abe991cfa2bb6660846053d4ea8e9 449 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 2.0E-35 T 15-10-2018 D934_02420 8f1abe991cfa2bb6660846053d4ea8e9 449 PRINTS PR00173 Glutamate-aspartate symporter signature 88 113 2.0E-35 T 15-10-2018 D934_02420 8f1abe991cfa2bb6660846053d4ea8e9 449 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 2.0E-35 T 15-10-2018 D934_02420 8f1abe991cfa2bb6660846053d4ea8e9 449 PRINTS PR00173 Glutamate-aspartate symporter signature 17 37 2.0E-35 T 15-10-2018 D934_02420 8f1abe991cfa2bb6660846053d4ea8e9 449 PRINTS PR00173 Glutamate-aspartate symporter signature 232 251 2.0E-35 T 15-10-2018 D934_02420 8f1abe991cfa2bb6660846053d4ea8e9 449 PRINTS PR00173 Glutamate-aspartate symporter signature 306 332 2.0E-35 T 15-10-2018 D934_02420 8f1abe991cfa2bb6660846053d4ea8e9 449 PRINTS PR00173 Glutamate-aspartate symporter signature 58 78 2.0E-35 T 15-10-2018 D934_02420 8f1abe991cfa2bb6660846053d4ea8e9 449 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 50 65 - T 15-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site D934_02420 8f1abe991cfa2bb6660846053d4ea8e9 449 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 16 442 37.523 T 15-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 D934_02420 8f1abe991cfa2bb6660846053d4ea8e9 449 Gene3D G3DSA:1.10.3860.10 14 430 9.2E-113 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D934_07275 30350120d3e9e1b287adc1d747c78d11 317 Pfam PF08279 HTH domain 14 53 1.1E-5 T 15-10-2018 IPR013196 Helix-turn-helix, type 11 D934_07275 30350120d3e9e1b287adc1d747c78d11 317 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 314 1.6E-45 T 15-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D934_07275 30350120d3e9e1b287adc1d747c78d11 317 Pfam PF02237 Biotin protein ligase C terminal domain 273 315 3.3E-8 T 15-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D934_07275 30350120d3e9e1b287adc1d747c78d11 317 Gene3D G3DSA:3.30.930.10 62 268 6.7E-50 T 15-10-2018 D934_07275 30350120d3e9e1b287adc1d747c78d11 317 SUPERFAMILY SSF50037 271 315 3.52E-6 T 15-10-2018 IPR008988 Transcriptional repressor, C-terminal D934_07275 30350120d3e9e1b287adc1d747c78d11 317 Gene3D G3DSA:1.10.10.10 3 59 2.5E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_07275 30350120d3e9e1b287adc1d747c78d11 317 Gene3D G3DSA:2.30.30.100 270 317 4.4E-9 T 15-10-2018 D934_07275 30350120d3e9e1b287adc1d747c78d11 317 SUPERFAMILY SSF55681 82 266 2.98E-46 T 15-10-2018 D934_07275 30350120d3e9e1b287adc1d747c78d11 317 Pfam PF03099 Biotin/lipoate A/B protein ligase family 103 205 1.0E-10 T 15-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 D934_09585 647c8e79ad8641fa27cc758e360cd001 288 SUPERFAMILY SSF54675 2 114 1.81E-32 T 15-10-2018 D934_09585 647c8e79ad8641fa27cc758e360cd001 288 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 15 281 2.9E-96 T 15-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 D934_09585 647c8e79ad8641fa27cc758e360cd001 288 Gene3D G3DSA:3.20.20.70 129 271 1.2E-100 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_09585 647c8e79ad8641fa27cc758e360cd001 288 Gene3D G3DSA:3.90.1170.20 18 279 1.2E-100 T 15-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 D934_09585 647c8e79ad8641fa27cc758e360cd001 288 PIRSF PIRSF006250 8 284 1.6E-93 T 15-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 D934_09585 647c8e79ad8641fa27cc758e360cd001 288 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 115 280 3.3E-58 T 15-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 D934_09585 647c8e79ad8641fa27cc758e360cd001 288 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 26 113 8.7E-27 T 15-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 D934_09585 647c8e79ad8641fa27cc758e360cd001 288 SUPERFAMILY SSF51690 115 281 8.63E-58 T 15-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 D934_04455 eb16b8574f21a1905ca6d6bcd1930692 251 Gene3D G3DSA:2.10.109.10 115 246 2.2E-11 T 15-10-2018 D934_04455 eb16b8574f21a1905ca6d6bcd1930692 251 Gene3D G3DSA:1.10.260.40 1 69 4.5E-17 T 15-10-2018 D934_04455 eb16b8574f21a1905ca6d6bcd1930692 251 SUPERFAMILY SSF47413 1 68 7.6E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_04455 eb16b8574f21a1905ca6d6bcd1930692 251 Pfam PF00717 Peptidase S24-like 154 214 1.4E-8 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D934_04455 eb16b8574f21a1905ca6d6bcd1930692 251 SMART SM00530 6 64 2.2E-13 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_04455 eb16b8574f21a1905ca6d6bcd1930692 251 Pfam PF13560 Helix-turn-helix domain 3 64 3.5E-13 T 15-10-2018 D934_04455 eb16b8574f21a1905ca6d6bcd1930692 251 SUPERFAMILY SSF51306 112 244 9.55E-22 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 427 40.993 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 Gene3D G3DSA:3.40.50.1980 31 232 1.6E-118 T 15-10-2018 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 15-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 Gene3D G3DSA:3.40.50.1980 234 349 1.6E-118 T 15-10-2018 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 SUPERFAMILY SSF53720 3 427 3.92E-78 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 PIRSF PIRSF000099 1 430 7.4E-158 T 15-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 Pfam PF00815 Histidinol dehydrogenase 26 427 1.8E-161 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 8.4E-91 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 8.4E-91 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 8.4E-91 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 8.4E-91 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 PRINTS PR00083 Histidinol dehydrogenase signature 199 224 8.4E-91 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 PRINTS PR00083 Histidinol dehydrogenase signature 169 195 8.4E-91 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 8.4E-91 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 8.4E-91 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D934_05855 41e8568c0944851d5809cb0af8a9c67e 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 426 6.4E-159 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D934_04295 5304e84188a1205665edacdfb94a5ada 308 PIRSF PIRSF037167 1 303 4.0E-123 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 D934_04295 5304e84188a1205665edacdfb94a5ada 308 Gene3D G3DSA:1.10.8.10 11 101 1.8E-8 T 15-10-2018 D934_04295 5304e84188a1205665edacdfb94a5ada 308 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D934_04295 5304e84188a1205665edacdfb94a5ada 308 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 9 290 4.1E-114 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 D934_04295 5304e84188a1205665edacdfb94a5ada 308 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 290 6.3E-67 T 15-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 D934_04295 5304e84188a1205665edacdfb94a5ada 308 Pfam PF05175 Methyltransferase small domain 130 213 2.3E-13 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 D934_04295 5304e84188a1205665edacdfb94a5ada 308 SUPERFAMILY SSF53335 12 289 1.02E-40 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_04295 5304e84188a1205665edacdfb94a5ada 308 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 2 296 47.891 T 15-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 D934_04295 5304e84188a1205665edacdfb94a5ada 308 Gene3D G3DSA:3.40.50.150 105 291 3.8E-38 T 15-10-2018 D934_12670 39fed6624ddd863c270e48794275ccfe 128 SUPERFAMILY SSF160472 3 121 2.62E-42 T 15-10-2018 IPR023138 NMB0513-like superfamily D934_12670 39fed6624ddd863c270e48794275ccfe 128 Gene3D G3DSA:1.10.3510.10 8 126 5.8E-22 T 15-10-2018 IPR023138 NMB0513-like superfamily D934_12670 39fed6624ddd863c270e48794275ccfe 128 Pfam PF04591 Protein of unknown function, DUF596 59 128 1.1E-27 T 15-10-2018 IPR007670 Protein of unknown function DUF596 D934_13410 266809e13621cb7f00002c3e493a80e0 119 Gene3D G3DSA:1.10.1900.20 56 118 3.9E-28 T 15-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13410 266809e13621cb7f00002c3e493a80e0 119 Pfam PF00453 Ribosomal protein L20 3 109 3.0E-48 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13410 266809e13621cb7f00002c3e493a80e0 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13410 266809e13621cb7f00002c3e493a80e0 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 1.0E-21 T 15-10-2018 D934_13410 266809e13621cb7f00002c3e493a80e0 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 5.7E-38 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13410 266809e13621cb7f00002c3e493a80e0 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 5.7E-38 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13410 266809e13621cb7f00002c3e493a80e0 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 5.7E-38 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13410 266809e13621cb7f00002c3e493a80e0 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 4.2E-48 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13410 266809e13621cb7f00002c3e493a80e0 119 Gene3D G3DSA:1.10.720.90 2 55 2.9E-21 T 15-10-2018 D934_13410 266809e13621cb7f00002c3e493a80e0 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.182 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13410 266809e13621cb7f00002c3e493a80e0 119 SUPERFAMILY SSF74731 3 117 5.34E-49 T 15-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1024 1037 4.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 PRINTS PR00344 Bacterial sensor protein C-terminal signature 982 992 4.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 PRINTS PR00344 Bacterial sensor protein C-terminal signature 964 978 4.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1000 1018 4.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 SUPERFAMILY SSF47384 800 878 1.71E-17 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 SUPERFAMILY SSF63829 40 246 1.24E-10 T 15-10-2018 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 SUPERFAMILY SSF55874 866 1038 3.67E-45 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 Pfam PF07495 Y_Y_Y domain 696 757 2.4E-13 T 15-10-2018 IPR011123 Two component regulator three Y D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 Gene3D G3DSA:1.10.287.130 785 875 2.5E-23 T 15-10-2018 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 SUPERFAMILY SSF63829 397 643 1.03E-10 T 15-10-2018 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 Pfam PF00512 His Kinase A (phospho-acceptor) domain 812 877 6.5E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 Gene3D G3DSA:2.130.10.10 355 644 2.2E-29 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 Gene3D G3DSA:3.30.565.10 876 1040 2.8E-49 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 Pfam PF00072 Response regulator receiver domain 1065 1172 7.1E-20 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 SMART SM00388 812 877 2.5E-21 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 Gene3D G3DSA:2.130.10.10 33 331 1.1E-40 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 Pfam PF07494 Two component regulator propeller 42 65 8.3E-4 T 15-10-2018 IPR011110 Two component regulator propeller D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 Pfam PF07494 Two component regulator propeller 177 198 0.0041 T 15-10-2018 IPR011110 Two component regulator propeller D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 924 1038 2.4E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 SMART SM00387 924 1040 9.6E-34 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 Gene3D G3DSA:3.40.50.2300 1058 1185 1.2E-28 T 15-10-2018 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 SUPERFAMILY SSF52172 1060 1179 3.13E-30 T 15-10-2018 IPR011006 CheY-like superfamily D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 SMART SM00448 1062 1173 1.1E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_04125 7fcb95e91fca6670a1aee1b02072eb88 1190 Gene3D G3DSA:2.60.40.10 663 768 3.6E-14 T 15-10-2018 IPR013783 Immunoglobulin-like fold D934_02725 85928f11061c4a63b8ec09f81139fb55 394 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 384 6.1E-137 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D934_02725 85928f11061c4a63b8ec09f81139fb55 394 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 8 136 4.2E-41 T 15-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D934_02725 85928f11061c4a63b8ec09f81139fb55 394 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 8 386 45.084 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D934_02725 85928f11061c4a63b8ec09f81139fb55 394 SUPERFAMILY SSF51735 6 154 8.07E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_02725 85928f11061c4a63b8ec09f81139fb55 394 Gene3D G3DSA:3.40.50.720 1 154 7.8E-47 T 15-10-2018 D934_02725 85928f11061c4a63b8ec09f81139fb55 394 PIRSF PIRSF006205 5 390 7.1E-152 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D934_02725 85928f11061c4a63b8ec09f81139fb55 394 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 150 233 3.8E-39 T 15-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D934_02725 85928f11061c4a63b8ec09f81139fb55 394 Pfam PF13288 DXP reductoisomerase C-terminal domain 265 381 3.3E-38 T 15-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D934_02725 85928f11061c4a63b8ec09f81139fb55 394 SUPERFAMILY SSF69055 295 386 2.35E-29 T 15-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D934_02725 85928f11061c4a63b8ec09f81139fb55 394 SUPERFAMILY SSF55347 130 268 1.6E-58 T 15-10-2018 D934_02725 85928f11061c4a63b8ec09f81139fb55 394 Gene3D G3DSA:1.10.1740.10 306 390 1.8E-27 T 15-10-2018 D934_04790 2c43a2d2eb030ae03b2923198be00604 454 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 56 358 5.2E-94 T 15-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 D934_04790 2c43a2d2eb030ae03b2923198be00604 454 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 11 454 1.2E-210 T 15-10-2018 IPR011556 Glutamate--cysteine ligase, plant-type GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 D934_04790 2c43a2d2eb030ae03b2923198be00604 454 SUPERFAMILY SSF55931 27 445 2.75E-67 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 D934_04790 2c43a2d2eb030ae03b2923198be00604 454 PIRSF PIRSF017901 2 454 6.1E-184 T 15-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 D934_04790 2c43a2d2eb030ae03b2923198be00604 454 Gene3D G3DSA:3.30.590.20 4 454 3.0E-177 T 15-10-2018 D934_06150 225ad9f932434a26d6c320c3394832df 231 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 152 229 2.9E-23 T 15-10-2018 IPR006260 TonB/TolA, C-terminal D934_06150 225ad9f932434a26d6c320c3394832df 231 SUPERFAMILY SSF74653 145 227 2.75E-20 T 15-10-2018 D934_06150 225ad9f932434a26d6c320c3394832df 231 Gene3D G3DSA:3.30.1150.10 125 229 1.5E-23 T 15-10-2018 D934_06150 225ad9f932434a26d6c320c3394832df 231 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 150 228 2.2E-22 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 D934_11270 8ee8f178116025d31ef181e8bb4e2195 315 SUPERFAMILY SSF82114 175 310 8.28E-42 T 15-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 D934_11270 8ee8f178116025d31ef181e8bb4e2195 315 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 306 2.4E-77 T 15-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 D934_11270 8ee8f178116025d31ef181e8bb4e2195 315 SMART SM00904 184 307 1.4E-54 T 15-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 D934_11270 8ee8f178116025d31ef181e8bb4e2195 315 PIRSF PIRSF004491 9 313 2.2E-89 T 15-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 D934_11270 8ee8f178116025d31ef181e8bb4e2195 315 Gene3D G3DSA:2.40.30.30 187 314 4.6E-38 T 15-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 D934_11270 8ee8f178116025d31ef181e8bb4e2195 315 Pfam PF01687 Riboflavin kinase 185 306 3.6E-34 T 15-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 D934_11270 8ee8f178116025d31ef181e8bb4e2195 315 Gene3D G3DSA:3.40.50.620 11 186 9.4E-53 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_11270 8ee8f178116025d31ef181e8bb4e2195 315 Pfam PF06574 FAD synthetase 15 167 6.0E-47 T 15-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 D934_11270 8ee8f178116025d31ef181e8bb4e2195 315 SUPERFAMILY SSF52374 19 176 4.22E-28 T 15-10-2018 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 SMART SM00382 349 495 9.3E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 714 733 1.0E-52 T 15-10-2018 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 737 755 1.0E-52 T 15-10-2018 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 606 622 1.0E-52 T 15-10-2018 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 684 703 1.0E-52 T 15-10-2018 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 357 376 1.0E-52 T 15-10-2018 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 201 1.1E-36 T 15-10-2018 IPR003111 Lon, substrate-binding domain D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 Gene3D G3DSA:1.20.58.1480 122 246 1.4E-42 T 15-10-2018 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 Gene3D G3DSA:3.40.50.300 314 491 3.4E-63 T 15-10-2018 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 SUPERFAMILY SSF54211 606 781 4.93E-56 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 Gene3D G3DSA:1.10.8.60 492 595 8.6E-30 T 15-10-2018 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 Gene3D G3DSA:3.30.230.10 596 783 1.4E-77 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 SUPERFAMILY SSF88697 10 202 2.39E-44 T 15-10-2018 IPR015947 PUA-like superfamily D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 581 783 1.8E-91 T 15-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 TIGRFAM TIGR00763 lon: endopeptidase La 13 782 5.1E-301 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 353 489 1.1E-18 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 PIRSF PIRSF001174 1 785 0.0 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 Gene3D G3DSA:2.30.130.40 1 115 3.3E-31 T 15-10-2018 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 SMART SM00464 10 203 1.1E-67 T 15-10-2018 IPR003111 Lon, substrate-binding domain D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 Hamap MF_01973 Lon protease [lon]. 11 783 69.966 T 15-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 687 695 - T 15-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 D934_03505 08bc69ff4a4dacb498fbf282de9bbca8 823 SUPERFAMILY SSF52540 317 596 5.7E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_03225 2d250ddc1485ced1531d8b582c6c1b6d 189 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 9 177 21.591 T 15-10-2018 IPR006839 Ribosome-associated, YjgA D934_03225 2d250ddc1485ced1531d8b582c6c1b6d 189 SUPERFAMILY SSF158710 34 177 1.26E-40 T 15-10-2018 IPR023153 PSPTO4464-like domain superfamily D934_03225 2d250ddc1485ced1531d8b582c6c1b6d 189 Pfam PF04751 Protein of unknown function (DUF615) 20 173 7.7E-42 T 15-10-2018 IPR006839 Ribosome-associated, YjgA D934_03225 2d250ddc1485ced1531d8b582c6c1b6d 189 Gene3D G3DSA:1.10.60.30 30 104 2.9E-20 T 15-10-2018 D934_03225 2d250ddc1485ced1531d8b582c6c1b6d 189 Gene3D G3DSA:1.10.60.30 107 180 4.8E-23 T 15-10-2018 D934_03225 2d250ddc1485ced1531d8b582c6c1b6d 189 PIRSF PIRSF016183 2 181 3.9E-61 T 15-10-2018 IPR006839 Ribosome-associated, YjgA D934_12445 70c0d4b08947b7bbe2642a7939313dc0 472 SUPERFAMILY SSF52540 2 202 1.8E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_12445 70c0d4b08947b7bbe2642a7939313dc0 472 SUPERFAMILY SSF52540 117 455 3.54E-26 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_12445 70c0d4b08947b7bbe2642a7939313dc0 472 Gene3D G3DSA:3.40.50.10810 4 228 4.0E-23 T 15-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily D934_12445 70c0d4b08947b7bbe2642a7939313dc0 472 SMART SM00487 2 195 1.5E-6 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_12445 70c0d4b08947b7bbe2642a7939313dc0 472 Pfam PF00176 SNF2 family N-terminal domain 25 264 4.7E-16 T 15-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 D934_12445 70c0d4b08947b7bbe2642a7939313dc0 472 Gene3D G3DSA:3.40.50.300 243 469 3.2E-17 T 15-10-2018 D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 Gene3D G3DSA:3.40.50.300 589 828 7.1E-231 T 15-10-2018 D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 SUPERFAMILY SSF52540 829 1037 5.78E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 SUPERFAMILY SSF52540 570 830 1.23E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 Gene3D G3DSA:3.40.50.11180 28 346 2.4E-106 T 15-10-2018 D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 27 1160 27.808 T 15-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 Pfam PF00271 Helicase conserved C-terminal domain 857 956 5.6E-16 T 15-10-2018 IPR001650 Helicase, C-terminal D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 SMART SM00487 647 837 2.5E-34 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 Gene3D G3DSA:3.40.50.300 526 1037 7.1E-231 T 15-10-2018 D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 SMART SM00982 1056 1156 2.2E-45 T 15-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 SMART SM00490 873 957 5.0E-18 T 15-10-2018 IPR001650 Helicase, C-terminal D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 153 1130 0.0 T 15-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 SUPERFAMILY SSF143517 1049 1193 1.57E-39 T 15-10-2018 IPR037235 TRCF-like, C-terminal domain D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 Pfam PF02559 CarD-like/TRCF domain 527 620 1.5E-24 T 15-10-2018 IPR003711 CarD-like/TRCF domain D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 Gene3D G3DSA:3.40.50.11140 369 443 1.9E-7 T 15-10-2018 D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 Pfam PF03461 TRCF domain 1057 1148 8.4E-25 T 15-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 Gene3D G3DSA:2.30.30.840 530 588 7.1E-231 T 15-10-2018 D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 SUPERFAMILY SSF52540 369 512 1.13E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 Gene3D G3DSA:3.30.2060.10 135 220 2.4E-106 T 15-10-2018 D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 SUPERFAMILY SSF52540 20 352 3.19E-89 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 Pfam PF00270 DEAD/DEAH box helicase 652 809 1.1E-16 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 Gene3D G3DSA:3.90.1150.50 1053 1194 1.2E-38 T 15-10-2018 IPR037235 TRCF-like, C-terminal domain D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 SMART SM01058 526 623 4.2E-48 T 15-10-2018 IPR003711 CarD-like/TRCF domain D934_01090 38b3fcb908f4c44c359246c2ce0e8858 1195 SUPERFAMILY SSF141259 518 595 2.48E-21 T 15-10-2018 IPR036101 CarD-like/TRCF domain superfamily D934_13085 6ef0f2896bd2481705997dd81601ea79 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 305 1.4E-98 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 D934_13085 6ef0f2896bd2481705997dd81601ea79 467 Gene3D G3DSA:3.40.50.620 2 314 6.3E-127 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_13085 6ef0f2896bd2481705997dd81601ea79 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_13085 6ef0f2896bd2481705997dd81601ea79 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 1.4E-167 T 15-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 D934_13085 6ef0f2896bd2481705997dd81601ea79 467 SUPERFAMILY SSF52374 4 296 1.96E-102 T 15-10-2018 D934_13085 6ef0f2896bd2481705997dd81601ea79 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 6.2E-24 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D934_13085 6ef0f2896bd2481705997dd81601ea79 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 6.2E-24 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D934_13085 6ef0f2896bd2481705997dd81601ea79 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 6.2E-24 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D934_13085 6ef0f2896bd2481705997dd81601ea79 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 6.2E-24 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D934_13085 6ef0f2896bd2481705997dd81601ea79 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 6.2E-24 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D934_13085 6ef0f2896bd2481705997dd81601ea79 467 Gene3D G3DSA:1.10.10.350 369 466 2.9E-23 T 15-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 D934_13085 6ef0f2896bd2481705997dd81601ea79 467 SUPERFAMILY SSF48163 299 461 9.94E-38 T 15-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 D934_13085 6ef0f2896bd2481705997dd81601ea79 467 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 30.022 T 15-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 D934_03800 04da0863359db97a0e4018ce45c1d176 285 SMART SM00342 196 279 1.9E-25 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D934_03800 04da0863359db97a0e4018ce45c1d176 285 Pfam PF12852 Cupin 11 165 1.1E-25 T 15-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain D934_03800 04da0863359db97a0e4018ce45c1d176 285 Gene3D G3DSA:1.10.10.60 239 285 2.6E-12 T 15-10-2018 D934_03800 04da0863359db97a0e4018ce45c1d176 285 Gene3D G3DSA:1.10.10.60 181 238 2.1E-11 T 15-10-2018 D934_03800 04da0863359db97a0e4018ce45c1d176 285 SUPERFAMILY SSF46689 232 281 7.17E-11 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D934_03800 04da0863359db97a0e4018ce45c1d176 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 233 275 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D934_03800 04da0863359db97a0e4018ce45c1d176 285 Pfam PF12833 Helix-turn-helix domain 202 281 1.5E-18 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D934_03800 04da0863359db97a0e4018ce45c1d176 285 SUPERFAMILY SSF46689 179 230 6.27E-8 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D934_02640 1474a0bc846558a3cd93ab3c15df818c 968 SUPERFAMILY SSF52743 77 405 3.27E-59 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D934_02640 1474a0bc846558a3cd93ab3c15df818c 968 Gene3D G3DSA:3.40.50.200 34 404 3.9E-61 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D934_02640 1474a0bc846558a3cd93ab3c15df818c 968 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 98 109 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site D934_02640 1474a0bc846558a3cd93ab3c15df818c 968 SMART SM00869 700 960 5.5E-23 T 15-10-2018 IPR005546 Autotransporter beta-domain D934_02640 1474a0bc846558a3cd93ab3c15df818c 968 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 434 465 9.9E-11 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat D934_02640 1474a0bc846558a3cd93ab3c15df818c 968 SUPERFAMILY SSF103515 666 964 2.75E-38 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily D934_02640 1474a0bc846558a3cd93ab3c15df818c 968 Pfam PF03797 Autotransporter beta-domain 704 939 2.0E-30 T 15-10-2018 IPR005546 Autotransporter beta-domain D934_02640 1474a0bc846558a3cd93ab3c15df818c 968 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 345 355 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site D934_02640 1474a0bc846558a3cd93ab3c15df818c 968 Gene3D G3DSA:2.40.128.130 657 966 6.7E-37 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily D934_02640 1474a0bc846558a3cd93ab3c15df818c 968 PRINTS PR00723 Subtilisin serine protease family (S8) signature 93 112 2.1E-14 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related D934_02640 1474a0bc846558a3cd93ab3c15df818c 968 PRINTS PR00723 Subtilisin serine protease family (S8) signature 133 146 2.1E-14 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related D934_02640 1474a0bc846558a3cd93ab3c15df818c 968 PRINTS PR00723 Subtilisin serine protease family (S8) signature 344 360 2.1E-14 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related D934_02640 1474a0bc846558a3cd93ab3c15df818c 968 Pfam PF12951 Passenger-associated-transport-repeat 435 464 1.6E-8 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat D934_02640 1474a0bc846558a3cd93ab3c15df818c 968 Pfam PF00082 Subtilase family 93 395 2.7E-39 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 D934_11595 a94b2f45b8f46ccfd7b6fd18ea72bacf 411 SUPERFAMILY SSF53901 2 251 3.46E-77 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_11595 a94b2f45b8f46ccfd7b6fd18ea72bacf 411 Gene3D G3DSA:3.40.47.10 256 400 1.5E-54 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_11595 a94b2f45b8f46ccfd7b6fd18ea72bacf 411 SMART SM00825 Beta-ketoacyl synthase 5 411 9.2E-16 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D934_11595 a94b2f45b8f46ccfd7b6fd18ea72bacf 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 245 8.4E-59 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D934_11595 a94b2f45b8f46ccfd7b6fd18ea72bacf 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 409 1.4E-195 T 15-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 D934_11595 a94b2f45b8f46ccfd7b6fd18ea72bacf 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 2.2E-39 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D934_11595 a94b2f45b8f46ccfd7b6fd18ea72bacf 411 SUPERFAMILY SSF53901 213 410 1.42E-73 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_11595 a94b2f45b8f46ccfd7b6fd18ea72bacf 411 Gene3D G3DSA:3.40.47.10 1 254 5.2E-87 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_11595 a94b2f45b8f46ccfd7b6fd18ea72bacf 411 PIRSF PIRSF000447 1 411 7.8E-184 T 15-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 D934_11595 a94b2f45b8f46ccfd7b6fd18ea72bacf 411 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site D934_02715 f0c904fa885edae9aba89820d91afab1 784 Gene3D G3DSA:3.10.20.310 352 427 1.4E-24 T 15-10-2018 D934_02715 f0c904fa885edae9aba89820d91afab1 784 Gene3D G3DSA:3.10.20.310 181 270 2.4E-19 T 15-10-2018 D934_02715 f0c904fa885edae9aba89820d91afab1 784 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 8 784 24.971 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 D934_02715 f0c904fa885edae9aba89820d91afab1 784 Gene3D G3DSA:2.40.160.50 432 784 9.3E-105 T 15-10-2018 D934_02715 f0c904fa885edae9aba89820d91afab1 784 Gene3D G3DSA:3.10.20.310 24 97 6.3E-21 T 15-10-2018 D934_02715 f0c904fa885edae9aba89820d91afab1 784 Gene3D G3DSA:3.10.20.310 98 179 2.2E-18 T 15-10-2018 D934_02715 f0c904fa885edae9aba89820d91afab1 784 Pfam PF07244 Surface antigen variable number repeat 99 178 2.9E-13 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D934_02715 f0c904fa885edae9aba89820d91afab1 784 Pfam PF07244 Surface antigen variable number repeat 353 426 2.0E-15 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D934_02715 f0c904fa885edae9aba89820d91afab1 784 Pfam PF07244 Surface antigen variable number repeat 33 97 2.0E-4 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D934_02715 f0c904fa885edae9aba89820d91afab1 784 Pfam PF07244 Surface antigen variable number repeat 272 347 4.6E-10 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D934_02715 f0c904fa885edae9aba89820d91afab1 784 Pfam PF07244 Surface antigen variable number repeat 182 269 1.2E-11 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D934_02715 f0c904fa885edae9aba89820d91afab1 784 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 31 784 5.6E-244 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 D934_02715 f0c904fa885edae9aba89820d91afab1 784 Gene3D G3DSA:3.10.20.310 271 351 1.3E-16 T 15-10-2018 D934_02715 f0c904fa885edae9aba89820d91afab1 784 Pfam PF01103 Surface antigen 454 784 1.9E-89 T 15-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 D934_02715 f0c904fa885edae9aba89820d91afab1 784 PIRSF PIRSF006076 1 784 1.5E-249 T 15-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 D934_03350 548338aaa4e00ac46e1a3847f0656d22 239 SUPERFAMILY SSF54814 2 106 2.51E-33 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 D934_03350 548338aaa4e00ac46e1a3847f0656d22 239 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 35.903 T 15-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 D934_03350 548338aaa4e00ac46e1a3847f0656d22 239 SUPERFAMILY SSF54821 108 206 1.23E-35 T 15-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03350 548338aaa4e00ac46e1a3847f0656d22 239 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 207 2.8E-85 T 15-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 D934_03350 548338aaa4e00ac46e1a3847f0656d22 239 SMART SM00322 60 125 2.4E-5 T 15-10-2018 IPR004087 K Homology domain GO:0003676 D934_03350 548338aaa4e00ac46e1a3847f0656d22 239 Gene3D G3DSA:3.30.1140.32 108 208 1.6E-38 T 15-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03350 548338aaa4e00ac46e1a3847f0656d22 239 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 201 6.8E-35 T 15-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03350 548338aaa4e00ac46e1a3847f0656d22 239 Gene3D G3DSA:3.30.300.20 17 107 1.9E-25 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta D934_03350 548338aaa4e00ac46e1a3847f0656d22 239 Pfam PF07650 KH domain 38 111 8.8E-18 T 15-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 Gene3D G3DSA:3.30.70.1320 142 331 6.0E-231 T 15-10-2018 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 Gene3D G3DSA:1.20.1640.10 18 506 6.0E-231 T 15-10-2018 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 SUPERFAMILY SSF82714 710 795 5.36E-12 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 Gene3D G3DSA:3.30.70.1430 45 805 6.0E-231 T 15-10-2018 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 SUPERFAMILY SSF82714 190 271 2.35E-13 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 Gene3D G3DSA:3.30.2090.10 184 273 6.0E-231 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 Pfam PF00873 AcrB/AcrD/AcrF family 9 1010 8.3E-150 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 Gene3D G3DSA:1.20.1640.10 507 1009 6.0E-231 T 15-10-2018 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 SUPERFAMILY SSF82693 143 328 8.37E-16 T 15-10-2018 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 Gene3D G3DSA:3.30.70.1440 658 857 6.0E-231 T 15-10-2018 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 SUPERFAMILY SSF82866 298 493 4.19E-36 T 15-10-2018 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 Gene3D G3DSA:3.30.2090.10 709 797 6.0E-231 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 SUPERFAMILY SSF82866 793 1016 1.44E-41 T 15-10-2018 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 SUPERFAMILY SSF82693 45 139 1.08E-14 T 15-10-2018 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 Gene3D G3DSA:3.30.70.1430 558 657 6.0E-231 T 15-10-2018 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 5.5E-19 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 5.5E-19 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 5.5E-19 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 5.5E-19 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_10090 f865db9c4348c199a31a26fc6832fb43 1020 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 5.5E-19 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_08645 3921eb5e609188c20148db199785c785 98 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 90 4.8E-7 T 15-10-2018 IPR009241 Toxin HigB-like D934_08645 3921eb5e609188c20148db199785c785 98 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 4 94 3.2E-41 T 15-10-2018 IPR014056 Addiction module killer protein, predicted D934_08645 3921eb5e609188c20148db199785c785 98 PIRSF PIRSF028744 1 98 1.0E-40 T 15-10-2018 IPR014056 Addiction module killer protein, predicted D934_12320 3921eb5e609188c20148db199785c785 98 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 90 4.8E-7 T 15-10-2018 IPR009241 Toxin HigB-like D934_12320 3921eb5e609188c20148db199785c785 98 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 4 94 3.2E-41 T 15-10-2018 IPR014056 Addiction module killer protein, predicted D934_12320 3921eb5e609188c20148db199785c785 98 PIRSF PIRSF028744 1 98 1.0E-40 T 15-10-2018 IPR014056 Addiction module killer protein, predicted D934_06755 3921eb5e609188c20148db199785c785 98 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 90 4.8E-7 T 15-10-2018 IPR009241 Toxin HigB-like D934_06755 3921eb5e609188c20148db199785c785 98 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 4 94 3.2E-41 T 15-10-2018 IPR014056 Addiction module killer protein, predicted D934_06755 3921eb5e609188c20148db199785c785 98 PIRSF PIRSF028744 1 98 1.0E-40 T 15-10-2018 IPR014056 Addiction module killer protein, predicted D934_09970 1cebaeebd9c135602fc6b80ca293821c 442 Gene3D G3DSA:3.40.350.10 8 176 5.4E-57 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D934_09970 1cebaeebd9c135602fc6b80ca293821c 442 SUPERFAMILY SSF53092 7 179 3.14E-56 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D934_09970 1cebaeebd9c135602fc6b80ca293821c 442 Pfam PF00557 Metallopeptidase family M24 187 417 5.4E-56 T 15-10-2018 IPR000994 Peptidase M24 D934_09970 1cebaeebd9c135602fc6b80ca293821c 442 Pfam PF05195 Aminopeptidase P, N-terminal domain 12 131 2.2E-39 T 15-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 D934_09970 1cebaeebd9c135602fc6b80ca293821c 442 Gene3D G3DSA:3.90.230.10 177 441 1.3E-86 T 15-10-2018 D934_09970 1cebaeebd9c135602fc6b80ca293821c 442 SMART SM01011 7 141 1.5E-68 T 15-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 D934_09970 1cebaeebd9c135602fc6b80ca293821c 442 PRINTS PR00599 Methionine aminopeptidase-1 signature 235 248 1.7E-7 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D934_09970 1cebaeebd9c135602fc6b80ca293821c 442 PRINTS PR00599 Methionine aminopeptidase-1 signature 375 387 1.7E-7 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D934_09970 1cebaeebd9c135602fc6b80ca293821c 442 PRINTS PR00599 Methionine aminopeptidase-1 signature 257 273 1.7E-7 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D934_09970 1cebaeebd9c135602fc6b80ca293821c 442 SUPERFAMILY SSF55920 182 438 6.28E-77 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like D934_12860 7dbc4e7ff2b89398bedc54a8f7bcce4b 345 Gene3D G3DSA:3.30.70.260 253 344 3.8E-14 T 15-10-2018 D934_12860 7dbc4e7ff2b89398bedc54a8f7bcce4b 345 SUPERFAMILY SSF52540 11 250 8.25E-83 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_12860 7dbc4e7ff2b89398bedc54a8f7bcce4b 345 Pfam PF09383 NIL domain 272 341 8.9E-17 T 15-10-2018 IPR018449 NIL domain D934_12860 7dbc4e7ff2b89398bedc54a8f7bcce4b 345 Gene3D G3DSA:3.40.50.300 5 252 2.9E-75 T 15-10-2018 D934_12860 7dbc4e7ff2b89398bedc54a8f7bcce4b 345 Pfam PF00005 ABC transporter 31 179 1.1E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_12860 7dbc4e7ff2b89398bedc54a8f7bcce4b 345 SMART SM00930 270 343 8.7E-23 T 15-10-2018 IPR018449 NIL domain D934_12860 7dbc4e7ff2b89398bedc54a8f7bcce4b 345 SMART SM00382 40 227 1.6E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_12860 7dbc4e7ff2b89398bedc54a8f7bcce4b 345 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_12860 7dbc4e7ff2b89398bedc54a8f7bcce4b 345 SUPERFAMILY SSF55021 270 343 2.52E-14 T 15-10-2018 D934_12515 34fe6ab1e1ec5bd75fa0c0b7412ddae8 210 SMART SM00479 21 206 2.0E-19 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D934_12515 34fe6ab1e1ec5bd75fa0c0b7412ddae8 210 Pfam PF00929 Exonuclease 23 197 5.1E-24 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D934_12515 34fe6ab1e1ec5bd75fa0c0b7412ddae8 210 Hamap MF_00157 Ribonuclease T [rnt]. 1 210 85.944 T 15-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 D934_12515 34fe6ab1e1ec5bd75fa0c0b7412ddae8 210 SUPERFAMILY SSF53098 11 204 6.17E-52 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_12515 34fe6ab1e1ec5bd75fa0c0b7412ddae8 210 TIGRFAM TIGR01298 RNaseT: ribonuclease T 13 209 3.5E-111 T 15-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 D934_12515 34fe6ab1e1ec5bd75fa0c0b7412ddae8 210 Gene3D G3DSA:3.30.420.10 12 207 1.7E-46 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D934_13405 85c222f162ccf727c610cdb4c32fdd76 333 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 41 332 9.9E-102 T 15-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 D934_13405 85c222f162ccf727c610cdb4c32fdd76 333 Pfam PF01409 tRNA synthetases class II core domain (F) 94 332 6.2E-104 T 15-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 D934_13405 85c222f162ccf727c610cdb4c32fdd76 333 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 89 9.5E-21 T 15-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 D934_13405 85c222f162ccf727c610cdb4c32fdd76 333 Gene3D G3DSA:3.30.930.10 10 333 8.9E-115 T 15-10-2018 D934_13405 85c222f162ccf727c610cdb4c32fdd76 333 SUPERFAMILY SSF46589 14 101 1.78E-19 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 D934_13405 85c222f162ccf727c610cdb4c32fdd76 333 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 10 332 48.29 T 15-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 D934_13405 85c222f162ccf727c610cdb4c32fdd76 333 SUPERFAMILY SSF55681 94 332 5.17E-81 T 15-10-2018 D934_09690 73c1c3162f2c45222fc9e13032327352 432 SUPERFAMILY SSF53623 4 283 2.86E-86 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D934_09690 73c1c3162f2c45222fc9e13032327352 432 Gene3D G3DSA:3.90.190.20 286 422 4.2E-23 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D934_09690 73c1c3162f2c45222fc9e13032327352 432 SUPERFAMILY SSF53244 286 421 8.06E-25 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D934_09690 73c1c3162f2c45222fc9e13032327352 432 Gene3D G3DSA:3.40.1190.10 1 285 3.1E-86 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D934_09690 73c1c3162f2c45222fc9e13032327352 432 PIRSF PIRSF001563 1 424 6.9E-100 T 15-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 D934_09690 73c1c3162f2c45222fc9e13032327352 432 Pfam PF08245 Mur ligase middle domain 48 191 1.2E-9 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D934_09690 73c1c3162f2c45222fc9e13032327352 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 416 6.9E-95 T 15-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 D934_10085 487bb24c6a5b1198d1e8d667722551c5 268 Gene3D G3DSA:3.40.50.720 2 251 2.2E-66 T 15-10-2018 D934_10085 487bb24c6a5b1198d1e8d667722551c5 268 Pfam PF00106 short chain dehydrogenase 5 186 5.8E-53 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_10085 487bb24c6a5b1198d1e8d667722551c5 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.2E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_10085 487bb24c6a5b1198d1e8d667722551c5 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 4.2E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_10085 487bb24c6a5b1198d1e8d667722551c5 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 4.2E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_10085 487bb24c6a5b1198d1e8d667722551c5 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 4.2E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_10085 487bb24c6a5b1198d1e8d667722551c5 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 4.2E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_10085 487bb24c6a5b1198d1e8d667722551c5 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 1.7E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_10085 487bb24c6a5b1198d1e8d667722551c5 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.7E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_10085 487bb24c6a5b1198d1e8d667722551c5 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.7E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_10085 487bb24c6a5b1198d1e8d667722551c5 268 SUPERFAMILY SSF51735 4 254 2.64E-62 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_13850 c9e4fd811014b3eb1ec9a840552406fa 132 Gene3D G3DSA:3.30.70.240 7 83 2.2E-10 T 15-10-2018 D934_05365 6ea0b78d64b0c8aca3a7a24c8cd8b5f6 195 SUPERFAMILY SSF54523 8 147 1.41E-16 T 15-10-2018 D934_05365 6ea0b78d64b0c8aca3a7a24c8cd8b5f6 195 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.1E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_05365 6ea0b78d64b0c8aca3a7a24c8cd8b5f6 195 Pfam PF12019 Type II transport protein GspH 48 159 3.1E-14 T 15-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 D934_05365 6ea0b78d64b0c8aca3a7a24c8cd8b5f6 195 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.7E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_05365 6ea0b78d64b0c8aca3a7a24c8cd8b5f6 195 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_05365 6ea0b78d64b0c8aca3a7a24c8cd8b5f6 195 Gene3D G3DSA:3.30.700.10 7 149 1.5E-7 T 15-10-2018 D934_13640 b07e7f632a6210e22d5b74e81ec9251f 235 SMART SM00014 104 213 1.2E-12 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase D934_13640 b07e7f632a6210e22d5b74e81ec9251f 235 Pfam PF01569 PAP2 superfamily 109 218 4.6E-17 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase D934_13640 b07e7f632a6210e22d5b74e81ec9251f 235 Gene3D G3DSA:1.20.144.10 135 233 2.9E-19 T 15-10-2018 D934_13640 b07e7f632a6210e22d5b74e81ec9251f 235 Gene3D G3DSA:1.20.144.10 17 134 3.3E-6 T 15-10-2018 D934_13640 b07e7f632a6210e22d5b74e81ec9251f 235 SUPERFAMILY SSF48317 19 225 9.55E-36 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily D934_12355 6098ee8e3bfbaa7cb39c6b236423e5f3 108 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 14 100 2.5E-24 T 15-10-2018 IPR009241 Toxin HigB-like D934_07380 05d551ce05c9dae78f93f3da973ebc1a 685 Pfam PF01841 Transglutaminase-like superfamily 368 473 2.9E-26 T 15-10-2018 IPR002931 Transglutaminase-like D934_07380 05d551ce05c9dae78f93f3da973ebc1a 685 Pfam PF11992 Domain of unknown function (DUF3488) 17 327 4.5E-72 T 15-10-2018 IPR021878 Protein of unknown function DUF3488 D934_07380 05d551ce05c9dae78f93f3da973ebc1a 685 SUPERFAMILY SSF54001 277 584 9.7E-60 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily D934_07380 05d551ce05c9dae78f93f3da973ebc1a 685 SMART SM00460 404 475 1.0E-18 T 15-10-2018 IPR002931 Transglutaminase-like D934_07380 05d551ce05c9dae78f93f3da973ebc1a 685 Gene3D G3DSA:3.10.620.30 343 497 7.7E-24 T 15-10-2018 D934_13165 e659a31fa2e422a7fad33cd5bb84e34f 320 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 20 319 1.2E-105 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13165 e659a31fa2e422a7fad33cd5bb84e34f 320 SUPERFAMILY SSF52440 20 114 5.18E-25 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D934_13165 e659a31fa2e422a7fad33cd5bb84e34f 320 Pfam PF07478 D-ala D-ala ligase C-terminus 122 317 3.1E-53 T 15-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13165 e659a31fa2e422a7fad33cd5bb84e34f 320 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 19 320 34.122 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13165 e659a31fa2e422a7fad33cd5bb84e34f 320 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 261 290 - T 15-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13165 e659a31fa2e422a7fad33cd5bb84e34f 320 Gene3D G3DSA:3.40.50.20 8 102 1.1E-25 T 15-10-2018 D934_13165 e659a31fa2e422a7fad33cd5bb84e34f 320 SUPERFAMILY SSF56059 114 318 4.65E-47 T 15-10-2018 D934_13165 e659a31fa2e422a7fad33cd5bb84e34f 320 Gene3D G3DSA:3.30.1490.20 129 197 1.5E-68 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D934_13165 e659a31fa2e422a7fad33cd5bb84e34f 320 Gene3D G3DSA:3.30.470.20 103 316 1.5E-68 T 15-10-2018 D934_13165 e659a31fa2e422a7fad33cd5bb84e34f 320 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 81 92 - T 15-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13165 e659a31fa2e422a7fad33cd5bb84e34f 320 PIRSF PIRSF039102 59 320 5.3E-79 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13165 e659a31fa2e422a7fad33cd5bb84e34f 320 PIRSF PIRSF039102 18 59 3.1E-7 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13165 e659a31fa2e422a7fad33cd5bb84e34f 320 Pfam PF01820 D-ala D-ala ligase N-terminus 20 104 2.2E-14 T 15-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_07505 7b863af45b1a2a649f25d907d47f2dbc 283 PIRSF PIRSF028477 3 283 2.3E-130 T 15-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 D934_07505 7b863af45b1a2a649f25d907d47f2dbc 283 Pfam PF09916 Uncharacterized protein conserved in bacteria (DUF2145) 54 256 8.9E-74 T 15-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 SUPERFAMILY SSF55271 2 112 1.19E-41 T 15-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 Gene3D G3DSA:3.40.1170.10 1 118 4.9E-48 T 15-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 SMART SM00534 603 795 1.4E-106 T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 SUPERFAMILY SSF48334 264 561 1.57E-84 T 15-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily D934_07210 42afc0b66d1613688feae4484d8a0c11 858 Pfam PF05188 MutS domain II 126 249 2.2E-29 T 15-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 Pfam PF05190 MutS family domain IV 424 514 4.0E-29 T 15-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 4 855 0.0 T 15-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 PIRSF PIRSF037677 213 840 6.0E-118 T 15-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 PIRSF PIRSF037677 1 186 1.4E-24 T 15-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 Pfam PF01624 MutS domain I 5 116 2.3E-40 T 15-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 SUPERFAMILY SSF52540 563 799 3.44E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_07210 42afc0b66d1613688feae4484d8a0c11 858 SMART SM00533 280 587 2.5E-97 T 15-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 Gene3D G3DSA:3.30.420.110 125 257 2.3E-37 T 15-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 4 850 24.666 T 15-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 Pfam PF05192 MutS domain III 266 555 6.2E-40 T 15-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 Gene3D G3DSA:3.40.50.300 564 853 1.1E-95 T 15-10-2018 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 Pfam PF00488 MutS domain V 606 798 1.0E-81 T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 684 700 - T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 Gene3D G3DSA:1.10.1420.10 383 499 3.0E-96 T 15-10-2018 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 SUPERFAMILY SSF53150 111 263 3.66E-41 T 15-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 D934_07210 42afc0b66d1613688feae4484d8a0c11 858 Gene3D G3DSA:1.10.1420.10 263 555 3.0E-96 T 15-10-2018 D934_02495 d7f3da0b49e4dcdface9e7d1fe50cd45 414 Pfam PF05977 Transmembrane secretion effector 18 401 2.6E-33 T 15-10-2018 IPR010290 Transmembrane secretion effector D934_02495 d7f3da0b49e4dcdface9e7d1fe50cd45 414 Gene3D G3DSA:1.20.1250.20 19 401 3.9E-32 T 15-10-2018 D934_02495 d7f3da0b49e4dcdface9e7d1fe50cd45 414 SUPERFAMILY SSF103473 22 412 7.06E-39 T 15-10-2018 IPR036259 MFS transporter superfamily D934_05615 05df2ed15a42811991b12ee6f9815dc4 497 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 48 495 71.177 T 15-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 D934_05615 05df2ed15a42811991b12ee6f9815dc4 497 Pfam PF01938 TRAM domain 433 494 1.9E-18 T 15-10-2018 IPR002792 TRAM domain D934_05615 05df2ed15a42811991b12ee6f9815dc4 497 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 196 216 - T 15-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 D934_05615 05df2ed15a42811991b12ee6f9815dc4 497 Gene3D G3DSA:3.40.50.12160 49 183 8.6E-33 T 15-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily D934_05615 05df2ed15a42811991b12ee6f9815dc4 497 Pfam PF00919 Uncharacterized protein family UPF0004 49 149 1.9E-28 T 15-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 D934_05615 05df2ed15a42811991b12ee6f9815dc4 497 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 49 492 6.4E-144 T 15-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 D934_05615 05df2ed15a42811991b12ee6f9815dc4 497 SMART SM00729 192 418 5.4E-54 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D934_05615 05df2ed15a42811991b12ee6f9815dc4 497 Gene3D G3DSA:3.80.30.20 190 436 6.9E-79 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe D934_05615 05df2ed15a42811991b12ee6f9815dc4 497 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 49 494 3.9E-178 T 15-10-2018 D934_05615 05df2ed15a42811991b12ee6f9815dc4 497 Pfam PF04055 Radical SAM superfamily 196 380 5.0E-26 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D934_05615 05df2ed15a42811991b12ee6f9815dc4 497 SUPERFAMILY SSF102114 168 426 1.15E-58 T 15-10-2018 D934_04365 989d73439ddffc3bde08bea362fd09a9 180 ProSitePatterns PS00819 Dps protein family signature 2. 85 99 - T 15-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 D934_04365 989d73439ddffc3bde08bea362fd09a9 180 SUPERFAMILY SSF47240 22 180 1.62E-46 T 15-10-2018 IPR009078 Ferritin-like superfamily D934_04365 989d73439ddffc3bde08bea362fd09a9 180 Gene3D G3DSA:1.20.1260.10 11 180 9.8E-57 T 15-10-2018 IPR012347 Ferritin-like D934_04365 989d73439ddffc3bde08bea362fd09a9 180 ProSitePatterns PS00818 Dps protein family signature 1. 59 75 - T 15-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 D934_04365 989d73439ddffc3bde08bea362fd09a9 180 PIRSF PIRSF005900 17 180 2.5E-46 T 15-10-2018 IPR002177 DNA-binding protein Dps D934_04365 989d73439ddffc3bde08bea362fd09a9 180 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 59 75 1.6E-12 T 15-10-2018 IPR002177 DNA-binding protein Dps D934_04365 989d73439ddffc3bde08bea362fd09a9 180 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 83 99 1.6E-12 T 15-10-2018 IPR002177 DNA-binding protein Dps D934_04365 989d73439ddffc3bde08bea362fd09a9 180 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 157 175 1.6E-12 T 15-10-2018 IPR002177 DNA-binding protein Dps D934_04365 989d73439ddffc3bde08bea362fd09a9 180 Pfam PF00210 Ferritin-like domain 40 180 2.0E-28 T 15-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 D934_02115 d25bdcd06d22506691aa3aaadbe7ea0b 395 PRINTS PR01035 Tetracycline resistance protein signature 29 45 9.4E-5 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D934_02115 d25bdcd06d22506691aa3aaadbe7ea0b 395 PRINTS PR01035 Tetracycline resistance protein signature 172 192 9.4E-5 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D934_02115 d25bdcd06d22506691aa3aaadbe7ea0b 395 PRINTS PR01035 Tetracycline resistance protein signature 115 136 9.4E-5 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D934_02115 d25bdcd06d22506691aa3aaadbe7ea0b 395 PRINTS PR01035 Tetracycline resistance protein signature 337 360 9.4E-5 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D934_02115 d25bdcd06d22506691aa3aaadbe7ea0b 395 Gene3D G3DSA:1.20.1250.20 16 206 2.8E-8 T 15-10-2018 D934_02115 d25bdcd06d22506691aa3aaadbe7ea0b 395 SUPERFAMILY SSF103473 17 384 1.83E-31 T 15-10-2018 IPR036259 MFS transporter superfamily D934_02115 d25bdcd06d22506691aa3aaadbe7ea0b 395 Gene3D G3DSA:1.20.1250.20 212 391 2.6E-14 T 15-10-2018 D934_02115 d25bdcd06d22506691aa3aaadbe7ea0b 395 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 27 384 4.9E-130 T 15-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB D934_00975 88742ad85b5fbaf3bcb76f419f12736f 795 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 338 506 9.9E-17 T 15-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 D934_00975 88742ad85b5fbaf3bcb76f419f12736f 795 Gene3D G3DSA:2.140.10.30 237 533 1.4E-27 T 15-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily D934_00975 88742ad85b5fbaf3bcb76f419f12736f 795 SUPERFAMILY SSF82171 98 538 9.42E-33 T 15-10-2018 D934_00975 88742ad85b5fbaf3bcb76f419f12736f 795 Pfam PF00326 Prolyl oligopeptidase family 599 794 7.0E-44 T 15-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 D934_00975 88742ad85b5fbaf3bcb76f419f12736f 795 SUPERFAMILY SSF53474 537 794 6.04E-62 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_00975 88742ad85b5fbaf3bcb76f419f12736f 795 Gene3D G3DSA:3.40.50.1820 534 791 2.0E-62 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_03115 36ac27b5f5795849de4656040153eb52 158 SUPERFAMILY SSF46557 4 76 5.75E-29 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 D934_03115 36ac27b5f5795849de4656040153eb52 158 SUPERFAMILY SSF54534 82 156 3.4E-22 T 15-10-2018 D934_03115 36ac27b5f5795849de4656040153eb52 158 Gene3D G3DSA:3.10.50.30 75 157 1.5E-28 T 15-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 D934_03115 36ac27b5f5795849de4656040153eb52 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 155 32.6 T 15-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 D934_03115 36ac27b5f5795849de4656040153eb52 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 4 155 4.3E-57 T 15-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 D934_03115 36ac27b5f5795849de4656040153eb52 158 Gene3D G3DSA:1.10.287.180 1 74 1.8E-31 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 D934_03115 36ac27b5f5795849de4656040153eb52 158 PIRSF PIRSF006092 1 158 5.2E-51 T 15-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 D934_03115 36ac27b5f5795849de4656040153eb52 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 6.5E-32 T 15-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 D934_03115 36ac27b5f5795849de4656040153eb52 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 16 47 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 D934_03115 36ac27b5f5795849de4656040153eb52 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 4.0E-26 T 15-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 D934_03840 625e08c0543ad315009c56e613b755f1 162 SUPERFAMILY SSF55811 3 138 3.52E-25 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D934_03840 625e08c0543ad315009c56e613b755f1 162 Gene3D G3DSA:3.90.79.10 9 153 5.6E-30 T 15-10-2018 D934_03840 625e08c0543ad315009c56e613b755f1 162 PRINTS PR01402 Mutator MutX protein signature 27 42 1.6E-7 T 15-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 D934_03840 625e08c0543ad315009c56e613b755f1 162 PRINTS PR01402 Mutator MutX protein signature 105 125 1.6E-7 T 15-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 D934_03840 625e08c0543ad315009c56e613b755f1 162 PRINTS PR01402 Mutator MutX protein signature 74 100 1.6E-7 T 15-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 D934_03840 625e08c0543ad315009c56e613b755f1 162 PRINTS PR01402 Mutator MutX protein signature 125 142 1.6E-7 T 15-10-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 D934_03840 625e08c0543ad315009c56e613b755f1 162 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D934_03840 625e08c0543ad315009c56e613b755f1 162 Pfam PF00293 NUDIX domain 13 134 5.1E-16 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D934_05010 f4bc02f6b72326ac955f1c97e6ab0b18 153 Gene3D G3DSA:1.10.10.10 1 141 1.8E-36 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_05010 f4bc02f6b72326ac955f1c97e6ab0b18 153 SUPERFAMILY SSF46785 3 134 8.89E-34 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_05010 f4bc02f6b72326ac955f1c97e6ab0b18 153 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 2.8E-53 T 15-10-2018 IPR014290 SUF system FeS cluster assembly regulator D934_05010 f4bc02f6b72326ac955f1c97e6ab0b18 153 Pfam PF02082 Transcriptional regulator 3 83 1.5E-22 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type D934_05010 f4bc02f6b72326ac955f1c97e6ab0b18 153 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 1.1E-29 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type D934_07945 a56be6e0d3f1e3ae750914b721458df8 403 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 400 55.326 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D934_07945 a56be6e0d3f1e3ae750914b721458df8 403 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 15-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D934_07945 a56be6e0d3f1e3ae750914b721458df8 403 SUPERFAMILY SSF55973 110 234 5.49E-46 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D934_07945 a56be6e0d3f1e3ae750914b721458df8 403 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 367 5.6E-177 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D934_07945 a56be6e0d3f1e3ae750914b721458df8 403 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 233 9.5E-42 T 15-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D934_07945 a56be6e0d3f1e3ae750914b721458df8 403 Gene3D G3DSA:3.30.300.10 11 272 1.3E-166 T 15-10-2018 D934_07945 a56be6e0d3f1e3ae750914b721458df8 403 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 101 1.9E-41 T 15-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D934_07945 a56be6e0d3f1e3ae750914b721458df8 403 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 366 4.2E-65 T 15-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D934_07945 a56be6e0d3f1e3ae750914b721458df8 403 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 15-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D934_07945 a56be6e0d3f1e3ae750914b721458df8 403 Gene3D G3DSA:3.30.300.10 5 235 1.3E-166 T 15-10-2018 D934_07945 a56be6e0d3f1e3ae750914b721458df8 403 Gene3D G3DSA:3.30.300.10 102 391 1.3E-166 T 15-10-2018 D934_07945 a56be6e0d3f1e3ae750914b721458df8 403 SUPERFAMILY SSF55973 235 400 1.18E-64 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D934_07945 a56be6e0d3f1e3ae750914b721458df8 403 PIRSF PIRSF000497 1 401 6.5E-166 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D934_07945 a56be6e0d3f1e3ae750914b721458df8 403 SUPERFAMILY SSF55973 3 109 7.46E-46 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D934_02840 a61a1e762692036b7bafc30d07b7b06f 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 46 55 - T 15-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02840 a61a1e762692036b7bafc30d07b7b06f 596 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 9 596 1.4E-287 T 15-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02840 a61a1e762692036b7bafc30d07b7b06f 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 596 1.5E-43 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02840 a61a1e762692036b7bafc30d07b7b06f 596 PIRSF PIRSF000171 1 585 6.8E-38 T 15-10-2018 D934_02840 a61a1e762692036b7bafc30d07b7b06f 596 SUPERFAMILY SSF51905 4 440 9.56E-77 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_02840 a61a1e762692036b7bafc30d07b7b06f 596 Gene3D G3DSA:3.90.700.10 250 353 8.9E-167 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02840 a61a1e762692036b7bafc30d07b7b06f 596 SUPERFAMILY SSF56425 240 358 3.59E-43 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02840 a61a1e762692036b7bafc30d07b7b06f 596 Gene3D G3DSA:4.10.80.40 548 596 1.5E-10 T 15-10-2018 D934_02840 a61a1e762692036b7bafc30d07b7b06f 596 SUPERFAMILY SSF46977 454 596 2.75E-50 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02840 a61a1e762692036b7bafc30d07b7b06f 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 12 596 1.3E-241 T 15-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02840 a61a1e762692036b7bafc30d07b7b06f 596 Gene3D G3DSA:1.20.58.100 437 547 3.3E-37 T 15-10-2018 D934_02840 a61a1e762692036b7bafc30d07b7b06f 596 Pfam PF00890 FAD binding domain 12 408 1.4E-121 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02840 a61a1e762692036b7bafc30d07b7b06f 596 Gene3D G3DSA:3.50.50.60 12 419 8.9E-167 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_00435 0a7500fdc4793ea9d652605d327b1571 733 SMART SM00487 196 392 9.3E-18 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_00435 0a7500fdc4793ea9d652605d327b1571 733 SMART SM00490 497 593 6.6E-9 T 15-10-2018 IPR001650 Helicase, C-terminal D934_00435 0a7500fdc4793ea9d652605d327b1571 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 23.01 T 15-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 D934_00435 0a7500fdc4793ea9d652605d327b1571 733 SUPERFAMILY SSF52540 465 618 2.76E-17 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00435 0a7500fdc4793ea9d652605d327b1571 733 Pfam PF00270 DEAD/DEAH box helicase 204 362 1.8E-12 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D934_00435 0a7500fdc4793ea9d652605d327b1571 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 8.1E-169 T 15-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 D934_00435 0a7500fdc4793ea9d652605d327b1571 733 Gene3D G3DSA:3.40.50.300 189 379 3.1E-71 T 15-10-2018 D934_00435 0a7500fdc4793ea9d652605d327b1571 733 SUPERFAMILY SSF52540 188 380 1.64E-36 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00435 0a7500fdc4793ea9d652605d327b1571 733 Pfam PF00271 Helicase conserved C-terminal domain 509 593 2.5E-5 T 15-10-2018 IPR001650 Helicase, C-terminal D934_00435 0a7500fdc4793ea9d652605d327b1571 733 Gene3D G3DSA:1.10.8.630 4 114 3.0E-29 T 15-10-2018 D934_04275 968e0bb0b1036a1a957136906e05122d 416 PIRSF PIRSF000813 1 408 1.2E-182 T 15-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 D934_04275 968e0bb0b1036a1a957136906e05122d 416 Gene3D G3DSA:3.30.460.10 1 122 2.2E-30 T 15-10-2018 D934_04275 968e0bb0b1036a1a957136906e05122d 416 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 213 2.3E-12 T 15-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 D934_04275 968e0bb0b1036a1a957136906e05122d 416 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 409 49.217 T 15-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 D934_04275 968e0bb0b1036a1a957136906e05122d 416 SUPERFAMILY SSF81301 2 120 2.18E-30 T 15-10-2018 D934_04275 968e0bb0b1036a1a957136906e05122d 416 Pfam PF01966 HD domain 232 348 5.8E-5 T 15-10-2018 IPR006674 HD domain D934_04275 968e0bb0b1036a1a957136906e05122d 416 Pfam PF01743 Poly A polymerase head domain 4 123 8.3E-21 T 15-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 D934_04275 968e0bb0b1036a1a957136906e05122d 416 SUPERFAMILY SSF81891 121 404 1.96E-52 T 15-10-2018 D934_04275 968e0bb0b1036a1a957136906e05122d 416 Gene3D G3DSA:1.10.3090.10 123 407 3.5E-43 T 15-10-2018 D934_03030 25245a9fdd1da8711bfcaf3275773dce 190 Gene3D G3DSA:2.40.128.110 25 181 3.5E-16 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D934_03030 25245a9fdd1da8711bfcaf3275773dce 190 Pfam PF04264 YceI-like domain 26 180 7.4E-16 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D934_03030 25245a9fdd1da8711bfcaf3275773dce 190 SMART SM00867 24 184 7.9E-16 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D934_03030 25245a9fdd1da8711bfcaf3275773dce 190 SUPERFAMILY SSF101874 22 184 1.44E-23 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D934_05490 89021ddfdb3b64f52082debc86d9499e 292 Pfam PF13525 Outer membrane lipoprotein 39 244 1.3E-57 T 15-10-2018 IPR039565 Outer membrane lipoprotein BamD-like D934_05490 89021ddfdb3b64f52082debc86d9499e 292 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 12 257 5.4E-81 T 15-10-2018 IPR017689 Outer membrane protein assembly factor BamD D934_05490 89021ddfdb3b64f52082debc86d9499e 292 Gene3D G3DSA:1.25.40.10 40 261 6.6E-55 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_05490 89021ddfdb3b64f52082debc86d9499e 292 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 10 251 36.238 T 15-10-2018 IPR017689 Outer membrane protein assembly factor BamD D934_05490 89021ddfdb3b64f52082debc86d9499e 292 SUPERFAMILY SSF48452 41 166 3.0E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_04300 1b523ad9eb6f95ed5d9467b666a83d60 372 SUPERFAMILY SSF103263 4 351 5.49E-139 T 15-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D934_04300 1b523ad9eb6f95ed5d9467b666a83d60 372 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D934_04300 1b523ad9eb6f95ed5d9467b666a83d60 372 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 35.007 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D934_04300 1b523ad9eb6f95ed5d9467b666a83d60 372 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D934_04300 1b523ad9eb6f95ed5d9467b666a83d60 372 TIGRFAM TIGR00033 aroC: chorismate synthase 11 350 4.3E-132 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D934_04300 1b523ad9eb6f95ed5d9467b666a83d60 372 Pfam PF01264 Chorismate synthase 11 345 1.5E-129 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D934_04300 1b523ad9eb6f95ed5d9467b666a83d60 372 Gene3D G3DSA:3.60.150.10 1 361 5.9E-144 T 15-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D934_04300 1b523ad9eb6f95ed5d9467b666a83d60 372 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D934_04300 1b523ad9eb6f95ed5d9467b666a83d60 372 PIRSF PIRSF001456 3 359 1.2E-129 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 SUPERFAMILY SSF55681 466 687 2.88E-46 T 15-10-2018 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 Pfam PF03483 B3/4 domain 212 384 4.1E-64 T 15-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 SMART SM00896 698 791 5.3E-37 T 15-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 SMART SM00873 211 384 9.6E-84 T 15-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 SMART SM00874 402 470 1.2E-26 T 15-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 2.1E-25 T 15-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 Gene3D G3DSA:2.40.50.140 39 153 7.4E-62 T 15-10-2018 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 SUPERFAMILY SSF46955 403 474 1.37E-17 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 Gene3D G3DSA:3.50.40.10 197 394 2.2E-70 T 15-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 1.6E-225 T 15-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 Gene3D G3DSA:3.30.56.10 4 180 7.4E-62 T 15-10-2018 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 Pfam PF03484 tRNA synthetase B5 domain 407 470 1.6E-17 T 15-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 45.312 T 15-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 Gene3D G3DSA:3.30.56.10 402 475 1.7E-23 T 15-10-2018 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 SUPERFAMILY SSF54991 693 791 1.29E-27 T 15-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 Gene3D G3DSA:3.30.930.10 488 689 3.4E-56 T 15-10-2018 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 SUPERFAMILY SSF50249 41 191 4.28E-40 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 Pfam PF01588 Putative tRNA binding domain 46 144 6.7E-22 T 15-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 Gene3D G3DSA:3.30.70.380 699 792 9.8E-25 T 15-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 D934_13400 87f3ef51e3eeb247158db3d0a5dd549d 792 SUPERFAMILY SSF56037 196 392 1.26E-68 T 15-10-2018 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 Gene3D G3DSA:3.40.50.300 146 340 6.6E-74 T 15-10-2018 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 SUPERFAMILY SSF81923 2 154 5.59E-37 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 SMART SM00382 595 768 6.0E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 SMART SM00382 196 342 2.3E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 Gene3D G3DSA:3.40.50.300 341 542 2.9E-69 T 15-10-2018 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 Gene3D G3DSA:1.10.8.60 767 859 2.2E-27 T 15-10-2018 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 629 647 - T 15-10-2018 IPR028299 ClpA/B, conserved site 2 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 15 66 4.7E-10 T 15-10-2018 IPR004176 Clp, N-terminal D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 2.0E-9 T 15-10-2018 IPR004176 Clp, N-terminal D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 594 761 1.4E-54 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 SUPERFAMILY SSF52540 157 543 4.31E-99 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 Gene3D G3DSA:1.10.1780.10 1 145 8.8E-31 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 847 3.2E-25 T 15-10-2018 IPR019489 Clp ATPase, C-terminal D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 SUPERFAMILY SSF52540 544 856 5.43E-82 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 292 304 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 1.2E-41 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 720 1.2E-41 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 1.2E-41 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 617 1.2E-41 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 Gene3D G3DSA:3.40.50.300 548 765 5.6E-85 T 15-10-2018 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 4 856 0.0 T 15-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 SMART SM01086 767 856 8.0E-37 T 15-10-2018 IPR019489 Clp ATPase, C-terminal D934_08845 4c26c4a9c4a3b86a4cc42327190165f2 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 334 5.6E-13 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D934_04685 bbedc241c7e934f19527ca2db0fa711d 290 SUPERFAMILY SSF52540 8 158 6.82E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04685 bbedc241c7e934f19527ca2db0fa711d 290 PIRSF PIRSF005052 6 290 2.9E-113 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 D934_04685 bbedc241c7e934f19527ca2db0fa711d 290 Gene3D G3DSA:3.40.50.300 1 146 1.3E-7 T 15-10-2018 D934_04685 bbedc241c7e934f19527ca2db0fa711d 290 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 6 290 37.686 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 D934_04685 bbedc241c7e934f19527ca2db0fa711d 290 Pfam PF03668 P-loop ATPase protein family 8 290 3.9E-93 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 D934_13135 c48317e0f2a390c68c5359865b64991e 319 Gene3D G3DSA:2.70.70.10 148 305 8.1E-45 T 15-10-2018 IPR011055 Duplicated hybrid motif D934_13135 c48317e0f2a390c68c5359865b64991e 319 Pfam PF01551 Peptidase family M23 204 298 2.2E-31 T 15-10-2018 IPR016047 Peptidase M23 D934_13135 c48317e0f2a390c68c5359865b64991e 319 SUPERFAMILY SSF51261 90 302 6.28E-56 T 15-10-2018 IPR011055 Duplicated hybrid motif D934_04025 2fd7ad5ac62525c7a386a9d8d1e9bc4a 316 Pfam PF04085 rod shape-determining protein MreC 133 274 8.6E-34 T 15-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 D934_04025 2fd7ad5ac62525c7a386a9d8d1e9bc4a 316 Gene3D G3DSA:2.40.10.350 187 262 9.0E-31 T 15-10-2018 D934_04025 2fd7ad5ac62525c7a386a9d8d1e9bc4a 316 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 18 275 2.2E-50 T 15-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 D934_04025 2fd7ad5ac62525c7a386a9d8d1e9bc4a 316 PIRSF PIRSF038471 15 277 9.7E-60 T 15-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 D934_04025 2fd7ad5ac62525c7a386a9d8d1e9bc4a 316 Gene3D G3DSA:2.40.10.340 129 272 9.0E-31 T 15-10-2018 D934_05335 a5ea74bbc224eedaaf4b301454feef3e 472 Gene3D G3DSA:3.40.50.10810 4 228 3.4E-23 T 15-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily D934_05335 a5ea74bbc224eedaaf4b301454feef3e 472 SUPERFAMILY SSF52540 117 455 6.08E-27 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_05335 a5ea74bbc224eedaaf4b301454feef3e 472 Gene3D G3DSA:3.40.50.300 243 469 3.1E-18 T 15-10-2018 D934_05335 a5ea74bbc224eedaaf4b301454feef3e 472 Pfam PF00176 SNF2 family N-terminal domain 25 263 5.5E-16 T 15-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 D934_05335 a5ea74bbc224eedaaf4b301454feef3e 472 SUPERFAMILY SSF52540 2 202 1.46E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_05335 a5ea74bbc224eedaaf4b301454feef3e 472 SMART SM00487 2 188 3.6E-7 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_13490 340b88bd73616c86b7af1dc9caac3aef 577 Gene3D G3DSA:3.30.450.90 176 300 1.4E-48 T 15-10-2018 D934_13490 340b88bd73616c86b7af1dc9caac3aef 577 SUPERFAMILY SSF52540 186 575 1.01E-98 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_13490 340b88bd73616c86b7af1dc9caac3aef 577 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 48 152 4.8E-19 T 15-10-2018 IPR007831 General secretory system II, protein E, N-terminal D934_13490 340b88bd73616c86b7af1dc9caac3aef 577 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 395 409 - T 15-10-2018 IPR001482 Type II/IV secretion system protein D934_13490 340b88bd73616c86b7af1dc9caac3aef 577 SUPERFAMILY SSF160246 11 148 1.1E-34 T 15-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily D934_13490 340b88bd73616c86b7af1dc9caac3aef 577 Pfam PF00437 Type II/IV secretion system protein 200 467 7.8E-89 T 15-10-2018 IPR001482 Type II/IV secretion system protein D934_13490 340b88bd73616c86b7af1dc9caac3aef 577 Gene3D G3DSA:3.30.300.160 69 149 5.2E-8 T 15-10-2018 D934_13490 340b88bd73616c86b7af1dc9caac3aef 577 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 15 577 1.4E-266 T 15-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 D934_13490 340b88bd73616c86b7af1dc9caac3aef 577 Gene3D G3DSA:3.40.50.300 302 577 6.7E-104 T 15-10-2018 D934_03270 f78ab011498599b85e612687b7b40174 191 PIRSF PIRSF026640 4 191 1.3E-69 T 15-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D934_03270 f78ab011498599b85e612687b7b40174 191 Gene3D G3DSA:1.20.1250.110 24 191 1.3E-52 T 15-10-2018 D934_03270 f78ab011498599b85e612687b7b40174 191 SMART SM00830 30 109 6.5E-12 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D934_03270 f78ab011498599b85e612687b7b40174 191 Pfam PF01817 Chorismate mutase type II 39 107 1.0E-6 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D934_03270 f78ab011498599b85e612687b7b40174 191 SUPERFAMILY SSF48600 37 190 6.41E-41 T 15-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D934_03270 f78ab011498599b85e612687b7b40174 191 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 33 145 1.7E-33 T 15-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D934_11080 14e916ea1220ee8081c77132c55ec286 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 353 4.8E-130 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 D934_11080 14e916ea1220ee8081c77132c55ec286 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 15-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 D934_11080 14e916ea1220ee8081c77132c55ec286 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 50.825 T 15-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 D934_11080 14e916ea1220ee8081c77132c55ec286 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 2.6E-151 T 15-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 D934_11080 14e916ea1220ee8081c77132c55ec286 357 SMART SM01329 4 353 1.2E-196 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 D934_11080 14e916ea1220ee8081c77132c55ec286 357 SUPERFAMILY SSF53659 1 357 2.16E-119 T 15-10-2018 D934_11080 14e916ea1220ee8081c77132c55ec286 357 Gene3D G3DSA:3.40.718.10 1 357 8.0E-145 T 15-10-2018 D934_01700 93d0453040d67fb4d91a132b52426234 534 Pfam PF00009 Elongation factor Tu GTP binding domain 11 276 4.2E-48 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_01700 93d0453040d67fb4d91a132b52426234 534 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 512 6.9E-46 T 15-10-2018 IPR032090 Peptide chain release factor 3, C-terminal D934_01700 93d0453040d67fb4d91a132b52426234 534 PRINTS PR00315 GTP-binding elongation factor signature 63 71 2.2E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_01700 93d0453040d67fb4d91a132b52426234 534 PRINTS PR00315 GTP-binding elongation factor signature 83 93 2.2E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_01700 93d0453040d67fb4d91a132b52426234 534 PRINTS PR00315 GTP-binding elongation factor signature 13 26 2.2E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_01700 93d0453040d67fb4d91a132b52426234 534 PRINTS PR00315 GTP-binding elongation factor signature 135 144 2.2E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_01700 93d0453040d67fb4d91a132b52426234 534 PRINTS PR00315 GTP-binding elongation factor signature 99 110 2.2E-11 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_01700 93d0453040d67fb4d91a132b52426234 534 SUPERFAMILY SSF52540 8 276 1.45E-84 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_01700 93d0453040d67fb4d91a132b52426234 534 Gene3D G3DSA:3.30.70.3280 388 527 4.0E-50 T 15-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily D934_01700 93d0453040d67fb4d91a132b52426234 534 SUPERFAMILY SSF54980 391 466 2.09E-16 T 15-10-2018 IPR035647 EF-G domain III/V-like D934_01700 93d0453040d67fb4d91a132b52426234 534 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site D934_01700 93d0453040d67fb4d91a132b52426234 534 Gene3D G3DSA:3.40.50.300 70 377 8.8E-108 T 15-10-2018 D934_01700 93d0453040d67fb4d91a132b52426234 534 SUPERFAMILY SSF50447 259 391 2.83E-29 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D934_01700 93d0453040d67fb4d91a132b52426234 534 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 151 1.2E-20 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D934_01700 93d0453040d67fb4d91a132b52426234 534 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 1 527 2.6E-246 T 15-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 D934_01700 93d0453040d67fb4d91a132b52426234 534 Gene3D G3DSA:3.40.50.300 108 273 8.8E-108 T 15-10-2018 D934_01700 93d0453040d67fb4d91a132b52426234 534 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 525 51.872 T 15-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 D934_13130 322f3bb7df031d803d2a3d608c554301 914 Gene3D G3DSA:3.90.1440.10 229 364 1.1E-177 T 15-10-2018 D934_13130 322f3bb7df031d803d2a3d608c554301 914 SUPERFAMILY SSF81767 227 364 1.29E-43 T 15-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 D934_13130 322f3bb7df031d803d2a3d608c554301 914 ProSitePatterns PS01312 SecA family signature. 496 511 - T 15-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 D934_13130 322f3bb7df031d803d2a3d608c554301 914 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 829 19.978 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D934_13130 322f3bb7df031d803d2a3d608c554301 914 SUPERFAMILY SSF81886 618 902 1.06E-78 T 15-10-2018 IPR036266 SecA, Wing/Scaffold superfamily D934_13130 322f3bb7df031d803d2a3d608c554301 914 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 815 0.0 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D934_13130 322f3bb7df031d803d2a3d608c554301 914 SUPERFAMILY SSF52540 412 615 5.11E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_13130 322f3bb7df031d803d2a3d608c554301 914 SUPERFAMILY SSF52540 6 411 1.84E-84 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_13130 322f3bb7df031d803d2a3d608c554301 914 Pfam PF07517 SecA DEAD-like domain 7 398 3.0E-132 T 15-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 D934_13130 322f3bb7df031d803d2a3d608c554301 914 SMART SM00958 228 354 2.2E-78 T 15-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 D934_13130 322f3bb7df031d803d2a3d608c554301 914 Gene3D G3DSA:3.40.50.300 22 411 1.1E-177 T 15-10-2018 D934_13130 322f3bb7df031d803d2a3d608c554301 914 Pfam PF01043 SecA preprotein cross-linking domain 233 354 2.7E-38 T 15-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 D934_13130 322f3bb7df031d803d2a3d608c554301 914 Gene3D G3DSA:1.10.3060.10 619 830 2.8E-71 T 15-10-2018 D934_13130 322f3bb7df031d803d2a3d608c554301 914 Pfam PF07516 SecA Wing and Scaffold domain 615 826 1.3E-64 T 15-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 D934_13130 322f3bb7df031d803d2a3d608c554301 914 PRINTS PR00906 SecA protein signature 63 87 5.2E-72 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D934_13130 322f3bb7df031d803d2a3d608c554301 914 PRINTS PR00906 SecA protein signature 117 127 5.2E-72 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D934_13130 322f3bb7df031d803d2a3d608c554301 914 PRINTS PR00906 SecA protein signature 335 357 5.2E-72 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D934_13130 322f3bb7df031d803d2a3d608c554301 914 PRINTS PR00906 SecA protein signature 372 389 5.2E-72 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D934_13130 322f3bb7df031d803d2a3d608c554301 914 PRINTS PR00906 SecA protein signature 409 422 5.2E-72 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D934_13130 322f3bb7df031d803d2a3d608c554301 914 PRINTS PR00906 SecA protein signature 170 190 5.2E-72 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D934_13130 322f3bb7df031d803d2a3d608c554301 914 PRINTS PR00906 SecA protein signature 101 115 5.2E-72 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D934_13130 322f3bb7df031d803d2a3d608c554301 914 SMART SM00957 6 398 0.0 T 15-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 D934_13130 322f3bb7df031d803d2a3d608c554301 914 Gene3D G3DSA:3.40.50.300 413 617 1.8E-84 T 15-10-2018 D934_13130 322f3bb7df031d803d2a3d608c554301 914 Pfam PF02810 SEC-C motif 894 911 8.4E-11 T 15-10-2018 IPR004027 SEC-C motif D934_04165 b92ee39b78eb25120f58ee2cddf64ab5 199 Gene3D G3DSA:2.30.110.10 3 199 1.1E-66 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 D934_04165 b92ee39b78eb25120f58ee2cddf64ab5 199 SUPERFAMILY SSF50475 4 199 1.92E-54 T 15-10-2018 D934_04165 b92ee39b78eb25120f58ee2cddf64ab5 199 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 158 199 5.2E-12 T 15-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D934_04165 b92ee39b78eb25120f58ee2cddf64ab5 199 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 5 196 2.4E-59 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D934_04165 b92ee39b78eb25120f58ee2cddf64ab5 199 PIRSF PIRSF000190 3 199 5.0E-62 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D934_04165 b92ee39b78eb25120f58ee2cddf64ab5 199 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 168 181 - T 15-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D934_04165 b92ee39b78eb25120f58ee2cddf64ab5 199 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 4 199 33.77 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D934_04165 b92ee39b78eb25120f58ee2cddf64ab5 199 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 26 104 2.2E-24 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D934_13595 5188264a7dc158f4e1a2006bea98baeb 112 Gene3D G3DSA:2.60.300.12 2 107 5.0E-31 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D934_13595 5188264a7dc158f4e1a2006bea98baeb 112 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 4.6E-15 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 D934_13595 5188264a7dc158f4e1a2006bea98baeb 112 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 5.1E-30 T 15-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 D934_13595 5188264a7dc158f4e1a2006bea98baeb 112 SUPERFAMILY SSF89360 1 95 9.61E-26 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D934_13595 5188264a7dc158f4e1a2006bea98baeb 112 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 15-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 D934_04770 0a376ff73ded304fc12c0a0af4dc37f8 262 SUPERFAMILY SSF54423 50 100 1.35E-10 T 15-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 D934_04770 0a376ff73ded304fc12c0a0af4dc37f8 262 Pfam PF10411 Disulfide bond isomerase protein N-terminus 47 99 7.2E-16 T 15-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal D934_04770 0a376ff73ded304fc12c0a0af4dc37f8 262 Gene3D G3DSA:3.40.30.10 98 255 4.1E-46 T 15-10-2018 D934_04770 0a376ff73ded304fc12c0a0af4dc37f8 262 Gene3D G3DSA:3.10.450.70 40 97 2.0E-10 T 15-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 D934_04770 0a376ff73ded304fc12c0a0af4dc37f8 262 Pfam PF13098 Thioredoxin-like domain 129 251 1.9E-24 T 15-10-2018 IPR012336 Thioredoxin-like fold D934_04770 0a376ff73ded304fc12c0a0af4dc37f8 262 SUPERFAMILY SSF52833 112 253 7.04E-35 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_01215 293a4a9a5d472c4bb47935bbe06c14de 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 41.609 T 15-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 D934_01215 293a4a9a5d472c4bb47935bbe06c14de 271 SUPERFAMILY SSF46946 132 223 1.62E-28 T 15-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 D934_01215 293a4a9a5d472c4bb47935bbe06c14de 271 Gene3D G3DSA:1.10.8.50 141 270 4.9E-43 T 15-10-2018 D934_01215 293a4a9a5d472c4bb47935bbe06c14de 271 SUPERFAMILY SSF81624 2 136 3.66E-38 T 15-10-2018 IPR035937 MutM-like, N-terminal D934_01215 293a4a9a5d472c4bb47935bbe06c14de 271 SMART SM00898 2 117 6.1E-49 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 D934_01215 293a4a9a5d472c4bb47935bbe06c14de 271 Gene3D G3DSA:3.20.190.10 2 130 3.1E-36 T 15-10-2018 IPR035937 MutM-like, N-terminal D934_01215 293a4a9a5d472c4bb47935bbe06c14de 271 SUPERFAMILY SSF57716 219 270 4.56E-15 T 15-10-2018 D934_01215 293a4a9a5d472c4bb47935bbe06c14de 271 SMART SM01232 131 223 2.7E-43 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 D934_01215 293a4a9a5d472c4bb47935bbe06c14de 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 1.1E-87 T 15-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 D934_01215 293a4a9a5d472c4bb47935bbe06c14de 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 1.0E-30 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 D934_01215 293a4a9a5d472c4bb47935bbe06c14de 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 3.9E-23 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 D934_01215 293a4a9a5d472c4bb47935bbe06c14de 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 15-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 D934_01680 293a4a9a5d472c4bb47935bbe06c14de 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 41.609 T 15-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 D934_01680 293a4a9a5d472c4bb47935bbe06c14de 271 SUPERFAMILY SSF46946 132 223 1.62E-28 T 15-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 D934_01680 293a4a9a5d472c4bb47935bbe06c14de 271 Gene3D G3DSA:1.10.8.50 141 270 4.9E-43 T 15-10-2018 D934_01680 293a4a9a5d472c4bb47935bbe06c14de 271 SUPERFAMILY SSF81624 2 136 3.66E-38 T 15-10-2018 IPR035937 MutM-like, N-terminal D934_01680 293a4a9a5d472c4bb47935bbe06c14de 271 SMART SM00898 2 117 6.1E-49 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 D934_01680 293a4a9a5d472c4bb47935bbe06c14de 271 Gene3D G3DSA:3.20.190.10 2 130 3.1E-36 T 15-10-2018 IPR035937 MutM-like, N-terminal D934_01680 293a4a9a5d472c4bb47935bbe06c14de 271 SUPERFAMILY SSF57716 219 270 4.56E-15 T 15-10-2018 D934_01680 293a4a9a5d472c4bb47935bbe06c14de 271 SMART SM01232 131 223 2.7E-43 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 D934_01680 293a4a9a5d472c4bb47935bbe06c14de 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 1.1E-87 T 15-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 D934_01680 293a4a9a5d472c4bb47935bbe06c14de 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 1.0E-30 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 D934_01680 293a4a9a5d472c4bb47935bbe06c14de 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 3.9E-23 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 D934_01680 293a4a9a5d472c4bb47935bbe06c14de 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 15-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 D934_04965 59863bbddaa73e4351031720e2cace52 304 SUPERFAMILY SSF52096 34 292 2.89E-83 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D934_04965 59863bbddaa73e4351031720e2cace52 304 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 7 291 1.1E-125 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_04965 59863bbddaa73e4351031720e2cace52 304 Gene3D G3DSA:3.90.226.10 34 294 1.4E-82 T 15-10-2018 D934_04965 59863bbddaa73e4351031720e2cace52 304 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 7 290 37.707 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_04965 59863bbddaa73e4351031720e2cace52 304 Pfam PF01039 Carboxyl transferase domain 132 249 5.3E-15 T 15-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 D934_04965 59863bbddaa73e4351031720e2cace52 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 238 249 4.1E-41 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_04965 59863bbddaa73e4351031720e2cace52 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 260 269 4.1E-41 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_04965 59863bbddaa73e4351031720e2cace52 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 172 190 4.1E-41 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_04965 59863bbddaa73e4351031720e2cace52 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 138 152 4.1E-41 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_04965 59863bbddaa73e4351031720e2cace52 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 209 226 4.1E-41 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_03895 5485cd097cc367cb49078ede3fe532f2 439 Pfam PF00571 CBS domain 215 269 0.0015 T 15-10-2018 IPR000644 CBS domain D934_03895 5485cd097cc367cb49078ede3fe532f2 439 Pfam PF00571 CBS domain 285 332 6.8E-8 T 15-10-2018 IPR000644 CBS domain D934_03895 5485cd097cc367cb49078ede3fe532f2 439 Gene3D G3DSA:3.30.465.10 342 430 4.1E-36 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D934_03895 5485cd097cc367cb49078ede3fe532f2 439 Pfam PF03471 Transporter associated domain 351 429 7.1E-22 T 15-10-2018 IPR005170 Transporter-associated domain D934_03895 5485cd097cc367cb49078ede3fe532f2 439 SMART SM01091 349 430 1.1E-32 T 15-10-2018 IPR005170 Transporter-associated domain D934_03895 5485cd097cc367cb49078ede3fe532f2 439 Gene3D G3DSA:3.10.580.10 191 341 1.1E-39 T 15-10-2018 D934_03895 5485cd097cc367cb49078ede3fe532f2 439 SMART SM00116 285 333 0.0052 T 15-10-2018 IPR000644 CBS domain D934_03895 5485cd097cc367cb49078ede3fe532f2 439 SMART SM00116 221 270 0.62 T 15-10-2018 IPR000644 CBS domain D934_03895 5485cd097cc367cb49078ede3fe532f2 439 SUPERFAMILY SSF56176 344 429 2.73E-24 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D934_03895 5485cd097cc367cb49078ede3fe532f2 439 SUPERFAMILY SSF54631 199 334 3.9E-27 T 15-10-2018 D934_03895 5485cd097cc367cb49078ede3fe532f2 439 Pfam PF01595 Domain of unknown function DUF21 5 197 1.3E-46 T 15-10-2018 IPR002550 CNNM, transmembrane domain D934_07490 9f0bd1355d9caa9e3d5037bef91ddfe9 154 Pfam PF13899 Thioredoxin-like 30 114 5.2E-15 T 15-10-2018 D934_07490 9f0bd1355d9caa9e3d5037bef91ddfe9 154 SUPERFAMILY SSF52833 1 126 1.14E-16 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_07490 9f0bd1355d9caa9e3d5037bef91ddfe9 154 Gene3D G3DSA:3.40.30.10 16 148 1.9E-38 T 15-10-2018 D934_05100 c0d05e80821e37e758f1f516d4a80837 189 Pfam PF09684 Phage tail protein (Tail_P2_I) 13 154 1.7E-45 T 15-10-2018 IPR006521 Tail protein I D934_05100 c0d05e80821e37e758f1f516d4a80837 189 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 13 151 1.0E-68 T 15-10-2018 IPR006521 Tail protein I D934_02935 c0d05e80821e37e758f1f516d4a80837 189 Pfam PF09684 Phage tail protein (Tail_P2_I) 13 154 1.7E-45 T 15-10-2018 IPR006521 Tail protein I D934_02935 c0d05e80821e37e758f1f516d4a80837 189 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 13 151 1.0E-68 T 15-10-2018 IPR006521 Tail protein I D934_06395 c0d05e80821e37e758f1f516d4a80837 189 Pfam PF09684 Phage tail protein (Tail_P2_I) 13 154 1.7E-45 T 15-10-2018 IPR006521 Tail protein I D934_06395 c0d05e80821e37e758f1f516d4a80837 189 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 13 151 1.0E-68 T 15-10-2018 IPR006521 Tail protein I D934_08255 2fcae53c69fff56f1c8b14f6a3b07036 269 SUPERFAMILY SSF48452 62 221 3.67E-20 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_08255 2fcae53c69fff56f1c8b14f6a3b07036 269 Gene3D G3DSA:1.25.40.10 53 266 2.4E-39 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_08255 2fcae53c69fff56f1c8b14f6a3b07036 269 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 15 260 3.9E-49 T 15-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW D934_08255 2fcae53c69fff56f1c8b14f6a3b07036 269 SMART SM00028 90 123 2.7 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_08255 2fcae53c69fff56f1c8b14f6a3b07036 269 SMART SM00028 160 193 3.1 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_08255 2fcae53c69fff56f1c8b14f6a3b07036 269 Pfam PF13181 Tetratricopeptide repeat 91 122 0.015 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_13205 ff90803cb2d041db1e2b10ef0fde7abd 87 Pfam PF04999 Cell division protein FtsL 5 87 1.3E-25 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 D934_13205 ff90803cb2d041db1e2b10ef0fde7abd 87 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 4 85 1.0E-23 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 D934_13205 ff90803cb2d041db1e2b10ef0fde7abd 87 Hamap MF_00910 Cell division protein FtsL [ftsL]. 2 85 16.566 T 15-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 D934_01470 d5eb5a1d94fc1dace11325a732314778 606 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 39 2.3E-6 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal D934_01470 d5eb5a1d94fc1dace11325a732314778 606 SUPERFAMILY SSF49503 453 604 5.24E-38 T 15-10-2018 IPR008972 Cupredoxin D934_01470 d5eb5a1d94fc1dace11325a732314778 606 Gene3D G3DSA:2.60.40.420 175 384 6.0E-38 T 15-10-2018 IPR008972 Cupredoxin D934_01470 d5eb5a1d94fc1dace11325a732314778 606 SUPERFAMILY SSF49503 45 201 2.99E-42 T 15-10-2018 IPR008972 Cupredoxin D934_01470 d5eb5a1d94fc1dace11325a732314778 606 Gene3D G3DSA:2.60.40.420 485 605 1.4E-31 T 15-10-2018 IPR008972 Cupredoxin D934_01470 d5eb5a1d94fc1dace11325a732314778 606 Pfam PF00394 Multicopper oxidase 213 357 5.9E-31 T 15-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 D934_01470 d5eb5a1d94fc1dace11325a732314778 606 Pfam PF07731 Multicopper oxidase 492 605 1.3E-26 T 15-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 D934_01470 d5eb5a1d94fc1dace11325a732314778 606 Gene3D G3DSA:2.60.40.420 35 169 4.2E-41 T 15-10-2018 IPR008972 Cupredoxin D934_01470 d5eb5a1d94fc1dace11325a732314778 606 ProSitePatterns PS00080 Multicopper oxidases signature 2. 587 598 - T 15-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 D934_01470 d5eb5a1d94fc1dace11325a732314778 606 Pfam PF07732 Multicopper oxidase 59 169 6.0E-40 T 15-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 D934_01470 d5eb5a1d94fc1dace11325a732314778 606 SUPERFAMILY SSF49503 174 384 2.56E-53 T 15-10-2018 IPR008972 Cupredoxin D934_01470 d5eb5a1d94fc1dace11325a732314778 606 ProSitePatterns PS00079 Multicopper oxidases signature 1. 582 602 - T 15-10-2018 IPR033138 Multicopper oxidases, conserved site D934_01470 d5eb5a1d94fc1dace11325a732314778 606 ProSitePatterns PS00079 Multicopper oxidases signature 1. 145 165 - T 15-10-2018 IPR033138 Multicopper oxidases, conserved site D934_01470 d5eb5a1d94fc1dace11325a732314778 606 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 8 605 0.0 T 15-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 D934_05800 e7f6ee846641fc3b173f1c2cf784e939 496 PIRSF PIRSF006060 25 495 1.9E-94 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D934_05800 e7f6ee846641fc3b173f1c2cf784e939 496 Gene3D G3DSA:1.20.1740.10 39 494 4.6E-124 T 15-10-2018 D934_05800 e7f6ee846641fc3b173f1c2cf784e939 496 Pfam PF13520 Amino acid permease 48 464 4.1E-58 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D934_12535 52e6b693512ad2d2c92d94c18bd77336 424 Pfam PF03583 Secretory lipase 134 212 2.4E-6 T 15-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 D934_12535 52e6b693512ad2d2c92d94c18bd77336 424 SUPERFAMILY SSF53474 89 384 1.79E-19 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_12535 52e6b693512ad2d2c92d94c18bd77336 424 Gene3D G3DSA:3.40.50.1820 35 259 6.2E-52 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_12535 52e6b693512ad2d2c92d94c18bd77336 424 Gene3D G3DSA:3.40.50.1820 341 424 1.3E-18 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_12535 52e6b693512ad2d2c92d94c18bd77336 424 PIRSF PIRSF029171 6 424 6.6E-72 T 15-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 D934_11350 abfe04e0fcc5b11781a9c02a46bd6c7e 398 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 15 396 34.591 T 15-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 D934_11350 abfe04e0fcc5b11781a9c02a46bd6c7e 398 SUPERFAMILY SSF48452 50 261 1.52E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_11350 abfe04e0fcc5b11781a9c02a46bd6c7e 398 Gene3D G3DSA:1.25.40.10 44 182 4.3E-18 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_11350 abfe04e0fcc5b11781a9c02a46bd6c7e 398 Gene3D G3DSA:1.25.40.10 188 323 1.0E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_07565 13318ab934f79b38eefadb70bf5023a0 349 SMART SM00388 120 187 9.1E-12 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_07565 13318ab934f79b38eefadb70bf5023a0 349 SMART SM00387 226 339 4.3E-24 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_07565 13318ab934f79b38eefadb70bf5023a0 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 226 336 8.3E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_07565 13318ab934f79b38eefadb70bf5023a0 349 Gene3D G3DSA:1.10.287.130 125 183 4.6E-11 T 15-10-2018 D934_07565 13318ab934f79b38eefadb70bf5023a0 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 121 179 4.4E-12 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_07565 13318ab934f79b38eefadb70bf5023a0 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 336 9.7E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_07565 13318ab934f79b38eefadb70bf5023a0 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 271 285 9.7E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_07565 13318ab934f79b38eefadb70bf5023a0 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 9.7E-8 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_07565 13318ab934f79b38eefadb70bf5023a0 349 SUPERFAMILY SSF55874 190 336 7.86E-29 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_07565 13318ab934f79b38eefadb70bf5023a0 349 SUPERFAMILY SSF47384 110 181 7.06E-11 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D934_07565 13318ab934f79b38eefadb70bf5023a0 349 Gene3D G3DSA:3.30.565.10 185 337 2.2E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_02600 a7ead8c84331b6cef4ef97731f1dc786 165 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 15 158 43.023 T 15-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 D934_02600 a7ead8c84331b6cef4ef97731f1dc786 165 SUPERFAMILY SSF53927 5 159 2.51E-53 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 D934_02600 a7ead8c84331b6cef4ef97731f1dc786 165 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 62 99 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 D934_02600 a7ead8c84331b6cef4ef97731f1dc786 165 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 110 1.7E-24 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain D934_02600 a7ead8c84331b6cef4ef97731f1dc786 165 Gene3D G3DSA:3.40.140.10 7 163 3.7E-54 T 15-10-2018 D934_00475 cc46cdc2856dff2bceeab34fa1b22c9c 564 SUPERFAMILY SSF50249 195 269 1.43E-25 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_00475 cc46cdc2856dff2bceeab34fa1b22c9c 564 SUPERFAMILY SSF68912 147 192 1.29E-7 T 15-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily D934_00475 cc46cdc2856dff2bceeab34fa1b22c9c 564 Pfam PF07498 Rho termination factor, N-terminal domain 150 193 5.0E-14 T 15-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 D934_00475 cc46cdc2856dff2bceeab34fa1b22c9c 564 SMART SM00959 150 193 1.3E-13 T 15-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 D934_00475 cc46cdc2856dff2bceeab34fa1b22c9c 564 Gene3D G3DSA:3.40.50.300 276 563 3.3E-128 T 15-10-2018 D934_00475 cc46cdc2856dff2bceeab34fa1b22c9c 564 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 306 509 1.8E-22 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D934_00475 cc46cdc2856dff2bceeab34fa1b22c9c 564 SMART SM00382 316 496 3.7E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_00475 cc46cdc2856dff2bceeab34fa1b22c9c 564 Gene3D G3DSA:2.40.50.140 194 269 2.3E-30 T 15-10-2018 D934_00475 cc46cdc2856dff2bceeab34fa1b22c9c 564 Pfam PF07497 Rho termination factor, RNA-binding domain 198 270 1.0E-27 T 15-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 D934_00475 cc46cdc2856dff2bceeab34fa1b22c9c 564 Gene3D G3DSA:1.10.720.10 147 193 1.8E-15 T 15-10-2018 D934_00475 cc46cdc2856dff2bceeab34fa1b22c9c 564 Hamap MF_01884 Transcription termination factor Rho [rho]. 146 564 228.94 T 15-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 D934_00475 cc46cdc2856dff2bceeab34fa1b22c9c 564 TIGRFAM TIGR00767 rho: transcription termination factor Rho 147 563 1.5E-206 T 15-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 D934_00475 cc46cdc2856dff2bceeab34fa1b22c9c 564 SMART SM00357 198 264 6.8E-15 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 D934_00475 cc46cdc2856dff2bceeab34fa1b22c9c 564 SUPERFAMILY SSF52540 236 517 1.21E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_12845 9e4aa9e38be7b8b25b7e211857eb3ef5 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 15-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 D934_12845 9e4aa9e38be7b8b25b7e211857eb3ef5 220 Pfam PF00484 Carbonic anhydrase 37 188 2.0E-49 T 15-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 D934_12845 9e4aa9e38be7b8b25b7e211857eb3ef5 220 SUPERFAMILY SSF53056 2 212 2.09E-76 T 15-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 D934_12845 9e4aa9e38be7b8b25b7e211857eb3ef5 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 15-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 D934_12845 9e4aa9e38be7b8b25b7e211857eb3ef5 220 Gene3D G3DSA:3.40.1050.10 1 209 3.3E-81 T 15-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 D934_12845 9e4aa9e38be7b8b25b7e211857eb3ef5 220 SMART SM00947 30 193 3.6E-67 T 15-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 D934_12985 2c1d1a1ea46a4b9d4749e905fe8e2f2d 891 Pfam PF00703 Glycosyl hydrolases family 2 236 345 1.2E-10 T 15-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 D934_12985 2c1d1a1ea46a4b9d4749e905fe8e2f2d 891 Gene3D G3DSA:2.60.40.10 235 343 5.6E-20 T 15-10-2018 IPR013783 Immunoglobulin-like fold D934_12985 2c1d1a1ea46a4b9d4749e905fe8e2f2d 891 Gene3D G3DSA:3.20.20.80 344 697 6.6E-120 T 15-10-2018 D934_12985 2c1d1a1ea46a4b9d4749e905fe8e2f2d 891 SUPERFAMILY SSF49303 801 877 1.37E-14 T 15-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily D934_12985 2c1d1a1ea46a4b9d4749e905fe8e2f2d 891 SUPERFAMILY SSF49303 237 344 7.91E-20 T 15-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily D934_12985 2c1d1a1ea46a4b9d4749e905fe8e2f2d 891 Gene3D G3DSA:2.60.120.260 35 234 2.6E-60 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily D934_12985 2c1d1a1ea46a4b9d4749e905fe8e2f2d 891 SUPERFAMILY SSF49785 37 233 9.52E-48 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily D934_12985 2c1d1a1ea46a4b9d4749e905fe8e2f2d 891 Gene3D G3DSA:2.60.40.10 796 882 1.7E-16 T 15-10-2018 IPR013783 Immunoglobulin-like fold D934_12985 2c1d1a1ea46a4b9d4749e905fe8e2f2d 891 SUPERFAMILY SSF51445 343 699 2.37E-104 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily D934_12985 2c1d1a1ea46a4b9d4749e905fe8e2f2d 891 SUPERFAMILY SSF49303 701 799 1.64E-11 T 15-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily D934_03605 c7dd131f0b01832b2975f10eeee56aa5 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 70 9.5E-10 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D934_03605 c7dd131f0b01832b2975f10eeee56aa5 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 124 193 1.0E-8 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal D934_03605 c7dd131f0b01832b2975f10eeee56aa5 205 Gene3D G3DSA:1.20.1050.10 80 192 7.7E-77 T 15-10-2018 D934_03605 c7dd131f0b01832b2975f10eeee56aa5 205 SUPERFAMILY SSF47616 82 203 5.83E-24 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D934_03605 c7dd131f0b01832b2975f10eeee56aa5 205 Gene3D G3DSA:3.40.30.10 2 201 7.7E-77 T 15-10-2018 D934_03605 c7dd131f0b01832b2975f10eeee56aa5 205 SUPERFAMILY SSF52833 1 76 1.05E-14 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_04215 3aa5cbf83cf2ea6cb595e228544e2a19 315 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 285 5.0E-35 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 D934_04215 3aa5cbf83cf2ea6cb595e228544e2a19 315 PIRSF PIRSF026649 1 296 9.1E-69 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 D934_11020 b11f32fac8e869cab27d9083e2c8cb6f 468 SUPERFAMILY SSF50249 37 97 3.08E-11 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_11020 b11f32fac8e869cab27d9083e2c8cb6f 468 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 297 463 1.3E-19 T 15-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 D934_11020 b11f32fac8e869cab27d9083e2c8cb6f 468 SUPERFAMILY SSF53335 99 466 1.05E-74 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_11020 b11f32fac8e869cab27d9083e2c8cb6f 468 Gene3D G3DSA:2.40.50.140 23 110 4.8E-24 T 15-10-2018 D934_11020 b11f32fac8e869cab27d9083e2c8cb6f 468 Gene3D G3DSA:3.40.1350.30 158 299 2.0E-96 T 15-10-2018 D934_11020 b11f32fac8e869cab27d9083e2c8cb6f 468 Gene3D G3DSA:3.40.50.150 112 462 2.0E-96 T 15-10-2018 D934_11020 b11f32fac8e869cab27d9083e2c8cb6f 468 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 398 428 - T 15-10-2018 IPR030390 RNA methyltransferase TrmA, active site D934_11020 b11f32fac8e869cab27d9083e2c8cb6f 468 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 38 468 62.987 T 15-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 D934_11020 b11f32fac8e869cab27d9083e2c8cb6f 468 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 450 460 - T 15-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site D934_11020 b11f32fac8e869cab27d9083e2c8cb6f 468 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 44 460 7.3E-91 T 15-10-2018 D934_03280 f477316f93bb92197a478f807915d41c 466 Gene3D G3DSA:1.10.1140.10 349 466 9.2E-60 T 15-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D934_03280 f477316f93bb92197a478f807915d41c 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D934_03280 f477316f93bb92197a478f807915d41c 466 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 6.6E-250 T 15-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 D934_03280 f477316f93bb92197a478f807915d41c 466 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.332 T 15-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 D934_03280 f477316f93bb92197a478f807915d41c 466 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 4.6E-18 T 15-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D934_03280 f477316f93bb92197a478f807915d41c 466 SUPERFAMILY SSF47917 349 464 1.18E-54 T 15-10-2018 D934_03280 f477316f93bb92197a478f807915d41c 466 SMART SM00382 140 409 2.0E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_03280 f477316f93bb92197a478f807915d41c 466 SUPERFAMILY SSF52540 75 352 1.81E-90 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_03280 f477316f93bb92197a478f807915d41c 466 Gene3D G3DSA:3.40.50.300 74 348 4.2E-110 T 15-10-2018 D934_03280 f477316f93bb92197a478f807915d41c 466 SUPERFAMILY SSF50615 1 72 2.04E-24 T 15-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D934_03280 f477316f93bb92197a478f807915d41c 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.3E-61 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D934_03280 f477316f93bb92197a478f807915d41c 466 Gene3D G3DSA:2.40.10.170 1 73 3.1E-28 T 15-10-2018 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 Gene3D G3DSA:2.40.37.10 8 353 7.6E-122 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 SMART SM01005 233 356 3.6E-56 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 Hamap MF_01201 Alanine racemase. 1 356 33.371 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 SUPERFAMILY SSF51419 8 234 1.7E-69 T 15-10-2018 IPR029066 PLP-binding barrel D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 SUPERFAMILY SSF50621 228 357 1.85E-41 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 TIGRFAM TIGR00492 alr: alanine racemase 3 356 2.6E-102 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 Pfam PF00842 Alanine racemase, C-terminal domain 233 355 7.0E-36 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 15-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 Gene3D G3DSA:3.20.20.10 10 216 7.6E-122 T 15-10-2018 IPR029066 PLP-binding barrel D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 4.6E-68 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 PRINTS PR00992 Alanine racemase signature 191 218 4.7E-57 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 PRINTS PR00992 Alanine racemase signature 120 132 4.7E-57 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 PRINTS PR00992 Alanine racemase signature 287 304 4.7E-57 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 PRINTS PR00992 Alanine racemase signature 25 41 4.7E-57 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 PRINTS PR00992 Alanine racemase signature 60 78 4.7E-57 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 PRINTS PR00992 Alanine racemase signature 249 264 4.7E-57 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 PRINTS PR00992 Alanine racemase signature 154 165 4.7E-57 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_12960 88ea14bda3edd1fdb6bbc47e51fc4890 362 PRINTS PR00992 Alanine racemase signature 266 281 4.7E-57 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_10835 dd75b7930e2a30c2c61413f1e6e1e958 92 Gene3D G3DSA:1.10.1220.10 10 51 1.3E-6 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 D934_10835 dd75b7930e2a30c2c61413f1e6e1e958 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 42 4.7E-11 T 15-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 D934_10835 dd75b7930e2a30c2c61413f1e6e1e958 92 SUPERFAMILY SSF47598 4 44 5.56E-12 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 D934_03540 52a1b4b39c597a7c3f5dace7d7dbf64b 830 Pfam PF02867 Ribonucleotide reductase, barrel domain 295 814 1.1E-143 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D934_03540 52a1b4b39c597a7c3f5dace7d7dbf64b 830 SUPERFAMILY SSF51998 294 819 8.24E-165 T 15-10-2018 D934_03540 52a1b4b39c597a7c3f5dace7d7dbf64b 830 Gene3D G3DSA:3.20.70.20 139 823 1.6E-194 T 15-10-2018 D934_03540 52a1b4b39c597a7c3f5dace7d7dbf64b 830 SUPERFAMILY SSF48168 72 293 1.7E-50 T 15-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D934_03540 52a1b4b39c597a7c3f5dace7d7dbf64b 830 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 687 709 - T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D934_03540 52a1b4b39c597a7c3f5dace7d7dbf64b 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 698 725 1.1E-39 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D934_03540 52a1b4b39c597a7c3f5dace7d7dbf64b 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 571 594 1.1E-39 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D934_03540 52a1b4b39c597a7c3f5dace7d7dbf64b 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 370 389 1.1E-39 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D934_03540 52a1b4b39c597a7c3f5dace7d7dbf64b 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 637 660 1.1E-39 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D934_03540 52a1b4b39c597a7c3f5dace7d7dbf64b 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 609 631 1.1E-39 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D934_03540 52a1b4b39c597a7c3f5dace7d7dbf64b 830 PRINTS PR01183 Ribonucleotide reductase large chain signature 513 524 1.1E-39 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D934_03540 52a1b4b39c597a7c3f5dace7d7dbf64b 830 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 212 817 2.0E-167 T 15-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D934_03540 52a1b4b39c597a7c3f5dace7d7dbf64b 830 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 208 289 9.9E-14 T 15-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D934_07570 1f001ed41801cbd14ce074352f002c97 62 Gene3D G3DSA:1.10.290.10 3 56 9.7E-6 T 15-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 D934_03565 2201d5dca36a165417c99729ed0c2a29 226 SUPERFAMILY SSF56784 10 221 4.21E-48 T 15-10-2018 IPR036412 HAD-like superfamily D934_03565 2201d5dca36a165417c99729ed0c2a29 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 7.2E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D934_03565 2201d5dca36a165417c99729ed0c2a29 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 7.2E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D934_03565 2201d5dca36a165417c99729ed0c2a29 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 7.2E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D934_03565 2201d5dca36a165417c99729ed0c2a29 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 7.2E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D934_03565 2201d5dca36a165417c99729ed0c2a29 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 191 4.5E-15 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D934_03565 2201d5dca36a165417c99729ed0c2a29 226 Gene3D G3DSA:1.10.150.240 26 91 1.1E-46 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D934_03565 2201d5dca36a165417c99729ed0c2a29 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 191 3.1E-26 T 15-10-2018 D934_03565 2201d5dca36a165417c99729ed0c2a29 226 Gene3D G3DSA:3.40.50.1000 13 195 1.1E-46 T 15-10-2018 IPR023214 HAD superfamily D934_08530 272fddee6dfcd52c6ff86f24791bc299 93 SUPERFAMILY SSF47413 19 89 7.11E-19 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_08530 272fddee6dfcd52c6ff86f24791bc299 93 Pfam PF13744 Helix-turn-helix domain 14 89 6.3E-24 T 15-10-2018 IPR039554 HigA2-like, helix-turn-helix domain D934_08530 272fddee6dfcd52c6ff86f24791bc299 93 Gene3D G3DSA:1.10.260.40 11 93 4.7E-25 T 15-10-2018 D934_06640 272fddee6dfcd52c6ff86f24791bc299 93 SUPERFAMILY SSF47413 19 89 7.11E-19 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_06640 272fddee6dfcd52c6ff86f24791bc299 93 Pfam PF13744 Helix-turn-helix domain 14 89 6.3E-24 T 15-10-2018 IPR039554 HigA2-like, helix-turn-helix domain D934_06640 272fddee6dfcd52c6ff86f24791bc299 93 Gene3D G3DSA:1.10.260.40 11 93 4.7E-25 T 15-10-2018 D934_09720 c00effe938be5318f925b498986e6c32 1762 SUPERFAMILY SSF55874 1302 1483 8.77E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_09720 c00effe938be5318f925b498986e6c32 1762 SUPERFAMILY SSF47226 49 170 1.96E-17 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 SUPERFAMILY SSF47226 733 848 4.06E-13 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 Gene3D G3DSA:3.30.565.10 1299 1485 4.6E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_09720 c00effe938be5318f925b498986e6c32 1762 SUPERFAMILY SSF47226 327 445 1.06E-6 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 Gene3D G3DSA:2.40.50.180 1509 1570 5.9E-29 T 15-10-2018 D934_09720 c00effe938be5318f925b498986e6c32 1762 SUPERFAMILY SSF50341 1485 1614 6.41E-24 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 D934_09720 c00effe938be5318f925b498986e6c32 1762 SUPERFAMILY SSF47226 574 678 3.66E-22 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 SMART SM00387 1345 1486 5.9E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_09720 c00effe938be5318f925b498986e6c32 1762 Pfam PF00072 Response regulator receiver domain 1640 1751 1.1E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 SMART SM01231 1162 1300 1.5E-10 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 D934_09720 c00effe938be5318f925b498986e6c32 1762 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1164 1299 7.0E-6 T 15-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 D934_09720 c00effe938be5318f925b498986e6c32 1762 Gene3D G3DSA:1.20.120.160 977 1103 9.4E-24 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 Gene3D G3DSA:1.20.120.160 733 872 6.2E-7 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 Gene3D G3DSA:1.20.120.160 572 702 3.5E-19 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1446 1464 1.4E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_09720 c00effe938be5318f925b498986e6c32 1762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1390 1404 1.4E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_09720 c00effe938be5318f925b498986e6c32 1762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1470 1483 1.4E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_09720 c00effe938be5318f925b498986e6c32 1762 SUPERFAMILY SSF52172 1637 1759 2.56E-34 T 15-10-2018 IPR011006 CheY-like superfamily D934_09720 c00effe938be5318f925b498986e6c32 1762 SMART SM00260 1478 1615 2.7E-21 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D934_09720 c00effe938be5318f925b498986e6c32 1762 Gene3D G3DSA:3.40.50.12740 1639 1762 8.4E-36 T 15-10-2018 D934_09720 c00effe938be5318f925b498986e6c32 1762 SMART SM00073 976 1073 1.2E-12 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 SMART SM00073 575 673 3.6E-5 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 Gene3D G3DSA:2.30.30.40 1486 1610 5.9E-29 T 15-10-2018 D934_09720 c00effe938be5318f925b498986e6c32 1762 Pfam PF01584 CheW-like domain 1490 1617 4.5E-19 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D934_09720 c00effe938be5318f925b498986e6c32 1762 Pfam PF01627 Hpt domain 49 148 3.7E-7 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 Pfam PF01627 Hpt domain 978 1078 6.5E-14 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 Pfam PF01627 Hpt domain 578 666 1.2E-14 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 Pfam PF01627 Hpt domain 736 825 3.2E-8 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 SMART SM00448 1638 1751 9.1E-31 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 SUPERFAMILY SSF47226 978 1097 1.31E-24 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 D934_09720 c00effe938be5318f925b498986e6c32 1762 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1349 1485 3.5E-15 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_04075 cca502a8035509199a7bf29833eef65f 238 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 11 238 26.277 T 15-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 D934_04075 cca502a8035509199a7bf29833eef65f 238 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 12 237 2.5E-86 T 15-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 D934_04075 cca502a8035509199a7bf29833eef65f 238 Gene3D G3DSA:3.30.750.120 8 122 2.5E-9 T 15-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily D934_04075 cca502a8035509199a7bf29833eef65f 238 SUPERFAMILY SSF63848 134 237 1.03E-29 T 15-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 D934_04075 cca502a8035509199a7bf29833eef65f 238 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 8 111 7.4E-26 T 15-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 D934_04075 cca502a8035509199a7bf29833eef65f 238 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 136 234 7.3E-31 T 15-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 D934_04075 cca502a8035509199a7bf29833eef65f 238 Gene3D G3DSA:2.160.20.70 130 238 3.9E-30 T 15-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 D934_05820 d3dc43f765b0b34807b3cd4198733d35 232 Gene3D G3DSA:3.40.50.1000 6 213 5.9E-70 T 15-10-2018 IPR023214 HAD superfamily D934_05820 d3dc43f765b0b34807b3cd4198733d35 232 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 6 212 1.4E-75 T 15-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 D934_05820 d3dc43f765b0b34807b3cd4198733d35 232 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 3 230 40.548 T 15-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 D934_05820 d3dc43f765b0b34807b3cd4198733d35 232 SUPERFAMILY SSF56784 1 230 2.39E-56 T 15-10-2018 IPR036412 HAD-like superfamily D934_05820 d3dc43f765b0b34807b3cd4198733d35 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 117 197 3.9E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D934_05820 d3dc43f765b0b34807b3cd4198733d35 232 Gene3D G3DSA:1.10.720.60 18 99 5.9E-70 T 15-10-2018 D934_12815 73cbf6504985ed1fe1dcb79b5c7b78b3 443 Pfam PF13692 Glycosyl transferases group 1 271 405 6.0E-25 T 15-10-2018 D934_12815 73cbf6504985ed1fe1dcb79b5c7b78b3 443 Gene3D G3DSA:3.40.50.2000 266 431 4.0E-18 T 15-10-2018 D934_12815 73cbf6504985ed1fe1dcb79b5c7b78b3 443 SUPERFAMILY SSF53756 88 440 1.47E-30 T 15-10-2018 D934_06305 e11fdd2204c38aaf124f6fac5a401015 164 SUPERFAMILY SSF53955 5 148 4.09E-48 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_06305 e11fdd2204c38aaf124f6fac5a401015 164 Gene3D G3DSA:1.10.530.40 1 146 2.1E-50 T 15-10-2018 D934_06305 e11fdd2204c38aaf124f6fac5a401015 164 Pfam PF00959 Phage lysozyme 30 137 8.8E-20 T 15-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 D934_01455 4c13b4924d61ec7d912aadb6c230e66a 674 Gene3D G3DSA:1.10.1370.10 139 604 3.6E-237 T 15-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 D934_01455 4c13b4924d61ec7d912aadb6c230e66a 674 SUPERFAMILY SSF55486 1 671 1.71E-178 T 15-10-2018 D934_01455 4c13b4924d61ec7d912aadb6c230e66a 674 Pfam PF01432 Peptidase family M3 224 671 4.5E-136 T 15-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 D934_01455 4c13b4924d61ec7d912aadb6c230e66a 674 Gene3D G3DSA:1.10.1370.40 13 669 3.6E-237 T 15-10-2018 D934_05905 d6c82c786ca038e191a2d5f1df31478d 188 Gene3D G3DSA:3.40.1740.10 5 188 1.0E-61 T 15-10-2018 D934_05905 d6c82c786ca038e191a2d5f1df31478d 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 6 188 35.822 T 15-10-2018 IPR003774 Protein of unknown function UPF0301 D934_05905 d6c82c786ca038e191a2d5f1df31478d 188 Pfam PF02622 Uncharacterized ACR, COG1678 17 175 2.5E-45 T 15-10-2018 IPR003774 Protein of unknown function UPF0301 D934_05905 d6c82c786ca038e191a2d5f1df31478d 188 SUPERFAMILY SSF143456 6 188 1.31E-61 T 15-10-2018 D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.6E-16 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.6E-16 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.6E-16 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.3E-48 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.3E-48 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.3E-48 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.3E-48 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-48 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.3E-48 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 SUPERFAMILY SSF51735 6 246 1.39E-82 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 185 7.9E-4 T 15-10-2018 D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 6.7E-65 T 15-10-2018 D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 245 1.2E-98 T 15-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D934_11605 6b119adfcd74e54e3fbef96f3b42a8bd 247 Gene3D G3DSA:3.40.50.720 1 247 3.2E-82 T 15-10-2018 D934_02385 c7eb64c66d61f85cc64fb3391b0e5aa2 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 1.0E-16 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D934_02385 c7eb64c66d61f85cc64fb3391b0e5aa2 231 SUPERFAMILY SSF52172 1 179 1.71E-36 T 15-10-2018 IPR011006 CheY-like superfamily D934_02385 c7eb64c66d61f85cc64fb3391b0e5aa2 231 Pfam PF00072 Response regulator receiver domain 4 111 1.8E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_02385 c7eb64c66d61f85cc64fb3391b0e5aa2 231 SMART SM00448 1 112 1.6E-31 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_02385 c7eb64c66d61f85cc64fb3391b0e5aa2 231 Gene3D G3DSA:1.10.10.10 123 228 3.1E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_02385 c7eb64c66d61f85cc64fb3391b0e5aa2 231 Gene3D G3DSA:3.40.50.2300 1 122 5.5E-34 T 15-10-2018 D934_02385 c7eb64c66d61f85cc64fb3391b0e5aa2 231 SMART SM00862 145 218 6.9E-18 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D934_02065 44ffeaf18c9e6e6cb86dd17b5783545d 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 173 4.1E-69 T 15-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 D934_02065 44ffeaf18c9e6e6cb86dd17b5783545d 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 176 1.0E-99 T 15-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 D934_02065 44ffeaf18c9e6e6cb86dd17b5783545d 185 Gene3D G3DSA:2.60.120.10 1 184 1.0E-67 T 15-10-2018 IPR014710 RmlC-like jelly roll fold D934_02065 44ffeaf18c9e6e6cb86dd17b5783545d 185 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 175 1.2E-85 T 15-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 D934_02065 44ffeaf18c9e6e6cb86dd17b5783545d 185 SUPERFAMILY SSF51182 2 175 4.89E-71 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily D934_04195 e49219ce9c0d9d9bbb8bc9c1ab7f39bd 367 SUPERFAMILY SSF53850 56 363 2.86E-84 T 15-10-2018 D934_04195 e49219ce9c0d9d9bbb8bc9c1ab7f39bd 367 Pfam PF13531 Bacterial extracellular solute-binding protein 65 316 3.4E-41 T 15-10-2018 D934_04195 e49219ce9c0d9d9bbb8bc9c1ab7f39bd 367 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 181 189 - T 15-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 D934_04195 e49219ce9c0d9d9bbb8bc9c1ab7f39bd 367 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 52 363 4.2E-142 T 15-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 D934_04195 e49219ce9c0d9d9bbb8bc9c1ab7f39bd 367 Gene3D G3DSA:3.40.190.10 62 332 2.0E-128 T 15-10-2018 D934_04195 e49219ce9c0d9d9bbb8bc9c1ab7f39bd 367 Gene3D G3DSA:3.40.190.10 150 362 2.0E-128 T 15-10-2018 D934_10445 3b544052138d23e2798c8b5cd8a42fee 378 SUPERFAMILY SSF53067 89 188 4.79E-9 T 15-10-2018 D934_10445 3b544052138d23e2798c8b5cd8a42fee 378 Gene3D G3DSA:3.30.1490.300 108 166 6.3E-7 T 15-10-2018 D934_10445 3b544052138d23e2798c8b5cd8a42fee 378 Pfam PF05137 Fimbrial assembly protein (PilN) 290 361 4.3E-12 T 15-10-2018 IPR007813 Fimbrial assembly PilN D934_03445 ebcf1317cd31db4ad4d64ec924055d31 86 Pfam PF04380 Membrane fusogenic activity 1 77 1.5E-20 T 15-10-2018 IPR007475 Membrane fusogenic activity D934_13780 ff8c12e312961d9ad6c1a96d0bd17aa1 216 Pfam PF05713 Bacterial mobilisation protein (MobC) 144 163 9.2E-5 T 15-10-2018 IPR008687 Bacterial mobilisation D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 635 1.4E-105 T 15-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 1.9E-86 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 1.9E-86 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 1.9E-86 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.9E-86 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.9E-86 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 1.9E-86 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 1.9E-86 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 1.9E-86 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 Pfam PF01578 Cytochrome C assembly protein 89 295 1.1E-47 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 356 373 2.4E-44 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.4E-44 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.4E-44 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 399 418 2.4E-44 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 628 641 2.4E-44 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 2.4E-44 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11485 75e8a4bd5ea66b34bf2e0b161883d0ab 646 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 637 8.1E-204 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_05420 e8372563402002d4f99635b0577a5397 157 SUPERFAMILY SSF48013 21 147 8.24E-38 T 15-10-2018 IPR035926 NusB-like superfamily D934_05420 e8372563402002d4f99635b0577a5397 157 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 20 151 21.283 T 15-10-2018 IPR011605 NusB antitermination factor GO:0006353 D934_05420 e8372563402002d4f99635b0577a5397 157 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 22 147 3.0E-40 T 15-10-2018 IPR011605 NusB antitermination factor GO:0006353 D934_05420 e8372563402002d4f99635b0577a5397 157 Pfam PF01029 NusB family 24 146 3.5E-31 T 15-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 D934_05420 e8372563402002d4f99635b0577a5397 157 Gene3D G3DSA:1.10.940.10 15 154 3.6E-43 T 15-10-2018 IPR035926 NusB-like superfamily D934_05625 9910d609ea7ebd1afc9b8432fb992715 327 SUPERFAMILY SSF52540 118 310 2.88E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_05625 9910d609ea7ebd1afc9b8432fb992715 327 Gene3D G3DSA:3.40.50.300 110 315 5.0E-69 T 15-10-2018 D934_05625 9910d609ea7ebd1afc9b8432fb992715 327 Pfam PF02562 PhoH-like protein 112 315 2.6E-91 T 15-10-2018 IPR003714 PhoH-like protein GO:0005524 D934_03475 ba628f4986af8d18e7a97c252127008e 430 SUPERFAMILY SSF52413 315 426 2.62E-24 T 15-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 D934_03475 ba628f4986af8d18e7a97c252127008e 430 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 13 186 5.9E-30 T 15-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D934_03475 ba628f4986af8d18e7a97c252127008e 430 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 208 296 3.4E-23 T 15-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D934_03475 ba628f4986af8d18e7a97c252127008e 430 PIRSF PIRSF000124 12 429 2.8E-49 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 D934_03475 ba628f4986af8d18e7a97c252127008e 430 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 323 421 1.6E-20 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D934_03475 ba628f4986af8d18e7a97c252127008e 430 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 13 417 3.9E-112 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 D934_03475 ba628f4986af8d18e7a97c252127008e 430 SUPERFAMILY SSF51735 13 196 2.78E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_03475 ba628f4986af8d18e7a97c252127008e 430 SUPERFAMILY SSF48179 206 297 1.38E-24 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D934_03475 ba628f4986af8d18e7a97c252127008e 430 PIRSF PIRSF500136 2 430 5.3E-151 T 15-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 D934_03475 ba628f4986af8d18e7a97c252127008e 430 Gene3D G3DSA:3.40.50.720 207 429 6.2E-54 T 15-10-2018 D934_03475 ba628f4986af8d18e7a97c252127008e 430 Gene3D G3DSA:3.40.50.720 3 203 5.5E-56 T 15-10-2018 D934_03475 ba628f4986af8d18e7a97c252127008e 430 SMART SM00984 323 423 3.3E-32 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D934_09715 700058822adc1241e488496a0a8d69b9 399 PIRSF PIRSF036592 8 397 2.8E-215 T 15-10-2018 IPR012071 Chemotaxis glutamate methyltransferase D934_09715 700058822adc1241e488496a0a8d69b9 399 Pfam PF01339 CheB methylesterase 225 363 4.1E-10 T 15-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 D934_09715 700058822adc1241e488496a0a8d69b9 399 Gene3D G3DSA:3.40.50.180 222 335 8.2E-10 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal D934_09715 700058822adc1241e488496a0a8d69b9 399 SUPERFAMILY SSF52738 220 375 4.18E-20 T 15-10-2018 IPR035909 Methylesterase CheB, C-terminal D934_06805 78b4b6a6519b94683192bceb8f26abac 450 SMART SM00984 325 429 3.3E-49 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D934_06805 78b4b6a6519b94683192bceb8f26abac 450 Gene3D G3DSA:1.20.5.100 203 233 1.2E-17 T 15-10-2018 D934_06805 78b4b6a6519b94683192bceb8f26abac 450 SUPERFAMILY SSF48179 204 298 1.7E-32 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D934_06805 78b4b6a6519b94683192bceb8f26abac 450 SUPERFAMILY SSF52413 319 440 2.35E-38 T 15-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 D934_06805 78b4b6a6519b94683192bceb8f26abac 450 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 7.6E-38 T 15-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D934_06805 78b4b6a6519b94683192bceb8f26abac 450 Gene3D G3DSA:3.40.50.720 1 202 6.7E-79 T 15-10-2018 D934_06805 78b4b6a6519b94683192bceb8f26abac 450 SUPERFAMILY SSF51735 1 195 7.43E-57 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_06805 78b4b6a6519b94683192bceb8f26abac 450 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 429 4.7E-31 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D934_06805 78b4b6a6519b94683192bceb8f26abac 450 PIRSF PIRSF500134 1 447 6.7E-186 T 15-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 D934_06805 78b4b6a6519b94683192bceb8f26abac 450 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 425 7.6E-137 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 D934_06805 78b4b6a6519b94683192bceb8f26abac 450 Gene3D G3DSA:3.40.50.720 235 450 2.0E-76 T 15-10-2018 D934_06805 78b4b6a6519b94683192bceb8f26abac 450 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 1.5E-68 T 15-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D934_06805 78b4b6a6519b94683192bceb8f26abac 450 PIRSF PIRSF000124 1 444 3.3E-150 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 D934_03435 571b73b7ca4777a1913e100b7b24ba54 332 Gene3D G3DSA:3.30.1360.10 17 227 1.0E-78 T 15-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_03435 571b73b7ca4777a1913e100b7b24ba54 332 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 325 2.0E-34 T 15-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_03435 571b73b7ca4777a1913e100b7b24ba54 332 SUPERFAMILY SSF56553 53 177 4.19E-41 T 15-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_03435 571b73b7ca4777a1913e100b7b24ba54 332 SUPERFAMILY SSF55257 10 233 1.29E-30 T 15-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_03435 571b73b7ca4777a1913e100b7b24ba54 332 Gene3D G3DSA:1.10.150.20 245 327 6.4E-34 T 15-10-2018 D934_03435 571b73b7ca4777a1913e100b7b24ba54 332 Gene3D G3DSA:2.170.120.12 53 176 1.0E-78 T 15-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_03435 571b73b7ca4777a1913e100b7b24ba54 332 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 314 1.9E-104 T 15-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_03435 571b73b7ca4777a1913e100b7b24ba54 332 SMART SM00662 23 233 1.2E-103 T 15-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_03435 571b73b7ca4777a1913e100b7b24ba54 332 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 33.462 T 15-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_03435 571b73b7ca4777a1913e100b7b24ba54 332 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 307 2.0E-23 T 15-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_03435 571b73b7ca4777a1913e100b7b24ba54 332 SUPERFAMILY SSF47789 250 323 1.18E-24 T 15-10-2018 D934_03435 571b73b7ca4777a1913e100b7b24ba54 332 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 3.0E-23 T 15-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_03435 571b73b7ca4777a1913e100b7b24ba54 332 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 154 5.0E-23 T 15-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 1.4E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.4E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 488 502 1.4E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 1.4E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 381 397 1.4E-37 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 674 55.927 T 15-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 Pfam PF13368 Topoisomerase C-terminal repeat 594 653 3.3E-13 T 15-10-2018 IPR025589 Topoisomerase C-terminal repeat D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 Pfam PF13368 Topoisomerase C-terminal repeat 715 757 1.2E-13 T 15-10-2018 IPR025589 Topoisomerase C-terminal repeat D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 Pfam PF13368 Topoisomerase C-terminal repeat 658 703 8.1E-11 T 15-10-2018 IPR025589 Topoisomerase C-terminal repeat D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 Pfam PF01131 DNA topoisomerase 133 562 5.6E-130 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 618 1.2E-226 T 15-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 Gene3D G3DSA:1.10.290.10 260 396 7.5E-170 T 15-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 Gene3D G3DSA:1.10.460.10 139 565 7.5E-170 T 15-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 Gene3D G3DSA:3.40.50.140 1 138 7.5E-50 T 15-10-2018 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 SUPERFAMILY SSF56712 3 576 4.45E-186 T 15-10-2018 IPR023405 DNA topoisomerase, type IA, core domain D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 Gene3D G3DSA:2.70.20.10 188 472 7.5E-170 T 15-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 SMART SM00437 252 525 6.1E-115 T 15-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 312 - T 15-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 Pfam PF01751 Toprim domain 5 117 5.2E-26 T 15-10-2018 IPR006171 TOPRIM domain D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 SMART SM00436 108 196 1.5E-46 T 15-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 D934_05545 f0985ae286e6396d2f8dc03f40d7e730 815 SMART SM00493 3 103 7.8E-32 T 15-10-2018 IPR006171 TOPRIM domain D934_05110 b9e39f823ee92fcf7ebbce77f1ff55df 112 Pfam PF04965 Gene 25-like lysozyme 16 90 3.9E-14 T 15-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD D934_05110 b9e39f823ee92fcf7ebbce77f1ff55df 112 SUPERFAMILY SSF160719 9 104 4.18E-26 T 15-10-2018 D934_05110 b9e39f823ee92fcf7ebbce77f1ff55df 112 Gene3D G3DSA:3.10.450.40 3 105 2.9E-20 T 15-10-2018 D934_02945 b9e39f823ee92fcf7ebbce77f1ff55df 112 Pfam PF04965 Gene 25-like lysozyme 16 90 3.9E-14 T 15-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD D934_02945 b9e39f823ee92fcf7ebbce77f1ff55df 112 SUPERFAMILY SSF160719 9 104 4.18E-26 T 15-10-2018 D934_02945 b9e39f823ee92fcf7ebbce77f1ff55df 112 Gene3D G3DSA:3.10.450.40 3 105 2.9E-20 T 15-10-2018 D934_01530 8c006678126d8252ae2b3345b22caae8 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 6.7E-263 T 15-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 D934_01530 8c006678126d8252ae2b3345b22caae8 609 Gene3D G3DSA:3.60.20.10 2 240 2.6E-76 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D934_01530 8c006678126d8252ae2b3345b22caae8 609 SUPERFAMILY SSF56235 2 232 1.29E-71 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D934_01530 8c006678126d8252ae2b3345b22caae8 609 Gene3D G3DSA:3.40.50.10490 447 594 3.5E-140 T 15-10-2018 D934_01530 8c006678126d8252ae2b3345b22caae8 609 SUPERFAMILY SSF53697 244 609 8.72E-112 T 15-10-2018 D934_01530 8c006678126d8252ae2b3345b22caae8 609 Pfam PF13522 Glutamine amidotransferase domain 63 191 9.1E-21 T 15-10-2018 D934_01530 8c006678126d8252ae2b3345b22caae8 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 38.961 T 15-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 D934_01530 8c006678126d8252ae2b3345b22caae8 609 Pfam PF01380 SIS domain 463 591 5.4E-26 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D934_01530 8c006678126d8252ae2b3345b22caae8 609 Pfam PF01380 SIS domain 295 417 2.2E-29 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D934_01530 8c006678126d8252ae2b3345b22caae8 609 Gene3D G3DSA:3.40.50.10490 248 608 3.5E-140 T 15-10-2018 D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 Gene3D G3DSA:1.10.150.20 439 506 5.2E-19 T 15-10-2018 D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 SUPERFAMILY SSF56091 11 323 2.06E-113 T 15-10-2018 D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 Gene3D G3DSA:1.10.287.610 10 78 1.7E-25 T 15-10-2018 D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 759 829 2.6E-10 T 15-10-2018 IPR001357 BRCT domain D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 SUPERFAMILY SSF52113 758 833 7.85E-15 T 15-10-2018 IPR036420 BRCT domain superfamily D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 Gene3D G3DSA:2.20.70.80 398 438 3.2E-14 T 15-10-2018 D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 SUPERFAMILY SSF47781 411 656 3.03E-48 T 15-10-2018 IPR010994 RuvA domain 2-like D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 Hamap MF_01588 DNA ligase [ligA]. 10 831 49.708 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 SUPERFAMILY SSF47781 668 740 2.83E-7 T 15-10-2018 IPR010994 RuvA domain 2-like D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 122 151 - T 15-10-2018 IPR018239 NAD-dependent DNA ligase, active site D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 Gene3D G3DSA:1.10.150.20 578 658 5.4E-20 T 15-10-2018 D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 14 325 1.2E-119 T 15-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 SUPERFAMILY SSF50249 325 405 2.4E-26 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 Gene3D G3DSA:3.40.50.10190 747 834 7.9E-23 T 15-10-2018 IPR036420 BRCT domain superfamily D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 Gene3D G3DSA:2.40.50.140 325 397 3.5E-32 T 15-10-2018 D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 415 441 1.3E-9 T 15-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 328 403 2.2E-33 T 15-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 19 530 3.7E-187 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 Pfam PF12826 Helix-hairpin-helix motif 582 645 1.7E-13 T 15-10-2018 D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 Gene3D G3DSA:3.30.470.90 79 324 1.8E-92 T 15-10-2018 D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 SMART SM00292 757 834 6.2E-11 T 15-10-2018 IPR001357 BRCT domain D934_13560 8fc4a561827f8b9bb5dc16624c3a771c 837 SMART SM00532 11 455 2.8E-247 T 15-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 D934_02675 c8dbb4a6790b1d5b93e756bbc38b4455 480 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 260 276 - T 15-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 D934_02675 c8dbb4a6790b1d5b93e756bbc38b4455 480 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 15-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 D934_02675 c8dbb4a6790b1d5b93e756bbc38b4455 480 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 13 479 7.4E-147 T 15-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 D934_02675 c8dbb4a6790b1d5b93e756bbc38b4455 480 SUPERFAMILY SSF51735 238 400 2.94E-79 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_02675 c8dbb4a6790b1d5b93e756bbc38b4455 480 Gene3D G3DSA:3.40.50.1480 15 480 2.7E-232 T 15-10-2018 D934_02675 c8dbb4a6790b1d5b93e756bbc38b4455 480 SMART SM00996 12 479 0.0 T 15-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 D934_02675 c8dbb4a6790b1d5b93e756bbc38b4455 480 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 472 48.364 T 15-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 D934_02675 c8dbb4a6790b1d5b93e756bbc38b4455 480 SMART SM00997 238 400 5.7E-109 T 15-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 D934_02675 c8dbb4a6790b1d5b93e756bbc38b4455 480 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 238 400 2.7E-80 T 15-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 D934_02675 c8dbb4a6790b1d5b93e756bbc38b4455 480 Gene3D G3DSA:3.40.50.720 241 401 2.7E-232 T 15-10-2018 D934_02675 c8dbb4a6790b1d5b93e756bbc38b4455 480 PIRSF PIRSF001109 1 480 4.6E-193 T 15-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 D934_02675 c8dbb4a6790b1d5b93e756bbc38b4455 480 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 472 1.8E-189 T 15-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 D934_02675 c8dbb4a6790b1d5b93e756bbc38b4455 480 SUPERFAMILY SSF52283 11 480 1.08E-113 T 15-10-2018 D934_13040 48fdf90f1739a624883ae7cb59d717d1 343 SUPERFAMILY SSF46785 8 128 2.52E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_13040 48fdf90f1739a624883ae7cb59d717d1 343 Pfam PF03466 LysR substrate binding domain 105 308 9.1E-35 T 15-10-2018 IPR005119 LysR, substrate-binding D934_13040 48fdf90f1739a624883ae7cb59d717d1 343 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 80 5.7E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D934_13040 48fdf90f1739a624883ae7cb59d717d1 343 Gene3D G3DSA:1.10.10.10 13 102 2.0E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_13040 48fdf90f1739a624883ae7cb59d717d1 343 SUPERFAMILY SSF53850 106 313 1.57E-34 T 15-10-2018 D934_13040 48fdf90f1739a624883ae7cb59d717d1 343 Gene3D G3DSA:3.40.190.10 108 317 2.8E-62 T 15-10-2018 D934_13040 48fdf90f1739a624883ae7cb59d717d1 343 Gene3D G3DSA:3.40.190.10 183 283 2.8E-62 T 15-10-2018 D934_13040 48fdf90f1739a624883ae7cb59d717d1 343 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 4.0E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D934_13040 48fdf90f1739a624883ae7cb59d717d1 343 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 4.0E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D934_13040 48fdf90f1739a624883ae7cb59d717d1 343 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 4.0E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D934_02305 298c0946dbf0ab5e348740b552372333 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 63 172 5.9E-23 T 15-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02305 298c0946dbf0ab5e348740b552372333 184 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 41.238 T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02305 298c0946dbf0ab5e348740b552372333 184 Gene3D G3DSA:3.40.50.12280 22 183 2.5E-78 T 15-10-2018 D934_02305 298c0946dbf0ab5e348740b552372333 184 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 38 177 3.2E-76 T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02305 298c0946dbf0ab5e348740b552372333 184 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02305 298c0946dbf0ab5e348740b552372333 184 SUPERFAMILY SSF56770 35 179 3.66E-66 T 15-10-2018 D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 SMART SM00382 183 328 8.8E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 SMART SM00382 464 631 8.5E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 1 38 1.0E-7 T 15-10-2018 IPR004176 Clp, N-terminal D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 Gene3D G3DSA:3.40.50.300 417 628 9.0E-75 T 15-10-2018 D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 630 708 2.7E-20 T 15-10-2018 IPR019489 Clp ATPase, C-terminal D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 286 1.7E-10 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 Gene3D G3DSA:1.10.1780.10 1 118 9.8E-32 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 SUPERFAMILY SSF52540 414 722 5.64E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 Gene3D G3DSA:3.40.50.300 133 327 3.7E-63 T 15-10-2018 D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 Gene3D G3DSA:1.10.8.60 329 415 1.9E-31 T 15-10-2018 D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 539 557 2.8E-35 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 510 528 2.8E-35 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 468 486 2.8E-35 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 572 586 2.8E-35 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 SMART SM01086 630 719 9.3E-29 T 15-10-2018 IPR019489 Clp ATPase, C-terminal D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 SUPERFAMILY SSF52540 145 407 2.48E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 Gene3D G3DSA:1.10.8.60 630 726 5.3E-26 T 15-10-2018 D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 SUPERFAMILY SSF81923 1 117 1.7E-46 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 Pfam PF07724 AAA domain (Cdc48 subfamily) 463 624 6.0E-45 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 279 291 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 D934_04855 24daef5f8a6d78db7dde771be13aefa8 734 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 1 711 0.0 T 15-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 D934_11545 a397ea7375a2eb7b7c69f425c2de6095 342 Pfam PF13394 4Fe-4S single cluster domain 122 199 4.7E-6 T 15-10-2018 D934_11545 a397ea7375a2eb7b7c69f425c2de6095 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 22 341 4.2E-134 T 15-10-2018 IPR022462 Lysine-2,3-aminomutase-like D934_11545 a397ea7375a2eb7b7c69f425c2de6095 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 22 335 3.9E-85 T 15-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase D934_11545 a397ea7375a2eb7b7c69f425c2de6095 342 PIRSF PIRSF004911 8 342 1.6E-101 T 15-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase D934_11545 a397ea7375a2eb7b7c69f425c2de6095 342 Gene3D G3DSA:3.20.20.70 57 341 6.7E-79 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_11545 a397ea7375a2eb7b7c69f425c2de6095 342 SUPERFAMILY SSF102114 112 331 3.79E-20 T 15-10-2018 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 609 623 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 3.2E-72 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 Pfam PF00873 AcrB/AcrD/AcrF family 4 1047 4.2E-301 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 SUPERFAMILY SSF82714 181 265 3.92E-17 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 SUPERFAMILY SSF82866 826 1050 1.96E-45 T 15-10-2018 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 SUPERFAMILY SSF82693 555 650 2.82E-12 T 15-10-2018 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 SUPERFAMILY SSF82714 706 776 6.93E-11 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 SUPERFAMILY SSF82693 136 322 6.98E-23 T 15-10-2018 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 SUPERFAMILY SSF82693 40 130 1.07E-20 T 15-10-2018 D934_11115 5ddf46bf6a62e0b30f26005d3e90c59e 1071 SUPERFAMILY SSF82866 288 489 1.57E-48 T 15-10-2018 D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 Gene3D G3DSA:2.40.30.10 793 891 3.8E-30 T 15-10-2018 D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 890 16.6 T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 SUPERFAMILY SSF46955 4 52 4.21E-9 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 Pfam PF00009 Elongation factor Tu GTP binding domain 396 551 1.8E-32 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 Pfam PF11987 Translation-initiation factor 2 678 782 3.8E-33 T 15-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 ProSitePatterns PS01176 Initiation factor 2 signature. 843 865 - T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 SUPERFAMILY SSF52156 676 799 3.79E-33 T 15-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 315 365 1.3E-13 T 15-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 69 105 1.8E-9 T 15-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 Gene3D G3DSA:3.40.50.300 389 561 2.8E-67 T 15-10-2018 D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 309 892 1.2E-240 T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 SUPERFAMILY SSF50447 794 890 5.2E-30 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 SUPERFAMILY SSF52540 383 556 1.23E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 Gene3D G3DSA:2.40.30.10 562 679 7.3E-39 T 15-10-2018 D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 Gene3D G3DSA:3.30.56.50 3 52 2.2E-10 T 15-10-2018 D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 394 549 6.3E-30 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 SUPERFAMILY SSF50447 564 647 1.85E-23 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D934_01970 a4a84c181d3067ab824f47e2d06e59bd 892 Gene3D G3DSA:3.40.50.10050 686 792 9.2E-33 T 15-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily D934_08975 3ac4b8b31d9337ed111d4dc7d2cea9af 351 SUPERFAMILY SSF57783 6 86 1.87E-30 T 15-10-2018 D934_08975 3ac4b8b31d9337ed111d4dc7d2cea9af 351 SMART SM00400 32 86 1.4E-27 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D934_08975 3ac4b8b31d9337ed111d4dc7d2cea9af 351 Gene3D G3DSA:3.90.580.10 2 95 2.7E-32 T 15-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 D934_08975 3ac4b8b31d9337ed111d4dc7d2cea9af 351 Pfam PF01807 CHC2 zinc finger 6 87 3.9E-32 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D934_07755 3ac4b8b31d9337ed111d4dc7d2cea9af 351 SUPERFAMILY SSF57783 6 86 1.87E-30 T 15-10-2018 D934_07755 3ac4b8b31d9337ed111d4dc7d2cea9af 351 SMART SM00400 32 86 1.4E-27 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D934_07755 3ac4b8b31d9337ed111d4dc7d2cea9af 351 Gene3D G3DSA:3.90.580.10 2 95 2.7E-32 T 15-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 D934_07755 3ac4b8b31d9337ed111d4dc7d2cea9af 351 Pfam PF01807 CHC2 zinc finger 6 87 3.9E-32 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D934_04640 ec97dd1c607ea4658bfd8c2743bbc9b9 301 Gene3D G3DSA:3.40.50.150 53 298 1.4E-28 T 15-10-2018 D934_04640 ec97dd1c607ea4658bfd8c2743bbc9b9 301 Pfam PF13649 Methyltransferase domain 80 174 3.3E-13 T 15-10-2018 D934_04640 ec97dd1c607ea4658bfd8c2743bbc9b9 301 SUPERFAMILY SSF53335 58 294 4.41E-32 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_00210 dc34bdb516687c4849c335f0bf749cee 169 SUPERFAMILY SSF46906 95 168 1.31E-24 T 15-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily D934_00210 dc34bdb516687c4849c335f0bf749cee 169 Pfam PF00298 Ribosomal protein L11, RNA binding domain 99 167 4.1E-22 T 15-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 D934_00210 dc34bdb516687c4849c335f0bf749cee 169 SUPERFAMILY SSF54747 30 99 1.1E-28 T 15-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily D934_00210 dc34bdb516687c4849c335f0bf749cee 169 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 32 169 30.815 T 15-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 D934_00210 dc34bdb516687c4849c335f0bf749cee 169 Gene3D G3DSA:3.30.1550.10 29 99 5.0E-34 T 15-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily D934_00210 dc34bdb516687c4849c335f0bf749cee 169 Pfam PF03946 Ribosomal protein L11, N-terminal domain 36 94 3.6E-28 T 15-10-2018 IPR020784 Ribosomal protein L11, N-terminal D934_00210 dc34bdb516687c4849c335f0bf749cee 169 SMART SM00649 36 168 1.3E-80 T 15-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 D934_00210 dc34bdb516687c4849c335f0bf749cee 169 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 30 168 7.9E-64 T 15-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_00210 dc34bdb516687c4849c335f0bf749cee 169 ProSitePatterns PS00359 Ribosomal protein L11 signature. 154 169 - T 15-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_00210 dc34bdb516687c4849c335f0bf749cee 169 Gene3D G3DSA:1.10.10.250 100 168 5.0E-25 T 15-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily D934_00210 dc34bdb516687c4849c335f0bf749cee 169 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 63 101 2.0E-16 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 362 435 2.1E-19 T 15-10-2018 IPR003029 S1 domain GO:0003676 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 18 87 1.7E-5 T 15-10-2018 IPR003029 S1 domain GO:0003676 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 189 261 2.5E-22 T 15-10-2018 IPR003029 S1 domain GO:0003676 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 280 348 2.9E-22 T 15-10-2018 IPR003029 S1 domain GO:0003676 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 449 521 1.5E-14 T 15-10-2018 IPR003029 S1 domain GO:0003676 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Pfam PF00575 S1 RNA binding domain 104 172 3.0E-10 T 15-10-2018 IPR003029 S1 domain GO:0003676 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 191 261 5.4E-28 T 15-10-2018 IPR022967 RNA-binding domain, S1 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 450 521 1.6E-16 T 15-10-2018 IPR022967 RNA-binding domain, S1 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 20 88 8.3E-6 T 15-10-2018 IPR022967 RNA-binding domain, S1 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 363 435 1.4E-20 T 15-10-2018 IPR022967 RNA-binding domain, S1 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 276 348 6.4E-25 T 15-10-2018 IPR022967 RNA-binding domain, S1 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SMART SM00316 104 172 7.7E-9 T 15-10-2018 IPR022967 RNA-binding domain, S1 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 104 186 4.39E-14 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 521 6.4E-208 T 15-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 188 269 8.5E-28 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 270 358 6.3E-29 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 99 184 1.3E-7 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 359 445 1.4E-23 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 1 113 1.57E-20 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 85 104 6.2E-85 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 156 176 6.2E-85 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 109 125 6.2E-85 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 213 234 6.2E-85 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 40 54 6.2E-85 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 331 349 6.2E-85 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 291 310 6.2E-85 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 22 40 6.2E-85 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PRINTS PR00681 Ribosomal protein S1 signature 127 144 6.2E-85 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 430 537 3.02E-21 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 256 357 3.06E-27 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 PIRSF PIRSF002111 1 535 3.2E-210 T 15-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 191 276 7.26E-27 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 446 527 2.1E-18 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 Gene3D G3DSA:2.40.50.140 7 98 3.4E-15 T 15-10-2018 D934_11365 4f4aa666ab46e606cbeeb1c09f2e5a01 558 SUPERFAMILY SSF50249 348 440 1.22E-21 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_03020 c2f73105c5a1b348d42fe13686e39b3a 213 Gene3D G3DSA:3.40.50.300 4 213 1.3E-40 T 15-10-2018 D934_03020 c2f73105c5a1b348d42fe13686e39b3a 213 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 160 7.2E-18 T 15-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain D934_03020 c2f73105c5a1b348d42fe13686e39b3a 213 SUPERFAMILY SSF52540 1 211 2.73E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_03020 c2f73105c5a1b348d42fe13686e39b3a 213 PIRSF PIRSF009320 1 210 3.4E-32 T 15-10-2018 D934_03275 9b2761f7193f69d5c74efc438fbad2e5 143 Gene3D G3DSA:2.60.15.10 2 141 1.0E-36 T 15-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03275 9b2761f7193f69d5c74efc438fbad2e5 143 SUPERFAMILY SSF51344 6 88 7.06E-23 T 15-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03275 9b2761f7193f69d5c74efc438fbad2e5 143 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 6 135 3.8E-42 T 15-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03275 9b2761f7193f69d5c74efc438fbad2e5 143 SUPERFAMILY SSF46604 91 138 5.75E-10 T 15-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03275 9b2761f7193f69d5c74efc438fbad2e5 143 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 12 92 6.0E-40 T 15-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03275 9b2761f7193f69d5c74efc438fbad2e5 143 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 5 133 19.446 T 15-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03275 9b2761f7193f69d5c74efc438fbad2e5 143 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 3.4E-8 T 15-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain D934_03275 9b2761f7193f69d5c74efc438fbad2e5 143 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 8 86 1.3E-27 T 15-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_08140 f2170e0045809d7da123233e9561c343 148 Pfam PF09424 Yqey-like protein 4 146 1.1E-55 T 15-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 D934_08140 f2170e0045809d7da123233e9561c343 148 Gene3D G3DSA:1.10.10.410 91 147 5.4E-19 T 15-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal D934_08140 f2170e0045809d7da123233e9561c343 148 Gene3D G3DSA:1.10.1510.10 1 90 1.0E-30 T 15-10-2018 D934_08140 f2170e0045809d7da123233e9561c343 148 SUPERFAMILY SSF89095 1 147 2.56E-43 T 15-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 D934_09140 16a6553dbe8746848b7c6f19293813ca 103 Gene3D G3DSA:2.40.50.140 1 83 8.9E-13 T 15-10-2018 D934_09140 16a6553dbe8746848b7c6f19293813ca 103 SUPERFAMILY SSF50249 1 82 2.91E-21 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_09140 16a6553dbe8746848b7c6f19293813ca 103 Pfam PF02303 Helix-destabilising protein 5 79 1.7E-10 T 15-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 D934_09140 16a6553dbe8746848b7c6f19293813ca 103 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 13 71 2.0E-30 T 15-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 D934_04065 1ab4b9dfc24776d0c12e0dfca29aa08b 85 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 81 1.3E-25 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 D934_04065 1ab4b9dfc24776d0c12e0dfca29aa08b 85 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 17.049 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 D934_04065 1ab4b9dfc24776d0c12e0dfca29aa08b 85 Gene3D G3DSA:3.30.1070.10 19 78 2.8E-24 T 15-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 D934_04065 1ab4b9dfc24776d0c12e0dfca29aa08b 85 Pfam PF03776 Septum formation topological specificity factor MinE 13 80 3.0E-21 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 D934_04065 1ab4b9dfc24776d0c12e0dfca29aa08b 85 SUPERFAMILY SSF55229 32 82 9.15E-13 T 15-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 D934_02075 0f8efe25d554a65c1ecd53e97b46c3d4 467 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 466 3.8E-230 T 15-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 D934_02075 0f8efe25d554a65c1ecd53e97b46c3d4 467 SUPERFAMILY SSF53448 5 280 5.63E-72 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_02075 0f8efe25d554a65c1ecd53e97b46c3d4 467 Gene3D G3DSA:2.60.120.10 346 451 5.6E-19 T 15-10-2018 IPR014710 RmlC-like jelly roll fold D934_02075 0f8efe25d554a65c1ecd53e97b46c3d4 467 Gene3D G3DSA:3.90.550.10 3 345 7.2E-118 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_02075 0f8efe25d554a65c1ecd53e97b46c3d4 467 Pfam PF01050 Mannose-6-phosphate isomerase 312 462 4.5E-74 T 15-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 D934_02075 0f8efe25d554a65c1ecd53e97b46c3d4 467 SUPERFAMILY SSF51182 183 466 1.36E-88 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily D934_02075 0f8efe25d554a65c1ecd53e97b46c3d4 467 Pfam PF00483 Nucleotidyl transferase 6 284 4.6E-73 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 D934_06115 7797f9e789d10fcb6ff7e589a4a6ae9c 102 SMART SM01259 21 94 7.1E-22 T 15-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 D934_06115 7797f9e789d10fcb6ff7e589a4a6ae9c 102 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 21 92 1.3E-20 T 15-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 D934_06115 7797f9e789d10fcb6ff7e589a4a6ae9c 102 PIRSF PIRSF028440 1 102 2.9E-40 T 15-10-2018 IPR014546 Uncharacterised conserved protein, lipid A biosynthesis D934_06115 7797f9e789d10fcb6ff7e589a4a6ae9c 102 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 16 99 3.0E-42 T 15-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 D934_08100 6f0992e9dd5472cdf5eb8d2fe2dfb39f 438 SUPERFAMILY SSF52374 7 335 1.02E-75 T 15-10-2018 D934_08100 6f0992e9dd5472cdf5eb8d2fe2dfb39f 438 SUPERFAMILY SSF160113 358 408 9.55E-9 T 15-10-2018 IPR036913 YegP-like superfamily D934_08100 6f0992e9dd5472cdf5eb8d2fe2dfb39f 438 Pfam PF00579 tRNA synthetases class I (W and Y) 7 283 8.9E-53 T 15-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_08100 6f0992e9dd5472cdf5eb8d2fe2dfb39f 438 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 6 336 35.344 T 15-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 D934_08100 6f0992e9dd5472cdf5eb8d2fe2dfb39f 438 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 6 335 8.8E-82 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D934_08100 6f0992e9dd5472cdf5eb8d2fe2dfb39f 438 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 19 35 5.7E-21 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D934_08100 6f0992e9dd5472cdf5eb8d2fe2dfb39f 438 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 153 174 5.7E-21 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D934_08100 6f0992e9dd5472cdf5eb8d2fe2dfb39f 438 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 71 90 5.7E-21 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D934_08100 6f0992e9dd5472cdf5eb8d2fe2dfb39f 438 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 205 215 5.7E-21 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D934_08100 6f0992e9dd5472cdf5eb8d2fe2dfb39f 438 Gene3D G3DSA:1.10.240.10 200 302 5.7E-107 T 15-10-2018 D934_08100 6f0992e9dd5472cdf5eb8d2fe2dfb39f 438 Gene3D G3DSA:3.40.50.620 8 335 5.7E-107 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_00480 99eb7b97d7770f6c99ff54c51af601e1 743 PIRSF PIRSF009407 1 742 0.0 T 15-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 D934_00480 99eb7b97d7770f6c99ff54c51af601e1 743 SUPERFAMILY SSF53659 4 739 0.0 T 15-10-2018 D934_00480 99eb7b97d7770f6c99ff54c51af601e1 743 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 3 739 0.0 T 15-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 D934_00480 99eb7b97d7770f6c99ff54c51af601e1 743 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 738 0.0 T 15-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 D934_00480 99eb7b97d7770f6c99ff54c51af601e1 743 Gene3D G3DSA:3.40.718.10 413 658 2.5E-6 T 15-10-2018 D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 SMART SM00271 4 62 7.4E-30 T 15-10-2018 IPR001623 DnaJ domain D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 Gene3D G3DSA:1.10.287.110 1 104 3.6E-32 T 15-10-2018 IPR036869 Chaperone J-domain superfamily D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 Gene3D G3DSA:2.10.230.10 133 192 1.8E-38 T 15-10-2018 D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 PRINTS PR00625 DnaJ domain signature 7 25 2.4E-28 T 15-10-2018 IPR001623 DnaJ domain D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 PRINTS PR00625 DnaJ domain signature 42 62 2.4E-28 T 15-10-2018 IPR001623 DnaJ domain D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 PRINTS PR00625 DnaJ domain signature 62 81 2.4E-28 T 15-10-2018 IPR001623 DnaJ domain D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 PRINTS PR00625 DnaJ domain signature 25 40 2.4E-28 T 15-10-2018 IPR001623 DnaJ domain D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 SUPERFAMILY SSF46565 1 98 3.01E-32 T 15-10-2018 IPR036869 Chaperone J-domain superfamily D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 Pfam PF00226 DnaJ domain 5 67 6.0E-26 T 15-10-2018 IPR001623 DnaJ domain D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 SUPERFAMILY SSF49493 244 329 2.49E-20 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 Gene3D G3DSA:2.60.260.20 239 347 7.9E-28 T 15-10-2018 D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 SUPERFAMILY SSF49493 100 242 2.49E-19 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 Gene3D G3DSA:2.60.260.20 105 234 1.8E-38 T 15-10-2018 D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 SUPERFAMILY SSF57938 120 195 1.44E-20 T 15-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 Pfam PF00684 DnaJ central domain 133 192 1.7E-13 T 15-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 358 38.797 T 15-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 Pfam PF01556 DnaJ C terminal domain 108 318 1.3E-41 T 15-10-2018 IPR002939 Chaperone DnaJ, C-terminal D934_10940 6b4b8cd2737461cf11d1938c61d3af43 364 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 333 7.2E-124 T 15-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 D934_12065 3c9f715c6e5d17fa4ff8ee7cdc255aef 341 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 81 325 1.1E-42 T 15-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 D934_12065 3c9f715c6e5d17fa4ff8ee7cdc255aef 341 Gene3D G3DSA:1.10.40.50 271 339 2.4E-18 T 15-10-2018 D934_12065 3c9f715c6e5d17fa4ff8ee7cdc255aef 341 Gene3D G3DSA:3.40.50.300 99 270 2.8E-43 T 15-10-2018 D934_12065 3c9f715c6e5d17fa4ff8ee7cdc255aef 341 SUPERFAMILY SSF52540 113 328 2.81E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_12065 3c9f715c6e5d17fa4ff8ee7cdc255aef 341 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 38 333 30.619 T 15-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 D934_12065 3c9f715c6e5d17fa4ff8ee7cdc255aef 341 Pfam PF03193 RsgA GTPase 96 270 1.0E-44 T 15-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 D934_10150 b598fe67c3af10d85decee9526e3b065 326 Gene3D G3DSA:3.40.50.300 129 324 6.3E-50 T 15-10-2018 D934_10150 b598fe67c3af10d85decee9526e3b065 326 SUPERFAMILY SSF52540 27 303 1.25E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_10150 b598fe67c3af10d85decee9526e3b065 326 Gene3D G3DSA:3.30.450.90 28 128 2.8E-11 T 15-10-2018 D934_10150 b598fe67c3af10d85decee9526e3b065 326 Pfam PF00437 Type II/IV secretion system protein 36 301 3.5E-69 T 15-10-2018 IPR001482 Type II/IV secretion system protein D934_10150 b598fe67c3af10d85decee9526e3b065 326 SMART SM00382 154 317 0.004 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_10150 b598fe67c3af10d85decee9526e3b065 326 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 28 322 1.5E-125 T 15-10-2018 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 D934_05045 14f2257d553d9aeb76c2733765ab6ece 459 SMART SM00382 57 348 4.7E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_05045 14f2257d553d9aeb76c2733765ab6ece 459 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 9 459 43.868 T 15-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 D934_05045 14f2257d553d9aeb76c2733765ab6ece 459 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 12 459 5.5E-201 T 15-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 D934_05045 14f2257d553d9aeb76c2733765ab6ece 459 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 61 107 3.5E-6 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D934_05045 14f2257d553d9aeb76c2733765ab6ece 459 SUPERFAMILY SSF52540 11 457 1.28E-91 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_05045 14f2257d553d9aeb76c2733765ab6ece 459 SMART SM01086 351 450 1.8E-29 T 15-10-2018 IPR019489 Clp ATPase, C-terminal D934_05045 14f2257d553d9aeb76c2733765ab6ece 459 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 351 421 1.1E-8 T 15-10-2018 IPR019489 Clp ATPase, C-terminal D934_05045 14f2257d553d9aeb76c2733765ab6ece 459 Gene3D G3DSA:1.10.8.60 351 456 3.0E-40 T 15-10-2018 D934_05045 14f2257d553d9aeb76c2733765ab6ece 459 Pfam PF07724 AAA domain (Cdc48 subfamily) 199 345 5.9E-40 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D934_03860 3a2178591eb1de4a6607154792878c8d 373 Hamap MF_00206 Lipoyl synthase [lipA]. 50 339 149.892 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D934_03860 3a2178591eb1de4a6607154792878c8d 373 Pfam PF04055 Radical SAM superfamily 103 267 5.0E-16 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D934_03860 3a2178591eb1de4a6607154792878c8d 373 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 49 86 2.6E-8 T 15-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D934_03860 3a2178591eb1de4a6607154792878c8d 373 PIRSF PIRSF005963 1 353 7.0E-141 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D934_03860 3a2178591eb1de4a6607154792878c8d 373 SUPERFAMILY SSF102114 68 332 2.49E-67 T 15-10-2018 D934_03860 3a2178591eb1de4a6607154792878c8d 373 TIGRFAM TIGR00510 lipA: lipoyl synthase 48 330 3.3E-132 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D934_03860 3a2178591eb1de4a6607154792878c8d 373 SMART SM00729 97 305 2.6E-18 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D934_03860 3a2178591eb1de4a6607154792878c8d 373 Gene3D G3DSA:3.20.20.70 92 342 1.4E-23 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_02035 c5ab24db59560be84cb6013aab00c55d 609 SUPERFAMILY SSF52540 78 364 4.54E-77 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_02035 c5ab24db59560be84cb6013aab00c55d 609 SMART SM00487 28 226 2.0E-62 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_02035 c5ab24db59560be84cb6013aab00c55d 609 Gene3D G3DSA:3.30.70.330 498 570 1.1E-13 T 15-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily D934_02035 c5ab24db59560be84cb6013aab00c55d 609 Gene3D G3DSA:3.40.50.300 9 215 1.1E-75 T 15-10-2018 D934_02035 c5ab24db59560be84cb6013aab00c55d 609 Pfam PF00270 DEAD/DEAH box helicase 34 198 7.0E-50 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D934_02035 c5ab24db59560be84cb6013aab00c55d 609 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 4 569 46.673 T 15-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 D934_02035 c5ab24db59560be84cb6013aab00c55d 609 Pfam PF03880 DbpA RNA binding domain 498 567 1.8E-23 T 15-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain D934_02035 c5ab24db59560be84cb6013aab00c55d 609 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 157 165 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D934_02035 c5ab24db59560be84cb6013aab00c55d 609 Pfam PF00271 Helicase conserved C-terminal domain 235 343 1.1E-29 T 15-10-2018 IPR001650 Helicase, C-terminal D934_02035 c5ab24db59560be84cb6013aab00c55d 609 SMART SM00490 262 343 2.3E-34 T 15-10-2018 IPR001650 Helicase, C-terminal D934_02035 c5ab24db59560be84cb6013aab00c55d 609 Gene3D G3DSA:3.40.50.300 217 434 4.0E-53 T 15-10-2018 D934_05445 14d6d2561e2caf45da76fe35c16cfd78 181 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 156 80.929 T 15-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 D934_05445 14d6d2561e2caf45da76fe35c16cfd78 181 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.2E-57 T 15-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 D934_05445 14d6d2561e2caf45da76fe35c16cfd78 181 Pfam PF03477 ATP cone domain 50 136 1.3E-12 T 15-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 D934_04980 369704506599f1fe6639aff4ab8de42c 381 Pfam PF00534 Glycosyl transferases group 1 188 349 8.9E-30 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 D934_04980 369704506599f1fe6639aff4ab8de42c 381 Gene3D G3DSA:3.40.50.2000 174 353 2.4E-41 T 15-10-2018 D934_04980 369704506599f1fe6639aff4ab8de42c 381 SUPERFAMILY SSF53756 7 375 2.49E-65 T 15-10-2018 D934_04980 369704506599f1fe6639aff4ab8de42c 381 Gene3D G3DSA:3.40.50.2000 2 166 3.6E-12 T 15-10-2018 D934_04980 369704506599f1fe6639aff4ab8de42c 381 Pfam PF13439 Glycosyltransferase Family 4 18 161 6.3E-12 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D934_11360 4f6e9c49bf708f857581a5c40e9c0fcb 104 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.365 T 15-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 D934_11360 4f6e9c49bf708f857581a5c40e9c0fcb 104 SUPERFAMILY SSF47729 1 91 7.07E-29 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D934_11360 4f6e9c49bf708f857581a5c40e9c0fcb 104 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 2.0E-41 T 15-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 D934_11360 4f6e9c49bf708f857581a5c40e9c0fcb 104 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 D934_11360 4f6e9c49bf708f857581a5c40e9c0fcb 104 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.8E-27 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_11360 4f6e9c49bf708f857581a5c40e9c0fcb 104 SMART SM00411 1 91 9.5E-39 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_11360 4f6e9c49bf708f857581a5c40e9c0fcb 104 Gene3D G3DSA:4.10.520.10 1 92 7.2E-31 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D934_11360 4f6e9c49bf708f857581a5c40e9c0fcb 104 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.0E-18 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_11360 4f6e9c49bf708f857581a5c40e9c0fcb 104 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.0E-18 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_11360 4f6e9c49bf708f857581a5c40e9c0fcb 104 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.0E-18 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 Gene3D G3DSA:3.40.50.880 176 397 2.6E-73 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 28 399 47.261 T 15-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 Pfam PF00117 Glutamine amidotransferase class-I 218 393 2.9E-45 T 15-10-2018 IPR017926 Glutamine amidotransferase D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 SMART SM01097 28 158 4.6E-88 T 15-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 30 156 3.2E-51 T 15-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 30 396 1.9E-142 T 15-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 Gene3D G3DSA:3.50.30.20 27 174 2.7E-57 T 15-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 SUPERFAMILY SSF52021 29 168 2.09E-55 T 15-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 PRINTS PR00096 Glutamine amidotransferase superfamily signature 370 383 3.9E-11 T 15-10-2018 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 PRINTS PR00096 Glutamine amidotransferase superfamily signature 285 296 3.9E-11 T 15-10-2018 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 PRINTS PR00096 Glutamine amidotransferase superfamily signature 257 266 3.9E-11 T 15-10-2018 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 SUPERFAMILY SSF52317 178 397 1.35E-61 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 PRINTS PR00097 Anthranilate synthase component II signature 370 383 1.3E-5 T 15-10-2018 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 PRINTS PR00097 Anthranilate synthase component II signature 257 266 1.3E-5 T 15-10-2018 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 PRINTS PR00097 Anthranilate synthase component II signature 285 296 1.3E-5 T 15-10-2018 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 254 268 2.7E-37 T 15-10-2018 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 285 301 2.7E-37 T 15-10-2018 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 215 229 2.7E-37 T 15-10-2018 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 302 319 2.7E-37 T 15-10-2018 D934_03105 8f6f537df855a7251acbcc31f5cc0f18 399 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 327 338 2.7E-37 T 15-10-2018 D934_07445 53b9500e7fb6891623edd892b6e16ff2 727 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 204 569 1.5E-88 T 15-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 D934_07445 53b9500e7fb6891623edd892b6e16ff2 727 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 555 702 6.3E-32 T 15-10-2018 IPR020992 Tail specific protease, C-terminal D934_07445 53b9500e7fb6891623edd892b6e16ff2 727 SUPERFAMILY SSF52096 171 554 1.82E-67 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D934_07445 53b9500e7fb6891623edd892b6e16ff2 727 Pfam PF03572 Peptidase family S41 366 548 1.1E-53 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D934_07445 53b9500e7fb6891623edd892b6e16ff2 727 Gene3D G3DSA:3.90.226.10 328 569 1.3E-59 T 15-10-2018 D934_07445 53b9500e7fb6891623edd892b6e16ff2 727 Gene3D G3DSA:2.30.42.10 238 322 5.0E-12 T 15-10-2018 D934_07445 53b9500e7fb6891623edd892b6e16ff2 727 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 242 320 1.2E-10 T 15-10-2018 IPR001478 PDZ domain GO:0005515 D934_07445 53b9500e7fb6891623edd892b6e16ff2 727 SUPERFAMILY SSF50156 247 319 2.51E-10 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 D934_07445 53b9500e7fb6891623edd892b6e16ff2 727 SMART SM00245 330 550 2.1E-49 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D934_07445 53b9500e7fb6891623edd892b6e16ff2 727 SMART SM00228 247 325 6.4E-6 T 15-10-2018 IPR001478 PDZ domain GO:0005515 D934_09980 eaca60049260bb2d722fec82a6688fc0 73 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 9 73 1.4E-32 T 15-10-2018 IPR012662 Conserved hypothetical protein CHP02449 D934_12465 57f9cf2521745d416505b9995374d8c9 806 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 181 1.2E-20 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain D934_12465 57f9cf2521745d416505b9995374d8c9 806 Pfam PF00593 TonB dependent receptor 297 794 1.3E-43 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D934_12465 57f9cf2521745d416505b9995374d8c9 806 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 53 - T 15-10-2018 IPR010916 TonB box, conserved site D934_12465 57f9cf2521745d416505b9995374d8c9 806 Gene3D G3DSA:2.170.130.10 41 185 9.8E-34 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D934_12465 57f9cf2521745d416505b9995374d8c9 806 SUPERFAMILY SSF56935 46 806 2.12E-96 T 15-10-2018 D934_12465 57f9cf2521745d416505b9995374d8c9 806 Gene3D G3DSA:2.40.170.20 289 792 5.7E-53 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D934_05385 642f6de7949cebef165c3bf3f47d6c32 159 Pfam PF00578 AhpC/TSA family 21 135 1.3E-28 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D934_05385 642f6de7949cebef165c3bf3f47d6c32 159 PIRSF PIRSF000239 3 159 1.0E-25 T 15-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D934_05385 642f6de7949cebef165c3bf3f47d6c32 159 SUPERFAMILY SSF52833 18 156 2.29E-43 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_05385 642f6de7949cebef165c3bf3f47d6c32 159 Gene3D G3DSA:3.40.30.10 1 159 1.5E-48 T 15-10-2018 D934_11735 c762767be294241706161465e7912b3f 232 Gene3D G3DSA:1.10.287.460 23 88 1.0E-17 T 15-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 D934_11735 c762767be294241706161465e7912b3f 232 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 144 229 7.7E-7 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D934_11735 c762767be294241706161465e7912b3f 232 Gene3D G3DSA:3.10.50.40 92 232 7.0E-21 T 15-10-2018 D934_11735 c762767be294241706161465e7912b3f 232 SUPERFAMILY SSF54534 27 232 7.46E-37 T 15-10-2018 D934_11735 c762767be294241706161465e7912b3f 232 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 17 135 5.1E-26 T 15-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 D934_12500 ed2aed9284dce0f77506f895faeb953c 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 18 282 2.4E-89 T 15-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 D934_12500 ed2aed9284dce0f77506f895faeb953c 287 Gene3D G3DSA:1.10.3720.10 63 283 4.4E-25 T 15-10-2018 IPR035906 MetI-like superfamily D934_12500 ed2aed9284dce0f77506f895faeb953c 287 SUPERFAMILY SSF161098 25 273 6.64E-30 T 15-10-2018 IPR035906 MetI-like superfamily D934_12500 ed2aed9284dce0f77506f895faeb953c 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 278 4.5E-20 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D934_03555 1215960cedba8d0a8f716fa996418d79 108 Gene3D G3DSA:3.40.30.10 1 107 3.6E-16 T 15-10-2018 D934_03555 1215960cedba8d0a8f716fa996418d79 108 Pfam PF00085 Thioredoxin 6 105 2.1E-12 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 D934_03555 1215960cedba8d0a8f716fa996418d79 108 SUPERFAMILY SSF52833 3 107 1.26E-18 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_04315 90692f5fb230ebac6833d5287c30ee93 640 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 597 639 5.8E-15 T 15-10-2018 IPR020011 Motility protein FimV, C-terminal D934_04315 90692f5fb230ebac6833d5287c30ee93 640 Gene3D G3DSA:1.20.58.2200 586 640 8.3E-13 T 15-10-2018 IPR038440 FimV, C-terminal domain superfamily D934_04315 90692f5fb230ebac6833d5287c30ee93 640 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 266 339 6.2E-20 T 15-10-2018 IPR020012 Motility protein FimV, N-terminal D934_03215 66167f35748cd718a957c8494ba07280 485 SUPERFAMILY SSF111283 24 483 2.22E-130 T 15-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 D934_03215 66167f35748cd718a957c8494ba07280 485 Pfam PF01523 Putative modulator of DNA gyrase 40 335 1.6E-72 T 15-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 D934_03215 66167f35748cd718a957c8494ba07280 485 PIRSF PIRSF004919 20 484 2.1E-136 T 15-10-2018 IPR025502 TldD D934_03215 66167f35748cd718a957c8494ba07280 485 Gene3D G3DSA:3.30.2290.10 21 243 5.7E-23 T 15-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal D934_04815 f0d3369760110a014855d31ed62e19c4 215 Pfam PF01323 DSBA-like thioredoxin domain 51 197 1.4E-8 T 15-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 D934_04815 f0d3369760110a014855d31ed62e19c4 215 SUPERFAMILY SSF52833 28 199 3.65E-32 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_04815 f0d3369760110a014855d31ed62e19c4 215 Gene3D G3DSA:3.40.30.10 23 215 1.4E-48 T 15-10-2018 D934_04815 f0d3369760110a014855d31ed62e19c4 215 PIRSF PIRSF001488 6 212 1.5E-27 T 15-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL D934_04815 f0d3369760110a014855d31ed62e19c4 215 ProSitePatterns PS00194 Thioredoxin family active site. 51 69 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 D934_01995 aff7a47b91601388aee67662fc9225b3 144 SUPERFAMILY SSF46785 22 137 6.34E-36 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_01995 aff7a47b91601388aee67662fc9225b3 144 Gene3D G3DSA:1.10.10.10 16 134 3.4E-44 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_01995 aff7a47b91601388aee67662fc9225b3 144 Pfam PF01638 HxlR-like helix-turn-helix 35 122 1.7E-29 T 15-10-2018 IPR002577 Helix-turn-helix, HxlR type D934_05940 0dbcd2ae086dd94a045072e1e5c99c45 794 SUPERFAMILY SSF53955 50 268 1.18E-61 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_05940 0dbcd2ae086dd94a045072e1e5c99c45 794 Gene3D G3DSA:1.10.3810.10 66 260 6.7E-49 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_05940 0dbcd2ae086dd94a045072e1e5c99c45 794 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 50 792 2.2E-223 T 15-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_05940 0dbcd2ae086dd94a045072e1e5c99c45 794 SUPERFAMILY SSF56601 219 641 1.82E-94 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D934_05940 0dbcd2ae086dd94a045072e1e5c99c45 794 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 706 790 2.3E-15 T 15-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_05940 0dbcd2ae086dd94a045072e1e5c99c45 794 Gene3D G3DSA:3.40.710.10 264 618 1.2E-67 T 15-10-2018 D934_05940 0dbcd2ae086dd94a045072e1e5c99c45 794 Pfam PF00912 Transglycosylase 71 237 1.0E-44 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_05940 0dbcd2ae086dd94a045072e1e5c99c45 794 Pfam PF00905 Penicillin binding protein transpeptidase domain 314 533 2.5E-12 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 D934_13000 f962835ec1acde941480ff778e182f59 507 Gene3D G3DSA:1.50.10.10 68 504 2.8E-165 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 D934_13000 f962835ec1acde941480ff778e182f59 507 Pfam PF06824 Metal-independent alpha-mannosidase (GH125) 84 486 6.4E-149 T 15-10-2018 IPR008313 Metal-independent alpha-mannosidase D934_13000 f962835ec1acde941480ff778e182f59 507 SUPERFAMILY SSF48208 55 498 1.15E-164 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 D934_13000 f962835ec1acde941480ff778e182f59 507 PIRSF PIRSF028846 62 497 7.5E-198 T 15-10-2018 IPR008313 Metal-independent alpha-mannosidase D934_13000 f962835ec1acde941480ff778e182f59 507 SMART SM01149 84 487 1.1E-241 T 15-10-2018 IPR008313 Metal-independent alpha-mannosidase D934_13210 a6fe25fde35930d46cb5618f6262e17b 328 Pfam PF01795 MraW methylase family 16 320 4.8E-98 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 D934_13210 a6fe25fde35930d46cb5618f6262e17b 328 Gene3D G3DSA:1.10.150.170 121 228 8.7E-96 T 15-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 D934_13210 a6fe25fde35930d46cb5618f6262e17b 328 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 17 320 1.6E-100 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 D934_13210 a6fe25fde35930d46cb5618f6262e17b 328 SUPERFAMILY SSF53335 18 321 1.21E-44 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_13210 a6fe25fde35930d46cb5618f6262e17b 328 Gene3D G3DSA:3.40.50.150 21 320 8.7E-96 T 15-10-2018 D934_13210 a6fe25fde35930d46cb5618f6262e17b 328 SUPERFAMILY SSF81799 123 227 5.1E-33 T 15-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 D934_13210 a6fe25fde35930d46cb5618f6262e17b 328 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 18 321 36.96 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 D934_13210 a6fe25fde35930d46cb5618f6262e17b 328 PIRSF PIRSF004486 12 322 1.0E-95 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 D934_13630 a03b1fca52737a6cb44a048796a4e283 351 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 18 348 2.0E-65 T 15-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13630 a03b1fca52737a6cb44a048796a4e283 351 Pfam PF01565 FAD binding domain 52 163 2.5E-15 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 D934_13630 a03b1fca52737a6cb44a048796a4e283 351 Gene3D G3DSA:3.90.78.10 236 351 3.8E-41 T 15-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13630 a03b1fca52737a6cb44a048796a4e283 351 SUPERFAMILY SSF56194 220 349 7.32E-43 T 15-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13630 a03b1fca52737a6cb44a048796a4e283 351 Gene3D G3DSA:3.30.43.10 11 80 9.7E-16 T 15-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 D934_13630 a03b1fca52737a6cb44a048796a4e283 351 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 351 77.926 T 15-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13630 a03b1fca52737a6cb44a048796a4e283 351 SUPERFAMILY SSF56176 18 203 1.53E-36 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D934_13630 a03b1fca52737a6cb44a048796a4e283 351 Gene3D G3DSA:3.30.465.10 83 235 2.5E-51 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D934_13630 a03b1fca52737a6cb44a048796a4e283 351 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 223 347 2.5E-32 T 15-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_05610 6b7bcd01460bfd3cede00150bdc52cc1 297 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 187 215 - T 15-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 D934_05610 6b7bcd01460bfd3cede00150bdc52cc1 297 Pfam PF01464 Transglycosylase SLT domain 173 267 1.3E-26 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 D934_05610 6b7bcd01460bfd3cede00150bdc52cc1 297 SUPERFAMILY SSF53955 161 289 1.29E-44 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_05610 6b7bcd01460bfd3cede00150bdc52cc1 297 Gene3D G3DSA:1.10.530.10 158 290 2.0E-41 T 15-10-2018 D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 Gene3D G3DSA:3.50.7.10 192 372 5.4E-236 T 15-10-2018 IPR027409 GroEL-like apical domain superfamily D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 PRINTS PR00298 60kDa chaperonin signature 27 53 1.3E-73 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 PRINTS PR00298 60kDa chaperonin signature 83 110 1.3E-73 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 PRINTS PR00298 60kDa chaperonin signature 350 375 1.3E-73 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 PRINTS PR00298 60kDa chaperonin signature 268 291 1.3E-73 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 PRINTS PR00298 60kDa chaperonin signature 398 419 1.3E-73 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 SUPERFAMILY SSF52029 184 376 5.41E-83 T 15-10-2018 IPR027409 GroEL-like apical domain superfamily D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 15-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 545 40.805 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.0E-252 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.9E-95 T 15-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 Gene3D G3DSA:3.30.260.10 136 410 5.4E-236 T 15-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 Gene3D G3DSA:1.10.560.10 8 521 5.4E-236 T 15-10-2018 IPR027413 GroEL-like equatorial domain superfamily D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 SUPERFAMILY SSF54849 137 204 1.79E-25 T 15-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily D934_11805 f7cdd3815f025a365f97163c5f3b13ba 547 SUPERFAMILY SSF48592 7 521 4.5E-77 T 15-10-2018 IPR027413 GroEL-like equatorial domain superfamily D934_13465 79c2ae4df6a8200b86f0c3ce379d59f0 463 Gene3D G3DSA:1.20.81.30 315 425 6.4E-27 T 15-10-2018 D934_13465 79c2ae4df6a8200b86f0c3ce379d59f0 463 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 223 251 - T 15-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 D934_13465 79c2ae4df6a8200b86f0c3ce379d59f0 463 PRINTS PR00812 Bacterial general secretion pathway protein F signature 427 441 1.2E-17 T 15-10-2018 IPR003004 GspF/PilC family D934_13465 79c2ae4df6a8200b86f0c3ce379d59f0 463 PRINTS PR00812 Bacterial general secretion pathway protein F signature 223 251 1.2E-17 T 15-10-2018 IPR003004 GspF/PilC family D934_13465 79c2ae4df6a8200b86f0c3ce379d59f0 463 PRINTS PR00812 Bacterial general secretion pathway protein F signature 443 462 1.2E-17 T 15-10-2018 IPR003004 GspF/PilC family D934_13465 79c2ae4df6a8200b86f0c3ce379d59f0 463 PRINTS PR00812 Bacterial general secretion pathway protein F signature 124 136 1.2E-17 T 15-10-2018 IPR003004 GspF/PilC family D934_13465 79c2ae4df6a8200b86f0c3ce379d59f0 463 Gene3D G3DSA:1.20.81.30 115 230 1.0E-30 T 15-10-2018 D934_13465 79c2ae4df6a8200b86f0c3ce379d59f0 463 Pfam PF00482 Type II secretion system (T2SS), protein F 332 454 7.6E-29 T 15-10-2018 IPR018076 Type II secretion system F domain D934_13465 79c2ae4df6a8200b86f0c3ce379d59f0 463 Pfam PF00482 Type II secretion system (T2SS), protein F 128 251 1.5E-31 T 15-10-2018 IPR018076 Type II secretion system F domain D934_13370 c9d568fcceaed5e64f37f938032417f0 134 Pfam PF00816 H-NS histone family 18 112 3.5E-17 T 15-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 D934_13370 c9d568fcceaed5e64f37f938032417f0 134 SUPERFAMILY SSF81273 82 113 5.89E-6 T 15-10-2018 D934_13370 c9d568fcceaed5e64f37f938032417f0 134 Gene3D G3DSA:3.30.160.510 62 125 2.1E-31 T 15-10-2018 D934_13370 c9d568fcceaed5e64f37f938032417f0 134 SMART SM00528 79 122 1.5E-4 T 15-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 D934_00070 2e8044ab1cb4516fbfbd1a856dcfbb28 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 1.0E-18 T 15-10-2018 IPR022569 Ferredoxin, C-terminal D934_00070 2e8044ab1cb4516fbfbd1a856dcfbb28 107 Pfam PF00037 4Fe-4S binding domain 34 56 3.5E-7 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D934_00070 2e8044ab1cb4516fbfbd1a856dcfbb28 107 Gene3D G3DSA:3.30.70.20 2 97 1.4E-30 T 15-10-2018 D934_00070 2e8044ab1cb4516fbfbd1a856dcfbb28 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.4E-17 T 15-10-2018 IPR000813 7Fe ferredoxin GO:0009055 D934_00070 2e8044ab1cb4516fbfbd1a856dcfbb28 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.4E-17 T 15-10-2018 IPR000813 7Fe ferredoxin GO:0009055 D934_00070 2e8044ab1cb4516fbfbd1a856dcfbb28 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.4E-17 T 15-10-2018 IPR000813 7Fe ferredoxin GO:0009055 D934_00070 2e8044ab1cb4516fbfbd1a856dcfbb28 107 SUPERFAMILY SSF54862 2 84 1.07E-23 T 15-10-2018 D934_00070 2e8044ab1cb4516fbfbd1a856dcfbb28 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D934_09815 b1b67b0999fe03d4c2c77963966f206f 155 Pfam PF00588 SpoU rRNA Methylase family 8 145 1.3E-31 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 D934_09815 b1b67b0999fe03d4c2c77963966f206f 155 Gene3D G3DSA:3.40.1280.10 2 155 1.1E-60 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D934_09815 b1b67b0999fe03d4c2c77963966f206f 155 PIRSF PIRSF029256 5 155 1.1E-61 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 D934_09815 b1b67b0999fe03d4c2c77963966f206f 155 SUPERFAMILY SSF75217 8 154 4.51E-43 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases D934_09815 b1b67b0999fe03d4c2c77963966f206f 155 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 6 155 32.157 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 D934_10400 c17a6bd0056a35810e1581e0c23a04ea 229 Gene3D G3DSA:3.30.420.40 94 185 9.4E-64 T 15-10-2018 D934_10400 c17a6bd0056a35810e1581e0c23a04ea 229 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 8.7E-51 T 15-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 D934_10400 c17a6bd0056a35810e1581e0c23a04ea 229 SUPERFAMILY SSF53067 3 102 4.32E-28 T 15-10-2018 D934_10400 c17a6bd0056a35810e1581e0c23a04ea 229 Gene3D G3DSA:3.30.420.40 3 216 9.4E-64 T 15-10-2018 D934_10400 c17a6bd0056a35810e1581e0c23a04ea 229 SUPERFAMILY SSF53067 107 214 4.92E-19 T 15-10-2018 D934_10400 c17a6bd0056a35810e1581e0c23a04ea 229 Pfam PF00814 Glycoprotease family 28 147 1.2E-28 T 15-10-2018 IPR000905 Gcp-like domain D934_04080 1e08ca07e93f6ac4b6c119d605172cda 192 Pfam PF00583 Acetyltransferase (GNAT) family 18 128 1.8E-5 T 15-10-2018 IPR000182 GNAT domain D934_04080 1e08ca07e93f6ac4b6c119d605172cda 192 PIRSF PIRSF028520 1 164 2.4E-80 T 15-10-2018 IPR016890 Uncharacterised conserved protein UCP028520 D934_04080 1e08ca07e93f6ac4b6c119d605172cda 192 Gene3D G3DSA:3.40.630.30 1 164 6.3E-15 T 15-10-2018 D934_04080 1e08ca07e93f6ac4b6c119d605172cda 192 SUPERFAMILY SSF55729 1 151 3.72E-17 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase D934_00445 edf64cb6166032de132885d4b481481b 253 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 72 81 - T 15-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D934_00445 edf64cb6166032de132885d4b481481b 253 Pfam PF03167 Uracil DNA glycosylase superfamily 69 223 7.5E-22 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D934_00445 edf64cb6166032de132885d4b481481b 253 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 20 228 3.8E-78 T 15-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D934_00445 edf64cb6166032de132885d4b481481b 253 Gene3D G3DSA:3.40.470.10 3 242 7.8E-92 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D934_00445 edf64cb6166032de132885d4b481481b 253 SMART SM00986 64 224 1.5E-36 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D934_00445 edf64cb6166032de132885d4b481481b 253 SUPERFAMILY SSF52141 16 236 2.05E-88 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D934_00445 edf64cb6166032de132885d4b481481b 253 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 19 235 37.919 T 15-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D934_00445 edf64cb6166032de132885d4b481481b 253 SMART SM00987 64 224 1.5E-36 T 15-10-2018 D934_03335 77f8d99605b14cdbeaebec54772a8e0a 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 15-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03335 77f8d99605b14cdbeaebec54772a8e0a 275 SMART SM01382 124 253 1.6E-89 T 15-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 D934_03335 77f8d99605b14cdbeaebec54772a8e0a 275 SUPERFAMILY SSF50249 3 125 6.85E-47 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_03335 77f8d99605b14cdbeaebec54772a8e0a 275 Gene3D G3DSA:2.40.50.140 1 114 3.7E-46 T 15-10-2018 D934_03335 77f8d99605b14cdbeaebec54772a8e0a 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 3.3E-131 T 15-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 D934_03335 77f8d99605b14cdbeaebec54772a8e0a 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.6E-33 T 15-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03335 77f8d99605b14cdbeaebec54772a8e0a 275 PIRSF PIRSF002158 9 275 9.0E-98 T 15-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03335 77f8d99605b14cdbeaebec54772a8e0a 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 4.0E-54 T 15-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 D934_03335 77f8d99605b14cdbeaebec54772a8e0a 275 Gene3D G3DSA:2.30.30.30 115 195 9.1E-31 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 D934_03335 77f8d99605b14cdbeaebec54772a8e0a 275 Gene3D G3DSA:4.10.950.10 196 274 1.2E-34 T 15-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03335 77f8d99605b14cdbeaebec54772a8e0a 275 SMART SM01383 42 118 4.6E-42 T 15-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03335 77f8d99605b14cdbeaebec54772a8e0a 275 SUPERFAMILY SSF50104 126 272 3.01E-57 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily D934_03335 77f8d99605b14cdbeaebec54772a8e0a 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 46.107 T 15-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 D934_10345 96f0f626e567763649f85b48e970440c 265 Gene3D G3DSA:3.40.50.720 1 265 7.8E-81 T 15-10-2018 D934_10345 96f0f626e567763649f85b48e970440c 265 SUPERFAMILY SSF69572 8 260 1.29E-50 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 D934_10345 96f0f626e567763649f85b48e970440c 265 Pfam PF00899 ThiF family 22 161 1.2E-29 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 D934_03395 80290f014a70f256b94ed7bfd395ec42 175 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 152 160 - T 15-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03395 80290f014a70f256b94ed7bfd395ec42 175 SUPERFAMILY SSF56053 1 80 4.5E-19 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03395 80290f014a70f256b94ed7bfd395ec42 175 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 174 1.2E-67 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D934_03395 80290f014a70f256b94ed7bfd395ec42 175 PRINTS PR00059 Ribosomal protein L6 signature 139 160 6.4E-33 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D934_03395 80290f014a70f256b94ed7bfd395ec42 175 PRINTS PR00059 Ribosomal protein L6 signature 69 94 6.4E-33 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D934_03395 80290f014a70f256b94ed7bfd395ec42 175 PRINTS PR00059 Ribosomal protein L6 signature 97 113 6.4E-33 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D934_03395 80290f014a70f256b94ed7bfd395ec42 175 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 174 36.121 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D934_03395 80290f014a70f256b94ed7bfd395ec42 175 Gene3D G3DSA:3.90.930.12 1 80 1.3E-21 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03395 80290f014a70f256b94ed7bfd395ec42 175 Pfam PF00347 Ribosomal protein L6 11 79 1.0E-13 T 15-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03395 80290f014a70f256b94ed7bfd395ec42 175 Pfam PF00347 Ribosomal protein L6 88 162 1.7E-18 T 15-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03395 80290f014a70f256b94ed7bfd395ec42 175 SUPERFAMILY SSF56053 81 174 2.07E-34 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03395 80290f014a70f256b94ed7bfd395ec42 175 PIRSF PIRSF002162 1 175 8.0E-47 T 15-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03395 80290f014a70f256b94ed7bfd395ec42 175 Gene3D G3DSA:3.90.930.12 81 175 1.5E-37 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 TIGRFAM TIGR01273 speA: arginine decarboxylase 3 623 4.6E-269 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PIRSF PIRSF001336 1 625 3.0E-239 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 Gene3D G3DSA:1.20.58.930 361 452 8.8E-214 T 15-10-2018 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 Gene3D G3DSA:2.40.37.10 12 559 8.8E-214 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 SUPERFAMILY SSF51419 64 341 6.73E-61 T 15-10-2018 IPR029066 PLP-binding barrel D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PRINTS PR01180 Arginine decarboxylase signature 534 555 3.6E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PRINTS PR01180 Arginine decarboxylase signature 88 102 3.6E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PRINTS PR01180 Arginine decarboxylase signature 168 189 3.6E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PRINTS PR01180 Arginine decarboxylase signature 192 214 3.6E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PRINTS PR01180 Arginine decarboxylase signature 319 336 3.6E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PRINTS PR01180 Arginine decarboxylase signature 456 477 3.6E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PRINTS PR01180 Arginine decarboxylase signature 481 506 3.6E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PRINTS PR01180 Arginine decarboxylase signature 64 79 3.6E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PRINTS PR01180 Arginine decarboxylase signature 142 157 3.6E-66 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 SUPERFAMILY SSF50621 449 560 6.38E-6 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 270 286 - T 15-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 74 339 1.0E-44 T 15-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 1 624 41.014 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 Gene3D G3DSA:3.20.20.10 65 344 8.8E-214 T 15-10-2018 IPR029066 PLP-binding barrel D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 329 348 5.3E-15 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 96 114 5.3E-15 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 235 248 5.3E-15 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 534 547 5.3E-15 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D934_01545 48278f13b04d4d323ec70c7ae4639aee 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 119 131 5.3E-15 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D934_02215 c2254110e1f6c18b6fe228c0c22fc414 132 Pfam PF01850 PIN domain 4 92 2.1E-6 T 15-10-2018 IPR002716 PIN domain D934_02215 c2254110e1f6c18b6fe228c0c22fc414 132 Gene3D G3DSA:3.40.50.1010 1 97 3.6E-7 T 15-10-2018 D934_02215 c2254110e1f6c18b6fe228c0c22fc414 132 SUPERFAMILY SSF88723 3 119 4.25E-9 T 15-10-2018 IPR029060 PIN-like domain superfamily D934_08425 c4ed6ba352379d7e6a38866f8107acb7 354 SUPERFAMILY SSF47413 31 91 6.17E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_08425 c4ed6ba352379d7e6a38866f8107acb7 354 Gene3D G3DSA:2.10.109.10 240 351 3.8E-7 T 15-10-2018 D934_08425 c4ed6ba352379d7e6a38866f8107acb7 354 Pfam PF01381 Helix-turn-helix 35 88 5.6E-13 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_08425 c4ed6ba352379d7e6a38866f8107acb7 354 Gene3D G3DSA:1.10.260.40 29 94 1.3E-23 T 15-10-2018 D934_08425 c4ed6ba352379d7e6a38866f8107acb7 354 SMART SM00530 34 88 6.8E-14 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_08425 c4ed6ba352379d7e6a38866f8107acb7 354 SUPERFAMILY SSF51306 256 345 2.62E-15 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily D934_08425 c4ed6ba352379d7e6a38866f8107acb7 354 Pfam PF00717 Peptidase S24-like 271 334 4.3E-8 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D934_13155 845218c86b739d06cebaf6fac474e214 411 Pfam PF14450 Cell division protein FtsA 208 375 4.4E-24 T 15-10-2018 D934_13155 845218c86b739d06cebaf6fac474e214 411 Gene3D G3DSA:3.30.420.40 13 371 6.7E-120 T 15-10-2018 D934_13155 845218c86b739d06cebaf6fac474e214 411 Pfam PF14450 Cell division protein FtsA 11 181 1.6E-11 T 15-10-2018 D934_13155 845218c86b739d06cebaf6fac474e214 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 411 30.482 T 15-10-2018 IPR020823 Cell division protein FtsA D934_13155 845218c86b739d06cebaf6fac474e214 411 Gene3D G3DSA:3.30.1490.110 87 170 6.7E-120 T 15-10-2018 D934_13155 845218c86b739d06cebaf6fac474e214 411 SMART SM00842 10 197 1.1E-97 T 15-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 D934_13155 845218c86b739d06cebaf6fac474e214 411 Gene3D G3DSA:3.30.420.40 198 353 6.7E-120 T 15-10-2018 D934_13155 845218c86b739d06cebaf6fac474e214 411 SUPERFAMILY SSF53067 9 198 1.25E-58 T 15-10-2018 D934_13155 845218c86b739d06cebaf6fac474e214 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 2.0E-159 T 15-10-2018 IPR020823 Cell division protein FtsA D934_13155 845218c86b739d06cebaf6fac474e214 411 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.6E-28 T 15-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 D934_13155 845218c86b739d06cebaf6fac474e214 411 Gene3D G3DSA:3.90.640.10 236 301 6.7E-120 T 15-10-2018 D934_13155 845218c86b739d06cebaf6fac474e214 411 PIRSF PIRSF003101 1 411 5.3E-148 T 15-10-2018 IPR020823 Cell division protein FtsA D934_13155 845218c86b739d06cebaf6fac474e214 411 SUPERFAMILY SSF53067 200 378 3.11E-45 T 15-10-2018 D934_01940 24dc99afaf23eb8daa479c4d3efcf780 281 SUPERFAMILY SSF52374 4 280 3.07E-98 T 15-10-2018 D934_01940 24dc99afaf23eb8daa479c4d3efcf780 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 5 279 4.9E-88 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 D934_01940 24dc99afaf23eb8daa479c4d3efcf780 281 Gene3D G3DSA:3.30.1300.10 180 281 1.4E-26 T 15-10-2018 D934_01940 24dc99afaf23eb8daa479c4d3efcf780 281 Hamap MF_00158 Pantothenate synthetase [panC]. 3 281 37.645 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 D934_01940 24dc99afaf23eb8daa479c4d3efcf780 281 Pfam PF02569 Pantoate-beta-alanine ligase 5 279 4.6E-94 T 15-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 D934_01940 24dc99afaf23eb8daa479c4d3efcf780 281 Gene3D G3DSA:3.40.50.620 1 179 3.8E-69 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_00195 ea3edcd23a2ec1f9423f5a81d944aa78 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 95 2.0E-12 T 15-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_00195 ea3edcd23a2ec1f9423f5a81d944aa78 122 SUPERFAMILY SSF54736 52 122 3.49E-22 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D934_00195 ea3edcd23a2ec1f9423f5a81d944aa78 122 SUPERFAMILY SSF48300 4 59 2.75E-16 T 15-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_00195 ea3edcd23a2ec1f9423f5a81d944aa78 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 1.1E-17 T 15-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_00195 ea3edcd23a2ec1f9423f5a81d944aa78 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 23.726 T 15-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_00195 ea3edcd23a2ec1f9423f5a81d944aa78 122 Gene3D G3DSA:1.20.5.710 2 52 2.8E-19 T 15-10-2018 D934_00195 ea3edcd23a2ec1f9423f5a81d944aa78 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 3.1E-41 T 15-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_00195 ea3edcd23a2ec1f9423f5a81d944aa78 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 122 8.4E-25 T 15-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_00195 ea3edcd23a2ec1f9423f5a81d944aa78 122 Gene3D G3DSA:3.30.1390.10 53 122 2.5E-26 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D934_07360 611e3992a22a1afb4e4e804edfdfdfff 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 3.9E-31 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family D934_07360 611e3992a22a1afb4e4e804edfdfdfff 107 PIRSF PIRSF004555 2 107 3.8E-35 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family D934_07360 611e3992a22a1afb4e4e804edfdfdfff 107 Pfam PF02575 YbaB/EbfC DNA-binding family 10 97 9.5E-32 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family D934_07360 611e3992a22a1afb4e4e804edfdfdfff 107 Gene3D G3DSA:3.30.1310.10 1 107 8.4E-41 T 15-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily D934_07360 611e3992a22a1afb4e4e804edfdfdfff 107 SUPERFAMILY SSF82607 10 101 1.44E-30 T 15-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily D934_07360 611e3992a22a1afb4e4e804edfdfdfff 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 96 21.605 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 Gene3D G3DSA:1.10.730.10 11 810 0.0 T 15-10-2018 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 8 878 0.0 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 434 590 1.4E-7 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 636 674 3.0E-6 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 SUPERFAMILY SSF50677 229 432 1.67E-49 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 Pfam PF08264 Anticodon-binding domain of tRNA 717 840 8.4E-15 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 Gene3D G3DSA:3.10.20.590 818 878 3.3E-20 T 15-10-2018 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 7 878 23.227 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 541 563 7.7E-46 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 156 172 7.7E-46 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 188 201 7.7E-46 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 130 147 7.7E-46 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 504 522 7.7E-46 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 218 237 7.7E-46 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 PRINTS PR00985 Leucyl-tRNA synthetase signature 574 584 7.7E-46 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 Gene3D G3DSA:3.90.740.10 230 431 0.0 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 Gene3D G3DSA:3.40.50.620 36 583 0.0 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 Pfam PF09334 tRNA synthetases class I (M) 42 174 5.3E-19 T 15-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 Gene3D G3DSA:3.10.330.110 584 646 0.0 T 15-10-2018 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 SUPERFAMILY SSF52374 7 684 2.5E-144 T 15-10-2018 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 224 419 7.4E-68 T 15-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 D934_12620 b4186d96712da6ad265cc22937a2ae8c 879 SUPERFAMILY SSF47323 681 877 1.33E-30 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_10980 497fd5cb486159d6d0d6d50c73902e66 130 Gene3D G3DSA:3.30.530.20 1 125 5.0E-22 T 15-10-2018 IPR023393 START-like domain superfamily D934_10980 497fd5cb486159d6d0d6d50c73902e66 130 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 1 118 8.7E-25 T 15-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 D934_10980 497fd5cb486159d6d0d6d50c73902e66 130 SUPERFAMILY SSF55961 1 123 1.19E-22 T 15-10-2018 D934_05025 ac4353003fdcafe8ecb70b4866650369 284 SUPERFAMILY SSF54506 149 282 1.13E-46 T 15-10-2018 D934_05025 ac4353003fdcafe8ecb70b4866650369 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 11 281 3.4E-75 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D934_05025 ac4353003fdcafe8ecb70b4866650369 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 73 87 - T 15-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D934_05025 ac4353003fdcafe8ecb70b4866650369 284 Pfam PF01678 Diaminopimelate epimerase 12 131 3.4E-22 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D934_05025 ac4353003fdcafe8ecb70b4866650369 284 Pfam PF01678 Diaminopimelate epimerase 162 272 2.2E-23 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D934_05025 ac4353003fdcafe8ecb70b4866650369 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 10 284 35.732 T 15-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D934_05025 ac4353003fdcafe8ecb70b4866650369 284 Gene3D G3DSA:3.10.310.10 12 280 3.3E-89 T 15-10-2018 D934_05025 ac4353003fdcafe8ecb70b4866650369 284 Gene3D G3DSA:3.10.310.10 124 271 3.3E-89 T 15-10-2018 D934_05025 ac4353003fdcafe8ecb70b4866650369 284 SUPERFAMILY SSF54506 10 139 9.73E-40 T 15-10-2018 D934_10930 fc623a395a9d5ed77e6f49726efafe7a 237 SUPERFAMILY SSF52172 9 134 4.41E-40 T 15-10-2018 IPR011006 CheY-like superfamily D934_10930 fc623a395a9d5ed77e6f49726efafe7a 237 Gene3D G3DSA:3.40.50.2300 2 130 2.8E-37 T 15-10-2018 D934_10930 fc623a395a9d5ed77e6f49726efafe7a 237 Pfam PF00072 Response regulator receiver domain 11 121 8.9E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_10930 fc623a395a9d5ed77e6f49726efafe7a 237 SMART SM00862 155 229 2.3E-14 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D934_10930 fc623a395a9d5ed77e6f49726efafe7a 237 Gene3D G3DSA:1.10.10.10 134 234 1.9E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_10930 fc623a395a9d5ed77e6f49726efafe7a 237 SUPERFAMILY SSF46894 130 230 3.12E-21 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D934_10930 fc623a395a9d5ed77e6f49726efafe7a 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 1.2E-16 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D934_10930 fc623a395a9d5ed77e6f49726efafe7a 237 SMART SM00448 9 121 3.2E-40 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_11590 c5e79c90885b49d6e09f05c6d04fe9b1 452 Gene3D G3DSA:3.60.120.10 1 451 1.1E-153 T 15-10-2018 IPR005801 ADC synthase GO:0009058 D934_11590 c5e79c90885b49d6e09f05c6d04fe9b1 452 Pfam PF04715 Anthranilate synthase component I, N terminal region 16 141 2.1E-4 T 15-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_11590 c5e79c90885b49d6e09f05c6d04fe9b1 452 PRINTS PR00095 Anthranilate synthase component I signature 289 302 2.8E-18 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_11590 c5e79c90885b49d6e09f05c6d04fe9b1 452 PRINTS PR00095 Anthranilate synthase component I signature 383 397 2.8E-18 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_11590 c5e79c90885b49d6e09f05c6d04fe9b1 452 PRINTS PR00095 Anthranilate synthase component I signature 303 316 2.8E-18 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_11590 c5e79c90885b49d6e09f05c6d04fe9b1 452 PRINTS PR00095 Anthranilate synthase component I signature 398 412 2.8E-18 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_11590 c5e79c90885b49d6e09f05c6d04fe9b1 452 SUPERFAMILY SSF56322 6 449 9.55E-121 T 15-10-2018 IPR005801 ADC synthase GO:0009058 D934_11590 c5e79c90885b49d6e09f05c6d04fe9b1 452 Pfam PF00425 chorismate binding enzyme 189 441 1.3E-87 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal D934_11590 c5e79c90885b49d6e09f05c6d04fe9b1 452 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 97 443 1.9E-126 T 15-10-2018 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I D934_05455 eadb40d0d7111882c9b54db4027eb943 440 Pfam PF00464 Serine hydroxymethyltransferase 32 409 1.1E-178 T 15-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D934_05455 eadb40d0d7111882c9b54db4027eb943 440 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 30 440 51.97 T 15-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D934_05455 eadb40d0d7111882c9b54db4027eb943 440 Gene3D G3DSA:3.40.640.10 60 312 2.1E-183 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D934_05455 eadb40d0d7111882c9b54db4027eb943 440 SUPERFAMILY SSF53383 30 439 4.17E-175 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D934_05455 eadb40d0d7111882c9b54db4027eb943 440 Gene3D G3DSA:3.90.1150.10 34 416 2.1E-183 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D934_05455 eadb40d0d7111882c9b54db4027eb943 440 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 244 260 - T 15-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D934_05455 eadb40d0d7111882c9b54db4027eb943 440 PIRSF PIRSF000412 15 438 6.6E-166 T 15-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D934_08035 eda174c78d8a0e7486bc8ab2960a7593 456 SUPERFAMILY SSF58113 36 186 9.15E-6 T 15-10-2018 D934_08035 eda174c78d8a0e7486bc8ab2960a7593 456 Gene3D G3DSA:1.20.120.20 44 200 2.3E-6 T 15-10-2018 D934_08035 eda174c78d8a0e7486bc8ab2960a7593 456 Pfam PF02646 RmuC family 144 434 1.4E-74 T 15-10-2018 IPR003798 DNA recombination RmuC D934_02430 6a64eccde0b3e7cd7059717546449edb 636 Pfam PF00183 Hsp90 protein 220 631 1.1E-130 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 D934_02430 6a64eccde0b3e7cd7059717546449edb 636 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 632 31.664 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 D934_02430 6a64eccde0b3e7cd7059717546449edb 636 Gene3D G3DSA:3.40.50.11260 405 491 5.9E-32 T 15-10-2018 D934_02430 6a64eccde0b3e7cd7059717546449edb 636 Gene3D G3DSA:3.30.230.80 237 404 3.2E-68 T 15-10-2018 D934_02430 6a64eccde0b3e7cd7059717546449edb 636 SUPERFAMILY SSF55874 8 217 2.23E-64 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_02430 6a64eccde0b3e7cd7059717546449edb 636 PRINTS PR00775 90kDa heat shock protein signature 78 95 2.1E-57 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal D934_02430 6a64eccde0b3e7cd7059717546449edb 636 PRINTS PR00775 90kDa heat shock protein signature 123 145 2.1E-57 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal D934_02430 6a64eccde0b3e7cd7059717546449edb 636 PRINTS PR00775 90kDa heat shock protein signature 8 28 2.1E-57 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal D934_02430 6a64eccde0b3e7cd7059717546449edb 636 PRINTS PR00775 90kDa heat shock protein signature 193 211 2.1E-57 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal D934_02430 6a64eccde0b3e7cd7059717546449edb 636 PRINTS PR00775 90kDa heat shock protein signature 96 113 2.1E-57 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal D934_02430 6a64eccde0b3e7cd7059717546449edb 636 PRINTS PR00775 90kDa heat shock protein signature 175 192 2.1E-57 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal D934_02430 6a64eccde0b3e7cd7059717546449edb 636 PRINTS PR00775 90kDa heat shock protein signature 29 51 2.1E-57 T 15-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal D934_02430 6a64eccde0b3e7cd7059717546449edb 636 PIRSF PIRSF002583 2 636 1.3E-209 T 15-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 D934_02430 6a64eccde0b3e7cd7059717546449edb 636 SMART SM00387 30 187 8.1E-9 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_02430 6a64eccde0b3e7cd7059717546449edb 636 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 15-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 D934_02430 6a64eccde0b3e7cd7059717546449edb 636 Gene3D G3DSA:1.20.120.790 500 633 2.4E-40 T 15-10-2018 IPR037196 HSP90, C-terminal domain D934_02430 6a64eccde0b3e7cd7059717546449edb 636 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 185 5.1E-12 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_02430 6a64eccde0b3e7cd7059717546449edb 636 SUPERFAMILY SSF110942 520 632 3.66E-33 T 15-10-2018 IPR037196 HSP90, C-terminal domain D934_02430 6a64eccde0b3e7cd7059717546449edb 636 Gene3D G3DSA:3.30.565.10 1 231 1.6E-75 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_02430 6a64eccde0b3e7cd7059717546449edb 636 SUPERFAMILY SSF54211 238 493 2.5E-95 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_02375 4556e09c0dfbb115245766ed41189b10 443 Pfam PF03600 Citrate transporter 13 387 9.7E-55 T 15-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 D934_02375 4556e09c0dfbb115245766ed41189b10 443 TIGRFAM TIGR00784 citMHS: citrate transporter 1 436 1.7E-188 T 15-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 D934_06750 533885cbf98c66afce734d2265314194 101 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 6 95 1.7E-33 T 15-10-2018 IPR014057 Uncharacterized protein HI1420 D934_06750 533885cbf98c66afce734d2265314194 101 Pfam PF01381 Helix-turn-helix 50 93 5.4E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_06750 533885cbf98c66afce734d2265314194 101 SUPERFAMILY SSF47413 36 94 3.66E-11 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_06750 533885cbf98c66afce734d2265314194 101 SMART SM00530 43 96 0.006 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_06750 533885cbf98c66afce734d2265314194 101 Gene3D G3DSA:1.10.260.40 40 100 7.4E-6 T 15-10-2018 D934_08640 533885cbf98c66afce734d2265314194 101 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 6 95 1.7E-33 T 15-10-2018 IPR014057 Uncharacterized protein HI1420 D934_08640 533885cbf98c66afce734d2265314194 101 Pfam PF01381 Helix-turn-helix 50 93 5.4E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_08640 533885cbf98c66afce734d2265314194 101 SUPERFAMILY SSF47413 36 94 3.66E-11 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_08640 533885cbf98c66afce734d2265314194 101 SMART SM00530 43 96 0.006 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_08640 533885cbf98c66afce734d2265314194 101 Gene3D G3DSA:1.10.260.40 40 100 7.4E-6 T 15-10-2018 D934_12325 533885cbf98c66afce734d2265314194 101 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 6 95 1.7E-33 T 15-10-2018 IPR014057 Uncharacterized protein HI1420 D934_12325 533885cbf98c66afce734d2265314194 101 Pfam PF01381 Helix-turn-helix 50 93 5.4E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_12325 533885cbf98c66afce734d2265314194 101 SUPERFAMILY SSF47413 36 94 3.66E-11 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_12325 533885cbf98c66afce734d2265314194 101 SMART SM00530 43 96 0.006 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_12325 533885cbf98c66afce734d2265314194 101 Gene3D G3DSA:1.10.260.40 40 100 7.4E-6 T 15-10-2018 D934_01960 0ae750b8cbdf2d85c913197b7ae13f54 199 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 159 21.023 T 15-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 D934_01960 0ae750b8cbdf2d85c913197b7ae13f54 199 Pfam PF02576 RimP N-terminal domain 11 89 1.3E-24 T 15-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal D934_01960 0ae750b8cbdf2d85c913197b7ae13f54 199 Pfam PF17384 RimP C-terminal SH3 domain 92 159 1.8E-18 T 15-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal D934_01960 0ae750b8cbdf2d85c913197b7ae13f54 199 SUPERFAMILY SSF74942 90 159 1.83E-10 T 15-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily D934_01960 0ae750b8cbdf2d85c913197b7ae13f54 199 Gene3D G3DSA:3.30.300.70 4 86 2.4E-16 T 15-10-2018 IPR035956 RimP, N-terminal domain superfamily D934_01960 0ae750b8cbdf2d85c913197b7ae13f54 199 SUPERFAMILY SSF75420 7 89 2.22E-18 T 15-10-2018 IPR035956 RimP, N-terminal domain superfamily D934_08815 4b51df559f00a6a7f01fcfa0e6a188bf 637 Gene3D G3DSA:3.30.1370.120 294 373 8.2E-9 T 15-10-2018 IPR038591 NolW-like superfamily D934_08815 4b51df559f00a6a7f01fcfa0e6a188bf 637 Gene3D G3DSA:2.60.40.3470 44 169 3.1E-32 T 15-10-2018 D934_08815 4b51df559f00a6a7f01fcfa0e6a188bf 637 Pfam PF07660 Secretin and TonB N terminus short domain 222 268 1.8E-8 T 15-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 D934_08815 4b51df559f00a6a7f01fcfa0e6a188bf 637 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 573 606 - T 15-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 D934_08815 4b51df559f00a6a7f01fcfa0e6a188bf 637 SMART SM00965 221 269 2.5E-10 T 15-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 D934_08815 4b51df559f00a6a7f01fcfa0e6a188bf 637 Pfam PF03958 Bacterial type II/III secretion system short domain 296 374 3.0E-12 T 15-10-2018 IPR005644 NolW-like D934_08815 4b51df559f00a6a7f01fcfa0e6a188bf 637 PRINTS PR00811 Bacterial general secretion pathway protein D signature 459 483 5.2E-18 T 15-10-2018 IPR001775 GspD/PilQ family D934_08815 4b51df559f00a6a7f01fcfa0e6a188bf 637 PRINTS PR00811 Bacterial general secretion pathway protein D signature 592 610 5.2E-18 T 15-10-2018 IPR001775 GspD/PilQ family D934_08815 4b51df559f00a6a7f01fcfa0e6a188bf 637 PRINTS PR00811 Bacterial general secretion pathway protein D signature 374 384 5.2E-18 T 15-10-2018 IPR001775 GspD/PilQ family D934_08815 4b51df559f00a6a7f01fcfa0e6a188bf 637 PRINTS PR00811 Bacterial general secretion pathway protein D signature 615 629 5.2E-18 T 15-10-2018 IPR001775 GspD/PilQ family D934_08815 4b51df559f00a6a7f01fcfa0e6a188bf 637 Pfam PF00263 Bacterial type II and III secretion system protein 463 628 2.5E-48 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 D934_08815 4b51df559f00a6a7f01fcfa0e6a188bf 637 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 196 627 7.1E-156 T 15-10-2018 IPR013355 Type IV pilus secretin PilQ D934_08815 4b51df559f00a6a7f01fcfa0e6a188bf 637 Gene3D G3DSA:3.55.50.30 178 292 6.3E-40 T 15-10-2018 D934_02710 a4b4b7a22ca9b76afb99330610d8c3a1 338 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 89 8.1E-21 T 15-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 D934_02710 a4b4b7a22ca9b76afb99330610d8c3a1 338 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 9.0E-132 T 15-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 D934_02710 a4b4b7a22ca9b76afb99330610d8c3a1 338 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 199 215 0.0026 T 15-10-2018 IPR001451 Hexapeptide repeat D934_02710 a4b4b7a22ca9b76afb99330610d8c3a1 338 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 140 180 2.2E-5 T 15-10-2018 IPR001451 Hexapeptide repeat D934_02710 a4b4b7a22ca9b76afb99330610d8c3a1 338 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 257 1.9E-6 T 15-10-2018 IPR001451 Hexapeptide repeat D934_02710 a4b4b7a22ca9b76afb99330610d8c3a1 338 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 260 285 0.089 T 15-10-2018 IPR001451 Hexapeptide repeat D934_02710 a4b4b7a22ca9b76afb99330610d8c3a1 338 Gene3D G3DSA:2.160.10.10 98 309 2.8E-60 T 15-10-2018 D934_02710 a4b4b7a22ca9b76afb99330610d8c3a1 338 Gene3D G3DSA:3.40.1390.10 3 97 2.2E-28 T 15-10-2018 D934_02710 a4b4b7a22ca9b76afb99330610d8c3a1 338 SUPERFAMILY SSF51161 33 318 3.3E-76 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily D934_02710 a4b4b7a22ca9b76afb99330610d8c3a1 338 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 35.066 T 15-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 D934_02340 3ef8fce655ff5585838864138de9b12c 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D934_02340 3ef8fce655ff5585838864138de9b12c 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D934_02340 3ef8fce655ff5585838864138de9b12c 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 137 8.1E-44 T 15-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02340 3ef8fce655ff5585838864138de9b12c 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 5.7E-12 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D934_02340 3ef8fce655ff5585838864138de9b12c 162 SUPERFAMILY SSF54862 36 144 7.95E-25 T 15-10-2018 D934_02340 3ef8fce655ff5585838864138de9b12c 162 Gene3D G3DSA:3.30.70.3270 36 161 6.3E-35 T 15-10-2018 D934_02340 3ef8fce655ff5585838864138de9b12c 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 26.648 T 15-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02885 e9b5658105d1c4b5336530a4b0287a7c 582 SMART SM00382 365 552 4.7E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_02885 e9b5658105d1c4b5336530a4b0287a7c 582 SUPERFAMILY SSF90123 11 324 1.44E-65 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D934_02885 e9b5658105d1c4b5336530a4b0287a7c 582 Pfam PF00664 ABC transporter transmembrane region 32 290 2.7E-36 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D934_02885 e9b5658105d1c4b5336530a4b0287a7c 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 9 579 1.0E-260 T 15-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 D934_02885 e9b5658105d1c4b5336530a4b0287a7c 582 Pfam PF00005 ABC transporter 356 506 1.4E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_02885 e9b5658105d1c4b5336530a4b0287a7c 582 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_02885 e9b5658105d1c4b5336530a4b0287a7c 582 Gene3D G3DSA:1.20.1560.10 1 327 6.5E-69 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D934_02885 e9b5658105d1c4b5336530a4b0287a7c 582 Gene3D G3DSA:3.40.50.300 328 578 2.0E-88 T 15-10-2018 D934_02885 e9b5658105d1c4b5336530a4b0287a7c 582 SUPERFAMILY SSF52540 331 577 1.3E-86 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_01715 013c8833f3cf9a66156df977c73f3da4 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 D934_01715 013c8833f3cf9a66156df977c73f3da4 260 Pfam PF01026 TatD related DNase 6 253 3.7E-68 T 15-10-2018 IPR001130 TatD family GO:0016788 D934_01715 013c8833f3cf9a66156df977c73f3da4 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 D934_01715 013c8833f3cf9a66156df977c73f3da4 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 127 137 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 D934_01715 013c8833f3cf9a66156df977c73f3da4 260 Gene3D G3DSA:3.20.20.140 2 256 7.2E-78 T 15-10-2018 D934_01715 013c8833f3cf9a66156df977c73f3da4 260 PIRSF PIRSF005902 1 258 8.9E-71 T 15-10-2018 IPR001130 TatD family GO:0016788 D934_01715 013c8833f3cf9a66156df977c73f3da4 260 SUPERFAMILY SSF51556 5 255 1.49E-78 T 15-10-2018 IPR032466 Metal-dependent hydrolase D934_03285 b9ebe9f273bc76e34729f62b5e5fa544 287 Gene3D G3DSA:3.40.1380.10 61 206 1.9E-105 T 15-10-2018 D934_03285 b9ebe9f273bc76e34729f62b5e5fa544 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 15-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03285 b9ebe9f273bc76e34729f62b5e5fa544 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 1.3E-104 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03285 b9ebe9f273bc76e34729f62b5e5fa544 287 Pfam PF00231 ATP synthase 5 286 1.0E-93 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03285 b9ebe9f273bc76e34729f62b5e5fa544 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 35.742 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03285 b9ebe9f273bc76e34729f62b5e5fa544 287 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 4.2E-37 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03285 b9ebe9f273bc76e34729f62b5e5fa544 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 4.2E-37 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03285 b9ebe9f273bc76e34729f62b5e5fa544 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 4.2E-37 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03285 b9ebe9f273bc76e34729f62b5e5fa544 287 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 4.2E-37 T 15-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03285 b9ebe9f273bc76e34729f62b5e5fa544 287 SUPERFAMILY SSF52943 2 287 1.12E-91 T 15-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03285 b9ebe9f273bc76e34729f62b5e5fa544 287 Gene3D G3DSA:1.10.287.80 6 283 1.9E-105 T 15-10-2018 D934_08740 26ece3fd0a9d2e469dd45fd97cfb3e14 718 Pfam PF00271 Helicase conserved C-terminal domain 534 613 1.6E-16 T 15-10-2018 IPR001650 Helicase, C-terminal D934_08740 26ece3fd0a9d2e469dd45fd97cfb3e14 718 SMART SM00487 276 470 8.0E-27 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_08740 26ece3fd0a9d2e469dd45fd97cfb3e14 718 Pfam PF17191 RecG wedge domain 24 181 1.4E-11 T 15-10-2018 IPR033454 RecG, wedge domain D934_08740 26ece3fd0a9d2e469dd45fd97cfb3e14 718 Gene3D G3DSA:3.40.50.300 220 461 9.5E-76 T 15-10-2018 D934_08740 26ece3fd0a9d2e469dd45fd97cfb3e14 718 SUPERFAMILY SSF52540 192 464 2.0E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08740 26ece3fd0a9d2e469dd45fd97cfb3e14 718 Gene3D G3DSA:2.40.50.140 55 148 1.4E-7 T 15-10-2018 D934_08740 26ece3fd0a9d2e469dd45fd97cfb3e14 718 SUPERFAMILY SSF52540 303 678 1.36E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08740 26ece3fd0a9d2e469dd45fd97cfb3e14 718 Gene3D G3DSA:3.40.50.300 468 655 2.9E-53 T 15-10-2018 D934_08740 26ece3fd0a9d2e469dd45fd97cfb3e14 718 Pfam PF00270 DEAD/DEAH box helicase 283 416 8.7E-15 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D934_08740 26ece3fd0a9d2e469dd45fd97cfb3e14 718 SUPERFAMILY SSF50249 16 183 1.42E-26 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_08740 26ece3fd0a9d2e469dd45fd97cfb3e14 718 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 37 686 4.5E-209 T 15-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 D934_08740 26ece3fd0a9d2e469dd45fd97cfb3e14 718 SMART SM00490 530 614 1.4E-22 T 15-10-2018 IPR001650 Helicase, C-terminal D934_01390 2ba84f719ff01e945d901cbb2a358d16 300 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 157 191 3.6E-4 T 15-10-2018 IPR001451 Hexapeptide repeat D934_01390 2ba84f719ff01e945d901cbb2a358d16 300 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 200 234 6.6E-11 T 15-10-2018 IPR001451 Hexapeptide repeat D934_01390 2ba84f719ff01e945d901cbb2a358d16 300 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 28 297 4.6E-123 T 15-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 D934_01390 2ba84f719ff01e945d901cbb2a358d16 300 SUPERFAMILY SSF51161 28 281 6.79E-66 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily D934_01390 2ba84f719ff01e945d901cbb2a358d16 300 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 28 94 9.6E-22 T 15-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 D934_01390 2ba84f719ff01e945d901cbb2a358d16 300 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 25 297 53.8 T 15-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 D934_01390 2ba84f719ff01e945d901cbb2a358d16 300 Gene3D G3DSA:2.160.10.10 112 282 3.2E-54 T 15-10-2018 D934_01390 2ba84f719ff01e945d901cbb2a358d16 300 Gene3D G3DSA:1.10.166.10 26 95 5.5E-21 T 15-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 D934_00365 d1eb78188d2a8fd33251d5f4221d4b41 104 Pfam PF00462 Glutaredoxin 17 81 2.1E-15 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 D934_00365 d1eb78188d2a8fd33251d5f4221d4b41 104 PIRSF PIRSF005894 1 104 5.7E-45 T 15-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 D934_00365 d1eb78188d2a8fd33251d5f4221d4b41 104 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 8.4E-40 T 15-10-2018 IPR004480 Monothiol glutaredoxin-related D934_00365 d1eb78188d2a8fd33251d5f4221d4b41 104 SUPERFAMILY SSF52833 3 103 1.22E-28 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_00365 d1eb78188d2a8fd33251d5f4221d4b41 104 Gene3D G3DSA:3.40.30.10 6 102 1.1E-27 T 15-10-2018 D934_05900 9f2b07a484326c0a08223e040c541ccb 155 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 14 145 1.0E-27 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 D934_05900 9f2b07a484326c0a08223e040c541ccb 155 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 11 149 20.521 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 D934_05900 9f2b07a484326c0a08223e040c541ccb 155 Pfam PF03652 Holliday junction resolvase 12 146 2.7E-34 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 D934_05900 9f2b07a484326c0a08223e040c541ccb 155 SMART SM00732 11 111 2.0E-29 T 15-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 D934_05900 9f2b07a484326c0a08223e040c541ccb 155 SUPERFAMILY SSF53098 11 146 1.37E-30 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_05900 9f2b07a484326c0a08223e040c541ccb 155 Gene3D G3DSA:3.30.420.140 10 147 2.0E-33 T 15-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 D934_10565 a7e702eb863c52a3117b13e461604d55 660 SUPERFAMILY SSF50447 269 356 3.53E-21 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D934_10565 a7e702eb863c52a3117b13e461604d55 660 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 45 488 51.558 T 15-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D934_10565 a7e702eb863c52a3117b13e461604d55 660 SUPERFAMILY SSF50465 357 458 1.94E-30 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal D934_10565 a7e702eb863c52a3117b13e461604d55 660 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 109 124 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site D934_10565 a7e702eb863c52a3117b13e461604d55 660 Gene3D G3DSA:3.40.50.300 465 659 1.3E-72 T 15-10-2018 D934_10565 a7e702eb863c52a3117b13e461604d55 660 Gene3D G3DSA:2.40.30.10 356 459 2.4E-32 T 15-10-2018 D934_10565 a7e702eb863c52a3117b13e461604d55 660 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 54 458 7.1E-192 T 15-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D934_10565 a7e702eb863c52a3117b13e461604d55 660 PRINTS PR00315 GTP-binding elongation factor signature 55 68 1.0E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_10565 a7e702eb863c52a3117b13e461604d55 660 PRINTS PR00315 GTP-binding elongation factor signature 152 163 1.0E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_10565 a7e702eb863c52a3117b13e461604d55 660 PRINTS PR00315 GTP-binding elongation factor signature 116 124 1.0E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_10565 a7e702eb863c52a3117b13e461604d55 660 PRINTS PR00315 GTP-binding elongation factor signature 136 146 1.0E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_10565 a7e702eb863c52a3117b13e461604d55 660 PRINTS PR00315 GTP-binding elongation factor signature 189 198 1.0E-13 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_10565 a7e702eb863c52a3117b13e461604d55 660 Gene3D G3DSA:3.40.50.300 31 264 5.4E-68 T 15-10-2018 D934_10565 a7e702eb863c52a3117b13e461604d55 660 SUPERFAMILY SSF52540 485 655 1.31E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_10565 a7e702eb863c52a3117b13e461604d55 660 Pfam PF01583 Adenylylsulphate kinase 489 641 6.4E-68 T 15-10-2018 D934_10565 a7e702eb863c52a3117b13e461604d55 660 SUPERFAMILY SSF52540 45 260 1.24E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_10565 a7e702eb863c52a3117b13e461604d55 660 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 476 654 3.7E-72 T 15-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 D934_10565 a7e702eb863c52a3117b13e461604d55 660 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 487 659 36.877 T 15-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 D934_10565 a7e702eb863c52a3117b13e461604d55 660 Pfam PF00009 Elongation factor Tu GTP binding domain 53 252 2.8E-40 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_10565 a7e702eb863c52a3117b13e461604d55 660 Gene3D G3DSA:2.40.30.10 268 354 2.0E-22 T 15-10-2018 D934_00370 190f38f398919537d2f4d76805da0d62 394 SUPERFAMILY SSF56059 98 299 9.37E-60 T 15-10-2018 D934_00370 190f38f398919537d2f4d76805da0d62 394 Pfam PF02222 ATP-grasp domain 107 279 1.8E-53 T 15-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type D934_00370 190f38f398919537d2f4d76805da0d62 394 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 351 39.744 T 15-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 D934_00370 190f38f398919537d2f4d76805da0d62 394 SUPERFAMILY SSF51246 304 368 2.35E-15 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 D934_00370 190f38f398919537d2f4d76805da0d62 394 Gene3D G3DSA:3.30.1490.20 103 180 5.1E-27 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D934_00370 190f38f398919537d2f4d76805da0d62 394 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 354 2.1E-109 T 15-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 D934_00370 190f38f398919537d2f4d76805da0d62 394 SUPERFAMILY SSF52440 3 95 1.19E-19 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D934_00370 190f38f398919537d2f4d76805da0d62 394 Gene3D G3DSA:3.30.470.20 181 372 3.9E-66 T 15-10-2018 D934_00370 190f38f398919537d2f4d76805da0d62 394 Gene3D G3DSA:3.40.50.20 1 102 4.2E-31 T 15-10-2018 D934_13395 26966a6b955e85953f870743a537066d 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 8.3E-16 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_13395 26966a6b955e85953f870743a537066d 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 8.3E-16 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_13395 26966a6b955e85953f870743a537066d 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 8.3E-16 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_13395 26966a6b955e85953f870743a537066d 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 4.2E-44 T 15-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 D934_13395 26966a6b955e85953f870743a537066d 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 29.511 T 15-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 D934_13395 26966a6b955e85953f870743a537066d 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 4.5E-31 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_13395 26966a6b955e85953f870743a537066d 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 D934_13395 26966a6b955e85953f870743a537066d 99 SMART SM00411 3 92 2.7E-41 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_13395 26966a6b955e85953f870743a537066d 99 Gene3D G3DSA:4.10.520.10 1 96 6.0E-36 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D934_13395 26966a6b955e85953f870743a537066d 99 SUPERFAMILY SSF47729 3 92 5.45E-32 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D934_12990 909ed3323271f190b2ca954371f17e8c 882 SMART SM01217 792 860 1.1E-22 T 15-10-2018 IPR026891 Fibronectin type III-like domain D934_12990 909ed3323271f190b2ca954371f17e8c 882 SUPERFAMILY SSF52279 369 758 4.45E-52 T 15-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 D934_12990 909ed3323271f190b2ca954371f17e8c 882 SMART SM00758 452 606 2.1E-36 T 15-10-2018 IPR011658 PA14 domain D934_12990 909ed3323271f190b2ca954371f17e8c 882 Pfam PF14310 Fibronectin type III-like domain 792 858 3.4E-18 T 15-10-2018 IPR026891 Fibronectin type III-like domain D934_12990 909ed3323271f190b2ca954371f17e8c 882 Gene3D G3DSA:2.60.40.10 758 865 4.3E-28 T 15-10-2018 IPR013783 Immunoglobulin-like fold D934_12990 909ed3323271f190b2ca954371f17e8c 882 Gene3D G3DSA:3.40.50.1700 539 757 1.8E-57 T 15-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 D934_12990 909ed3323271f190b2ca954371f17e8c 882 Gene3D G3DSA:3.40.50.1700 354 457 1.3E-17 T 15-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 D934_12990 909ed3323271f190b2ca954371f17e8c 882 Pfam PF07691 PA14 domain 452 605 3.4E-44 T 15-10-2018 IPR011658 PA14 domain D934_12990 909ed3323271f190b2ca954371f17e8c 882 SUPERFAMILY SSF51445 27 368 5.69E-95 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily D934_12990 909ed3323271f190b2ca954371f17e8c 882 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 42 327 5.3E-49 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D934_12990 909ed3323271f190b2ca954371f17e8c 882 PRINTS PR00133 Glycosyl hydrolase family 3 signature 180 196 8.9E-12 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D934_12990 909ed3323271f190b2ca954371f17e8c 882 PRINTS PR00133 Glycosyl hydrolase family 3 signature 84 103 8.9E-12 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D934_12990 909ed3323271f190b2ca954371f17e8c 882 PRINTS PR00133 Glycosyl hydrolase family 3 signature 251 269 8.9E-12 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D934_12990 909ed3323271f190b2ca954371f17e8c 882 Gene3D G3DSA:3.20.20.300 28 346 5.8E-96 T 15-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 D934_12990 909ed3323271f190b2ca954371f17e8c 882 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 369 755 3.6E-61 T 15-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 D934_12990 909ed3323271f190b2ca954371f17e8c 882 SUPERFAMILY SSF56988 455 633 3.53E-25 T 15-10-2018 D934_06825 b06c03f29a8250a760bdd2c86cbf67db 338 Pfam PF00294 pfkB family carbohydrate kinase 13 325 7.6E-59 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB D934_06825 b06c03f29a8250a760bdd2c86cbf67db 338 Gene3D G3DSA:3.40.1190.20 9 338 3.5E-135 T 15-10-2018 IPR029056 Ribokinase-like D934_06825 b06c03f29a8250a760bdd2c86cbf67db 338 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 44 68 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 D934_06825 b06c03f29a8250a760bdd2c86cbf67db 338 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 264 277 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 D934_06825 b06c03f29a8250a760bdd2c86cbf67db 338 SUPERFAMILY SSF53613 12 334 6.24E-75 T 15-10-2018 IPR029056 Ribokinase-like D934_04120 56705c0768ffbf5deddca26d213d532e 234 Gene3D G3DSA:2.40.128.110 24 193 3.1E-40 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D934_04120 56705c0768ffbf5deddca26d213d532e 234 SMART SM00867 25 190 1.6E-48 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D934_04120 56705c0768ffbf5deddca26d213d532e 234 SUPERFAMILY SSF101874 24 192 3.4E-44 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D934_04120 56705c0768ffbf5deddca26d213d532e 234 Pfam PF04264 YceI-like domain 26 189 7.3E-33 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D934_09925 ced96c4b7b6dd482627077ff6be4fe9c 362 PIRSF PIRSF006468 3 362 3.7E-129 T 15-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 D934_09925 ced96c4b7b6dd482627077ff6be4fe9c 362 Gene3D G3DSA:3.20.10.10 174 343 3.7E-129 T 15-10-2018 D934_09925 ced96c4b7b6dd482627077ff6be4fe9c 362 ProSitePatterns PS00770 Aminotransferases class-IV signature. 236 266 - T 15-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 D934_09925 ced96c4b7b6dd482627077ff6be4fe9c 362 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 47 358 1.7E-145 T 15-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 D934_09925 ced96c4b7b6dd482627077ff6be4fe9c 362 Pfam PF01063 Amino-transferase class IV 73 316 3.3E-33 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 D934_09925 ced96c4b7b6dd482627077ff6be4fe9c 362 Gene3D G3DSA:3.30.470.10 28 356 3.7E-129 T 15-10-2018 D934_09925 ced96c4b7b6dd482627077ff6be4fe9c 362 SUPERFAMILY SSF56752 4 357 2.62E-109 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 D934_02045 758da930240f3e9bac5c692370517ec1 316 SMART SM00893 4 187 4.4E-29 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 D934_02045 758da930240f3e9bac5c692370517ec1 316 SUPERFAMILY SSF52467 194 310 1.59E-46 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily D934_02045 758da930240f3e9bac5c692370517ec1 316 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 195 277 1.1E-35 T 15-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 D934_02045 758da930240f3e9bac5c692370517ec1 316 Pfam PF01012 Electron transfer flavoprotein domain 5 174 3.0E-31 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 D934_02045 758da930240f3e9bac5c692370517ec1 316 PIRSF PIRSF000089 1 316 2.6E-107 T 15-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 D934_02045 758da930240f3e9bac5c692370517ec1 316 Gene3D G3DSA:3.40.50.620 4 187 1.6E-40 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_02045 758da930240f3e9bac5c692370517ec1 316 Gene3D G3DSA:3.40.50.1220 190 316 4.4E-54 T 15-10-2018 D934_02045 758da930240f3e9bac5c692370517ec1 316 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 258 284 - T 15-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 D934_02045 758da930240f3e9bac5c692370517ec1 316 SUPERFAMILY SSF52402 4 184 9.07E-40 T 15-10-2018 D934_02880 b1daf2bcaa3d32c9ac2062c8c80b329f 153 Gene3D G3DSA:3.30.420.270 69 140 1.7E-11 T 15-10-2018 D934_02880 b1daf2bcaa3d32c9ac2062c8c80b329f 153 Pfam PF02472 Biopolymer transport protein ExbD/TolR 18 144 1.2E-30 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 D934_10920 6b4c1816fda58d3702dad041555b4d09 330 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 38 312 4.6E-73 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 D934_10920 6b4c1816fda58d3702dad041555b4d09 330 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 168 180 - T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 D934_10920 6b4c1816fda58d3702dad041555b4d09 330 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 34 314 3.2E-74 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 D934_10920 6b4c1816fda58d3702dad041555b4d09 330 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 35 318 19.582 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 D934_02845 60162330b4c000e06c104f0455f24217 261 SUPERFAMILY SSF46548 131 258 2.44E-40 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D934_02845 60162330b4c000e06c104f0455f24217 261 Pfam PF13534 4Fe-4S dicluster domain 171 244 6.7E-10 T 15-10-2018 D934_02845 60162330b4c000e06c104f0455f24217 261 SUPERFAMILY SSF54292 28 129 7.27E-30 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D934_02845 60162330b4c000e06c104f0455f24217 261 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 253 1.8E-83 T 15-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02845 60162330b4c000e06c104f0455f24217 261 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D934_02845 60162330b4c000e06c104f0455f24217 261 Gene3D G3DSA:1.10.1060.10 130 261 6.3E-59 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D934_02845 60162330b4c000e06c104f0455f24217 261 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 D934_02845 60162330b4c000e06c104f0455f24217 261 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 134 9.7E-34 T 15-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02845 60162330b4c000e06c104f0455f24217 261 Gene3D G3DSA:3.10.20.30 19 129 1.6E-44 T 15-10-2018 IPR012675 Beta-grasp domain superfamily D934_02505 c92174e755c00ee484ef57476dbb42f0 467 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 465 36.479 T 15-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 D934_02505 c92174e755c00ee484ef57476dbb42f0 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.5E-28 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 D934_02505 c92174e755c00ee484ef57476dbb42f0 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 1.5E-28 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 D934_02505 c92174e755c00ee484ef57476dbb42f0 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.5E-28 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 D934_02505 c92174e755c00ee484ef57476dbb42f0 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 1.5E-28 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 D934_02505 c92174e755c00ee484ef57476dbb42f0 467 Pfam PF09190 DALR domain 340 408 5.9E-14 T 15-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 D934_02505 c92174e755c00ee484ef57476dbb42f0 467 Gene3D G3DSA:3.40.50.620 1 306 7.7E-121 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_02505 c92174e755c00ee484ef57476dbb42f0 467 SUPERFAMILY SSF52374 4 314 7.24E-87 T 15-10-2018 D934_02505 c92174e755c00ee484ef57476dbb42f0 467 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 19 313 1.3E-111 T 15-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 D934_02505 c92174e755c00ee484ef57476dbb42f0 467 Gene3D G3DSA:1.20.120.640 307 465 1.7E-34 T 15-10-2018 D934_02505 c92174e755c00ee484ef57476dbb42f0 467 SMART SM00840 339 408 3.0E-13 T 15-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 D934_02505 c92174e755c00ee484ef57476dbb42f0 467 SUPERFAMILY SSF47323 317 464 1.09E-29 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_02505 c92174e755c00ee484ef57476dbb42f0 467 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 464 2.0E-147 T 15-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 D934_00290 caa6ae421502b95673e239d51f5ad379 559 SUPERFAMILY SSF48452 379 549 9.48E-26 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_00290 caa6ae421502b95673e239d51f5ad379 559 Gene3D G3DSA:1.25.40.10 373 554 1.8E-25 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_00290 caa6ae421502b95673e239d51f5ad379 559 SUPERFAMILY SSF48452 205 363 9.3E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_00290 caa6ae421502b95673e239d51f5ad379 559 SMART SM00028 412 445 2.8 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_00290 caa6ae421502b95673e239d51f5ad379 559 SMART SM00028 378 411 230.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_00290 caa6ae421502b95673e239d51f5ad379 559 SMART SM00028 446 480 320.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_00290 caa6ae421502b95673e239d51f5ad379 559 SMART SM00028 514 547 2.1 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_11950 cd8389f4c6dd95df3d5cfeae3bdeba32 222 Pfam PF00551 Formyl transferase 9 185 3.5E-48 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D934_11950 cd8389f4c6dd95df3d5cfeae3bdeba32 222 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 9 196 2.0E-59 T 15-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 D934_11950 cd8389f4c6dd95df3d5cfeae3bdeba32 222 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 9 192 26.099 T 15-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 D934_11950 cd8389f4c6dd95df3d5cfeae3bdeba32 222 Gene3D G3DSA:3.40.50.170 1 207 1.0E-67 T 15-10-2018 D934_11950 cd8389f4c6dd95df3d5cfeae3bdeba32 222 SUPERFAMILY SSF53328 8 199 2.62E-56 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D934_01710 35c789bd07c708a76b3eafc62a4500e9 383 SUPERFAMILY SSF53448 52 306 1.31E-33 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_01710 35c789bd07c708a76b3eafc62a4500e9 383 Gene3D G3DSA:3.90.550.10 42 255 7.5E-28 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_01710 35c789bd07c708a76b3eafc62a4500e9 383 Pfam PF00535 Glycosyl transferase family 2 53 215 5.3E-24 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D934_11925 e7a812c6e22c1c54e4dbf9b16e26061e 240 Pfam PF00483 Nucleotidyl transferase 2 118 1.0E-10 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 D934_11925 e7a812c6e22c1c54e4dbf9b16e26061e 240 Gene3D G3DSA:3.90.550.10 1 236 2.7E-47 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_11925 e7a812c6e22c1c54e4dbf9b16e26061e 240 SUPERFAMILY SSF53448 1 233 1.19E-46 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_04345 4c7904ef71365a031110c058e6e8995d 472 PRINTS PR01874 DNA repair protein radA signature 191 215 3.0E-91 T 15-10-2018 D934_04345 4c7904ef71365a031110c058e6e8995d 472 PRINTS PR01874 DNA repair protein radA signature 100 128 3.0E-91 T 15-10-2018 D934_04345 4c7904ef71365a031110c058e6e8995d 472 PRINTS PR01874 DNA repair protein radA signature 265 291 3.0E-91 T 15-10-2018 D934_04345 4c7904ef71365a031110c058e6e8995d 472 PRINTS PR01874 DNA repair protein radA signature 339 362 3.0E-91 T 15-10-2018 D934_04345 4c7904ef71365a031110c058e6e8995d 472 PRINTS PR01874 DNA repair protein radA signature 24 48 3.0E-91 T 15-10-2018 D934_04345 4c7904ef71365a031110c058e6e8995d 472 PRINTS PR01874 DNA repair protein radA signature 230 258 3.0E-91 T 15-10-2018 D934_04345 4c7904ef71365a031110c058e6e8995d 472 PRINTS PR01874 DNA repair protein radA signature 141 158 3.0E-91 T 15-10-2018 D934_04345 4c7904ef71365a031110c058e6e8995d 472 Pfam PF13481 AAA domain 101 239 3.9E-12 T 15-10-2018 D934_04345 4c7904ef71365a031110c058e6e8995d 472 SUPERFAMILY SSF54211 272 470 6.07E-39 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_04345 4c7904ef71365a031110c058e6e8995d 472 Pfam PF13541 Subunit ChlI of Mg-chelatase 368 447 3.5E-8 T 15-10-2018 D934_04345 4c7904ef71365a031110c058e6e8995d 472 SUPERFAMILY SSF52540 86 308 3.71E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04345 4c7904ef71365a031110c058e6e8995d 472 Hamap MF_01498 DNA repair protein RadA [radA]. 35 472 42.812 T 15-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 D934_04345 4c7904ef71365a031110c058e6e8995d 472 Gene3D G3DSA:3.40.50.300 79 303 7.3E-40 T 15-10-2018 D934_04345 4c7904ef71365a031110c058e6e8995d 472 Gene3D G3DSA:3.30.230.10 325 472 3.1E-16 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D934_04345 4c7904ef71365a031110c058e6e8995d 472 SMART SM00382 108 261 9.5E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_04345 4c7904ef71365a031110c058e6e8995d 472 TIGRFAM TIGR00416 sms: DNA repair protein RadA 16 468 6.9E-186 T 15-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 Gene3D G3DSA:3.30.950.10 336 469 9.1E-43 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 Gene3D G3DSA:3.40.50.720 5 115 8.9E-28 T 15-10-2018 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 220 455 1.1E-89 T 15-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 Pfam PF10414 Sirohaem synthase dimerisation region 154 211 6.9E-14 T 15-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 222 432 5.2E-49 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 Gene3D G3DSA:3.40.1010.10 219 335 7.8E-44 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 Pfam PF14824 Sirohaem biosynthesis protein central 123 149 3.8E-7 T 15-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 SUPERFAMILY SSF75615 118 215 2.49E-23 T 15-10-2018 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 7 211 1.4E-83 T 15-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 SUPERFAMILY SSF53790 216 464 2.22E-76 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 Pfam PF13241 Putative NAD(P)-binding 9 119 4.3E-22 T 15-10-2018 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 SUPERFAMILY SSF51735 7 115 3.58E-21 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 Hamap MF_01646 Siroheme synthase [cysG]. 4 464 46.787 T 15-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 300 333 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 Gene3D G3DSA:3.30.160.110 117 151 6.4E-14 T 15-10-2018 D934_13045 007c04d036bdfeefbafecb241ef4a88b 476 PIRSF PIRSF036426 4 472 2.5E-198 T 15-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D934_05460 27c983d0d65410e27cb8510d3753b41e 554 Pfam PF12848 ABC transporter 231 307 1.9E-11 T 15-10-2018 IPR032781 ABC-transporter extension domain D934_05460 27c983d0d65410e27cb8510d3753b41e 554 Pfam PF00005 ABC transporter 24 192 3.3E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_05460 27c983d0d65410e27cb8510d3753b41e 554 Gene3D G3DSA:3.40.50.300 2 286 3.5E-82 T 15-10-2018 D934_05460 27c983d0d65410e27cb8510d3753b41e 554 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_05460 27c983d0d65410e27cb8510d3753b41e 554 Gene3D G3DSA:3.40.50.300 287 548 6.2E-73 T 15-10-2018 D934_05460 27c983d0d65410e27cb8510d3753b41e 554 SMART SM00382 32 237 4.4E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_05460 27c983d0d65410e27cb8510d3753b41e 554 SMART SM00382 349 527 6.3E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_05460 27c983d0d65410e27cb8510d3753b41e 554 SUPERFAMILY SSF52540 10 244 1.51E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_05460 27c983d0d65410e27cb8510d3753b41e 554 Pfam PF00005 ABC transporter 341 474 2.0E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_05460 27c983d0d65410e27cb8510d3753b41e 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 5.9E-287 T 15-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 D934_05460 27c983d0d65410e27cb8510d3753b41e 554 SUPERFAMILY SSF52540 303 523 7.24E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 Gene3D G3DSA:1.10.3370.10 9 435 1.3E-146 T 15-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 3.1E-88 T 15-10-2018 D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 408 426 3.1E-88 T 15-10-2018 D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 321 343 3.1E-88 T 15-10-2018 D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 3.1E-88 T 15-10-2018 D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 3.1E-88 T 15-10-2018 D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 274 293 3.1E-88 T 15-10-2018 D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 376 394 3.1E-88 T 15-10-2018 D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 3.1E-88 T 15-10-2018 D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 3.1E-88 T 15-10-2018 D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 434 9.4E-117 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 439 27.011 T 15-10-2018 IPR026593 Protein translocase subunit SecY D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 15-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 Pfam PF00344 SecY translocase 76 422 8.0E-104 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 SUPERFAMILY SSF103491 13 430 4.71E-118 T 15-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D934_03415 fd76a24cbc1d05ebb173b097e048bcdb 457 PIRSF PIRSF004557 11 446 3.4E-111 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D934_00130 5c1c1892c99c4c9b78196031f58654f9 138 SUPERFAMILY SSF52038 39 130 4.05E-22 T 15-10-2018 IPR035905 Barstar-like superfamily D934_00130 5c1c1892c99c4c9b78196031f58654f9 138 Gene3D G3DSA:3.30.370.10 38 131 1.5E-8 T 15-10-2018 IPR035905 Barstar-like superfamily D934_00130 5c1c1892c99c4c9b78196031f58654f9 138 Pfam PF01337 Barstar (barnase inhibitor) 42 125 2.0E-22 T 15-10-2018 IPR000468 Barstar (barnase inhibitor) D934_03865 8031c02aa3c2c24ec0756183334225bd 229 PIRSF PIRSF016262 16 226 4.5E-59 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D934_03865 8031c02aa3c2c24ec0756183334225bd 229 Gene3D G3DSA:3.30.930.10 16 217 6.2E-64 T 15-10-2018 D934_03865 8031c02aa3c2c24ec0756183334225bd 229 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 88 141 2.0E-24 T 15-10-2018 D934_03865 8031c02aa3c2c24ec0756183334225bd 229 Pfam PF03099 Biotin/lipoate A/B protein ligase family 75 172 9.7E-9 T 15-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 D934_03865 8031c02aa3c2c24ec0756183334225bd 229 SUPERFAMILY SSF55681 19 219 1.57E-67 T 15-10-2018 D934_03865 8031c02aa3c2c24ec0756183334225bd 229 Hamap MF_00013 Octanoyltransferase [lipB]. 18 219 38.346 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D934_03865 8031c02aa3c2c24ec0756183334225bd 229 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 84 99 - T 15-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 D934_03865 8031c02aa3c2c24ec0756183334225bd 229 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 40 216 2.3E-63 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D934_02390 2ddb9be753e758f9587e3aec444dbf90 457 Gene3D G3DSA:3.30.565.10 311 457 2.0E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_02390 2ddb9be753e758f9587e3aec444dbf90 457 SUPERFAMILY SSF55874 312 456 2.88E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_02390 2ddb9be753e758f9587e3aec444dbf90 457 Pfam PF08521 Two-component sensor kinase N-terminal 27 166 8.3E-37 T 15-10-2018 IPR013727 Two-component sensor kinase, N-terminal D934_02390 2ddb9be753e758f9587e3aec444dbf90 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 300 1.2E-7 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_02390 2ddb9be753e758f9587e3aec444dbf90 457 SMART SM00388 242 307 5.9E-8 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_02390 2ddb9be753e758f9587e3aec444dbf90 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 455 2.9E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_02390 2ddb9be753e758f9587e3aec444dbf90 457 SUPERFAMILY SSF47384 225 300 9.22E-13 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D934_02390 2ddb9be753e758f9587e3aec444dbf90 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 3.2E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_02390 2ddb9be753e758f9587e3aec444dbf90 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 415 3.2E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_02390 2ddb9be753e758f9587e3aec444dbf90 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 3.2E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_02390 2ddb9be753e758f9587e3aec444dbf90 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 3.2E-11 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_02390 2ddb9be753e758f9587e3aec444dbf90 457 Gene3D G3DSA:1.10.287.130 194 307 5.6E-15 T 15-10-2018 D934_02390 2ddb9be753e758f9587e3aec444dbf90 457 SMART SM00387 352 457 3.2E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_03790 b06e79b3c28de45e7851de57847bf8d1 1641 Pfam PF00207 Alpha-2-macroglobulin family 957 1042 2.0E-8 T 15-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 D934_03790 b06e79b3c28de45e7851de57847bf8d1 1641 Gene3D G3DSA:2.60.40.1930 386 485 7.9E-7 T 15-10-2018 D934_03790 b06e79b3c28de45e7851de57847bf8d1 1641 Gene3D G3DSA:1.50.10.20 1151 1418 9.7E-17 T 15-10-2018 D934_03790 b06e79b3c28de45e7851de57847bf8d1 1641 Pfam PF01835 MG2 domain 386 473 6.4E-20 T 15-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 D934_03790 b06e79b3c28de45e7851de57847bf8d1 1641 SUPERFAMILY SSF48239 1156 1413 2.36E-27 T 15-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid D934_03790 b06e79b3c28de45e7851de57847bf8d1 1641 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 748 890 2.2E-14 T 15-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 D934_03790 b06e79b3c28de45e7851de57847bf8d1 1641 PIRSF PIRSF038980 33 1640 0.0 T 15-10-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria D934_03790 b06e79b3c28de45e7851de57847bf8d1 1641 SMART SM01360 954 1043 6.9E-23 T 15-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 D934_03790 b06e79b3c28de45e7851de57847bf8d1 1641 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 286 380 1.5E-21 T 15-10-2018 D934_03790 b06e79b3c28de45e7851de57847bf8d1 1641 SMART SM01359 747 890 1.4E-33 T 15-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 D934_00395 49abe8501d24a039b963b424a96b0a31 721 Gene3D G3DSA:2.60.40.420 88 243 3.1E-28 T 15-10-2018 IPR008972 Cupredoxin D934_00395 49abe8501d24a039b963b424a96b0a31 721 Pfam PF07731 Multicopper oxidase 581 713 6.1E-14 T 15-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 D934_00395 49abe8501d24a039b963b424a96b0a31 721 Gene3D G3DSA:2.60.40.420 554 721 2.1E-30 T 15-10-2018 IPR008972 Cupredoxin D934_00395 49abe8501d24a039b963b424a96b0a31 721 SUPERFAMILY SSF49503 76 247 4.13E-18 T 15-10-2018 IPR008972 Cupredoxin D934_00395 49abe8501d24a039b963b424a96b0a31 721 ProSitePatterns PS00079 Multicopper oxidases signature 1. 690 710 - T 15-10-2018 IPR033138 Multicopper oxidases, conserved site D934_00395 49abe8501d24a039b963b424a96b0a31 721 ProSitePatterns PS00080 Multicopper oxidases signature 2. 695 706 - T 15-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 D934_00395 49abe8501d24a039b963b424a96b0a31 721 SUPERFAMILY SSF49503 573 711 7.33E-16 T 15-10-2018 IPR008972 Cupredoxin D934_00395 49abe8501d24a039b963b424a96b0a31 721 Pfam PF07732 Multicopper oxidase 114 162 1.5E-4 T 15-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 D934_00395 49abe8501d24a039b963b424a96b0a31 721 Pfam PF07732 Multicopper oxidase 174 246 5.7E-9 T 15-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 D934_00395 49abe8501d24a039b963b424a96b0a31 721 Gene3D G3DSA:2.60.40.420 262 473 3.8E-15 T 15-10-2018 IPR008972 Cupredoxin D934_00395 49abe8501d24a039b963b424a96b0a31 721 SUPERFAMILY SSF49503 312 445 2.17E-9 T 15-10-2018 IPR008972 Cupredoxin D934_02060 0324cc3fbc5d2a9c2c0e9fd4ef81e906 295 Gene3D G3DSA:3.90.550.10 1 294 1.9E-77 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_02060 0324cc3fbc5d2a9c2c0e9fd4ef81e906 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 290 3.6E-155 T 15-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 D934_02060 0324cc3fbc5d2a9c2c0e9fd4ef81e906 295 Pfam PF00483 Nucleotidyl transferase 5 240 2.6E-64 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 D934_02060 0324cc3fbc5d2a9c2c0e9fd4ef81e906 295 SUPERFAMILY SSF53448 4 289 9.24E-85 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_05555 548ed4efa1e0e8c47d6e43bad933b293 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 74 102 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_05555 548ed4efa1e0e8c47d6e43bad933b293 214 Gene3D G3DSA:2.160.10.10 26 98 1.5E-11 T 15-10-2018 D934_05555 548ed4efa1e0e8c47d6e43bad933b293 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 85 117 6.9E-5 T 15-10-2018 IPR001451 Hexapeptide repeat D934_05555 548ed4efa1e0e8c47d6e43bad933b293 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 53 81 3.6E-6 T 15-10-2018 IPR001451 Hexapeptide repeat D934_05555 548ed4efa1e0e8c47d6e43bad933b293 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 144 177 9.1E-6 T 15-10-2018 IPR001451 Hexapeptide repeat D934_05555 548ed4efa1e0e8c47d6e43bad933b293 214 Gene3D G3DSA:2.160.10.10 99 214 4.5E-19 T 15-10-2018 D934_05555 548ed4efa1e0e8c47d6e43bad933b293 214 SUPERFAMILY SSF51161 32 212 1.22E-28 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily D934_05555 548ed4efa1e0e8c47d6e43bad933b293 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_01835 6042357a518e8c5be6e7dec22ba2bff3 308 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 304 26.854 T 15-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D934_01835 6042357a518e8c5be6e7dec22ba2bff3 308 Gene3D G3DSA:3.30.200.20 3 115 5.2E-28 T 15-10-2018 D934_01835 6042357a518e8c5be6e7dec22ba2bff3 308 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 19 303 1.3E-72 T 15-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 D934_01835 6042357a518e8c5be6e7dec22ba2bff3 308 Gene3D G3DSA:3.30.470.20 117 260 3.2E-58 T 15-10-2018 D934_01835 6042357a518e8c5be6e7dec22ba2bff3 308 SUPERFAMILY SSF56104 5 305 1.73E-96 T 15-10-2018 D934_01835 6042357a518e8c5be6e7dec22ba2bff3 308 ProSitePatterns PS01058 SAICAR synthetase signature 2. 216 224 - T 15-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D934_01835 6042357a518e8c5be6e7dec22ba2bff3 308 ProSitePatterns PS01057 SAICAR synthetase signature 1. 117 131 - T 15-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D934_01835 6042357a518e8c5be6e7dec22ba2bff3 308 Pfam PF01259 SAICAR synthetase 18 279 1.2E-95 T 15-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D934_05925 921112841b912fe85cd2b87b969166d9 293 SUPERFAMILY SSF49493 131 202 1.44E-10 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 D934_05925 921112841b912fe85cd2b87b969166d9 293 SUPERFAMILY SSF46565 1 105 5.1E-31 T 15-10-2018 IPR036869 Chaperone J-domain superfamily D934_05925 921112841b912fe85cd2b87b969166d9 293 PRINTS PR00625 DnaJ domain signature 61 80 5.6E-22 T 15-10-2018 IPR001623 DnaJ domain D934_05925 921112841b912fe85cd2b87b969166d9 293 PRINTS PR00625 DnaJ domain signature 7 25 5.6E-22 T 15-10-2018 IPR001623 DnaJ domain D934_05925 921112841b912fe85cd2b87b969166d9 293 PRINTS PR00625 DnaJ domain signature 25 40 5.6E-22 T 15-10-2018 IPR001623 DnaJ domain D934_05925 921112841b912fe85cd2b87b969166d9 293 PRINTS PR00625 DnaJ domain signature 41 61 5.6E-22 T 15-10-2018 IPR001623 DnaJ domain D934_05925 921112841b912fe85cd2b87b969166d9 293 SMART SM00271 4 61 3.3E-27 T 15-10-2018 IPR001623 DnaJ domain D934_05925 921112841b912fe85cd2b87b969166d9 293 Pfam PF00226 DnaJ domain 5 66 2.5E-24 T 15-10-2018 IPR001623 DnaJ domain D934_05925 921112841b912fe85cd2b87b969166d9 293 SUPERFAMILY SSF49493 200 282 2.88E-16 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 D934_05925 921112841b912fe85cd2b87b969166d9 293 Gene3D G3DSA:2.60.260.20 132 192 5.7E-13 T 15-10-2018 D934_05925 921112841b912fe85cd2b87b969166d9 293 Gene3D G3DSA:1.10.287.110 2 124 5.7E-33 T 15-10-2018 IPR036869 Chaperone J-domain superfamily D934_05925 921112841b912fe85cd2b87b969166d9 293 Pfam PF01556 DnaJ C terminal domain 138 271 3.2E-24 T 15-10-2018 IPR002939 Chaperone DnaJ, C-terminal D934_05925 921112841b912fe85cd2b87b969166d9 293 Gene3D G3DSA:2.60.260.20 194 271 3.0E-25 T 15-10-2018 D934_05925 921112841b912fe85cd2b87b969166d9 293 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 15-10-2018 IPR018253 DnaJ domain, conserved site D934_05440 d254ac54b00e93787044202d74dd5b83 364 Gene3D G3DSA:3.40.140.10 3 145 1.6E-44 T 15-10-2018 D934_05440 d254ac54b00e93787044202d74dd5b83 364 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 104 2.2E-19 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain D934_05440 d254ac54b00e93787044202d74dd5b83 364 SUPERFAMILY SSF53597 150 360 1.83E-55 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 D934_05440 d254ac54b00e93787044202d74dd5b83 364 PIRSF PIRSF006769 4 361 2.0E-121 T 15-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 D934_05440 d254ac54b00e93787044202d74dd5b83 364 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 357 2.9E-112 T 15-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 D934_05440 d254ac54b00e93787044202d74dd5b83 364 Gene3D G3DSA:3.40.430.10 146 362 2.7E-64 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 D934_05440 d254ac54b00e93787044202d74dd5b83 364 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 D934_05440 d254ac54b00e93787044202d74dd5b83 364 SUPERFAMILY SSF53927 8 149 3.35E-46 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 D934_05440 d254ac54b00e93787044202d74dd5b83 364 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 360 1.2E-52 T 15-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 D934_05440 d254ac54b00e93787044202d74dd5b83 364 Pfam PF01872 RibD C-terminal domain 152 356 7.8E-45 T 15-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 D934_11435 617413d9ae4b879f1c0ff294eba6bf6d 247 SUPERFAMILY SSF46785 12 91 8.16E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_11435 617413d9ae4b879f1c0ff294eba6bf6d 247 Gene3D G3DSA:1.10.10.10 92 189 4.6E-35 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_11435 617413d9ae4b879f1c0ff294eba6bf6d 247 PIRSF PIRSF019345 2 216 2.1E-81 T 15-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 D934_11435 617413d9ae4b879f1c0ff294eba6bf6d 247 SUPERFAMILY SSF46785 94 169 1.59E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_11435 617413d9ae4b879f1c0ff294eba6bf6d 247 Pfam PF04079 Segregation and condensation complex subunit ScpB 17 178 3.2E-50 T 15-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 D934_11435 617413d9ae4b879f1c0ff294eba6bf6d 247 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 16 180 1.5E-34 T 15-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 D934_11435 617413d9ae4b879f1c0ff294eba6bf6d 247 Gene3D G3DSA:1.10.10.10 11 91 3.1E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_01160 2a7850aef76f82d82518d86a3fa34f21 341 PIRSF PIRSF001619 2 321 3.8E-130 T 15-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D934_01160 2a7850aef76f82d82518d86a3fa34f21 341 TIGRFAM TIGR00433 bioB: biotin synthase 17 312 5.9E-120 T 15-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D934_01160 2a7850aef76f82d82518d86a3fa34f21 341 SMART SM00729 45 251 4.9E-36 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D934_01160 2a7850aef76f82d82518d86a3fa34f21 341 Pfam PF04055 Radical SAM superfamily 51 206 1.2E-13 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D934_01160 2a7850aef76f82d82518d86a3fa34f21 341 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 222 312 4.7E-20 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D934_01160 2a7850aef76f82d82518d86a3fa34f21 341 Hamap MF_01694 Biotin synthase [bioB]. 7 315 41.122 T 15-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D934_01160 2a7850aef76f82d82518d86a3fa34f21 341 Gene3D G3DSA:3.20.20.70 6 317 4.4E-124 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_01160 2a7850aef76f82d82518d86a3fa34f21 341 SMART SM00876 222 314 8.8E-48 T 15-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D934_01160 2a7850aef76f82d82518d86a3fa34f21 341 SUPERFAMILY SSF102114 7 315 2.09E-90 T 15-10-2018 D934_13200 7497b5813dbc9d3030501e71edd15954 613 Gene3D G3DSA:3.40.710.10 286 467 4.3E-111 T 15-10-2018 D934_13200 7497b5813dbc9d3030501e71edd15954 613 Gene3D G3DSA:3.90.1310.30 53 224 2.7E-48 T 15-10-2018 D934_13200 7497b5813dbc9d3030501e71edd15954 613 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 209 2.6E-17 T 15-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 D934_13200 7497b5813dbc9d3030501e71edd15954 613 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 13 561 42.819 T 15-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_13200 7497b5813dbc9d3030501e71edd15954 613 SUPERFAMILY SSF56519 57 224 1.15E-45 T 15-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 D934_13200 7497b5813dbc9d3030501e71edd15954 613 Pfam PF00905 Penicillin binding protein transpeptidase domain 250 546 2.7E-83 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 D934_13200 7497b5813dbc9d3030501e71edd15954 613 Gene3D G3DSA:3.30.450.330 226 550 4.3E-111 T 15-10-2018 D934_13200 7497b5813dbc9d3030501e71edd15954 613 SUPERFAMILY SSF56601 177 577 2.58E-96 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D934_09960 6d04abbf41752ba583a18f95f4358160 191 PIRSF PIRSF000232 3 191 9.4E-61 T 15-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like D934_09960 6d04abbf41752ba583a18f95f4358160 191 SUPERFAMILY SSF55469 8 188 4.06E-33 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 D934_09960 6d04abbf41752ba583a18f95f4358160 191 Gene3D G3DSA:3.40.109.10 7 169 1.7E-35 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 D934_09960 6d04abbf41752ba583a18f95f4358160 191 Pfam PF00881 Nitroreductase family 12 168 4.9E-21 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 D934_03820 7ce316a802cfc7e2c28df909463d98b8 305 Gene3D G3DSA:3.30.70.100 187 278 1.2E-26 T 15-10-2018 D934_03820 7ce316a802cfc7e2c28df909463d98b8 305 Gene3D G3DSA:2.30.30.60 135 184 2.5E-15 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily D934_03820 7ce316a802cfc7e2c28df909463d98b8 305 SUPERFAMILY SSF82861 34 118 1.96E-15 T 15-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 D934_03820 7ce316a802cfc7e2c28df909463d98b8 305 Pfam PF00924 Mechanosensitive ion channel 77 274 9.2E-52 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D934_03820 7ce316a802cfc7e2c28df909463d98b8 305 SUPERFAMILY SSF82689 188 284 1.31E-29 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 D934_03820 7ce316a802cfc7e2c28df909463d98b8 305 SUPERFAMILY SSF50182 119 185 1.14E-15 T 15-10-2018 IPR010920 LSM domain superfamily D934_13820 b6531eff93727265b7329858af0002ce 84 Gene3D G3DSA:3.40.1620.10 18 51 8.4E-8 T 15-10-2018 D934_13820 b6531eff93727265b7329858af0002ce 84 SUPERFAMILY SSF143120 4 52 9.94E-12 T 15-10-2018 IPR036165 YefM-like superfamily D934_13820 b6531eff93727265b7329858af0002ce 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 19 52 1.6E-7 T 15-10-2018 D934_13820 b6531eff93727265b7329858af0002ce 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 64 3.0E-10 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM D934_00295 e580f194cf1372dc8ef7a8f3314adb0b 432 Gene3D G3DSA:3.30.460.30 1 150 7.6E-51 T 15-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D934_00295 e580f194cf1372dc8ef7a8f3314adb0b 432 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 91 114 - T 15-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D934_00295 e580f194cf1372dc8ef7a8f3314adb0b 432 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 410 29.056 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D934_00295 e580f194cf1372dc8ef7a8f3314adb0b 432 SUPERFAMILY SSF69742 1 150 1.12E-45 T 15-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D934_00295 e580f194cf1372dc8ef7a8f3314adb0b 432 SUPERFAMILY SSF69075 309 409 6.15E-24 T 15-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D934_00295 e580f194cf1372dc8ef7a8f3314adb0b 432 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 407 1.2E-121 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D934_00295 e580f194cf1372dc8ef7a8f3314adb0b 432 Gene3D G3DSA:3.40.50.720 154 305 2.9E-41 T 15-10-2018 D934_00295 e580f194cf1372dc8ef7a8f3314adb0b 432 PIRSF PIRSF000445 1 421 1.3E-146 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D934_00295 e580f194cf1372dc8ef7a8f3314adb0b 432 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 164 297 2.8E-45 T 15-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase D934_00295 e580f194cf1372dc8ef7a8f3314adb0b 432 SUPERFAMILY SSF51735 154 307 1.9E-30 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_00295 e580f194cf1372dc8ef7a8f3314adb0b 432 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 148 1.2E-46 T 15-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D934_00295 e580f194cf1372dc8ef7a8f3314adb0b 432 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 313 407 7.5E-20 T 15-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D934_02260 e337012ef89204ee096e03f365305023 374 Pfam PF12161 HsdM N-terminal domain 168 292 7.4E-16 T 15-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain D934_02260 e337012ef89204ee096e03f365305023 374 Gene3D G3DSA:1.20.1260.30 166 295 2.2E-9 T 15-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily D934_02260 e337012ef89204ee096e03f365305023 374 Gene3D G3DSA:1.10.260.40 55 111 7.9E-13 T 15-10-2018 D934_02260 e337012ef89204ee096e03f365305023 374 SUPERFAMILY SSF53335 165 366 1.31E-28 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_02260 e337012ef89204ee096e03f365305023 374 Gene3D G3DSA:3.40.50.150 306 372 1.9E-14 T 15-10-2018 D934_02260 e337012ef89204ee096e03f365305023 374 Pfam PF01381 Helix-turn-helix 56 103 2.4E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_02260 e337012ef89204ee096e03f365305023 374 SMART SM00530 55 113 7.4E-5 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_02260 e337012ef89204ee096e03f365305023 374 SUPERFAMILY SSF47413 49 99 2.11E-10 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_02260 e337012ef89204ee096e03f365305023 374 Pfam PF02384 N-6 DNA Methylase 306 367 6.6E-15 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 D934_03345 9450b524c5d17a4b9ca9d6bf32ba3bec 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.6E-38 T 15-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03345 9450b524c5d17a4b9ca9d6bf32ba3bec 111 Gene3D G3DSA:3.90.470.10 1 111 3.5E-41 T 15-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 D934_03345 9450b524c5d17a4b9ca9d6bf32ba3bec 111 SUPERFAMILY SSF54843 1 108 4.97E-39 T 15-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 D934_03345 9450b524c5d17a4b9ca9d6bf32ba3bec 111 Pfam PF00237 Ribosomal protein L22p/L17e 6 107 4.9E-32 T 15-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 D934_03345 9450b524c5d17a4b9ca9d6bf32ba3bec 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 26.261 T 15-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03345 9450b524c5d17a4b9ca9d6bf32ba3bec 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 15-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_00915 91a076dd78918e25083d64e948194f9f 443 SMART SM00382 140 271 6.8E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_00915 91a076dd78918e25083d64e948194f9f 443 ProSitePatterns PS01008 DnaA protein signature. 401 420 - T 15-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 D934_00915 91a076dd78918e25083d64e948194f9f 443 SUPERFAMILY SSF52540 108 319 1.21E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00915 91a076dd78918e25083d64e948194f9f 443 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 354 420 1.6E-29 T 15-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 D934_00915 91a076dd78918e25083d64e948194f9f 443 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 440 1.5E-162 T 15-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 D934_00915 91a076dd78918e25083d64e948194f9f 443 SUPERFAMILY SSF48295 340 442 2.88E-34 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 D934_00915 91a076dd78918e25083d64e948194f9f 443 Pfam PF00308 Bacterial dnaA protein 107 325 2.4E-85 T 15-10-2018 IPR013317 Chromosomal replication initiator protein DnaA D934_00915 91a076dd78918e25083d64e948194f9f 443 SMART SM00760 351 420 1.3E-39 T 15-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 D934_00915 91a076dd78918e25083d64e948194f9f 443 Gene3D G3DSA:1.10.1750.10 350 443 2.4E-33 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 D934_00915 91a076dd78918e25083d64e948194f9f 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 239 266 1.2E-46 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D934_00915 91a076dd78918e25083d64e948194f9f 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 401 420 1.2E-46 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D934_00915 91a076dd78918e25083d64e948194f9f 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 205 219 1.2E-46 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D934_00915 91a076dd78918e25083d64e948194f9f 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 141 161 1.2E-46 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D934_00915 91a076dd78918e25083d64e948194f9f 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 173 187 1.2E-46 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D934_00915 91a076dd78918e25083d64e948194f9f 443 Gene3D G3DSA:1.10.8.60 274 345 5.0E-20 T 15-10-2018 D934_00915 91a076dd78918e25083d64e948194f9f 443 Gene3D G3DSA:3.30.300.180 5 102 1.4E-19 T 15-10-2018 IPR038454 DnaA, N-terminal domain superfamily D934_00915 91a076dd78918e25083d64e948194f9f 443 Gene3D G3DSA:3.40.50.300 105 273 2.1E-44 T 15-10-2018 D934_00915 91a076dd78918e25083d64e948194f9f 443 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 442 32.051 T 15-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 D934_00915 91a076dd78918e25083d64e948194f9f 443 Pfam PF11638 DnaA N-terminal domain 5 66 4.8E-14 T 15-10-2018 IPR024633 DnaA N-terminal domain D934_02540 50ae48acfe2af782fa13fe0be5bda335 327 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 124 5.5E-27 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D934_02540 50ae48acfe2af782fa13fe0be5bda335 327 SMART SM00859 7 128 7.2E-28 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D934_02540 50ae48acfe2af782fa13fe0be5bda335 327 Gene3D G3DSA:3.40.50.720 8 308 5.4E-86 T 15-10-2018 D934_02540 50ae48acfe2af782fa13fe0be5bda335 327 SUPERFAMILY SSF51735 6 151 1.16E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_02540 50ae48acfe2af782fa13fe0be5bda335 327 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 6 316 31.828 T 15-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D934_02540 50ae48acfe2af782fa13fe0be5bda335 327 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 7 319 3.7E-96 T 15-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D934_02540 50ae48acfe2af782fa13fe0be5bda335 327 SUPERFAMILY SSF55347 136 290 2.15E-33 T 15-10-2018 D934_02540 50ae48acfe2af782fa13fe0be5bda335 327 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 131 147 - T 15-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D934_02540 50ae48acfe2af782fa13fe0be5bda335 327 Gene3D G3DSA:3.30.360.10 134 290 5.4E-86 T 15-10-2018 D934_01830 90149ff1e5df65f3cf04de56ab2f0372 1193 SMART SM00481 7 88 4.0E-14 T 15-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal D934_01830 90149ff1e5df65f3cf04de56ab2f0372 1193 SUPERFAMILY SSF50249 1023 1094 6.57E-5 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_01830 90149ff1e5df65f3cf04de56ab2f0372 1193 Gene3D G3DSA:3.20.20.140 1 281 3.2E-78 T 15-10-2018 D934_01830 90149ff1e5df65f3cf04de56ab2f0372 1193 Gene3D G3DSA:1.10.10.1600 443 527 2.0E-28 T 15-10-2018 D934_01830 90149ff1e5df65f3cf04de56ab2f0372 1193 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1057 0.0 T 15-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_01830 90149ff1e5df65f3cf04de56ab2f0372 1193 Pfam PF14579 Helix-hairpin-helix motif 824 912 1.1E-26 T 15-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_01830 90149ff1e5df65f3cf04de56ab2f0372 1193 Pfam PF02811 PHP domain 8 183 2.7E-24 T 15-10-2018 IPR004013 PHP domain GO:0003824 D934_01830 90149ff1e5df65f3cf04de56ab2f0372 1193 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 304 748 8.3E-169 T 15-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_01830 90149ff1e5df65f3cf04de56ab2f0372 1193 Pfam PF01336 OB-fold nucleic acid binding domain 1026 1094 3.8E-8 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 D934_01830 90149ff1e5df65f3cf04de56ab2f0372 1193 SUPERFAMILY SSF89550 6 272 1.26E-10 T 15-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 D934_04210 fb9f1a7792bcf23a4e6b7c735fd3bd91 348 Gene3D G3DSA:3.40.50.300 3 248 2.4E-77 T 15-10-2018 D934_04210 fb9f1a7792bcf23a4e6b7c735fd3bd91 348 SUPERFAMILY SSF52540 3 243 8.57E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04210 fb9f1a7792bcf23a4e6b7c735fd3bd91 348 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_04210 fb9f1a7792bcf23a4e6b7c735fd3bd91 348 SUPERFAMILY SSF50331 240 340 1.25E-8 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal D934_04210 fb9f1a7792bcf23a4e6b7c735fd3bd91 348 Pfam PF00005 ABC transporter 19 164 9.3E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_04210 fb9f1a7792bcf23a4e6b7c735fd3bd91 348 Pfam PF12857 TOBE-like domain 284 337 7.5E-7 T 15-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 D934_04210 fb9f1a7792bcf23a4e6b7c735fd3bd91 348 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 3.8E-111 T 15-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 D934_04210 fb9f1a7792bcf23a4e6b7c735fd3bd91 348 SMART SM00382 27 214 1.1E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_06090 64380892d9a4de7f7711a275024062b2 288 PIRSF PIRSF016020 15 287 4.6E-37 T 15-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 D934_06090 64380892d9a4de7f7711a275024062b2 288 Gene3D G3DSA:2.70.98.10 4 287 2.1E-66 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 D934_06090 64380892d9a4de7f7711a275024062b2 288 Pfam PF01263 Aldose 1-epimerase 20 283 4.4E-44 T 15-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 D934_06090 64380892d9a4de7f7711a275024062b2 288 SUPERFAMILY SSF74650 7 283 3.27E-61 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 D934_10110 7c36aad521dd518223d5c607118598ce 92 Gene3D G3DSA:3.30.2310.20 1 92 3.0E-35 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D934_10110 7c36aad521dd518223d5c607118598ce 92 SUPERFAMILY SSF143011 1 92 4.71E-16 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D934_10110 7c36aad521dd518223d5c607118598ce 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 92 9.9E-26 T 15-10-2018 IPR007711 Toxin HigB-1 D934_03055 d5a31cfdd387ddebe67d87a6500b95d4 161 PRINTS PR00139 Asparaginase/glutaminase family signature 75 93 9.3E-6 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D934_03055 d5a31cfdd387ddebe67d87a6500b95d4 161 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 9.3E-6 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D934_03055 d5a31cfdd387ddebe67d87a6500b95d4 161 SUPERFAMILY SSF53774 1 152 6.93E-33 T 15-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 D934_03055 d5a31cfdd387ddebe67d87a6500b95d4 161 Gene3D G3DSA:3.40.50.1170 1 159 2.0E-29 T 15-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 D934_03055 d5a31cfdd387ddebe67d87a6500b95d4 161 Pfam PF00710 Asparaginase, N-terminal 4 152 1.1E-23 T 15-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 D934_03700 eb64709b0bbb5097d48f8271b277c61d 629 Gene3D G3DSA:3.10.20.310 60 146 5.8E-6 T 15-10-2018 D934_03700 eb64709b0bbb5097d48f8271b277c61d 629 Gene3D G3DSA:3.10.20.310 147 234 9.5E-19 T 15-10-2018 D934_03700 eb64709b0bbb5097d48f8271b277c61d 629 Pfam PF07244 Surface antigen variable number repeat 156 216 2.2E-6 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D934_03700 eb64709b0bbb5097d48f8271b277c61d 629 Gene3D G3DSA:2.40.160.50 312 629 9.8E-79 T 15-10-2018 D934_03700 eb64709b0bbb5097d48f8271b277c61d 629 Pfam PF17243 POTRA domain TamA domain 1 64 144 2.2E-14 T 15-10-2018 IPR035243 TamA, POTRA domain 1 D934_03700 eb64709b0bbb5097d48f8271b277c61d 629 Gene3D G3DSA:3.10.20.310 235 311 1.2E-14 T 15-10-2018 D934_03700 eb64709b0bbb5097d48f8271b277c61d 629 Pfam PF01103 Surface antigen 340 617 2.1E-31 T 15-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 D934_02865 2a45777ecd296530c321c6bd8c254318 240 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 14 233 2.2E-104 T 15-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 D934_02865 2a45777ecd296530c321c6bd8c254318 240 Pfam PF00005 ABC transporter 35 182 4.9E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_02865 2a45777ecd296530c321c6bd8c254318 240 SUPERFAMILY SSF52540 15 236 1.91E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_02865 2a45777ecd296530c321c6bd8c254318 240 SMART SM00382 43 231 8.7E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_02865 2a45777ecd296530c321c6bd8c254318 240 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_02865 2a45777ecd296530c321c6bd8c254318 240 Gene3D G3DSA:3.40.50.300 13 240 9.0E-59 T 15-10-2018 D934_02810 195b9e489db6557918106cbe2e856d51 477 Gene3D G3DSA:3.40.50.720 5 422 1.2E-140 T 15-10-2018 D934_02810 195b9e489db6557918106cbe2e856d51 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 156 184 3.7E-40 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D934_02810 195b9e489db6557918106cbe2e856d51 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 226 242 3.7E-40 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D934_02810 195b9e489db6557918106cbe2e856d51 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 132 145 3.7E-40 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D934_02810 195b9e489db6557918106cbe2e856d51 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 208 225 3.7E-40 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D934_02810 195b9e489db6557918106cbe2e856d51 477 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 313 339 3.7E-40 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D934_02810 195b9e489db6557918106cbe2e856d51 477 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 3 465 1.7E-134 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D934_02810 195b9e489db6557918106cbe2e856d51 477 SUPERFAMILY SSF51735 3 179 1.16E-41 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_02810 195b9e489db6557918106cbe2e856d51 477 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 2 474 66.724 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D934_02810 195b9e489db6557918106cbe2e856d51 477 SUPERFAMILY SSF55347 171 468 3.27E-97 T 15-10-2018 D934_02810 195b9e489db6557918106cbe2e856d51 477 Gene3D G3DSA:3.30.360.10 166 461 1.2E-140 T 15-10-2018 D934_02810 195b9e489db6557918106cbe2e856d51 477 PIRSF PIRSF000110 1 471 5.4E-156 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D934_02810 195b9e489db6557918106cbe2e856d51 477 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 7 176 2.0E-41 T 15-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D934_02810 195b9e489db6557918106cbe2e856d51 477 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 179 465 2.6E-94 T 15-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D934_08160 fda97c3b124c05a17b845ebf656d9631 120 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 9.4E-23 T 15-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D934_08160 fda97c3b124c05a17b845ebf656d9631 120 Gene3D G3DSA:3.30.1130.10 1 117 5.7E-38 T 15-10-2018 D934_08160 fda97c3b124c05a17b845ebf656d9631 120 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 4.9E-31 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D934_08160 fda97c3b124c05a17b845ebf656d9631 120 SMART SM00905 4 114 9.8E-44 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D934_08160 fda97c3b124c05a17b845ebf656d9631 120 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.3E-27 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D934_08160 fda97c3b124c05a17b845ebf656d9631 120 SUPERFAMILY SSF55620 1 116 1.78E-34 T 15-10-2018 D934_08135 5a12610c6f3acc28b767b586a0de0e41 292 Pfam PF03631 Virulence factor BrkB 34 281 8.0E-52 T 15-10-2018 IPR017039 Virulence factor BrkB D934_08135 5a12610c6f3acc28b767b586a0de0e41 292 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 24 280 2.2E-29 T 15-10-2018 IPR017039 Virulence factor BrkB D934_08135 5a12610c6f3acc28b767b586a0de0e41 292 PIRSF PIRSF035875 6 292 3.0E-67 T 15-10-2018 IPR017039 Virulence factor BrkB D934_07000 575faf69a4ef7b396dfe191c4f235cef 726 SUPERFAMILY SSF56672 186 724 1.89E-67 T 15-10-2018 D934_07000 575faf69a4ef7b396dfe191c4f235cef 726 Gene3D G3DSA:3.30.420.10 8 191 1.9E-5 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D934_07000 575faf69a4ef7b396dfe191c4f235cef 726 SUPERFAMILY SSF53098 30 178 1.67E-9 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_07000 575faf69a4ef7b396dfe191c4f235cef 726 Pfam PF00476 DNA polymerase family A 267 498 8.1E-11 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_07000 575faf69a4ef7b396dfe191c4f235cef 726 SMART SM00482 372 690 1.1E-6 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_01105 e4e6b72cc2ecf6608471c0ece2ee9154 161 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 161 1.1E-49 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 D934_01105 e4e6b72cc2ecf6608471c0ece2ee9154 161 SUPERFAMILY SSF51230 86 160 3.66E-24 T 15-10-2018 IPR011053 Single hybrid motif D934_01105 e4e6b72cc2ecf6608471c0ece2ee9154 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 107 121 9.5E-15 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 D934_01105 e4e6b72cc2ecf6608471c0ece2ee9154 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 122 135 9.5E-15 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 D934_01105 e4e6b72cc2ecf6608471c0ece2ee9154 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 90 103 9.5E-15 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 D934_01105 e4e6b72cc2ecf6608471c0ece2ee9154 161 Pfam PF00364 Biotin-requiring enzyme 87 160 7.5E-23 T 15-10-2018 IPR000089 Biotin/lipoyl attachment D934_01105 e4e6b72cc2ecf6608471c0ece2ee9154 161 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 117 134 - T 15-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D934_01105 e4e6b72cc2ecf6608471c0ece2ee9154 161 Gene3D G3DSA:2.40.50.100 84 160 5.8E-30 T 15-10-2018 D934_04775 7718fbd9c0aed96455dfd4176611d1bf 324 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 31 323 6.2E-106 T 15-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 D934_04775 7718fbd9c0aed96455dfd4176611d1bf 324 Gene3D G3DSA:1.10.150.130 23 117 1.7E-16 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal D934_04775 7718fbd9c0aed96455dfd4176611d1bf 324 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 25 324 56.163 T 15-10-2018 IPR023009 Tyrosine recombinase XerC/XerD D934_04775 7718fbd9c0aed96455dfd4176611d1bf 324 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 31 107 1.4E-13 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D934_04775 7718fbd9c0aed96455dfd4176611d1bf 324 SUPERFAMILY SSF47823 23 119 3.34E-29 T 15-10-2018 D934_04775 7718fbd9c0aed96455dfd4176611d1bf 324 Pfam PF00589 Phage integrase family 131 306 7.8E-46 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D934_04775 7718fbd9c0aed96455dfd4176611d1bf 324 Gene3D G3DSA:1.10.443.10 130 318 4.2E-65 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D934_04775 7718fbd9c0aed96455dfd4176611d1bf 324 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 23 324 54.754 T 15-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 D934_04775 7718fbd9c0aed96455dfd4176611d1bf 324 SUPERFAMILY SSF56349 125 322 1.0E-54 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D934_04690 0eefd1adc7f71fc0876c4526280cbb35 316 SUPERFAMILY SSF53795 137 306 1.62E-32 T 15-10-2018 D934_04690 0eefd1adc7f71fc0876c4526280cbb35 316 Pfam PF02603 HPr Serine kinase N terminus 5 132 7.0E-25 T 15-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 D934_04690 0eefd1adc7f71fc0876c4526280cbb35 316 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 309 4.8E-101 T 15-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 D934_04690 0eefd1adc7f71fc0876c4526280cbb35 316 SUPERFAMILY SSF75138 11 136 4.32E-31 T 15-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily D934_04690 0eefd1adc7f71fc0876c4526280cbb35 316 Gene3D G3DSA:3.40.1390.20 12 134 1.7E-26 T 15-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily D934_04690 0eefd1adc7f71fc0876c4526280cbb35 316 Gene3D G3DSA:3.40.50.300 135 315 8.1E-61 T 15-10-2018 D934_04690 0eefd1adc7f71fc0876c4526280cbb35 316 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 4 314 35.898 T 15-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 D934_04690 0eefd1adc7f71fc0876c4526280cbb35 316 Pfam PF07475 HPr Serine kinase C-terminal domain 136 306 9.8E-57 T 15-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 D934_01980 9933cc67ac13c2a131dcb20a307db6f1 300 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 7.1E-66 T 15-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_01980 9933cc67ac13c2a131dcb20a307db6f1 300 Gene3D G3DSA:3.30.2350.10 2 237 6.6E-79 T 15-10-2018 D934_01980 9933cc67ac13c2a131dcb20a307db6f1 300 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 235 8.2E-16 T 15-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 D934_01980 9933cc67ac13c2a131dcb20a307db6f1 300 SUPERFAMILY SSF88697 242 299 6.96E-8 T 15-10-2018 IPR015947 PUA-like superfamily D934_01980 9933cc67ac13c2a131dcb20a307db6f1 300 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 9 298 17.334 T 15-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_01980 9933cc67ac13c2a131dcb20a307db6f1 300 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 243 298 2.2E-11 T 15-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_01980 9933cc67ac13c2a131dcb20a307db6f1 300 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 31 179 8.9E-48 T 15-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 D934_01980 9933cc67ac13c2a131dcb20a307db6f1 300 SUPERFAMILY SSF55120 8 221 4.6E-71 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 Gene3D G3DSA:3.40.50.670 389 622 1.4E-84 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 SUPERFAMILY SSF54211 217 380 3.79E-44 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR00418 DNA topoisomerase II family signature 413 427 6.4E-57 T 15-10-2018 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR00418 DNA topoisomerase II family signature 478 494 6.4E-57 T 15-10-2018 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR00418 DNA topoisomerase II family signature 516 528 6.4E-57 T 15-10-2018 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR00418 DNA topoisomerase II family signature 66 79 6.4E-57 T 15-10-2018 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR00418 DNA topoisomerase II family signature 109 123 6.4E-57 T 15-10-2018 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR00418 DNA topoisomerase II family signature 265 278 6.4E-57 T 15-10-2018 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR00418 DNA topoisomerase II family signature 31 46 6.4E-57 T 15-10-2018 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR00418 DNA topoisomerase II family signature 496 513 6.4E-57 T 15-10-2018 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR00418 DNA topoisomerase II family signature 561 577 6.4E-57 T 15-10-2018 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 15-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 Gene3D G3DSA:3.30.230.10 218 388 8.5E-56 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 Gene3D G3DSA:3.30.565.10 3 215 1.1E-73 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 Pfam PF00204 DNA gyrase B 218 384 3.6E-38 T 15-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 627 46.046 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 SMART SM00387 27 173 2.0E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 4 623 2.5E-284 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 SMART SM00433 34 623 4.9E-202 T 15-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.3E-91 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.3E-91 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 1.3E-91 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 1.3E-91 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.3E-91 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 1.3E-91 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 1.3E-91 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 1.3E-91 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 1.3E-91 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 1.3E-91 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 1.3E-91 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.3E-91 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 1.3E-91 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.3E-91 T 15-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 Pfam PF01751 Toprim domain 412 506 7.4E-12 T 15-10-2018 IPR006171 TOPRIM domain D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 SUPERFAMILY SSF55874 4 215 3.8E-65 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 SUPERFAMILY SSF56719 387 620 2.25E-73 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 2.2E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_03915 4ec3ca9f61bfa3ec35dc28510d49b4dd 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 619 5.7E-23 T 15-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 D934_09895 066c6e16923a96c26120d16b59402aa5 344 PIRSF PIRSF028458 1 344 3.1E-189 T 15-10-2018 IPR016886 Predicted glycerophosphotransferase UCP028458 D934_09895 066c6e16923a96c26120d16b59402aa5 344 Gene3D G3DSA:3.40.50.12580 140 251 3.6E-6 T 15-10-2018 D934_09895 066c6e16923a96c26120d16b59402aa5 344 SUPERFAMILY SSF53756 13 310 1.41E-29 T 15-10-2018 D934_09895 066c6e16923a96c26120d16b59402aa5 344 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 154 308 4.7E-5 T 15-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 D934_08755 cb3202d751ad0936570a095dc841b80c 426 Gene3D G3DSA:3.40.50.1820 343 426 1.6E-19 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_08755 cb3202d751ad0936570a095dc841b80c 426 Gene3D G3DSA:3.40.50.1820 36 255 1.4E-56 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_08755 cb3202d751ad0936570a095dc841b80c 426 Pfam PF03583 Secretory lipase 130 210 5.4E-6 T 15-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 D934_08755 cb3202d751ad0936570a095dc841b80c 426 PIRSF PIRSF029171 4 426 1.5E-79 T 15-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 D934_08755 cb3202d751ad0936570a095dc841b80c 426 SUPERFAMILY SSF53474 89 373 1.74E-18 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_10735 0165066b1a267ad5bf418e4a7a4ca177 257 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 6 255 37.834 T 15-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 D934_10735 0165066b1a267ad5bf418e4a7a4ca177 257 Pfam PF02348 Cytidylyltransferase 10 228 1.1E-44 T 15-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 D934_10735 0165066b1a267ad5bf418e4a7a4ca177 257 Gene3D G3DSA:3.90.550.10 6 255 2.3E-81 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_10735 0165066b1a267ad5bf418e4a7a4ca177 257 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 8 247 7.5E-76 T 15-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 D934_10735 0165066b1a267ad5bf418e4a7a4ca177 257 SUPERFAMILY SSF53448 8 253 1.55E-54 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_04170 a6f60a465f34893b5426c32082580e1a 580 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 364 556 1.1E-53 T 15-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D934_04170 a6f60a465f34893b5426c32082580e1a 580 SUPERFAMILY SSF52374 19 362 7.32E-89 T 15-10-2018 D934_04170 a6f60a465f34893b5426c32082580e1a 580 Gene3D G3DSA:2.40.240.10 364 574 8.6E-72 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D934_04170 a6f60a465f34893b5426c32082580e1a 580 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 35 578 3.5E-198 T 15-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D934_04170 a6f60a465f34893b5426c32082580e1a 580 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 35 261 9.5E-77 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 D934_04170 a6f60a465f34893b5426c32082580e1a 580 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 277 361 2.7E-16 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 D934_04170 a6f60a465f34893b5426c32082580e1a 580 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 226 5.8E-9 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D934_04170 a6f60a465f34893b5426c32082580e1a 580 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 50 5.8E-9 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D934_04170 a6f60a465f34893b5426c32082580e1a 580 PRINTS PR00987 Glutamyl-tRNA synthetase signature 67 80 5.8E-9 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D934_04170 a6f60a465f34893b5426c32082580e1a 580 Gene3D G3DSA:1.10.1160.10 285 363 9.0E-34 T 15-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 D934_04170 a6f60a465f34893b5426c32082580e1a 580 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 6 577 52.008 T 15-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 D934_04170 a6f60a465f34893b5426c32082580e1a 580 SUPERFAMILY SSF50715 364 575 5.75E-70 T 15-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D934_04170 a6f60a465f34893b5426c32082580e1a 580 Gene3D G3DSA:3.90.800.10 107 215 2.4E-95 T 15-10-2018 D934_04170 a6f60a465f34893b5426c32082580e1a 580 Gene3D G3DSA:3.40.50.620 36 253 2.4E-95 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_04170 a6f60a465f34893b5426c32082580e1a 580 Gene3D G3DSA:2.40.240.10 372 490 8.6E-72 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D934_10190 a0670bf02b143eed7077cfe899c2c274 396 SUPERFAMILY SSF111369 47 292 3.79E-75 T 15-10-2018 D934_10190 a0670bf02b143eed7077cfe899c2c274 396 Gene3D G3DSA:1.10.287.470 93 166 1.6E-101 T 15-10-2018 D934_10190 a0670bf02b143eed7077cfe899c2c274 396 Gene3D G3DSA:2.40.50.100 58 202 1.6E-101 T 15-10-2018 D934_10190 a0670bf02b143eed7077cfe899c2c274 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 288 6.3E-16 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D934_10190 a0670bf02b143eed7077cfe899c2c274 396 Gene3D G3DSA:2.40.420.20 299 365 1.6E-101 T 15-10-2018 D934_10190 a0670bf02b143eed7077cfe899c2c274 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 366 9.6E-79 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D934_10190 a0670bf02b143eed7077cfe899c2c274 396 Gene3D G3DSA:2.40.30.170 45 298 1.6E-101 T 15-10-2018 D934_03620 fbe06c618b94a691851225ae207fca3f 609 Gene3D G3DSA:2.40.50.250 488 604 1.4E-123 T 15-10-2018 D934_03620 fbe06c618b94a691851225ae207fca3f 609 Gene3D G3DSA:2.40.30.10 200 300 1.8E-32 T 15-10-2018 D934_03620 fbe06c618b94a691851225ae207fca3f 609 Pfam PF00009 Elongation factor Tu GTP binding domain 5 196 5.5E-56 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_03620 fbe06c618b94a691851225ae207fca3f 609 SUPERFAMILY SSF52540 3 208 4.19E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_03620 fbe06c618b94a691851225ae207fca3f 609 Gene3D G3DSA:3.30.70.870 307 595 1.4E-123 T 15-10-2018 D934_03620 fbe06c618b94a691851225ae207fca3f 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 604 3.5E-281 T 15-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 D934_03620 fbe06c618b94a691851225ae207fca3f 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site D934_03620 fbe06c618b94a691851225ae207fca3f 609 SUPERFAMILY SSF54980 303 392 3.6E-15 T 15-10-2018 IPR035647 EF-G domain III/V-like D934_03620 fbe06c618b94a691851225ae207fca3f 609 PRINTS PR00315 GTP-binding elongation factor signature 88 99 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_03620 fbe06c618b94a691851225ae207fca3f 609 PRINTS PR00315 GTP-binding elongation factor signature 52 60 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_03620 fbe06c618b94a691851225ae207fca3f 609 PRINTS PR00315 GTP-binding elongation factor signature 124 133 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_03620 fbe06c618b94a691851225ae207fca3f 609 PRINTS PR00315 GTP-binding elongation factor signature 72 82 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_03620 fbe06c618b94a691851225ae207fca3f 609 PRINTS PR00315 GTP-binding elongation factor signature 8 21 4.0E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_03620 fbe06c618b94a691851225ae207fca3f 609 Pfam PF00679 Elongation factor G C-terminus 401 479 4.7E-20 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like D934_03620 fbe06c618b94a691851225ae207fca3f 609 SUPERFAMILY SSF54980 403 517 7.19E-26 T 15-10-2018 IPR035647 EF-G domain III/V-like D934_03620 fbe06c618b94a691851225ae207fca3f 609 SUPERFAMILY SSF50447 153 300 1.04E-29 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D934_03620 fbe06c618b94a691851225ae207fca3f 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 156 1.6E-26 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D934_03620 fbe06c618b94a691851225ae207fca3f 609 SMART SM00838 400 489 0.0047 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like D934_03620 fbe06c618b94a691851225ae207fca3f 609 Gene3D G3DSA:3.40.50.300 2 199 6.8E-67 T 15-10-2018 D934_03620 fbe06c618b94a691851225ae207fca3f 609 Pfam PF03144 Elongation factor Tu domain 2 223 290 4.6E-9 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D934_03620 fbe06c618b94a691851225ae207fca3f 609 Gene3D G3DSA:3.30.70.240 394 487 1.4E-123 T 15-10-2018 D934_13220 4ea9c25fbda971f163114d92f2a90bf9 620 SUPERFAMILY SSF116726 336 414 2.09E-14 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D934_13220 4ea9c25fbda971f163114d92f2a90bf9 620 SUPERFAMILY SSF116726 240 313 1.03E-8 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D934_13220 4ea9c25fbda971f163114d92f2a90bf9 620 Gene3D G3DSA:3.30.70.1450 335 408 1.3E-13 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D934_13220 4ea9c25fbda971f163114d92f2a90bf9 620 Gene3D G3DSA:3.30.70.1450 242 316 1.4E-6 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D934_13220 4ea9c25fbda971f163114d92f2a90bf9 620 Pfam PF02080 TrkA-C domain 246 314 1.8E-7 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 D934_13220 4ea9c25fbda971f163114d92f2a90bf9 620 Pfam PF02080 TrkA-C domain 338 404 9.6E-9 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 D934_13220 4ea9c25fbda971f163114d92f2a90bf9 620 Pfam PF03600 Citrate transporter 23 563 1.3E-44 T 15-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 D934_12870 8d7b2c968df51efa0376365996cf80c9 284 SUPERFAMILY SSF53850 49 284 1.8E-81 T 15-10-2018 D934_12870 8d7b2c968df51efa0376365996cf80c9 284 Gene3D G3DSA:3.40.190.10 49 280 2.7E-97 T 15-10-2018 D934_12870 8d7b2c968df51efa0376365996cf80c9 284 PIRSF PIRSF002854 18 284 2.8E-102 T 15-10-2018 IPR004872 Lipoprotein NlpA family D934_12870 8d7b2c968df51efa0376365996cf80c9 284 Gene3D G3DSA:3.40.190.10 130 234 2.7E-97 T 15-10-2018 D934_12870 8d7b2c968df51efa0376365996cf80c9 284 Pfam PF03180 NLPA lipoprotein 49 284 1.6E-99 T 15-10-2018 IPR004872 Lipoprotein NlpA family D934_07960 63d8dc573b8e80248a0fabb4e11396e0 190 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 35.401 T 15-10-2018 IPR022927 RNA pyrophosphohydrolase RppH D934_07960 63d8dc573b8e80248a0fabb4e11396e0 190 Pfam PF00293 NUDIX domain 7 130 1.7E-22 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D934_07960 63d8dc573b8e80248a0fabb4e11396e0 190 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D934_07960 63d8dc573b8e80248a0fabb4e11396e0 190 SUPERFAMILY SSF55811 6 151 1.34E-29 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D934_07960 63d8dc573b8e80248a0fabb4e11396e0 190 Gene3D G3DSA:3.90.79.10 1 159 4.2E-42 T 15-10-2018 D934_08075 83bea3a8074b53a3149016b3c01214a3 1121 Gene3D G3DSA:1.10.486.10 439 650 5.8E-125 T 15-10-2018 D934_08075 83bea3a8074b53a3149016b3c01214a3 1121 SUPERFAMILY SSF52540 10 331 1.51E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08075 83bea3a8074b53a3149016b3c01214a3 1121 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 10 1071 0.0 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 D934_08075 83bea3a8074b53a3149016b3c01214a3 1121 Gene3D G3DSA:1.10.10.160 88 182 7.4E-55 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily D934_08075 83bea3a8074b53a3149016b3c01214a3 1121 Gene3D G3DSA:3.40.50.10930 12 284 7.4E-55 T 15-10-2018 D934_08075 83bea3a8074b53a3149016b3c01214a3 1121 PIRSF PIRSF000980 9 1112 0.0 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 D934_08075 83bea3a8074b53a3149016b3c01214a3 1121 SUPERFAMILY SSF52980 805 1103 5.9E-51 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 D934_08075 83bea3a8074b53a3149016b3c01214a3 1121 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 10 789 8.9E-219 T 15-10-2018 D934_08075 83bea3a8074b53a3149016b3c01214a3 1121 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 9 1111 15.897 T 15-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 D934_08075 83bea3a8074b53a3149016b3c01214a3 1121 Gene3D G3DSA:3.40.50.300 319 789 5.8E-125 T 15-10-2018 D934_08075 83bea3a8074b53a3149016b3c01214a3 1121 SUPERFAMILY SSF52540 345 795 7.33E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_10385 c2c06e68ebecf20097f676f035782c54 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 9.5E-46 T 15-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 D934_10385 c2c06e68ebecf20097f676f035782c54 130 Gene3D G3DSA:3.30.230.10 2 130 1.7E-51 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D934_10385 c2c06e68ebecf20097f676f035782c54 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 15-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 D934_10385 c2c06e68ebecf20097f676f035782c54 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.555 T 15-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid D934_10385 c2c06e68ebecf20097f676f035782c54 130 SUPERFAMILY SSF54211 6 130 1.21E-47 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 Gene3D G3DSA:1.10.10.10 538 621 2.2E-36 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 12 621 47.502 T 15-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 Gene3D G3DSA:1.10.220.120 10 72 3.5E-27 T 15-10-2018 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 SUPERFAMILY SSF88946 126 455 1.26E-96 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 384 620 1.4E-120 T 15-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 Gene3D G3DSA:1.10.601.10 124 457 2.7E-114 T 15-10-2018 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 SUPERFAMILY SSF88659 461 534 2.78E-21 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 Pfam PF00140 Sigma-70 factor, region 1.2 109 140 5.2E-13 T 15-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 Pfam PF04546 Sigma-70, non-essential region 150 357 1.1E-49 T 15-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 412 425 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 384 609 7.5E-38 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 Pfam PF04542 Sigma-70 region 2 388 457 1.4E-20 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 Pfam PF03979 Sigma-70 factor, region 1.1 12 92 1.9E-28 T 15-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 581 607 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 PRINTS PR00046 Major sigma-70 factor signature 560 572 3.2E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 PRINTS PR00046 Major sigma-70 factor signature 596 607 3.2E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 PRINTS PR00046 Major sigma-70 factor signature 581 596 3.2E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 PRINTS PR00046 Major sigma-70 factor signature 412 425 3.2E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 PRINTS PR00046 Major sigma-70 factor signature 436 444 3.2E-31 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 SUPERFAMILY SSF88659 518 620 7.2E-28 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 Gene3D G3DSA:1.10.10.10 461 537 4.0E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 Pfam PF04545 Sigma-70, region 4 556 609 1.8E-19 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 D934_04225 6305f0560b01bfb3484eb3d54ac0c158 623 Pfam PF04539 Sigma-70 region 3 467 542 1.3E-30 T 15-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 D934_00465 1b505a04eda677cc82095ef56cfe1c5d 543 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D934_00465 1b505a04eda677cc82095ef56cfe1c5d 543 SMART SM00487 28 235 2.7E-55 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_00465 1b505a04eda677cc82095ef56cfe1c5d 543 Gene3D G3DSA:3.40.50.300 226 388 1.8E-43 T 15-10-2018 D934_00465 1b505a04eda677cc82095ef56cfe1c5d 543 Pfam PF00271 Helicase conserved C-terminal domain 244 352 4.3E-27 T 15-10-2018 IPR001650 Helicase, C-terminal D934_00465 1b505a04eda677cc82095ef56cfe1c5d 543 SUPERFAMILY SSF52540 84 363 1.25E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00465 1b505a04eda677cc82095ef56cfe1c5d 543 Pfam PF12300 ATP-dependent RNA helicase RhlB 377 516 1.7E-7 T 15-10-2018 IPR022077 ATP-dependent RNA helicase RhlB GO:0016817 D934_00465 1b505a04eda677cc82095ef56cfe1c5d 543 Gene3D G3DSA:3.40.50.300 2 222 2.2E-73 T 15-10-2018 D934_00465 1b505a04eda677cc82095ef56cfe1c5d 543 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 390 49.758 T 15-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 D934_00465 1b505a04eda677cc82095ef56cfe1c5d 543 Pfam PF00270 DEAD/DEAH box helicase 33 206 1.2E-46 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D934_00465 1b505a04eda677cc82095ef56cfe1c5d 543 SMART SM00490 271 352 4.0E-30 T 15-10-2018 IPR001650 Helicase, C-terminal D934_13030 8d605c666bfacbc22cb5840ddc5fe6d1 402 Gene3D G3DSA:3.30.9.50 78 271 6.1E-82 T 15-10-2018 D934_13030 8d605c666bfacbc22cb5840ddc5fe6d1 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 1.0E-19 T 15-10-2018 D934_13030 8d605c666bfacbc22cb5840ddc5fe6d1 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.0E-19 T 15-10-2018 D934_13030 8d605c666bfacbc22cb5840ddc5fe6d1 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 1.0E-19 T 15-10-2018 D934_13030 8d605c666bfacbc22cb5840ddc5fe6d1 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 1.0E-19 T 15-10-2018 D934_13030 8d605c666bfacbc22cb5840ddc5fe6d1 402 Gene3D G3DSA:3.50.50.60 6 337 6.1E-82 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_13030 8d605c666bfacbc22cb5840ddc5fe6d1 402 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 6 389 1.9E-126 T 15-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 D934_13030 8d605c666bfacbc22cb5840ddc5fe6d1 402 Pfam PF01494 FAD binding domain 6 347 6.8E-33 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 D934_13030 8d605c666bfacbc22cb5840ddc5fe6d1 402 SUPERFAMILY SSF51905 6 378 3.43E-47 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_13030 8d605c666bfacbc22cb5840ddc5fe6d1 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 389 3.3E-105 T 15-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 D934_06145 9f839187989fec60a963dce2e433eee2 426 Gene3D G3DSA:1.10.287.40 1 105 2.2E-15 T 15-10-2018 D934_06145 9f839187989fec60a963dce2e433eee2 426 Gene3D G3DSA:3.30.930.10 106 425 1.9E-114 T 15-10-2018 D934_06145 9f839187989fec60a963dce2e433eee2 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 38.226 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D934_06145 9f839187989fec60a963dce2e433eee2 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 1.2E-27 T 15-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 D934_06145 9f839187989fec60a963dce2e433eee2 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 8.0E-159 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D934_06145 9f839187989fec60a963dce2e433eee2 426 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 3.7E-33 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D934_06145 9f839187989fec60a963dce2e433eee2 426 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 3.7E-33 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D934_06145 9f839187989fec60a963dce2e433eee2 426 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 3.7E-33 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D934_06145 9f839187989fec60a963dce2e433eee2 426 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 3.7E-33 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D934_06145 9f839187989fec60a963dce2e433eee2 426 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 3.7E-33 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D934_06145 9f839187989fec60a963dce2e433eee2 426 PIRSF PIRSF001529 1 426 1.5E-163 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D934_06145 9f839187989fec60a963dce2e433eee2 426 SUPERFAMILY SSF46589 1 113 1.67E-23 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 D934_06145 9f839187989fec60a963dce2e433eee2 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 225 402 6.1E-33 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_06145 9f839187989fec60a963dce2e433eee2 426 SUPERFAMILY SSF55681 117 420 3.73E-96 T 15-10-2018 D934_00035 21389e97dd8c3f14f790333763f3c87b 231 Pfam PF00072 Response regulator receiver domain 5 117 2.5E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_00035 21389e97dd8c3f14f790333763f3c87b 231 SMART SM00862 150 225 1.5E-24 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D934_00035 21389e97dd8c3f14f790333763f3c87b 231 Gene3D G3DSA:3.40.50.2300 1 128 1.0E-37 T 15-10-2018 D934_00035 21389e97dd8c3f14f790333763f3c87b 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 6.9E-24 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D934_00035 21389e97dd8c3f14f790333763f3c87b 231 SUPERFAMILY SSF52172 3 124 1.71E-41 T 15-10-2018 IPR011006 CheY-like superfamily D934_00035 21389e97dd8c3f14f790333763f3c87b 231 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 226 1.4E-107 T 15-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 D934_00035 21389e97dd8c3f14f790333763f3c87b 231 SMART SM00448 3 116 2.0E-41 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_00035 21389e97dd8c3f14f790333763f3c87b 231 SUPERFAMILY SSF46894 126 225 3.68E-28 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D934_00035 21389e97dd8c3f14f790333763f3c87b 231 Gene3D G3DSA:1.10.10.10 129 227 3.8E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_00985 afe642b76984d6a021eea3822ad1e46e 331 Pfam PF01218 Coproporphyrinogen III oxidase 32 324 1.3E-125 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D934_00985 afe642b76984d6a021eea3822ad1e46e 331 PIRSF PIRSF000166 18 325 1.1E-119 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D934_00985 afe642b76984d6a021eea3822ad1e46e 331 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 190 214 - T 15-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D934_00985 afe642b76984d6a021eea3822ad1e46e 331 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 27 300 57.889 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D934_00985 afe642b76984d6a021eea3822ad1e46e 331 PRINTS PR00073 Coprogen oxidase signature 114 138 2.2E-81 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D934_00985 afe642b76984d6a021eea3822ad1e46e 331 PRINTS PR00073 Coprogen oxidase signature 72 93 2.2E-81 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D934_00985 afe642b76984d6a021eea3822ad1e46e 331 PRINTS PR00073 Coprogen oxidase signature 186 215 2.2E-81 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D934_00985 afe642b76984d6a021eea3822ad1e46e 331 PRINTS PR00073 Coprogen oxidase signature 257 284 2.2E-81 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D934_00985 afe642b76984d6a021eea3822ad1e46e 331 PRINTS PR00073 Coprogen oxidase signature 285 311 2.2E-81 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D934_00985 afe642b76984d6a021eea3822ad1e46e 331 PRINTS PR00073 Coprogen oxidase signature 55 71 2.2E-81 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D934_00985 afe642b76984d6a021eea3822ad1e46e 331 PRINTS PR00073 Coprogen oxidase signature 149 171 2.2E-81 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D934_00985 afe642b76984d6a021eea3822ad1e46e 331 Gene3D G3DSA:3.40.1500.10 21 324 6.8E-126 T 15-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D934_00985 afe642b76984d6a021eea3822ad1e46e 331 SUPERFAMILY SSF102886 30 323 1.31E-127 T 15-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D934_11050 ccf69d703891c492fc634c54217607fe 380 SUPERFAMILY SSF53756 2 370 4.13E-56 T 15-10-2018 D934_11050 ccf69d703891c492fc634c54217607fe 380 Pfam PF00534 Glycosyl transferases group 1 188 329 1.0E-20 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 D934_11050 ccf69d703891c492fc634c54217607fe 380 Pfam PF13439 Glycosyltransferase Family 4 14 179 9.3E-17 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D934_11050 ccf69d703891c492fc634c54217607fe 380 Gene3D G3DSA:3.40.50.2000 1 188 1.2E-24 T 15-10-2018 D934_11050 ccf69d703891c492fc634c54217607fe 380 Gene3D G3DSA:3.40.50.2000 189 339 1.1E-23 T 15-10-2018 D934_11300 e76ecc04149f6a054c3243f462224cb9 965 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 940 22.443 T 15-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 D934_11300 e76ecc04149f6a054c3243f462224cb9 965 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_11300 e76ecc04149f6a054c3243f462224cb9 965 Gene3D G3DSA:1.10.8.280 288 404 2.6E-243 T 15-10-2018 D934_11300 e76ecc04149f6a054c3243f462224cb9 965 SUPERFAMILY SSF52540 622 908 3.73E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_11300 e76ecc04149f6a054c3243f462224cb9 965 SUPERFAMILY SSF52540 5 570 1.41E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_11300 e76ecc04149f6a054c3243f462224cb9 965 Pfam PF00005 ABC transporter 624 860 1.2E-9 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_11300 e76ecc04149f6a054c3243f462224cb9 965 Gene3D G3DSA:3.40.50.300 617 936 1.0E-137 T 15-10-2018 D934_11300 e76ecc04149f6a054c3243f462224cb9 965 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_11300 e76ecc04149f6a054c3243f462224cb9 965 Gene3D G3DSA:1.20.1580.10 91 493 2.6E-243 T 15-10-2018 D934_11300 e76ecc04149f6a054c3243f462224cb9 965 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 925 0.0 T 15-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 D934_11300 e76ecc04149f6a054c3243f462224cb9 965 Gene3D G3DSA:3.40.50.300 7 596 2.6E-243 T 15-10-2018 D934_11300 e76ecc04149f6a054c3243f462224cb9 965 Gene3D G3DSA:1.20.1580.10 692 830 1.0E-137 T 15-10-2018 D934_11300 e76ecc04149f6a054c3243f462224cb9 965 Gene3D G3DSA:3.30.190.20 131 240 2.6E-243 T 15-10-2018 D934_04035 d51d8979aa0259c7c4e9ff7b09fd61a7 694 Pfam PF00905 Penicillin binding protein transpeptidase domain 274 612 1.5E-67 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 D934_04035 d51d8979aa0259c7c4e9ff7b09fd61a7 694 Gene3D G3DSA:3.90.1310.10 74 252 3.1E-43 T 15-10-2018 D934_04035 d51d8979aa0259c7c4e9ff7b09fd61a7 694 Pfam PF03717 Penicillin-binding Protein dimerisation domain 73 241 3.5E-42 T 15-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 D934_04035 d51d8979aa0259c7c4e9ff7b09fd61a7 694 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 27 615 2.6E-211 T 15-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_04035 d51d8979aa0259c7c4e9ff7b09fd61a7 694 SUPERFAMILY SSF56601 257 615 7.85E-94 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D934_04035 d51d8979aa0259c7c4e9ff7b09fd61a7 694 Gene3D G3DSA:3.40.710.10 256 617 9.4E-92 T 15-10-2018 D934_04035 d51d8979aa0259c7c4e9ff7b09fd61a7 694 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 11 619 46.21 T 15-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_04035 d51d8979aa0259c7c4e9ff7b09fd61a7 694 SUPERFAMILY SSF56519 65 256 6.28E-47 T 15-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 D934_04035 d51d8979aa0259c7c4e9ff7b09fd61a7 694 Gene3D G3DSA:3.30.1390.30 93 168 3.1E-43 T 15-10-2018 D934_13550 268743acfd563cc46f21e6aba58052ef 316 SUPERFAMILY SSF55681 4 311 3.11E-68 T 15-10-2018 D934_13550 268743acfd563cc46f21e6aba58052ef 316 Pfam PF00152 tRNA synthetases class II (D, K and N) 5 312 1.9E-34 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_13550 268743acfd563cc46f21e6aba58052ef 316 Gene3D G3DSA:3.30.930.10 1 315 1.9E-92 T 15-10-2018 D934_13550 268743acfd563cc46f21e6aba58052ef 316 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 7 311 1.8E-112 T 15-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 D934_13550 268743acfd563cc46f21e6aba58052ef 316 PRINTS PR00982 Lysyl-tRNA synthetase signature 90 107 9.0E-7 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D934_13550 268743acfd563cc46f21e6aba58052ef 316 PRINTS PR00982 Lysyl-tRNA synthetase signature 200 216 9.0E-7 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D934_13550 268743acfd563cc46f21e6aba58052ef 316 PRINTS PR00982 Lysyl-tRNA synthetase signature 22 32 9.0E-7 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D934_13545 c2538fc8e8f3b7f3dac29ce7540c091d 229 Pfam PF11218 Protein of unknown function (DUF3011) 32 226 2.3E-90 T 15-10-2018 IPR021381 Protein of unknown function DUF3011 D934_11725 8706ab28486f712bcfb62431c2975d35 228 Hamap MF_00942 Endonuclease III [nth]. 10 225 35.989 T 15-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 D934_11725 8706ab28486f712bcfb62431c2975d35 228 Gene3D G3DSA:1.10.1670.10 28 219 2.4E-74 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 D934_11725 8706ab28486f712bcfb62431c2975d35 228 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 203 219 4.2E-6 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 D934_11725 8706ab28486f712bcfb62431c2975d35 228 Gene3D G3DSA:1.10.340.30 37 148 2.4E-74 T 15-10-2018 D934_11725 8706ab28486f712bcfb62431c2975d35 228 PIRSF PIRSF001435 15 227 3.1E-50 T 15-10-2018 D934_11725 8706ab28486f712bcfb62431c2975d35 228 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 50 184 8.7E-19 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 D934_11725 8706ab28486f712bcfb62431c2975d35 228 ProSitePatterns PS01155 Endonuclease III family signature. 118 147 - T 15-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 D934_11725 8706ab28486f712bcfb62431c2975d35 228 TIGRFAM TIGR01083 nth: endonuclease III 21 210 2.7E-82 T 15-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 D934_11725 8706ab28486f712bcfb62431c2975d35 228 SMART SM00525 202 222 1.8E-5 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 D934_11725 8706ab28486f712bcfb62431c2975d35 228 SUPERFAMILY SSF48150 21 224 7.69E-71 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 D934_11725 8706ab28486f712bcfb62431c2975d35 228 Pfam PF00633 Helix-hairpin-helix motif 116 143 6.1E-8 T 15-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 D934_11725 8706ab28486f712bcfb62431c2975d35 228 SMART SM00478 54 201 2.4E-52 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 D934_07645 a651c3eef4ab401323452f43421553f5 394 Gene3D G3DSA:1.10.443.10 206 369 6.8E-9 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D934_07645 a651c3eef4ab401323452f43421553f5 394 SUPERFAMILY SSF56349 71 370 4.32E-28 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D934_07645 a651c3eef4ab401323452f43421553f5 394 Gene3D G3DSA:1.10.150.130 71 182 1.7E-9 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal D934_10670 6857cb77ca5ad93125d4788ed5a83ff5 621 SMART SM00465 21 102 1.7E-16 T 15-10-2018 IPR000305 GIY-YIG endonuclease D934_10670 6857cb77ca5ad93125d4788ed5a83ff5 621 Gene3D G3DSA:1.10.150.20 553 607 1.0E-20 T 15-10-2018 D934_10670 6857cb77ca5ad93125d4788ed5a83ff5 621 Gene3D G3DSA:3.40.1440.10 10 106 4.8E-29 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 D934_10670 6857cb77ca5ad93125d4788ed5a83ff5 621 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 605 26.609 T 15-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 D934_10670 6857cb77ca5ad93125d4788ed5a83ff5 621 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 15 585 1.2E-175 T 15-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 D934_10670 6857cb77ca5ad93125d4788ed5a83ff5 621 SUPERFAMILY SSF82771 21 104 3.14E-19 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 D934_10670 6857cb77ca5ad93125d4788ed5a83ff5 621 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 384 540 4.3E-47 T 15-10-2018 IPR001162 UvrC family homology region D934_10670 6857cb77ca5ad93125d4788ed5a83ff5 621 Pfam PF01541 GIY-YIG catalytic domain 23 97 1.7E-7 T 15-10-2018 IPR000305 GIY-YIG endonuclease D934_10670 6857cb77ca5ad93125d4788ed5a83ff5 621 Gene3D G3DSA:3.30.420.340 377 550 1.8E-46 T 15-10-2018 IPR038476 UvrC homology region 2 superfamily D934_10670 6857cb77ca5ad93125d4788ed5a83ff5 621 SUPERFAMILY SSF47781 521 607 6.35E-20 T 15-10-2018 IPR010994 RuvA domain 2-like D934_10670 6857cb77ca5ad93125d4788ed5a83ff5 621 SUPERFAMILY SSF46600 193 246 1.06E-11 T 15-10-2018 IPR036876 UVR domain superfamily D934_10670 6857cb77ca5ad93125d4788ed5a83ff5 621 SMART SM00278 586 605 88.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D934_10670 6857cb77ca5ad93125d4788ed5a83ff5 621 SMART SM00278 554 573 7.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D934_10670 6857cb77ca5ad93125d4788ed5a83ff5 621 Pfam PF02151 UvrB/uvrC motif 210 240 5.7E-7 T 15-10-2018 IPR001943 UVR domain GO:0005515 D934_04630 61f9660985499595e0b85d70dcd54300 164 PIRSF PIRSF002070 1 163 4.3E-36 T 15-10-2018 D934_04630 61f9660985499595e0b85d70dcd54300 164 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 164 1.4E-50 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D934_04630 61f9660985499595e0b85d70dcd54300 164 SUPERFAMILY SSF50249 3 164 2.84E-55 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_04630 61f9660985499595e0b85d70dcd54300 164 Pfam PF00436 Single-strand binding protein family 5 108 2.0E-38 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 D934_04630 61f9660985499595e0b85d70dcd54300 164 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 35.543 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D934_04630 61f9660985499595e0b85d70dcd54300 164 Gene3D G3DSA:2.40.50.140 1 119 2.8E-43 T 15-10-2018 D934_10000 c15c9f9384bc62683d20871feb312885 237 Gene3D G3DSA:3.30.70.260 145 217 2.9E-75 T 15-10-2018 D934_10000 c15c9f9384bc62683d20871feb312885 237 Gene3D G3DSA:3.40.50.1360 27 228 2.9E-75 T 15-10-2018 D934_10000 c15c9f9384bc62683d20871feb312885 237 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 27 232 6.3E-66 T 15-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 D934_10000 c15c9f9384bc62683d20871feb312885 237 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 23 237 32.534 T 15-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 D934_10000 c15c9f9384bc62683d20871feb312885 237 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 69 232 8.6E-57 T 15-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 D934_10000 c15c9f9384bc62683d20871feb312885 237 SUPERFAMILY SSF100950 23 166 5.86E-44 T 15-10-2018 IPR037171 NagB/RpiA transferase-like D934_10000 c15c9f9384bc62683d20871feb312885 237 SUPERFAMILY SSF75445 147 219 1.18E-22 T 15-10-2018 D934_01945 37a6184a3a30bcd1e99eac951af06f6f 142 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 21 138 9.0E-64 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 D934_01945 37a6184a3a30bcd1e99eac951af06f6f 142 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 17 142 1.1E-48 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 D934_01945 37a6184a3a30bcd1e99eac951af06f6f 142 Pfam PF02261 Aspartate decarboxylase 17 130 5.0E-47 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 D934_01945 37a6184a3a30bcd1e99eac951af06f6f 142 PIRSF PIRSF006246 17 141 9.4E-47 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 D934_01945 37a6184a3a30bcd1e99eac951af06f6f 142 SUPERFAMILY SSF50692 17 137 6.96E-46 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily D934_01945 37a6184a3a30bcd1e99eac951af06f6f 142 Gene3D G3DSA:2.40.40.20 17 142 5.3E-53 T 15-10-2018 D934_01945 37a6184a3a30bcd1e99eac951af06f6f 142 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 142 62.097 T 15-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 D934_10010 0af07abe569ae87ed731c391db3d9e19 566 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 28 562 7.0E-124 T 15-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 D934_10010 0af07abe569ae87ed731c391db3d9e19 566 Pfam PF00999 Sodium/hydrogen exchanger family 32 440 2.5E-64 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 D934_09470 bd45500144ac3cf2802560a7e47372c6 343 Gene3D G3DSA:1.10.8.60 182 255 6.2E-31 T 15-10-2018 D934_09470 bd45500144ac3cf2802560a7e47372c6 343 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 343 174.392 T 15-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 D934_09470 bd45500144ac3cf2802560a7e47372c6 343 SUPERFAMILY SSF46785 257 328 1.97E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_09470 bd45500144ac3cf2802560a7e47372c6 343 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 235 4.4E-117 T 15-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 D934_09470 bd45500144ac3cf2802560a7e47372c6 343 SUPERFAMILY SSF52540 20 252 1.08E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_09470 bd45500144ac3cf2802560a7e47372c6 343 Gene3D G3DSA:3.40.50.300 18 181 1.6E-37 T 15-10-2018 D934_09470 bd45500144ac3cf2802560a7e47372c6 343 SMART SM00382 51 182 2.1E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_09470 bd45500144ac3cf2802560a7e47372c6 343 Gene3D G3DSA:1.10.10.10 257 335 3.4E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_09470 bd45500144ac3cf2802560a7e47372c6 343 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 250 333 3.0E-42 T 15-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 D934_09470 bd45500144ac3cf2802560a7e47372c6 343 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 1.9E-32 T 15-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 D934_09470 bd45500144ac3cf2802560a7e47372c6 343 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 23 326 1.0E-144 T 15-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 D934_00005 bff686d063e4d70ddfb4e7509c56789e 348 Pfam PF02321 Outer membrane efflux protein 235 348 2.0E-17 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D934_00005 bff686d063e4d70ddfb4e7509c56789e 348 Pfam PF02321 Outer membrane efflux protein 24 210 2.4E-21 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D934_00005 bff686d063e4d70ddfb4e7509c56789e 348 Gene3D G3DSA:1.20.1600.10 22 348 1.0E-79 T 15-10-2018 D934_00005 bff686d063e4d70ddfb4e7509c56789e 348 SUPERFAMILY SSF56954 1 347 1.44E-66 T 15-10-2018 D934_00005 bff686d063e4d70ddfb4e7509c56789e 348 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 347 3.7E-90 T 15-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 D934_03155 4548332112118c6e65a116cb04e87c8c 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 557 569 2.6E-24 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D934_03155 4548332112118c6e65a116cb04e87c8c 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 666 679 2.6E-24 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D934_03155 4548332112118c6e65a116cb04e87c8c 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 744 763 2.6E-24 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D934_03155 4548332112118c6e65a116cb04e87c8c 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 537 555 2.6E-24 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D934_03155 4548332112118c6e65a116cb04e87c8c 868 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 845 858 2.6E-24 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D934_03155 4548332112118c6e65a116cb04e87c8c 868 Gene3D G3DSA:3.30.70.260 323 395 9.0E-35 T 15-10-2018 D934_03155 4548332112118c6e65a116cb04e87c8c 868 Gene3D G3DSA:3.30.70.260 317 456 9.0E-35 T 15-10-2018 D934_03155 4548332112118c6e65a116cb04e87c8c 868 ProSitePatterns PS00324 Aspartokinase signature. 12 20 - T 15-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D934_03155 4548332112118c6e65a116cb04e87c8c 868 Gene3D G3DSA:2.40.37.10 510 867 1.2E-95 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D934_03155 4548332112118c6e65a116cb04e87c8c 868 SUPERFAMILY SSF55021 389 462 2.44E-9 T 15-10-2018 D934_03155 4548332112118c6e65a116cb04e87c8c 868 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 9 460 1.2E-81 T 15-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D934_03155 4548332112118c6e65a116cb04e87c8c 868 SUPERFAMILY SSF53633 10 305 5.11E-57 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D934_03155 4548332112118c6e65a116cb04e87c8c 868 SUPERFAMILY SSF50621 734 866 1.57E-41 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D934_03155 4548332112118c6e65a116cb04e87c8c 868 SUPERFAMILY SSF55021 313 405 1.14E-11 T 15-10-2018 D934_03155 4548332112118c6e65a116cb04e87c8c 868 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 509 867 3.9E-90 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D934_03155 4548332112118c6e65a116cb04e87c8c 868 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 515 845 2.0E-20 T 15-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 D934_03155 4548332112118c6e65a116cb04e87c8c 868 Gene3D G3DSA:1.20.120.1320 52 141 5.4E-70 T 15-10-2018 D934_03155 4548332112118c6e65a116cb04e87c8c 868 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 697 713 - T 15-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site D934_03155 4548332112118c6e65a116cb04e87c8c 868 Gene3D G3DSA:3.40.1160.10 12 303 5.4E-70 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D934_03155 4548332112118c6e65a116cb04e87c8c 868 SUPERFAMILY SSF51419 510 756 3.2E-56 T 15-10-2018 IPR029066 PLP-binding barrel D934_03155 4548332112118c6e65a116cb04e87c8c 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 641 650 5.1E-13 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D934_03155 4548332112118c6e65a116cb04e87c8c 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 772 790 5.1E-13 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D934_03155 4548332112118c6e65a116cb04e87c8c 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 855 868 5.1E-13 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D934_03155 4548332112118c6e65a116cb04e87c8c 868 PRINTS PR01181 Diaminopimelate decarboxylase signature 555 572 5.1E-13 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D934_03155 4548332112118c6e65a116cb04e87c8c 868 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 519 754 4.0E-41 T 15-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 D934_03155 4548332112118c6e65a116cb04e87c8c 868 PIRSF PIRSF036459 1 868 0.0 T 15-10-2018 IPR011246 Bifunctional diaminopimelate decarboxylase/aspartate kinase D934_03155 4548332112118c6e65a116cb04e87c8c 868 Gene3D G3DSA:3.20.20.10 516 758 1.2E-95 T 15-10-2018 IPR029066 PLP-binding barrel D934_03155 4548332112118c6e65a116cb04e87c8c 868 Pfam PF00696 Amino acid kinase family 10 291 1.0E-41 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D934_03155 4548332112118c6e65a116cb04e87c8c 868 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 537 555 - T 15-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site D934_13175 6137fbfe38597e9526f9b784b117f2eb 367 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 15 152 4.4E-37 T 15-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_13175 6137fbfe38597e9526f9b784b117f2eb 367 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 15 366 35.58 T 15-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_13175 6137fbfe38597e9526f9b784b117f2eb 367 SUPERFAMILY SSF53756 14 364 1.0E-108 T 15-10-2018 D934_13175 6137fbfe38597e9526f9b784b117f2eb 367 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 12 362 4.0E-111 T 15-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_13175 6137fbfe38597e9526f9b784b117f2eb 367 Gene3D G3DSA:3.40.50.2000 169 350 5.8E-107 T 15-10-2018 D934_13175 6137fbfe38597e9526f9b784b117f2eb 367 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 192 356 7.9E-37 T 15-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 D934_13175 6137fbfe38597e9526f9b784b117f2eb 367 Gene3D G3DSA:3.40.50.2000 16 356 5.8E-107 T 15-10-2018 D934_11855 6cdcb6524e0061f81d64e760136fe116 456 Gene3D G3DSA:3.10.580.10 334 456 2.2E-17 T 15-10-2018 D934_11855 6cdcb6524e0061f81d64e760136fe116 456 Gene3D G3DSA:3.40.50.1100 9 308 3.0E-96 T 15-10-2018 D934_11855 6cdcb6524e0061f81d64e760136fe116 456 SMART SM00116 343 390 1.2E-7 T 15-10-2018 IPR000644 CBS domain D934_11855 6cdcb6524e0061f81d64e760136fe116 456 Pfam PF00571 CBS domain 403 451 8.0E-4 T 15-10-2018 IPR000644 CBS domain D934_11855 6cdcb6524e0061f81d64e760136fe116 456 Pfam PF00571 CBS domain 343 388 3.1E-7 T 15-10-2018 IPR000644 CBS domain D934_11855 6cdcb6524e0061f81d64e760136fe116 456 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 15-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 D934_11855 6cdcb6524e0061f81d64e760136fe116 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 302 8.0E-57 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D934_11855 6cdcb6524e0061f81d64e760136fe116 456 SUPERFAMILY SSF53686 4 321 7.2E-82 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D934_11855 6cdcb6524e0061f81d64e760136fe116 456 Gene3D G3DSA:3.40.50.1100 40 153 3.0E-96 T 15-10-2018 D934_11855 6cdcb6524e0061f81d64e760136fe116 456 SUPERFAMILY SSF54631 340 453 1.11E-18 T 15-10-2018 D934_08475 01bbf74d3e0219c7843852b2f211fe42 486 Pfam PF03796 DnaB-like helicase C terminal domain 195 443 3.4E-75 T 15-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 D934_08475 01bbf74d3e0219c7843852b2f211fe42 486 Pfam PF00772 DnaB-like helicase N terminal domain 19 119 4.6E-32 T 15-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 D934_08475 01bbf74d3e0219c7843852b2f211fe42 486 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 19 442 1.5E-122 T 15-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 D934_08475 01bbf74d3e0219c7843852b2f211fe42 486 Gene3D G3DSA:3.40.50.300 178 461 3.4E-80 T 15-10-2018 D934_08475 01bbf74d3e0219c7843852b2f211fe42 486 SUPERFAMILY SSF52540 195 442 1.48E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08475 01bbf74d3e0219c7843852b2f211fe42 486 SUPERFAMILY SSF48024 17 128 1.83E-35 T 15-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 D934_08475 01bbf74d3e0219c7843852b2f211fe42 486 Gene3D G3DSA:1.10.860.10 13 176 7.6E-50 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal D934_06590 01bbf74d3e0219c7843852b2f211fe42 486 Pfam PF03796 DnaB-like helicase C terminal domain 195 443 3.4E-75 T 15-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 D934_06590 01bbf74d3e0219c7843852b2f211fe42 486 Pfam PF00772 DnaB-like helicase N terminal domain 19 119 4.6E-32 T 15-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 D934_06590 01bbf74d3e0219c7843852b2f211fe42 486 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 19 442 1.5E-122 T 15-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 D934_06590 01bbf74d3e0219c7843852b2f211fe42 486 Gene3D G3DSA:3.40.50.300 178 461 3.4E-80 T 15-10-2018 D934_06590 01bbf74d3e0219c7843852b2f211fe42 486 SUPERFAMILY SSF52540 195 442 1.48E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_06590 01bbf74d3e0219c7843852b2f211fe42 486 SUPERFAMILY SSF48024 17 128 1.83E-35 T 15-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 D934_06590 01bbf74d3e0219c7843852b2f211fe42 486 Gene3D G3DSA:1.10.860.10 13 176 7.6E-50 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal D934_13810 7733fd269e9ceb6ab9e4dfbd94014f7d 200 Gene3D G3DSA:3.40.50.1390 11 134 1.9E-44 T 15-10-2018 D934_13810 7733fd269e9ceb6ab9e4dfbd94014f7d 200 ProSitePatterns PS00397 Site-specific recombinases active site. 15 23 - T 15-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 D934_13810 7733fd269e9ceb6ab9e4dfbd94014f7d 200 Pfam PF02796 Helix-turn-helix domain of resolvase 147 188 3.2E-8 T 15-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 D934_13810 7733fd269e9ceb6ab9e4dfbd94014f7d 200 SMART SM00857 12 145 4.6E-51 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D934_13810 7733fd269e9ceb6ab9e4dfbd94014f7d 200 Pfam PF00239 Resolvase, N terminal domain 13 144 1.1E-42 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D934_13810 7733fd269e9ceb6ab9e4dfbd94014f7d 200 SUPERFAMILY SSF53041 13 144 1.31E-39 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 D934_04860 aca6eb8d70939fd64d11c1df793ff0dd 72 SUPERFAMILY SSF50249 1 70 4.71E-26 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_04860 aca6eb8d70939fd64d11c1df793ff0dd 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.769 T 15-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 D934_04860 aca6eb8d70939fd64d11c1df793ff0dd 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 2.4E-35 T 15-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 D934_04860 aca6eb8d70939fd64d11c1df793ff0dd 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 6.6E-26 T 15-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 D934_04860 aca6eb8d70939fd64d11c1df793ff0dd 72 SMART SM00316 4 72 7.1E-4 T 15-10-2018 IPR022967 RNA-binding domain, S1 D934_04860 aca6eb8d70939fd64d11c1df793ff0dd 72 Gene3D G3DSA:2.40.50.140 1 72 1.1E-35 T 15-10-2018 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 SUPERFAMILY SSF52374 5 663 1.71E-132 T 15-10-2018 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 544 557 3.6E-31 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 419 434 3.6E-31 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 3.6E-31 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 577 586 3.6E-31 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 3.6E-31 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 Gene3D G3DSA:3.40.50.620 26 645 1.5E-218 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 934 20.965 T 15-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 Gene3D G3DSA:3.90.740.10 196 426 1.5E-218 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 Pfam PF08264 Anticodon-binding domain of tRNA 701 856 5.5E-24 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 16 858 2.2E-265 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 SUPERFAMILY SSF47323 668 934 3.92E-68 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 657 2.5E-194 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 SUPERFAMILY SSF50677 205 421 6.28E-41 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 Pfam PF06827 Zinc finger found in FPG and IleRS 905 931 3.3E-7 T 15-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 D934_11265 34bb9ba5f32271659beb59b2330cf71f 943 Gene3D G3DSA:1.10.730.20 656 934 4.7E-84 T 15-10-2018 D934_08875 24593ff9d7cba85f11861ade12874383 148 PIRSF PIRSF002070 1 147 4.7E-33 T 15-10-2018 D934_08875 24593ff9d7cba85f11861ade12874383 148 SUPERFAMILY SSF50249 3 148 8.57E-51 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_08875 24593ff9d7cba85f11861ade12874383 148 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 34.515 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D934_08875 24593ff9d7cba85f11861ade12874383 148 Pfam PF00436 Single-strand binding protein family 5 108 2.9E-38 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 D934_08875 24593ff9d7cba85f11861ade12874383 148 Gene3D G3DSA:2.40.50.140 1 126 2.4E-43 T 15-10-2018 D934_08875 24593ff9d7cba85f11861ade12874383 148 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 148 1.1E-43 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D934_12265 24593ff9d7cba85f11861ade12874383 148 PIRSF PIRSF002070 1 147 4.7E-33 T 15-10-2018 D934_12265 24593ff9d7cba85f11861ade12874383 148 SUPERFAMILY SSF50249 3 148 8.57E-51 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_12265 24593ff9d7cba85f11861ade12874383 148 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 34.515 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D934_12265 24593ff9d7cba85f11861ade12874383 148 Pfam PF00436 Single-strand binding protein family 5 108 2.9E-38 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 D934_12265 24593ff9d7cba85f11861ade12874383 148 Gene3D G3DSA:2.40.50.140 1 126 2.4E-43 T 15-10-2018 D934_12265 24593ff9d7cba85f11861ade12874383 148 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 148 1.1E-43 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D934_01040 81a7aff22e7eb47df3cea26478c9716f 1215 SUPERFAMILY SSF50998 731 1192 3.53E-9 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily D934_01040 81a7aff22e7eb47df3cea26478c9716f 1215 Pfam PF05567 Neisseria PilC beta-propeller domain 738 1040 3.8E-58 T 15-10-2018 IPR008707 PilC beta-propeller domain D934_02220 d0b2d2ec977397b1c95d10de9bb71afa 886 SUPERFAMILY SSF74778 20 179 1.22E-63 T 15-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D934_02220 d0b2d2ec977397b1c95d10de9bb71afa 886 Gene3D G3DSA:1.25.40.310 20 180 7.8E-64 T 15-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D934_02220 d0b2d2ec977397b1c95d10de9bb71afa 886 Gene3D G3DSA:3.30.499.10 428 555 2.5E-148 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 D934_02220 d0b2d2ec977397b1c95d10de9bb71afa 886 SUPERFAMILY SSF53732 398 879 8.11E-145 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 D934_02220 d0b2d2ec977397b1c95d10de9bb71afa 886 Gene3D G3DSA:3.40.1060.10 404 707 2.5E-148 T 15-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 D934_02220 d0b2d2ec977397b1c95d10de9bb71afa 886 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 20 877 0.0 T 15-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D934_02220 d0b2d2ec977397b1c95d10de9bb71afa 886 Gene3D G3DSA:3.30.499.10 709 885 3.7E-63 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 D934_02220 d0b2d2ec977397b1c95d10de9bb71afa 886 Pfam PF06434 Aconitate hydratase 2 N-terminus 187 401 9.7E-94 T 15-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D934_02220 d0b2d2ec977397b1c95d10de9bb71afa 886 ProSitePatterns PS00450 Aconitase family signature 1. 728 745 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 D934_02220 d0b2d2ec977397b1c95d10de9bb71afa 886 Pfam PF00330 Aconitase family (aconitate hydratase) 497 840 1.7E-38 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_02220 d0b2d2ec977397b1c95d10de9bb71afa 886 SUPERFAMILY SSF52016 181 391 8.04E-65 T 15-10-2018 D934_02220 d0b2d2ec977397b1c95d10de9bb71afa 886 Pfam PF11791 Aconitate B N-terminal domain 23 175 2.0E-60 T 15-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D934_02220 d0b2d2ec977397b1c95d10de9bb71afa 886 PIRSF PIRSF036687 18 884 0.0 T 15-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D934_02220 d0b2d2ec977397b1c95d10de9bb71afa 886 Gene3D G3DSA:3.20.19.10 181 380 2.2E-68 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 D934_12655 5704fc556ec44da66b1f8b53e057e5a8 370 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 362 3.2E-113 T 15-10-2018 IPR011757 Lytic transglycosylase MltB D934_12655 5704fc556ec44da66b1f8b53e057e5a8 370 Gene3D G3DSA:1.10.8.350 64 244 4.8E-98 T 15-10-2018 D934_12655 5704fc556ec44da66b1f8b53e057e5a8 370 Pfam PF13406 Transglycosylase SLT domain 59 360 1.4E-88 T 15-10-2018 IPR031304 Transglycosylase SLT domain 2 D934_12655 5704fc556ec44da66b1f8b53e057e5a8 370 Gene3D G3DSA:1.10.530.10 98 359 4.8E-98 T 15-10-2018 D934_12655 5704fc556ec44da66b1f8b53e057e5a8 370 SUPERFAMILY SSF53955 61 365 2.1E-80 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_03305 ae3e30820d0e6894aa4303bc0386766a 101 PRINTS PR00124 ATP synthase C subunit signature 57 82 5.7E-5 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03305 ae3e30820d0e6894aa4303bc0386766a 101 PRINTS PR00124 ATP synthase C subunit signature 19 38 5.7E-5 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03305 ae3e30820d0e6894aa4303bc0386766a 101 PRINTS PR00124 ATP synthase C subunit signature 40 55 5.7E-5 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03305 ae3e30820d0e6894aa4303bc0386766a 101 Pfam PF00137 ATP synthase subunit C 18 81 4.4E-8 T 15-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 D934_03305 ae3e30820d0e6894aa4303bc0386766a 101 ProSitePatterns PS00605 ATP synthase c subunit signature. 47 68 - T 15-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03305 ae3e30820d0e6894aa4303bc0386766a 101 SUPERFAMILY SSF81333 11 86 2.35E-17 T 15-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily D934_03305 ae3e30820d0e6894aa4303bc0386766a 101 Hamap MF_01396 ATP synthase subunit c [atpH]. 17 82 13.823 T 15-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03305 ae3e30820d0e6894aa4303bc0386766a 101 Gene3D G3DSA:1.20.20.10 10 85 3.2E-24 T 15-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03305 ae3e30820d0e6894aa4303bc0386766a 101 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 27 84 4.7E-23 T 15-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 D934_01895 10c5919066e46594598b778a9423d842 598 Pfam PF05960 Bacterial protein of unknown function (DUF885) 64 578 7.2E-147 T 15-10-2018 IPR010281 Protein of unknown function DUF885 D934_03995 6addb23aa9b3b90cb843c797d38ee2b7 396 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 154 392 4.9E-69 T 15-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria D934_03995 6addb23aa9b3b90cb843c797d38ee2b7 396 Pfam PF02405 Permease MlaE 180 388 7.5E-68 T 15-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 D934_10585 6e82053adaee377fe8d7964d4c53ebe8 237 SUPERFAMILY SSF52402 12 200 5.48E-59 T 15-10-2018 D934_10585 6e82053adaee377fe8d7964d4c53ebe8 237 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 1 235 39.775 T 15-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 D934_10585 6e82053adaee377fe8d7964d4c53ebe8 237 PIRSF PIRSF000857 8 237 2.2E-59 T 15-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 D934_10585 6e82053adaee377fe8d7964d4c53ebe8 237 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 40 212 5.9E-53 T 15-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 D934_10585 6e82053adaee377fe8d7964d4c53ebe8 237 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 13 234 9.1E-83 T 15-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 D934_10585 6e82053adaee377fe8d7964d4c53ebe8 237 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 25 235 1.7E-81 T 15-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 D934_10585 6e82053adaee377fe8d7964d4c53ebe8 237 Gene3D G3DSA:3.40.50.620 10 237 1.5E-67 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_08415 776f5336b0807f448435c11fe191e1d3 137 Gene3D G3DSA:3.90.20.10 29 124 4.8E-8 T 15-10-2018 D934_01395 885cf23861023860ab4115edc845ca9f 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 111 1.2E-24 T 15-10-2018 IPR006504 Transcriptional regulator Spx/MgsR D934_01395 885cf23861023860ab4115edc845ca9f 118 Pfam PF03960 ArsC family 7 113 7.5E-13 T 15-10-2018 IPR006660 Arsenate reductase-like D934_01395 885cf23861023860ab4115edc845ca9f 118 SUPERFAMILY SSF52833 1 114 2.62E-27 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_01395 885cf23861023860ab4115edc845ca9f 118 Gene3D G3DSA:3.40.30.10 1 115 5.0E-32 T 15-10-2018 D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 Pfam PF12836 Helix-hairpin-helix motif 495 559 7.7E-27 T 15-10-2018 D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 Gene3D G3DSA:1.10.3500.10 117 500 3.6E-150 T 15-10-2018 IPR023323 Tex-like domain superfamily D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 Gene3D G3DSA:1.10.150.310 503 634 4.5E-50 T 15-10-2018 D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 SUPERFAMILY SSF53098 325 473 4.02E-51 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 Pfam PF00575 S1 RNA binding domain 653 724 3.1E-18 T 15-10-2018 IPR003029 S1 domain GO:0003676 D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 Gene3D G3DSA:1.10.10.650 3 114 7.8E-38 T 15-10-2018 IPR023319 Tex-like protein, HTH domain superfamily D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 SUPERFAMILY SSF50249 642 730 9.7E-24 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 SUPERFAMILY SSF158832 5 324 4.71E-112 T 15-10-2018 D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 SUPERFAMILY SSF47781 565 636 4.89E-20 T 15-10-2018 IPR010994 RuvA domain 2-like D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 SMART SM00732 329 428 6.3E-38 T 15-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 Gene3D G3DSA:3.30.420.140 328 455 3.6E-150 T 15-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 Gene3D G3DSA:2.40.50.140 635 727 2.8E-26 T 15-10-2018 D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 SMART SM00316 653 724 8.0E-24 T 15-10-2018 IPR022967 RNA-binding domain, S1 D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 Pfam PF09371 Tex-like protein N-terminal domain 14 196 1.1E-64 T 15-10-2018 IPR018974 Tex-like protein, N-terminal D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 SUPERFAMILY SSF47781 474 561 8.45E-26 T 15-10-2018 IPR010994 RuvA domain 2-like D934_12585 79bcee77c47bcd9ae6b0423996c26ada 772 Pfam PF16921 Tex protein YqgF-like domain 330 455 2.3E-54 T 15-10-2018 IPR032639 Tex protein, YqgF-like domain D934_08225 72e3548c974846ac591b2739cb3fcbc8 287 Pfam PF01145 SPFH domain / Band 7 family 23 201 3.9E-25 T 15-10-2018 IPR001107 Band 7 domain D934_08225 72e3548c974846ac591b2739cb3fcbc8 287 SMART SM00244 19 184 3.7E-18 T 15-10-2018 IPR001107 Band 7 domain D934_08225 72e3548c974846ac591b2739cb3fcbc8 287 Gene3D G3DSA:3.30.479.30 48 187 1.3E-15 T 15-10-2018 D934_08225 72e3548c974846ac591b2739cb3fcbc8 287 SUPERFAMILY SSF117892 51 190 3.27E-19 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily D934_08225 72e3548c974846ac591b2739cb3fcbc8 287 PIRSF PIRSF005651 1 287 6.5E-78 T 15-10-2018 IPR010200 HflC GO:0016021|GO:0052547 D934_07375 9b27a9f04c835858c1832f37e48fbee1 107 Pfam PF03843 Outer membrane lipoprotein Slp family 2 105 3.5E-26 T 15-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 D934_07730 fd9a7fcc86f7e22d0f1bc1f0122851a3 319 Gene3D G3DSA:1.10.260.40 1 54 3.9E-8 T 15-10-2018 D934_07730 fd9a7fcc86f7e22d0f1bc1f0122851a3 319 SUPERFAMILY SSF51306 179 311 3.01E-20 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily D934_07730 fd9a7fcc86f7e22d0f1bc1f0122851a3 319 SUPERFAMILY SSF47413 1 53 2.82E-6 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_07730 fd9a7fcc86f7e22d0f1bc1f0122851a3 319 Pfam PF00717 Peptidase S24-like 222 284 1.3E-8 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D934_07730 fd9a7fcc86f7e22d0f1bc1f0122851a3 319 Gene3D G3DSA:1.10.260.40 66 132 4.5E-16 T 15-10-2018 D934_07730 fd9a7fcc86f7e22d0f1bc1f0122851a3 319 Gene3D G3DSA:2.10.109.10 182 314 1.6E-10 T 15-10-2018 D934_07730 fd9a7fcc86f7e22d0f1bc1f0122851a3 319 SMART SM00530 1 49 3.2 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_07730 fd9a7fcc86f7e22d0f1bc1f0122851a3 319 SMART SM00530 69 125 6.3E-12 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_07730 fd9a7fcc86f7e22d0f1bc1f0122851a3 319 SUPERFAMILY SSF47413 65 125 1.07E-11 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_07730 fd9a7fcc86f7e22d0f1bc1f0122851a3 319 Pfam PF01381 Helix-turn-helix 1 49 3.6E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_07730 fd9a7fcc86f7e22d0f1bc1f0122851a3 319 Pfam PF01381 Helix-turn-helix 70 125 3.6E-9 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_07625 69ff8e515baa14a2266e330f89eae789 530 SUPERFAMILY SSF117457 343 511 6.15E-62 T 15-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 D934_07625 69ff8e515baa14a2266e330f89eae789 530 Pfam PF05683 Fumarase C-terminus 314 513 1.9E-78 T 15-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 D934_07625 69ff8e515baa14a2266e330f89eae789 530 Gene3D G3DSA:3.20.130.10 332 512 4.8E-60 T 15-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 D934_07625 69ff8e515baa14a2266e330f89eae789 530 PIRSF PIRSF001394 18 530 7.4E-223 T 15-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 D934_07625 69ff8e515baa14a2266e330f89eae789 530 Pfam PF05681 Fumarate hydratase (Fumerase) 36 310 3.4E-97 T 15-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 D934_07625 69ff8e515baa14a2266e330f89eae789 530 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 37 310 1.6E-59 T 15-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 D934_07625 69ff8e515baa14a2266e330f89eae789 530 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 350 511 1.1E-48 T 15-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 D934_10485 efc6054be47a5f056d5623324ac482a4 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 15-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 D934_10485 efc6054be47a5f056d5623324ac482a4 405 Gene3D G3DSA:1.20.81.30 57 173 9.0E-24 T 15-10-2018 D934_10485 efc6054be47a5f056d5623324ac482a4 405 Pfam PF00482 Type II secretion system (T2SS), protein F 275 396 1.6E-25 T 15-10-2018 IPR018076 Type II secretion system F domain D934_10485 efc6054be47a5f056d5623324ac482a4 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 6.4E-29 T 15-10-2018 IPR018076 Type II secretion system F domain D934_10485 efc6054be47a5f056d5623324ac482a4 405 Gene3D G3DSA:1.20.81.30 260 366 1.2E-25 T 15-10-2018 D934_10485 efc6054be47a5f056d5623324ac482a4 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 9.7E-21 T 15-10-2018 IPR003004 GspF/PilC family D934_10485 efc6054be47a5f056d5623324ac482a4 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 9.7E-21 T 15-10-2018 IPR003004 GspF/PilC family D934_10485 efc6054be47a5f056d5623324ac482a4 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 9.7E-21 T 15-10-2018 IPR003004 GspF/PilC family D934_10485 efc6054be47a5f056d5623324ac482a4 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 9.7E-21 T 15-10-2018 IPR003004 GspF/PilC family D934_08525 85ee3c196ed6caa4c3e1fc157c7dba19 462 TIGRFAM TIGR01555 phge_rel_HI1409: phage-associated protein, HI1409 family 24 429 4.7E-198 T 15-10-2018 IPR006445 Phage-associated protein HI1409 D934_08525 85ee3c196ed6caa4c3e1fc157c7dba19 462 Pfam PF06381 Protein of unknown function (DUF1073) 55 404 2.9E-119 T 15-10-2018 IPR024459 Protein of unknown function DUF1073 D934_04105 719695582b70f989ef03c4b5a55dd063 226 SMART SM00478 55 210 5.9E-10 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 D934_04105 719695582b70f989ef03c4b5a55dd063 226 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 52 196 8.5E-17 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 D934_04105 719695582b70f989ef03c4b5a55dd063 226 Gene3D G3DSA:1.10.340.30 43 157 2.9E-54 T 15-10-2018 D934_04105 719695582b70f989ef03c4b5a55dd063 226 Gene3D G3DSA:1.10.1670.40 18 207 2.9E-54 T 15-10-2018 D934_04105 719695582b70f989ef03c4b5a55dd063 226 SUPERFAMILY SSF48150 39 208 2.62E-36 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 D934_03400 35295361adb967d73e6ccdc59d589a69 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 5 119 6.6E-34 T 15-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03400 35295361adb967d73e6ccdc59d589a69 119 Gene3D G3DSA:3.30.420.100 3 119 1.9E-35 T 15-10-2018 D934_03400 35295361adb967d73e6ccdc59d589a69 119 SUPERFAMILY SSF53137 5 117 1.85E-44 T 15-10-2018 D934_03400 35295361adb967d73e6ccdc59d589a69 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 119 2.2E-32 T 15-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03400 35295361adb967d73e6ccdc59d589a69 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 4 119 24.691 T 15-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_00265 c93d40654bf1a01920851195a6fdd60a 207 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 4 97 23.306 T 15-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 D934_00265 c93d40654bf1a01920851195a6fdd60a 207 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 178 1.5E-39 T 15-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 D934_00265 c93d40654bf1a01920851195a6fdd60a 207 Gene3D G3DSA:2.40.240.10 2 97 4.9E-32 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D934_00265 c93d40654bf1a01920851195a6fdd60a 207 Pfam PF01386 Ribosomal L25p family 6 94 8.5E-27 T 15-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 D934_00265 c93d40654bf1a01920851195a6fdd60a 207 Gene3D G3DSA:2.170.120.20 99 195 3.5E-26 T 15-10-2018 IPR037121 Ribosomal protein L25, C-terminal D934_00265 c93d40654bf1a01920851195a6fdd60a 207 SUPERFAMILY SSF50715 4 195 1.36E-54 T 15-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D934_00265 c93d40654bf1a01920851195a6fdd60a 207 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 186 6.8E-26 T 15-10-2018 IPR020057 Ribosomal protein L25, beta domain D934_00265 c93d40654bf1a01920851195a6fdd60a 207 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 188 30.568 T 15-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 D934_00265 c93d40654bf1a01920851195a6fdd60a 207 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 97 8.0E-50 T 15-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 D934_08080 a59534aec36f23833cec2941f229ca42 1242 Gene3D G3DSA:3.90.320.10 932 1241 2.8E-66 T 15-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal D934_08080 a59534aec36f23833cec2941f229ca42 1242 Pfam PF00580 UvrD/REP helicase N-terminal domain 13 486 3.7E-53 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 D934_08080 a59534aec36f23833cec2941f229ca42 1242 Gene3D G3DSA:1.10.486.10 640 783 1.2E-94 T 15-10-2018 D934_08080 a59534aec36f23833cec2941f229ca42 1242 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 4 1238 17.987 T 15-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 D934_08080 a59534aec36f23833cec2941f229ca42 1242 SUPERFAMILY SSF52980 943 1239 4.18E-55 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 D934_08080 a59534aec36f23833cec2941f229ca42 1242 SUPERFAMILY SSF52540 11 882 2.48E-94 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08080 a59534aec36f23833cec2941f229ca42 1242 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1128 1183 2.7E-5 T 15-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type D934_08080 a59534aec36f23833cec2941f229ca42 1242 Gene3D G3DSA:3.40.50.300 288 491 4.6E-28 T 15-10-2018 D934_08080 a59534aec36f23833cec2941f229ca42 1242 Gene3D G3DSA:3.40.50.300 497 887 1.2E-94 T 15-10-2018 D934_08080 a59534aec36f23833cec2941f229ca42 1242 Pfam PF13361 UvrD-like helicase C-terminal domain 785 880 8.2E-16 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 D934_08080 a59534aec36f23833cec2941f229ca42 1242 Pfam PF13361 UvrD-like helicase C-terminal domain 609 688 1.0E-6 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 D934_02655 59d2cf216c3ccd93ec26123d29ed72b3 863 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 49 850 2.9E-294 T 15-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 D934_02655 59d2cf216c3ccd93ec26123d29ed72b3 863 PIRSF PIRSF000437 47 862 0.0 T 15-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 D934_02655 59d2cf216c3ccd93ec26123d29ed72b3 863 PIRSF PIRSF500064 30 862 0.0 T 15-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 D934_02655 59d2cf216c3ccd93ec26123d29ed72b3 863 Pfam PF01553 Acyltransferase 330 462 9.7E-22 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D934_02655 59d2cf216c3ccd93ec26123d29ed72b3 863 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 38 854 30.539 T 15-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 D934_02655 59d2cf216c3ccd93ec26123d29ed72b3 863 SUPERFAMILY SSF69593 297 520 9.42E-27 T 15-10-2018 D934_02655 59d2cf216c3ccd93ec26123d29ed72b3 863 SMART SM00563 338 465 5.1E-26 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D934_12225 8e1376f1576a07823ad18b8b0389aa37 159 Pfam PF07603 Protein of unknown function (DUF1566) 35 143 2.3E-12 T 15-10-2018 IPR011460 Protein of unknown function DUF1566 D934_10095 fb90e88a0201e0d69ee66669d228e2a5 367 Gene3D G3DSA:2.40.30.170 44 278 1.2E-57 T 15-10-2018 D934_10095 fb90e88a0201e0d69ee66669d228e2a5 367 Gene3D G3DSA:1.10.287.470 92 164 1.2E-57 T 15-10-2018 D934_10095 fb90e88a0201e0d69ee66669d228e2a5 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 259 4.5E-13 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D934_10095 fb90e88a0201e0d69ee66669d228e2a5 367 SUPERFAMILY SSF111369 48 215 2.22E-19 T 15-10-2018 D934_10095 fb90e88a0201e0d69ee66669d228e2a5 367 Gene3D G3DSA:2.40.50.100 58 204 1.2E-57 T 15-10-2018 D934_10095 fb90e88a0201e0d69ee66669d228e2a5 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 354 1.3E-59 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D934_10095 fb90e88a0201e0d69ee66669d228e2a5 367 Gene3D G3DSA:2.40.420.20 37 350 1.2E-57 T 15-10-2018 D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 Pfam PF00549 CoA-ligase 152 270 9.8E-19 T 15-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 286 3.6E-138 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 Pfam PF02629 CoA binding domain 6 99 3.2E-31 T 15-10-2018 IPR003781 CoA-binding GO:0048037 D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 15-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 SUPERFAMILY SSF51735 1 123 1.62E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 Gene3D G3DSA:3.40.50.261 125 289 1.3E-71 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 289 43.229 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 Gene3D G3DSA:3.40.50.720 2 124 3.7E-52 T 15-10-2018 D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 PIRSF PIRSF001553 1 290 4.3E-130 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 153 182 - T 15-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 SUPERFAMILY SSF52210 124 290 2.88E-56 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 SMART SM00881 4 100 1.3E-35 T 15-10-2018 IPR003781 CoA-binding GO:0048037 D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 PRINTS PR01798 Succinyl-CoA synthase signature 178 196 3.1E-35 T 15-10-2018 D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 3.1E-35 T 15-10-2018 D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 3.1E-35 T 15-10-2018 D934_13510 566d2995d67be5a5717ea556bd4d1fed 290 PRINTS PR01798 Succinyl-CoA synthase signature 209 222 3.1E-35 T 15-10-2018 D934_01910 4b0d4d2d22c951c1391ddb92b3db91b9 614 Pfam PF13721 SecD export protein N-terminal TM region 3 102 5.3E-30 T 15-10-2018 IPR027398 SecD export protein N-terminal TM domain D934_01910 4b0d4d2d22c951c1391ddb92b3db91b9 614 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 613 43.681 T 15-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 D934_01910 4b0d4d2d22c951c1391ddb92b3db91b9 614 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 598 5.7E-121 T 15-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 D934_01910 4b0d4d2d22c951c1391ddb92b3db91b9 614 Pfam PF07549 SecD/SecF GG Motif 115 140 6.9E-6 T 15-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site D934_01910 4b0d4d2d22c951c1391ddb92b3db91b9 614 Gene3D G3DSA:3.30.1360.200 276 430 4.4E-41 T 15-10-2018 D934_01910 4b0d4d2d22c951c1391ddb92b3db91b9 614 Gene3D G3DSA:1.20.1640.10 435 611 8.9E-15 T 15-10-2018 D934_01910 4b0d4d2d22c951c1391ddb92b3db91b9 614 Gene3D G3DSA:3.30.70.3400 217 434 4.4E-41 T 15-10-2018 D934_01910 4b0d4d2d22c951c1391ddb92b3db91b9 614 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 370 592 1.5E-62 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D934_01910 4b0d4d2d22c951c1391ddb92b3db91b9 614 Pfam PF02355 Protein export membrane protein 435 600 1.3E-20 T 15-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial D934_01910 4b0d4d2d22c951c1391ddb92b3db91b9 614 SUPERFAMILY SSF82866 407 605 8.89E-41 T 15-10-2018 D934_01910 4b0d4d2d22c951c1391ddb92b3db91b9 614 Gene3D G3DSA:3.30.70.260 26 105 1.2E-5 T 15-10-2018 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 SUPERFAMILY SSF54826 4 136 5.08E-52 T 15-10-2018 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 ProSitePatterns PS00164 Enolase signature. 336 349 - T 15-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 Hamap MF_00318 Enolase [eno]. 2 413 43.409 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 SUPERFAMILY SSF51604 141 427 4.81E-121 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 Pfam PF03952 Enolase, N-terminal domain 4 134 6.7E-55 T 15-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 Gene3D G3DSA:3.30.390.10 1 126 6.6E-52 T 15-10-2018 IPR029017 Enolase-like, N-terminal D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 SMART SM01193 4 134 3.0E-84 T 15-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 PRINTS PR00148 Enolase signature 37 51 3.5E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 PRINTS PR00148 Enolase signature 163 176 3.5E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 PRINTS PR00148 Enolase signature 107 123 3.5E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 PRINTS PR00148 Enolase signature 365 382 3.5E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 PRINTS PR00148 Enolase signature 313 324 3.5E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 PRINTS PR00148 Enolase signature 336 350 3.5E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 SMART SM01192 141 427 2.3E-208 T 15-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 2.8E-196 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 425 7.7E-127 T 15-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 PIRSF PIRSF001400 1 427 3.7E-179 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D934_03935 f80af96ed1a3237a9d0c79329a5537c1 430 Gene3D G3DSA:3.20.20.120 128 430 3.3E-126 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily D934_10935 41cca98ac8f220737c07e880c116b557 373 Pfam PF01842 ACT domain 300 343 2.1E-6 T 15-10-2018 IPR002912 ACT domain D934_10935 41cca98ac8f220737c07e880c116b557 373 Gene3D G3DSA:1.10.3660.10 161 274 8.6E-12 T 15-10-2018 D934_10935 41cca98ac8f220737c07e880c116b557 373 SUPERFAMILY SSF55021 297 360 2.47E-8 T 15-10-2018 D934_10935 41cca98ac8f220737c07e880c116b557 373 SUPERFAMILY SSF51735 7 151 1.47E-22 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_10935 41cca98ac8f220737c07e880c116b557 373 SUPERFAMILY SSF48179 154 251 7.82E-18 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D934_10935 41cca98ac8f220737c07e880c116b557 373 Gene3D G3DSA:3.40.50.720 2 159 8.7E-28 T 15-10-2018 D934_10935 41cca98ac8f220737c07e880c116b557 373 Gene3D G3DSA:3.30.70.260 296 365 4.7E-8 T 15-10-2018 D934_10935 41cca98ac8f220737c07e880c116b557 373 Pfam PF02153 Prephenate dehydrogenase 46 251 1.0E-24 T 15-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 D934_10650 316642d80e1642fdc5b52b5d0ef78760 256 Gene3D G3DSA:3.40.50.300 169 254 1.2E-5 T 15-10-2018 D934_13450 29669aae9b6a3c7426043979f9da944a 445 Gene3D G3DSA:3.30.565.10 304 444 2.8E-24 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_13450 29669aae9b6a3c7426043979f9da944a 445 Gene3D G3DSA:1.10.287.130 185 302 3.1E-20 T 15-10-2018 D934_13450 29669aae9b6a3c7426043979f9da944a 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 8.1E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_13450 29669aae9b6a3c7426043979f9da944a 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 8.1E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_13450 29669aae9b6a3c7426043979f9da944a 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 432 1.7E-14 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_13450 29669aae9b6a3c7426043979f9da944a 445 SMART SM00388 236 302 4.9E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_13450 29669aae9b6a3c7426043979f9da944a 445 SUPERFAMILY SSF47384 219 302 2.75E-17 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D934_13450 29669aae9b6a3c7426043979f9da944a 445 SUPERFAMILY SSF55874 306 443 1.18E-25 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_13450 29669aae9b6a3c7426043979f9da944a 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 302 4.6E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_13450 29669aae9b6a3c7426043979f9da944a 445 SMART SM00387 342 445 1.5E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_04130 b3b3d1582416ba451fe137c095807448 387 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 17 346 9.4E-30 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 D934_04130 b3b3d1582416ba451fe137c095807448 387 Gene3D G3DSA:3.40.50.150 1 209 1.5E-38 T 15-10-2018 D934_04130 b3b3d1582416ba451fe137c095807448 387 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 123 137 1.8E-11 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 D934_04130 b3b3d1582416ba451fe137c095807448 387 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 164 177 1.8E-11 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 D934_04130 b3b3d1582416ba451fe137c095807448 387 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 15 31 1.8E-11 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 D934_04130 b3b3d1582416ba451fe137c095807448 387 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 328 346 - T 15-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 D934_04130 b3b3d1582416ba451fe137c095807448 387 Gene3D G3DSA:3.90.120.10 211 339 2.4E-26 T 15-10-2018 D934_04130 b3b3d1582416ba451fe137c095807448 387 Pfam PF00145 C-5 cytosine-specific DNA methylase 17 347 1.8E-47 T 15-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 D934_04130 b3b3d1582416ba451fe137c095807448 387 SUPERFAMILY SSF53335 17 348 8.85E-75 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_10910 f229c23562df1bb3b2ceb9b9519b148d 188 Gene3D G3DSA:3.40.430.10 23 188 3.8E-49 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 D934_10910 f229c23562df1bb3b2ceb9b9519b148d 188 Pfam PF00186 Dihydrofolate reductase 25 185 2.5E-50 T 15-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 D934_10910 f229c23562df1bb3b2ceb9b9519b148d 188 PIRSF PIRSF000194 19 188 3.7E-53 T 15-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 D934_10910 f229c23562df1bb3b2ceb9b9519b148d 188 PRINTS PR00070 Dihydrofolate reductase signature 116 130 3.0E-11 T 15-10-2018 D934_10910 f229c23562df1bb3b2ceb9b9519b148d 188 PRINTS PR00070 Dihydrofolate reductase signature 50 58 3.0E-11 T 15-10-2018 D934_10910 f229c23562df1bb3b2ceb9b9519b148d 188 PRINTS PR00070 Dihydrofolate reductase signature 36 46 3.0E-11 T 15-10-2018 D934_10910 f229c23562df1bb3b2ceb9b9519b148d 188 PRINTS PR00070 Dihydrofolate reductase signature 63 74 3.0E-11 T 15-10-2018 D934_10910 f229c23562df1bb3b2ceb9b9519b148d 188 SUPERFAMILY SSF53597 23 186 2.23E-48 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 D934_10910 f229c23562df1bb3b2ceb9b9519b148d 188 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 36 58 - T 15-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 342 3.6E-83 T 15-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 485 8.1E-35 T 15-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 SUPERFAMILY SSF64484 16 1363 0.0 T 15-10-2018 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 Gene3D G3DSA:1.10.1790.20 1136 1314 1.5E-62 T 15-10-2018 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 Gene3D G3DSA:1.10.132.30 641 790 4.8E-62 T 15-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 Gene3D G3DSA:1.10.150.390 1316 1374 1.2E-27 T 15-10-2018 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 4.7E-77 T 15-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 Gene3D G3DSA:2.40.50.100 1024 1127 8.4E-27 T 15-10-2018 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 Gene3D G3DSA:2.40.50.100 949 1023 3.3E-27 T 15-10-2018 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 Gene3D G3DSA:1.10.274.100 490 640 2.5E-41 T 15-10-2018 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 3.3E-18 T 15-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 SMART SM00663 235 514 2.1E-179 T 15-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 Gene3D G3DSA:1.10.40.90 374 416 7.8E-22 T 15-10-2018 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 15-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 Gene3D G3DSA:2.40.50.100 1152 1215 1.5E-62 T 15-10-2018 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1380 18.699 T 15-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00185 a277bcbeab2df60f4c8553b73231e5cc 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.8E-28 T 15-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 Gene3D G3DSA:3.40.120.10 570 688 4.5E-37 T 15-10-2018 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 SUPERFAMILY SSF53738 324 458 8.24E-31 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 Gene3D G3DSA:3.40.120.10 492 569 2.2E-18 T 15-10-2018 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 731 775 3.5E-6 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 Gene3D G3DSA:3.30.310.50 697 786 7.1E-15 T 15-10-2018 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 417 431 3.4E-9 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 490 509 3.4E-9 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 553 568 3.4E-9 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 SUPERFAMILY SSF55957 689 782 9.42E-14 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 578 689 8.2E-20 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 SUPERFAMILY SSF53738 579 684 3.45E-29 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 SUPERFAMILY SSF53738 473 575 9.81E-22 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 329 458 1.2E-32 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 Gene3D G3DSA:3.40.120.10 320 471 2.1E-41 T 15-10-2018 D934_01580 8baba80500b07f5cfe4f53d474dd9a06 787 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 476 573 4.5E-17 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_00655 68e68a2df687193fee23c1f5dc7ea2cd 405 PIRSF PIRSF028408 1 399 6.3E-144 T 15-10-2018 IPR014544 Uncharacterised conserved protein UCP028408 D934_00655 68e68a2df687193fee23c1f5dc7ea2cd 405 Pfam PF11795 Uncharacterized protein conserved in bacteria N-term (DUF3322) 6 188 4.3E-57 T 15-10-2018 IPR024537 Domain of unknown function DUF3322 D934_00655 68e68a2df687193fee23c1f5dc7ea2cd 405 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 211 389 7.3E-62 T 15-10-2018 IPR024534 Domain of unknown function DUF2220 D934_08285 4ef01d0d23ba62acbac6b2153ae2321d 379 Gene3D G3DSA:3.40.50.720 112 363 9.5E-90 T 15-10-2018 D934_08285 4ef01d0d23ba62acbac6b2153ae2321d 379 Pfam PF00899 ThiF family 119 356 1.1E-66 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 D934_08285 4ef01d0d23ba62acbac6b2153ae2321d 379 SMART SM00450 6 102 6.2E-9 T 15-10-2018 IPR001763 Rhodanese-like domain D934_08285 4ef01d0d23ba62acbac6b2153ae2321d 379 Pfam PF00581 Rhodanese-like domain 8 98 5.5E-7 T 15-10-2018 IPR001763 Rhodanese-like domain D934_08285 4ef01d0d23ba62acbac6b2153ae2321d 379 SUPERFAMILY SSF52821 2 105 1.57E-24 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily D934_08285 4ef01d0d23ba62acbac6b2153ae2321d 379 Gene3D G3DSA:3.40.250.10 4 105 3.8E-21 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily D934_08285 4ef01d0d23ba62acbac6b2153ae2321d 379 SUPERFAMILY SSF69572 114 361 3.4E-89 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 D934_12865 dde351cc92fafe7cd5a8490c866521d2 235 SUPERFAMILY SSF161098 24 220 4.97E-42 T 15-10-2018 IPR035906 MetI-like superfamily D934_12865 dde351cc92fafe7cd5a8490c866521d2 235 Gene3D G3DSA:1.10.3720.10 24 234 2.6E-46 T 15-10-2018 IPR035906 MetI-like superfamily D934_12865 dde351cc92fafe7cd5a8490c866521d2 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 235 6.8E-24 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 Gene3D G3DSA:3.40.190.80 140 268 2.4E-34 T 15-10-2018 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 SUPERFAMILY SSF56655 4 262 5.76E-79 T 15-10-2018 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 3.3E-55 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 3.3E-55 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 3.3E-55 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 3.3E-55 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 3.3E-55 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 3.3E-55 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 15-10-2018 IPR020583 Inositol monophosphatase, metal-binding site D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 15-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 Pfam PF00459 Inositol monophosphatase family 4 251 1.1E-62 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 2.6E-17 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 2.6E-17 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 2.6E-17 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 2.6E-17 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 D934_11555 2ddfb856d24f567b9358de90f0a6137c 275 Gene3D G3DSA:3.30.540.10 1 139 4.3E-46 T 15-10-2018 D934_12965 48b73a3d00300eb8c1f7e3f0c591049c 435 Gene3D G3DSA:3.50.50.60 105 400 3.4E-52 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_12965 48b73a3d00300eb8c1f7e3f0c591049c 435 Pfam PF01266 FAD dependent oxidoreductase 3 398 1.1E-70 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 D934_12965 48b73a3d00300eb8c1f7e3f0c591049c 435 Gene3D G3DSA:3.30.9.10 134 362 3.4E-52 T 15-10-2018 D934_12965 48b73a3d00300eb8c1f7e3f0c591049c 435 SUPERFAMILY SSF54373 270 360 3.79E-16 T 15-10-2018 D934_12965 48b73a3d00300eb8c1f7e3f0c591049c 435 Gene3D G3DSA:3.50.50.60 1 78 1.3E-9 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_12965 48b73a3d00300eb8c1f7e3f0c591049c 435 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 46.656 T 15-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 D934_12965 48b73a3d00300eb8c1f7e3f0c591049c 435 SUPERFAMILY SSF51905 1 416 8.8E-52 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_00910 269d48511a0cb00282a8dac1612ab7ad 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 46 8.2E-26 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_00910 269d48511a0cb00282a8dac1612ab7ad 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 16.576 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_00910 269d48511a0cb00282a8dac1612ab7ad 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 15-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_00910 269d48511a0cb00282a8dac1612ab7ad 46 Pfam PF00468 Ribosomal protein L34 3 46 7.8E-26 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_00910 269d48511a0cb00282a8dac1612ab7ad 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 28 7.0E-8 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_02010 d54ed656aa438664ed6101188ad560b3 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 27 346 4.3E-86 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D934_02010 d54ed656aa438664ed6101188ad560b3 360 Pfam PF13533 Biotin-lipoyl like 59 98 5.8E-8 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D934_02010 d54ed656aa438664ed6101188ad560b3 360 Gene3D G3DSA:2.40.30.170 36 271 1.1E-56 T 15-10-2018 D934_02010 d54ed656aa438664ed6101188ad560b3 360 Gene3D G3DSA:2.40.50.100 50 196 1.1E-56 T 15-10-2018 D934_02010 d54ed656aa438664ed6101188ad560b3 360 Gene3D G3DSA:1.10.287.470 84 157 1.1E-56 T 15-10-2018 D934_02010 d54ed656aa438664ed6101188ad560b3 360 Pfam PF13437 HlyD family secretion protein 162 261 7.2E-6 T 15-10-2018 D934_02010 d54ed656aa438664ed6101188ad560b3 360 SUPERFAMILY SSF111369 40 170 3.79E-10 T 15-10-2018 D934_02010 d54ed656aa438664ed6101188ad560b3 360 Gene3D G3DSA:2.40.420.20 30 345 1.1E-56 T 15-10-2018 D934_10995 a354f25db5006dcea7219bdb3c4d4569 67 PIRSF PIRSF002599 1 67 1.3E-23 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 D934_10995 a354f25db5006dcea7219bdb3c4d4569 67 Gene3D G3DSA:2.40.50.140 1 65 1.2E-28 T 15-10-2018 D934_10995 a354f25db5006dcea7219bdb3c4d4569 67 PRINTS PR00050 Cold shock protein signature 4 19 6.4E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D934_10995 a354f25db5006dcea7219bdb3c4d4569 67 PRINTS PR00050 Cold shock protein signature 25 34 6.4E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D934_10995 a354f25db5006dcea7219bdb3c4d4569 67 PRINTS PR00050 Cold shock protein signature 40 58 6.4E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D934_10995 a354f25db5006dcea7219bdb3c4d4569 67 SMART SM00357 3 67 7.2E-29 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 D934_10995 a354f25db5006dcea7219bdb3c4d4569 67 SUPERFAMILY SSF50249 1 66 1.25E-24 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_10995 a354f25db5006dcea7219bdb3c4d4569 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 15-10-2018 IPR019844 Cold-shock conserved site D934_10995 a354f25db5006dcea7219bdb3c4d4569 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.4E-29 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D934_09430 8875ec805039daf834294f905557d32b 217 Gene3D G3DSA:3.20.20.70 7 211 1.5E-36 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_09430 8875ec805039daf834294f905557d32b 217 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 217 2.6E-108 T 15-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE D934_09430 8875ec805039daf834294f905557d32b 217 PIRSF PIRSF000370 6 217 2.3E-66 T 15-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 D934_09430 8875ec805039daf834294f905557d32b 217 Pfam PF04055 Radical SAM superfamily 31 121 7.1E-17 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D934_09430 8875ec805039daf834294f905557d32b 217 Pfam PF13394 4Fe-4S single cluster domain 29 110 2.1E-10 T 15-10-2018 D934_09430 8875ec805039daf834294f905557d32b 217 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 8 214 35.82 T 15-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 D934_09430 8875ec805039daf834294f905557d32b 217 SUPERFAMILY SSF102114 31 107 3.27E-16 T 15-10-2018 D934_05790 efe36a21fb3d8d4cf588a07c0fcdc896 462 Gene3D G3DSA:3.30.43.10 1 92 7.7E-24 T 15-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 D934_05790 efe36a21fb3d8d4cf588a07c0fcdc896 462 Pfam PF01565 FAD binding domain 40 178 3.5E-41 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 D934_05790 efe36a21fb3d8d4cf588a07c0fcdc896 462 Gene3D G3DSA:3.30.465.10 94 214 4.0E-41 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D934_05790 efe36a21fb3d8d4cf588a07c0fcdc896 462 SUPERFAMILY SSF56176 4 216 1.26E-66 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D934_05790 efe36a21fb3d8d4cf588a07c0fcdc896 462 Gene3D G3DSA:3.30.70.2190 216 331 8.1E-24 T 15-10-2018 D934_05790 efe36a21fb3d8d4cf588a07c0fcdc896 462 Gene3D G3DSA:1.10.45.10 420 460 3.4E-15 T 15-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 D934_05790 efe36a21fb3d8d4cf588a07c0fcdc896 462 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 459 2.3E-53 T 15-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 D934_05790 efe36a21fb3d8d4cf588a07c0fcdc896 462 SUPERFAMILY SSF55103 189 461 6.05E-54 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 D934_05790 efe36a21fb3d8d4cf588a07c0fcdc896 462 Gene3D G3DSA:3.30.70.2740 334 419 2.0E-24 T 15-10-2018 D934_07695 07e364d5a1fc70efc32b14ad3492a4b6 156 Pfam PF07603 Protein of unknown function (DUF1566) 30 140 9.2E-15 T 15-10-2018 IPR011460 Protein of unknown function DUF1566 D934_08915 07e364d5a1fc70efc32b14ad3492a4b6 156 Pfam PF07603 Protein of unknown function (DUF1566) 30 140 9.2E-15 T 15-10-2018 IPR011460 Protein of unknown function DUF1566 D934_08825 efb2d5976ad1fce1ba171ededadadf23 552 Pfam PF08019 Domain of unknown function (DUF1705) 69 217 3.0E-45 T 15-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 D934_08825 efb2d5976ad1fce1ba171ededadadf23 552 SUPERFAMILY SSF53649 244 536 2.62E-16 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D934_08825 efb2d5976ad1fce1ba171ededadadf23 552 Pfam PF00884 Sulfatase 247 534 2.4E-52 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 D934_08825 efb2d5976ad1fce1ba171ededadadf23 552 Gene3D G3DSA:3.40.720.10 231 552 4.7E-82 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D934_06475 65518f94caf39fb973666a96b3b31afb 553 SUPERFAMILY SSF52980 1 154 6.43E-20 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 D934_06475 65518f94caf39fb973666a96b3b31afb 553 Gene3D G3DSA:3.90.320.10 6 196 3.0E-19 T 15-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal D934_06475 65518f94caf39fb973666a96b3b31afb 553 PIRSF PIRSF028503 1 553 0.0 T 15-10-2018 IPR016889 Uncharacterised conserved protein UCP028503 D934_06475 65518f94caf39fb973666a96b3b31afb 553 Pfam PF09588 YqaJ-like viral recombinase domain 12 147 1.8E-10 T 15-10-2018 IPR019080 YqaJ viral recombinase D934_06475 65518f94caf39fb973666a96b3b31afb 553 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 6 153 9.4E-21 T 15-10-2018 IPR017482 Putative phage-type endonuclease D934_04070 7b5db00045a0ebcba1a86e5a8dbd0511 269 SUPERFAMILY SSF52540 4 267 2.31E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04070 7b5db00045a0ebcba1a86e5a8dbd0511 269 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 226 1.5E-22 T 15-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain D934_04070 7b5db00045a0ebcba1a86e5a8dbd0511 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 267 1.6E-112 T 15-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 D934_04070 7b5db00045a0ebcba1a86e5a8dbd0511 269 Gene3D G3DSA:3.40.50.300 1 259 2.8E-66 T 15-10-2018 D934_04070 7b5db00045a0ebcba1a86e5a8dbd0511 269 PIRSF PIRSF003092 1 269 4.3E-91 T 15-10-2018 IPR025501 ATP binding protein MinD D934_02765 63d1b7a313fa921a68c4e5b761dac01d 243 Gene3D G3DSA:3.40.1160.10 2 242 8.8E-78 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D934_02765 63d1b7a313fa921a68c4e5b761dac01d 243 PIRSF PIRSF005650 1 243 1.8E-93 T 15-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 D934_02765 63d1b7a313fa921a68c4e5b761dac01d 243 SUPERFAMILY SSF53633 5 236 2.88E-71 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D934_02765 63d1b7a313fa921a68c4e5b761dac01d 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 2.5E-98 T 15-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 D934_02765 63d1b7a313fa921a68c4e5b761dac01d 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 44.592 T 15-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 D934_02765 63d1b7a313fa921a68c4e5b761dac01d 243 Pfam PF00696 Amino acid kinase family 8 216 6.8E-28 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D934_11880 0ef18d56506c4663ead6299fdcbb137d 230 SMART SM00702 1 181 7.7E-31 T 15-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 D934_11880 0ef18d56506c4663ead6299fdcbb137d 230 SUPERFAMILY SSF51197 77 182 9.34E-5 T 15-10-2018 D934_11880 0ef18d56506c4663ead6299fdcbb137d 230 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 230 44.983 T 15-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 D934_11880 0ef18d56506c4663ead6299fdcbb137d 230 Gene3D G3DSA:2.60.120.620 1 182 2.0E-43 T 15-10-2018 D934_11880 0ef18d56506c4663ead6299fdcbb137d 230 Gene3D G3DSA:4.10.860.20 184 230 1.1E-17 T 15-10-2018 D934_11880 0ef18d56506c4663ead6299fdcbb137d 230 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 180 4.9E-14 T 15-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 D934_05575 092d2edd17db368b5a2d49e51e7f4530 126 Gene3D G3DSA:1.10.260.40 6 75 1.7E-12 T 15-10-2018 D934_05575 092d2edd17db368b5a2d49e51e7f4530 126 Pfam PF01381 Helix-turn-helix 13 66 3.1E-9 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_05575 092d2edd17db368b5a2d49e51e7f4530 126 SMART SM00530 12 71 2.2E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_05575 092d2edd17db368b5a2d49e51e7f4530 126 SUPERFAMILY SSF47413 8 62 5.38E-10 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 Gene3D G3DSA:1.10.3210.10 25 210 1.3E-73 T 15-10-2018 D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 SUPERFAMILY SSF81271 395 467 9.65E-20 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 SMART SM00471 61 173 4.1E-11 T 15-10-2018 IPR003607 HD/PDEase domain D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 SUPERFAMILY SSF109604 25 211 9.73E-70 T 15-10-2018 D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 Pfam PF02824 TGS domain 408 467 6.1E-17 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 Gene3D G3DSA:3.30.460.10 214 345 6.6E-41 T 15-10-2018 D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 SUPERFAMILY SSF81301 201 412 1.16E-57 T 15-10-2018 D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 SMART SM00954 255 365 3.2E-56 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 Gene3D G3DSA:3.30.70.260 646 723 8.1E-14 T 15-10-2018 D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 Pfam PF13328 HD domain 47 195 2.2E-49 T 15-10-2018 IPR003607 HD/PDEase domain D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 Pfam PF13291 ACT domain 646 722 1.7E-18 T 15-10-2018 IPR002912 ACT domain D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 48 721 2.9E-224 T 15-10-2018 IPR004811 RelA/SpoT family GO:0015969 D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 Gene3D G3DSA:3.10.20.30 401 474 5.8E-28 T 15-10-2018 IPR012675 Beta-grasp domain superfamily D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 Pfam PF04607 Region found in RelA / SpoT proteins 255 364 2.1E-33 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 D934_08730 d5a3be3eb84bc509c0e76b67e8398991 723 SUPERFAMILY SSF55021 651 722 1.22E-8 T 15-10-2018 D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 583 634 8.9E-14 T 15-10-2018 D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 60 189 3.0E-18 T 15-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 Gene3D G3DSA:3.30.379.10 60 191 7.1E-155 T 15-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 SUPERFAMILY SSF51445 192 545 5.9E-118 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 Gene3D G3DSA:3.20.20.80 192 553 7.1E-155 T 15-10-2018 D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 215 236 1.5E-41 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 282 299 1.5E-41 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 149 169 1.5E-41 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 352 365 1.5E-41 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 514 531 1.5E-41 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 330 348 1.5E-41 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 496 512 1.5E-41 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 PRINTS PR00738 Glycosyl hydrolase family 20 signature 186 203 1.5E-41 T 15-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 192 532 2.1E-114 T 15-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 D934_12980 54aa7b0e83f189914b135187a7a3c3ad 812 SUPERFAMILY SSF55545 51 191 1.13E-23 T 15-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 D934_04885 2dc915acdb19f966c04abc04e65cfd1c 636 Pfam PF01841 Transglutaminase-like superfamily 261 335 2.1E-8 T 15-10-2018 IPR002931 Transglutaminase-like D934_04885 2dc915acdb19f966c04abc04e65cfd1c 636 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 47 213 6.5E-36 T 15-10-2018 IPR024618 Domain of unknown function DUF3857 D934_04885 2dc915acdb19f966c04abc04e65cfd1c 636 SUPERFAMILY SSF54001 257 365 4.12E-10 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily D934_04885 2dc915acdb19f966c04abc04e65cfd1c 636 Gene3D G3DSA:2.60.40.3140 29 237 1.8E-37 T 15-10-2018 D934_04885 2dc915acdb19f966c04abc04e65cfd1c 636 Gene3D G3DSA:3.10.620.30 247 386 3.3E-30 T 15-10-2018 D934_04895 4f6144e4dbab573a5103bbfaf3e21e12 455 Gene3D G3DSA:1.10.8.60 172 244 1.5E-17 T 15-10-2018 D934_04895 4f6144e4dbab573a5103bbfaf3e21e12 455 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 25 145 8.9E-14 T 15-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 D934_04895 4f6144e4dbab573a5103bbfaf3e21e12 455 Pfam PF12002 MgsA AAA+ ATPase C terminal 273 438 2.0E-61 T 15-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal D934_04895 4f6144e4dbab573a5103bbfaf3e21e12 455 SUPERFAMILY SSF52540 20 241 2.12E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04895 4f6144e4dbab573a5103bbfaf3e21e12 455 SMART SM00382 56 172 3.6E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_04895 4f6144e4dbab573a5103bbfaf3e21e12 455 Pfam PF16193 AAA C-terminal domain 195 271 3.7E-23 T 15-10-2018 IPR032423 AAA C-terminal domain D934_04895 4f6144e4dbab573a5103bbfaf3e21e12 455 Gene3D G3DSA:1.10.3710.10 350 451 1.0E-30 T 15-10-2018 D934_04895 4f6144e4dbab573a5103bbfaf3e21e12 455 SUPERFAMILY SSF48019 256 438 6.23E-69 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 D934_04895 4f6144e4dbab573a5103bbfaf3e21e12 455 Gene3D G3DSA:3.40.50.300 18 170 1.9E-42 T 15-10-2018 D934_04895 4f6144e4dbab573a5103bbfaf3e21e12 455 Gene3D G3DSA:1.20.272.10 246 349 7.3E-40 T 15-10-2018 D934_13195 4aeb9999577cda9178ee24c7131ca4b7 492 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 482 33.943 T 15-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 D934_13195 4aeb9999577cda9178ee24c7131ca4b7 492 SUPERFAMILY SSF53623 96 328 3.79E-74 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D934_13195 4aeb9999577cda9178ee24c7131ca4b7 492 Gene3D G3DSA:3.40.1190.10 96 332 2.4E-78 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D934_13195 4aeb9999577cda9178ee24c7131ca4b7 492 Pfam PF08245 Mur ligase middle domain 105 308 6.4E-47 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D934_13195 4aeb9999577cda9178ee24c7131ca4b7 492 Gene3D G3DSA:3.90.190.20 337 491 2.1E-54 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D934_13195 4aeb9999577cda9178ee24c7131ca4b7 492 SUPERFAMILY SSF63418 3 96 8.5E-18 T 15-10-2018 IPR035911 MurE/MurF, N-terminal D934_13195 4aeb9999577cda9178ee24c7131ca4b7 492 Pfam PF01225 Mur ligase family, catalytic domain 18 93 2.5E-8 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 D934_13195 4aeb9999577cda9178ee24c7131ca4b7 492 Gene3D G3DSA:3.40.1390.10 3 95 2.1E-17 T 15-10-2018 D934_13195 4aeb9999577cda9178ee24c7131ca4b7 492 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 16 482 2.0E-148 T 15-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 D934_13195 4aeb9999577cda9178ee24c7131ca4b7 492 Pfam PF02875 Mur ligase family, glutamate ligase domain 330 412 2.9E-18 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 D934_13195 4aeb9999577cda9178ee24c7131ca4b7 492 SUPERFAMILY SSF53244 329 483 7.2E-46 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D934_04030 b8eed6ea37d5734a15df4d1f2e3ea41c 161 PIRSF PIRSF018472 1 160 2.6E-45 T 15-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type D934_04030 b8eed6ea37d5734a15df4d1f2e3ea41c 161 Pfam PF04093 rod shape-determining protein MreD 3 152 6.6E-38 T 15-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 D934_04030 b8eed6ea37d5734a15df4d1f2e3ea41c 161 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 6 151 7.5E-28 T 15-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Gene3D G3DSA:2.40.50.100 742 817 3.7E-29 T 15-10-2018 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 14 1384 12.28 T 15-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Gene3D G3DSA:2.40.270.10 1076 1284 1.2E-84 T 15-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Gene3D G3DSA:3.90.1100.10 469 658 9.4E-67 T 15-10-2018 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1104 1116 - T 15-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Pfam PF04560 RNA polymerase Rpb2, domain 7 1308 1382 6.9E-27 T 15-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Pfam PF00562 RNA polymerase Rpb2, domain 6 746 1306 4.0E-159 T 15-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Gene3D G3DSA:3.90.1800.10 1294 1345 7.2E-11 T 15-10-2018 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Gene3D G3DSA:2.40.50.150 862 985 8.1E-44 T 15-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Gene3D G3DSA:2.40.270.10 819 861 1.5E-6 T 15-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1381 0.0 T 15-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Gene3D G3DSA:3.90.1100.10 674 741 9.1E-21 T 15-10-2018 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Gene3D G3DSA:3.90.1100.10 19 177 5.9E-55 T 15-10-2018 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Pfam PF04565 RNA polymerase Rpb2, domain 3 541 608 5.1E-27 T 15-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Pfam PF10385 RNA polymerase beta subunit external 1 domain 619 684 2.9E-23 T 15-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Pfam PF04561 RNA polymerase Rpb2, domain 2 450 482 3.7E-5 T 15-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Pfam PF04561 RNA polymerase Rpb2, domain 2 157 227 4.4E-8 T 15-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Gene3D G3DSA:3.90.1110.10 327 468 4.1E-28 T 15-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 Pfam PF04563 RNA polymerase beta subunit 28 527 2.1E-41 T 15-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_00190 c133129fcbe9d8bc211d28a9fcff945c 1384 SUPERFAMILY SSF64484 13 1382 0.0 T 15-10-2018 D934_06345 2d162040d6a325f414bfda0b3a798f91 624 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 331 620 1.0E-29 T 15-10-2018 IPR024455 Phage capsid D934_06345 2d162040d6a325f414bfda0b3a798f91 624 Pfam PF04586 Caudovirus prohead serine protease 69 163 8.5E-6 T 15-10-2018 IPR006433 Prohead protease D934_06345 2d162040d6a325f414bfda0b3a798f91 624 Pfam PF05065 Phage capsid family 356 621 9.5E-50 T 15-10-2018 IPR024455 Phage capsid D934_06345 2d162040d6a325f414bfda0b3a798f91 624 SUPERFAMILY SSF56563 353 621 1.57E-41 T 15-10-2018 D934_09570 c7eec3b413dc2e48942a2a48951aecf2 246 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 125 228 1.7E-38 T 15-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_09570 c7eec3b413dc2e48942a2a48951aecf2 246 Gene3D G3DSA:1.10.287.990 51 117 7.0E-24 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_09570 c7eec3b413dc2e48942a2a48951aecf2 246 PRINTS PR01703 Manganese superoxide dismutase signature 37 48 1.6E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_09570 c7eec3b413dc2e48942a2a48951aecf2 246 PRINTS PR01703 Manganese superoxide dismutase signature 58 71 1.6E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_09570 c7eec3b413dc2e48942a2a48951aecf2 246 PRINTS PR01703 Manganese superoxide dismutase signature 154 162 1.6E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_09570 c7eec3b413dc2e48942a2a48951aecf2 246 PRINTS PR01703 Manganese superoxide dismutase signature 100 113 1.6E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_09570 c7eec3b413dc2e48942a2a48951aecf2 246 PRINTS PR01703 Manganese superoxide dismutase signature 194 206 1.6E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_09570 c7eec3b413dc2e48942a2a48951aecf2 246 Gene3D G3DSA:2.40.500.20 123 246 6.3E-46 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_09570 c7eec3b413dc2e48942a2a48951aecf2 246 SUPERFAMILY SSF46609 26 118 1.7E-33 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_09570 c7eec3b413dc2e48942a2a48951aecf2 246 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 196 203 - T 15-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_09570 c7eec3b413dc2e48942a2a48951aecf2 246 PIRSF PIRSF000349 8 239 1.2E-79 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_09570 c7eec3b413dc2e48942a2a48951aecf2 246 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 34 117 3.7E-28 T 15-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_09570 c7eec3b413dc2e48942a2a48951aecf2 246 SUPERFAMILY SSF54719 121 234 8.51E-43 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D934_09490 aa3d347b6f70afd0f3ac21b4e46dd864 260 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 16 254 33.158 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_09490 aa3d347b6f70afd0f3ac21b4e46dd864 260 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 22 252 1.7E-87 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_09490 aa3d347b6f70afd0f3ac21b4e46dd864 260 Gene3D G3DSA:3.30.70.980 98 251 3.3E-50 T 15-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_09490 aa3d347b6f70afd0f3ac21b4e46dd864 260 SUPERFAMILY SSF75625 23 253 3.14E-83 T 15-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_09490 aa3d347b6f70afd0f3ac21b4e46dd864 260 Gene3D G3DSA:3.30.70.980 143 220 3.3E-50 T 15-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_09490 aa3d347b6f70afd0f3ac21b4e46dd864 260 Pfam PF01709 Transcriptional regulator 23 252 3.5E-85 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_09490 aa3d347b6f70afd0f3ac21b4e46dd864 260 Gene3D G3DSA:1.10.10.200 31 94 4.6E-26 T 15-10-2018 IPR017856 Integrase-like, N-terminal D934_05640 b3e8660199174fd846dd35f41b9a498d 323 SMART SM00116 109 158 0.17 T 15-10-2018 IPR000644 CBS domain D934_05640 b3e8660199174fd846dd35f41b9a498d 323 SMART SM00116 172 220 6.4 T 15-10-2018 IPR000644 CBS domain D934_05640 b3e8660199174fd846dd35f41b9a498d 323 Pfam PF00571 CBS domain 171 220 3.6E-5 T 15-10-2018 IPR000644 CBS domain D934_05640 b3e8660199174fd846dd35f41b9a498d 323 Pfam PF00571 CBS domain 100 155 7.8E-7 T 15-10-2018 IPR000644 CBS domain D934_05640 b3e8660199174fd846dd35f41b9a498d 323 Gene3D G3DSA:3.90.1280.20 109 168 1.4E-20 T 15-10-2018 D934_05640 b3e8660199174fd846dd35f41b9a498d 323 Gene3D G3DSA:3.30.465.10 227 315 6.2E-28 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D934_05640 b3e8660199174fd846dd35f41b9a498d 323 SUPERFAMILY SSF54631 97 234 2.68E-30 T 15-10-2018 D934_05640 b3e8660199174fd846dd35f41b9a498d 323 Pfam PF03471 Transporter associated domain 240 314 1.8E-22 T 15-10-2018 IPR005170 Transporter-associated domain D934_05640 b3e8660199174fd846dd35f41b9a498d 323 SMART SM01091 238 316 4.1E-29 T 15-10-2018 IPR005170 Transporter-associated domain D934_05640 b3e8660199174fd846dd35f41b9a498d 323 Gene3D G3DSA:3.90.1280.20 169 226 5.8E-29 T 15-10-2018 D934_05640 b3e8660199174fd846dd35f41b9a498d 323 SUPERFAMILY SSF56176 236 321 3.27E-25 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D934_09760 cbec30dd5224e4f4d549ebaf89611ae1 307 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 16 298 7.5E-147 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09760 cbec30dd5224e4f4d549ebaf89611ae1 307 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 14 299 59.041 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09760 cbec30dd5224e4f4d549ebaf89611ae1 307 SUPERFAMILY SSF55681 15 298 1.24E-129 T 15-10-2018 D934_09760 cbec30dd5224e4f4d549ebaf89611ae1 307 Gene3D G3DSA:3.30.930.10 4 222 1.1E-108 T 15-10-2018 D934_09760 cbec30dd5224e4f4d549ebaf89611ae1 307 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 15 305 3.4E-157 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09760 cbec30dd5224e4f4d549ebaf89611ae1 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 120 144 3.6E-66 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09760 cbec30dd5224e4f4d549ebaf89611ae1 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 68 83 3.6E-66 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09760 cbec30dd5224e4f4d549ebaf89611ae1 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 259 275 3.6E-66 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09760 cbec30dd5224e4f4d549ebaf89611ae1 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 89 109 3.6E-66 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09760 cbec30dd5224e4f4d549ebaf89611ae1 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 146 166 3.6E-66 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09760 cbec30dd5224e4f4d549ebaf89611ae1 307 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 169 184 3.6E-66 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09760 cbec30dd5224e4f4d549ebaf89611ae1 307 Gene3D G3DSA:1.20.58.180 223 304 5.9E-32 T 15-10-2018 D934_09855 bc5b0c98deab800af75a23db0f253304 203 Gene3D G3DSA:3.30.1130.10 64 197 1.2E-52 T 15-10-2018 D934_09855 bc5b0c98deab800af75a23db0f253304 203 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 17 194 7.7E-66 T 15-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 D934_09855 bc5b0c98deab800af75a23db0f253304 203 Pfam PF01227 GTP cyclohydrolase I 17 194 4.3E-74 T 15-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 D934_09855 bc5b0c98deab800af75a23db0f253304 203 SUPERFAMILY SSF55620 6 195 2.96E-76 T 15-10-2018 D934_09855 bc5b0c98deab800af75a23db0f253304 203 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 74 90 - T 15-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 D934_09855 bc5b0c98deab800af75a23db0f253304 203 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 12 195 38.941 T 15-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 D934_09855 bc5b0c98deab800af75a23db0f253304 203 Gene3D G3DSA:1.10.286.10 1 60 5.3E-21 T 15-10-2018 D934_09855 bc5b0c98deab800af75a23db0f253304 203 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 122 132 - T 15-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 D934_10760 e871d4e9cac882401100f4d1b436c603 79 Pfam PF01381 Helix-turn-helix 2 44 9.4E-11 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_10760 e871d4e9cac882401100f4d1b436c603 79 SUPERFAMILY SSF47413 1 73 1.96E-20 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_10760 e871d4e9cac882401100f4d1b436c603 79 Gene3D G3DSA:1.10.260.40 1 79 7.1E-23 T 15-10-2018 D934_10760 e871d4e9cac882401100f4d1b436c603 79 SMART SM00530 1 48 0.0098 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_10760 e871d4e9cac882401100f4d1b436c603 79 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 1 62 7.2E-23 T 15-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 D934_07470 ea1154fdf5f64695f1ee3ca8ebd274f6 442 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 264 417 2.0E-22 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal D934_07470 ea1154fdf5f64695f1ee3ca8ebd274f6 442 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 13 218 2.5E-57 T 15-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain D934_07470 ea1154fdf5f64695f1ee3ca8ebd274f6 442 SMART SM00833 264 417 1.1E-40 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal D934_07470 ea1154fdf5f64695f1ee3ca8ebd274f6 442 SUPERFAMILY SSF52540 11 317 9.74E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_07470 ea1154fdf5f64695f1ee3ca8ebd274f6 442 Gene3D G3DSA:3.40.50.300 10 237 3.7E-67 T 15-10-2018 D934_13345 872f61cfe0cfbd9c8915e8cd2c7f627c 496 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 209 22.05 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 D934_13345 872f61cfe0cfbd9c8915e8cd2c7f627c 496 Pfam PF01256 Carbohydrate kinase 247 482 1.7E-54 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 D934_13345 872f61cfe0cfbd9c8915e8cd2c7f627c 496 SUPERFAMILY SSF64153 7 246 3.27E-57 T 15-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 D934_13345 872f61cfe0cfbd9c8915e8cd2c7f627c 496 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 224 491 22.287 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 D934_13345 872f61cfe0cfbd9c8915e8cd2c7f627c 496 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 229 491 1.4E-66 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 D934_13345 872f61cfe0cfbd9c8915e8cd2c7f627c 496 Pfam PF03853 YjeF-related protein N-terminus 30 186 1.1E-39 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 D934_13345 872f61cfe0cfbd9c8915e8cd2c7f627c 496 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 314 324 - T 15-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site D934_13345 872f61cfe0cfbd9c8915e8cd2c7f627c 496 SUPERFAMILY SSF53613 224 490 3.27E-73 T 15-10-2018 IPR029056 Ribokinase-like D934_13345 872f61cfe0cfbd9c8915e8cd2c7f627c 496 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 430 440 - T 15-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site D934_13345 872f61cfe0cfbd9c8915e8cd2c7f627c 496 PIRSF PIRSF017184 6 493 3.0E-119 T 15-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 D934_13345 872f61cfe0cfbd9c8915e8cd2c7f627c 496 Gene3D G3DSA:3.40.1190.20 219 492 2.3E-79 T 15-10-2018 IPR029056 Ribokinase-like D934_13345 872f61cfe0cfbd9c8915e8cd2c7f627c 496 Gene3D G3DSA:3.40.50.10260 4 215 7.3E-53 T 15-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 D934_13345 872f61cfe0cfbd9c8915e8cd2c7f627c 496 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 11 209 7.7E-37 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 D934_05865 2aa33cdffc7f0de43823dc37b42906a5 112 Pfam PF01371 Trp repressor protein 16 100 2.3E-29 T 15-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 D934_05865 2aa33cdffc7f0de43823dc37b42906a5 112 SUPERFAMILY SSF48295 15 100 2.35E-24 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 D934_05865 2aa33cdffc7f0de43823dc37b42906a5 112 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 16 98 6.3E-18 T 15-10-2018 IPR013368 TrpR homologue YerC/YecD D934_05865 2aa33cdffc7f0de43823dc37b42906a5 112 PIRSF PIRSF012508 4 105 3.3E-33 T 15-10-2018 IPR013368 TrpR homologue YerC/YecD D934_05865 2aa33cdffc7f0de43823dc37b42906a5 112 Gene3D G3DSA:1.10.1270.10 8 104 7.2E-29 T 15-10-2018 IPR038116 TrpR-like superfamily D934_08250 3d3eec1f43dcf202eaa95415ddc959e7 406 SUPERFAMILY SSF102114 130 368 3.14E-16 T 15-10-2018 D934_08250 3d3eec1f43dcf202eaa95415ddc959e7 406 Gene3D G3DSA:1.10.150.530 27 89 1.3E-23 T 15-10-2018 D934_08250 3d3eec1f43dcf202eaa95415ddc959e7 406 Gene3D G3DSA:3.20.20.70 90 369 7.1E-105 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_08250 3d3eec1f43dcf202eaa95415ddc959e7 406 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 26 388 2.2E-133 T 15-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 D934_08250 3d3eec1f43dcf202eaa95415ddc959e7 406 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 27 384 72.563 T 15-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 D934_08250 3d3eec1f43dcf202eaa95415ddc959e7 406 Pfam PF04055 Radical SAM superfamily 134 303 8.4E-18 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D934_08250 3d3eec1f43dcf202eaa95415ddc959e7 406 PIRSF PIRSF006004 20 397 1.1E-148 T 15-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 D934_01915 a5908f87ad443401388cf43ca928d23b 321 Pfam PF07549 SecD/SecF GG Motif 40 64 7.8E-7 T 15-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site D934_01915 a5908f87ad443401388cf43ca928d23b 321 Gene3D G3DSA:1.20.1640.10 136 307 3.0E-9 T 15-10-2018 D934_01915 a5908f87ad443401388cf43ca928d23b 321 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 15 301 25.911 T 15-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 D934_01915 a5908f87ad443401388cf43ca928d23b 321 Pfam PF02355 Protein export membrane protein 130 296 1.2E-47 T 15-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial D934_01915 a5908f87ad443401388cf43ca928d23b 321 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 8.7E-28 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D934_01915 a5908f87ad443401388cf43ca928d23b 321 PRINTS PR01755 Bacterial translocase SecF protein signature 42 57 8.7E-28 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D934_01915 a5908f87ad443401388cf43ca928d23b 321 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 8.7E-28 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D934_01915 a5908f87ad443401388cf43ca928d23b 321 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 8.7E-28 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D934_01915 a5908f87ad443401388cf43ca928d23b 321 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 43 291 1.5E-61 T 15-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 D934_01915 a5908f87ad443401388cf43ca928d23b 321 SUPERFAMILY SSF82866 78 296 4.58E-34 T 15-10-2018 D934_09505 ccadf2b8c86d967417928370ef7c4fd8 397 Gene3D G3DSA:3.40.50.300 178 379 3.4E-102 T 15-10-2018 D934_09505 ccadf2b8c86d967417928370ef7c4fd8 397 Gene3D G3DSA:1.20.120.140 112 389 3.4E-102 T 15-10-2018 D934_09505 ccadf2b8c86d967417928370ef7c4fd8 397 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 118 390 6.8E-100 T 15-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 D934_09505 ccadf2b8c86d967417928370ef7c4fd8 397 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 364 377 - T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D934_09505 ccadf2b8c86d967417928370ef7c4fd8 397 SMART SM00963 95 174 3.4E-16 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D934_09505 ccadf2b8c86d967417928370ef7c4fd8 397 SUPERFAMILY SSF52540 140 389 9.15E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_09505 ccadf2b8c86d967417928370ef7c4fd8 397 SMART SM00962 189 391 2.5E-109 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D934_09505 ccadf2b8c86d967417928370ef7c4fd8 397 Pfam PF02881 SRP54-type protein, helical bundle domain 105 170 2.3E-12 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D934_09505 ccadf2b8c86d967417928370ef7c4fd8 397 Pfam PF00448 SRP54-type protein, GTPase domain 189 390 9.0E-72 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D934_09505 ccadf2b8c86d967417928370ef7c4fd8 397 SMART SM00382 188 367 1.2E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_09505 ccadf2b8c86d967417928370ef7c4fd8 397 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 117 391 59.69 T 15-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 D934_08315 a27218f6f52bd31761adbf59b5b704c8 160 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 36 4.4E-4 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_08315 a27218f6f52bd31761adbf59b5b704c8 160 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 16 138 1.0E-38 T 15-10-2018 IPR013362 Pilus modification type IV, PilV D934_00620 31a1281aad75da81f17ef40c9b4e2d96 527 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 513 1.5E-217 T 15-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 D934_00620 31a1281aad75da81f17ef40c9b4e2d96 527 Pfam PF12161 HsdM N-terminal domain 12 167 2.3E-19 T 15-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain D934_00620 31a1281aad75da81f17ef40c9b4e2d96 527 Pfam PF02384 N-6 DNA Methylase 183 491 8.4E-106 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 D934_00620 31a1281aad75da81f17ef40c9b4e2d96 527 Gene3D G3DSA:1.20.1260.30 2 201 1.4E-50 T 15-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily D934_00620 31a1281aad75da81f17ef40c9b4e2d96 527 Gene3D G3DSA:3.40.50.150 205 485 8.0E-76 T 15-10-2018 D934_00620 31a1281aad75da81f17ef40c9b4e2d96 527 SUPERFAMILY SSF53335 11 525 4.19E-121 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_00620 31a1281aad75da81f17ef40c9b4e2d96 527 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 207 223 1.3E-17 T 15-10-2018 D934_00620 31a1281aad75da81f17ef40c9b4e2d96 527 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 306 318 1.3E-17 T 15-10-2018 D934_00620 31a1281aad75da81f17ef40c9b4e2d96 527 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 344 368 1.3E-17 T 15-10-2018 D934_00620 31a1281aad75da81f17ef40c9b4e2d96 527 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 233 247 1.3E-17 T 15-10-2018 D934_00620 31a1281aad75da81f17ef40c9b4e2d96 527 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 309 315 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D934_06835 ce91b5be44724f9934ae7cb7f51b6ac6 123 Gene3D G3DSA:3.40.710.10 2 122 1.7E-33 T 15-10-2018 D934_06835 ce91b5be44724f9934ae7cb7f51b6ac6 123 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 3 119 1.2E-29 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_06835 ce91b5be44724f9934ae7cb7f51b6ac6 123 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 3 17 4.4E-8 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_06835 ce91b5be44724f9934ae7cb7f51b6ac6 123 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 18 32 4.4E-8 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_06835 ce91b5be44724f9934ae7cb7f51b6ac6 123 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 85 98 4.4E-8 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_06835 ce91b5be44724f9934ae7cb7f51b6ac6 123 SUPERFAMILY SSF56601 3 121 1.23E-26 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D934_02900 090d9d60037afbe3229d2f6765d61d8b 72 Gene3D G3DSA:3.10.350.10 5 72 6.2E-20 T 15-10-2018 IPR036779 LysM domain superfamily D934_02900 090d9d60037afbe3229d2f6765d61d8b 72 Pfam PF05489 Phage Tail Protein X 4 63 1.5E-27 T 15-10-2018 IPR008861 Phage Tail Protein X-like D934_05065 090d9d60037afbe3229d2f6765d61d8b 72 Gene3D G3DSA:3.10.350.10 5 72 6.2E-20 T 15-10-2018 IPR036779 LysM domain superfamily D934_05065 090d9d60037afbe3229d2f6765d61d8b 72 Pfam PF05489 Phage Tail Protein X 4 63 1.5E-27 T 15-10-2018 IPR008861 Phage Tail Protein X-like D934_12805 1c5e39e712235777a318d6b01336b01b 860 Pfam PF13439 Glycosyltransferase Family 4 18 203 2.0E-9 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D934_12805 1c5e39e712235777a318d6b01336b01b 860 Gene3D G3DSA:3.40.50.2000 12 395 4.8E-52 T 15-10-2018 D934_12805 1c5e39e712235777a318d6b01336b01b 860 Gene3D G3DSA:3.40.50.2000 200 383 4.8E-52 T 15-10-2018 D934_12805 1c5e39e712235777a318d6b01336b01b 860 Gene3D G3DSA:3.40.50.2000 655 822 4.2E-23 T 15-10-2018 D934_12805 1c5e39e712235777a318d6b01336b01b 860 Pfam PF00534 Glycosyl transferases group 1 224 379 4.1E-29 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 D934_12805 1c5e39e712235777a318d6b01336b01b 860 Pfam PF00534 Glycosyl transferases group 1 674 819 3.3E-18 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 D934_12805 1c5e39e712235777a318d6b01336b01b 860 SUPERFAMILY SSF53756 518 820 8.37E-35 T 15-10-2018 D934_12805 1c5e39e712235777a318d6b01336b01b 860 SUPERFAMILY SSF53756 16 401 2.72E-61 T 15-10-2018 D934_06065 e8e06673404ab21702a54276bfaebcb4 507 Pfam PF01266 FAD dependent oxidoreductase 7 329 4.7E-46 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 D934_06065 e8e06673404ab21702a54276bfaebcb4 507 Gene3D G3DSA:3.30.9.10 84 325 8.8E-131 T 15-10-2018 D934_06065 e8e06673404ab21702a54276bfaebcb4 507 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 389 479 1.2E-12 T 15-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D934_06065 e8e06673404ab21702a54276bfaebcb4 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 29 6.7E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D934_06065 e8e06673404ab21702a54276bfaebcb4 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 6 18 6.7E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D934_06065 e8e06673404ab21702a54276bfaebcb4 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 47 6.7E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D934_06065 e8e06673404ab21702a54276bfaebcb4 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 350 362 6.7E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D934_06065 e8e06673404ab21702a54276bfaebcb4 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 80 92 6.7E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D934_06065 e8e06673404ab21702a54276bfaebcb4 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 318 324 6.7E-28 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D934_06065 e8e06673404ab21702a54276bfaebcb4 507 Gene3D G3DSA:3.50.50.60 7 369 8.8E-131 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_06065 e8e06673404ab21702a54276bfaebcb4 507 SUPERFAMILY SSF51905 1 370 2.75E-29 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_06065 e8e06673404ab21702a54276bfaebcb4 507 Gene3D G3DSA:1.10.8.870 393 464 8.4E-23 T 15-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D934_06065 e8e06673404ab21702a54276bfaebcb4 507 SUPERFAMILY SSF54373 231 324 1.14E-6 T 15-10-2018 D934_00670 f93f439ecb2c46e6b88c201cf373afdc 297 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 296 1.9E-80 T 15-10-2018 IPR008487 Protein of unknown function DUF769 D934_13170 5ef61898c71fb5e9e9c2a79698bc1844 480 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 18 476 42.912 T 15-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13170 5ef61898c71fb5e9e9c2a79698bc1844 480 SUPERFAMILY SSF53244 322 470 9.52E-43 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D934_13170 5ef61898c71fb5e9e9c2a79698bc1844 480 Pfam PF01225 Mur ligase family, catalytic domain 21 117 1.2E-25 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 D934_13170 5ef61898c71fb5e9e9c2a79698bc1844 480 SUPERFAMILY SSF51984 20 105 1.24E-26 T 15-10-2018 D934_13170 5ef61898c71fb5e9e9c2a79698bc1844 480 Gene3D G3DSA:3.40.1190.10 107 319 3.2E-81 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D934_13170 5ef61898c71fb5e9e9c2a79698bc1844 480 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 470 3.0E-161 T 15-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13170 5ef61898c71fb5e9e9c2a79698bc1844 480 Gene3D G3DSA:3.40.50.720 20 105 7.4E-31 T 15-10-2018 D934_13170 5ef61898c71fb5e9e9c2a79698bc1844 480 Gene3D G3DSA:3.90.190.20 320 475 2.2E-44 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D934_13170 5ef61898c71fb5e9e9c2a79698bc1844 480 Pfam PF02875 Mur ligase family, glutamate ligase domain 338 413 8.4E-18 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 D934_13170 5ef61898c71fb5e9e9c2a79698bc1844 480 SUPERFAMILY SSF53623 104 320 1.44E-70 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D934_13170 5ef61898c71fb5e9e9c2a79698bc1844 480 Pfam PF08245 Mur ligase middle domain 123 302 2.3E-29 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D934_13470 2f5d7b5a13ae010392f02145bffd86a2 148 SUPERFAMILY SSF54523 7 145 1.52E-24 T 15-10-2018 D934_13470 2f5d7b5a13ae010392f02145bffd86a2 148 Gene3D G3DSA:3.30.700.10 7 146 2.3E-27 T 15-10-2018 D934_13470 2f5d7b5a13ae010392f02145bffd86a2 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 8.0E-10 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_13470 2f5d7b5a13ae010392f02145bffd86a2 148 Pfam PF00114 Pilin (bacterial filament) 35 145 1.5E-23 T 15-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 D934_13470 2f5d7b5a13ae010392f02145bffd86a2 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 2.6E-8 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_02615 ca23b43be4e878ebe68adceb4a4bd5b4 254 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 9 242 37.502 T 15-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 D934_02615 ca23b43be4e878ebe68adceb4a4bd5b4 254 SUPERFAMILY SSF55729 84 243 1.09E-18 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase D934_02615 ca23b43be4e878ebe68adceb4a4bd5b4 254 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 19 89 8.6E-17 T 15-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 D934_02615 ca23b43be4e878ebe68adceb4a4bd5b4 254 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 109 236 4.1E-32 T 15-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 D934_02615 ca23b43be4e878ebe68adceb4a4bd5b4 254 PIRSF PIRSF037208 2 254 1.0E-90 T 15-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 D934_08205 6caaed83a7f32b4a7c159c158fa0375c 116 PIRSF PIRSF021239 5 116 1.1E-49 T 15-10-2018 IPR007437 Protein of unknown function DUF486 D934_08205 6caaed83a7f32b4a7c159c158fa0375c 116 SUPERFAMILY SSF103481 78 115 5.36E-5 T 15-10-2018 D934_08205 6caaed83a7f32b4a7c159c158fa0375c 116 Pfam PF04342 Putative member of DMT superfamily (DUF486) 12 114 2.0E-43 T 15-10-2018 IPR007437 Protein of unknown function DUF486 D934_12390 48bcdb8edb71d0515085082cec3e49c6 140 Pfam PF10876 Phage tail assemb.y chaperone protein, TAC 7 138 2.1E-64 T 15-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC D934_12390 48bcdb8edb71d0515085082cec3e49c6 140 ProDom PD298513 SIMILAR PD1186 XF1585/XF1690 PD0970 9 127 1.0E-53 T 15-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC D934_07970 301d6db94f0d273070d25f40318f45f9 154 Pfam PF00210 Ferritin-like domain 8 144 6.7E-37 T 15-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 D934_07970 301d6db94f0d273070d25f40318f45f9 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 151 1.9E-69 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D934_07970 301d6db94f0d273070d25f40318f45f9 154 SUPERFAMILY SSF47240 1 152 2.44E-51 T 15-10-2018 IPR009078 Ferritin-like superfamily D934_07970 301d6db94f0d273070d25f40318f45f9 154 PRINTS PR00601 Bacterioferritin signature 65 85 5.9E-66 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D934_07970 301d6db94f0d273070d25f40318f45f9 154 PRINTS PR00601 Bacterioferritin signature 44 64 5.9E-66 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D934_07970 301d6db94f0d273070d25f40318f45f9 154 PRINTS PR00601 Bacterioferritin signature 107 127 5.9E-66 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D934_07970 301d6db94f0d273070d25f40318f45f9 154 PRINTS PR00601 Bacterioferritin signature 3 22 5.9E-66 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D934_07970 301d6db94f0d273070d25f40318f45f9 154 PRINTS PR00601 Bacterioferritin signature 23 43 5.9E-66 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D934_07970 301d6db94f0d273070d25f40318f45f9 154 PRINTS PR00601 Bacterioferritin signature 128 149 5.9E-66 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D934_07970 301d6db94f0d273070d25f40318f45f9 154 PRINTS PR00601 Bacterioferritin signature 86 106 5.9E-66 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D934_07970 301d6db94f0d273070d25f40318f45f9 154 PIRSF PIRSF002560 1 154 8.3E-69 T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D934_07970 301d6db94f0d273070d25f40318f45f9 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 15-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D934_07970 301d6db94f0d273070d25f40318f45f9 154 Gene3D G3DSA:1.20.1260.10 1 154 1.1E-65 T 15-10-2018 IPR012347 Ferritin-like D934_13605 b28debe72448b711f95d261e4d1a386e 267 Pfam PF01061 ABC-2 type transporter 23 228 1.7E-24 T 15-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 D934_04360 01cdaf888e580bb7389811393d8ef10f 600 SMART SM00956 406 509 2.3E-59 T 15-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 D934_04360 01cdaf888e580bb7389811393d8ef10f 600 Gene3D G3DSA:1.10.150.80 527 599 4.9E-21 T 15-10-2018 D934_04360 01cdaf888e580bb7389811393d8ef10f 600 Pfam PF16124 RecQ zinc-binding 337 399 1.2E-19 T 15-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain D934_04360 01cdaf888e580bb7389811393d8ef10f 600 Gene3D G3DSA:3.40.50.300 1 202 9.8E-81 T 15-10-2018 D934_04360 01cdaf888e580bb7389811393d8ef10f 600 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 10 458 1.0E-155 T 15-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 D934_04360 01cdaf888e580bb7389811393d8ef10f 600 SMART SM00490 244 325 3.7E-23 T 15-10-2018 IPR001650 Helicase, C-terminal D934_04360 01cdaf888e580bb7389811393d8ef10f 600 Gene3D G3DSA:1.10.10.10 336 521 9.7E-54 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_04360 01cdaf888e580bb7389811393d8ef10f 600 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 8 598 4.6E-281 T 15-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 D934_04360 01cdaf888e580bb7389811393d8ef10f 600 SMART SM00487 16 212 2.2E-28 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_04360 01cdaf888e580bb7389811393d8ef10f 600 SUPERFAMILY SSF47819 527 596 7.2E-21 T 15-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 D934_04360 01cdaf888e580bb7389811393d8ef10f 600 Pfam PF09382 RQC domain 403 509 3.0E-43 T 15-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 D934_04360 01cdaf888e580bb7389811393d8ef10f 600 SUPERFAMILY SSF52540 4 191 1.49E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04360 01cdaf888e580bb7389811393d8ef10f 600 SUPERFAMILY SSF52540 202 454 1.12E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04360 01cdaf888e580bb7389811393d8ef10f 600 SMART SM00341 526 599 2.2E-10 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 D934_04360 01cdaf888e580bb7389811393d8ef10f 600 Pfam PF00270 DEAD/DEAH box helicase 24 179 3.4E-19 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D934_04360 01cdaf888e580bb7389811393d8ef10f 600 Pfam PF00570 HRDC domain 530 596 2.2E-22 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 D934_04360 01cdaf888e580bb7389811393d8ef10f 600 Gene3D G3DSA:3.40.50.300 203 334 2.2E-36 T 15-10-2018 D934_04360 01cdaf888e580bb7389811393d8ef10f 600 Pfam PF00271 Helicase conserved C-terminal domain 220 324 1.0E-13 T 15-10-2018 IPR001650 Helicase, C-terminal D934_09645 d197581c7a13fc8f7799963ee3bd4f2d 432 SUPERFAMILY SSF118215 15 423 1.44E-100 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D934_09645 d197581c7a13fc8f7799963ee3bd4f2d 432 PRINTS PR00173 Glutamate-aspartate symporter signature 351 370 9.2E-35 T 15-10-2018 D934_09645 d197581c7a13fc8f7799963ee3bd4f2d 432 PRINTS PR00173 Glutamate-aspartate symporter signature 251 270 9.2E-35 T 15-10-2018 D934_09645 d197581c7a13fc8f7799963ee3bd4f2d 432 PRINTS PR00173 Glutamate-aspartate symporter signature 316 342 9.2E-35 T 15-10-2018 D934_09645 d197581c7a13fc8f7799963ee3bd4f2d 432 PRINTS PR00173 Glutamate-aspartate symporter signature 91 116 9.2E-35 T 15-10-2018 D934_09645 d197581c7a13fc8f7799963ee3bd4f2d 432 PRINTS PR00173 Glutamate-aspartate symporter signature 378 398 9.2E-35 T 15-10-2018 D934_09645 d197581c7a13fc8f7799963ee3bd4f2d 432 PRINTS PR00173 Glutamate-aspartate symporter signature 168 190 9.2E-35 T 15-10-2018 D934_09645 d197581c7a13fc8f7799963ee3bd4f2d 432 PRINTS PR00173 Glutamate-aspartate symporter signature 61 81 9.2E-35 T 15-10-2018 D934_09645 d197581c7a13fc8f7799963ee3bd4f2d 432 Gene3D G3DSA:1.10.3860.10 6 428 6.1E-120 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D934_09645 d197581c7a13fc8f7799963ee3bd4f2d 432 Pfam PF00375 Sodium:dicarboxylate symporter family 15 422 6.8E-111 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 D934_00255 3baec08748ebb23c59712da2ddb2e523 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 6.4E-22 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_00255 3baec08748ebb23c59712da2ddb2e523 363 Gene3D G3DSA:3.40.50.300 4 278 4.1E-147 T 15-10-2018 D934_00255 3baec08748ebb23c59712da2ddb2e523 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.5E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_00255 3baec08748ebb23c59712da2ddb2e523 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.5E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_00255 3baec08748ebb23c59712da2ddb2e523 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.5E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_00255 3baec08748ebb23c59712da2ddb2e523 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.5E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_00255 3baec08748ebb23c59712da2ddb2e523 363 PIRSF PIRSF006641 1 363 1.4E-150 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 D934_00255 3baec08748ebb23c59712da2ddb2e523 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 8.0E-153 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 D934_00255 3baec08748ebb23c59712da2ddb2e523 363 Gene3D G3DSA:3.10.20.30 48 361 4.1E-147 T 15-10-2018 IPR012675 Beta-grasp domain superfamily D934_00255 3baec08748ebb23c59712da2ddb2e523 363 Gene3D G3DSA:1.10.150.300 113 200 4.1E-147 T 15-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 D934_00255 3baec08748ebb23c59712da2ddb2e523 363 SUPERFAMILY SSF52540 3 301 1.38E-81 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00255 3baec08748ebb23c59712da2ddb2e523 363 SUPERFAMILY SSF81271 279 360 7.19E-35 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 D934_00255 3baec08748ebb23c59712da2ddb2e523 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 43.866 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 D934_00255 3baec08748ebb23c59712da2ddb2e523 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 3.0E-38 T 15-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 2.0E-10 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 778 822 1.2E-15 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 827 873 1.1E-11 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 2.4E-9 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 584 9.6E-11 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 3.3E-14 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 2.1E-153 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 SUPERFAMILY SSF56719 30 520 7.06E-178 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 Gene3D G3DSA:1.10.268.10 369 492 7.4E-223 T 15-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 SMART SM00434 11 498 1.1E-274 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 873 0.0 T 15-10-2018 D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 SUPERFAMILY SSF101904 532 881 3.66E-103 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 Gene3D G3DSA:3.90.199.10 33 520 7.4E-223 T 15-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 875 23.977 T 15-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_13535 5767f7ec85ecea0e0014dd44e6c1796a 893 Gene3D G3DSA:3.30.1360.40 236 332 7.4E-223 T 15-10-2018 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 Gene3D G3DSA:3.40.50.620 122 435 1.7E-152 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 27 562 2.3E-126 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 Gene3D G3DSA:1.10.730.10 436 562 1.7E-152 T 15-10-2018 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 SMART SM01016 3 92 7.5E-34 T 15-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 SUPERFAMILY SSF47323 436 562 1.37E-34 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 SUPERFAMILY SSF55190 6 112 2.62E-25 T 15-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 131 140 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 121 136 2.4E-22 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 160 173 2.4E-22 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 136 152 2.4E-22 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 308 329 2.4E-22 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 Gene3D G3DSA:3.30.1360.70 4 112 4.1E-23 T 15-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 Pfam PF00750 tRNA synthetases class I (R) 103 410 2.3E-27 T 15-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 24 92 1.9E-22 T 15-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 Pfam PF05746 DALR anticodon binding domain 441 562 1.0E-33 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 562 24.692 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 SMART SM00836 441 562 2.6E-44 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 D934_01560 6b795ccecb1fa496b2fa10d2bed4d81c 562 SUPERFAMILY SSF52374 115 451 2.33E-89 T 15-10-2018 D934_01640 9289d04a90b0dc4c07e443beb83c027f 381 SUPERFAMILY SSF53067 15 355 1.12E-26 T 15-10-2018 D934_01640 9289d04a90b0dc4c07e443beb83c027f 381 Gene3D G3DSA:3.30.420.40 159 341 1.7E-128 T 15-10-2018 D934_01640 9289d04a90b0dc4c07e443beb83c027f 381 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 15 381 6.5E-170 T 15-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 D934_01640 9289d04a90b0dc4c07e443beb83c027f 381 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 14 381 42.625 T 15-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 D934_01640 9289d04a90b0dc4c07e443beb83c027f 381 Gene3D G3DSA:3.30.420.40 21 376 1.7E-128 T 15-10-2018 D934_09710 14ef99bc14ed469342e5ad88469d8c73 156 SUPERFAMILY SSF50341 5 113 5.89E-10 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 D934_09710 14ef99bc14ed469342e5ad88469d8c73 156 Pfam PF01584 CheW-like domain 11 145 9.4E-11 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D934_06430 76036e7a4c75628e647dd567b7b4ff1f 160 PIRSF PIRSF029208 25 159 6.9E-57 T 15-10-2018 IPR016912 Bacteriophage P2, GpU D934_06430 76036e7a4c75628e647dd567b7b4ff1f 160 Pfam PF06995 Phage P2 GpU 33 152 9.2E-39 T 15-10-2018 IPR009734 Myoviridae, GpU D934_06630 f0fb7f48081d8738424adde12370911c 493 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 333 483 4.4E-56 T 15-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit D934_06630 f0fb7f48081d8738424adde12370911c 493 Pfam PF17289 Terminase RNaseH-like domain 321 479 6.6E-13 T 15-10-2018 IPR035421 Terminase, large subunit gp17-like D934_05395 0b3a740415cba6e83becc3b77500a6be 164 Gene3D G3DSA:3.40.50.300 63 163 3.5E-30 T 15-10-2018 D934_05395 0b3a740415cba6e83becc3b77500a6be 164 Pfam PF02562 PhoH-like protein 65 156 1.9E-25 T 15-10-2018 IPR003714 PhoH-like protein GO:0005524 D934_05395 0b3a740415cba6e83becc3b77500a6be 164 SUPERFAMILY SSF52540 13 152 2.55E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_02700 6b526e5ad1ec6c024fc78d54210df0a2 267 Gene3D G3DSA:1.20.1180.10 202 267 6.7E-22 T 15-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 D934_02700 6b526e5ad1ec6c024fc78d54210df0a2 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 23 56 7.1E-7 T 15-10-2018 IPR001451 Hexapeptide repeat D934_02700 6b526e5ad1ec6c024fc78d54210df0a2 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 113 146 1.9E-7 T 15-10-2018 IPR001451 Hexapeptide repeat D934_02700 6b526e5ad1ec6c024fc78d54210df0a2 267 PIRSF PIRSF000456 9 267 1.5E-96 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 D934_02700 6b526e5ad1ec6c024fc78d54210df0a2 267 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 184 264 1.5E-24 T 15-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 D934_02700 6b526e5ad1ec6c024fc78d54210df0a2 267 SUPERFAMILY SSF51161 9 266 4.13E-71 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily D934_02700 6b526e5ad1ec6c024fc78d54210df0a2 267 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 12 265 5.7E-107 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 D934_02700 6b526e5ad1ec6c024fc78d54210df0a2 267 Gene3D G3DSA:2.160.10.10 4 194 5.3E-49 T 15-10-2018 D934_02700 6b526e5ad1ec6c024fc78d54210df0a2 267 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 9 267 44.744 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 D934_01735 9f176ddba83762b115d27739791704c9 131 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D934_01735 9f176ddba83762b115d27739791704c9 131 SUPERFAMILY SSF51230 4 127 1.44E-43 T 15-10-2018 IPR011053 Single hybrid motif D934_01735 9f176ddba83762b115d27739791704c9 131 Gene3D G3DSA:2.40.50.100 2 131 2.2E-47 T 15-10-2018 D934_01735 9f176ddba83762b115d27739791704c9 131 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 38.687 T 15-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 D934_01735 9f176ddba83762b115d27739791704c9 131 Pfam PF01597 Glycine cleavage H-protein 8 128 1.5E-43 T 15-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate D934_01735 9f176ddba83762b115d27739791704c9 131 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 129 4.8E-48 T 15-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 D934_02680 995a1379bb66a703c8e8cf086e4a42a5 435 Pfam PF00501 AMP-binding enzyme 115 278 8.2E-16 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D934_02680 995a1379bb66a703c8e8cf086e4a42a5 435 Gene3D G3DSA:3.30.300.30 333 433 4.4E-12 T 15-10-2018 D934_02680 995a1379bb66a703c8e8cf086e4a42a5 435 SUPERFAMILY SSF56801 8 433 4.97E-47 T 15-10-2018 D934_02680 995a1379bb66a703c8e8cf086e4a42a5 435 Gene3D G3DSA:3.40.50.12780 7 300 6.3E-23 T 15-10-2018 D934_11910 1e0cd14eb23127575c5eb61228fb9a79 109 Pfam PF12836 Helix-hairpin-helix motif 23 86 1.7E-23 T 15-10-2018 D934_11910 1e0cd14eb23127575c5eb61228fb9a79 109 SUPERFAMILY SSF47781 24 89 1.33E-24 T 15-10-2018 IPR010994 RuvA domain 2-like D934_11910 1e0cd14eb23127575c5eb61228fb9a79 109 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 25 86 7.0E-25 T 15-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain D934_11910 1e0cd14eb23127575c5eb61228fb9a79 109 Gene3D G3DSA:1.10.150.280 18 90 3.5E-21 T 15-10-2018 D934_10075 26198b23c153070175cc1cd58b74acd7 60 Pfam PF16762 Ribbon-helix-helix domain 1 57 3.4E-25 T 15-10-2018 IPR031914 XACb0070, ribbon-helix-helix domain D934_10075 26198b23c153070175cc1cd58b74acd7 60 Gene3D G3DSA:1.10.1220.10 1 32 9.6E-17 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 SUPERFAMILY SSF55124 3 135 1.49E-29 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 162 317 9.3E-42 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 SUPERFAMILY SSF55124 335 412 8.01E-17 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 339 405 5.5E-14 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 64 126 6.2E-16 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 PRINTS PR00397 Sirohaem Fe-binding site signature 421 439 2.1E-8 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 PRINTS PR00397 Sirohaem Fe-binding site signature 469 487 2.1E-8 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 Gene3D G3DSA:3.30.413.10 192 329 2.6E-38 T 15-10-2018 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 SUPERFAMILY SSF56014 136 333 1.57E-52 T 15-10-2018 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 SUPERFAMILY SSF56014 421 551 2.36E-33 T 15-10-2018 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 7 550 4.9E-278 T 15-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 Gene3D G3DSA:3.90.480.10 69 162 4.2E-25 T 15-10-2018 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 1 561 54.762 T 15-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 469 485 - T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 Gene3D G3DSA:3.30.413.10 417 552 2.6E-35 T 15-10-2018 D934_10580 67bb4da2437399481b3b6b8db2c5d212 568 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 421 549 0.045 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D934_01080 fbaae64a2c31bfe4f58c71bc212d8ffa 293 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 289 8.1E-104 T 15-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 D934_01080 fbaae64a2c31bfe4f58c71bc212d8ffa 293 SUPERFAMILY SSF53335 8 289 3.19E-75 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_01080 fbaae64a2c31bfe4f58c71bc212d8ffa 293 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 279 37.082 T 15-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 D934_01080 fbaae64a2c31bfe4f58c71bc212d8ffa 293 Gene3D G3DSA:3.40.50.150 1 293 9.2E-95 T 15-10-2018 D934_13770 0556341c5de1793cf208a25d8e53c8c7 250 SUPERFAMILY SSF52540 18 173 7.19E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_13770 0556341c5de1793cf208a25d8e53c8c7 250 Gene3D G3DSA:3.40.50.300 15 243 1.5E-7 T 15-10-2018 D934_13770 0556341c5de1793cf208a25d8e53c8c7 250 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 19 193 6.8E-6 T 15-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain D934_08120 1775cb0dfa87fa1c00bff6f075cd5e54 94 Gene3D G3DSA:3.40.210.20 5 89 6.3E-7 T 15-10-2018 D934_08120 1775cb0dfa87fa1c00bff6f075cd5e54 94 Pfam PF15515 MvaI/BcnI restriction endonuclease family 28 93 4.6E-14 T 15-10-2018 IPR029127 MvaI/BcnI restriction endonuclease D934_10025 96b20b0e1472938a0ffd4f49682f4173 488 Gene3D G3DSA:1.20.1280.70 364 424 3.1E-20 T 15-10-2018 D934_10025 96b20b0e1472938a0ffd4f49682f4173 488 PIRSF PIRSF000977 7 488 1.2E-174 T 15-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 D934_10025 96b20b0e1472938a0ffd4f49682f4173 488 Gene3D G3DSA:2.30.30.450 218 358 1.5E-39 T 15-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily D934_10025 96b20b0e1472938a0ffd4f49682f4173 488 SUPERFAMILY SSF53098 12 482 1.88E-114 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_10025 96b20b0e1472938a0ffd4f49682f4173 488 Pfam PF08411 Exonuclease C-terminal 216 482 8.4E-90 T 15-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 D934_10025 96b20b0e1472938a0ffd4f49682f4173 488 Gene3D G3DSA:3.30.420.10 10 205 2.5E-63 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D934_10025 96b20b0e1472938a0ffd4f49682f4173 488 SMART SM00479 14 207 1.2E-4 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D934_10025 96b20b0e1472938a0ffd4f49682f4173 488 Pfam PF00929 Exonuclease 17 195 8.8E-23 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D934_00965 3a6b03adc726477038b9de47cb422f21 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 136 6.1E-25 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 D934_00965 3a6b03adc726477038b9de47cb422f21 139 Gene3D G3DSA:3.30.420.270 63 132 9.1E-8 T 15-10-2018 D934_00580 900ff0f674a89ed59c8bcad00798fb29 307 SUPERFAMILY SSF116734 22 226 1.05E-32 T 15-10-2018 D934_00580 900ff0f674a89ed59c8bcad00798fb29 307 SUPERFAMILY SSF116734 228 305 1.64E-9 T 15-10-2018 D934_00580 900ff0f674a89ed59c8bcad00798fb29 307 Pfam PF01420 Type I restriction modification DNA specificity domain 117 191 5.1E-6 T 15-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 D934_00580 900ff0f674a89ed59c8bcad00798fb29 307 Gene3D G3DSA:3.90.220.20 24 223 8.0E-29 T 15-10-2018 D934_00580 900ff0f674a89ed59c8bcad00798fb29 307 Gene3D G3DSA:3.90.220.20 234 307 5.2E-8 T 15-10-2018 D934_12075 24c6f3895851081315b5a082dfb49899 121 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 4 116 2.0E-31 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 D934_12075 24c6f3895851081315b5a082dfb49899 121 Gene3D G3DSA:3.40.1350.10 10 121 8.9E-28 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 D934_12075 24c6f3895851081315b5a082dfb49899 121 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 115 21.342 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 D934_12075 24c6f3895851081315b5a082dfb49899 121 Pfam PF02021 Uncharacterised protein family UPF0102 12 100 2.7E-22 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 D934_12075 24c6f3895851081315b5a082dfb49899 121 SUPERFAMILY SSF52980 6 110 1.18E-13 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 D934_06005 719370a5bc0066561ddbbbe488d6f9eb 635 SUPERFAMILY SSF52922 493 619 3.27E-26 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D934_06005 719370a5bc0066561ddbbbe488d6f9eb 635 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 10 617 2.6E-248 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D934_06005 719370a5bc0066561ddbbbe488d6f9eb 635 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 285 9.9E-112 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D934_06005 719370a5bc0066561ddbbbe488d6f9eb 635 Gene3D G3DSA:3.40.50.920 497 621 1.7E-35 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D934_06005 719370a5bc0066561ddbbbe488d6f9eb 635 SUPERFAMILY SSF52518 319 505 1.03E-53 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold D934_06005 719370a5bc0066561ddbbbe488d6f9eb 635 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 1.9E-36 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D934_06005 719370a5bc0066561ddbbbe488d6f9eb 635 Pfam PF02780 Transketolase, C-terminal domain 498 613 2.4E-22 T 15-10-2018 IPR033248 Transketolase, C-terminal domain D934_06005 719370a5bc0066561ddbbbe488d6f9eb 635 SUPERFAMILY SSF52518 7 383 1.88E-68 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold D934_06005 719370a5bc0066561ddbbbe488d6f9eb 635 ProSitePatterns PS00802 Transketolase signature 2. 427 443 - T 15-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D934_06005 719370a5bc0066561ddbbbe488d6f9eb 635 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D934_06005 719370a5bc0066561ddbbbe488d6f9eb 635 SMART SM00861 321 485 3.5E-58 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D934_06005 719370a5bc0066561ddbbbe488d6f9eb 635 Gene3D G3DSA:3.40.50.970 318 492 1.8E-62 T 15-10-2018 D934_06005 719370a5bc0066561ddbbbe488d6f9eb 635 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 622 44.458 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D934_02950 7bdb837f8ce68e2f1b0aeebce11d53c8 87 Pfam PF04221 RelB antitoxin 4 71 9.0E-24 T 15-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ D934_02950 7bdb837f8ce68e2f1b0aeebce11d53c8 87 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 83 3.0E-23 T 15-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ D934_02950 7bdb837f8ce68e2f1b0aeebce11d53c8 87 PIRSF PIRSF003108 1 87 2.5E-32 T 15-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 D934_02950 7bdb837f8ce68e2f1b0aeebce11d53c8 87 Gene3D G3DSA:1.10.1220.10 4 79 2.3E-15 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 D934_03320 1ab25a2aa03e1e44b3aca51fafdf2bae 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 3.6E-29 T 15-10-2018 IPR027486 Ribosomal protein S10 domain D934_03320 1ab25a2aa03e1e44b3aca51fafdf2bae 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.6E-11 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03320 1ab25a2aa03e1e44b3aca51fafdf2bae 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.6E-11 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03320 1ab25a2aa03e1e44b3aca51fafdf2bae 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.6E-11 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03320 1ab25a2aa03e1e44b3aca51fafdf2bae 103 Gene3D G3DSA:3.30.70.600 1 103 9.7E-32 T 15-10-2018 IPR036838 Ribosomal protein S10 domain superfamily D934_03320 1ab25a2aa03e1e44b3aca51fafdf2bae 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 8.3E-40 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03320 1ab25a2aa03e1e44b3aca51fafdf2bae 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 23.633 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03320 1ab25a2aa03e1e44b3aca51fafdf2bae 103 SMART SM01403 7 101 2.9E-48 T 15-10-2018 IPR027486 Ribosomal protein S10 domain D934_03320 1ab25a2aa03e1e44b3aca51fafdf2bae 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 15-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03320 1ab25a2aa03e1e44b3aca51fafdf2bae 103 SUPERFAMILY SSF54999 5 102 9.16E-33 T 15-10-2018 IPR036838 Ribosomal protein S10 domain superfamily D934_00515 7ae127264f64ff83879a3eb268e8ec9c 513 Gene3D G3DSA:3.40.50.720 165 275 5.2E-19 T 15-10-2018 D934_00515 7ae127264f64ff83879a3eb268e8ec9c 513 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 48 154 1.3E-36 T 15-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 D934_00515 7ae127264f64ff83879a3eb268e8ec9c 513 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 168 490 1.6E-26 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D934_00515 7ae127264f64ff83879a3eb268e8ec9c 513 SUPERFAMILY SSF46548 25 177 7.85E-38 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D934_00515 7ae127264f64ff83879a3eb268e8ec9c 513 Gene3D G3DSA:1.10.1060.10 38 164 4.2E-33 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D934_00515 7ae127264f64ff83879a3eb268e8ec9c 513 PRINTS PR00419 Adrenodoxin reductase family signature 191 204 1.8E-29 T 15-10-2018 D934_00515 7ae127264f64ff83879a3eb268e8ec9c 513 PRINTS PR00419 Adrenodoxin reductase family signature 318 332 1.8E-29 T 15-10-2018 D934_00515 7ae127264f64ff83879a3eb268e8ec9c 513 PRINTS PR00419 Adrenodoxin reductase family signature 168 190 1.8E-29 T 15-10-2018 D934_00515 7ae127264f64ff83879a3eb268e8ec9c 513 PRINTS PR00419 Adrenodoxin reductase family signature 352 365 1.8E-29 T 15-10-2018 D934_00515 7ae127264f64ff83879a3eb268e8ec9c 513 Gene3D G3DSA:3.50.50.60 276 428 1.6E-37 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_00515 7ae127264f64ff83879a3eb268e8ec9c 513 SUPERFAMILY SSF51971 165 429 8.83E-65 T 15-10-2018 D934_00515 7ae127264f64ff83879a3eb268e8ec9c 513 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 26 502 3.4E-253 T 15-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 D934_09630 15269545df04552b676cdf702dee3dbf 197 SUPERFAMILY SSF56214 83 191 2.62E-24 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D934_09630 15269545df04552b676cdf702dee3dbf 197 SUPERFAMILY SSF56214 17 74 3.61E-8 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D934_09630 15269545df04552b676cdf702dee3dbf 197 Gene3D G3DSA:3.90.470.20 83 189 1.1E-20 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D934_09630 15269545df04552b676cdf702dee3dbf 197 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 83 157 1.3E-16 T 15-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D934_13830 e3a4ce715dc7ca0454f9fc5544ca63b7 37 Gene3D G3DSA:1.10.10.60 1 32 2.4E-6 T 15-10-2018 D934_06820 0f8cbf2d0202fcbd59c36cae1a457bc3 426 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 13 411 2.2E-86 T 15-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 D934_06820 0f8cbf2d0202fcbd59c36cae1a457bc3 426 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 93 410 2.9E-94 T 15-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 D934_06820 0f8cbf2d0202fcbd59c36cae1a457bc3 426 SUPERFAMILY SSF103473 11 411 9.42E-40 T 15-10-2018 IPR036259 MFS transporter superfamily D934_06820 0f8cbf2d0202fcbd59c36cae1a457bc3 426 Gene3D G3DSA:1.20.1250.20 8 227 5.2E-59 T 15-10-2018 D934_06820 0f8cbf2d0202fcbd59c36cae1a457bc3 426 Pfam PF07690 Major Facilitator Superfamily 19 372 5.0E-21 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D934_06820 0f8cbf2d0202fcbd59c36cae1a457bc3 426 Gene3D G3DSA:1.20.1250.20 229 417 7.5E-59 T 15-10-2018 D934_10120 03d943d8be0f1a82f2ad90ad8a775d50 282 Gene3D G3DSA:1.10.1200.160 214 252 1.1E-58 T 15-10-2018 D934_10120 03d943d8be0f1a82f2ad90ad8a775d50 282 Gene3D G3DSA:2.40.128.260 90 271 1.1E-58 T 15-10-2018 D934_10120 03d943d8be0f1a82f2ad90ad8a775d50 282 Pfam PF03743 Bacterial conjugation TrbI-like protein 88 273 9.1E-58 T 15-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI D934_03340 12000b0d9301eb025d00255297da3d60 97 ProSitePatterns PS00323 Ribosomal protein S19 signature. 59 83 - T 15-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03340 12000b0d9301eb025d00255297da3d60 97 Gene3D G3DSA:3.30.860.10 9 97 4.5E-36 T 15-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03340 12000b0d9301eb025d00255297da3d60 97 PRINTS PR00975 Ribosomal protein S19 family signature 59 71 8.0E-20 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03340 12000b0d9301eb025d00255297da3d60 97 PRINTS PR00975 Ribosomal protein S19 family signature 71 86 8.0E-20 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03340 12000b0d9301eb025d00255297da3d60 97 PRINTS PR00975 Ribosomal protein S19 family signature 39 58 8.0E-20 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03340 12000b0d9301eb025d00255297da3d60 97 SUPERFAMILY SSF54570 11 90 9.29E-32 T 15-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03340 12000b0d9301eb025d00255297da3d60 97 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 9 95 23.941 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03340 12000b0d9301eb025d00255297da3d60 97 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 9 95 1.3E-37 T 15-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 D934_03340 12000b0d9301eb025d00255297da3d60 97 PIRSF PIRSF002144 1 97 1.7E-32 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03340 12000b0d9301eb025d00255297da3d60 97 Pfam PF00203 Ribosomal protein S19 11 89 8.1E-34 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03585 da32b772dfe00c1548ef25bd4d9f8b6b 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 4.2E-26 T 15-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03585 da32b772dfe00c1548ef25bd4d9f8b6b 78 SUPERFAMILY SSF143800 2 77 6.87E-31 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03585 da32b772dfe00c1548ef25bd4d9f8b6b 78 Pfam PF00830 Ribosomal L28 family 3 62 1.2E-26 T 15-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03585 da32b772dfe00c1548ef25bd4d9f8b6b 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.386 T 15-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03585 da32b772dfe00c1548ef25bd4d9f8b6b 78 Gene3D G3DSA:2.30.170.40 2 78 4.4E-34 T 15-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_06165 15a44d2bbfb66511471af0f8b6512090 472 Gene3D G3DSA:3.40.50.10810 4 229 6.8E-23 T 15-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily D934_06165 15a44d2bbfb66511471af0f8b6512090 472 SUPERFAMILY SSF52540 117 455 2.63E-26 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_06165 15a44d2bbfb66511471af0f8b6512090 472 Gene3D G3DSA:3.40.50.300 243 470 2.0E-17 T 15-10-2018 D934_06165 15a44d2bbfb66511471af0f8b6512090 472 SUPERFAMILY SSF52540 2 202 5.52E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_06165 15a44d2bbfb66511471af0f8b6512090 472 SMART SM00487 2 188 3.9E-7 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_06165 15a44d2bbfb66511471af0f8b6512090 472 Pfam PF00176 SNF2 family N-terminal domain 25 265 2.4E-16 T 15-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 D934_06985 15a44d2bbfb66511471af0f8b6512090 472 Gene3D G3DSA:3.40.50.10810 4 229 6.8E-23 T 15-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily D934_06985 15a44d2bbfb66511471af0f8b6512090 472 SUPERFAMILY SSF52540 117 455 2.63E-26 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_06985 15a44d2bbfb66511471af0f8b6512090 472 Gene3D G3DSA:3.40.50.300 243 470 2.0E-17 T 15-10-2018 D934_06985 15a44d2bbfb66511471af0f8b6512090 472 SUPERFAMILY SSF52540 2 202 5.52E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_06985 15a44d2bbfb66511471af0f8b6512090 472 SMART SM00487 2 188 3.9E-7 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_06985 15a44d2bbfb66511471af0f8b6512090 472 Pfam PF00176 SNF2 family N-terminal domain 25 265 2.4E-16 T 15-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 D934_03240 b1e59f6c81e465e6f5be0f0c1d27c0fd 189 SUPERFAMILY SSF52218 3 186 1.26E-45 T 15-10-2018 IPR029039 Flavoprotein-like superfamily D934_03240 b1e59f6c81e465e6f5be0f0c1d27c0fd 189 Pfam PF03358 NADPH-dependent FMN reductase 46 123 1.3E-10 T 15-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 D934_03240 b1e59f6c81e465e6f5be0f0c1d27c0fd 189 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 15-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 D934_03240 b1e59f6c81e465e6f5be0f0c1d27c0fd 189 Gene3D G3DSA:3.40.50.360 2 188 1.0E-54 T 15-10-2018 IPR029039 Flavoprotein-like superfamily D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 Gene3D G3DSA:2.60.40.1730 77 263 4.3E-58 T 15-10-2018 D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 Pfam PF01433 Peptidase family M1 domain 273 486 5.8E-49 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 202 217 1.2E-16 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 367 379 1.2E-16 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 247 262 1.2E-16 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 321 331 1.2E-16 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 348 363 1.2E-16 T 15-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 Gene3D G3DSA:1.10.1740.60 264 360 1.5E-43 T 15-10-2018 D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 SUPERFAMILY SSF55486 269 511 9.08E-67 T 15-10-2018 D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 Gene3D G3DSA:1.10.390.10 361 515 2.0E-44 T 15-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 Gene3D G3DSA:1.25.40.320 517 657 9.3E-40 T 15-10-2018 IPR038502 Peptidase M1 LTA-4 hydrolase/aminopeptidase, C-terminal domain superfamily D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 545 655 1.9E-27 T 15-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 SUPERFAMILY SSF63737 66 264 2.22E-39 T 15-10-2018 D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 SMART SM01263 517 656 1.8E-49 T 15-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 D934_10630 e9c0601be978ed96d214b5dbb83269d5 671 SUPERFAMILY SSF48371 523 656 7.48E-39 T 15-10-2018 IPR016024 Armadillo-type fold D934_05415 d7b7c2ba8817d482c4a587d2ab83c5a0 324 PIRSF PIRSF005303 1 322 5.8E-80 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 D934_05415 d7b7c2ba8817d482c4a587d2ab83c5a0 324 SUPERFAMILY SSF56042 141 305 5.08E-33 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D934_05415 d7b7c2ba8817d482c4a587d2ab83c5a0 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 322 26.311 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 D934_05415 d7b7c2ba8817d482c4a587d2ab83c5a0 324 SUPERFAMILY SSF55326 2 135 1.38E-33 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D934_05415 d7b7c2ba8817d482c4a587d2ab83c5a0 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 135 1.1E-20 T 15-10-2018 IPR016188 PurM-like, N-terminal domain D934_05415 d7b7c2ba8817d482c4a587d2ab83c5a0 324 Gene3D G3DSA:3.90.650.10 143 323 2.7E-48 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D934_05415 d7b7c2ba8817d482c4a587d2ab83c5a0 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 198 301 1.4E-5 T 15-10-2018 IPR010918 PurM-like, C-terminal domain D934_05415 d7b7c2ba8817d482c4a587d2ab83c5a0 324 Gene3D G3DSA:3.30.1330.10 1 141 3.5E-42 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D934_05415 d7b7c2ba8817d482c4a587d2ab83c5a0 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 322 1.5E-114 T 15-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 D934_06040 3a941abe1bf5c913eea9a7ff060dc985 504 Pfam PF13360 PQQ-like domain 292 386 4.7E-9 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat D934_06040 3a941abe1bf5c913eea9a7ff060dc985 504 Pfam PF13360 PQQ-like domain 3 169 2.5E-17 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat D934_06040 3a941abe1bf5c913eea9a7ff060dc985 504 SUPERFAMILY SSF50998 273 384 8.11E-16 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily D934_06040 3a941abe1bf5c913eea9a7ff060dc985 504 SMART SM00564 62 94 0.13 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D934_06040 3a941abe1bf5c913eea9a7ff060dc985 504 SMART SM00564 324 355 1.5 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D934_06040 3a941abe1bf5c913eea9a7ff060dc985 504 SMART SM00564 155 198 760.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D934_06040 3a941abe1bf5c913eea9a7ff060dc985 504 SMART SM00564 107 142 12.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D934_06040 3a941abe1bf5c913eea9a7ff060dc985 504 SMART SM00564 256 307 0.84 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D934_06040 3a941abe1bf5c913eea9a7ff060dc985 504 SMART SM00564 15 46 0.032 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D934_06040 3a941abe1bf5c913eea9a7ff060dc985 504 Gene3D G3DSA:2.130.10.10 1 287 2.1E-37 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D934_06040 3a941abe1bf5c913eea9a7ff060dc985 504 SUPERFAMILY SSF50998 2 280 2.88E-38 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily D934_06040 3a941abe1bf5c913eea9a7ff060dc985 504 Gene3D G3DSA:2.140.10.10 288 440 3.2E-10 T 15-10-2018 D934_02415 73e564ad0679066fbc73bdaea337cc80 389 Pfam PF07396 Phosphate-selective porin O and P 41 389 4.5E-97 T 15-10-2018 IPR010870 Phosphate-selective porin O/P D934_02415 73e564ad0679066fbc73bdaea337cc80 389 Gene3D G3DSA:2.40.160.10 31 389 1.6E-73 T 15-10-2018 IPR023614 Porin domain superfamily D934_02415 73e564ad0679066fbc73bdaea337cc80 389 SUPERFAMILY SSF56935 41 382 7.02E-11 T 15-10-2018 D934_05500 f7fae55686d46a0245d17d7b406f5637 617 Pfam PF02421 Ferrous iron transport protein B 7 166 9.6E-54 T 15-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 D934_05500 f7fae55686d46a0245d17d7b406f5637 617 Gene3D G3DSA:3.40.50.300 6 204 1.4E-42 T 15-10-2018 D934_05500 f7fae55686d46a0245d17d7b406f5637 617 SUPERFAMILY SSF52540 6 173 2.86E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_05500 f7fae55686d46a0245d17d7b406f5637 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 29 47 9.7E-7 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_05500 f7fae55686d46a0245d17d7b406f5637 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 8 28 9.7E-7 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_05500 f7fae55686d46a0245d17d7b406f5637 617 Pfam PF07664 Ferrous iron transport protein B C terminus 396 448 1.7E-14 T 15-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 D934_05500 f7fae55686d46a0245d17d7b406f5637 617 Pfam PF07670 Nucleoside recognition 284 378 1.6E-11 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 D934_05500 f7fae55686d46a0245d17d7b406f5637 617 Pfam PF07670 Nucleoside recognition 453 586 4.3E-24 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 D934_10875 02e90648460070689568c871a0d20507 442 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 19 429 9.0E-119 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D934_10875 02e90648460070689568c871a0d20507 442 Gene3D G3DSA:3.65.10.10 27 236 6.8E-148 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 D934_10875 02e90648460070689568c871a0d20507 442 PIRSF PIRSF000505 7 438 2.1E-117 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D934_10875 02e90648460070689568c871a0d20507 442 SUPERFAMILY SSF55205 9 432 3.43E-125 T 15-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 D934_10875 02e90648460070689568c871a0d20507 442 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 15 434 31.756 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D934_10875 02e90648460070689568c871a0d20507 442 ProSitePatterns PS00885 EPSP synthase signature 2. 346 364 - T 15-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D934_10875 02e90648460070689568c871a0d20507 442 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 13 425 2.1E-114 T 15-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 D934_10875 02e90648460070689568c871a0d20507 442 Gene3D G3DSA:3.65.10.10 19 424 6.8E-148 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 D934_10875 02e90648460070689568c871a0d20507 442 ProSitePatterns PS00104 EPSP synthase signature 1. 94 108 - T 15-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D934_03870 ac441c0abc6c70549c6cc49573b263a9 92 Gene3D G3DSA:3.30.70.260 4 92 3.6E-11 T 15-10-2018 D934_03870 ac441c0abc6c70549c6cc49573b263a9 92 Pfam PF04359 Protein of unknown function (DUF493) 11 92 1.1E-17 T 15-10-2018 IPR007454 Uncharacterised protein family UPF0250 D934_03870 ac441c0abc6c70549c6cc49573b263a9 92 SUPERFAMILY SSF117991 7 92 5.36E-17 T 15-10-2018 IPR027471 YbeD-like domain superfamily D934_09515 0b208f0380f7b82c3bca6ae3097dd265 186 SMART SM00507 78 131 6.8E-13 T 15-10-2018 IPR003615 HNH nuclease D934_09515 0b208f0380f7b82c3bca6ae3097dd265 186 Pfam PF14279 HNH endonuclease 91 145 1.9E-15 T 15-10-2018 IPR029471 HNH endonuclease 5 D934_09515 0b208f0380f7b82c3bca6ae3097dd265 186 Gene3D G3DSA:3.30.40.60 74 163 4.1E-22 T 15-10-2018 D934_10165 569165cce0c831d6c4905cf3e1618585 139 PIRSF PIRSF037087 1 139 3.8E-80 T 15-10-2018 IPR017102 Uncharacterised conserved protein UCP037087 D934_10165 569165cce0c831d6c4905cf3e1618585 139 Gene3D G3DSA:2.60.120.10 13 134 2.6E-20 T 15-10-2018 IPR014710 RmlC-like jelly roll fold D934_10165 569165cce0c831d6c4905cf3e1618585 139 SUPERFAMILY SSF51182 10 133 1.29E-24 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily D934_10165 569165cce0c831d6c4905cf3e1618585 139 Pfam PF07883 Cupin domain 47 117 1.6E-18 T 15-10-2018 IPR013096 Cupin 2, conserved barrel D934_04180 5f4e87d2d48702b3cbffeab67982593a 267 Gene3D G3DSA:3.20.20.380 26 266 2.0E-79 T 15-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 D934_04180 5f4e87d2d48702b3cbffeab67982593a 267 Pfam PF03932 CutC family 28 226 9.1E-86 T 15-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 D934_04180 5f4e87d2d48702b3cbffeab67982593a 267 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 26 228 29.211 T 15-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 D934_04180 5f4e87d2d48702b3cbffeab67982593a 267 SUPERFAMILY SSF110395 28 263 2.75E-67 T 15-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 D934_08050 43ad825b2a6dc0a8c21d9fa73e993486 101 Gene3D G3DSA:3.30.750.24 6 101 9.8E-9 T 15-10-2018 IPR036513 STAS domain superfamily D934_08050 43ad825b2a6dc0a8c21d9fa73e993486 101 SUPERFAMILY SSF52091 1 99 2.55E-11 T 15-10-2018 IPR036513 STAS domain superfamily D934_08050 43ad825b2a6dc0a8c21d9fa73e993486 101 Pfam PF13466 STAS domain 14 93 1.3E-11 T 15-10-2018 IPR002645 STAS domain D934_10420 e4f35015ab242106e042d499a5d5f036 1612 SUPERFAMILY SSF101967 760 873 4.05E-10 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:2.150.10.10 105 298 7.6E-23 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:2.150.10.10 1430 1515 7.9E-28 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:2.150.10.10 1282 1429 1.7E-25 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_10420 e4f35015ab242106e042d499a5d5f036 1612 SUPERFAMILY SSF54523 1508 1612 8.79E-23 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 SUPERFAMILY SSF101967 1288 1406 9.29E-16 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 SUPERFAMILY SSF101967 537 650 2.75E-10 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:2.20.25.490 299 354 4.0E-16 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:2.20.25.490 964 1023 9.4E-16 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:2.20.25.490 1133 1192 6.3E-16 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:2.20.25.490 741 800 1.7E-15 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:2.20.25.490 518 577 3.3E-15 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 946 986 1.1E-9 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 278 318 4.5E-6 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1115 1155 1.2E-13 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1497 1529 8.2E-10 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1241 1280 4.1E-10 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 403 440 1.0E-10 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1383 1418 5.8E-8 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 849 886 1.0E-10 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 500 540 1.1E-9 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 626 663 1.0E-10 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 723 763 1.1E-9 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 SUPERFAMILY SSF101967 305 427 9.02E-13 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:1.20.5.170 408 448 2.1E-8 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:1.20.5.170 631 671 2.1E-8 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:1.20.5.170 854 894 2.1E-8 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 SUPERFAMILY SSF101967 1439 1518 1.83E-23 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 SUPERFAMILY SSF101967 1020 1138 2.35E-10 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 SUPERFAMILY SSF101967 1151 1263 6.15E-11 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1320 1345 2.5E-6 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF05658 Head domain of trimeric autotransporter adhesin 161 187 3.5E-5 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1441 1465 1.1E-6 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Pfam PF03895 YadA-like membrane anchor domain 1552 1612 1.4E-16 T 15-10-2018 IPR005594 YadA-like, C-terminal D934_10420 e4f35015ab242106e042d499a5d5f036 1612 SUPERFAMILY SSF101967 132 299 1.31E-12 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:3.30.390.90 367 407 4.1E-12 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:3.30.390.90 1208 1245 6.4E-12 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:3.30.390.90 1075 1120 9.8E-9 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:3.30.390.90 813 853 5.0E-12 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:3.30.390.90 590 630 5.0E-12 T 15-10-2018 D934_10420 e4f35015ab242106e042d499a5d5f036 1612 Gene3D G3DSA:3.30.1300.30 1516 1612 1.1E-29 T 15-10-2018 D934_06895 40d156842215eb6a640bca4be3128ceb 305 Gene3D G3DSA:3.30.160.40 220 303 1.3E-19 T 15-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_06895 40d156842215eb6a640bca4be3128ceb 305 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 5.7E-100 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_06895 40d156842215eb6a640bca4be3128ceb 305 SUPERFAMILY SSF54782 218 303 8.76E-20 T 15-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_06895 40d156842215eb6a640bca4be3128ceb 305 SUPERFAMILY SSF53850 3 215 2.5E-78 T 15-10-2018 D934_06895 40d156842215eb6a640bca4be3128ceb 305 Gene3D G3DSA:3.40.190.10 4 208 2.0E-77 T 15-10-2018 D934_06895 40d156842215eb6a640bca4be3128ceb 305 Gene3D G3DSA:3.40.190.10 101 200 2.0E-77 T 15-10-2018 D934_06895 40d156842215eb6a640bca4be3128ceb 305 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 36.256 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_06895 40d156842215eb6a640bca4be3128ceb 305 PIRSF PIRSF001438 1 305 9.7E-108 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_06895 40d156842215eb6a640bca4be3128ceb 305 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 4.6E-11 T 15-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_06895 40d156842215eb6a640bca4be3128ceb 305 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 2.0E-40 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_06895 40d156842215eb6a640bca4be3128ceb 305 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 2.0E-40 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_06895 40d156842215eb6a640bca4be3128ceb 305 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 2.0E-40 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_06895 40d156842215eb6a640bca4be3128ceb 305 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 2.0E-40 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_06895 40d156842215eb6a640bca4be3128ceb 305 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 2.0E-40 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_06895 40d156842215eb6a640bca4be3128ceb 305 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 4.5E-72 T 15-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_06895 40d156842215eb6a640bca4be3128ceb 305 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 15-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 SUPERFAMILY SSF55874 206 361 1.96E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 SUPERFAMILY SSF47384 145 213 1.31E-6 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 Gene3D G3DSA:3.40.50.2300 10 138 2.2E-17 T 15-10-2018 D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 Gene3D G3DSA:3.40.50.2300 379 498 5.6E-11 T 15-10-2018 D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 Pfam PF00072 Response regulator receiver domain 383 492 1.5E-6 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 Pfam PF00072 Response regulator receiver domain 13 119 1.2E-11 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 259 361 4.5E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 SUPERFAMILY SSF52172 379 497 2.42E-14 T 15-10-2018 IPR011006 CheY-like superfamily D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 SMART SM00387 256 363 4.2E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 SMART SM00448 381 493 0.005 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 SMART SM00448 11 122 6.9E-13 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 341 3.5E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 308 3.5E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 360 3.5E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 322 3.5E-18 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 Gene3D G3DSA:3.30.565.10 216 372 9.5E-38 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 SUPERFAMILY SSF52172 11 143 1.35E-20 T 15-10-2018 IPR011006 CheY-like superfamily D934_04910 615c01c0bfaa225cc1863dae06caf9ec 498 Gene3D G3DSA:1.10.287.130 139 212 1.7E-8 T 15-10-2018 D934_03025 e159ecdedaffa26346debcd7cfc289a0 158 SMART SM00855 3 114 2.4E-8 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D934_03025 e159ecdedaffa26346debcd7cfc289a0 158 Gene3D G3DSA:3.40.50.1240 1 158 2.9E-37 T 15-10-2018 IPR029033 Histidine phosphatase superfamily D934_03025 e159ecdedaffa26346debcd7cfc289a0 158 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 92 1.6E-12 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D934_03025 e159ecdedaffa26346debcd7cfc289a0 158 SUPERFAMILY SSF53254 1 141 5.27E-26 T 15-10-2018 IPR029033 Histidine phosphatase superfamily D934_07440 eecdb9b89f741213d7768c0b0c8a34f0 335 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 8 167 3.7E-67 T 15-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D934_07440 eecdb9b89f741213d7768c0b0c8a34f0 335 Gene3D G3DSA:1.10.3730.40 173 329 1.3E-70 T 15-10-2018 D934_07440 eecdb9b89f741213d7768c0b0c8a34f0 335 SUPERFAMILY SSF51735 7 173 1.41E-61 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_07440 eecdb9b89f741213d7768c0b0c8a34f0 335 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 319 42.205 T 15-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D934_07440 eecdb9b89f741213d7768c0b0c8a34f0 335 PIRSF PIRSF000116 192 323 4.3E-13 T 15-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D934_07440 eecdb9b89f741213d7768c0b0c8a34f0 335 PIRSF PIRSF000116 2 197 2.7E-40 T 15-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D934_07440 eecdb9b89f741213d7768c0b0c8a34f0 335 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 8 317 2.3E-124 T 15-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D934_07440 eecdb9b89f741213d7768c0b0c8a34f0 335 SUPERFAMILY SSF48179 174 327 1.38E-68 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D934_07440 eecdb9b89f741213d7768c0b0c8a34f0 335 Gene3D G3DSA:3.40.50.720 3 172 6.2E-66 T 15-10-2018 D934_07440 eecdb9b89f741213d7768c0b0c8a34f0 335 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 174 317 1.8E-63 T 15-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D934_08545 c2f449923a9d8bf69b5f59096743c786 402 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 11 175 3.3E-62 T 15-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 D934_08545 c2f449923a9d8bf69b5f59096743c786 402 PIRSF PIRSF029215 1 402 7.1E-142 T 15-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 D934_06655 c2f449923a9d8bf69b5f59096743c786 402 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 11 175 3.3E-62 T 15-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 D934_06655 c2f449923a9d8bf69b5f59096743c786 402 PIRSF PIRSF029215 1 402 7.1E-142 T 15-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 SUPERFAMILY SSF54980 404 498 1.87E-23 T 15-10-2018 IPR035647 EF-G domain III/V-like D934_05970 52ee0e281e1965be9e561966d0e8be03 602 Pfam PF06421 GTP-binding protein LepA C-terminus 492 598 1.0E-51 T 15-10-2018 IPR013842 GTP-binding protein LepA, C-terminal D934_05970 52ee0e281e1965be9e561966d0e8be03 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site D934_05970 52ee0e281e1965be9e561966d0e8be03 602 Pfam PF00009 Elongation factor Tu GTP binding domain 8 186 1.3E-51 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 Gene3D G3DSA:3.30.70.3380 373 483 1.5E-37 T 15-10-2018 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 Hamap MF_00071 Elongation factor 4 [lepA]. 1 602 293.178 T 15-10-2018 IPR006297 Elongation factor 4 GO:0005525 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.3E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 PRINTS PR00315 GTP-binding elongation factor signature 11 24 2.3E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 PRINTS PR00315 GTP-binding elongation factor signature 79 89 2.3E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 PRINTS PR00315 GTP-binding elongation factor signature 54 62 2.3E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 PRINTS PR00315 GTP-binding elongation factor signature 95 106 2.3E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 Gene3D G3DSA:3.30.70.870 291 372 1.9E-36 T 15-10-2018 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 150 2.2E-15 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 Gene3D G3DSA:2.40.30.10 192 290 2.4E-30 T 15-10-2018 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 SUPERFAMILY SSF50447 171 293 5.89E-27 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D934_05970 52ee0e281e1965be9e561966d0e8be03 602 SUPERFAMILY SSF52540 5 206 7.53E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_05970 52ee0e281e1965be9e561966d0e8be03 602 TIGRFAM TIGR01393 lepA: elongation factor 4 8 600 8.9E-293 T 15-10-2018 IPR006297 Elongation factor 4 GO:0005525 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 SMART SM00838 403 491 0.0018 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like D934_05970 52ee0e281e1965be9e561966d0e8be03 602 Gene3D G3DSA:3.40.50.300 6 190 3.1E-70 T 15-10-2018 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 Pfam PF03144 Elongation factor Tu domain 2 210 280 2.8E-8 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D934_05970 52ee0e281e1965be9e561966d0e8be03 602 Pfam PF00679 Elongation factor G C-terminus 404 484 5.5E-19 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like D934_05970 52ee0e281e1965be9e561966d0e8be03 602 SUPERFAMILY SSF54980 297 375 6.83E-19 T 15-10-2018 IPR035647 EF-G domain III/V-like D934_05970 52ee0e281e1965be9e561966d0e8be03 602 Gene3D G3DSA:3.30.70.2570 485 558 3.0E-32 T 15-10-2018 IPR038363 LepA, C-terminal domain superfamily D934_01315 67eea6cb0cdc261ba2293eb1dca2dee4 101 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 5 100 2.1E-23 T 15-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 D934_01315 67eea6cb0cdc261ba2293eb1dca2dee4 101 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 100 6.0E-47 T 15-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 D934_01315 67eea6cb0cdc261ba2293eb1dca2dee4 101 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 88 5.1E-18 T 15-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 D934_01315 67eea6cb0cdc261ba2293eb1dca2dee4 101 SMART SM01103 5 88 5.5E-33 T 15-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 D934_01315 67eea6cb0cdc261ba2293eb1dca2dee4 101 SUPERFAMILY SSF75471 4 96 1.96E-25 T 15-10-2018 IPR035920 YhbY-like superfamily D934_01315 67eea6cb0cdc261ba2293eb1dca2dee4 101 Gene3D G3DSA:3.30.110.60 3 101 2.6E-28 T 15-10-2018 IPR035920 YhbY-like superfamily D934_09985 9d205229a1ddf45f6085ceb60b68be3c 99 Pfam PF05164 Cell division protein ZapA 7 91 7.6E-18 T 15-10-2018 IPR007838 Cell division protein ZapA-like D934_09985 9d205229a1ddf45f6085ceb60b68be3c 99 Gene3D G3DSA:1.10.20.30 1 48 1.7E-16 T 15-10-2018 D934_09985 9d205229a1ddf45f6085ceb60b68be3c 99 SUPERFAMILY SSF102829 7 95 5.89E-23 T 15-10-2018 IPR036192 Cell division protein ZapA-like superfamily D934_05380 dd7cf9b66fbaedfd066fa2161218df36 208 Gene3D G3DSA:3.30.70.260 118 204 1.6E-15 T 15-10-2018 D934_05380 dd7cf9b66fbaedfd066fa2161218df36 208 Pfam PF13740 ACT domain 36 109 2.2E-15 T 15-10-2018 D934_05380 dd7cf9b66fbaedfd066fa2161218df36 208 SUPERFAMILY SSF55021 33 114 3.0E-8 T 15-10-2018 D934_05380 dd7cf9b66fbaedfd066fa2161218df36 208 SUPERFAMILY SSF55021 119 207 6.7E-18 T 15-10-2018 D934_05380 dd7cf9b66fbaedfd066fa2161218df36 208 Gene3D G3DSA:3.30.70.260 50 116 4.4E-8 T 15-10-2018 D934_05380 dd7cf9b66fbaedfd066fa2161218df36 208 PIRSF PIRSF028103 33 208 4.3E-73 T 15-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 D934_13610 200cb8a78ff86110d7e2be4f4b7ff6f9 246 SMART SM00382 58 229 5.1E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_13610 200cb8a78ff86110d7e2be4f4b7ff6f9 246 SUPERFAMILY SSF52540 47 242 2.03E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_13610 200cb8a78ff86110d7e2be4f4b7ff6f9 246 Pfam PF00005 ABC transporter 49 181 1.1E-15 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_13610 200cb8a78ff86110d7e2be4f4b7ff6f9 246 Gene3D G3DSA:3.40.50.300 4 245 2.0E-36 T 15-10-2018 D934_11110 3381d5d4bc0a41a8e20f45d416e7dd74 411 SUPERFAMILY SSF111369 63 299 9.15E-57 T 15-10-2018 D934_11110 3381d5d4bc0a41a8e20f45d416e7dd74 411 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 294 2.8E-18 T 15-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D934_11110 3381d5d4bc0a41a8e20f45d416e7dd74 411 Gene3D G3DSA:1.10.287.470 108 181 2.6E-86 T 15-10-2018 D934_11110 3381d5d4bc0a41a8e20f45d416e7dd74 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 374 2.9E-81 T 15-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D934_11110 3381d5d4bc0a41a8e20f45d416e7dd74 411 Gene3D G3DSA:2.40.50.100 73 215 2.6E-86 T 15-10-2018 D934_11110 3381d5d4bc0a41a8e20f45d416e7dd74 411 Gene3D G3DSA:2.40.420.20 305 374 2.6E-86 T 15-10-2018 D934_11110 3381d5d4bc0a41a8e20f45d416e7dd74 411 Gene3D G3DSA:2.40.30.170 60 304 2.6E-86 T 15-10-2018 D934_10560 54a3cd11e238c5fd1feb4001df835b0d 99 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 63 17.651 T 15-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_10560 54a3cd11e238c5fd1feb4001df835b0d 99 SMART SM01409 8 62 1.1E-16 T 15-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 D934_10560 54a3cd11e238c5fd1feb4001df835b0d 99 Gene3D G3DSA:3.90.940.10 1 94 7.5E-28 T 15-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 D934_10560 54a3cd11e238c5fd1feb4001df835b0d 99 SUPERFAMILY SSF63562 1 77 1.05E-24 T 15-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 D934_10560 54a3cd11e238c5fd1feb4001df835b0d 99 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 61 1.1E-20 T 15-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D934_10560 54a3cd11e238c5fd1feb4001df835b0d 99 Pfam PF01192 RNA polymerase Rpb6 8 60 2.4E-16 T 15-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 883 184.548 T 15-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 SMART SM00863 661 703 2.5E-19 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 Gene3D G3DSA:3.30.54.20 632 684 1.2E-47 T 15-10-2018 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 SUPERFAMILY SSF55681 7 257 1.44E-106 T 15-10-2018 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 Gene3D G3DSA:3.30.980.10 571 704 1.2E-47 T 15-10-2018 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 SUPERFAMILY SSF50447 459 558 2.26E-16 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D934_01440 87183da3a0e29ca06ef29b68724d5378 884 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 661 703 7.8E-17 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 Pfam PF02272 DHHA1 domain 740 879 1.8E-23 T 15-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 11 862 4.8E-294 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 80 91 2.0E-30 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 284 300 2.0E-30 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 308 321 2.0E-30 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 238 251 2.0E-30 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 211 222 2.0E-30 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 SUPERFAMILY SSF101353 258 448 6.93E-57 T 15-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 Gene3D G3DSA:3.30.930.10 7 254 4.0E-118 T 15-10-2018 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 Pfam PF01411 tRNA synthetases class II (A) 11 560 2.5E-211 T 15-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 SUPERFAMILY SSF55186 562 719 1.7E-48 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 Gene3D G3DSA:2.40.30.130 476 560 1.2E-8 T 15-10-2018 D934_01440 87183da3a0e29ca06ef29b68724d5378 884 Gene3D G3DSA:3.10.310.40 772 880 8.2E-22 T 15-10-2018 D934_07785 f3d7f9aa23c55d811aabc9a9c676777e 86 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 1 77 9.3E-13 T 15-10-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 D934_09005 f3d7f9aa23c55d811aabc9a9c676777e 86 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 1 77 9.3E-13 T 15-10-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 D934_01630 44cd6c96f863dcb0242d0eb3166b3cb4 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 257 1.5E-14 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase D934_01630 44cd6c96f863dcb0242d0eb3166b3cb4 266 SUPERFAMILY SSF56219 1 264 1.7E-71 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D934_01630 44cd6c96f863dcb0242d0eb3166b3cb4 266 Gene3D G3DSA:3.60.10.10 1 265 3.3E-76 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D934_01630 44cd6c96f863dcb0242d0eb3166b3cb4 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 263 3.9E-68 T 15-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 D934_01630 44cd6c96f863dcb0242d0eb3166b3cb4 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 263 2.2E-61 T 15-10-2018 D934_03255 1c25c61164950af47b3dd83b3ef9dc60 229 SUPERFAMILY SSF52317 6 225 4.19E-67 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_03255 1c25c61164950af47b3dd83b3ef9dc60 229 Gene3D G3DSA:3.40.50.880 1 229 3.1E-68 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_03255 1c25c61164950af47b3dd83b3ef9dc60 229 Pfam PF01965 DJ-1/PfpI family 26 222 1.8E-14 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 D934_01255 3fbf6ed7108bc47ba5173b9c1797225e 266 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 31 167 7.2E-48 T 15-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 D934_01255 3fbf6ed7108bc47ba5173b9c1797225e 266 SUPERFAMILY SSF49354 27 166 2.24E-43 T 15-10-2018 IPR008962 PapD-like superfamily D934_01255 3fbf6ed7108bc47ba5173b9c1797225e 266 Gene3D G3DSA:2.60.40.10 33 167 2.8E-45 T 15-10-2018 IPR013783 Immunoglobulin-like fold D934_01255 3fbf6ed7108bc47ba5173b9c1797225e 266 PRINTS PR00969 Pili chaperone signature 184 199 9.5E-36 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D934_01255 3fbf6ed7108bc47ba5173b9c1797225e 266 PRINTS PR00969 Pili chaperone signature 110 127 9.5E-36 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D934_01255 3fbf6ed7108bc47ba5173b9c1797225e 266 PRINTS PR00969 Pili chaperone signature 81 102 9.5E-36 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D934_01255 3fbf6ed7108bc47ba5173b9c1797225e 266 PRINTS PR00969 Pili chaperone signature 148 163 9.5E-36 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D934_01255 3fbf6ed7108bc47ba5173b9c1797225e 266 PRINTS PR00969 Pili chaperone signature 32 41 9.5E-36 T 15-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 D934_01255 3fbf6ed7108bc47ba5173b9c1797225e 266 SUPERFAMILY SSF49584 160 258 1.44E-15 T 15-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily D934_01255 3fbf6ed7108bc47ba5173b9c1797225e 266 Gene3D G3DSA:2.60.40.10 169 265 3.1E-17 T 15-10-2018 IPR013783 Immunoglobulin-like fold D934_01255 3fbf6ed7108bc47ba5173b9c1797225e 266 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 109 126 - T 15-10-2018 IPR018046 Pili assembly chaperone, conserved site D934_01255 3fbf6ed7108bc47ba5173b9c1797225e 266 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 189 256 1.2E-14 T 15-10-2018 IPR016148 Pili assembly chaperone, C-terminal D934_01410 de3e4fbf2daec5fe85535e5447e494b6 563 SUPERFAMILY SSF56235 1 198 1.2E-56 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D934_01410 de3e4fbf2daec5fe85535e5447e494b6 563 Pfam PF13537 Glutamine amidotransferase domain 50 169 1.0E-40 T 15-10-2018 IPR017932 Glutamine amidotransferase type 2 domain D934_01410 de3e4fbf2daec5fe85535e5447e494b6 563 SUPERFAMILY SSF52402 212 487 2.33E-73 T 15-10-2018 D934_01410 de3e4fbf2daec5fe85535e5447e494b6 563 SMART SM01172 5 210 0.004 T 15-10-2018 IPR024286 Domain of unknown function DUF3700 D934_01410 de3e4fbf2daec5fe85535e5447e494b6 563 Gene3D G3DSA:3.40.50.620 198 522 2.4E-106 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_01410 de3e4fbf2daec5fe85535e5447e494b6 563 PIRSF PIRSF001589 365 523 3.2E-28 T 15-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 D934_01410 de3e4fbf2daec5fe85535e5447e494b6 563 PIRSF PIRSF001589 1 370 2.5E-108 T 15-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 D934_01410 de3e4fbf2daec5fe85535e5447e494b6 563 Pfam PF00733 Asparagine synthase 214 370 2.9E-56 T 15-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 D934_01410 de3e4fbf2daec5fe85535e5447e494b6 563 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 374 4.5E-107 T 15-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 D934_01410 de3e4fbf2daec5fe85535e5447e494b6 563 Gene3D G3DSA:3.60.20.10 2 196 1.1E-63 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D934_11075 8c4241dac0d3e4d6a8de700fd2573b56 270 Pfam PF10531 SLBB domain 165 217 8.2E-10 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_11075 8c4241dac0d3e4d6a8de700fd2573b56 270 Gene3D G3DSA:3.10.560.10 150 246 3.5E-16 T 15-10-2018 D934_11075 8c4241dac0d3e4d6a8de700fd2573b56 270 Pfam PF02563 Polysaccharide biosynthesis/export protein 84 158 2.0E-18 T 15-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 D934_11680 75db58c6887619522e793339d1e52d07 437 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 8.7E-27 T 15-10-2018 D934_11680 75db58c6887619522e793339d1e52d07 437 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 8.7E-27 T 15-10-2018 D934_11680 75db58c6887619522e793339d1e52d07 437 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 8.7E-27 T 15-10-2018 D934_11680 75db58c6887619522e793339d1e52d07 437 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 8.7E-27 T 15-10-2018 D934_11680 75db58c6887619522e793339d1e52d07 437 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 8.7E-27 T 15-10-2018 D934_11680 75db58c6887619522e793339d1e52d07 437 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 8.7E-27 T 15-10-2018 D934_11680 75db58c6887619522e793339d1e52d07 437 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 8.7E-27 T 15-10-2018 D934_11680 75db58c6887619522e793339d1e52d07 437 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 8.7E-27 T 15-10-2018 D934_11680 75db58c6887619522e793339d1e52d07 437 Gene3D G3DSA:1.10.3860.10 2 422 1.2E-116 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D934_11680 75db58c6887619522e793339d1e52d07 437 Pfam PF00375 Sodium:dicarboxylate symporter family 13 415 6.7E-112 T 15-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 D934_11680 75db58c6887619522e793339d1e52d07 437 SUPERFAMILY SSF118215 12 415 1.7E-100 T 15-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D934_03165 7eff02d06cc9704a97f280d2926546c2 468 Pfam PF08245 Mur ligase middle domain 120 289 5.8E-24 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D934_03165 7eff02d06cc9704a97f280d2926546c2 468 Gene3D G3DSA:3.40.1190.10 111 308 1.1E-40 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D934_03165 7eff02d06cc9704a97f280d2926546c2 468 SUPERFAMILY SSF53623 118 303 5.15E-40 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D934_03165 7eff02d06cc9704a97f280d2926546c2 468 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 450 9.1E-81 T 15-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D934_03165 7eff02d06cc9704a97f280d2926546c2 468 Gene3D G3DSA:3.40.50.720 5 97 3.2E-5 T 15-10-2018 D934_03165 7eff02d06cc9704a97f280d2926546c2 468 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 455 26.054 T 15-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D934_03165 7eff02d06cc9704a97f280d2926546c2 468 Gene3D G3DSA:3.90.190.20 310 452 2.0E-28 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D934_03165 7eff02d06cc9704a97f280d2926546c2 468 SUPERFAMILY SSF53244 310 450 1.8E-26 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D934_00900 730b9f1e1c999d360965828b1f19ca73 565 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 369 549 1.6E-65 T 15-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_00900 730b9f1e1c999d360965828b1f19ca73 565 Gene3D G3DSA:2.70.98.90 73 347 1.7E-69 T 15-10-2018 IPR038221 YidC, periplasmic domain superfamily D934_00900 730b9f1e1c999d360965828b1f19ca73 565 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 552 21.255 T 15-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 D934_00900 730b9f1e1c999d360965828b1f19ca73 565 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 367 2.5E-60 T 15-10-2018 IPR028053 Membrane insertase YidC, N-terminal D934_00900 730b9f1e1c999d360965828b1f19ca73 565 Pfam PF14849 YidC periplasmic domain 77 358 6.0E-65 T 15-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain D934_00900 730b9f1e1c999d360965828b1f19ca73 565 Pfam PF02096 60Kd inner membrane protein 370 549 4.7E-56 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D934_00900 730b9f1e1c999d360965828b1f19ca73 565 PRINTS PR01900 YidC translocation/secretion protein signature 505 529 9.7E-15 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D934_00900 730b9f1e1c999d360965828b1f19ca73 565 PRINTS PR01900 YidC translocation/secretion protein signature 484 499 9.7E-15 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D934_00900 730b9f1e1c999d360965828b1f19ca73 565 PRINTS PR01900 YidC translocation/secretion protein signature 355 371 9.7E-15 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D934_00900 730b9f1e1c999d360965828b1f19ca73 565 PRINTS PR00701 60kDa inner membrane protein signature 2 23 9.6E-48 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D934_00900 730b9f1e1c999d360965828b1f19ca73 565 PRINTS PR00701 60kDa inner membrane protein signature 431 454 9.6E-48 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D934_00900 730b9f1e1c999d360965828b1f19ca73 565 PRINTS PR00701 60kDa inner membrane protein signature 516 539 9.6E-48 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D934_00900 730b9f1e1c999d360965828b1f19ca73 565 PRINTS PR00701 60kDa inner membrane protein signature 172 192 9.6E-48 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D934_00900 730b9f1e1c999d360965828b1f19ca73 565 PRINTS PR00701 60kDa inner membrane protein signature 230 248 9.6E-48 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D934_00900 730b9f1e1c999d360965828b1f19ca73 565 PRINTS PR00701 60kDa inner membrane protein signature 478 500 9.6E-48 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D934_00900 730b9f1e1c999d360965828b1f19ca73 565 PRINTS PR00701 60kDa inner membrane protein signature 264 279 9.6E-48 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D934_08460 4a4bfafb4f00738d13af95c4474edddb 405 Pfam PF02498 BRO family, N-terminal domain 168 253 1.1E-23 T 15-10-2018 IPR003497 BRO N-terminal domain D934_08460 4a4bfafb4f00738d13af95c4474edddb 405 Pfam PF02498 BRO family, N-terminal domain 39 125 8.0E-19 T 15-10-2018 IPR003497 BRO N-terminal domain D934_08460 4a4bfafb4f00738d13af95c4474edddb 405 SMART SM01040 167 253 4.7E-42 T 15-10-2018 IPR003497 BRO N-terminal domain D934_08460 4a4bfafb4f00738d13af95c4474edddb 405 SMART SM01040 38 125 2.9E-27 T 15-10-2018 IPR003497 BRO N-terminal domain D934_06575 4a4bfafb4f00738d13af95c4474edddb 405 Pfam PF02498 BRO family, N-terminal domain 168 253 1.1E-23 T 15-10-2018 IPR003497 BRO N-terminal domain D934_06575 4a4bfafb4f00738d13af95c4474edddb 405 Pfam PF02498 BRO family, N-terminal domain 39 125 8.0E-19 T 15-10-2018 IPR003497 BRO N-terminal domain D934_06575 4a4bfafb4f00738d13af95c4474edddb 405 SMART SM01040 167 253 4.7E-42 T 15-10-2018 IPR003497 BRO N-terminal domain D934_06575 4a4bfafb4f00738d13af95c4474edddb 405 SMART SM01040 38 125 2.9E-27 T 15-10-2018 IPR003497 BRO N-terminal domain D934_00085 6740383ec4ea16bc9725dfec241d0e74 116 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 21 110 1.7E-24 T 15-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 D934_00085 6740383ec4ea16bc9725dfec241d0e74 116 SUPERFAMILY SSF55248 21 113 3.27E-30 T 15-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 D934_00085 6740383ec4ea16bc9725dfec241d0e74 116 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 19 112 22.373 T 15-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 D934_00085 6740383ec4ea16bc9725dfec241d0e74 116 Gene3D G3DSA:3.30.1360.20 20 115 9.1E-29 T 15-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 D934_05645 7de56824d67faab795a238661525d8e7 366 Pfam PF13387 Domain of unknown function (DUF4105) 10 130 4.3E-11 T 15-10-2018 IPR025178 Domain of unknown function DUF4105 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 Pfam PF00575 S1 RNA binding domain 620 691 3.5E-20 T 15-10-2018 IPR003029 S1 domain GO:0003676 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 245 321 1.0E-13 T 15-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 SUPERFAMILY SSF55666 144 235 1.35E-27 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 SMART SM00316 621 691 6.0E-26 T 15-10-2018 IPR022967 RNA-binding domain, S1 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 SUPERFAMILY SSF55666 451 550 1.82E-28 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 Pfam PF00013 KH domain 558 614 6.9E-11 T 15-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 6.9E-20 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 8.1E-20 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 694 30.37 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 Pfam PF03725 3' exoribonuclease family, domain 2 460 528 4.8E-6 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 2.2E-10 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 Gene3D G3DSA:3.30.230.70 1 229 4.9E-78 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 SUPERFAMILY SSF54211 4 143 3.19E-49 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_01990 d70c2c67bcd0aaae845775231b634d13 700 Gene3D G3DSA:2.40.50.140 623 695 6.3E-29 T 15-10-2018 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 PIRSF PIRSF005499 1 699 5.1E-293 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 693 0.0 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 Gene3D G3DSA:3.30.230.70 232 550 2.3E-113 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 SUPERFAMILY SSF54791 553 630 1.52E-17 T 15-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 SUPERFAMILY SSF46915 238 321 3.4E-14 T 15-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 SUPERFAMILY SSF54211 296 489 5.01E-46 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_01990 d70c2c67bcd0aaae845775231b634d13 700 Gene3D G3DSA:3.30.1370.10 551 622 1.1E-20 T 15-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 SMART SM00322 553 618 2.7E-13 T 15-10-2018 IPR004087 K Homology domain GO:0003676 D934_01990 d70c2c67bcd0aaae845775231b634d13 700 SUPERFAMILY SSF50249 607 694 1.88E-22 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_07080 da73f6d76b641cf9e691b3246fb4cf17 843 SMART SM00885 372 531 2.9E-47 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D934_07080 da73f6d76b641cf9e691b3246fb4cf17 843 SUPERFAMILY SSF52540 525 689 2.39E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_07080 da73f6d76b641cf9e691b3246fb4cf17 843 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 480 802 1.4E-79 T 15-10-2018 IPR006500 DNA primase, phage/plasmid D934_07080 da73f6d76b641cf9e691b3246fb4cf17 843 Pfam PF03288 Poxvirus D5 protein-like 751 820 1.7E-5 T 15-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal D934_07080 da73f6d76b641cf9e691b3246fb4cf17 843 Pfam PF08706 D5 N terminal like 373 530 2.8E-34 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D934_09480 56505bba356be5e975a5bc641e1e91cd 194 Gene3D G3DSA:1.10.150.20 67 142 3.6E-25 T 15-10-2018 D934_09480 56505bba356be5e975a5bc641e1e91cd 194 SUPERFAMILY SSF46929 148 191 5.36E-7 T 15-10-2018 IPR036267 RuvA, C-terminal domain superfamily D934_09480 56505bba356be5e975a5bc641e1e91cd 194 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 193 1.2E-47 T 15-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 D934_09480 56505bba356be5e975a5bc641e1e91cd 194 SUPERFAMILY SSF47781 67 136 7.51E-21 T 15-10-2018 IPR010994 RuvA domain 2-like D934_09480 56505bba356be5e975a5bc641e1e91cd 194 Gene3D G3DSA:1.10.8.10 147 193 5.6E-9 T 15-10-2018 D934_09480 56505bba356be5e975a5bc641e1e91cd 194 SUPERFAMILY SSF50249 1 63 3.48E-16 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_09480 56505bba356be5e975a5bc641e1e91cd 194 Gene3D G3DSA:2.40.50.140 1 66 2.0E-22 T 15-10-2018 D934_09480 56505bba356be5e975a5bc641e1e91cd 194 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 193 30.291 T 15-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 D934_09480 56505bba356be5e975a5bc641e1e91cd 194 Pfam PF14520 Helix-hairpin-helix domain 72 130 2.3E-17 T 15-10-2018 D934_09480 56505bba356be5e975a5bc641e1e91cd 194 Pfam PF07499 RuvA, C-terminal domain 150 191 1.1E-6 T 15-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 D934_09480 56505bba356be5e975a5bc641e1e91cd 194 Pfam PF01330 RuvA N terminal domain 1 62 1.9E-17 T 15-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 D934_09480 56505bba356be5e975a5bc641e1e91cd 194 SMART SM00278 73 92 5.2 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D934_09480 56505bba356be5e975a5bc641e1e91cd 194 SMART SM00278 108 127 0.31 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 Pfam PF00206 Lyase 18 341 6.0E-95 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 Hamap MF_00743 Fumarate hydratase class II [fumC]. 9 461 81.153 T 15-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 1.3E-6 T 15-10-2018 D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 PRINTS PR00145 Argininosuccinate lyase family signature 132 154 1.3E-6 T 15-10-2018 D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 PRINTS PR00145 Argininosuccinate lyase family signature 316 332 1.3E-6 T 15-10-2018 D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 Pfam PF10415 Fumarase C C-terminus 407 459 2.9E-17 T 15-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 3.7E-32 T 15-10-2018 IPR000362 Fumarate lyase family D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 3.7E-32 T 15-10-2018 IPR000362 Fumarate lyase family D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 3.7E-32 T 15-10-2018 IPR000362 Fumarate lyase family D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 3.7E-32 T 15-10-2018 IPR000362 Fumarate lyase family D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 SUPERFAMILY SSF48557 9 458 6.13E-141 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 Gene3D G3DSA:1.20.200.10 138 406 1.4E-99 T 15-10-2018 D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 Gene3D G3DSA:1.10.275.10 10 137 2.5E-50 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 D934_10300 f9aebe4d21056ca18b32c4e35c252d37 471 Gene3D G3DSA:1.10.40.30 407 458 2.0E-17 T 15-10-2018 D934_13300 3f4656a8b70f446189f7f6e3a99ad05e 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 44 3.7E-10 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D934_13300 3f4656a8b70f446189f7f6e3a99ad05e 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 3.7E-10 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D934_13300 3f4656a8b70f446189f7f6e3a99ad05e 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 3.7E-10 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D934_13300 3f4656a8b70f446189f7f6e3a99ad05e 114 SMART SM00418 27 105 6.4E-23 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D934_13300 3f4656a8b70f446189f7f6e3a99ad05e 114 SUPERFAMILY SSF46785 12 109 2.6E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_13300 3f4656a8b70f446189f7f6e3a99ad05e 114 Gene3D G3DSA:1.10.10.10 13 114 2.4E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_13300 3f4656a8b70f446189f7f6e3a99ad05e 114 Pfam PF12840 Helix-turn-helix domain 27 82 2.8E-11 T 15-10-2018 D934_08555 15bfb93b52c9d488f95868b23ba91463 327 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 84 327 2.8E-77 T 15-10-2018 IPR020049 Protein of unknown function DUF2184 D934_08555 15bfb93b52c9d488f95868b23ba91463 327 PIRSF PIRSF029202 22 327 4.3E-131 T 15-10-2018 IPR020049 Protein of unknown function DUF2184 D934_06665 15bfb93b52c9d488f95868b23ba91463 327 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 84 327 2.8E-77 T 15-10-2018 IPR020049 Protein of unknown function DUF2184 D934_06665 15bfb93b52c9d488f95868b23ba91463 327 PIRSF PIRSF029202 22 327 4.3E-131 T 15-10-2018 IPR020049 Protein of unknown function DUF2184 D934_01445 fde048a9b8c9e0004e3f6f3d5db551b2 71 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 1.1E-26 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 D934_01445 fde048a9b8c9e0004e3f6f3d5db551b2 71 Gene3D G3DSA:3.30.70.1680 1 58 5.1E-28 T 15-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 D934_01445 fde048a9b8c9e0004e3f6f3d5db551b2 71 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 7.0E-21 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 D934_01445 fde048a9b8c9e0004e3f6f3d5db551b2 71 SUPERFAMILY SSF117130 1 53 3.01E-20 T 15-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 D934_01445 fde048a9b8c9e0004e3f6f3d5db551b2 71 Pfam PF02599 Global regulator protein family 1 52 2.7E-26 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 D934_01445 fde048a9b8c9e0004e3f6f3d5db551b2 71 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 71 16.759 T 15-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 D934_02405 4a7be761e662bfea4532106eac35b59a 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.9E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D934_02405 4a7be761e662bfea4532106eac35b59a 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.9E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D934_02405 4a7be761e662bfea4532106eac35b59a 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.9E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D934_02405 4a7be761e662bfea4532106eac35b59a 210 Gene3D G3DSA:3.40.50.12740 5 206 5.1E-48 T 15-10-2018 D934_02405 4a7be761e662bfea4532106eac35b59a 210 SUPERFAMILY SSF52172 1 143 2.28E-25 T 15-10-2018 IPR011006 CheY-like superfamily D934_02405 4a7be761e662bfea4532106eac35b59a 210 Pfam PF00072 Response regulator receiver domain 6 118 2.1E-18 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_02405 4a7be761e662bfea4532106eac35b59a 210 SMART SM00448 4 118 2.0E-17 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_02405 4a7be761e662bfea4532106eac35b59a 210 SUPERFAMILY SSF46894 129 204 5.1E-19 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D934_02405 4a7be761e662bfea4532106eac35b59a 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 2.3E-18 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D934_02405 4a7be761e662bfea4532106eac35b59a 210 SMART SM00421 146 203 3.7E-21 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D934_02405 4a7be761e662bfea4532106eac35b59a 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D934_11440 e36c2e0570f029d0c73b0cc0e329c9c4 476 SMART SM00363 27 85 9.8E-11 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_11440 e36c2e0570f029d0c73b0cc0e329c9c4 476 SUPERFAMILY SSF55120 86 263 1.06E-37 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_11440 e36c2e0570f029d0c73b0cc0e329c9c4 476 Gene3D G3DSA:3.10.290.10 23 79 4.2E-16 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D934_11440 e36c2e0570f029d0c73b0cc0e329c9c4 476 SUPERFAMILY SSF55174 25 113 4.56E-17 T 15-10-2018 D934_11440 e36c2e0570f029d0c73b0cc0e329c9c4 476 Gene3D G3DSA:3.30.70.1560 152 247 8.6E-47 T 15-10-2018 D934_11440 e36c2e0570f029d0c73b0cc0e329c9c4 476 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 94 258 1.5E-50 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 D934_11440 e36c2e0570f029d0c73b0cc0e329c9c4 476 Pfam PF00849 RNA pseudouridylate synthase 90 225 6.1E-16 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_11440 e36c2e0570f029d0c73b0cc0e329c9c4 476 Pfam PF01479 S4 domain 27 72 5.3E-10 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_11440 e36c2e0570f029d0c73b0cc0e329c9c4 476 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 128 142 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 D934_11440 e36c2e0570f029d0c73b0cc0e329c9c4 476 Gene3D G3DSA:3.30.70.580 92 254 8.6E-47 T 15-10-2018 D934_01785 e9e7396121019d69184b0219aa1eedc7 446 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D934_01785 e9e7396121019d69184b0219aa1eedc7 446 SUPERFAMILY SSF52540 74 360 6.3E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_01785 e9e7396121019d69184b0219aa1eedc7 446 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.2E-29 T 15-10-2018 IPR001650 Helicase, C-terminal D934_01785 e9e7396121019d69184b0219aa1eedc7 446 SMART SM00487 20 223 2.5E-58 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_01785 e9e7396121019d69184b0219aa1eedc7 446 Gene3D G3DSA:3.40.50.300 209 374 7.2E-48 T 15-10-2018 D934_01785 e9e7396121019d69184b0219aa1eedc7 446 SMART SM00490 259 340 2.4E-31 T 15-10-2018 IPR001650 Helicase, C-terminal D934_01785 e9e7396121019d69184b0219aa1eedc7 446 Gene3D G3DSA:3.40.50.300 1 208 2.2E-76 T 15-10-2018 D934_01785 e9e7396121019d69184b0219aa1eedc7 446 Pfam PF00270 DEAD/DEAH box helicase 25 196 5.6E-50 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D934_00280 b60bde217a1fa0fa2f779c330851a44d 298 Gene3D G3DSA:3.30.70.890 176 294 8.0E-21 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily D934_00280 b60bde217a1fa0fa2f779c330851a44d 298 Gene3D G3DSA:3.30.230.10 9 174 4.2E-51 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D934_00280 b60bde217a1fa0fa2f779c330851a44d 298 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 18 286 29.949 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 D934_00280 b60bde217a1fa0fa2f779c330851a44d 298 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 19 290 6.2E-65 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 D934_00280 b60bde217a1fa0fa2f779c330851a44d 298 Pfam PF08544 GHMP kinases C terminal 223 272 1.0E-4 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain D934_00280 b60bde217a1fa0fa2f779c330851a44d 298 SUPERFAMILY SSF54211 20 172 5.77E-41 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_00280 b60bde217a1fa0fa2f779c330851a44d 298 PIRSF PIRSF010376 16 294 1.2E-76 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 D934_00280 b60bde217a1fa0fa2f779c330851a44d 298 Pfam PF00288 GHMP kinases N terminal domain 101 158 8.4E-9 T 15-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 D934_00280 b60bde217a1fa0fa2f779c330851a44d 298 SUPERFAMILY SSF55060 175 292 4.32E-22 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily D934_12950 6874614554eecc325739459c6cf2e5b3 558 SMART SM00086 240 282 8.3E-5 T 15-10-2018 IPR001610 PAC motif D934_12950 6874614554eecc325739459c6cf2e5b3 558 Gene3D G3DSA:3.30.450.20 43 164 1.5E-11 T 15-10-2018 D934_12950 6874614554eecc325739459c6cf2e5b3 558 SUPERFAMILY SSF55874 364 530 1.83E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_12950 6874614554eecc325739459c6cf2e5b3 558 SUPERFAMILY SSF55785 71 164 4.19E-7 T 15-10-2018 IPR035965 PAS domain superfamily D934_12950 6874614554eecc325739459c6cf2e5b3 558 SMART SM00388 309 375 4.1E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_12950 6874614554eecc325739459c6cf2e5b3 558 Gene3D G3DSA:1.10.287.130 279 372 1.3E-18 T 15-10-2018 D934_12950 6874614554eecc325739459c6cf2e5b3 558 Pfam PF00512 His Kinase A (phospho-acceptor) domain 310 372 2.0E-13 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_12950 6874614554eecc325739459c6cf2e5b3 558 SUPERFAMILY SSF55785 153 280 2.27E-24 T 15-10-2018 IPR035965 PAS domain superfamily D934_12950 6874614554eecc325739459c6cf2e5b3 558 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 164 287 6.6E-13 T 15-10-2018 IPR000014 PAS domain D934_12950 6874614554eecc325739459c6cf2e5b3 558 SMART SM00091 168 234 0.0019 T 15-10-2018 IPR000014 PAS domain D934_12950 6874614554eecc325739459c6cf2e5b3 558 Gene3D G3DSA:3.30.450.20 165 278 2.2E-21 T 15-10-2018 D934_12950 6874614554eecc325739459c6cf2e5b3 558 Gene3D G3DSA:3.30.565.10 374 533 1.5E-43 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_12950 6874614554eecc325739459c6cf2e5b3 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 5.0E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_12950 6874614554eecc325739459c6cf2e5b3 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 511 5.0E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_12950 6874614554eecc325739459c6cf2e5b3 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 531 5.0E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_12950 6874614554eecc325739459c6cf2e5b3 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 486 5.0E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_12950 6874614554eecc325739459c6cf2e5b3 558 SUPERFAMILY SSF47384 296 372 1.77E-16 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D934_12950 6874614554eecc325739459c6cf2e5b3 558 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 530 1.9E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_12950 6874614554eecc325739459c6cf2e5b3 558 Pfam PF08448 PAS fold 175 282 3.3E-11 T 15-10-2018 IPR013656 PAS fold-4 D934_12950 6874614554eecc325739459c6cf2e5b3 558 SMART SM00387 421 534 2.4E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_06110 cb6c06d8c919785b5ec53ca4bbbfc343 548 SUPERFAMILY SSF56801 6 517 2.62E-76 T 15-10-2018 D934_06110 cb6c06d8c919785b5ec53ca4bbbfc343 548 Pfam PF00501 AMP-binding enzyme 39 444 1.3E-56 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D934_06110 cb6c06d8c919785b5ec53ca4bbbfc343 548 Gene3D G3DSA:3.40.50.12780 2 439 7.7E-74 T 15-10-2018 D934_06110 cb6c06d8c919785b5ec53ca4bbbfc343 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 15-10-2018 IPR020845 AMP-binding, conserved site D934_00165 b06b5f63715eb8dee52c9869efb19122 396 Pfam PF03143 Elongation factor Tu C-terminal domain 301 394 9.8E-33 T 15-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal D934_00165 b06b5f63715eb8dee52c9869efb19122 396 Gene3D G3DSA:2.40.30.10 208 336 1.5E-51 T 15-10-2018 D934_00165 b06b5f63715eb8dee52c9869efb19122 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.028 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D934_00165 b06b5f63715eb8dee52c9869efb19122 396 SUPERFAMILY SSF50447 207 300 1.06E-28 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D934_00165 b06b5f63715eb8dee52c9869efb19122 396 Pfam PF00009 Elongation factor Tu GTP binding domain 11 203 6.2E-58 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00165 b06b5f63715eb8dee52c9869efb19122 396 Gene3D G3DSA:3.40.50.300 1 205 1.3E-68 T 15-10-2018 D934_00165 b06b5f63715eb8dee52c9869efb19122 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 1.2E-14 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D934_00165 b06b5f63715eb8dee52c9869efb19122 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.9E-17 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D934_00165 b06b5f63715eb8dee52c9869efb19122 396 Gene3D G3DSA:2.40.30.10 340 395 5.2E-28 T 15-10-2018 D934_00165 b06b5f63715eb8dee52c9869efb19122 396 SUPERFAMILY SSF50465 304 396 1.58E-36 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal D934_00165 b06b5f63715eb8dee52c9869efb19122 396 SUPERFAMILY SSF52540 5 221 4.53E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00165 b06b5f63715eb8dee52c9869efb19122 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 2.5E-222 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D934_00165 b06b5f63715eb8dee52c9869efb19122 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00165 b06b5f63715eb8dee52c9869efb19122 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00165 b06b5f63715eb8dee52c9869efb19122 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00165 b06b5f63715eb8dee52c9869efb19122 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00165 b06b5f63715eb8dee52c9869efb19122 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00165 b06b5f63715eb8dee52c9869efb19122 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site D934_00230 b06b5f63715eb8dee52c9869efb19122 396 Pfam PF03143 Elongation factor Tu C-terminal domain 301 394 9.8E-33 T 15-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal D934_00230 b06b5f63715eb8dee52c9869efb19122 396 Gene3D G3DSA:2.40.30.10 208 336 1.5E-51 T 15-10-2018 D934_00230 b06b5f63715eb8dee52c9869efb19122 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.028 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D934_00230 b06b5f63715eb8dee52c9869efb19122 396 SUPERFAMILY SSF50447 207 300 1.06E-28 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D934_00230 b06b5f63715eb8dee52c9869efb19122 396 Pfam PF00009 Elongation factor Tu GTP binding domain 11 203 6.2E-58 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00230 b06b5f63715eb8dee52c9869efb19122 396 Gene3D G3DSA:3.40.50.300 1 205 1.3E-68 T 15-10-2018 D934_00230 b06b5f63715eb8dee52c9869efb19122 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 1.2E-14 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D934_00230 b06b5f63715eb8dee52c9869efb19122 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.9E-17 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D934_00230 b06b5f63715eb8dee52c9869efb19122 396 Gene3D G3DSA:2.40.30.10 340 395 5.2E-28 T 15-10-2018 D934_00230 b06b5f63715eb8dee52c9869efb19122 396 SUPERFAMILY SSF50465 304 396 1.58E-36 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal D934_00230 b06b5f63715eb8dee52c9869efb19122 396 SUPERFAMILY SSF52540 5 221 4.53E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00230 b06b5f63715eb8dee52c9869efb19122 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 2.5E-222 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D934_00230 b06b5f63715eb8dee52c9869efb19122 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00230 b06b5f63715eb8dee52c9869efb19122 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00230 b06b5f63715eb8dee52c9869efb19122 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00230 b06b5f63715eb8dee52c9869efb19122 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00230 b06b5f63715eb8dee52c9869efb19122 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D934_00230 b06b5f63715eb8dee52c9869efb19122 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site D934_00260 6620d65fa47f7cee1280a6eec8767f59 192 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 189 4.4E-56 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 D934_00260 6620d65fa47f7cee1280a6eec8767f59 192 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 33.948 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 D934_00260 6620d65fa47f7cee1280a6eec8767f59 192 Gene3D G3DSA:3.40.50.1470 2 192 2.5E-58 T 15-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 D934_00260 6620d65fa47f7cee1280a6eec8767f59 192 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 1.2E-49 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 D934_00260 6620d65fa47f7cee1280a6eec8767f59 192 SUPERFAMILY SSF53178 5 189 1.09E-64 T 15-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 D934_00260 6620d65fa47f7cee1280a6eec8767f59 192 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 15-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 D934_00485 21fe59f18066c69cf4c6abe9e5a94121 484 Pfam PF03572 Peptidase family S41 207 370 2.5E-51 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D934_00485 21fe59f18066c69cf4c6abe9e5a94121 484 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 63 373 1.6E-92 T 15-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 D934_00485 21fe59f18066c69cf4c6abe9e5a94121 484 SMART SM00228 110 179 4.4E-13 T 15-10-2018 IPR001478 PDZ domain GO:0005515 D934_00485 21fe59f18066c69cf4c6abe9e5a94121 484 Gene3D G3DSA:2.30.42.10 110 195 8.7E-90 T 15-10-2018 D934_00485 21fe59f18066c69cf4c6abe9e5a94121 484 Gene3D G3DSA:3.90.226.10 196 370 8.7E-90 T 15-10-2018 D934_00485 21fe59f18066c69cf4c6abe9e5a94121 484 Pfam PF13180 PDZ domain 111 187 4.6E-12 T 15-10-2018 IPR001478 PDZ domain GO:0005515 D934_00485 21fe59f18066c69cf4c6abe9e5a94121 484 SUPERFAMILY SSF52096 50 375 8.28E-72 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D934_00485 21fe59f18066c69cf4c6abe9e5a94121 484 Gene3D G3DSA:3.30.750.44 58 348 8.7E-90 T 15-10-2018 D934_00485 21fe59f18066c69cf4c6abe9e5a94121 484 SUPERFAMILY SSF50156 106 191 2.23E-16 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 D934_00485 21fe59f18066c69cf4c6abe9e5a94121 484 SMART SM00245 181 373 1.1E-63 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D934_01375 813eb316ffb3e4832c4eca2449d5c91d 136 Gene3D G3DSA:2.30.30.790 3 121 7.0E-13 T 15-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_01375 813eb316ffb3e4832c4eca2449d5c91d 136 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 15-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_01375 813eb316ffb3e4832c4eca2449d5c91d 136 PIRSF PIRSF002191 1 135 4.3E-49 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_01375 813eb316ffb3e4832c4eca2449d5c91d 136 SUPERFAMILY SSF50104 7 125 3.11E-44 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily D934_01375 813eb316ffb3e4832c4eca2449d5c91d 136 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 118 29.074 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_01375 813eb316ffb3e4832c4eca2449d5c91d 136 PRINTS PR00061 Ribosomal protein L19 signature 92 117 1.1E-36 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_01375 813eb316ffb3e4832c4eca2449d5c91d 136 PRINTS PR00061 Ribosomal protein L19 signature 38 67 1.1E-36 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_01375 813eb316ffb3e4832c4eca2449d5c91d 136 PRINTS PR00061 Ribosomal protein L19 signature 8 37 1.1E-36 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_01375 813eb316ffb3e4832c4eca2449d5c91d 136 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 7 117 2.0E-46 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_01375 813eb316ffb3e4832c4eca2449d5c91d 136 Pfam PF01245 Ribosomal protein L19 8 116 1.6E-47 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_06190 199806b8cee3238a8a5ef1acdf6067d8 188 Gene3D G3DSA:2.40.50.140 1 172 4.5E-49 T 15-10-2018 D934_06190 199806b8cee3238a8a5ef1acdf6067d8 188 SUPERFAMILY SSF50249 6 169 2.4E-11 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_06190 199806b8cee3238a8a5ef1acdf6067d8 188 Pfam PF10991 Protein of unknown function (DUF2815) 2 173 1.5E-48 T 15-10-2018 IPR022595 Protein of unknown function DUF2815 D934_04420 199806b8cee3238a8a5ef1acdf6067d8 188 Gene3D G3DSA:2.40.50.140 1 172 4.5E-49 T 15-10-2018 D934_04420 199806b8cee3238a8a5ef1acdf6067d8 188 SUPERFAMILY SSF50249 6 169 2.4E-11 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_04420 199806b8cee3238a8a5ef1acdf6067d8 188 Pfam PF10991 Protein of unknown function (DUF2815) 2 173 1.5E-48 T 15-10-2018 IPR022595 Protein of unknown function DUF2815 D934_10460 020cb98293d6384e6792727626b91b68 132 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.0E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_10460 020cb98293d6384e6792727626b91b68 132 SUPERFAMILY SSF54523 8 84 5.49E-5 T 15-10-2018 D934_10460 020cb98293d6384e6792727626b91b68 132 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 6.7E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_10460 020cb98293d6384e6792727626b91b68 132 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_12895 33a3ef27344e0dc77ed1dac98fe1bea7 300 SUPERFAMILY SSF160240 220 287 4.45E-8 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 D934_12895 33a3ef27344e0dc77ed1dac98fe1bea7 300 SUPERFAMILY SSF161111 15 210 4.45E-56 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily D934_12895 33a3ef27344e0dc77ed1dac98fe1bea7 300 Pfam PF01545 Cation efflux family 20 209 5.2E-48 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 D934_12895 33a3ef27344e0dc77ed1dac98fe1bea7 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 289 1.6E-83 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 D934_12895 33a3ef27344e0dc77ed1dac98fe1bea7 300 Gene3D G3DSA:1.20.1510.10 15 209 3.2E-47 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily D934_01225 345b4ba03d021a66dc44ad68ba0a4808 455 SMART SM00963 1 86 2.2E-33 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D934_01225 345b4ba03d021a66dc44ad68ba0a4808 455 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 33.674 T 15-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 D934_01225 345b4ba03d021a66dc44ad68ba0a4808 455 Gene3D G3DSA:1.20.120.140 5 306 1.5E-117 T 15-10-2018 D934_01225 345b4ba03d021a66dc44ad68ba0a4808 455 Pfam PF02978 Signal peptide binding domain 328 427 1.0E-32 T 15-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 D934_01225 345b4ba03d021a66dc44ad68ba0a4808 455 Gene3D G3DSA:1.10.260.30 328 451 1.5E-40 T 15-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 D934_01225 345b4ba03d021a66dc44ad68ba0a4808 455 Gene3D G3DSA:3.40.50.300 90 285 1.5E-117 T 15-10-2018 D934_01225 345b4ba03d021a66dc44ad68ba0a4808 455 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D934_01225 345b4ba03d021a66dc44ad68ba0a4808 455 Pfam PF00448 SRP54-type protein, GTPase domain 100 295 2.1E-72 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D934_01225 345b4ba03d021a66dc44ad68ba0a4808 455 SMART SM00382 99 301 1.5E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_01225 345b4ba03d021a66dc44ad68ba0a4808 455 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.8E-19 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D934_01225 345b4ba03d021a66dc44ad68ba0a4808 455 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 2.3E-171 T 15-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 D934_01225 345b4ba03d021a66dc44ad68ba0a4808 455 SMART SM00962 100 296 1.9E-109 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D934_01225 345b4ba03d021a66dc44ad68ba0a4808 455 SUPERFAMILY SSF52540 42 353 5.31E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_01225 345b4ba03d021a66dc44ad68ba0a4808 455 SUPERFAMILY SSF47446 328 430 4.25E-37 T 15-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 D934_10970 01c14dab6f73c9e1963762784547da42 130 Gene3D G3DSA:3.30.1450.10 35 111 8.6E-29 T 15-10-2018 IPR037873 BamE-like D934_10970 01c14dab6f73c9e1963762784547da42 130 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 118 27.47 T 15-10-2018 IPR026592 Outer membrane protein assembly factor BamE D934_10970 01c14dab6f73c9e1963762784547da42 130 Pfam PF04355 SmpA / OmlA family 29 99 3.2E-23 T 15-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 D934_07455 9864fad2199174ca87ab532b782e9228 143 SUPERFAMILY SSF82784 5 139 3.8E-41 T 15-10-2018 IPR036102 OsmC/Ohr superfamily D934_07455 9864fad2199174ca87ab532b782e9228 143 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 8 139 4.2E-52 T 15-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 D934_07455 9864fad2199174ca87ab532b782e9228 143 Pfam PF02566 OsmC-like protein 44 137 2.6E-16 T 15-10-2018 IPR003718 OsmC/Ohr family D934_07455 9864fad2199174ca87ab532b782e9228 143 Gene3D G3DSA:2.20.25.10 1 48 1.3E-23 T 15-10-2018 D934_07455 9864fad2199174ca87ab532b782e9228 143 Gene3D G3DSA:3.30.300.20 49 141 3.2E-30 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta D934_04395 f96f497b247a0aa8ca85688d10adaa09 464 Pfam PF00176 SNF2 family N-terminal domain 25 264 3.4E-16 T 15-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 D934_04395 f96f497b247a0aa8ca85688d10adaa09 464 SUPERFAMILY SSF52540 117 455 3.84E-26 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04395 f96f497b247a0aa8ca85688d10adaa09 464 SUPERFAMILY SSF52540 2 202 1.54E-32 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04395 f96f497b247a0aa8ca85688d10adaa09 464 Gene3D G3DSA:3.40.50.300 243 463 2.6E-17 T 15-10-2018 D934_04395 f96f497b247a0aa8ca85688d10adaa09 464 Gene3D G3DSA:3.40.50.10810 4 228 3.5E-23 T 15-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily D934_04395 f96f497b247a0aa8ca85688d10adaa09 464 SMART SM00487 2 188 3.6E-7 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_05425 3b83064f9a3c876ecf47ef646f956cae 154 Gene3D G3DSA:3.40.50.960 1 154 7.9E-55 T 15-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D934_05425 3b83064f9a3c876ecf47ef646f956cae 154 SUPERFAMILY SSF52121 4 153 3.53E-52 T 15-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D934_05425 3b83064f9a3c876ecf47ef646f956cae 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 27.506 T 15-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D934_05425 3b83064f9a3c876ecf47ef646f956cae 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 149 1.8E-40 T 15-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D934_05425 3b83064f9a3c876ecf47ef646f956cae 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 1.3E-49 T 15-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D934_00895 ce59260c10ba39a4520c7e70e1300a63 904 Pfam PF01522 Polysaccharide deacetylase 251 383 5.3E-27 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 D934_00895 ce59260c10ba39a4520c7e70e1300a63 904 Gene3D G3DSA:3.20.20.370 226 451 1.2E-50 T 15-10-2018 D934_00895 ce59260c10ba39a4520c7e70e1300a63 904 Gene3D G3DSA:1.25.40.10 786 900 4.6E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_00895 ce59260c10ba39a4520c7e70e1300a63 904 Pfam PF00656 Caspase domain 478 671 1.4E-23 T 15-10-2018 D934_00895 ce59260c10ba39a4520c7e70e1300a63 904 Gene3D G3DSA:3.40.50.1460 475 705 1.9E-32 T 15-10-2018 D934_00895 ce59260c10ba39a4520c7e70e1300a63 904 SUPERFAMILY SSF52129 472 701 1.36E-18 T 15-10-2018 IPR029030 Caspase-like domain superfamily D934_00895 ce59260c10ba39a4520c7e70e1300a63 904 SUPERFAMILY SSF88713 237 448 1.42E-46 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D934_00895 ce59260c10ba39a4520c7e70e1300a63 904 SUPERFAMILY SSF48452 771 893 6.33E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_00895 ce59260c10ba39a4520c7e70e1300a63 904 ProSitePatterns PS00018 EF-hand calcium-binding domain. 672 684 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site D934_01930 517b743e82bd75ccee92803b3f759b32 165 SUPERFAMILY SSF55083 7 155 2.88E-49 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D934_01930 517b743e82bd75ccee92803b3f759b32 165 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 94 105 - T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D934_01930 517b743e82bd75ccee92803b3f759b32 165 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 8 138 9.8E-45 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D934_01930 517b743e82bd75ccee92803b3f759b32 165 Gene3D G3DSA:3.30.70.560 6 162 2.5E-50 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D934_01930 517b743e82bd75ccee92803b3f759b32 165 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 9 138 8.4E-34 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D934_03390 dc47b166626ec84c6fe835fe7ab16d2d 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 28.764 T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03390 dc47b166626ec84c6fe835fe7ab16d2d 132 Gene3D G3DSA:3.30.1370.30 2 74 1.7E-23 T 15-10-2018 D934_03390 dc47b166626ec84c6fe835fe7ab16d2d 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03390 dc47b166626ec84c6fe835fe7ab16d2d 132 Pfam PF00410 Ribosomal protein S8 5 131 5.8E-43 T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03390 dc47b166626ec84c6fe835fe7ab16d2d 132 Gene3D G3DSA:3.30.1490.10 76 131 1.5E-21 T 15-10-2018 D934_03390 dc47b166626ec84c6fe835fe7ab16d2d 132 SUPERFAMILY SSF56047 2 131 2.62E-41 T 15-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03135 80445a2bd072b26c0211e303e136f7c5 506 Pfam PF01336 OB-fold nucleic acid binding domain 70 147 6.8E-15 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 D934_03135 80445a2bd072b26c0211e303e136f7c5 506 Gene3D G3DSA:3.30.930.10 156 500 2.3E-127 T 15-10-2018 D934_03135 80445a2bd072b26c0211e303e136f7c5 506 SUPERFAMILY SSF55681 163 503 2.77E-114 T 15-10-2018 D934_03135 80445a2bd072b26c0211e303e136f7c5 506 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 505 2.3E-199 T 15-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D934_03135 80445a2bd072b26c0211e303e136f7c5 506 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 505 42.978 T 15-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D934_03135 80445a2bd072b26c0211e303e136f7c5 506 Gene3D G3DSA:2.40.50.140 14 155 2.0E-39 T 15-10-2018 D934_03135 80445a2bd072b26c0211e303e136f7c5 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 200 210 9.9E-39 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D934_03135 80445a2bd072b26c0211e303e136f7c5 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 263 280 9.9E-39 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D934_03135 80445a2bd072b26c0211e303e136f7c5 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 387 403 9.9E-39 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D934_03135 80445a2bd072b26c0211e303e136f7c5 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 216 232 9.9E-39 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D934_03135 80445a2bd072b26c0211e303e136f7c5 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 245 258 9.9E-39 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D934_03135 80445a2bd072b26c0211e303e136f7c5 506 SUPERFAMILY SSF50249 12 156 3.77E-38 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_03135 80445a2bd072b26c0211e303e136f7c5 506 Pfam PF00152 tRNA synthetases class II (D, K and N) 164 502 2.1E-78 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_01335 db7437dbf558477bc7f698d7407189e6 376 SUPERFAMILY SSF53756 11 375 9.87E-56 T 15-10-2018 D934_01335 db7437dbf558477bc7f698d7407189e6 376 Gene3D G3DSA:3.40.50.2000 188 353 2.0E-23 T 15-10-2018 D934_01335 db7437dbf558477bc7f698d7407189e6 376 Pfam PF13439 Glycosyltransferase Family 4 21 175 1.6E-22 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D934_01335 db7437dbf558477bc7f698d7407189e6 376 Gene3D G3DSA:3.40.50.2000 13 187 1.2E-22 T 15-10-2018 D934_01335 db7437dbf558477bc7f698d7407189e6 376 Pfam PF00534 Glycosyl transferases group 1 198 345 2.1E-15 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 D934_09580 2ada01e60aca6eeca2090a497adbaaea 512 Gene3D G3DSA:3.50.50.60 13 390 4.4E-127 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_09580 2ada01e60aca6eeca2090a497adbaaea 512 SUPERFAMILY SSF46977 416 490 8.76E-13 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_09580 2ada01e60aca6eeca2090a497adbaaea 512 Pfam PF02910 Fumarate reductase flavoprotein C-term 455 487 8.0E-6 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_09580 2ada01e60aca6eeca2090a497adbaaea 512 SUPERFAMILY SSF51905 13 406 3.92E-47 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_09580 2ada01e60aca6eeca2090a497adbaaea 512 Gene3D G3DSA:1.20.58.100 405 496 1.0E-11 T 15-10-2018 D934_09580 2ada01e60aca6eeca2090a497adbaaea 512 Pfam PF00890 FAD binding domain 13 378 6.1E-77 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_09580 2ada01e60aca6eeca2090a497adbaaea 512 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 341 363 7.0E-6 T 15-10-2018 D934_09580 2ada01e60aca6eeca2090a497adbaaea 512 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 7.0E-6 T 15-10-2018 D934_09580 2ada01e60aca6eeca2090a497adbaaea 512 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 13 480 1.1E-136 T 15-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 D934_09580 2ada01e60aca6eeca2090a497adbaaea 512 Gene3D G3DSA:3.90.700.10 237 344 4.4E-127 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_09580 2ada01e60aca6eeca2090a497adbaaea 512 SUPERFAMILY SSF56425 227 338 4.19E-35 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_13675 dbd5334d35a6ec796b8cfb02434600ae 586 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 12 584 1.0E-278 T 15-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein D934_13675 dbd5334d35a6ec796b8cfb02434600ae 586 Pfam PF00005 ABC transporter 364 513 6.7E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_13675 dbd5334d35a6ec796b8cfb02434600ae 586 Gene3D G3DSA:1.20.1560.10 11 332 6.2E-76 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D934_13675 dbd5334d35a6ec796b8cfb02434600ae 586 Gene3D G3DSA:3.40.50.300 338 585 1.7E-92 T 15-10-2018 D934_13675 dbd5334d35a6ec796b8cfb02434600ae 586 SMART SM00382 373 559 6.3E-22 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_13675 dbd5334d35a6ec796b8cfb02434600ae 586 Pfam PF00664 ABC transporter transmembrane region 34 292 5.4E-51 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D934_13675 dbd5334d35a6ec796b8cfb02434600ae 586 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_13675 dbd5334d35a6ec796b8cfb02434600ae 586 SUPERFAMILY SSF52540 336 584 4.11E-90 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_13675 dbd5334d35a6ec796b8cfb02434600ae 586 SUPERFAMILY SSF90123 17 326 9.55E-70 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D934_06385 67cc4f2771bb113d4622ca2886ee60f0 120 Pfam PF04965 Gene 25-like lysozyme 24 94 6.7E-14 T 15-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD D934_06385 67cc4f2771bb113d4622ca2886ee60f0 120 Gene3D G3DSA:3.10.450.40 3 113 2.9E-20 T 15-10-2018 D934_06385 67cc4f2771bb113d4622ca2886ee60f0 120 SUPERFAMILY SSF160719 17 112 3.79E-26 T 15-10-2018 D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 SUPERFAMILY SSF49785 466 593 7.37E-19 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 SUPERFAMILY SSF49785 378 492 6.66E-5 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 ProSitePatterns PS01182 Glycosyl hydrolases family 35 putative active site. 171 183 - T 15-10-2018 IPR019801 Glycoside hydrolase, family 35, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 Gene3D G3DSA:3.20.20.80 26 295 2.2E-100 T 15-10-2018 D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 SUPERFAMILY SSF51445 28 352 4.74E-94 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 548 564 4.5E-47 T 15-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 114 133 4.5E-47 T 15-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 321 337 4.5E-47 T 15-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 38 55 4.5E-47 T 15-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 169 184 4.5E-47 T 15-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 59 77 4.5E-47 T 15-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 PRINTS PR00742 Glycosyl hydrolase family 35 signature 255 270 4.5E-47 T 15-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 Pfam PF01301 Glycosyl hydrolases family 35 34 352 1.4E-116 T 15-10-2018 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 Gene3D G3DSA:2.60.120.260 375 506 5.3E-89 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 Gene3D G3DSA:2.60.120.260 296 589 5.3E-89 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily D934_13010 b3e301376cfe4ad0ea8fb36fe42f8d32 612 PIRSF PIRSF006336 13 604 3.4E-176 T 15-10-2018 IPR026283 Beta-galactosidase 1-like GO:0004565 D934_09475 999f41dc77dd30cb7066b67d5fc94511 634 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 14 634 33.444 T 15-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup D934_09475 999f41dc77dd30cb7066b67d5fc94511 634 Pfam PF02705 K+ potassium transporter 23 555 1.3E-214 T 15-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 D934_03425 e29f0c9749f85e0665fd5d85d7b97741 130 PIRSF PIRSF002131 1 130 1.7E-50 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 D934_03425 e29f0c9749f85e0665fd5d85d7b97741 130 Gene3D G3DSA:3.30.420.80 2 130 7.7E-51 T 15-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 D934_03425 e29f0c9749f85e0665fd5d85d7b97741 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 3.8E-52 T 15-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03425 e29f0c9749f85e0665fd5d85d7b97741 130 SUPERFAMILY SSF53137 17 130 2.42E-45 T 15-10-2018 D934_03425 e29f0c9749f85e0665fd5d85d7b97741 130 Pfam PF00411 Ribosomal protein S11 20 129 2.6E-48 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 D934_03425 e29f0c9749f85e0665fd5d85d7b97741 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 31.548 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 D934_03425 e29f0c9749f85e0665fd5d85d7b97741 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 15-10-2018 IPR018102 Ribosomal S11, conserved site D934_02070 720a1b65193ea9597b2032fb43ae16ca 302 Gene3D G3DSA:3.90.25.10 167 291 1.1E-101 T 15-10-2018 D934_02070 720a1b65193ea9597b2032fb43ae16ca 302 Pfam PF04321 RmlD substrate binding domain 2 297 4.5E-106 T 15-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 D934_02070 720a1b65193ea9597b2032fb43ae16ca 302 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 296 2.3E-115 T 15-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 D934_02070 720a1b65193ea9597b2032fb43ae16ca 302 SUPERFAMILY SSF51735 2 298 1.02E-91 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_02070 720a1b65193ea9597b2032fb43ae16ca 302 Gene3D G3DSA:3.40.50.720 3 284 1.1E-101 T 15-10-2018 D934_03290 7f7544d6feaff6487b5d0926795f9228 515 Gene3D G3DSA:3.40.50.300 96 384 5.2E-129 T 15-10-2018 D934_03290 7f7544d6feaff6487b5d0926795f9228 515 Gene3D G3DSA:2.40.30.20 3 95 2.1E-30 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D934_03290 7f7544d6feaff6487b5d0926795f9228 515 Gene3D G3DSA:1.20.150.20 385 515 7.9E-47 T 15-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03290 7f7544d6feaff6487b5d0926795f9228 515 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 512 1.4E-245 T 15-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03290 7f7544d6feaff6487b5d0926795f9228 515 SUPERFAMILY SSF52540 98 383 3.72E-94 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_03290 7f7544d6feaff6487b5d0926795f9228 515 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 514 49.202 T 15-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03290 7f7544d6feaff6487b5d0926795f9228 515 SUPERFAMILY SSF47917 385 512 4.71E-46 T 15-10-2018 D934_03290 7f7544d6feaff6487b5d0926795f9228 515 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 377 7.6E-73 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D934_03290 7f7544d6feaff6487b5d0926795f9228 515 SUPERFAMILY SSF50615 12 96 4.91E-26 T 15-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D934_03290 7f7544d6feaff6487b5d0926795f9228 515 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D934_03290 7f7544d6feaff6487b5d0926795f9228 515 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 384 509 2.2E-45 T 15-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03290 7f7544d6feaff6487b5d0926795f9228 515 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 94 1.1E-12 T 15-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D934_06720 59915b5746579cbaff620b9a6f12e084 95 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 21 58 2.1E-7 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D934_06720 59915b5746579cbaff620b9a6f12e084 95 SMART SM00966 21 61 4.7E-5 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D934_06720 59915b5746579cbaff620b9a6f12e084 95 Gene3D G3DSA:2.10.260.10 15 94 5.7E-16 T 15-10-2018 D934_06720 59915b5746579cbaff620b9a6f12e084 95 SUPERFAMILY SSF89447 18 80 6.8E-11 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily D934_08610 59915b5746579cbaff620b9a6f12e084 95 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 21 58 2.1E-7 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D934_08610 59915b5746579cbaff620b9a6f12e084 95 SMART SM00966 21 61 4.7E-5 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D934_08610 59915b5746579cbaff620b9a6f12e084 95 Gene3D G3DSA:2.10.260.10 15 94 5.7E-16 T 15-10-2018 D934_08610 59915b5746579cbaff620b9a6f12e084 95 SUPERFAMILY SSF89447 18 80 6.8E-11 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily D934_12505 096f236e0906b545c2f4dff4a5039688 284 ProSitePatterns PS00211 ABC transporters family signature. 181 195 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_12505 096f236e0906b545c2f4dff4a5039688 284 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 38 284 6.7E-118 T 15-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 D934_12505 096f236e0906b545c2f4dff4a5039688 284 SMART SM00382 62 271 8.5E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_12505 096f236e0906b545c2f4dff4a5039688 284 Gene3D G3DSA:3.40.50.300 37 282 3.6E-67 T 15-10-2018 D934_12505 096f236e0906b545c2f4dff4a5039688 284 Pfam PF00005 ABC transporter 53 209 1.1E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_12505 096f236e0906b545c2f4dff4a5039688 284 SUPERFAMILY SSF52540 38 271 4.19E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_03510 318bfbf055b26a4239583b10f8743356 94 SMART SM00411 1 90 1.1E-42 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_03510 318bfbf055b26a4239583b10f8743356 94 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.4E-33 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_03510 318bfbf055b26a4239583b10f8743356 94 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.0E-17 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_03510 318bfbf055b26a4239583b10f8743356 94 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.0E-17 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_03510 318bfbf055b26a4239583b10f8743356 94 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.0E-17 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_03510 318bfbf055b26a4239583b10f8743356 94 SUPERFAMILY SSF47729 1 90 3.68E-32 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D934_03510 318bfbf055b26a4239583b10f8743356 94 Gene3D G3DSA:4.10.520.10 1 93 1.6E-35 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D934_11700 4c7e3244253ea9864d9c7ca01249dbb2 159 Gene3D G3DSA:2.40.10.330 71 120 2.5E-50 T 15-10-2018 D934_11700 4c7e3244253ea9864d9c7ca01249dbb2 159 Gene3D G3DSA:3.10.50.40 3 153 2.5E-50 T 15-10-2018 D934_11700 4c7e3244253ea9864d9c7ca01249dbb2 159 SUPERFAMILY SSF54534 2 139 5.11E-34 T 15-10-2018 D934_11700 4c7e3244253ea9864d9c7ca01249dbb2 159 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 135 6.9E-10 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D934_12085 e698b904f8d8d28bcf1bca799bf7ea30 273 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 271 2.0E-85 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 D934_12085 e698b904f8d8d28bcf1bca799bf7ea30 273 Gene3D G3DSA:3.40.1010.10 1 113 1.6E-41 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 D934_12085 e698b904f8d8d28bcf1bca799bf7ea30 273 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 206 1.1E-27 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 D934_12085 e698b904f8d8d28bcf1bca799bf7ea30 273 PIRSF PIRSF005917 1 273 1.6E-99 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 D934_12085 e698b904f8d8d28bcf1bca799bf7ea30 273 Gene3D G3DSA:3.30.950.10 114 234 8.4E-43 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 D934_12085 e698b904f8d8d28bcf1bca799bf7ea30 273 SUPERFAMILY SSF53790 5 225 2.09E-79 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 D934_12085 e698b904f8d8d28bcf1bca799bf7ea30 273 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 15-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 D934_12085 e698b904f8d8d28bcf1bca799bf7ea30 273 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 227 37.82 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 D934_04050 33c6af5721c4ab9e8af64f883ba8ad6d 718 Pfam PF04607 Region found in RelA / SpoT proteins 241 351 1.2E-37 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 D934_04050 33c6af5721c4ab9e8af64f883ba8ad6d 718 SUPERFAMILY SSF55021 641 717 1.92E-6 T 15-10-2018 D934_04050 33c6af5721c4ab9e8af64f883ba8ad6d 718 Pfam PF13291 ACT domain 639 716 1.6E-13 T 15-10-2018 IPR002912 ACT domain D934_04050 33c6af5721c4ab9e8af64f883ba8ad6d 718 Pfam PF13328 HD domain 43 182 3.0E-16 T 15-10-2018 IPR003607 HD/PDEase domain D934_04050 33c6af5721c4ab9e8af64f883ba8ad6d 718 Gene3D G3DSA:3.10.20.30 386 462 2.8E-30 T 15-10-2018 IPR012675 Beta-grasp domain superfamily D934_04050 33c6af5721c4ab9e8af64f883ba8ad6d 718 Pfam PF02824 TGS domain 394 452 5.0E-20 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 D934_04050 33c6af5721c4ab9e8af64f883ba8ad6d 718 Gene3D G3DSA:1.10.3210.10 50 197 5.2E-20 T 15-10-2018 D934_04050 33c6af5721c4ab9e8af64f883ba8ad6d 718 SUPERFAMILY SSF81301 199 370 1.63E-61 T 15-10-2018 D934_04050 33c6af5721c4ab9e8af64f883ba8ad6d 718 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 119 715 4.6E-157 T 15-10-2018 IPR004811 RelA/SpoT family GO:0015969 D934_04050 33c6af5721c4ab9e8af64f883ba8ad6d 718 SUPERFAMILY SSF81271 387 452 1.79E-19 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 D934_04050 33c6af5721c4ab9e8af64f883ba8ad6d 718 SMART SM00954 241 351 7.9E-66 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 D934_04050 33c6af5721c4ab9e8af64f883ba8ad6d 718 Gene3D G3DSA:3.30.460.10 199 331 6.4E-48 T 15-10-2018 D934_04050 33c6af5721c4ab9e8af64f883ba8ad6d 718 SUPERFAMILY SSF109604 19 196 2.17E-23 T 15-10-2018 D934_04050 33c6af5721c4ab9e8af64f883ba8ad6d 718 Gene3D G3DSA:3.30.70.260 639 718 1.6E-9 T 15-10-2018 D934_06950 7350491ed67de983b63f99ba9c732d30 408 Gene3D G3DSA:3.40.47.10 2 253 2.7E-31 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_06950 7350491ed67de983b63f99ba9c732d30 408 SMART SM00825 Beta-ketoacyl synthase 13 408 2.1E-9 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D934_06950 7350491ed67de983b63f99ba9c732d30 408 Gene3D G3DSA:3.40.47.10 259 402 2.5E-41 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_06950 7350491ed67de983b63f99ba9c732d30 408 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 164 180 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site D934_06950 7350491ed67de983b63f99ba9c732d30 408 SUPERFAMILY SSF53901 220 406 6.59E-49 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_06950 7350491ed67de983b63f99ba9c732d30 408 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 81 248 5.4E-24 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D934_06950 7350491ed67de983b63f99ba9c732d30 408 SUPERFAMILY SSF53901 10 250 3.07E-35 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_06950 7350491ed67de983b63f99ba9c732d30 408 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 257 364 6.1E-27 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D934_02080 730e2effde5576f99760da6ddce6f12f 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 129 2.6E-34 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_02080 730e2effde5576f99760da6ddce6f12f 449 SUPERFAMILY SSF53738 151 254 2.08E-28 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_02080 730e2effde5576f99760da6ddce6f12f 449 Gene3D G3DSA:3.40.120.10 1 147 9.6E-54 T 15-10-2018 D934_02080 730e2effde5576f99760da6ddce6f12f 449 SUPERFAMILY SSF55957 366 449 1.01E-18 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_02080 730e2effde5576f99760da6ddce6f12f 449 Gene3D G3DSA:3.40.120.10 170 247 5.5E-30 T 15-10-2018 D934_02080 730e2effde5576f99760da6ddce6f12f 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 371 447 4.1E-12 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_02080 730e2effde5576f99760da6ddce6f12f 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 2.8E-28 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_02080 730e2effde5576f99760da6ddce6f12f 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 2.8E-28 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_02080 730e2effde5576f99760da6ddce6f12f 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 231 246 2.8E-28 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_02080 730e2effde5576f99760da6ddce6f12f 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 202 215 2.8E-28 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_02080 730e2effde5576f99760da6ddce6f12f 449 SUPERFAMILY SSF53738 4 175 2.74E-35 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_02080 730e2effde5576f99760da6ddce6f12f 449 SUPERFAMILY SSF53738 256 360 2.28E-30 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_02080 730e2effde5576f99760da6ddce6f12f 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 251 6.0E-23 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_02080 730e2effde5576f99760da6ddce6f12f 449 Gene3D G3DSA:3.30.310.50 367 449 1.9E-27 T 15-10-2018 D934_02080 730e2effde5576f99760da6ddce6f12f 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_02080 730e2effde5576f99760da6ddce6f12f 449 Gene3D G3DSA:3.40.120.10 248 366 3.6E-34 T 15-10-2018 D934_02080 730e2effde5576f99760da6ddce6f12f 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 366 2.3E-22 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_05130 ef0df085fa0a3fd2a57f432fb2d2ddd1 195 Gene3D G3DSA:2.60.220.40 90 157 3.2E-12 T 15-10-2018 D934_05130 ef0df085fa0a3fd2a57f432fb2d2ddd1 195 Gene3D G3DSA:2.40.50.230 2 87 1.1E-26 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily D934_05130 ef0df085fa0a3fd2a57f432fb2d2ddd1 195 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 118 3.0E-34 T 15-10-2018 IPR006531 Gp5 N-terminal D934_05130 ef0df085fa0a3fd2a57f432fb2d2ddd1 195 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 193 5.9E-61 T 15-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 D934_02960 ef0df085fa0a3fd2a57f432fb2d2ddd1 195 Gene3D G3DSA:2.60.220.40 90 157 3.2E-12 T 15-10-2018 D934_02960 ef0df085fa0a3fd2a57f432fb2d2ddd1 195 Gene3D G3DSA:2.40.50.230 2 87 1.1E-26 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily D934_02960 ef0df085fa0a3fd2a57f432fb2d2ddd1 195 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 118 3.0E-34 T 15-10-2018 IPR006531 Gp5 N-terminal D934_02960 ef0df085fa0a3fd2a57f432fb2d2ddd1 195 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 193 5.9E-61 T 15-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 D934_05375 81bd3e8114abf32b4fe660e3e1dfa800 318 PRINTS PR00146 Dihydrodipicolinate synthase signature 145 162 2.1E-25 T 15-10-2018 IPR002220 DapA-like GO:0016829 D934_05375 81bd3e8114abf32b4fe660e3e1dfa800 318 PRINTS PR00146 Dihydrodipicolinate synthase signature 120 136 2.1E-25 T 15-10-2018 IPR002220 DapA-like GO:0016829 D934_05375 81bd3e8114abf32b4fe660e3e1dfa800 318 PRINTS PR00146 Dihydrodipicolinate synthase signature 52 73 2.1E-25 T 15-10-2018 IPR002220 DapA-like GO:0016829 D934_05375 81bd3e8114abf32b4fe660e3e1dfa800 318 PRINTS PR00146 Dihydrodipicolinate synthase signature 88 106 2.1E-25 T 15-10-2018 IPR002220 DapA-like GO:0016829 D934_05375 81bd3e8114abf32b4fe660e3e1dfa800 318 SUPERFAMILY SSF51569 17 302 3.04E-81 T 15-10-2018 D934_05375 81bd3e8114abf32b4fe660e3e1dfa800 318 PIRSF PIRSF001365 17 313 1.7E-76 T 15-10-2018 IPR002220 DapA-like GO:0016829 D934_05375 81bd3e8114abf32b4fe660e3e1dfa800 318 SMART SM01130 18 305 5.1E-105 T 15-10-2018 IPR002220 DapA-like GO:0016829 D934_05375 81bd3e8114abf32b4fe660e3e1dfa800 318 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 18 303 50.545 T 15-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D934_05375 81bd3e8114abf32b4fe660e3e1dfa800 318 Pfam PF00701 Dihydrodipicolinate synthetase family 19 298 3.4E-75 T 15-10-2018 IPR002220 DapA-like GO:0016829 D934_05375 81bd3e8114abf32b4fe660e3e1dfa800 318 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 22 298 1.0E-77 T 15-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D934_05375 81bd3e8114abf32b4fe660e3e1dfa800 318 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 150 180 - T 15-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 D934_05375 81bd3e8114abf32b4fe660e3e1dfa800 318 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 55 72 - T 15-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D934_05375 81bd3e8114abf32b4fe660e3e1dfa800 318 Gene3D G3DSA:3.20.20.70 18 306 2.6E-87 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_01380 c1384f8d96758a655f91234a6e364038 259 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 5 251 9.9E-100 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 D934_01380 c1384f8d96758a655f91234a6e364038 259 Pfam PF00557 Metallopeptidase family M24 13 243 3.1E-54 T 15-10-2018 IPR000994 Peptidase M24 D934_01380 c1384f8d96758a655f91234a6e364038 259 Gene3D G3DSA:3.90.230.10 2 257 7.1E-112 T 15-10-2018 D934_01380 c1384f8d96758a655f91234a6e364038 259 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 D934_01380 c1384f8d96758a655f91234a6e364038 259 Hamap MF_01974 Methionine aminopeptidase [map]. 4 252 42.47 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 D934_01380 c1384f8d96758a655f91234a6e364038 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 3.2E-22 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D934_01380 c1384f8d96758a655f91234a6e364038 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 3.2E-22 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D934_01380 c1384f8d96758a655f91234a6e364038 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 3.2E-22 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D934_01380 c1384f8d96758a655f91234a6e364038 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 3.2E-22 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D934_01380 c1384f8d96758a655f91234a6e364038 259 SUPERFAMILY SSF55920 6 256 6.28E-94 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like D934_11705 43e78ad511dc61aa24e79f214d3c91d3 430 Pfam PF04235 Protein of unknown function (DUF418) 262 418 1.5E-41 T 15-10-2018 IPR007349 Domain of unknown function DUF418 D934_06070 bf61a575ac228147966fc504d328d23d 275 TIGRFAM TIGR00861 MIP: MIP family channel proteins 12 247 2.0E-57 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D934_06070 bf61a575ac228147966fc504d328d23d 275 PRINTS PR00783 Major intrinsic protein family signature 149 167 1.2E-42 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D934_06070 bf61a575ac228147966fc504d328d23d 275 PRINTS PR00783 Major intrinsic protein family signature 231 251 1.2E-42 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D934_06070 bf61a575ac228147966fc504d328d23d 275 PRINTS PR00783 Major intrinsic protein family signature 183 205 1.2E-42 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D934_06070 bf61a575ac228147966fc504d328d23d 275 PRINTS PR00783 Major intrinsic protein family signature 7 26 1.2E-42 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D934_06070 bf61a575ac228147966fc504d328d23d 275 PRINTS PR00783 Major intrinsic protein family signature 49 73 1.2E-42 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D934_06070 bf61a575ac228147966fc504d328d23d 275 PRINTS PR00783 Major intrinsic protein family signature 86 105 1.2E-42 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D934_06070 bf61a575ac228147966fc504d328d23d 275 Pfam PF00230 Major intrinsic protein 4 247 1.1E-48 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 D934_06070 bf61a575ac228147966fc504d328d23d 275 SUPERFAMILY SSF81338 5 253 3.92E-62 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 D934_06070 bf61a575ac228147966fc504d328d23d 275 ProSitePatterns PS00221 MIP family signature. 67 75 - T 15-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 D934_06070 bf61a575ac228147966fc504d328d23d 275 Gene3D G3DSA:1.20.1080.10 2 256 3.2E-76 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 D934_09495 53e0070ca78c9cdefd00561b5eb17775 90 SUPERFAMILY SSF111148 1 89 1.14E-33 T 15-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 D934_09495 53e0070ca78c9cdefd00561b5eb17775 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 4.3E-36 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 D934_09495 53e0070ca78c9cdefd00561b5eb17775 90 Gene3D G3DSA:1.10.3880.10 1 90 3.0E-32 T 15-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 D934_09495 53e0070ca78c9cdefd00561b5eb17775 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 26.303 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 D934_09495 53e0070ca78c9cdefd00561b5eb17775 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 64 1.0E-33 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 D934_09495 53e0070ca78c9cdefd00561b5eb17775 90 PIRSF PIRSF029827 1 90 4.7E-39 T 15-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 D934_02705 92effa2ccaba94cd40f6ddca638b6374 160 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 16 156 3.1E-62 T 15-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D934_02705 92effa2ccaba94cd40f6ddca638b6374 160 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 16 159 32.934 T 15-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D934_02705 92effa2ccaba94cd40f6ddca638b6374 160 Pfam PF07977 FabA-like domain 25 150 4.9E-39 T 15-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D934_02705 92effa2ccaba94cd40f6ddca638b6374 160 Gene3D G3DSA:3.10.129.10 14 158 8.0E-53 T 15-10-2018 D934_02705 92effa2ccaba94cd40f6ddca638b6374 160 SUPERFAMILY SSF54637 15 156 3.74E-43 T 15-10-2018 IPR029069 HotDog domain superfamily D934_06095 8947e836d20407eaae59ce143b517559 758 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D934_06095 8947e836d20407eaae59ce143b517559 758 SUPERFAMILY SSF51726 4 393 1.19E-112 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D934_06095 8947e836d20407eaae59ce143b517559 758 SUPERFAMILY SSF51726 396 757 1.31E-120 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D934_06095 8947e836d20407eaae59ce143b517559 758 Gene3D G3DSA:3.20.20.210 6 524 0.0 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D934_06095 8947e836d20407eaae59ce143b517559 758 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 758 0.0 T 15-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 D934_06095 8947e836d20407eaae59ce143b517559 758 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 311 1.5E-120 T 15-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 D934_06095 8947e836d20407eaae59ce143b517559 758 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 432 753 6.2E-156 T 15-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 D934_06095 8947e836d20407eaae59ce143b517559 758 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 758 37.645 T 15-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 D934_06095 8947e836d20407eaae59ce143b517559 758 PIRSF PIRSF000382 1 758 0.0 T 15-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 D934_07355 9be6bc592626150e7799c5c8881c3871 541 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.3E-5 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 D934_07355 9be6bc592626150e7799c5c8881c3871 541 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.3E-5 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 D934_07355 9be6bc592626150e7799c5c8881c3871 541 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 417 536 3.3E-11 T 15-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_07355 9be6bc592626150e7799c5c8881c3871 541 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 353 3.5E-127 T 15-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 D934_07355 9be6bc592626150e7799c5c8881c3871 541 SMART SM00382 37 188 1.7E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_07355 9be6bc592626150e7799c5c8881c3871 541 SUPERFAMILY SSF52540 34 223 1.6E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_07355 9be6bc592626150e7799c5c8881c3871 541 Gene3D G3DSA:3.40.50.300 13 177 5.4E-102 T 15-10-2018 D934_07355 9be6bc592626150e7799c5c8881c3871 541 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 360 4.1E-25 T 15-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 D934_07355 9be6bc592626150e7799c5c8881c3871 541 Gene3D G3DSA:3.30.300.150 408 521 2.4E-14 T 15-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_07355 9be6bc592626150e7799c5c8881c3871 541 Gene3D G3DSA:1.20.272.10 242 359 2.1E-35 T 15-10-2018 D934_07355 9be6bc592626150e7799c5c8881c3871 541 SUPERFAMILY SSF48019 243 363 6.8E-29 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 D934_07355 9be6bc592626150e7799c5c8881c3871 541 Gene3D G3DSA:1.10.8.60 8 240 5.4E-102 T 15-10-2018 D934_07355 9be6bc592626150e7799c5c8881c3871 541 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.9E-45 T 15-10-2018 D934_07980 d09755e2ece2861d4cb92cabdc39db95 554 SUPERFAMILY SSF52172 7 153 1.85E-35 T 15-10-2018 IPR011006 CheY-like superfamily D934_07980 d09755e2ece2861d4cb92cabdc39db95 554 Gene3D G3DSA:3.30.70.270 151 301 6.3E-12 T 15-10-2018 D934_07980 d09755e2ece2861d4cb92cabdc39db95 554 SMART SM00448 8 121 1.6E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_07980 d09755e2ece2861d4cb92cabdc39db95 554 Gene3D G3DSA:3.20.20.450 307 548 2.3E-40 T 15-10-2018 IPR035919 EAL domain superfamily D934_07980 d09755e2ece2861d4cb92cabdc39db95 554 SUPERFAMILY SSF141868 313 539 1.96E-37 T 15-10-2018 IPR035919 EAL domain superfamily D934_07980 d09755e2ece2861d4cb92cabdc39db95 554 Pfam PF00072 Response regulator receiver domain 10 121 1.2E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_07980 d09755e2ece2861d4cb92cabdc39db95 554 SMART SM00052 302 545 7.2E-11 T 15-10-2018 IPR001633 EAL domain D934_07980 d09755e2ece2861d4cb92cabdc39db95 554 Gene3D G3DSA:3.40.50.2300 2 150 1.1E-34 T 15-10-2018 D934_07980 d09755e2ece2861d4cb92cabdc39db95 554 Pfam PF00990 Diguanylate cyclase, GGDEF domain 149 294 1.2E-6 T 15-10-2018 IPR000160 GGDEF domain D934_07980 d09755e2ece2861d4cb92cabdc39db95 554 SUPERFAMILY SSF55073 150 300 1.18E-12 T 15-10-2018 IPR029787 Nucleotide cyclase D934_07980 d09755e2ece2861d4cb92cabdc39db95 554 Pfam PF00563 EAL domain 313 539 1.0E-34 T 15-10-2018 IPR001633 EAL domain D934_12565 e10ae4405e9b3eac54c78a020c807b22 239 SUPERFAMILY SSF53098 4 180 2.05E-50 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_12565 e10ae4405e9b3eac54c78a020c807b22 239 Pfam PF00929 Exonuclease 8 170 2.3E-32 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D934_12565 e10ae4405e9b3eac54c78a020c807b22 239 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 6 237 2.0E-100 T 15-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_12565 e10ae4405e9b3eac54c78a020c807b22 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 181 3.7E-59 T 15-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_12565 e10ae4405e9b3eac54c78a020c807b22 239 Gene3D G3DSA:3.30.420.10 1 183 1.0E-52 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D934_12565 e10ae4405e9b3eac54c78a020c807b22 239 SMART SM00479 6 179 4.0E-43 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D934_04960 7c8704db7ce8497d6f25afc17b5a82b6 385 Gene3D G3DSA:2.30.40.10 13 382 1.8E-125 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D934_04960 7c8704db7ce8497d6f25afc17b5a82b6 385 SUPERFAMILY SSF51556 62 356 8.17E-99 T 15-10-2018 IPR032466 Metal-dependent hydrolase D934_04960 7c8704db7ce8497d6f25afc17b5a82b6 385 Pfam PF01979 Amidohydrolase family 59 382 7.9E-28 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 D934_04960 7c8704db7ce8497d6f25afc17b5a82b6 385 Gene3D G3DSA:3.20.20.140 63 350 1.8E-125 T 15-10-2018 D934_04960 7c8704db7ce8497d6f25afc17b5a82b6 385 PIRSF PIRSF038994 8 385 1.5E-113 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 D934_04960 7c8704db7ce8497d6f25afc17b5a82b6 385 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 10 382 6.8E-101 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 D934_04960 7c8704db7ce8497d6f25afc17b5a82b6 385 SUPERFAMILY SSF51338 10 375 3.33E-13 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D934_12060 b736ff3205b7521e4d9d4afbf90a9e19 151 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 150 4.0E-69 T 15-10-2018 D934_12060 b736ff3205b7521e4d9d4afbf90a9e19 151 TIGRFAM TIGR02695 azurin: azurin 25 148 1.1E-54 T 15-10-2018 IPR014068 Azurin D934_12060 b736ff3205b7521e4d9d4afbf90a9e19 151 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 24 148 5.4E-19 T 15-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 D934_12060 b736ff3205b7521e4d9d4afbf90a9e19 151 SUPERFAMILY SSF49503 24 147 1.28E-40 T 15-10-2018 IPR008972 Cupredoxin D934_12060 b736ff3205b7521e4d9d4afbf90a9e19 151 Gene3D G3DSA:2.60.40.420 23 149 7.3E-41 T 15-10-2018 IPR008972 Cupredoxin D934_01415 cf5d2ec5ae1c516e86f529f39279f4a3 342 SUPERFAMILY SSF51126 32 301 6.13E-28 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor D934_01415 cf5d2ec5ae1c516e86f529f39279f4a3 342 Gene3D G3DSA:2.160.20.10 37 327 3.3E-26 T 15-10-2018 IPR012334 Pectin lyase fold D934_01415 cf5d2ec5ae1c516e86f529f39279f4a3 342 Pfam PF13229 Right handed beta helix region 144 283 6.8E-17 T 15-10-2018 IPR039448 Right handed beta helix domain D934_01415 cf5d2ec5ae1c516e86f529f39279f4a3 342 SMART SM00710 242 264 780.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat D934_01415 cf5d2ec5ae1c516e86f529f39279f4a3 342 SMART SM00710 173 195 61.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat D934_01415 cf5d2ec5ae1c516e86f529f39279f4a3 342 SMART SM00710 196 218 50.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat D934_01415 cf5d2ec5ae1c516e86f529f39279f4a3 342 SMART SM00710 219 241 710.0 T 15-10-2018 IPR006626 Parallel beta-helix repeat D934_01415 cf5d2ec5ae1c516e86f529f39279f4a3 342 SMART SM00722 121 293 2.2E-12 T 15-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain D934_01415 cf5d2ec5ae1c516e86f529f39279f4a3 342 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 217 256 1.1E-4 T 15-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 D934_02835 37e1788aec5445f62c162b4c378461a6 127 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 18 120 1.8E-27 T 15-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 D934_02835 37e1788aec5445f62c162b4c378461a6 127 Gene3D G3DSA:1.20.1300.10 12 123 1.1E-24 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02835 37e1788aec5445f62c162b4c378461a6 127 SUPERFAMILY SSF81343 12 123 2.13E-26 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_02835 37e1788aec5445f62c162b4c378461a6 127 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 118 2.6E-16 T 15-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D934_08295 12d9e9cd86c3788a563d998b12f33b9e 530 SMART SM00052 271 515 1.1E-92 T 15-10-2018 IPR001633 EAL domain D934_08295 12d9e9cd86c3788a563d998b12f33b9e 530 Gene3D G3DSA:3.20.20.450 274 528 3.0E-85 T 15-10-2018 IPR035919 EAL domain superfamily D934_08295 12d9e9cd86c3788a563d998b12f33b9e 530 Pfam PF00563 EAL domain 277 510 3.7E-68 T 15-10-2018 IPR001633 EAL domain D934_08295 12d9e9cd86c3788a563d998b12f33b9e 530 Pfam PF12792 CSS motif domain associated with EAL 45 240 3.5E-34 T 15-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain D934_08295 12d9e9cd86c3788a563d998b12f33b9e 530 SUPERFAMILY SSF141868 278 521 7.59E-79 T 15-10-2018 IPR035919 EAL domain superfamily D934_07510 ff3f17f6d035a0ce87ccff05bc518803 319 Pfam PF06258 Mitochondrial fission ELM1 19 314 1.3E-74 T 15-10-2018 IPR009367 Mitochondrial fission protein ELM1-like D934_11845 15e19b8d19817b0f3d54e593c6733faf 846 Gene3D G3DSA:3.40.50.2000 197 381 4.5E-52 T 15-10-2018 D934_11845 15e19b8d19817b0f3d54e593c6733faf 846 SUPERFAMILY SSF53756 17 400 7.63E-61 T 15-10-2018 D934_11845 15e19b8d19817b0f3d54e593c6733faf 846 Gene3D G3DSA:3.40.50.2000 639 811 8.1E-28 T 15-10-2018 D934_11845 15e19b8d19817b0f3d54e593c6733faf 846 SUPERFAMILY SSF53756 465 825 5.76E-40 T 15-10-2018 D934_11845 15e19b8d19817b0f3d54e593c6733faf 846 Gene3D G3DSA:3.40.50.2000 17 396 4.5E-52 T 15-10-2018 D934_11845 15e19b8d19817b0f3d54e593c6733faf 846 Pfam PF00534 Glycosyl transferases group 1 220 376 4.1E-25 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 D934_11845 15e19b8d19817b0f3d54e593c6733faf 846 Pfam PF00534 Glycosyl transferases group 1 654 798 3.0E-23 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 D934_11845 15e19b8d19817b0f3d54e593c6733faf 846 Pfam PF13439 Glycosyltransferase Family 4 19 191 1.0E-9 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 Gene3D G3DSA:1.10.287.380 923 994 1.3E-21 T 15-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 SUPERFAMILY SSF52374 2 672 2.38E-126 T 15-10-2018 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 930 994 3.1E-19 T 15-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 994 15.393 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 Gene3D G3DSA:3.90.740.10 257 331 1.1E-8 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 Gene3D G3DSA:3.90.740.10 206 256 2.4E-5 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 Gene3D G3DSA:3.40.50.620 5 204 9.3E-59 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 Gene3D G3DSA:1.10.730.10 610 863 1.7E-64 T 15-10-2018 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 Gene3D G3DSA:3.40.50.620 358 586 1.5E-68 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 SUPERFAMILY SSF47323 673 945 5.05E-57 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 SUPERFAMILY SSF46589 930 994 2.93E-16 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 662 2.3E-191 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 4.7E-30 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 PRINTS PR00986 Valyl-tRNA synthetase signature 251 268 4.7E-30 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 PRINTS PR00986 Valyl-tRNA synthetase signature 502 523 4.7E-30 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 PRINTS PR00986 Valyl-tRNA synthetase signature 537 555 4.7E-30 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 SUPERFAMILY SSF50677 195 398 3.79E-50 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 Pfam PF08264 Anticodon-binding domain of tRNA 718 868 1.0E-38 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 D934_01485 2e3d44ef7dd2f1810a149f7b84be65f8 994 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 976 0.0 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D934_11465 d6d67d1faaa6e41de768698481b8f7ab 231 Pfam PF03379 CcmB protein 16 228 4.8E-62 T 15-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11465 d6d67d1faaa6e41de768698481b8f7ab 231 PIRSF PIRSF002764 8 231 1.3E-71 T 15-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria D934_11465 d6d67d1faaa6e41de768698481b8f7ab 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 87 110 3.5E-44 T 15-10-2018 D934_11465 d6d67d1faaa6e41de768698481b8f7ab 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 64 81 3.5E-44 T 15-10-2018 D934_11465 d6d67d1faaa6e41de768698481b8f7ab 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 38 59 3.5E-44 T 15-10-2018 D934_11465 d6d67d1faaa6e41de768698481b8f7ab 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 167 186 3.5E-44 T 15-10-2018 D934_11465 d6d67d1faaa6e41de768698481b8f7ab 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 112 130 3.5E-44 T 15-10-2018 D934_11465 d6d67d1faaa6e41de768698481b8f7ab 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 204 227 3.5E-44 T 15-10-2018 D934_11465 d6d67d1faaa6e41de768698481b8f7ab 231 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 17 227 3.1E-57 T 15-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria D934_01885 d8c0c0094061d992b05a56bab266257a 400 Gene3D G3DSA:3.40.350.10 1 165 2.4E-44 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D934_01885 d8c0c0094061d992b05a56bab266257a 400 Pfam PF00557 Metallopeptidase family M24 175 382 2.4E-47 T 15-10-2018 IPR000994 Peptidase M24 D934_01885 d8c0c0094061d992b05a56bab266257a 400 Gene3D G3DSA:3.90.230.10 166 398 5.7E-71 T 15-10-2018 D934_01885 d8c0c0094061d992b05a56bab266257a 400 SUPERFAMILY SSF53092 17 165 3.31E-21 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D934_01885 d8c0c0094061d992b05a56bab266257a 400 SUPERFAMILY SSF55920 166 395 1.44E-65 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like D934_01885 d8c0c0094061d992b05a56bab266257a 400 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 166 4.7E-15 T 15-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 D934_09725 b54ef6ef321e88bf6b4f011528ce035a 680 Gene3D G3DSA:1.10.287.950 352 679 5.9E-59 T 15-10-2018 D934_09725 b54ef6ef321e88bf6b4f011528ce035a 680 SMART SM00283 416 677 1.1E-82 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D934_09725 b54ef6ef321e88bf6b4f011528ce035a 680 SUPERFAMILY SSF58104 379 678 1.05E-64 T 15-10-2018 D934_09725 b54ef6ef321e88bf6b4f011528ce035a 680 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 543 572 1.2E-18 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D934_09725 b54ef6ef321e88bf6b4f011528ce035a 680 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 514 541 1.2E-18 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D934_09725 b54ef6ef321e88bf6b4f011528ce035a 680 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 437 466 1.2E-18 T 15-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D934_09725 b54ef6ef321e88bf6b4f011528ce035a 680 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 461 644 9.9E-41 T 15-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D934_06890 75961f2a9416d7e4c1fc2c8ac2df3cd5 252 SMART SM00850 146 243 3.3E-24 T 15-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D934_06890 75961f2a9416d7e4c1fc2c8ac2df3cd5 252 SUPERFAMILY SSF52172 2 120 7.26E-33 T 15-10-2018 IPR011006 CheY-like superfamily D934_06890 75961f2a9416d7e4c1fc2c8ac2df3cd5 252 Pfam PF04397 LytTr DNA-binding domain 148 242 3.7E-22 T 15-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D934_06890 75961f2a9416d7e4c1fc2c8ac2df3cd5 252 SMART SM00448 2 114 7.5E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_06890 75961f2a9416d7e4c1fc2c8ac2df3cd5 252 Pfam PF00072 Response regulator receiver domain 4 114 2.0E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_06890 75961f2a9416d7e4c1fc2c8ac2df3cd5 252 Gene3D G3DSA:3.40.50.2300 1 124 5.6E-34 T 15-10-2018 D934_06890 75961f2a9416d7e4c1fc2c8ac2df3cd5 252 Gene3D G3DSA:2.40.50.40 137 203 7.6E-10 T 15-10-2018 D934_13100 ad713801753cb759fef91f1134608241 522 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 35 343 1.3E-51 T 15-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 D934_13100 ad713801753cb759fef91f1134608241 522 Gene3D G3DSA:2.60.40.290 436 522 1.7E-16 T 15-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 D934_13100 ad713801753cb759fef91f1134608241 522 SMART SM00637 442 521 8.4E-16 T 15-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 D934_13100 ad713801753cb759fef91f1134608241 522 SUPERFAMILY SSF51445 22 370 1.36E-76 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily D934_13100 ad713801753cb759fef91f1134608241 522 SUPERFAMILY SSF49384 438 521 6.56E-20 T 15-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 D934_13100 ad713801753cb759fef91f1134608241 522 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 174 183 - T 15-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 D934_13100 ad713801753cb759fef91f1134608241 522 Gene3D G3DSA:3.20.20.80 21 370 9.8E-115 T 15-10-2018 D934_13100 ad713801753cb759fef91f1134608241 522 Pfam PF00553 Cellulose binding domain 445 521 8.8E-14 T 15-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 D934_08245 25b949ee63597d51f675fee5e7857480 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.238 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D934_08245 25b949ee63597d51f675fee5e7857480 141 SUPERFAMILY SSF54919 1 138 7.33E-56 T 15-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D934_08245 25b949ee63597d51f675fee5e7857480 141 SMART SM00562 3 140 2.4E-82 T 15-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D934_08245 25b949ee63597d51f675fee5e7857480 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.4E-39 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D934_08245 25b949ee63597d51f675fee5e7857480 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.4E-39 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D934_08245 25b949ee63597d51f675fee5e7857480 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.4E-39 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D934_08245 25b949ee63597d51f675fee5e7857480 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.4E-39 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D934_08245 25b949ee63597d51f675fee5e7857480 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.4E-39 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D934_08245 25b949ee63597d51f675fee5e7857480 141 Gene3D G3DSA:3.30.70.141 1 140 2.2E-55 T 15-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D934_08245 25b949ee63597d51f675fee5e7857480 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 6.2E-54 T 15-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D934_08245 25b949ee63597d51f675fee5e7857480 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 15-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D934_06025 e4d1cacd87772bf59181b9983349dfe2 647 SUPERFAMILY SSF56801 9 641 8.77E-182 T 15-10-2018 D934_06025 e4d1cacd87772bf59181b9983349dfe2 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 22 79 2.1E-20 T 15-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 D934_06025 e4d1cacd87772bf59181b9983349dfe2 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 15-10-2018 IPR020845 AMP-binding, conserved site D934_06025 e4d1cacd87772bf59181b9983349dfe2 647 Gene3D G3DSA:3.40.50.12780 48 514 1.0E-99 T 15-10-2018 D934_06025 e4d1cacd87772bf59181b9983349dfe2 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 644 51.421 T 15-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 D934_06025 e4d1cacd87772bf59181b9983349dfe2 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 530 608 9.8E-25 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D934_06025 e4d1cacd87772bf59181b9983349dfe2 647 Pfam PF00501 AMP-binding enzyme 86 521 8.2E-92 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D934_06025 e4d1cacd87772bf59181b9983349dfe2 647 Gene3D G3DSA:3.30.300.30 517 646 5.5E-32 T 15-10-2018 D934_06025 e4d1cacd87772bf59181b9983349dfe2 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 641 5.6E-298 T 15-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 D934_13230 2eae1a24bb65d177664a68ec03609311 275 Hamap MF_00443 Thiazole synthase [thiG]. 20 275 42.417 T 15-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 D934_13230 2eae1a24bb65d177664a68ec03609311 275 Pfam PF05690 Thiazole biosynthesis protein ThiG 23 269 7.2E-110 T 15-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 D934_13230 2eae1a24bb65d177664a68ec03609311 275 Gene3D G3DSA:3.20.20.70 13 275 8.6E-119 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_13230 2eae1a24bb65d177664a68ec03609311 275 SUPERFAMILY SSF110399 19 261 5.75E-88 T 15-10-2018 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 Gene3D G3DSA:3.10.20.30 1 64 1.5E-18 T 15-10-2018 IPR012675 Beta-grasp domain superfamily D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 1.8E-217 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 Gene3D G3DSA:3.30.54.20 131 188 3.4E-58 T 15-10-2018 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 SUPERFAMILY SSF52954 530 631 5.29E-33 T 15-10-2018 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 9.4E-14 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 33.823 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 Gene3D G3DSA:3.30.980.10 70 223 3.4E-58 T 15-10-2018 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 4.9E-52 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 4.9E-52 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 4.9E-52 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 4.9E-52 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 4.9E-52 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 SMART SM00863 171 220 2.5E-19 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 SUPERFAMILY SSF55186 65 242 1.28E-61 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 Gene3D G3DSA:3.30.930.10 224 532 7.0E-125 T 15-10-2018 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 Pfam PF03129 Anticodon binding domain 542 631 2.8E-22 T 15-10-2018 IPR004154 Anticodon-binding D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 SUPERFAMILY SSF55681 244 527 9.57E-95 T 15-10-2018 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 530 3.8E-41 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 Pfam PF02824 TGS domain 2 62 2.1E-8 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 SUPERFAMILY SSF81271 2 62 7.85E-11 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 D934_13425 0bcf2aa41cd73fe31b93250702b294b9 635 Gene3D G3DSA:3.40.50.800 533 634 1.3E-33 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily D934_13360 f295c7fa927a8ddf2bba0d1118aced3a 621 Gene3D G3DSA:3.90.1580.10 336 620 6.3E-69 T 15-10-2018 D934_13360 f295c7fa927a8ddf2bba0d1118aced3a 621 SUPERFAMILY SSF56436 347 620 1.86E-66 T 15-10-2018 IPR016187 C-type lectin fold D934_13360 f295c7fa927a8ddf2bba0d1118aced3a 621 Pfam PF03781 Sulfatase-modifying factor enzyme 1 348 619 4.9E-72 T 15-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 D934_06705 c73e3c2c646505adef4c9e013d52975c 140 ProDom PD298513 SIMILAR PD1186 XF1585/XF1690 PD0970 9 127 1.0E-61 T 15-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC D934_06705 c73e3c2c646505adef4c9e013d52975c 140 Pfam PF10876 Phage tail assemb.y chaperone protein, TAC 7 138 1.6E-64 T 15-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC D934_08595 c73e3c2c646505adef4c9e013d52975c 140 ProDom PD298513 SIMILAR PD1186 XF1585/XF1690 PD0970 9 127 1.0E-61 T 15-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC D934_08595 c73e3c2c646505adef4c9e013d52975c 140 Pfam PF10876 Phage tail assemb.y chaperone protein, TAC 7 138 1.6E-64 T 15-10-2018 IPR020351 Phage tail assemb.y chaperone protein, TAC D934_03450 1d4a4372b9a64a41be6bf18000f56660 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 496 5.0E-181 T 15-10-2018 IPR004482 Mg chelatase-related protein D934_03450 1d4a4372b9a64a41be6bf18000f56660 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 210 225 7.7E-7 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 D934_03450 1d4a4372b9a64a41be6bf18000f56660 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 290 304 7.7E-7 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 D934_03450 1d4a4372b9a64a41be6bf18000f56660 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 318 331 7.7E-7 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 D934_03450 1d4a4372b9a64a41be6bf18000f56660 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 342 354 7.7E-7 T 15-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 D934_03450 1d4a4372b9a64a41be6bf18000f56660 506 Gene3D G3DSA:3.40.50.300 186 499 1.4E-56 T 15-10-2018 D934_03450 1d4a4372b9a64a41be6bf18000f56660 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 404 496 3.5E-28 T 15-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain D934_03450 1d4a4372b9a64a41be6bf18000f56660 506 SMART SM00382 211 393 2.4E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_03450 1d4a4372b9a64a41be6bf18000f56660 506 SUPERFAMILY SSF52540 191 501 1.38E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_03450 1d4a4372b9a64a41be6bf18000f56660 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 4.7E-41 T 15-10-2018 D934_03450 1d4a4372b9a64a41be6bf18000f56660 506 SUPERFAMILY SSF54211 10 168 1.9E-28 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_03450 1d4a4372b9a64a41be6bf18000f56660 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 394 7.3E-95 T 15-10-2018 IPR000523 Magnesium chelatase ChlI domain D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 SMART SM00475 2 256 7.6E-102 T 15-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 Gene3D G3DSA:1.20.1060.10 536 651 3.9E-38 T 15-10-2018 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 SUPERFAMILY SSF56672 516 923 1.56E-149 T 15-10-2018 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 Gene3D G3DSA:3.40.50.1010 4 272 6.0E-85 T 15-10-2018 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 Pfam PF01612 3'-5' exonuclease 323 509 4.3E-31 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 SMART SM00482 679 887 1.2E-101 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 SUPERFAMILY SSF47807 166 280 7.33E-32 T 15-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 SUPERFAMILY SSF53098 320 509 1.2E-47 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 260 2.0E-27 T 15-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 Pfam PF00476 DNA polymerase family A 543 921 2.3E-143 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 Gene3D G3DSA:3.30.70.370 657 919 2.6E-105 T 15-10-2018 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 648 670 1.8E-69 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 838 854 1.8E-69 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 716 1.8E-69 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 1.8E-69 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 747 772 1.8E-69 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 723 736 1.8E-69 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 671 686 1.8E-69 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 784 795 1.8E-69 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 TIGRFAM TIGR00593 pola: DNA polymerase I 4 923 2.3E-262 T 15-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 Gene3D G3DSA:3.30.420.10 321 534 4.5E-60 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 Gene3D G3DSA:1.10.150.20 169 241 6.0E-85 T 15-10-2018 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 SMART SM00279 168 203 6.9E-14 T 15-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 Gene3D G3DSA:1.10.150.20 702 845 2.6E-105 T 15-10-2018 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 SMART SM00474 323 510 2.3E-29 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 SUPERFAMILY SSF88723 1 165 5.05E-48 T 15-10-2018 IPR029060 PIN-like domain superfamily D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 165 4.0E-43 T 15-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 D934_03090 ef9a9c731d2455cff7424813c2364e4f 923 ProSitePatterns PS00447 DNA polymerase family A signature. 747 766 - T 15-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 SUPERFAMILY SSF103647 347 448 4.84E-7 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 PRINTS PR00313 NodO calcium binding signature 905 914 1.2E-10 T 15-10-2018 D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 PRINTS PR00313 NodO calcium binding signature 855 866 1.2E-10 T 15-10-2018 D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 PRINTS PR00313 NodO calcium binding signature 885 893 1.2E-10 T 15-10-2018 D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 PRINTS PR00313 NodO calcium binding signature 867 875 1.2E-10 T 15-10-2018 D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 SUPERFAMILY SSF51120 882 996 5.1E-17 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 926 941 14.0 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 876 892 0.21 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 840 856 0.084 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 904 920 0.94 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 857 874 3.9E-5 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 822 838 8.4 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 845 863 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 Gene3D G3DSA:2.150.10.10 796 874 5.1E-16 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 Gene3D G3DSA:2.150.10.10 875 1012 3.3E-34 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 Pfam PF06594 Haemolysin-type calcium binding protein related domain 960 998 1.8E-10 T 15-10-2018 IPR010566 Haemolysin-type calcium binding-related D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 854 872 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site D934_11205 a526d4e203067fea7cb9caeb5bdee267 1035 SUPERFAMILY SSF51120 821 897 4.45E-20 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_07600 dae7f1c096fe541245948f95f201a5f2 259 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 100 188 2.3E-12 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal D934_07600 dae7f1c096fe541245948f95f201a5f2 259 Pfam PF07282 Putative transposase DNA-binding domain 161 228 4.6E-25 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal D934_07600 dae7f1c096fe541245948f95f201a5f2 259 Pfam PF01385 Probable transposase 20 132 7.9E-29 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 D934_03495 1d24e367d948a8a6e4329b43a91f3938 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 43.298 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D934_03495 1d24e367d948a8a6e4329b43a91f3938 208 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 4.6E-52 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D934_03495 1d24e367d948a8a6e4329b43a91f3938 208 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 4.6E-52 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D934_03495 1d24e367d948a8a6e4329b43a91f3938 208 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 4.6E-52 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D934_03495 1d24e367d948a8a6e4329b43a91f3938 208 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 4.6E-52 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D934_03495 1d24e367d948a8a6e4329b43a91f3938 208 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 4.6E-52 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D934_03495 1d24e367d948a8a6e4329b43a91f3938 208 SUPERFAMILY SSF52096 17 201 8.29E-72 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D934_03495 1d24e367d948a8a6e4329b43a91f3938 208 Gene3D G3DSA:3.90.226.10 2 203 3.3E-82 T 15-10-2018 D934_03495 1d24e367d948a8a6e4329b43a91f3938 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 15-10-2018 IPR018215 ClpP, Ser active site D934_03495 1d24e367d948a8a6e4329b43a91f3938 208 Pfam PF00574 Clp protease 19 199 4.2E-86 T 15-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA D934_03495 1d24e367d948a8a6e4329b43a91f3938 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 15-10-2018 IPR033135 ClpP, histidine active site D934_03495 1d24e367d948a8a6e4329b43a91f3938 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 197 3.8E-104 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D934_05885 41284bab2259fe668aca97cc7064f449 322 PRINTS PR00958 Homoserine kinase signature 188 205 7.4E-23 T 15-10-2018 D934_05885 41284bab2259fe668aca97cc7064f449 322 PRINTS PR00958 Homoserine kinase signature 113 128 7.4E-23 T 15-10-2018 D934_05885 41284bab2259fe668aca97cc7064f449 322 PRINTS PR00958 Homoserine kinase signature 153 166 7.4E-23 T 15-10-2018 D934_05885 41284bab2259fe668aca97cc7064f449 322 PRINTS PR00958 Homoserine kinase signature 267 282 7.4E-23 T 15-10-2018 D934_05885 41284bab2259fe668aca97cc7064f449 322 PRINTS PR00958 Homoserine kinase signature 28 43 7.4E-23 T 15-10-2018 D934_05885 41284bab2259fe668aca97cc7064f449 322 Pfam PF08544 GHMP kinases C terminal 227 300 3.4E-12 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain D934_05885 41284bab2259fe668aca97cc7064f449 322 TIGRFAM TIGR00191 thrB: homoserine kinase 25 290 4.5E-51 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 D934_05885 41284bab2259fe668aca97cc7064f449 322 Gene3D G3DSA:3.30.70.890 180 313 2.9E-31 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily D934_05885 41284bab2259fe668aca97cc7064f449 322 Gene3D G3DSA:3.30.230.10 14 179 1.2E-42 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D934_05885 41284bab2259fe668aca97cc7064f449 322 SUPERFAMILY SSF54211 22 174 1.29E-26 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_05885 41284bab2259fe668aca97cc7064f449 322 SUPERFAMILY SSF55060 187 301 2.4E-24 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily D934_05885 41284bab2259fe668aca97cc7064f449 322 Pfam PF00288 GHMP kinases N terminal domain 100 166 3.5E-12 T 15-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 D934_05885 41284bab2259fe668aca97cc7064f449 322 Hamap MF_00384 Homoserine kinase [thrB]. 23 322 26.161 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 D934_05885 41284bab2259fe668aca97cc7064f449 322 PIRSF PIRSF000676 17 321 8.0E-83 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 D934_08820 8404806fc04017f451707400d1939344 252 Pfam PF01569 PAP2 superfamily 109 235 2.9E-8 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase D934_08820 8404806fc04017f451707400d1939344 252 SUPERFAMILY SSF48317 20 239 5.56E-14 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily D934_03900 4687e1349886a4e6aca72527b94933c4 503 Gene3D G3DSA:3.40.50.1820 45 487 5.1E-26 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_03900 4687e1349886a4e6aca72527b94933c4 503 ProSitePatterns PS00131 Serine carboxypeptidases, serine active site. 204 211 - T 15-10-2018 IPR018202 Serine carboxypeptidase, serine active site D934_03900 4687e1349886a4e6aca72527b94933c4 503 SUPERFAMILY SSF53474 52 483 6.69E-71 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_03900 4687e1349886a4e6aca72527b94933c4 503 Pfam PF00450 Serine carboxypeptidase 91 463 6.1E-21 T 15-10-2018 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 D934_05040 d0352956d2a8c58fa0687018313f300a 183 SUPERFAMILY SSF56235 9 180 7.53E-54 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D934_05040 d0352956d2a8c58fa0687018313f300a 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 12 183 40.593 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 D934_05040 d0352956d2a8c58fa0687018313f300a 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 13 183 5.9E-81 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 D934_05040 d0352956d2a8c58fa0687018313f300a 183 PIRSF PIRSF039093 6 183 8.0E-82 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 D934_05040 d0352956d2a8c58fa0687018313f300a 183 Gene3D G3DSA:3.60.20.10 8 183 4.0E-63 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D934_05040 d0352956d2a8c58fa0687018313f300a 183 Pfam PF00227 Proteasome subunit 9 180 1.6E-21 T 15-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 D934_09945 b283caca005bd3651304f80e88131730 95 Pfam PF07793 Protein of unknown function (DUF1631) 2 83 9.1E-17 T 15-10-2018 IPR012434 Protein of unknown function DUF1631 D934_03405 89c33f1909bbb6d97c811af04849f872 179 Pfam PF00333 Ribosomal protein S5, N-terminal domain 24 85 4.0E-24 T 15-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 D934_03405 89c33f1909bbb6d97c811af04849f872 179 ProSitePatterns PS00585 Ribosomal protein S5 signature. 39 71 - T 15-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site D934_03405 89c33f1909bbb6d97c811af04849f872 179 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 22 173 1.5E-64 T 15-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 D934_03405 89c33f1909bbb6d97c811af04849f872 179 Pfam PF03719 Ribosomal protein S5, C-terminal domain 98 168 1.3E-28 T 15-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 D934_03405 89c33f1909bbb6d97c811af04849f872 179 SUPERFAMILY SSF54211 90 170 1.19E-25 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_03405 89c33f1909bbb6d97c811af04849f872 179 Gene3D G3DSA:3.30.230.10 85 177 7.4E-36 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D934_03405 89c33f1909bbb6d97c811af04849f872 179 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 174 33.554 T 15-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 D934_03405 89c33f1909bbb6d97c811af04849f872 179 Gene3D G3DSA:3.30.160.20 13 83 1.4E-26 T 15-10-2018 D934_03405 89c33f1909bbb6d97c811af04849f872 179 SUPERFAMILY SSF54768 20 87 1.67E-20 T 15-10-2018 D934_06860 35dc59341e7b96390169fa178ce13662 309 SMART SM00418 8 88 6.9E-19 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D934_06860 35dc59341e7b96390169fa178ce13662 309 Pfam PF08241 Methyltransferase domain 152 245 3.3E-22 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 D934_06860 35dc59341e7b96390169fa178ce13662 309 Gene3D G3DSA:1.10.10.10 1 90 4.2E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_06860 35dc59341e7b96390169fa178ce13662 309 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 1.1E-14 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D934_06860 35dc59341e7b96390169fa178ce13662 309 SUPERFAMILY SSF53335 127 293 1.11E-33 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_06860 35dc59341e7b96390169fa178ce13662 309 Gene3D G3DSA:3.40.50.150 134 302 4.4E-33 T 15-10-2018 D934_06860 35dc59341e7b96390169fa178ce13662 309 SUPERFAMILY SSF46785 1 80 4.77E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_06860 35dc59341e7b96390169fa178ce13662 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 5.3E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D934_06860 35dc59341e7b96390169fa178ce13662 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 5.3E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D934_06860 35dc59341e7b96390169fa178ce13662 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 5.3E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D934_06860 35dc59341e7b96390169fa178ce13662 309 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 5.3E-13 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D934_13365 e8387d1be1009c2833bd3f8c7b288a95 362 Gene3D G3DSA:1.10.150.80 192 293 2.8E-6 T 15-10-2018 D934_13365 e8387d1be1009c2833bd3f8c7b288a95 362 Gene3D G3DSA:3.30.420.10 3 190 1.9E-53 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D934_13365 e8387d1be1009c2833bd3f8c7b288a95 362 Gene3D G3DSA:1.10.150.80 295 361 3.6E-5 T 15-10-2018 D934_13365 e8387d1be1009c2833bd3f8c7b288a95 362 SMART SM00474 2 168 1.2E-29 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 D934_13365 e8387d1be1009c2833bd3f8c7b288a95 362 SUPERFAMILY SSF47819 294 358 4.58E-11 T 15-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 D934_13365 e8387d1be1009c2833bd3f8c7b288a95 362 Pfam PF01612 3'-5' exonuclease 3 167 3.1E-26 T 15-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 D934_13365 e8387d1be1009c2833bd3f8c7b288a95 362 SUPERFAMILY SSF53098 2 189 9.0E-55 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_13365 e8387d1be1009c2833bd3f8c7b288a95 362 SUPERFAMILY SSF47819 195 283 3.05E-13 T 15-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 D934_13365 e8387d1be1009c2833bd3f8c7b288a95 362 TIGRFAM TIGR01388 rnd: ribonuclease D 4 358 1.3E-144 T 15-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 D934_02850 024e298ad28650d4f69f6b43b0132b86 82 Pfam PF03937 Flavinator of succinate dehydrogenase 8 74 2.7E-20 T 15-10-2018 IPR005631 Flavinator of succinate dehydrogenase D934_02850 024e298ad28650d4f69f6b43b0132b86 82 SUPERFAMILY SSF109910 3 78 4.32E-21 T 15-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily D934_02850 024e298ad28650d4f69f6b43b0132b86 82 Gene3D G3DSA:1.10.150.250 1 80 1.8E-24 T 15-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily D934_05530 7fa792ff79c4350be17509e1693ba0d2 384 Pfam PF01476 LysM domain 33 78 3.7E-13 T 15-10-2018 IPR018392 LysM domain D934_05530 7fa792ff79c4350be17509e1693ba0d2 384 Gene3D G3DSA:3.10.350.10 31 78 2.3E-15 T 15-10-2018 IPR036779 LysM domain superfamily D934_05530 7fa792ff79c4350be17509e1693ba0d2 384 SMART SM00257 32 80 2.6E-8 T 15-10-2018 IPR018392 LysM domain D934_05530 7fa792ff79c4350be17509e1693ba0d2 384 SUPERFAMILY SSF54106 31 79 2.22E-7 T 15-10-2018 D934_13505 32521a0b558a10f590ae57adb2afc2dd 387 PIRSF PIRSF001554 1 387 5.1E-152 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D934_13505 32521a0b558a10f590ae57adb2afc2dd 387 Gene3D G3DSA:3.40.50.261 240 386 6.6E-56 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D934_13505 32521a0b558a10f590ae57adb2afc2dd 387 Pfam PF00549 CoA-ligase 262 381 1.4E-25 T 15-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D934_13505 32521a0b558a10f590ae57adb2afc2dd 387 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.924 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D934_13505 32521a0b558a10f590ae57adb2afc2dd 387 Pfam PF08442 ATP-grasp domain 2 202 1.7E-73 T 15-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D934_13505 32521a0b558a10f590ae57adb2afc2dd 387 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.1E-160 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D934_13505 32521a0b558a10f590ae57adb2afc2dd 387 SUPERFAMILY SSF52210 239 384 4.84E-52 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D934_13505 32521a0b558a10f590ae57adb2afc2dd 387 Gene3D G3DSA:3.30.1490.20 21 104 2.7E-90 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D934_13505 32521a0b558a10f590ae57adb2afc2dd 387 SUPERFAMILY SSF56059 1 238 9.9E-79 T 15-10-2018 D934_13505 32521a0b558a10f590ae57adb2afc2dd 387 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 15-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D934_13505 32521a0b558a10f590ae57adb2afc2dd 387 Gene3D G3DSA:3.30.470.20 1 234 2.7E-90 T 15-10-2018 D934_01305 ff860d963094871064382dda803bf415 645 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 332 5.9E-46 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D934_01305 ff860d963094871064382dda803bf415 645 Gene3D G3DSA:2.40.50.920 36 109 2.1E-5 T 15-10-2018 D934_01305 ff860d963094871064382dda803bf415 645 SMART SM00382 197 336 6.4E-26 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_01305 ff860d963094871064382dda803bf415 645 Gene3D G3DSA:3.40.50.300 155 333 8.3E-70 T 15-10-2018 D934_01305 ff860d963094871064382dda803bf415 645 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 8 633 37.241 T 15-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 D934_01305 ff860d963094871064382dda803bf415 645 SUPERFAMILY SSF52540 160 404 2.54E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_01305 ff860d963094871064382dda803bf415 645 SUPERFAMILY SSF140990 416 614 1.83E-75 T 15-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 D934_01305 ff860d963094871064382dda803bf415 645 Pfam PF01434 Peptidase family M41 395 605 8.2E-83 T 15-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 D934_01305 ff860d963094871064382dda803bf415 645 Pfam PF06480 FtsH Extracellular 11 101 1.6E-8 T 15-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 D934_01305 ff860d963094871064382dda803bf415 645 Gene3D G3DSA:1.10.8.60 335 412 3.8E-28 T 15-10-2018 D934_01305 ff860d963094871064382dda803bf415 645 Gene3D G3DSA:1.20.58.760 415 612 8.2E-74 T 15-10-2018 D934_01305 ff860d963094871064382dda803bf415 645 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 114 606 1.3E-241 T 15-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 D934_01305 ff860d963094871064382dda803bf415 645 ProSitePatterns PS00674 AAA-protein family signature. 304 322 - T 15-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 D934_08265 ff782a25f9a798c51e9a3a8b706f35e1 212 Pfam PF09976 Tetratricopeptide repeat-like domain 17 202 1.1E-29 T 15-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 D934_08265 ff782a25f9a798c51e9a3a8b706f35e1 212 Gene3D G3DSA:1.25.40.10 42 196 3.5E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Gene3D G3DSA:2.20.25.490 338 394 3.2E-16 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Gene3D G3DSA:2.20.25.490 709 770 3.4E-15 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Gene3D G3DSA:2.20.25.490 585 644 2.4E-16 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Gene3D G3DSA:2.20.25.490 460 519 2.4E-16 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Gene3D G3DSA:2.150.10.10 843 986 2.0E-22 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Pfam PF03895 YadA-like membrane anchor domain 1130 1190 2.2E-18 T 15-10-2018 IPR005594 YadA-like, C-terminal D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 SUPERFAMILY SSF101967 722 840 6.02E-14 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1075 1112 1.2E-9 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 443 484 9.2E-14 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 568 609 9.2E-14 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 318 359 8.0E-9 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 961 994 4.2E-8 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 818 848 6.4E-12 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 693 734 1.8E-14 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 SUPERFAMILY SSF101967 865 983 2.88E-16 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 SUPERFAMILY SSF101967 597 715 1.96E-15 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Gene3D G3DSA:3.30.390.90 396 448 6.4E-11 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Gene3D G3DSA:3.30.390.90 646 698 7.0E-12 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Gene3D G3DSA:3.30.390.90 786 823 4.7E-14 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Gene3D G3DSA:3.30.390.90 521 573 6.4E-11 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Gene3D G3DSA:3.30.1300.30 1094 1190 1.7E-31 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Gene3D G3DSA:2.150.10.10 152 337 9.2E-28 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Gene3D G3DSA:2.150.10.10 987 1093 6.2E-27 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 SUPERFAMILY SSF101967 343 465 7.85E-15 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Pfam PF05658 Head domain of trimeric autotransporter adhesin 897 923 1.3E-7 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1017 1043 1.1E-5 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 SUPERFAMILY SSF101967 472 590 1.12E-14 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 SUPERFAMILY SSF101967 1007 1096 3.53E-24 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 SUPERFAMILY SSF101967 176 338 7.72E-17 T 15-10-2018 D934_09850 dbe9cb6186af5c2d8265910146697f98 1190 SUPERFAMILY SSF54523 1086 1190 9.42E-24 T 15-10-2018 D934_11865 2aef28ef9f7e26e02d09a1e4dea3a287 297 SUPERFAMILY SSF103088 202 280 3.66E-7 T 15-10-2018 IPR036737 OmpA-like domain superfamily D934_13580 443dc27202163b5ccb4591df75b5b2e0 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.2E-20 T 15-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13580 443dc27202163b5ccb4591df75b5b2e0 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 15-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13580 443dc27202163b5ccb4591df75b5b2e0 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 5.1E-41 T 15-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_13580 443dc27202163b5ccb4591df75b5b2e0 149 SUPERFAMILY SSF55658 1 57 1.31E-17 T 15-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal D934_13580 443dc27202163b5ccb4591df75b5b2e0 149 SUPERFAMILY SSF55653 61 146 3.27E-21 T 15-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily D934_13580 443dc27202163b5ccb4591df75b5b2e0 149 Gene3D G3DSA:3.10.430.100 61 147 2.3E-22 T 15-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily D934_13580 443dc27202163b5ccb4591df75b5b2e0 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 4.7E-20 T 15-10-2018 IPR020069 Ribosomal protein L9, C-terminal D934_13580 443dc27202163b5ccb4591df75b5b2e0 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 23.713 T 15-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_13580 443dc27202163b5ccb4591df75b5b2e0 149 Gene3D G3DSA:3.40.5.10 1 50 9.7E-22 T 15-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_07535 ff81d7d2f900f04de8f46b519ea94428 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.6E-41 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D934_07535 ff81d7d2f900f04de8f46b519ea94428 112 PRINTS PR00340 P-II protein signature 83 103 7.5E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D934_07535 ff81d7d2f900f04de8f46b519ea94428 112 PRINTS PR00340 P-II protein signature 2 17 7.5E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D934_07535 ff81d7d2f900f04de8f46b519ea94428 112 PRINTS PR00340 P-II protein signature 52 75 7.5E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D934_07535 ff81d7d2f900f04de8f46b519ea94428 112 PRINTS PR00340 P-II protein signature 23 41 7.5E-44 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D934_07535 ff81d7d2f900f04de8f46b519ea94428 112 SUPERFAMILY SSF54913 1 112 2.39E-44 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta D934_07535 ff81d7d2f900f04de8f46b519ea94428 112 SMART SM00938 4 105 2.0E-61 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D934_07535 ff81d7d2f900f04de8f46b519ea94428 112 PIRSF PIRSF039144 1 112 3.2E-52 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D934_07535 ff81d7d2f900f04de8f46b519ea94428 112 Gene3D G3DSA:3.30.70.120 1 112 2.7E-44 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal D934_07535 ff81d7d2f900f04de8f46b519ea94428 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 15-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 D934_12795 f3e59239315ff34318c7169ff37e31be 395 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 321 353 0.34 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat D934_12795 f3e59239315ff34318c7169ff37e31be 395 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 353 392 1.4E-7 T 15-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat D934_12795 f3e59239315ff34318c7169ff37e31be 395 Gene3D G3DSA:2.160.20.10 74 369 1.0E-100 T 15-10-2018 IPR012334 Pectin lyase fold D934_12795 f3e59239315ff34318c7169ff37e31be 395 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 1.1E-8 T 15-10-2018 IPR024973 ESPR domain D934_12795 f3e59239315ff34318c7169ff37e31be 395 SUPERFAMILY SSF51126 76 359 7.85E-62 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor D934_12795 f3e59239315ff34318c7169ff37e31be 395 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 106 202 1.3E-25 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal D934_12795 f3e59239315ff34318c7169ff37e31be 395 Pfam PF05594 Haemagluttinin repeat 365 394 7.5 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat D934_12795 f3e59239315ff34318c7169ff37e31be 395 Pfam PF05594 Haemagluttinin repeat 312 363 0.0033 T 15-10-2018 IPR008619 Filamentous haemagglutinin repeat D934_12795 f3e59239315ff34318c7169ff37e31be 395 SMART SM00912 87 207 3.2E-46 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal D934_12795 f3e59239315ff34318c7169ff37e31be 395 Pfam PF05860 haemagglutination activity domain 74 205 4.8E-33 T 15-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal D934_04160 97b7d28017109d1f3d164cf98e9e3140 180 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 28.101 T 15-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 D934_04160 97b7d28017109d1f3d164cf98e9e3140 180 SUPERFAMILY SSF52540 5 165 1.54E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04160 97b7d28017109d1f3d164cf98e9e3140 180 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 15-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 D934_04160 97b7d28017109d1f3d164cf98e9e3140 180 Gene3D G3DSA:3.40.50.300 4 179 8.0E-53 T 15-10-2018 D934_04160 97b7d28017109d1f3d164cf98e9e3140 180 Pfam PF01202 Shikimate kinase 13 166 8.5E-49 T 15-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 D934_04160 97b7d28017109d1f3d164cf98e9e3140 180 PRINTS PR01100 Shikimate kinase family signature 98 115 1.7E-21 T 15-10-2018 D934_04160 97b7d28017109d1f3d164cf98e9e3140 180 PRINTS PR01100 Shikimate kinase family signature 77 86 1.7E-21 T 15-10-2018 D934_04160 97b7d28017109d1f3d164cf98e9e3140 180 PRINTS PR01100 Shikimate kinase family signature 7 22 1.7E-21 T 15-10-2018 D934_04160 97b7d28017109d1f3d164cf98e9e3140 180 PRINTS PR01100 Shikimate kinase family signature 59 67 1.7E-21 T 15-10-2018 D934_04160 97b7d28017109d1f3d164cf98e9e3140 180 PRINTS PR01100 Shikimate kinase family signature 31 44 1.7E-21 T 15-10-2018 D934_03365 c4e8abd7680f312b3d973590ba093938 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 85 22.488 T 15-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03365 c4e8abd7680f312b3d973590ba093938 88 Pfam PF00366 Ribosomal protein S17 15 82 2.0E-30 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03365 c4e8abd7680f312b3d973590ba093938 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 11 81 1.0E-35 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03365 c4e8abd7680f312b3d973590ba093938 88 SUPERFAMILY SSF50249 10 86 3.73E-30 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_03365 c4e8abd7680f312b3d973590ba093938 88 Gene3D G3DSA:2.40.50.140 7 87 4.9E-33 T 15-10-2018 D934_03365 c4e8abd7680f312b3d973590ba093938 88 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 1.6E-10 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03365 c4e8abd7680f312b3d973590ba093938 88 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 1.6E-10 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03365 c4e8abd7680f312b3d973590ba093938 88 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 1.6E-10 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03365 c4e8abd7680f312b3d973590ba093938 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 11 81 1.7E-32 T 15-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_01950 2f1a53e27e0f1d4e1486d374e2bdff21 502 Gene3D G3DSA:3.40.50.10490 90 267 1.8E-159 T 15-10-2018 D934_01950 2f1a53e27e0f1d4e1486d374e2bdff21 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 132 151 4.6E-45 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_01950 2f1a53e27e0f1d4e1486d374e2bdff21 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 237 255 4.6E-45 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_01950 2f1a53e27e0f1d4e1486d374e2bdff21 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 422 440 4.6E-45 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_01950 2f1a53e27e0f1d4e1486d374e2bdff21 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 440 454 4.6E-45 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_01950 2f1a53e27e0f1d4e1486d374e2bdff21 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 314 335 4.6E-45 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_01950 2f1a53e27e0f1d4e1486d374e2bdff21 502 PRINTS PR00662 Glucose-6-phosphate isomerase signature 454 467 4.6E-45 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_01950 2f1a53e27e0f1d4e1486d374e2bdff21 502 SUPERFAMILY SSF53697 5 486 8.9E-148 T 15-10-2018 D934_01950 2f1a53e27e0f1d4e1486d374e2bdff21 502 Pfam PF00342 Phosphoglucose isomerase 45 495 6.9E-140 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_01950 2f1a53e27e0f1d4e1486d374e2bdff21 502 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 454 471 - T 15-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_01950 2f1a53e27e0f1d4e1486d374e2bdff21 502 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 241 254 - T 15-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_01950 2f1a53e27e0f1d4e1486d374e2bdff21 502 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 38 481 36.543 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_01950 2f1a53e27e0f1d4e1486d374e2bdff21 502 Gene3D G3DSA:1.10.1390.10 464 502 2.6E-11 T 15-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_01950 2f1a53e27e0f1d4e1486d374e2bdff21 502 Gene3D G3DSA:3.40.50.10490 6 463 1.8E-159 T 15-10-2018 D934_11535 b267f7dda19b92edbe0b65ca6f282c5b 447 Pfam PF01979 Amidohydrolase family 68 415 9.9E-63 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 D934_11535 b267f7dda19b92edbe0b65ca6f282c5b 447 Gene3D G3DSA:2.30.40.10 14 435 2.5E-161 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D934_11535 b267f7dda19b92edbe0b65ca6f282c5b 447 SUPERFAMILY SSF51338 12 442 9.12E-21 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D934_11535 b267f7dda19b92edbe0b65ca6f282c5b 447 Gene3D G3DSA:3.20.20.140 71 361 2.5E-161 T 15-10-2018 D934_11535 b267f7dda19b92edbe0b65ca6f282c5b 447 SUPERFAMILY SSF51556 70 369 4.68E-94 T 15-10-2018 IPR032466 Metal-dependent hydrolase D934_09860 ee9a8ec1c93c0bb2ff73385f93422c24 187 Gene3D G3DSA:2.160.10.10 3 186 1.7E-60 T 15-10-2018 D934_09860 ee9a8ec1c93c0bb2ff73385f93422c24 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 3.3E-4 T 15-10-2018 IPR001451 Hexapeptide repeat D934_09860 ee9a8ec1c93c0bb2ff73385f93422c24 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 1.9E-6 T 15-10-2018 IPR001451 Hexapeptide repeat D934_09860 ee9a8ec1c93c0bb2ff73385f93422c24 187 SUPERFAMILY SSF51161 3 175 4.71E-46 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily D934_12820 ca279cdca3d8046ff303509298a33dfb 808 Pfam PF00905 Penicillin binding protein transpeptidase domain 443 692 4.3E-15 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 D934_12820 ca279cdca3d8046ff303509298a33dfb 808 PIRSF PIRSF002799 4 786 1.5E-263 T 15-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_12820 ca279cdca3d8046ff303509298a33dfb 808 SUPERFAMILY SSF53955 165 366 5.06E-55 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_12820 ca279cdca3d8046ff303509298a33dfb 808 Pfam PF14814 Bifunctional transglycosylase second domain 75 159 1.2E-19 T 15-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_12820 ca279cdca3d8046ff303509298a33dfb 808 SUPERFAMILY SSF56601 327 769 4.12E-96 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D934_12820 ca279cdca3d8046ff303509298a33dfb 808 Gene3D G3DSA:1.10.3810.10 163 369 1.2E-215 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_12820 ca279cdca3d8046ff303509298a33dfb 808 Pfam PF00912 Transglycosylase 166 345 1.0E-50 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_12820 ca279cdca3d8046ff303509298a33dfb 808 Gene3D G3DSA:3.30.2060.10 73 162 1.2E-215 T 15-10-2018 D934_12820 ca279cdca3d8046ff303509298a33dfb 808 Gene3D G3DSA:3.40.710.10 65 725 1.2E-215 T 15-10-2018 D934_12820 ca279cdca3d8046ff303509298a33dfb 808 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 30 764 0.0 T 15-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_09955 0ae41a4c660b43c06419825cc451c548 458 Pfam PF07793 Protein of unknown function (DUF1631) 4 439 2.1E-74 T 15-10-2018 IPR012434 Protein of unknown function DUF1631 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 Gene3D G3DSA:1.10.287.470 259 324 1.7E-17 T 15-10-2018 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 Gene3D G3DSA:1.10.287.470 129 221 1.3E-7 T 15-10-2018 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 394 417 1.8E-58 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 437 452 1.8E-58 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 370 394 1.8E-58 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 88 1.8E-58 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 337 358 1.8E-58 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 107 127 1.8E-58 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 452 472 1.8E-58 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 ProSitePatterns PS00543 HlyD family secretion proteins signature. 437 459 - T 15-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 Pfam PF13437 HlyD family secretion protein 324 430 5.7E-19 T 15-10-2018 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 Gene3D G3DSA:2.40.50.100 94 128 1.3E-7 T 15-10-2018 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 Gene3D G3DSA:2.40.50.100 325 361 1.7E-17 T 15-10-2018 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 Gene3D G3DSA:2.40.30.170 362 450 1.7E-17 T 15-10-2018 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 Gene3D G3DSA:2.40.30.170 83 93 1.3E-7 T 15-10-2018 D934_11175 73995eac24107d93e2fa2e9f5476836b 473 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 55 473 1.4E-120 T 15-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 D934_02525 b4716deea77782bc271d7c8eff26482e 401 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 15-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D934_02525 b4716deea77782bc271d7c8eff26482e 401 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 397 38.384 T 15-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D934_02525 b4716deea77782bc271d7c8eff26482e 401 Gene3D G3DSA:3.40.50.620 6 174 5.9E-103 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_02525 b4716deea77782bc271d7c8eff26482e 401 Pfam PF00764 Arginosuccinate synthase 7 392 3.9E-85 T 15-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D934_02525 b4716deea77782bc271d7c8eff26482e 401 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 394 1.8E-83 T 15-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D934_02525 b4716deea77782bc271d7c8eff26482e 401 SUPERFAMILY SSF69864 174 398 1.7E-58 T 15-10-2018 D934_02525 b4716deea77782bc271d7c8eff26482e 401 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 15-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D934_02525 b4716deea77782bc271d7c8eff26482e 401 Gene3D G3DSA:3.90.1260.10 65 352 5.9E-103 T 15-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D934_02525 b4716deea77782bc271d7c8eff26482e 401 SUPERFAMILY SSF52402 3 185 9.26E-34 T 15-10-2018 D934_08175 32543c99f5537e2d27ef040f1ed69e95 156 Gene3D G3DSA:3.40.630.30 13 156 4.6E-38 T 15-10-2018 D934_08175 32543c99f5537e2d27ef040f1ed69e95 156 Pfam PF00583 Acetyltransferase (GNAT) family 22 129 3.7E-12 T 15-10-2018 IPR000182 GNAT domain D934_08175 32543c99f5537e2d27ef040f1ed69e95 156 SUPERFAMILY SSF55729 11 152 8.58E-29 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase D934_08175 32543c99f5537e2d27ef040f1ed69e95 156 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 20 151 1.7E-49 T 15-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 D934_04375 ecc9b5c64555dee77030de8c82f78849 981 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 12 962 25.37 T 15-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 D934_04375 ecc9b5c64555dee77030de8c82f78849 981 SUPERFAMILY SSF53383 21 437 1.96E-100 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D934_04375 ecc9b5c64555dee77030de8c82f78849 981 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 21 956 0.0 T 15-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 D934_04375 ecc9b5c64555dee77030de8c82f78849 981 Gene3D G3DSA:3.40.640.10 99 357 2.4E-107 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D934_04375 ecc9b5c64555dee77030de8c82f78849 981 Gene3D G3DSA:3.40.640.10 520 745 9.0E-59 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D934_04375 ecc9b5c64555dee77030de8c82f78849 981 Gene3D G3DSA:3.90.1150.10 770 909 1.2E-39 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D934_04375 ecc9b5c64555dee77030de8c82f78849 981 SUPERFAMILY SSF53383 471 957 4.9E-97 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D934_04375 ecc9b5c64555dee77030de8c82f78849 981 Pfam PF02347 Glycine cleavage system P-protein 446 802 3.9E-11 T 15-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 D934_04375 ecc9b5c64555dee77030de8c82f78849 981 Pfam PF02347 Glycine cleavage system P-protein 20 441 7.8E-175 T 15-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 D934_13645 63b460c96465311045c3be61fd36afb1 421 Gene3D G3DSA:3.20.20.20 16 302 2.9E-93 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D934_13645 63b460c96465311045c3be61fd36afb1 421 Gene3D G3DSA:3.30.413.10 303 419 2.3E-35 T 15-10-2018 D934_13645 63b460c96465311045c3be61fd36afb1 421 SUPERFAMILY SSF56014 308 405 3.66E-5 T 15-10-2018 D934_13645 63b460c96465311045c3be61fd36afb1 421 PIRSF PIRSF004640 12 418 2.4E-121 T 15-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 D934_13645 63b460c96465311045c3be61fd36afb1 421 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 19 408 4.1E-113 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 D934_13645 63b460c96465311045c3be61fd36afb1 421 Pfam PF04551 GcpE protein 22 409 1.2E-105 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 D934_13645 63b460c96465311045c3be61fd36afb1 421 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 17 411 28.431 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 D934_10205 902518b550efac3b0371d43d9aa72d88 299 Pfam PF02649 Type I GTP cyclohydrolase folE2 7 294 3.2E-65 T 15-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 D934_10205 902518b550efac3b0371d43d9aa72d88 299 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 6 299 32.38 T 15-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 D934_06635 b81e30a28ff177ef46b83cf3206458a7 462 TIGRFAM TIGR01555 phge_rel_HI1409: phage-associated protein, HI1409 family 24 429 1.6E-199 T 15-10-2018 IPR006445 Phage-associated protein HI1409 D934_06635 b81e30a28ff177ef46b83cf3206458a7 462 Pfam PF06381 Protein of unknown function (DUF1073) 55 404 1.6E-120 T 15-10-2018 IPR024459 Protein of unknown function DUF1073 D934_06790 088d4e081ee04b924be901849af50668 192 PIRSF PIRSF000303 4 188 1.1E-55 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D934_06790 088d4e081ee04b924be901849af50668 192 PRINTS PR01011 Glutathione peroxidase family signature 50 67 6.7E-15 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D934_06790 088d4e081ee04b924be901849af50668 192 PRINTS PR01011 Glutathione peroxidase family signature 146 155 6.7E-15 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D934_06790 088d4e081ee04b924be901849af50668 192 PRINTS PR01011 Glutathione peroxidase family signature 85 101 6.7E-15 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D934_06790 088d4e081ee04b924be901849af50668 192 Gene3D G3DSA:3.40.30.10 25 191 6.3E-51 T 15-10-2018 D934_06790 088d4e081ee04b924be901849af50668 192 Pfam PF00255 Glutathione peroxidase 36 138 1.7E-32 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D934_06790 088d4e081ee04b924be901849af50668 192 SUPERFAMILY SSF52833 30 184 2.18E-47 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_06790 088d4e081ee04b924be901849af50668 192 ProSitePatterns PS00460 Glutathione peroxidases active site. 52 67 - T 15-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 D934_07450 3b8c0e78b44c12056ffb42500ef7e2b7 332 Gene3D G3DSA:3.40.50.720 1 330 4.0E-75 T 15-10-2018 D934_07450 3b8c0e78b44c12056ffb42500ef7e2b7 332 SUPERFAMILY SSF51735 1 326 1.55E-65 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_07450 3b8c0e78b44c12056ffb42500ef7e2b7 332 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 4 248 2.7E-50 T 15-10-2018 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 D934_11155 ee4106e0ecb7cab0ef29be18f62e47e2 308 SUPERFAMILY SSF52833 8 104 4.42E-32 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_11155 ee4106e0ecb7cab0ef29be18f62e47e2 308 Gene3D G3DSA:3.40.30.10 10 104 2.6E-32 T 15-10-2018 D934_11155 ee4106e0ecb7cab0ef29be18f62e47e2 308 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 9 103 3.2E-41 T 15-10-2018 IPR004480 Monothiol glutaredoxin-related D934_11155 ee4106e0ecb7cab0ef29be18f62e47e2 308 Pfam PF00462 Glutaredoxin 20 84 3.2E-19 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 D934_11155 ee4106e0ecb7cab0ef29be18f62e47e2 308 SUPERFAMILY SSF89360 114 201 2.94E-11 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D934_11155 ee4106e0ecb7cab0ef29be18f62e47e2 308 SMART SM00450 208 303 7.9E-12 T 15-10-2018 IPR001763 Rhodanese-like domain D934_11155 ee4106e0ecb7cab0ef29be18f62e47e2 308 Pfam PF00581 Rhodanese-like domain 210 298 4.3E-7 T 15-10-2018 IPR001763 Rhodanese-like domain D934_11155 ee4106e0ecb7cab0ef29be18f62e47e2 308 Gene3D G3DSA:2.60.300.12 115 199 8.8E-6 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D934_11155 ee4106e0ecb7cab0ef29be18f62e47e2 308 Gene3D G3DSA:3.40.250.10 200 305 8.8E-16 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily D934_11155 ee4106e0ecb7cab0ef29be18f62e47e2 308 SUPERFAMILY SSF52821 202 306 7.55E-19 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily D934_03885 8cb0c2d8a6dddc71814ffee281a9e038 168 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 31 148 3.2E-49 T 15-10-2018 IPR008769 Poly granule associated D934_03885 8cb0c2d8a6dddc71814ffee281a9e038 168 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 23 146 1.2E-38 T 15-10-2018 IPR008769 Poly granule associated D934_07415 ba6a7fc00c796ab37f2a773daa92b0a6 324 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 1.6E-35 T 15-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D934_07415 ba6a7fc00c796ab37f2a773daa92b0a6 324 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 187 7.0E-34 T 15-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D934_07415 ba6a7fc00c796ab37f2a773daa92b0a6 324 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 324 72.015 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D934_07415 ba6a7fc00c796ab37f2a773daa92b0a6 324 Gene3D G3DSA:3.40.47.10 2 324 3.0E-132 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_07415 ba6a7fc00c796ab37f2a773daa92b0a6 324 SUPERFAMILY SSF53901 7 324 5.19E-71 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_07415 ba6a7fc00c796ab37f2a773daa92b0a6 324 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 323 1.9E-137 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D934_00605 9602d1be18d60f9812b733f6e334994d 286 SUPERFAMILY SSF116734 87 283 3.92E-19 T 15-10-2018 D934_00605 9602d1be18d60f9812b733f6e334994d 286 Pfam PF01420 Type I restriction modification DNA specificity domain 3 54 1.5E-8 T 15-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 D934_00605 9602d1be18d60f9812b733f6e334994d 286 Pfam PF01420 Type I restriction modification DNA specificity domain 103 265 5.6E-8 T 15-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 D934_00605 9602d1be18d60f9812b733f6e334994d 286 SUPERFAMILY SSF116734 3 65 1.36E-11 T 15-10-2018 D934_00605 9602d1be18d60f9812b733f6e334994d 286 Gene3D G3DSA:3.90.220.20 219 275 7.0E-6 T 15-10-2018 D934_00605 9602d1be18d60f9812b733f6e334994d 286 Gene3D G3DSA:3.90.220.20 107 123 4.0E-9 T 15-10-2018 D934_00605 9602d1be18d60f9812b733f6e334994d 286 Gene3D G3DSA:3.90.220.20 3 26 4.0E-9 T 15-10-2018 D934_00605 9602d1be18d60f9812b733f6e334994d 286 Gene3D G3DSA:1.10.287.1120 27 106 4.0E-9 T 15-10-2018 D934_03645 bb883ff381b64865c1884a3fb91f9a7e 707 Gene3D G3DSA:3.90.70.10 1 136 1.4E-38 T 15-10-2018 D934_03645 bb883ff381b64865c1884a3fb91f9a7e 707 SMART SM00382 498 682 2.1E-19 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_03645 bb883ff381b64865c1884a3fb91f9a7e 707 SUPERFAMILY SSF90123 138 459 6.54E-61 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D934_03645 bb883ff381b64865c1884a3fb91f9a7e 707 Pfam PF00005 ABC transporter 489 638 6.4E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_03645 bb883ff381b64865c1884a3fb91f9a7e 707 Pfam PF00664 ABC transporter transmembrane region 159 420 6.4E-36 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D934_03645 bb883ff381b64865c1884a3fb91f9a7e 707 Gene3D G3DSA:3.40.50.300 463 701 3.1E-76 T 15-10-2018 D934_03645 bb883ff381b64865c1884a3fb91f9a7e 707 SUPERFAMILY SSF52540 464 685 7.48E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_03645 bb883ff381b64865c1884a3fb91f9a7e 707 Gene3D G3DSA:1.20.1560.10 143 458 4.6E-65 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D934_03645 bb883ff381b64865c1884a3fb91f9a7e 707 Pfam PF03412 Peptidase C39 family 3 128 6.4E-36 T 15-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 D934_03645 bb883ff381b64865c1884a3fb91f9a7e 707 ProSitePatterns PS00211 ABC transporters family signature. 610 624 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_03060 e470dc81f2ab37253715e08abff6096a 199 Pfam PF03358 NADPH-dependent FMN reductase 64 130 3.3E-9 T 15-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 D934_03060 e470dc81f2ab37253715e08abff6096a 199 Gene3D G3DSA:3.40.50.360 1 196 4.4E-60 T 15-10-2018 IPR029039 Flavoprotein-like superfamily D934_03060 e470dc81f2ab37253715e08abff6096a 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 195 2.1E-44 T 15-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 D934_03060 e470dc81f2ab37253715e08abff6096a 199 SUPERFAMILY SSF52218 1 195 5.21E-55 T 15-10-2018 IPR029039 Flavoprotein-like superfamily D934_05895 76881c1e0b4118337ef31c376cc1975b 314 PRINTS PR00101 Aspartate carbamoyltransferase signature 141 158 7.9E-30 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 PRINTS PR00101 Aspartate carbamoyltransferase signature 292 306 7.9E-30 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 PRINTS PR00101 Aspartate carbamoyltransferase signature 46 68 7.9E-30 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 PRINTS PR00101 Aspartate carbamoyltransferase signature 227 236 7.9E-30 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 PRINTS PR00101 Aspartate carbamoyltransferase signature 268 273 7.9E-30 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 PRINTS PR00101 Aspartate carbamoyltransferase signature 84 93 7.9E-30 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 56 63 - T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 10 153 8.7E-34 T 15-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 163 309 1.2E-23 T 15-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 Gene3D G3DSA:3.40.50.1370 142 298 1.2E-82 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 276 299 7.2E-23 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 142 153 7.2E-23 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 273 7.2E-23 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 56 75 7.2E-23 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 Gene3D G3DSA:3.40.50.1370 10 309 1.2E-82 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 SUPERFAMILY SSF53671 8 312 1.03E-86 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 10 311 1.2E-81 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_05895 76881c1e0b4118337ef31c376cc1975b 314 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 9 313 38.011 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_10540 12ac52b74527338c5260433a85384db3 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 195 8.6E-52 T 15-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 D934_10540 12ac52b74527338c5260433a85384db3 200 SUPERFAMILY SSF52972 1 196 7.59E-70 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D934_10540 12ac52b74527338c5260433a85384db3 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 3 197 47.623 T 15-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 D934_10540 12ac52b74527338c5260433a85384db3 200 Gene3D G3DSA:3.90.950.10 1 198 1.5E-71 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D934_10540 12ac52b74527338c5260433a85384db3 200 Pfam PF01725 Ham1 family 5 193 4.5E-51 T 15-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 D934_03180 066ec79ab871606f85d70d903c8a7b49 320 PRINTS PR00502 NUDIX hydrolase family signature 51 66 5.0E-8 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D934_03180 066ec79ab871606f85d70d903c8a7b49 320 PRINTS PR00502 NUDIX hydrolase family signature 37 51 5.0E-8 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D934_03180 066ec79ab871606f85d70d903c8a7b49 320 Gene3D G3DSA:3.20.20.70 131 318 3.3E-48 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_03180 066ec79ab871606f85d70d903c8a7b49 320 SUPERFAMILY SSF55811 6 130 3.38E-32 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D934_03180 066ec79ab871606f85d70d903c8a7b49 320 Gene3D G3DSA:3.90.79.10 5 130 8.2E-32 T 15-10-2018 D934_03180 066ec79ab871606f85d70d903c8a7b49 320 Pfam PF02581 Thiamine monophosphate synthase 136 312 1.5E-42 T 15-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D934_03180 066ec79ab871606f85d70d903c8a7b49 320 Pfam PF00293 NUDIX domain 11 124 7.0E-17 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D934_03180 066ec79ab871606f85d70d903c8a7b49 320 SUPERFAMILY SSF51391 118 314 9.16E-49 T 15-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D934_03180 066ec79ab871606f85d70d903c8a7b49 320 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D934_10715 ffa8af16ef63d95714f92a8ca333db88 158 Gene3D G3DSA:3.30.420.10 59 137 1.1E-5 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D934_10715 ffa8af16ef63d95714f92a8ca333db88 158 Pfam PF13610 DDE domain 65 143 1.9E-28 T 15-10-2018 IPR032874 DDE domain D934_10715 ffa8af16ef63d95714f92a8ca333db88 158 SUPERFAMILY SSF53098 63 130 3.41E-8 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_11500 ee33fe84ff7c43fc7c15e3f7e0c7aec2 219 SUPERFAMILY SSF48452 67 181 6.75E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_11500 ee33fe84ff7c43fc7c15e3f7e0c7aec2 219 Gene3D G3DSA:1.25.40.10 68 216 1.6E-22 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_11500 ee33fe84ff7c43fc7c15e3f7e0c7aec2 219 Pfam PF07719 Tetratricopeptide repeat 86 118 2.6E-6 T 15-10-2018 IPR013105 Tetratricopeptide repeat 2 D934_11500 ee33fe84ff7c43fc7c15e3f7e0c7aec2 219 Pfam PF13432 Tetratricopeptide repeat 141 178 0.0036 T 15-10-2018 D934_11500 ee33fe84ff7c43fc7c15e3f7e0c7aec2 219 SMART SM00028 85 118 0.0044 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 Pfam PF05524 PEP-utilising enzyme, N-terminal 21 142 4.7E-21 T 15-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 463 481 - T 15-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 SUPERFAMILY SSF47831 43 157 4.84E-25 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 SUPERFAMILY SSF51621 264 562 4.45E-91 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 Gene3D G3DSA:3.20.20.60 249 588 7.7E-107 T 15-10-2018 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 Pfam PF00391 PEP-utilising enzyme, mobile domain 168 240 4.6E-15 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 Gene3D G3DSA:3.50.30.10 22 248 1.4E-54 T 15-10-2018 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 Gene3D G3DSA:1.10.274.10 39 162 1.4E-54 T 15-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 PIRSF PIRSF000732 15 590 5.5E-194 T 15-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 463 478 9.8E-26 T 15-10-2018 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 480 495 9.8E-26 T 15-10-2018 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 516 528 9.8E-26 T 15-10-2018 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 308 327 9.8E-26 T 15-10-2018 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 20 578 1.4E-140 T 15-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 SUPERFAMILY SSF52009 129 248 8.63E-25 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 D934_04670 08747d6fbe9fd3b37af1a8ea2f242559 590 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 267 556 6.0E-95 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 D934_05875 0b7a701220014ba7e4bf91c5591ef667 466 SUPERFAMILY SSF55681 4 361 8.36E-70 T 15-10-2018 D934_05875 0b7a701220014ba7e4bf91c5591ef667 466 Pfam PF13393 Histidyl-tRNA synthetase 9 350 9.9E-30 T 15-10-2018 D934_05875 0b7a701220014ba7e4bf91c5591ef667 466 PIRSF PIRSF001549 1 460 6.7E-133 T 15-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 D934_05875 0b7a701220014ba7e4bf91c5591ef667 466 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 458 28.072 T 15-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 D934_05875 0b7a701220014ba7e4bf91c5591ef667 466 Gene3D G3DSA:3.30.930.10 1 363 5.8E-101 T 15-10-2018 D934_05875 0b7a701220014ba7e4bf91c5591ef667 466 Gene3D G3DSA:3.40.50.800 365 460 1.1E-22 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily D934_05875 0b7a701220014ba7e4bf91c5591ef667 466 Pfam PF03129 Anticodon binding domain 369 457 1.9E-12 T 15-10-2018 IPR004154 Anticodon-binding D934_05875 0b7a701220014ba7e4bf91c5591ef667 466 SUPERFAMILY SSF52954 366 457 4.68E-21 T 15-10-2018 D934_05875 0b7a701220014ba7e4bf91c5591ef667 466 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 448 1.9E-115 T 15-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 D934_06255 9efc4bb7642aa9d36715f072a3d61474 71 Gene3D G3DSA:1.10.260.40 5 55 8.7E-6 T 15-10-2018 D934_06255 9efc4bb7642aa9d36715f072a3d61474 71 SUPERFAMILY SSF47413 18 63 8.84E-8 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_06255 9efc4bb7642aa9d36715f072a3d61474 71 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 11 37 5.6E-5 T 15-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 D934_02610 0085021a37eaecd4d05950d107d6818a 452 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 24 443 38.106 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 D934_02610 0085021a37eaecd4d05950d107d6818a 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 223 246 5.8E-58 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 D934_02610 0085021a37eaecd4d05950d107d6818a 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 355 372 5.8E-58 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 D934_02610 0085021a37eaecd4d05950d107d6818a 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 387 406 5.8E-58 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 D934_02610 0085021a37eaecd4d05950d107d6818a 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 171 192 5.8E-58 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 D934_02610 0085021a37eaecd4d05950d107d6818a 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 327 346 5.8E-58 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 D934_02610 0085021a37eaecd4d05950d107d6818a 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 146 165 5.8E-58 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 D934_02610 0085021a37eaecd4d05950d107d6818a 452 PRINTS PR00447 Natural resistance-associated macrophage protein signature 118 144 5.8E-58 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 D934_02610 0085021a37eaecd4d05950d107d6818a 452 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 39 411 1.3E-112 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 D934_02610 0085021a37eaecd4d05950d107d6818a 452 Pfam PF01566 Natural resistance-associated macrophage protein 59 415 3.9E-127 T 15-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 D934_09795 d7c5c5010689bcd795dc826abe89c808 534 PIRSF PIRSF015855 3 523 8.3E-149 T 15-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 D934_09795 d7c5c5010689bcd795dc826abe89c808 534 SUPERFAMILY SSF53335 60 380 3.99E-55 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_09795 d7c5c5010689bcd795dc826abe89c808 534 Pfam PF01555 DNA methylase 85 377 1.3E-41 T 15-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 D934_09795 d7c5c5010689bcd795dc826abe89c808 534 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 327 349 3.1E-17 T 15-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 D934_09795 d7c5c5010689bcd795dc826abe89c808 534 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 85 97 3.1E-17 T 15-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 D934_09795 d7c5c5010689bcd795dc826abe89c808 534 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 126 145 3.1E-17 T 15-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 D934_09795 d7c5c5010689bcd795dc826abe89c808 534 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 350 364 3.1E-17 T 15-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 SUPERFAMILY SSF55347 151 314 1.07E-73 T 15-10-2018 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 Gene3D G3DSA:3.40.50.720 4 327 1.8E-147 T 15-10-2018 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 PIRSF PIRSF000149 1 334 2.8E-125 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 8.3E-129 T 15-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 Gene3D G3DSA:3.30.360.10 151 316 1.8E-147 T 15-10-2018 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 5.7E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 5.7E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 5.7E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 5.7E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 5.7E-47 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 SMART SM00846 3 152 2.4E-93 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 15-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 2.5E-36 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 8.2E-63 T 15-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_08240 bdc3e366c12bf5402405ad7e82f34c36 334 SUPERFAMILY SSF51735 3 168 2.85E-66 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_13745 bc66e78f5c5c5ea45ae90909d7b95c41 87 Gene3D G3DSA:2.10.260.10 1 86 2.5E-12 T 15-10-2018 D934_13745 bc66e78f5c5c5ea45ae90909d7b95c41 87 SMART SM00966 7 52 1.7E-4 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D934_13745 bc66e78f5c5c5ea45ae90909d7b95c41 87 SUPERFAMILY SSF89447 2 63 2.62E-12 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily D934_07205 79546fdbf79e443c0096324da2217693 243 Pfam PF00912 Transglycosylase 69 224 3.7E-42 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_07205 79546fdbf79e443c0096324da2217693 243 Gene3D G3DSA:1.10.3810.10 62 236 9.4E-45 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_07205 79546fdbf79e443c0096324da2217693 243 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 17 235 2.0E-77 T 15-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_07205 79546fdbf79e443c0096324da2217693 243 SUPERFAMILY SSF53955 62 235 9.28E-54 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_07205 79546fdbf79e443c0096324da2217693 243 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 16 237 40.159 T 15-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_11930 d75a31864c9b16a884738b810ce05b12 233 Gene3D G3DSA:1.10.8.60 164 229 6.6E-23 T 15-10-2018 D934_11930 d75a31864c9b16a884738b810ce05b12 233 SUPERFAMILY SSF52540 21 209 4.68E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_11930 d75a31864c9b16a884738b810ce05b12 233 Gene3D G3DSA:3.40.50.300 2 160 5.2E-25 T 15-10-2018 D934_11930 d75a31864c9b16a884738b810ce05b12 233 SMART SM00382 40 163 1.0E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_11930 d75a31864c9b16a884738b810ce05b12 233 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 229 1.9E-71 T 15-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 D934_11930 d75a31864c9b16a884738b810ce05b12 233 Pfam PF01695 IstB-like ATP binding protein 28 87 1.3E-6 T 15-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 D934_03500 3f30cf9c5f7c8567917f704e813ce175 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 7 417 53.11 T 15-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 D934_03500 3f30cf9c5f7c8567917f704e813ce175 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 14 414 7.9E-204 T 15-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 D934_03500 3f30cf9c5f7c8567917f704e813ce175 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 2.8E-49 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D934_03500 3f30cf9c5f7c8567917f704e813ce175 426 Gene3D G3DSA:3.40.50.300 59 317 1.4E-108 T 15-10-2018 D934_03500 3f30cf9c5f7c8567917f704e813ce175 426 Pfam PF06689 ClpX C4-type zinc finger 16 53 3.4E-20 T 15-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 D934_03500 3f30cf9c5f7c8567917f704e813ce175 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 1.3E-15 T 15-10-2018 IPR019489 Clp ATPase, C-terminal D934_03500 3f30cf9c5f7c8567917f704e813ce175 426 Gene3D G3DSA:3.30.50.30 6 55 1.6E-24 T 15-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily D934_03500 3f30cf9c5f7c8567917f704e813ce175 426 Gene3D G3DSA:1.10.8.60 318 426 4.2E-40 T 15-10-2018 D934_03500 3f30cf9c5f7c8567917f704e813ce175 426 SMART SM00382 113 265 1.4E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_03500 3f30cf9c5f7c8567917f704e813ce175 426 SUPERFAMILY SSF52540 64 406 1.74E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_03500 3f30cf9c5f7c8567917f704e813ce175 426 SMART SM01086 319 414 8.0E-31 T 15-10-2018 IPR019489 Clp ATPase, C-terminal D934_03500 3f30cf9c5f7c8567917f704e813ce175 426 SUPERFAMILY SSF57716 16 51 1.28E-11 T 15-10-2018 D934_03500 3f30cf9c5f7c8567917f704e813ce175 426 SMART SM00994 15 54 9.8E-24 T 15-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 D934_13660 f412fdd50e9cab0436be580f86196eb0 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 289 7.9E-99 T 15-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D934_13660 f412fdd50e9cab0436be580f86196eb0 292 Gene3D G3DSA:1.10.8.10 1 55 1.6E-26 T 15-10-2018 D934_13660 f412fdd50e9cab0436be580f86196eb0 292 SUPERFAMILY SSF46934 1 55 4.38E-19 T 15-10-2018 IPR009060 UBA-like superfamily GO:0005515 D934_13660 f412fdd50e9cab0436be580f86196eb0 292 Gene3D G3DSA:3.30.479.20 153 271 1.3E-39 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 D934_13660 f412fdd50e9cab0436be580f86196eb0 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 73.713 T 15-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D934_13660 f412fdd50e9cab0436be580f86196eb0 292 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 15-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D934_13660 f412fdd50e9cab0436be580f86196eb0 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 15-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D934_13660 f412fdd50e9cab0436be580f86196eb0 292 SUPERFAMILY SSF54713 55 144 5.89E-20 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 D934_13660 f412fdd50e9cab0436be580f86196eb0 292 Gene3D G3DSA:1.10.286.20 189 237 1.3E-39 T 15-10-2018 D934_13660 f412fdd50e9cab0436be580f86196eb0 292 Pfam PF00889 Elongation factor TS 70 272 1.3E-65 T 15-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 D934_13660 f412fdd50e9cab0436be580f86196eb0 292 SUPERFAMILY SSF54713 149 289 1.7E-46 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 D934_13660 f412fdd50e9cab0436be580f86196eb0 292 Gene3D G3DSA:3.30.479.20 56 147 1.7E-25 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 D934_05320 571911d666a481a0a75544358ac86232 726 SUPERFAMILY SSF56672 186 724 8.67E-67 T 15-10-2018 D934_05320 571911d666a481a0a75544358ac86232 726 Gene3D G3DSA:3.30.420.10 8 193 1.0E-5 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D934_05320 571911d666a481a0a75544358ac86232 726 SMART SM00482 372 690 1.5E-6 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_05320 571911d666a481a0a75544358ac86232 726 SUPERFAMILY SSF53098 30 177 1.52E-9 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_05320 571911d666a481a0a75544358ac86232 726 Pfam PF00476 DNA polymerase family A 266 498 3.4E-10 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_11130 2e8d3fad7dd450312b7ff3115b0eb636 349 SMART SM00829 13 342 2.8E-4 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D934_11130 2e8d3fad7dd450312b7ff3115b0eb636 349 SUPERFAMILY SSF50129 8 171 1.1E-44 T 15-10-2018 IPR011032 GroES-like superfamily D934_11130 2e8d3fad7dd450312b7ff3115b0eb636 349 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 178 205 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 D934_11130 2e8d3fad7dd450312b7ff3115b0eb636 349 Pfam PF00107 Zinc-binding dehydrogenase 185 308 5.1E-26 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D934_11130 2e8d3fad7dd450312b7ff3115b0eb636 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 142 2.3E-23 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D934_11130 2e8d3fad7dd450312b7ff3115b0eb636 349 SUPERFAMILY SSF51735 151 312 2.53E-43 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_11130 2e8d3fad7dd450312b7ff3115b0eb636 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 D934_11130 2e8d3fad7dd450312b7ff3115b0eb636 349 Gene3D G3DSA:3.90.180.10 13 342 5.1E-129 T 15-10-2018 D934_11130 2e8d3fad7dd450312b7ff3115b0eb636 349 Gene3D G3DSA:3.40.50.720 159 314 5.1E-129 T 15-10-2018 D934_04950 f8c0a9de7a3877a0ac2c7cdae73188e2 358 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 9.3E-18 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D934_04950 f8c0a9de7a3877a0ac2c7cdae73188e2 358 Pfam PF13377 Periplasmic binding protein-like domain 175 341 8.0E-35 T 15-10-2018 D934_04950 f8c0a9de7a3877a0ac2c7cdae73188e2 358 Gene3D G3DSA:3.40.50.2300 59 313 4.6E-64 T 15-10-2018 D934_04950 f8c0a9de7a3877a0ac2c7cdae73188e2 358 SMART SM00354 3 75 1.4E-18 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D934_04950 f8c0a9de7a3877a0ac2c7cdae73188e2 358 SUPERFAMILY SSF53822 66 343 5.5E-62 T 15-10-2018 IPR028082 Periplasmic binding protein-like I D934_04950 f8c0a9de7a3877a0ac2c7cdae73188e2 358 Gene3D G3DSA:1.10.260.40 1 58 1.3E-20 T 15-10-2018 D934_04950 f8c0a9de7a3877a0ac2c7cdae73188e2 358 Gene3D G3DSA:3.40.50.2300 167 296 4.6E-64 T 15-10-2018 D934_04950 f8c0a9de7a3877a0ac2c7cdae73188e2 358 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 5.0E-5 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D934_04950 f8c0a9de7a3877a0ac2c7cdae73188e2 358 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 5.0E-5 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D934_04950 f8c0a9de7a3877a0ac2c7cdae73188e2 358 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 15-10-2018 D934_04950 f8c0a9de7a3877a0ac2c7cdae73188e2 358 SUPERFAMILY SSF47413 2 52 1.23E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_00150 7a36eb46b27251d6afb146268af19d79 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 22 40 - T 15-10-2018 IPR019844 Cold-shock conserved site D934_00150 7a36eb46b27251d6afb146268af19d79 73 SMART SM00357 10 73 1.1E-25 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 D934_00150 7a36eb46b27251d6afb146268af19d79 73 Pfam PF00313 'Cold-shock' DNA-binding domain 11 72 2.0E-27 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D934_00150 7a36eb46b27251d6afb146268af19d79 73 PRINTS PR00050 Cold shock protein signature 11 26 1.2E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D934_00150 7a36eb46b27251d6afb146268af19d79 73 PRINTS PR00050 Cold shock protein signature 46 64 1.2E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D934_00150 7a36eb46b27251d6afb146268af19d79 73 PRINTS PR00050 Cold shock protein signature 31 40 1.2E-16 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D934_00150 7a36eb46b27251d6afb146268af19d79 73 PIRSF PIRSF002599 4 73 2.0E-21 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 D934_00150 7a36eb46b27251d6afb146268af19d79 73 Gene3D G3DSA:2.40.50.140 8 72 1.0E-26 T 15-10-2018 D934_00150 7a36eb46b27251d6afb146268af19d79 73 SUPERFAMILY SSF50249 8 72 1.64E-23 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_00415 3946e08ba50eacd44d16c841657a40d8 630 SUPERFAMILY SSF52096 328 534 2.07E-38 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D934_00415 3946e08ba50eacd44d16c841657a40d8 630 SUPERFAMILY SSF52096 59 287 9.32E-19 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D934_00415 3946e08ba50eacd44d16c841657a40d8 630 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 355 546 9.4E-52 T 15-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 D934_00415 3946e08ba50eacd44d16c841657a40d8 630 Gene3D G3DSA:3.90.226.10 95 318 3.9E-152 T 15-10-2018 D934_00415 3946e08ba50eacd44d16c841657a40d8 630 Gene3D G3DSA:3.90.226.10 319 547 3.9E-152 T 15-10-2018 D934_00415 3946e08ba50eacd44d16c841657a40d8 630 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 19 577 7.5E-156 T 15-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 D934_00415 3946e08ba50eacd44d16c841657a40d8 630 PIRSF PIRSF001217 10 630 8.4E-196 T 15-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 D934_00415 3946e08ba50eacd44d16c841657a40d8 630 Pfam PF01343 Peptidase family S49 397 548 1.4E-47 T 15-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 D934_00415 3946e08ba50eacd44d16c841657a40d8 630 Pfam PF01343 Peptidase family S49 140 294 4.0E-23 T 15-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 D934_00415 3946e08ba50eacd44d16c841657a40d8 630 Gene3D G3DSA:3.40.1750.10 186 504 3.9E-152 T 15-10-2018 D934_08220 d2252dac2c0691e06002916e41f0360d 379 Gene3D G3DSA:3.30.479.30 94 225 5.7E-18 T 15-10-2018 D934_08220 d2252dac2c0691e06002916e41f0360d 379 PRINTS PR00721 Stomatin signature 118 139 2.3E-9 T 15-10-2018 IPR001972 Stomatin family GO:0016020 D934_08220 d2252dac2c0691e06002916e41f0360d 379 PRINTS PR00721 Stomatin signature 70 92 2.3E-9 T 15-10-2018 IPR001972 Stomatin family GO:0016020 D934_08220 d2252dac2c0691e06002916e41f0360d 379 PRINTS PR00721 Stomatin signature 153 170 2.3E-9 T 15-10-2018 IPR001972 Stomatin family GO:0016020 D934_08220 d2252dac2c0691e06002916e41f0360d 379 PRINTS PR00721 Stomatin signature 199 217 2.3E-9 T 15-10-2018 IPR001972 Stomatin family GO:0016020 D934_08220 d2252dac2c0691e06002916e41f0360d 379 TIGRFAM TIGR01933 hflK: HflK protein 65 322 8.4E-106 T 15-10-2018 IPR010201 HflK GO:0016021 D934_08220 d2252dac2c0691e06002916e41f0360d 379 Pfam PF01145 SPFH domain / Band 7 family 68 238 4.8E-29 T 15-10-2018 IPR001107 Band 7 domain D934_08220 d2252dac2c0691e06002916e41f0360d 379 SMART SM00244 63 223 1.3E-34 T 15-10-2018 IPR001107 Band 7 domain D934_08220 d2252dac2c0691e06002916e41f0360d 379 SUPERFAMILY SSF117892 96 230 2.48E-20 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily D934_11260 e46a1fc4ef4dbd70c2b2b5087be08b9a 219 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 59 215 16.39 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D934_11260 e46a1fc4ef4dbd70c2b2b5087be08b9a 219 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 114 2.0E-15 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D934_11260 e46a1fc4ef4dbd70c2b2b5087be08b9a 219 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 154 169 2.0E-15 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D934_11260 e46a1fc4ef4dbd70c2b2b5087be08b9a 219 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 190 206 2.0E-15 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D934_11260 e46a1fc4ef4dbd70c2b2b5087be08b9a 219 ProSitePatterns PS00855 Signal peptidases II signature. 157 169 - T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D934_11260 e46a1fc4ef4dbd70c2b2b5087be08b9a 219 Pfam PF01252 Signal peptidase (SPase) II 68 209 7.0E-36 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D934_11260 e46a1fc4ef4dbd70c2b2b5087be08b9a 219 TIGRFAM TIGR00077 lspA: signal peptidase II 60 214 6.9E-41 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D934_12545 a12f2a1b3b2755536285994305f37a85 350 SUPERFAMILY SSF53756 8 343 7.12E-74 T 15-10-2018 D934_12545 a12f2a1b3b2755536285994305f37a85 350 Gene3D G3DSA:3.40.50.2000 160 342 1.5E-36 T 15-10-2018 D934_12545 a12f2a1b3b2755536285994305f37a85 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 82 305 3.3E-43 T 15-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 D934_12545 a12f2a1b3b2755536285994305f37a85 350 Gene3D G3DSA:3.40.50.2000 3 154 3.4E-19 T 15-10-2018 D934_08270 92cdbfba02f45b6226957de1477eba7b 411 Pfam PF13360 PQQ-like domain 59 111 1.0E-4 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat D934_08270 92cdbfba02f45b6226957de1477eba7b 411 Pfam PF13360 PQQ-like domain 127 336 1.1E-42 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat D934_08270 92cdbfba02f45b6226957de1477eba7b 411 SUPERFAMILY SSF50998 42 399 3.53E-76 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily D934_08270 92cdbfba02f45b6226957de1477eba7b 411 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 10 408 1.1E-118 T 15-10-2018 IPR017687 Outer membrane protein assembly factor BamB D934_08270 92cdbfba02f45b6226957de1477eba7b 411 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 5 409 36.245 T 15-10-2018 IPR017687 Outer membrane protein assembly factor BamB D934_08270 92cdbfba02f45b6226957de1477eba7b 411 Gene3D G3DSA:2.130.10.10 34 410 7.2E-93 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D934_08270 92cdbfba02f45b6226957de1477eba7b 411 SMART SM00564 131 163 7.2E-6 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D934_08270 92cdbfba02f45b6226957de1477eba7b 411 SMART SM00564 268 299 0.66 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D934_08270 92cdbfba02f45b6226957de1477eba7b 411 SMART SM00564 76 107 1.1E-4 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D934_08270 92cdbfba02f45b6226957de1477eba7b 411 SMART SM00564 216 248 0.54 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D934_08270 92cdbfba02f45b6226957de1477eba7b 411 SMART SM00564 305 337 52.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D934_08270 92cdbfba02f45b6226957de1477eba7b 411 SMART SM00564 172 203 2.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D934_04200 4fcd1c4ac9a9ccd909dacea6b3a3b2b6 286 SUPERFAMILY SSF161098 23 271 9.35E-57 T 15-10-2018 IPR035906 MetI-like superfamily D934_04200 4fcd1c4ac9a9ccd909dacea6b3a3b2b6 286 Gene3D G3DSA:1.10.3720.10 22 279 9.5E-69 T 15-10-2018 IPR035906 MetI-like superfamily D934_04200 4fcd1c4ac9a9ccd909dacea6b3a3b2b6 286 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 13 275 3.8E-95 T 15-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 D934_04200 4fcd1c4ac9a9ccd909dacea6b3a3b2b6 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 275 4.3E-24 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D934_04200 4fcd1c4ac9a9ccd909dacea6b3a3b2b6 286 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 16 278 1.5E-123 T 15-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 D934_04090 f57780fe62f39a91f8ad10c6d5a5a699 395 SUPERFAMILY SSF55136 299 370 5.75E-5 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily D934_04090 f57780fe62f39a91f8ad10c6d5a5a699 395 SUPERFAMILY SSF55961 28 156 3.3E-5 T 15-10-2018 D934_04090 f57780fe62f39a91f8ad10c6d5a5a699 395 Gene3D G3DSA:3.20.80.10 302 381 3.0E-5 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily D934_13320 93392e21991b177a7e864e3bb5c7aa3a 191 Pfam PF00692 dUTPase 81 186 3.9E-7 T 15-10-2018 IPR029054 dUTPase-like D934_13320 93392e21991b177a7e864e3bb5c7aa3a 191 Hamap MF_00146 dCTP deaminase [dcd]. 1 191 27.871 T 15-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 D934_13320 93392e21991b177a7e864e3bb5c7aa3a 191 SUPERFAMILY SSF51283 3 190 1.96E-50 T 15-10-2018 IPR036157 dUTPase-like superfamily D934_13320 93392e21991b177a7e864e3bb5c7aa3a 191 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 190 2.8E-47 T 15-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 D934_13320 93392e21991b177a7e864e3bb5c7aa3a 191 Gene3D G3DSA:2.70.40.10 1 160 1.7E-53 T 15-10-2018 IPR036157 dUTPase-like superfamily D934_04825 f352c5f0b9ef80fb97e7b9a02cace13f 256 Gene3D G3DSA:3.60.10.10 8 253 1.5E-35 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D934_04825 f352c5f0b9ef80fb97e7b9a02cace13f 256 SUPERFAMILY SSF56219 9 252 1.09E-30 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D934_04825 f352c5f0b9ef80fb97e7b9a02cace13f 256 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 12 241 4.3E-11 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase D934_03595 bd9fe933422d6904f97a885d982e7413 467 Gene3D G3DSA:3.30.870.10 296 441 2.6E-22 T 15-10-2018 D934_03595 bd9fe933422d6904f97a885d982e7413 467 SMART SM00155 209 236 2.3E-4 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 D934_03595 bd9fe933422d6904f97a885d982e7413 467 SMART SM00155 380 407 0.47 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 D934_03595 bd9fe933422d6904f97a885d982e7413 467 SUPERFAMILY SSF56024 258 454 1.01E-42 T 15-10-2018 D934_03595 bd9fe933422d6904f97a885d982e7413 467 SUPERFAMILY SSF56024 100 296 1.47E-44 T 15-10-2018 D934_03595 bd9fe933422d6904f97a885d982e7413 467 Pfam PF13091 PLD-like domain 310 429 4.9E-24 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 D934_03595 bd9fe933422d6904f97a885d982e7413 467 Pfam PF13091 PLD-like domain 125 266 1.6E-17 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 D934_03595 bd9fe933422d6904f97a885d982e7413 467 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 464 3.0E-101 T 15-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 D934_03595 bd9fe933422d6904f97a885d982e7413 467 Gene3D G3DSA:3.30.870.10 108 293 2.1E-32 T 15-10-2018 D934_02190 fefd5bbe04ac21c9ce92b3622e514296 298 SUPERFAMILY SSF51735 1 292 5.79E-41 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_02190 fefd5bbe04ac21c9ce92b3622e514296 298 Pfam PF08338 Domain of unknown function (DUF1731) 249 294 3.1E-14 T 15-10-2018 IPR013549 Domain of unknown function DUF1731 D934_02190 fefd5bbe04ac21c9ce92b3622e514296 298 Gene3D G3DSA:3.40.50.720 1 285 1.9E-73 T 15-10-2018 D934_02190 fefd5bbe04ac21c9ce92b3622e514296 298 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 4 291 2.1E-96 T 15-10-2018 IPR010099 Epimerase family protein SDR39U1 D934_02190 fefd5bbe04ac21c9ce92b3622e514296 298 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 221 2.0E-17 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 D934_07620 c703d8a5aaaab1e7a9d0de393359c85c 532 SMART SM00245 318 505 1.2E-11 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D934_07620 c703d8a5aaaab1e7a9d0de393359c85c 532 Gene3D G3DSA:3.30.750.44 466 480 1.1E-30 T 15-10-2018 D934_07620 c703d8a5aaaab1e7a9d0de393359c85c 532 Gene3D G3DSA:3.30.750.44 46 126 9.3E-6 T 15-10-2018 D934_07620 c703d8a5aaaab1e7a9d0de393359c85c 532 SUPERFAMILY SSF52096 269 523 5.47E-51 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D934_07620 c703d8a5aaaab1e7a9d0de393359c85c 532 Pfam PF03572 Peptidase family S41 350 503 5.9E-22 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D934_07620 c703d8a5aaaab1e7a9d0de393359c85c 532 Pfam PF14684 Tricorn protease C1 domain 44 102 4.2E-8 T 15-10-2018 IPR028204 Tricorn protease C1 domain D934_07620 c703d8a5aaaab1e7a9d0de393359c85c 532 Gene3D G3DSA:3.90.226.10 332 502 1.1E-30 T 15-10-2018 D934_07620 c703d8a5aaaab1e7a9d0de393359c85c 532 Gene3D G3DSA:2.30.42.10 261 331 1.1E-30 T 15-10-2018 D934_07620 c703d8a5aaaab1e7a9d0de393359c85c 532 Gene3D G3DSA:2.30.42.10 127 166 9.3E-6 T 15-10-2018 D934_01540 0a9df262a1780b32c6761a686c305a74 285 Gene3D G3DSA:2.30.140.10 3 58 4.0E-19 T 15-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 D934_01540 0a9df262a1780b32c6761a686c305a74 285 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 4.0E-80 T 15-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 D934_01540 0a9df262a1780b32c6761a686c305a74 285 Pfam PF01564 Spermine/spermidine synthase domain 63 246 1.6E-51 T 15-10-2018 D934_01540 0a9df262a1780b32c6761a686c305a74 285 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 36.45 T 15-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 D934_01540 0a9df262a1780b32c6761a686c305a74 285 Pfam PF17284 Spermidine synthase tetramerisation domain 7 58 6.1E-11 T 15-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 D934_01540 0a9df262a1780b32c6761a686c305a74 285 SUPERFAMILY SSF53335 7 284 2.86E-74 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_01540 0a9df262a1780b32c6761a686c305a74 285 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 83 96 - T 15-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 D934_01540 0a9df262a1780b32c6761a686c305a74 285 Gene3D G3DSA:3.40.50.150 59 285 1.5E-60 T 15-10-2018 D934_04335 7258232dfb94f2ede60c77dc375df77f 446 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 53 442 50.276 T 15-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D934_04335 7258232dfb94f2ede60c77dc375df77f 446 SUPERFAMILY SSF53686 54 439 9.04E-142 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D934_04335 7258232dfb94f2ede60c77dc375df77f 446 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 58 440 8.2E-183 T 15-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D934_04335 7258232dfb94f2ede60c77dc375df77f 446 Gene3D G3DSA:3.40.50.1100 61 257 8.8E-178 T 15-10-2018 D934_04335 7258232dfb94f2ede60c77dc375df77f 446 Gene3D G3DSA:3.40.50.1100 105 435 8.8E-178 T 15-10-2018 D934_04335 7258232dfb94f2ede60c77dc375df77f 446 PIRSF PIRSF001413 41 446 3.1E-155 T 15-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D934_04335 7258232dfb94f2ede60c77dc375df77f 446 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 104 429 1.4E-46 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D934_04335 7258232dfb94f2ede60c77dc375df77f 446 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 132 146 - T 15-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D934_03930 da97c68ddf0dc96aa39c5c13c75fbd77 295 SUPERFAMILY SSF51569 18 289 6.14E-105 T 15-10-2018 D934_03930 da97c68ddf0dc96aa39c5c13c75fbd77 295 Pfam PF00793 DAHP synthetase I family 27 284 1.1E-64 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D934_03930 da97c68ddf0dc96aa39c5c13c75fbd77 295 Gene3D G3DSA:3.20.20.70 15 294 1.1E-100 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_03930 da97c68ddf0dc96aa39c5c13c75fbd77 295 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 32 288 4.9E-129 T 15-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D934_03930 da97c68ddf0dc96aa39c5c13c75fbd77 295 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 27 289 52.121 T 15-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D934_04715 be7a94f8cfefd5bb653657d0c44cf497 189 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 11 184 1.1E-42 T 15-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related D934_04715 be7a94f8cfefd5bb653657d0c44cf497 189 Gene3D G3DSA:2.60.450.10 60 188 3.6E-13 T 15-10-2018 D934_04715 be7a94f8cfefd5bb653657d0c44cf497 189 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 186 20.176 T 15-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 D934_04715 be7a94f8cfefd5bb653657d0c44cf497 189 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 9 183 4.4E-42 T 15-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 D934_06535 0e5d45e7716c4de0795decc2187e9f94 96 SUPERFAMILY SSF81301 4 96 9.4E-18 T 15-10-2018 D934_06535 0e5d45e7716c4de0795decc2187e9f94 96 Pfam PF01909 Nucleotidyltransferase domain 27 88 2.1E-7 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 D934_06535 0e5d45e7716c4de0795decc2187e9f94 96 Gene3D G3DSA:3.30.460.10 4 96 3.8E-19 T 15-10-2018 D934_01645 0b24f96a772422fbccaa5a347a0b3ef7 471 SUPERFAMILY SSF51261 170 418 3.77E-69 T 15-10-2018 IPR011055 Duplicated hybrid motif D934_01645 0b24f96a772422fbccaa5a347a0b3ef7 471 Pfam PF04225 Opacity-associated protein A LysM-like domain 97 164 2.5E-7 T 15-10-2018 IPR007340 Opacity-associated protein A D934_01645 0b24f96a772422fbccaa5a347a0b3ef7 471 Gene3D G3DSA:3.10.450.350 88 178 3.8E-14 T 15-10-2018 D934_01645 0b24f96a772422fbccaa5a347a0b3ef7 471 Pfam PF01551 Peptidase family M23 320 416 8.8E-33 T 15-10-2018 IPR016047 Peptidase M23 D934_01645 0b24f96a772422fbccaa5a347a0b3ef7 471 Gene3D G3DSA:3.10.450.350 196 437 7.8E-86 T 15-10-2018 D934_01645 0b24f96a772422fbccaa5a347a0b3ef7 471 Gene3D G3DSA:2.70.70.10 293 422 7.8E-86 T 15-10-2018 IPR011055 Duplicated hybrid motif D934_13925 7fe2b7d8a19e167ceacdecbfa6f56915 347 SUPERFAMILY SSF52540 35 323 4.27E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_13925 7fe2b7d8a19e167ceacdecbfa6f56915 347 Pfam PF00437 Type II/IV secretion system protein 32 323 2.3E-50 T 15-10-2018 IPR001482 Type II/IV secretion system protein D934_13925 7fe2b7d8a19e167ceacdecbfa6f56915 347 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 38 332 1.9E-98 T 15-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 D934_13925 7fe2b7d8a19e167ceacdecbfa6f56915 347 Gene3D G3DSA:3.30.450.90 32 130 1.5E-31 T 15-10-2018 D934_13925 7fe2b7d8a19e167ceacdecbfa6f56915 347 Gene3D G3DSA:3.40.50.300 131 344 4.4E-52 T 15-10-2018 D934_11600 e4f12309a51bd3b3926974bf97268ea6 79 Pfam PF00550 Phosphopantetheine attachment site 7 73 3.7E-14 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain D934_11600 e4f12309a51bd3b3926974bf97268ea6 79 Gene3D G3DSA:1.10.1200.10 1 78 2.7E-27 T 15-10-2018 IPR036736 ACP-like superfamily D934_11600 e4f12309a51bd3b3926974bf97268ea6 79 SUPERFAMILY SSF47336 1 76 1.2E-20 T 15-10-2018 IPR036736 ACP-like superfamily D934_11600 e4f12309a51bd3b3926974bf97268ea6 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 4.0E-32 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 D934_11600 e4f12309a51bd3b3926974bf97268ea6 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 73 3.0E-12 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 D934_11600 e4f12309a51bd3b3926974bf97268ea6 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site D934_11600 e4f12309a51bd3b3926974bf97268ea6 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.103 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 D934_05845 29f708e4aff94b9e9e177bb537bb45d1 375 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 339 351 - T 15-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 D934_05845 29f708e4aff94b9e9e177bb537bb45d1 375 Gene3D G3DSA:3.40.50.1000 1 152 2.4E-34 T 15-10-2018 IPR023214 HAD superfamily D934_05845 29f708e4aff94b9e9e177bb537bb45d1 375 SUPERFAMILY SSF56784 1 149 6.72E-34 T 15-10-2018 IPR036412 HAD-like superfamily D934_05845 29f708e4aff94b9e9e177bb537bb45d1 375 SUPERFAMILY SSF54211 169 253 1.77E-32 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_05845 29f708e4aff94b9e9e177bb537bb45d1 375 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 164 3.2E-73 T 15-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 D934_05845 29f708e4aff94b9e9e177bb537bb45d1 375 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 357 4.0E-63 T 15-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 D934_05845 29f708e4aff94b9e9e177bb537bb45d1 375 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 146 3.5E-18 T 15-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 D934_05845 29f708e4aff94b9e9e177bb537bb45d1 375 Gene3D G3DSA:3.30.230.40 275 375 3.0E-36 T 15-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 D934_05845 29f708e4aff94b9e9e177bb537bb45d1 375 SUPERFAMILY SSF54211 276 361 3.16E-31 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_05845 29f708e4aff94b9e9e177bb537bb45d1 375 Gene3D G3DSA:3.30.230.40 156 256 6.3E-38 T 15-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 D934_05845 29f708e4aff94b9e9e177bb537bb45d1 375 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 15-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 D934_05845 29f708e4aff94b9e9e177bb537bb45d1 375 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 143 2.0E-34 T 15-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 D934_05845 29f708e4aff94b9e9e177bb537bb45d1 375 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 1 375 48.653 T 15-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 D934_05845 29f708e4aff94b9e9e177bb537bb45d1 375 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 375 36.423 T 15-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 D934_09805 22e6e2c108ec721c996693764d6fb90d 338 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 195 4.9E-9 T 15-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D934_09805 22e6e2c108ec721c996693764d6fb90d 338 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 253 333 1.0E-19 T 15-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D934_09805 22e6e2c108ec721c996693764d6fb90d 338 Gene3D G3DSA:3.40.47.10 1 198 2.2E-69 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_09805 22e6e2c108ec721c996693764d6fb90d 338 Gene3D G3DSA:3.40.47.10 199 338 1.4E-35 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_09805 22e6e2c108ec721c996693764d6fb90d 338 SUPERFAMILY SSF53901 41 338 6.47E-42 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_01745 54cad78ef190afc3e12326e584d45a1c 368 Gene3D G3DSA:3.30.70.1400 51 138 4.1E-84 T 15-10-2018 D934_01745 54cad78ef190afc3e12326e584d45a1c 368 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 4.3E-132 T 15-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 D934_01745 54cad78ef190afc3e12326e584d45a1c 368 Gene3D G3DSA:3.30.1360.120 7 236 4.1E-84 T 15-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 D934_01745 54cad78ef190afc3e12326e584d45a1c 368 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 259 2.5E-88 T 15-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain D934_01745 54cad78ef190afc3e12326e584d45a1c 368 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 44.611 T 15-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 D934_01745 54cad78ef190afc3e12326e584d45a1c 368 SUPERFAMILY SSF101790 274 362 1.34E-23 T 15-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal D934_01745 54cad78ef190afc3e12326e584d45a1c 368 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 267 353 7.0E-19 T 15-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 D934_01745 54cad78ef190afc3e12326e584d45a1c 368 SUPERFAMILY SSF103025 2 282 4.4E-92 T 15-10-2018 D934_01745 54cad78ef190afc3e12326e584d45a1c 368 PIRSF PIRSF006487 1 366 5.1E-88 T 15-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 D934_01745 54cad78ef190afc3e12326e584d45a1c 368 Gene3D G3DSA:2.40.30.110 282 367 3.8E-28 T 15-10-2018 D934_01745 54cad78ef190afc3e12326e584d45a1c 368 Gene3D G3DSA:4.10.1250.10 237 279 1.6E-20 T 15-10-2018 D934_08155 ecda520deec7fb906382c7b89a497df6 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 9.7E-52 T 15-10-2018 IPR017861 Kae1/TsaD family D934_08155 ecda520deec7fb906382c7b89a497df6 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 9.7E-52 T 15-10-2018 IPR017861 Kae1/TsaD family D934_08155 ecda520deec7fb906382c7b89a497df6 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 9.7E-52 T 15-10-2018 IPR017861 Kae1/TsaD family D934_08155 ecda520deec7fb906382c7b89a497df6 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 179 9.7E-52 T 15-10-2018 IPR017861 Kae1/TsaD family D934_08155 ecda520deec7fb906382c7b89a497df6 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 9.7E-52 T 15-10-2018 IPR017861 Kae1/TsaD family D934_08155 ecda520deec7fb906382c7b89a497df6 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 135 147 9.7E-52 T 15-10-2018 IPR017861 Kae1/TsaD family D934_08155 ecda520deec7fb906382c7b89a497df6 348 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 62.174 T 15-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 D934_08155 ecda520deec7fb906382c7b89a497df6 348 Pfam PF00814 Glycoprotease family 29 311 9.3E-99 T 15-10-2018 IPR000905 Gcp-like domain D934_08155 ecda520deec7fb906382c7b89a497df6 348 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 1.0E-128 T 15-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 D934_08155 ecda520deec7fb906382c7b89a497df6 348 SUPERFAMILY SSF53067 3 127 1.68E-29 T 15-10-2018 D934_08155 ecda520deec7fb906382c7b89a497df6 348 SUPERFAMILY SSF53067 105 313 1.72E-37 T 15-10-2018 D934_08155 ecda520deec7fb906382c7b89a497df6 348 Gene3D G3DSA:3.30.420.40 3 319 2.6E-122 T 15-10-2018 D934_08155 ecda520deec7fb906382c7b89a497df6 348 Gene3D G3DSA:3.30.420.40 133 297 2.6E-122 T 15-10-2018 D934_08155 ecda520deec7fb906382c7b89a497df6 348 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 310 7.8E-111 T 15-10-2018 IPR017861 Kae1/TsaD family D934_07895 68d2454d81e63555a441a475bad02233 71 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 23 63 7.3E-18 T 15-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system D934_08200 63631bacb12e9a7230a7e29b1fdc57b0 124 Pfam PF00816 H-NS histone family 13 115 2.1E-20 T 15-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 D934_08200 63631bacb12e9a7230a7e29b1fdc57b0 124 SUPERFAMILY SSF81273 80 122 6.67E-12 T 15-10-2018 D934_08200 63631bacb12e9a7230a7e29b1fdc57b0 124 Gene3D G3DSA:4.10.430.10 70 124 1.7E-16 T 15-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 D934_08200 63631bacb12e9a7230a7e29b1fdc57b0 124 SMART SM00528 74 121 9.2E-13 T 15-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 D934_06840 b51907c3d26d5dcf064aafafe30bfc48 109 SUPERFAMILY SSF56601 1 96 6.75E-20 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D934_06840 b51907c3d26d5dcf064aafafe30bfc48 109 Gene3D G3DSA:3.50.80.20 15 92 1.8E-15 T 15-10-2018 D934_06840 b51907c3d26d5dcf064aafafe30bfc48 109 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 2 96 3.3E-21 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_07230 5f7bbd4b8cc7b22d66d080305617e667 189 SUPERFAMILY SSF54523 8 183 4.45E-20 T 15-10-2018 D934_07230 5f7bbd4b8cc7b22d66d080305617e667 189 Pfam PF00114 Pilin (bacterial filament) 36 179 4.2E-22 T 15-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 D934_07230 5f7bbd4b8cc7b22d66d080305617e667 189 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 28 1.5E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_07230 5f7bbd4b8cc7b22d66d080305617e667 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 5.0E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_07230 5f7bbd4b8cc7b22d66d080305617e667 189 Gene3D G3DSA:3.30.700.10 8 180 1.8E-18 T 15-10-2018 D934_06760 7b11b9ebef6e58debc5532d0ba856344 381 Pfam PF04865 Baseplate J-like protein 73 228 3.4E-13 T 15-10-2018 IPR006949 Baseplate protein J-like D934_08650 7b11b9ebef6e58debc5532d0ba856344 381 Pfam PF04865 Baseplate J-like protein 73 228 3.4E-13 T 15-10-2018 IPR006949 Baseplate protein J-like D934_12315 7b11b9ebef6e58debc5532d0ba856344 381 Pfam PF04865 Baseplate J-like protein 73 228 3.4E-13 T 15-10-2018 IPR006949 Baseplate protein J-like D934_06085 e1d31cc3309e50c24b5acb0948411bfd 255 Pfam PF00106 short chain dehydrogenase 6 121 4.5E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_06085 e1d31cc3309e50c24b5acb0948411bfd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.3E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_06085 e1d31cc3309e50c24b5acb0948411bfd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 1.3E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_06085 e1d31cc3309e50c24b5acb0948411bfd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.3E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_06085 e1d31cc3309e50c24b5acb0948411bfd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 104 120 1.3E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_06085 e1d31cc3309e50c24b5acb0948411bfd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.3E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_06085 e1d31cc3309e50c24b5acb0948411bfd 255 Gene3D G3DSA:3.40.50.720 1 252 8.4E-46 T 15-10-2018 D934_06085 e1d31cc3309e50c24b5acb0948411bfd 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 151 250 6.7E-16 T 15-10-2018 D934_06085 e1d31cc3309e50c24b5acb0948411bfd 255 SUPERFAMILY SSF51735 5 253 1.07E-46 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_02345 24162cef267975b70f2b9b2b8eab433b 229 Gene3D G3DSA:1.20.120.1200 12 177 1.0E-39 T 15-10-2018 D934_02345 24162cef267975b70f2b9b2b8eab433b 229 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 29 175 3.9E-34 T 15-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02285 0b932c1c6be19561c78f689b52d61e0b 249 Gene3D G3DSA:3.20.20.70 1 249 1.0E-87 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_02285 0b932c1c6be19561c78f689b52d61e0b 249 SUPERFAMILY SSF51351 1 247 3.27E-83 T 15-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_02285 0b932c1c6be19561c78f689b52d61e0b 249 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 15-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_02285 0b932c1c6be19561c78f689b52d61e0b 249 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 247 56.062 T 15-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_02285 0b932c1c6be19561c78f689b52d61e0b 249 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 1.4E-58 T 15-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_02285 0b932c1c6be19561c78f689b52d61e0b 249 Pfam PF00121 Triosephosphate isomerase 4 244 3.2E-87 T 15-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_02985 60bdac77a6e3d454a1d7e1809753286f 624 Gene3D G3DSA:3.30.2400.10 399 588 1.2E-9 T 15-10-2018 D934_02985 60bdac77a6e3d454a1d7e1809753286f 624 Pfam PF05065 Phage capsid family 355 621 2.3E-50 T 15-10-2018 IPR024455 Phage capsid D934_02985 60bdac77a6e3d454a1d7e1809753286f 624 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 333 620 1.5E-30 T 15-10-2018 IPR024455 Phage capsid D934_02985 60bdac77a6e3d454a1d7e1809753286f 624 Gene3D G3DSA:3.30.2320.10 484 577 1.2E-9 T 15-10-2018 D934_02985 60bdac77a6e3d454a1d7e1809753286f 624 SUPERFAMILY SSF56563 352 621 2.48E-42 T 15-10-2018 D934_02985 60bdac77a6e3d454a1d7e1809753286f 624 Pfam PF04586 Caudovirus prohead serine protease 69 164 6.7E-6 T 15-10-2018 IPR006433 Prohead protease D934_05155 60bdac77a6e3d454a1d7e1809753286f 624 Gene3D G3DSA:3.30.2400.10 399 588 1.2E-9 T 15-10-2018 D934_05155 60bdac77a6e3d454a1d7e1809753286f 624 Pfam PF05065 Phage capsid family 355 621 2.3E-50 T 15-10-2018 IPR024455 Phage capsid D934_05155 60bdac77a6e3d454a1d7e1809753286f 624 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 333 620 1.5E-30 T 15-10-2018 IPR024455 Phage capsid D934_05155 60bdac77a6e3d454a1d7e1809753286f 624 Gene3D G3DSA:3.30.2320.10 484 577 1.2E-9 T 15-10-2018 D934_05155 60bdac77a6e3d454a1d7e1809753286f 624 SUPERFAMILY SSF56563 352 621 2.48E-42 T 15-10-2018 D934_05155 60bdac77a6e3d454a1d7e1809753286f 624 Pfam PF04586 Caudovirus prohead serine protease 69 164 6.7E-6 T 15-10-2018 IPR006433 Prohead protease D934_01605 7f9fbfd746a06eea62c4643c8b4162aa 271 SUPERFAMILY SSF54001 30 255 4.17E-39 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily D934_01605 7f9fbfd746a06eea62c4643c8b4162aa 271 Pfam PF00112 Papain family cysteine protease 48 251 2.9E-13 T 15-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 D934_01605 7f9fbfd746a06eea62c4643c8b4162aa 271 SMART SM00645 37 263 0.0011 T 15-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 D934_01605 7f9fbfd746a06eea62c4643c8b4162aa 271 Gene3D G3DSA:3.90.70.10 4 271 3.4E-128 T 15-10-2018 D934_09400 cfe270f68745d470b607a27fb0cebb0a 618 Pfam PF13667 ThiC-associated domain 39 112 3.8E-27 T 15-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D934_09400 cfe270f68745d470b607a27fb0cebb0a 618 Pfam PF01964 Radical SAM ThiC family 148 596 3.3E-198 T 15-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D934_09400 cfe270f68745d470b607a27fb0cebb0a 618 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 147 600 98.053 T 15-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D934_09400 cfe270f68745d470b607a27fb0cebb0a 618 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 147 599 6.5E-208 T 15-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D934_09400 cfe270f68745d470b607a27fb0cebb0a 618 Gene3D G3DSA:3.20.20.540 218 531 6.8E-152 T 15-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D934_13110 62ba6f4f8b59a3ad1e4aec8e0ac8dfe6 960 Gene3D G3DSA:3.30.830.10 741 935 9.9E-38 T 15-10-2018 D934_13110 62ba6f4f8b59a3ad1e4aec8e0ac8dfe6 960 Pfam PF05193 Peptidase M16 inactive domain 216 391 4.5E-30 T 15-10-2018 IPR007863 Peptidase M16, C-terminal D934_13110 62ba6f4f8b59a3ad1e4aec8e0ac8dfe6 960 Pfam PF05193 Peptidase M16 inactive domain 684 864 2.7E-29 T 15-10-2018 IPR007863 Peptidase M16, C-terminal D934_13110 62ba6f4f8b59a3ad1e4aec8e0ac8dfe6 960 Gene3D G3DSA:3.30.830.10 45 267 3.1E-65 T 15-10-2018 D934_13110 62ba6f4f8b59a3ad1e4aec8e0ac8dfe6 960 Gene3D G3DSA:3.30.830.10 271 469 9.5E-37 T 15-10-2018 D934_13110 62ba6f4f8b59a3ad1e4aec8e0ac8dfe6 960 Pfam PF00675 Insulinase (Peptidase family M16) 59 196 8.3E-15 T 15-10-2018 IPR011765 Peptidase M16, N-terminal D934_13110 62ba6f4f8b59a3ad1e4aec8e0ac8dfe6 960 Pfam PF00675 Insulinase (Peptidase family M16) 529 649 1.2E-8 T 15-10-2018 IPR011765 Peptidase M16, N-terminal D934_13110 62ba6f4f8b59a3ad1e4aec8e0ac8dfe6 960 SUPERFAMILY SSF63411 44 254 3.67E-53 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D934_13110 62ba6f4f8b59a3ad1e4aec8e0ac8dfe6 960 SUPERFAMILY SSF63411 274 457 1.28E-31 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D934_13110 62ba6f4f8b59a3ad1e4aec8e0ac8dfe6 960 SUPERFAMILY SSF63411 516 732 1.92E-41 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D934_13110 62ba6f4f8b59a3ad1e4aec8e0ac8dfe6 960 Gene3D G3DSA:3.30.830.10 519 731 3.4E-41 T 15-10-2018 D934_13110 62ba6f4f8b59a3ad1e4aec8e0ac8dfe6 960 SUPERFAMILY SSF63411 747 951 1.18E-32 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D934_01065 0436b5c1e2b3fb45d06c9a098237b3d6 134 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 133 3.2E-43 T 15-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L D934_01065 0436b5c1e2b3fb45d06c9a098237b3d6 134 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 1.9E-13 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 D934_01065 0436b5c1e2b3fb45d06c9a098237b3d6 134 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 1.9E-13 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 D934_01065 0436b5c1e2b3fb45d06c9a098237b3d6 134 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.9E-13 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 D934_01065 0436b5c1e2b3fb45d06c9a098237b3d6 134 Gene3D G3DSA:1.10.1200.120 3 134 1.2E-39 T 15-10-2018 IPR036019 Gated mechanosensitive channel D934_01065 0436b5c1e2b3fb45d06c9a098237b3d6 134 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 3.8E-41 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 D934_01065 0436b5c1e2b3fb45d06c9a098237b3d6 134 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 24.007 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 D934_01065 0436b5c1e2b3fb45d06c9a098237b3d6 134 SUPERFAMILY SSF81330 12 129 5.36E-35 T 15-10-2018 IPR036019 Gated mechanosensitive channel D934_01065 0436b5c1e2b3fb45d06c9a098237b3d6 134 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 15-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site D934_04705 51568d69c71aa9f0c0fff9c2d93b2706 240 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 235 5.8E-5 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal D934_04705 51568d69c71aa9f0c0fff9c2d93b2706 240 Pfam PF00005 ABC transporter 20 165 2.6E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_04705 51568d69c71aa9f0c0fff9c2d93b2706 240 SMART SM00382 26 212 1.2E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_04705 51568d69c71aa9f0c0fff9c2d93b2706 240 SUPERFAMILY SSF52540 2 236 6.04E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04705 51568d69c71aa9f0c0fff9c2d93b2706 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 2 240 1.2E-113 T 15-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 D934_04705 51568d69c71aa9f0c0fff9c2d93b2706 240 Gene3D G3DSA:3.40.50.300 1 240 7.5E-69 T 15-10-2018 D934_03420 f684bd68440f42381be9d29067ffeab7 118 Gene3D G3DSA:4.10.910.10 72 118 4.9E-24 T 15-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03420 f684bd68440f42381be9d29067ffeab7 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 15-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03420 f684bd68440f42381be9d29067ffeab7 118 PIRSF PIRSF002134 1 118 7.8E-39 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03420 f684bd68440f42381be9d29067ffeab7 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.231 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03420 f684bd68440f42381be9d29067ffeab7 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.9E-48 T 15-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03420 f684bd68440f42381be9d29067ffeab7 118 SUPERFAMILY SSF46946 2 114 5.55E-41 T 15-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 D934_03420 f684bd68440f42381be9d29067ffeab7 118 Pfam PF00416 Ribosomal protein S13/S18 62 108 3.3E-16 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03420 f684bd68440f42381be9d29067ffeab7 118 Gene3D G3DSA:1.10.8.50 1 71 2.1E-25 T 15-10-2018 D934_11065 814f7c6ef66a16a91cb34c6f0d7ce864 484 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 33 484 6.8E-158 T 15-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 D934_11065 814f7c6ef66a16a91cb34c6f0d7ce864 484 Pfam PF02397 Bacterial sugar transferase 293 478 2.1E-64 T 15-10-2018 IPR003362 Bacterial sugar transferase D934_11065 814f7c6ef66a16a91cb34c6f0d7ce864 484 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 33 484 1.2E-140 T 15-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase D934_11065 814f7c6ef66a16a91cb34c6f0d7ce864 484 Pfam PF13727 CoA-binding domain 77 255 9.9E-30 T 15-10-2018 D934_11065 814f7c6ef66a16a91cb34c6f0d7ce864 484 Gene3D G3DSA:3.40.50.720 155 278 7.6E-13 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 293 318 2.6E-70 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 266 2.6E-70 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 534 549 2.6E-70 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 123 145 2.6E-70 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 469 490 2.6E-70 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 171 2.6E-70 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 386 400 2.6E-70 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 436 2.6E-70 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 556 576 2.6E-70 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 Gene3D G3DSA:3.30.390.30 472 593 3.7E-42 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D934_12885 536315aab5b4962be20c68829943b092 603 Gene3D G3DSA:3.50.50.60 124 454 4.2E-119 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_12885 536315aab5b4962be20c68829943b092 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 311 6.1E-39 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 124 143 6.1E-39 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 272 6.1E-39 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 414 436 6.1E-39 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 385 401 6.1E-39 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 473 580 4.8E-34 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 D934_12885 536315aab5b4962be20c68829943b092 603 SUPERFAMILY SSF55424 471 592 7.04E-38 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D934_12885 536315aab5b4962be20c68829943b092 603 SUPERFAMILY SSF51905 119 458 6.82E-63 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_12885 536315aab5b4962be20c68829943b092 603 Gene3D G3DSA:3.50.50.60 269 395 4.2E-119 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_12885 536315aab5b4962be20c68829943b092 603 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D934_12885 536315aab5b4962be20c68829943b092 603 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 123 585 1.9E-153 T 15-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 D934_12885 536315aab5b4962be20c68829943b092 603 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 123 449 6.5E-69 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D934_12885 536315aab5b4962be20c68829943b092 603 Gene3D G3DSA:2.40.50.100 2 81 6.8E-18 T 15-10-2018 D934_12885 536315aab5b4962be20c68829943b092 603 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 157 167 - T 15-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 D934_12885 536315aab5b4962be20c68829943b092 603 SUPERFAMILY SSF51230 2 92 8.38E-21 T 15-10-2018 IPR011053 Single hybrid motif D934_12885 536315aab5b4962be20c68829943b092 603 PIRSF PIRSF000350 61 594 1.3E-86 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 D934_12885 536315aab5b4962be20c68829943b092 603 Pfam PF00364 Biotin-requiring enzyme 5 75 4.0E-19 T 15-10-2018 IPR000089 Biotin/lipoyl attachment D934_13335 c591924f9721cd6cf30c8b37f84c2a4e 540 SMART SM00646 352 507 3.7E-67 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 D934_13335 c591924f9721cd6cf30c8b37f84c2a4e 540 Gene3D G3DSA:2.60.40.3500 32 137 1.4E-16 T 15-10-2018 D934_13335 c591924f9721cd6cf30c8b37f84c2a4e 540 Gene3D G3DSA:3.40.630.40 279 515 7.0E-74 T 15-10-2018 D934_13335 c591924f9721cd6cf30c8b37f84c2a4e 540 SUPERFAMILY SSF53187 290 510 1.38E-51 T 15-10-2018 D934_13335 c591924f9721cd6cf30c8b37f84c2a4e 540 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 292 507 5.9E-47 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 D934_13335 c591924f9721cd6cf30c8b37f84c2a4e 540 Pfam PF11741 AMIN domain 41 121 1.3E-12 T 15-10-2018 IPR021731 AMIN domain D934_12530 d15255f7e375acd494b1e2d2e411145f 295 Gene3D G3DSA:3.60.21.10 1 270 9.3E-67 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like D934_12530 d15255f7e375acd494b1e2d2e411145f 295 PIRSF PIRSF000903 1 275 6.2E-114 T 15-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 D934_12530 d15255f7e375acd494b1e2d2e411145f 295 SUPERFAMILY SSF56300 1 272 8.36E-48 T 15-10-2018 D934_12530 d15255f7e375acd494b1e2d2e411145f 295 Pfam PF00149 Calcineurin-like phosphoesterase 1 144 6.3E-14 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D934_12530 d15255f7e375acd494b1e2d2e411145f 295 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 259 1.7E-78 T 15-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 D934_08115 12457a85894760a84ada15da1ddc74f7 158 SUPERFAMILY SSF53335 2 153 4.85E-34 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_08115 12457a85894760a84ada15da1ddc74f7 158 Gene3D G3DSA:3.40.50.150 1 154 1.2E-33 T 15-10-2018 D934_08115 12457a85894760a84ada15da1ddc74f7 158 Pfam PF01555 DNA methylase 73 148 1.2E-18 T 15-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 D934_08115 12457a85894760a84ada15da1ddc74f7 158 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 93 110 2.2E-6 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 D934_08115 12457a85894760a84ada15da1ddc74f7 158 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 133 153 2.2E-6 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 D934_02440 11f0f054a033aed0fa3d926da41c0ac5 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 67 2.7E-15 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D934_02440 11f0f054a033aed0fa3d926da41c0ac5 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 8 161 4.8E-55 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D934_02440 11f0f054a033aed0fa3d926da41c0ac5 162 Gene3D G3DSA:3.40.50.620 1 162 2.1E-53 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_02440 11f0f054a033aed0fa3d926da41c0ac5 162 Pfam PF01467 Cytidylyltransferase-like 10 138 2.8E-21 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D934_02440 11f0f054a033aed0fa3d926da41c0ac5 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 4.4E-47 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D934_02440 11f0f054a033aed0fa3d926da41c0ac5 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 4.4E-47 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D934_02440 11f0f054a033aed0fa3d926da41c0ac5 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 4.4E-47 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D934_02440 11f0f054a033aed0fa3d926da41c0ac5 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 4.4E-47 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D934_02440 11f0f054a033aed0fa3d926da41c0ac5 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 4.4E-47 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D934_02440 11f0f054a033aed0fa3d926da41c0ac5 162 SUPERFAMILY SSF52374 6 160 1.93E-42 T 15-10-2018 D934_02440 11f0f054a033aed0fa3d926da41c0ac5 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 162 32.74 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D934_10065 bce4562edafcb2b98a2c0294bbeaebe1 64 SUPERFAMILY SSF53041 1 64 1.23E-13 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 D934_10065 bce4562edafcb2b98a2c0294bbeaebe1 64 Pfam PF00239 Resolvase, N terminal domain 3 64 8.5E-13 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D934_10065 bce4562edafcb2b98a2c0294bbeaebe1 64 Gene3D G3DSA:3.40.50.1390 1 64 6.2E-13 T 15-10-2018 D934_03195 874e99cdc449a8233ddb5c183efa1195 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 183 2.7E-47 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 D934_03195 874e99cdc449a8233ddb5c183efa1195 189 SUPERFAMILY SSF52972 1 184 2.88E-53 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D934_03195 874e99cdc449a8233ddb5c183efa1195 189 Hamap MF_00528 Septum formation protein Maf [maf]. 1 189 28.973 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 D934_03195 874e99cdc449a8233ddb5c183efa1195 189 Gene3D G3DSA:3.90.950.10 1 189 2.0E-58 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D934_03195 874e99cdc449a8233ddb5c183efa1195 189 Pfam PF02545 Maf-like protein 2 185 7.1E-49 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 D934_03195 874e99cdc449a8233ddb5c183efa1195 189 PIRSF PIRSF006305 1 189 2.5E-45 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 D934_12900 bf8acbd71c10ba3a06dabaae11db184f 400 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 14 389 5.5E-175 T 15-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 D934_12900 bf8acbd71c10ba3a06dabaae11db184f 400 SUPERFAMILY SSF53383 18 389 8.97E-116 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D934_12900 bf8acbd71c10ba3a06dabaae11db184f 400 Gene3D G3DSA:3.90.1150.10 256 393 1.2E-52 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D934_12900 bf8acbd71c10ba3a06dabaae11db184f 400 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 388 1.4E-134 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D934_12900 bf8acbd71c10ba3a06dabaae11db184f 400 Gene3D G3DSA:3.40.640.10 10 255 1.0E-81 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D934_12900 bf8acbd71c10ba3a06dabaae11db184f 400 PIRSF PIRSF001434 4 392 3.5E-135 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D934_12900 bf8acbd71c10ba3a06dabaae11db184f 400 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D934_09910 c19c58867214f311cf93d34169f311ae 126 Gene3D G3DSA:1.10.260.40 3 68 3.4E-16 T 15-10-2018 D934_09910 c19c58867214f311cf93d34169f311ae 126 Pfam PF01381 Helix-turn-helix 10 65 1.4E-11 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_09910 c19c58867214f311cf93d34169f311ae 126 SMART SM00530 9 65 4.8E-10 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_09910 c19c58867214f311cf93d34169f311ae 126 SUPERFAMILY SSF47413 4 68 7.42E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_00785 d115ea8afa54db8c08c14cbee2ea5466 83 SUPERFAMILY SSF47598 10 50 5.06E-8 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 D934_08705 485b4ecdedfa6124404d80e91da6e77b 173 Pfam PF02600 Disulfide bond formation protein DsbB 9 160 1.4E-37 T 15-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 D934_08705 485b4ecdedfa6124404d80e91da6e77b 173 Gene3D G3DSA:1.20.1550.10 4 173 4.9E-45 T 15-10-2018 IPR023380 DsbB-like superfamily D934_08705 485b4ecdedfa6124404d80e91da6e77b 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 4 168 21.201 T 15-10-2018 IPR022920 Disulphide bond formation protein DsbB D934_08705 485b4ecdedfa6124404d80e91da6e77b 173 SUPERFAMILY SSF158442 13 160 1.96E-38 T 15-10-2018 IPR023380 DsbB-like superfamily D934_06440 b2a1198fc4efc7701a88f098daba9db9 360 SUPERFAMILY SSF69279 7 186 1.08E-12 T 15-10-2018 D934_06440 b2a1198fc4efc7701a88f098daba9db9 360 Pfam PF05954 Phage late control gene D protein (GPD) 36 320 4.4E-30 T 15-10-2018 D934_13240 e6143751faeeaa663fc069740c015f57 597 SUPERFAMILY SSF52266 31 297 4.03E-15 T 15-10-2018 D934_13240 e6143751faeeaa663fc069740c015f57 597 SMART SM00869 332 589 2.2E-25 T 15-10-2018 IPR005546 Autotransporter beta-domain D934_13240 e6143751faeeaa663fc069740c015f57 597 SUPERFAMILY SSF103515 328 594 3.66E-27 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily D934_13240 e6143751faeeaa663fc069740c015f57 597 Gene3D G3DSA:3.40.50.1110 18 302 1.2E-72 T 15-10-2018 IPR036514 SGNH hydrolase superfamily D934_13240 e6143751faeeaa663fc069740c015f57 597 PIRSF PIRSF037375 1 597 9.4E-196 T 15-10-2018 IPR017186 Lipase, autotransporter EstA D934_13240 e6143751faeeaa663fc069740c015f57 597 Pfam PF03797 Autotransporter beta-domain 339 570 1.5E-35 T 15-10-2018 IPR005546 Autotransporter beta-domain D934_13240 e6143751faeeaa663fc069740c015f57 597 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 32 290 4.7E-11 T 15-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 D934_13240 e6143751faeeaa663fc069740c015f57 597 Gene3D G3DSA:2.40.128.130 312 597 1.7E-40 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily D934_10635 94fc9134c5ee43fe18aedf6a9907f714 253 Pfam PF01209 ubiE/COQ5 methyltransferase family 21 252 6.2E-90 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 D934_10635 94fc9134c5ee43fe18aedf6a9907f714 253 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 38 53 - T 15-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 D934_10635 94fc9134c5ee43fe18aedf6a9907f714 253 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 18 252 37.073 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 D934_10635 94fc9134c5ee43fe18aedf6a9907f714 253 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 160 174 - T 15-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 D934_10635 94fc9134c5ee43fe18aedf6a9907f714 253 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 27 252 5.5E-81 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 D934_10635 94fc9134c5ee43fe18aedf6a9907f714 253 Gene3D G3DSA:3.40.50.150 33 253 1.1E-70 T 15-10-2018 D934_10635 94fc9134c5ee43fe18aedf6a9907f714 253 SUPERFAMILY SSF53335 22 249 1.7E-43 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_00625 234186733f46ac4b7f2bc0a12a6f120c 219 Pfam PF01810 LysE type translocator 33 213 2.4E-33 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D934_00625 234186733f46ac4b7f2bc0a12a6f120c 219 PIRSF PIRSF006324 22 218 6.5E-44 T 15-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D934_08980 16efc4bcd6dd1ac717b01d906fc4f5f3 489 Pfam PF05272 Virulence-associated protein E 136 335 7.7E-82 T 15-10-2018 IPR007936 Virulence-associated E D934_07760 16efc4bcd6dd1ac717b01d906fc4f5f3 489 Pfam PF05272 Virulence-associated protein E 136 335 7.7E-82 T 15-10-2018 IPR007936 Virulence-associated E D934_12925 68f0b816347821bebaa3a6b3b28ff5a6 225 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 17 225 34.146 T 15-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 D934_12925 68f0b816347821bebaa3a6b3b28ff5a6 225 Gene3D G3DSA:3.40.50.150 10 223 1.7E-67 T 15-10-2018 D934_12925 68f0b816347821bebaa3a6b3b28ff5a6 225 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 23 219 2.7E-52 T 15-10-2018 D934_12925 68f0b816347821bebaa3a6b3b28ff5a6 225 SUPERFAMILY SSF53335 19 219 2.89E-40 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_12925 68f0b816347821bebaa3a6b3b28ff5a6 225 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 145 160 - T 15-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 D934_12925 68f0b816347821bebaa3a6b3b28ff5a6 225 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 18 220 7.3E-57 T 15-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 D934_12020 7c07cbdbdbaf93dd3a9693863d040780 71 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 67 19.949 T 15-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 D934_12020 7c07cbdbdbaf93dd3a9693863d040780 71 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 2.5E-21 T 15-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 D934_12020 7c07cbdbdbaf93dd3a9693863d040780 71 Pfam PF02416 mttA/Hcf106 family 5 48 1.9E-14 T 15-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 D934_11510 0455b3257ea30cbf21d8682b7720134f 370 SUPERFAMILY SSF53474 14 369 8.75E-85 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_11510 0455b3257ea30cbf21d8682b7720134f 370 Gene3D G3DSA:3.40.50.1820 21 362 1.5E-123 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_11510 0455b3257ea30cbf21d8682b7720134f 370 PIRSF PIRSF000443 1 370 5.1E-129 T 15-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 D934_11510 0455b3257ea30cbf21d8682b7720134f 370 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 16 367 1.1E-108 T 15-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 D934_11510 0455b3257ea30cbf21d8682b7720134f 370 Gene3D G3DSA:1.10.1740.110 179 285 1.5E-123 T 15-10-2018 D934_11510 0455b3257ea30cbf21d8682b7720134f 370 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 11 368 28.817 T 15-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 D934_11510 0455b3257ea30cbf21d8682b7720134f 370 Pfam PF00561 alpha/beta hydrolase fold 45 354 3.3E-27 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D934_08445 b3100ba1f59f956359225b130e4963ad 213 Pfam PF02498 BRO family, N-terminal domain 17 112 2.5E-7 T 15-10-2018 IPR003497 BRO N-terminal domain D934_08445 b3100ba1f59f956359225b130e4963ad 213 SMART SM01040 14 111 1.3E-19 T 15-10-2018 IPR003497 BRO N-terminal domain D934_02820 b77f88eaceda341cb2fdb90f73b24bba 305 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 220 279 8.7E-5 T 15-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 D934_02820 b77f88eaceda341cb2fdb90f73b24bba 305 SUPERFAMILY SSF103025 27 236 7.85E-45 T 15-10-2018 D934_02820 b77f88eaceda341cb2fdb90f73b24bba 305 Pfam PF01571 Aminomethyltransferase folate-binding domain 33 124 1.1E-4 T 15-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain D934_02820 b77f88eaceda341cb2fdb90f73b24bba 305 Gene3D G3DSA:2.40.30.160 190 290 1.0E-21 T 15-10-2018 D934_02820 b77f88eaceda341cb2fdb90f73b24bba 305 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 244 1.9E-21 T 15-10-2018 IPR017703 YgfZ/GcvT conserved site D934_02820 b77f88eaceda341cb2fdb90f73b24bba 305 Gene3D G3DSA:3.30.70.1400 37 123 2.7E-17 T 15-10-2018 D934_06330 3cbdc7da1cfca4801eac0cfe193dfba4 650 Pfam PF05876 Phage terminase large subunit (GpA) 44 596 1.2E-167 T 15-10-2018 IPR008866 Bacteriophage lambda, GpA D934_06330 3cbdc7da1cfca4801eac0cfe193dfba4 650 Gene3D G3DSA:3.40.50.300 19 236 9.6E-12 T 15-10-2018 D934_08030 87e31b46a94eba9e7673c1dc06850ff6 433 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_08030 87e31b46a94eba9e7673c1dc06850ff6 433 Pfam PF00005 ABC transporter 33 168 3.0E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_08030 87e31b46a94eba9e7673c1dc06850ff6 433 SUPERFAMILY SSF52540 12 243 2.9E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08030 87e31b46a94eba9e7673c1dc06850ff6 433 Pfam PF09821 C-terminal AAA-associated domain 304 421 3.3E-42 T 15-10-2018 IPR018632 C-terminal AAA-associated domain D934_08030 87e31b46a94eba9e7673c1dc06850ff6 433 SMART SM00382 42 220 7.9E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_08030 87e31b46a94eba9e7673c1dc06850ff6 433 Gene3D G3DSA:3.40.50.300 10 245 2.5E-57 T 15-10-2018 D934_05210 fff993d390ed1d6e62e2484e1f5f0543 197 Pfam PF02498 BRO family, N-terminal domain 17 103 2.5E-6 T 15-10-2018 IPR003497 BRO N-terminal domain D934_05210 fff993d390ed1d6e62e2484e1f5f0543 197 SMART SM01040 14 106 8.4E-13 T 15-10-2018 IPR003497 BRO N-terminal domain D934_10570 53fa9d46a4e2053c3c0d7e0d26f10175 327 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 29 327 55.022 T 15-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D934_10570 53fa9d46a4e2053c3c0d7e0d26f10175 327 PIRSF PIRSF002936 24 327 1.5E-146 T 15-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D934_10570 53fa9d46a4e2053c3c0d7e0d26f10175 327 SUPERFAMILY SSF52402 29 235 4.19E-68 T 15-10-2018 D934_10570 53fa9d46a4e2053c3c0d7e0d26f10175 327 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 54 282 3.3E-58 T 15-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 D934_10570 53fa9d46a4e2053c3c0d7e0d26f10175 327 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 34 327 2.2E-149 T 15-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D934_10570 53fa9d46a4e2053c3c0d7e0d26f10175 327 Gene3D G3DSA:3.40.50.620 32 237 4.8E-59 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_10755 fdd86b6f24242c913413ace11cfa97c7 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 25 93 3.6E-16 T 15-10-2018 IPR007711 Toxin HigB-1 D934_10755 fdd86b6f24242c913413ace11cfa97c7 93 SUPERFAMILY SSF143011 5 93 4.71E-11 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D934_10755 fdd86b6f24242c913413ace11cfa97c7 93 Gene3D G3DSA:3.30.2310.20 1 93 3.5E-17 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D934_13625 4d1d5c61d801402c48fc67635ef67e3f 351 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 336 48.982 T 15-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 D934_13625 4d1d5c61d801402c48fc67635ef67e3f 351 PIRSF PIRSF000164 16 346 6.1E-95 T 15-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 D934_13625 4d1d5c61d801402c48fc67635ef67e3f 351 Pfam PF01180 Dihydroorotate dehydrogenase 45 339 9.9E-89 T 15-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 D934_13625 4d1d5c61d801402c48fc67635ef67e3f 351 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 342 2.5E-125 T 15-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 D934_13625 4d1d5c61d801402c48fc67635ef67e3f 351 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 15-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 D934_13625 4d1d5c61d801402c48fc67635ef67e3f 351 SUPERFAMILY SSF51395 1 342 7.94E-102 T 15-10-2018 D934_13625 4d1d5c61d801402c48fc67635ef67e3f 351 Gene3D G3DSA:3.20.20.70 1 336 8.9E-128 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_03300 2d3aad5f6158033983c83c2fc9291582 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 1.2E-36 T 15-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 D934_03300 2d3aad5f6158033983c83c2fc9291582 156 Gene3D G3DSA:1.20.5.620 62 122 1.6E-10 T 15-10-2018 D934_03300 2d3aad5f6158033983c83c2fc9291582 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.507 T 15-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 D934_03300 2d3aad5f6158033983c83c2fc9291582 156 SUPERFAMILY SSF81573 62 121 5.23E-10 T 15-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily D934_03300 2d3aad5f6158033983c83c2fc9291582 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 3.0E-28 T 15-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 D934_09415 2dd15f351b7bc4540477f3d34ca9319f 510 SUPERFAMILY SSF103473 239 506 1.16E-8 T 15-10-2018 IPR036259 MFS transporter superfamily D934_09415 2dd15f351b7bc4540477f3d34ca9319f 510 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 25 506 2.4E-105 T 15-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 D934_09415 2dd15f351b7bc4540477f3d34ca9319f 510 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 164 176 - T 15-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 D934_09415 2dd15f351b7bc4540477f3d34ca9319f 510 Pfam PF00854 POT family 103 467 3.4E-65 T 15-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 D934_09415 2dd15f351b7bc4540477f3d34ca9319f 510 SUPERFAMILY SSF103473 18 310 1.7E-19 T 15-10-2018 IPR036259 MFS transporter superfamily D934_09415 2dd15f351b7bc4540477f3d34ca9319f 510 Gene3D G3DSA:1.20.1250.20 18 510 3.3E-120 T 15-10-2018 D934_02370 b89fea7ce2e5896e6af57afd97348401 246 Gene3D G3DSA:3.40.50.720 1 246 1.7E-73 T 15-10-2018 D934_02370 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.8E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_02370 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.8E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_02370 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.8E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_02370 b89fea7ce2e5896e6af57afd97348401 246 SUPERFAMILY SSF51735 4 244 3.41E-69 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_02370 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.0E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_02370 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.0E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_02370 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.0E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_02370 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.0E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_02370 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.0E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_02370 b89fea7ce2e5896e6af57afd97348401 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.0E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_02370 b89fea7ce2e5896e6af57afd97348401 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D934_02370 b89fea7ce2e5896e6af57afd97348401 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 243 2.0E-54 T 15-10-2018 D934_02370 b89fea7ce2e5896e6af57afd97348401 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 3.5E-98 T 15-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 D934_08070 102e72a4c34682bb8962cf6167824fc7 264 SUPERFAMILY SSF52540 6 234 1.47E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08070 102e72a4c34682bb8962cf6167824fc7 264 SMART SM00382 32 247 2.3E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_08070 102e72a4c34682bb8962cf6167824fc7 264 Pfam PF00005 ABC transporter 23 170 1.5E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_08070 102e72a4c34682bb8962cf6167824fc7 264 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_08070 102e72a4c34682bb8962cf6167824fc7 264 Gene3D G3DSA:3.40.50.300 7 243 2.6E-58 T 15-10-2018 D934_04985 fb5b81a2a92bf89f123e382b8da0b245 109 Pfam PF00355 Rieske [2Fe-2S] domain 4 95 4.0E-17 T 15-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 D934_04985 fb5b81a2a92bf89f123e382b8da0b245 109 SUPERFAMILY SSF50022 4 106 3.93E-26 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 D934_04985 fb5b81a2a92bf89f123e382b8da0b245 109 Gene3D G3DSA:2.102.10.10 1 109 2.6E-30 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 D934_09405 a11fdc1bce5a4d3d676bef281f6ca8b9 259 Gene3D G3DSA:3.40.50.80 101 255 2.2E-42 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D934_09405 a11fdc1bce5a4d3d676bef281f6ca8b9 259 Pfam PF00970 Oxidoreductase FAD-binding domain 21 98 5.9E-7 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 D934_09405 a11fdc1bce5a4d3d676bef281f6ca8b9 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 229 8.4E-10 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D934_09405 a11fdc1bce5a4d3d676bef281f6ca8b9 259 SUPERFAMILY SSF52343 104 257 7.99E-40 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D934_09405 a11fdc1bce5a4d3d676bef281f6ca8b9 259 SUPERFAMILY SSF63380 7 100 6.35E-24 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D934_09405 a11fdc1bce5a4d3d676bef281f6ca8b9 259 Gene3D G3DSA:2.40.30.10 1 97 6.7E-28 T 15-10-2018 D934_03430 09ad3b39a141f9bccaa1db623d9d4734 208 Gene3D G3DSA:1.10.1050.10 6 208 2.1E-77 T 15-10-2018 D934_03430 09ad3b39a141f9bccaa1db623d9d4734 208 SUPERFAMILY SSF55174 2 208 2.22E-65 T 15-10-2018 D934_03430 09ad3b39a141f9bccaa1db623d9d4734 208 Pfam PF01479 S4 domain 98 144 1.3E-19 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03430 09ad3b39a141f9bccaa1db623d9d4734 208 SMART SM00363 97 155 1.2E-18 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03430 09ad3b39a141f9bccaa1db623d9d4734 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 7.3E-31 T 15-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 D934_03430 09ad3b39a141f9bccaa1db623d9d4734 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 6.8E-76 T 15-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 D934_03430 09ad3b39a141f9bccaa1db623d9d4734 208 SMART SM01390 3 96 7.0E-46 T 15-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 D934_03430 09ad3b39a141f9bccaa1db623d9d4734 208 Gene3D G3DSA:3.10.290.10 96 193 2.1E-77 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D934_03430 09ad3b39a141f9bccaa1db623d9d4734 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 15-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03430 09ad3b39a141f9bccaa1db623d9d4734 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 34.996 T 15-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 D934_01360 9b5565057ded6c961903d24c004a5594 86 Pfam PF00886 Ribosomal protein S16 8 68 7.7E-24 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_01360 9b5565057ded6c961903d24c004a5594 86 Gene3D G3DSA:3.30.1320.10 1 86 1.1E-30 T 15-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_01360 9b5565057ded6c961903d24c004a5594 86 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 15-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_01360 9b5565057ded6c961903d24c004a5594 86 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 3.0E-33 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_01360 9b5565057ded6c961903d24c004a5594 86 SUPERFAMILY SSF54565 1 79 1.15E-29 T 15-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_01360 9b5565057ded6c961903d24c004a5594 86 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.926 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_10405 af85af869d726ea592b70f01efa541ee 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-18 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D934_10405 af85af869d726ea592b70f01efa541ee 311 Gene3D G3DSA:3.40.190.10 161 263 5.2E-67 T 15-10-2018 D934_10405 af85af869d726ea592b70f01efa541ee 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.0E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D934_10405 af85af869d726ea592b70f01efa541ee 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.0E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D934_10405 af85af869d726ea592b70f01efa541ee 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.0E-7 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D934_10405 af85af869d726ea592b70f01efa541ee 311 Pfam PF03466 LysR substrate binding domain 87 293 4.5E-48 T 15-10-2018 IPR005119 LysR, substrate-binding D934_10405 af85af869d726ea592b70f01efa541ee 311 SUPERFAMILY SSF53850 88 296 7.36E-43 T 15-10-2018 D934_10405 af85af869d726ea592b70f01efa541ee 311 Gene3D G3DSA:3.40.190.10 91 290 5.2E-67 T 15-10-2018 D934_10405 af85af869d726ea592b70f01efa541ee 311 SUPERFAMILY SSF46785 1 110 3.24E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_10405 af85af869d726ea592b70f01efa541ee 311 Gene3D G3DSA:1.10.10.10 1 85 4.8E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_00050 aed7e93234513058fe5c42664419a481 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 15-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 D934_00050 aed7e93234513058fe5c42664419a481 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 326 1.3E-106 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 D934_00050 aed7e93234513058fe5c42664419a481 335 SUPERFAMILY SSF53659 1 335 5.95E-123 T 15-10-2018 D934_00050 aed7e93234513058fe5c42664419a481 335 Gene3D G3DSA:3.40.718.10 1 335 9.6E-141 T 15-10-2018 D934_00050 aed7e93234513058fe5c42664419a481 335 SMART SM01329 4 331 3.8E-179 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 D934_13070 59574f8f0d20079b9bdd9788f72b9861 334 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 211 221 - T 15-10-2018 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13070 59574f8f0d20079b9bdd9788f72b9861 334 Pfam PF00274 Fructose-bisphosphate aldolase class-I 6 333 3.2E-136 T 15-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13070 59574f8f0d20079b9bdd9788f72b9861 334 SUPERFAMILY SSF51569 4 333 4.92E-131 T 15-10-2018 D934_13070 59574f8f0d20079b9bdd9788f72b9861 334 Gene3D G3DSA:3.20.20.70 2 334 4.6E-149 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_05810 e08592ec9c2b3a27979a7b90edc2d7e8 218 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 208 1.8E-37 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal D934_05810 e08592ec9c2b3a27979a7b90edc2d7e8 218 SMART SM01007 21 209 7.5E-47 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal D934_05810 e08592ec9c2b3a27979a7b90edc2d7e8 218 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 24 213 3.9E-69 T 15-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 D934_05810 e08592ec9c2b3a27979a7b90edc2d7e8 218 SUPERFAMILY SSF53639 17 214 4.71E-43 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily D934_05810 e08592ec9c2b3a27979a7b90edc2d7e8 218 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 217 101.605 T 15-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 D934_05810 e08592ec9c2b3a27979a7b90edc2d7e8 218 Gene3D G3DSA:3.40.225.10 13 215 6.4E-44 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily D934_11920 3748fda8e557a44ffb277e76f12fe417 368 Gene3D G3DSA:3.30.200.20 35 126 1.9E-17 T 15-10-2018 D934_11920 3748fda8e557a44ffb277e76f12fe417 368 Pfam PF01636 Phosphotransferase enzyme family 58 277 1.2E-26 T 15-10-2018 IPR002575 Aminoglycoside phosphotransferase D934_11920 3748fda8e557a44ffb277e76f12fe417 368 Gene3D G3DSA:3.90.1200.10 127 365 1.8E-62 T 15-10-2018 D934_11920 3748fda8e557a44ffb277e76f12fe417 368 SUPERFAMILY SSF56112 45 337 1.36E-43 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily D934_01125 da786bbed47f7ac6d8a3eaa1d31f6210 397 Pfam PF00042 Globin 10 105 2.0E-7 T 15-10-2018 IPR000971 Globin GO:0020037 D934_01125 da786bbed47f7ac6d8a3eaa1d31f6210 397 PRINTS PR00409 Phthalate dioxygenase reductase family signature 266 285 6.2E-11 T 15-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 D934_01125 da786bbed47f7ac6d8a3eaa1d31f6210 397 PRINTS PR00409 Phthalate dioxygenase reductase family signature 229 243 6.2E-11 T 15-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 D934_01125 da786bbed47f7ac6d8a3eaa1d31f6210 397 PRINTS PR00409 Phthalate dioxygenase reductase family signature 181 191 6.2E-11 T 15-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 D934_01125 da786bbed47f7ac6d8a3eaa1d31f6210 397 Gene3D G3DSA:3.40.50.80 260 394 4.2E-30 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D934_01125 da786bbed47f7ac6d8a3eaa1d31f6210 397 Gene3D G3DSA:2.40.30.10 154 256 8.2E-29 T 15-10-2018 D934_01125 da786bbed47f7ac6d8a3eaa1d31f6210 397 Pfam PF00970 Oxidoreductase FAD-binding domain 161 255 8.0E-5 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 D934_01125 da786bbed47f7ac6d8a3eaa1d31f6210 397 Pfam PF00175 Oxidoreductase NAD-binding domain 267 368 5.6E-16 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D934_01125 da786bbed47f7ac6d8a3eaa1d31f6210 397 SUPERFAMILY SSF63380 152 256 8.0E-25 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D934_01125 da786bbed47f7ac6d8a3eaa1d31f6210 397 SUPERFAMILY SSF46458 5 139 1.35E-34 T 15-10-2018 IPR009050 Globin-like superfamily D934_01125 da786bbed47f7ac6d8a3eaa1d31f6210 397 SUPERFAMILY SSF52343 262 391 1.06E-32 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D934_01125 da786bbed47f7ac6d8a3eaa1d31f6210 397 Gene3D G3DSA:1.10.490.10 5 145 5.3E-47 T 15-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 D934_01565 369ee7dbd27ded01524a0b9d7937aa71 242 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 191 196 - T 15-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site D934_01565 369ee7dbd27ded01524a0b9d7937aa71 242 Gene3D G3DSA:3.40.140.10 119 242 5.0E-40 T 15-10-2018 D934_01565 369ee7dbd27ded01524a0b9d7937aa71 242 SUPERFAMILY SSF47781 35 107 2.17E-8 T 15-10-2018 IPR010994 RuvA domain 2-like D934_01565 369ee7dbd27ded01524a0b9d7937aa71 242 Pfam PF04002 RadC-like JAB domain 122 240 2.6E-41 T 15-10-2018 IPR025657 RadC-like JAB domain D934_01565 369ee7dbd27ded01524a0b9d7937aa71 242 TIGRFAM TIGR00608 radc: DNA repair protein RadC 29 242 2.9E-66 T 15-10-2018 IPR001405 Uncharacterised protein family UPF0758 D934_10745 912f661bdaefcb6b2fd1303094412d9c 100 SUPERFAMILY SSF53335 10 100 7.41E-16 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_10745 912f661bdaefcb6b2fd1303094412d9c 100 Pfam PF01555 DNA methylase 28 100 1.6E-5 T 15-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 D934_10745 912f661bdaefcb6b2fd1303094412d9c 100 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 27 41 5.6E-9 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 D934_10745 912f661bdaefcb6b2fd1303094412d9c 100 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 84 100 5.6E-9 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 D934_10745 912f661bdaefcb6b2fd1303094412d9c 100 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 31 37 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D934_10745 912f661bdaefcb6b2fd1303094412d9c 100 Gene3D G3DSA:3.40.50.150 10 100 2.1E-15 T 15-10-2018 D934_10725 c28c5b03c09bf20c7725b62fc5ff277b 444 Gene3D G3DSA:3.90.1150.10 10 419 1.4E-175 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D934_10725 c28c5b03c09bf20c7725b62fc5ff277b 444 Pfam PF00202 Aminotransferase class-III 35 396 5.0E-76 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D934_10725 c28c5b03c09bf20c7725b62fc5ff277b 444 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 2.4E-187 T 15-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 D934_10725 c28c5b03c09bf20c7725b62fc5ff277b 444 Gene3D G3DSA:3.40.640.10 71 319 1.4E-175 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D934_10725 c28c5b03c09bf20c7725b62fc5ff277b 444 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 427 102.455 T 15-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 D934_10725 c28c5b03c09bf20c7725b62fc5ff277b 444 SUPERFAMILY SSF53383 1 425 1.08E-128 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D934_10725 c28c5b03c09bf20c7725b62fc5ff277b 444 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D934_05015 49c975223868e4eb8837b0d9c065c44c 155 SUPERFAMILY SSF82199 4 150 5.36E-40 T 15-10-2018 D934_05015 49c975223868e4eb8837b0d9c065c44c 155 SMART SM00317 3 128 2.9E-30 T 15-10-2018 IPR001214 SET domain GO:0005515 D934_05015 49c975223868e4eb8837b0d9c065c44c 155 Pfam PF00856 SET domain 14 122 1.2E-17 T 15-10-2018 IPR001214 SET domain GO:0005515 D934_05015 49c975223868e4eb8837b0d9c065c44c 155 Gene3D G3DSA:2.170.270.10 1 155 2.7E-41 T 15-10-2018 D934_08590 f53e13595e95c2fe5ebfa34d67fab63a 145 Pfam PF11681 Protein of unknown function (DUF3277) 26 136 1.7E-10 T 15-10-2018 IPR021695 Bacteriophage rv5, Orf52 D934_06700 f53e13595e95c2fe5ebfa34d67fab63a 145 Pfam PF11681 Protein of unknown function (DUF3277) 26 136 1.7E-10 T 15-10-2018 IPR021695 Bacteriophage rv5, Orf52 D934_12395 f53e13595e95c2fe5ebfa34d67fab63a 145 Pfam PF11681 Protein of unknown function (DUF3277) 26 136 1.7E-10 T 15-10-2018 IPR021695 Bacteriophage rv5, Orf52 D934_07635 4a7c4fb47b462625c1733316e937fdf8 230 Gene3D G3DSA:3.40.50.620 1 223 1.4E-71 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_07635 4a7c4fb47b462625c1733316e937fdf8 230 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 2.4E-74 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 D934_07635 4a7c4fb47b462625c1733316e937fdf8 230 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 56.238 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 D934_07635 4a7c4fb47b462625c1733316e937fdf8 230 SUPERFAMILY SSF52402 1 221 7.72E-61 T 15-10-2018 D934_07635 4a7c4fb47b462625c1733316e937fdf8 230 PIRSF PIRSF006293 1 225 2.1E-80 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 D934_07635 4a7c4fb47b462625c1733316e937fdf8 230 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 3.2E-58 T 15-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 D934_12460 ac17dc7eef2416bfa4e00c04350d14d5 645 Pfam PF12848 ABC transporter 217 293 5.7E-24 T 15-10-2018 IPR032781 ABC-transporter extension domain D934_12460 ac17dc7eef2416bfa4e00c04350d14d5 645 SUPERFAMILY SSF52540 2 238 3.58E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_12460 ac17dc7eef2416bfa4e00c04350d14d5 645 Pfam PF00005 ABC transporter 17 178 2.6E-22 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_12460 ac17dc7eef2416bfa4e00c04350d14d5 645 Pfam PF00005 ABC transporter 350 481 1.5E-20 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_12460 ac17dc7eef2416bfa4e00c04350d14d5 645 Gene3D G3DSA:3.40.50.300 275 561 2.4E-46 T 15-10-2018 D934_12460 ac17dc7eef2416bfa4e00c04350d14d5 645 Gene3D G3DSA:3.40.50.300 1 259 5.1E-60 T 15-10-2018 D934_12460 ac17dc7eef2416bfa4e00c04350d14d5 645 SMART SM00382 26 223 7.9E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_12460 ac17dc7eef2416bfa4e00c04350d14d5 645 SMART SM00382 359 524 2.0E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_12460 ac17dc7eef2416bfa4e00c04350d14d5 645 SUPERFAMILY SSF52540 347 530 3.93E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_12460 ac17dc7eef2416bfa4e00c04350d14d5 645 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_12460 ac17dc7eef2416bfa4e00c04350d14d5 645 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_07115 769fa6052d39ad8c40c40ef4700d83b2 453 Pfam PF03237 Terminase-like family 40 262 4.8E-32 T 15-10-2018 IPR004921 Terminase large subunit, T4likevirus-type D934_07115 769fa6052d39ad8c40c40ef4700d83b2 453 Gene3D G3DSA:3.30.420.280 252 440 2.1E-57 T 15-10-2018 D934_07115 769fa6052d39ad8c40c40ef4700d83b2 453 Pfam PF17289 Terminase RNaseH-like domain 281 432 6.7E-23 T 15-10-2018 IPR035421 Terminase, large subunit gp17-like D934_04515 769fa6052d39ad8c40c40ef4700d83b2 453 Pfam PF03237 Terminase-like family 40 262 4.8E-32 T 15-10-2018 IPR004921 Terminase large subunit, T4likevirus-type D934_04515 769fa6052d39ad8c40c40ef4700d83b2 453 Gene3D G3DSA:3.30.420.280 252 440 2.1E-57 T 15-10-2018 D934_04515 769fa6052d39ad8c40c40ef4700d83b2 453 Pfam PF17289 Terminase RNaseH-like domain 281 432 6.7E-23 T 15-10-2018 IPR035421 Terminase, large subunit gp17-like D934_05550 2fa44aece1b5a630dce1eb87d74af416 187 Gene3D G3DSA:3.90.870.10 2 186 5.1E-51 T 15-10-2018 D934_05550 2fa44aece1b5a630dce1eb87d74af416 187 SUPERFAMILY SSF55821 7 185 8.55E-48 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily D934_05550 2fa44aece1b5a630dce1eb87d74af416 187 Pfam PF01300 Telomere recombination 13 184 2.0E-38 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 D934_05550 2fa44aece1b5a630dce1eb87d74af416 187 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 186 37.708 T 15-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 D934_00285 1db8ba92f940e333582f95b2e2d5dd29 218 Pfam PF03550 Outer membrane lipoprotein LolB 60 213 3.3E-34 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 D934_00285 1db8ba92f940e333582f95b2e2d5dd29 218 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 17 213 1.1E-18 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 D934_00285 1db8ba92f940e333582f95b2e2d5dd29 218 SUPERFAMILY SSF89392 41 214 2.28E-37 T 15-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX D934_00285 1db8ba92f940e333582f95b2e2d5dd29 218 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 10 215 22.713 T 15-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 D934_00285 1db8ba92f940e333582f95b2e2d5dd29 218 Gene3D G3DSA:2.50.20.10 41 214 2.8E-34 T 15-10-2018 D934_06455 64310d4791d14356633346b8826d5e3b 148 SUPERFAMILY SSF50249 3 148 6.51E-50 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_06455 64310d4791d14356633346b8826d5e3b 148 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 148 5.1E-44 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D934_06455 64310d4791d14356633346b8826d5e3b 148 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 34.346 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D934_06455 64310d4791d14356633346b8826d5e3b 148 Pfam PF00436 Single-strand binding protein family 5 108 2.3E-38 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 D934_06455 64310d4791d14356633346b8826d5e3b 148 Gene3D G3DSA:2.40.50.140 1 124 1.6E-43 T 15-10-2018 D934_13225 f08dce72136e0fdd5188445c177ef463 244 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 30 244 28.248 T 15-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 D934_13225 f08dce72136e0fdd5188445c177ef463 244 SUPERFAMILY SSF53335 21 241 1.27E-33 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_13225 f08dce72136e0fdd5188445c177ef463 244 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 59 243 6.5E-42 T 15-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 D934_13225 f08dce72136e0fdd5188445c177ef463 244 Gene3D G3DSA:3.40.50.150 37 244 4.9E-58 T 15-10-2018 D934_13225 f08dce72136e0fdd5188445c177ef463 244 Pfam PF02390 Putative methyltransferase 70 239 5.8E-46 T 15-10-2018 D934_11660 504afb91c8258950fc901482d22b5553 88 PIRSF PIRSF006488 1 85 1.3E-26 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D934_11660 504afb91c8258950fc901482d22b5553 88 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 15.424 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D934_11660 504afb91c8258950fc901482d22b5553 88 SUPERFAMILY SSF116842 14 71 4.45E-18 T 15-10-2018 D934_11660 504afb91c8258950fc901482d22b5553 88 Gene3D G3DSA:1.10.287.1040 10 85 4.2E-23 T 15-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 D934_11660 504afb91c8258950fc901482d22b5553 88 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 26 53 6.0E-10 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D934_11660 504afb91c8258950fc901482d22b5553 88 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 15 68 1.2E-21 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D934_11660 504afb91c8258950fc901482d22b5553 88 Pfam PF02609 Exonuclease VII small subunit 15 65 7.8E-19 T 15-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D934_04625 5b7d1fb3fe87727ca6203cf67cde9abc 333 SUPERFAMILY SSF48576 15 333 2.08E-93 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily D934_04625 5b7d1fb3fe87727ca6203cf67cde9abc 333 Gene3D G3DSA:1.10.600.10 5 332 1.9E-104 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily D934_04625 5b7d1fb3fe87727ca6203cf67cde9abc 333 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site D934_04625 5b7d1fb3fe87727ca6203cf67cde9abc 333 Pfam PF00348 Polyprenyl synthetase 43 275 7.3E-74 T 15-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 D934_03825 452c7267200f6868b96715693c875620 799 Gene3D G3DSA:3.30.470.20 203 364 1.0E-54 T 15-10-2018 D934_03825 452c7267200f6868b96715693c875620 799 Gene3D G3DSA:3.20.20.60 485 797 7.0E-98 T 15-10-2018 D934_03825 452c7267200f6868b96715693c875620 799 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 489 795 4.3E-59 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 D934_03825 452c7267200f6868b96715693c875620 799 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 13 796 0.0 T 15-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 D934_03825 452c7267200f6868b96715693c875620 799 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 26 352 6.1E-113 T 15-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 D934_03825 452c7267200f6868b96715693c875620 799 Pfam PF00391 PEP-utilising enzyme, mobile domain 391 462 4.6E-25 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 D934_03825 452c7267200f6868b96715693c875620 799 SUPERFAMILY SSF51621 469 796 1.05E-93 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D934_03825 452c7267200f6868b96715693c875620 799 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 701 719 - T 15-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 D934_03825 452c7267200f6868b96715693c875620 799 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 421 432 - T 15-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 D934_03825 452c7267200f6868b96715693c875620 799 Gene3D G3DSA:3.50.30.10 365 484 7.4E-40 T 15-10-2018 D934_03825 452c7267200f6868b96715693c875620 799 SUPERFAMILY SSF52009 356 474 2.09E-34 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 D934_03825 452c7267200f6868b96715693c875620 799 PIRSF PIRSF000854 8 799 0.0 T 15-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 D934_03825 452c7267200f6868b96715693c875620 799 SUPERFAMILY SSF56059 10 392 4.59E-104 T 15-10-2018 D934_03825 452c7267200f6868b96715693c875620 799 Gene3D G3DSA:3.30.1490.20 9 202 8.6E-70 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D934_08195 5eda689376ad312c583b4644da3381ea 564 SUPERFAMILY SSF55826 218 386 1.06E-28 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 D934_08195 5eda689376ad312c583b4644da3381ea 564 Pfam PF03129 Anticodon binding domain 471 563 2.8E-12 T 15-10-2018 IPR004154 Anticodon-binding D934_08195 5eda689376ad312c583b4644da3381ea 564 Gene3D G3DSA:3.90.960.10 240 386 1.1E-222 T 15-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 D934_08195 5eda689376ad312c583b4644da3381ea 564 Gene3D G3DSA:3.40.50.800 4 548 1.1E-222 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily D934_08195 5eda689376ad312c583b4644da3381ea 564 Gene3D G3DSA:3.30.930.10 11 461 1.1E-222 T 15-10-2018 D934_08195 5eda689376ad312c583b4644da3381ea 564 SUPERFAMILY SSF52954 460 563 1.51E-23 T 15-10-2018 D934_08195 5eda689376ad312c583b4644da3381ea 564 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 563 38.938 T 15-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 D934_08195 5eda689376ad312c583b4644da3381ea 564 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 2.3E-44 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_08195 5eda689376ad312c583b4644da3381ea 564 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 561 8.5E-209 T 15-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 D934_08195 5eda689376ad312c583b4644da3381ea 564 Pfam PF04073 Aminoacyl-tRNA editing domain 256 375 1.0E-24 T 15-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 D934_08195 5eda689376ad312c583b4644da3381ea 564 SUPERFAMILY SSF55681 10 474 1.78E-101 T 15-10-2018 D934_08195 5eda689376ad312c583b4644da3381ea 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.9E-17 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 D934_08195 5eda689376ad312c583b4644da3381ea 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.9E-17 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 D934_08195 5eda689376ad312c583b4644da3381ea 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.9E-17 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 D934_08195 5eda689376ad312c583b4644da3381ea 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.9E-17 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 D934_01420 4dcac2f010a1b2aa15c2a8a213b7f2de 343 Gene3D G3DSA:3.20.20.70 6 343 7.6E-91 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_01420 4dcac2f010a1b2aa15c2a8a213b7f2de 343 Pfam PF03060 Nitronate monooxygenase 12 340 2.7E-67 T 15-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 D934_01420 4dcac2f010a1b2aa15c2a8a213b7f2de 343 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 210 230 - T 15-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 D934_01420 4dcac2f010a1b2aa15c2a8a213b7f2de 343 SUPERFAMILY SSF51412 10 313 2.9E-44 T 15-10-2018 D934_06675 4818f149ead27db09ae76d4cac2fb4c6 122 Pfam PF13262 Protein of unknown function (DUF4054) 10 112 2.3E-23 T 15-10-2018 IPR025127 Protein of unknown function DUF4054 D934_08565 4818f149ead27db09ae76d4cac2fb4c6 122 Pfam PF13262 Protein of unknown function (DUF4054) 10 112 2.3E-23 T 15-10-2018 IPR025127 Protein of unknown function DUF4054 D934_10625 a0a06f9085ac3882419d06dbc15ac293 217 SUPERFAMILY SSF52833 77 208 4.84E-20 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_10625 a0a06f9085ac3882419d06dbc15ac293 217 Gene3D G3DSA:3.40.30.10 83 213 9.3E-20 T 15-10-2018 D934_10625 a0a06f9085ac3882419d06dbc15ac293 217 Pfam PF13899 Thioredoxin-like 96 181 2.4E-12 T 15-10-2018 D934_02500 44d6c972efc814176988d75ebcde8558 146 Pfam PF02657 Fe-S metabolism associated domain 21 139 1.5E-42 T 15-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like D934_02500 44d6c972efc814176988d75ebcde8558 146 Gene3D G3DSA:3.90.1010.10 11 146 9.7E-47 T 15-10-2018 D934_02500 44d6c972efc814176988d75ebcde8558 146 SUPERFAMILY SSF82649 16 143 1.05E-41 T 15-10-2018 D934_09830 00f6caf4294146612503d86cb7df6328 430 SMART SM01210 330 423 8.7E-45 T 15-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D934_09830 00f6caf4294146612503d86cb7df6328 430 Gene3D G3DSA:3.30.1490.20 121 190 1.2E-24 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D934_09830 00f6caf4294146612503d86cb7df6328 430 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 41.467 T 15-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D934_09830 00f6caf4294146612503d86cb7df6328 430 SUPERFAMILY SSF51246 330 424 2.59E-27 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 D934_09830 00f6caf4294146612503d86cb7df6328 430 Gene3D G3DSA:3.30.470.20 191 329 3.3E-57 T 15-10-2018 D934_09830 00f6caf4294146612503d86cb7df6328 430 SMART SM01209 103 296 1.2E-131 T 15-10-2018 D934_09830 00f6caf4294146612503d86cb7df6328 430 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.7E-77 T 15-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D934_09830 00f6caf4294146612503d86cb7df6328 430 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 9.0E-25 T 15-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D934_09830 00f6caf4294146612503d86cb7df6328 430 SUPERFAMILY SSF56059 104 323 8.84E-65 T 15-10-2018 D934_09830 00f6caf4294146612503d86cb7df6328 430 Gene3D G3DSA:3.90.600.10 331 430 2.6E-28 T 15-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D934_09830 00f6caf4294146612503d86cb7df6328 430 SUPERFAMILY SSF52440 1 103 5.32E-35 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D934_09830 00f6caf4294146612503d86cb7df6328 430 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 6.6E-34 T 15-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D934_09830 00f6caf4294146612503d86cb7df6328 430 Gene3D G3DSA:3.40.50.20 2 95 3.7E-36 T 15-10-2018 D934_09830 00f6caf4294146612503d86cb7df6328 430 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 15-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D934_09830 00f6caf4294146612503d86cb7df6328 430 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.2E-164 T 15-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D934_10340 9a3af464bfaa7dab2874f81bed11a347 153 Pfam PF05433 Glycine zipper 2TM domain 61 107 5.4E-11 T 15-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 D934_11430 d310e2800919cccb1e445d636d7b091e 302 Hamap MF_01805 Segregation and condensation protein A [scpA]. 47 278 22.279 T 15-10-2018 IPR003768 Segregation and condensation protein A D934_11430 d310e2800919cccb1e445d636d7b091e 302 Pfam PF02616 Segregation and condensation protein ScpA 64 275 9.0E-29 T 15-10-2018 IPR003768 Segregation and condensation protein A D934_02325 22a213e61cf57798d3aee71e21928497 444 SUPERFAMILY SSF142984 255 338 2.62E-21 T 15-10-2018 D934_02325 22a213e61cf57798d3aee71e21928497 444 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 15-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02325 22a213e61cf57798d3aee71e21928497 444 Pfam PF10531 SLBB domain 257 305 1.5E-10 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02325 22a213e61cf57798d3aee71e21928497 444 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 62 233 3.4E-44 T 15-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02325 22a213e61cf57798d3aee71e21928497 444 SUPERFAMILY SSF140490 339 435 2.09E-34 T 15-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02325 22a213e61cf57798d3aee71e21928497 444 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 356 367 - T 15-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02325 22a213e61cf57798d3aee71e21928497 444 Gene3D G3DSA:1.20.1440.230 342 442 2.0E-33 T 15-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02325 22a213e61cf57798d3aee71e21928497 444 Gene3D G3DSA:3.40.50.11540 67 245 1.4E-73 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02325 22a213e61cf57798d3aee71e21928497 444 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 429 1.9E-194 T 15-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02325 22a213e61cf57798d3aee71e21928497 444 SMART SM00928 343 388 3.1E-26 T 15-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02325 22a213e61cf57798d3aee71e21928497 444 SUPERFAMILY SSF142019 20 252 8.37E-79 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02325 22a213e61cf57798d3aee71e21928497 444 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 346 426 1.8E-29 T 15-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02325 22a213e61cf57798d3aee71e21928497 444 Gene3D G3DSA:3.10.20.600 247 340 4.5E-27 T 15-10-2018 D934_11475 805fd81757bd68d31f5adb99ed12fa4c 54 Pfam PF04995 Heme exporter protein D (CcmD) 1 39 4.2E-7 T 15-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 D934_11455 ef92446cb70fefd629ff0f38736bf7e3 423 Gene3D G3DSA:3.40.640.10 81 320 5.3E-124 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D934_11455 ef92446cb70fefd629ff0f38736bf7e3 423 Pfam PF00155 Aminotransferase class I and II 69 420 5.2E-53 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D934_11455 ef92446cb70fefd629ff0f38736bf7e3 423 SUPERFAMILY SSF53383 43 422 1.48E-93 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D934_11455 ef92446cb70fefd629ff0f38736bf7e3 423 Gene3D G3DSA:3.90.1150.10 57 420 5.3E-124 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D934_05175 38d696beaf1a1b5cd6f53f0d82e34b47 177 Gene3D G3DSA:1.10.10.10 9 76 1.1E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_05175 38d696beaf1a1b5cd6f53f0d82e34b47 177 Pfam PF07471 Phage DNA packaging protein Nu1 9 158 2.5E-52 T 15-10-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit D934_05175 38d696beaf1a1b5cd6f53f0d82e34b47 177 SUPERFAMILY SSF46955 12 63 1.83E-8 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily D934_02315 0e733b7b3e9c97c4204c23e90b911c12 435 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 138 435 2.3E-118 T 15-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02315 0e733b7b3e9c97c4204c23e90b911c12 435 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 24 435 2.1E-181 T 15-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02315 0e733b7b3e9c97c4204c23e90b911c12 435 SUPERFAMILY SSF56762 34 435 2.49E-132 T 15-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02315 0e733b7b3e9c97c4204c23e90b911c12 435 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 15 435 48.472 T 15-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02315 0e733b7b3e9c97c4204c23e90b911c12 435 Gene3D G3DSA:1.10.645.20 22 435 7.3E-168 T 15-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02315 0e733b7b3e9c97c4204c23e90b911c12 435 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 61 72 - T 15-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_13635 2fd0d63641599268af9c53d57d6bb889 311 Pfam PF00892 EamA-like transporter family 11 141 9.2E-18 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D934_13635 2fd0d63641599268af9c53d57d6bb889 311 Pfam PF00892 EamA-like transporter family 151 278 5.0E-16 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D934_13635 2fd0d63641599268af9c53d57d6bb889 311 SUPERFAMILY SSF103481 44 144 1.7E-16 T 15-10-2018 D934_13635 2fd0d63641599268af9c53d57d6bb889 311 SUPERFAMILY SSF103481 185 282 1.7E-16 T 15-10-2018 D934_05005 1f058634dd237427b6cc4fc2559f1e62 485 SUPERFAMILY SSF101960 41 482 3.92E-137 T 15-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily D934_05005 1f058634dd237427b6cc4fc2559f1e62 485 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 476 7.4E-194 T 15-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 D934_05005 1f058634dd237427b6cc4fc2559f1e62 485 Pfam PF01458 Uncharacterized protein family (UPF0051) 223 456 5.2E-68 T 15-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.4E-72 T 15-10-2018 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 1.4E-72 T 15-10-2018 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 1.4E-72 T 15-10-2018 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 1.4E-72 T 15-10-2018 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 318 325 1.4E-72 T 15-10-2018 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 1.4E-72 T 15-10-2018 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 289 1.4E-72 T 15-10-2018 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 1.4E-72 T 15-10-2018 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 353 374 1.4E-72 T 15-10-2018 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 15-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 475 3.7E-155 T 15-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 Gene3D G3DSA:3.30.390.30 356 478 5.8E-44 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 Gene3D G3DSA:3.50.50.60 5 343 1.7E-109 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 SUPERFAMILY SSF51905 1 347 2.59E-63 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PIRSF PIRSF000350 1 476 1.1E-80 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 SUPERFAMILY SSF55424 353 476 8.25E-41 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 338 6.4E-66 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 Gene3D G3DSA:3.50.50.60 163 288 1.7E-109 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 465 6.0E-36 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 1.0E-35 T 15-10-2018 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 325 1.0E-35 T 15-10-2018 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 290 1.0E-35 T 15-10-2018 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 1.0E-35 T 15-10-2018 D934_10330 b0afaf567cfd5424e6817d9e987d13d0 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.0E-35 T 15-10-2018 D934_12145 78c83cef3c9ed6cd5c67eae1b7856d94 699 Gene3D G3DSA:3.40.50.300 9 224 1.0E-5 T 15-10-2018 D934_12145 78c83cef3c9ed6cd5c67eae1b7856d94 699 Pfam PF05876 Phage terminase large subunit (GpA) 47 634 2.9E-166 T 15-10-2018 IPR008866 Bacteriophage lambda, GpA D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR00418 DNA topoisomerase II family signature 431 445 1.7E-70 T 15-10-2018 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR00418 DNA topoisomerase II family signature 536 548 1.7E-70 T 15-10-2018 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR00418 DNA topoisomerase II family signature 46 61 1.7E-70 T 15-10-2018 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR00418 DNA topoisomerase II family signature 279 292 1.7E-70 T 15-10-2018 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR00418 DNA topoisomerase II family signature 498 514 1.7E-70 T 15-10-2018 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR00418 DNA topoisomerase II family signature 81 94 1.7E-70 T 15-10-2018 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR00418 DNA topoisomerase II family signature 516 533 1.7E-70 T 15-10-2018 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR00418 DNA topoisomerase II family signature 124 138 1.7E-70 T 15-10-2018 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR00418 DNA topoisomerase II family signature 746 762 1.7E-70 T 15-10-2018 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 Gene3D G3DSA:3.40.50.670 682 812 3.6E-24 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 184 1.6E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 742 803 3.6E-28 T 15-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 Gene3D G3DSA:3.30.565.10 14 231 1.1E-86 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 SMART SM00387 42 186 7.5E-28 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR01159 DNA gyrase subunit B signature 191 206 2.2E-72 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR01159 DNA gyrase subunit B signature 231 253 2.2E-72 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR01159 DNA gyrase subunit B signature 16 26 2.2E-72 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR01159 DNA gyrase subunit B signature 371 385 2.2E-72 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR01159 DNA gyrase subunit B signature 323 339 2.2E-72 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR01159 DNA gyrase subunit B signature 385 405 2.2E-72 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR01159 DNA gyrase subunit B signature 206 219 2.2E-72 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR01159 DNA gyrase subunit B signature 767 779 2.2E-72 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR01159 DNA gyrase subunit B signature 481 490 2.2E-72 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 PRINTS PR01159 DNA gyrase subunit B signature 783 799 2.2E-72 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 16 814 95.388 T 15-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 Gene3D G3DSA:3.40.50.670 409 578 4.5E-71 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 SUPERFAMILY SSF55874 16 221 2.62E-68 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 Pfam PF01751 Toprim domain 430 540 4.9E-18 T 15-10-2018 IPR006171 TOPRIM domain D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 16 814 1.9E-291 T 15-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 Pfam PF00204 DNA gyrase B 232 401 1.6E-56 T 15-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 Gene3D G3DSA:3.30.230.10 232 403 1.3E-69 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 SMART SM00433 46 807 5.3E-253 T 15-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 SUPERFAMILY SSF56719 405 806 4.18E-83 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 SUPERFAMILY SSF54211 232 402 1.86E-54 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D934_00935 f0033e3cf68e78f2a45769c291cbb582 814 ProSitePatterns PS00177 DNA topoisomerase II signature. 433 441 - T 15-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D934_12580 abfd608d79eba44462e95dc7adeca987 258 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 1.2E-95 T 15-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 D934_12580 abfd608d79eba44462e95dc7adeca987 258 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 252 40.425 T 15-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 D934_12580 abfd608d79eba44462e95dc7adeca987 258 SMART SM00849 12 164 1.8E-34 T 15-10-2018 IPR001279 Metallo-beta-lactamase D934_12580 abfd608d79eba44462e95dc7adeca987 258 SUPERFAMILY SSF56281 1 253 2.03E-67 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D934_12580 abfd608d79eba44462e95dc7adeca987 258 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 165 252 4.9E-26 T 15-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 D934_12580 abfd608d79eba44462e95dc7adeca987 258 Gene3D G3DSA:3.60.15.10 1 252 2.0E-85 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D934_12580 abfd608d79eba44462e95dc7adeca987 258 Pfam PF00753 Metallo-beta-lactamase superfamily 15 164 6.7E-20 T 15-10-2018 IPR001279 Metallo-beta-lactamase D934_12580 abfd608d79eba44462e95dc7adeca987 258 PIRSF PIRSF005457 1 252 5.2E-86 T 15-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 D934_02790 13756ff3b3c9e9c801e5fca0add1a610 219 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 11 211 5.7E-81 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D934_02790 13756ff3b3c9e9c801e5fca0add1a610 219 SUPERFAMILY SSF51569 8 212 1.21E-60 T 15-10-2018 D934_02790 13756ff3b3c9e9c801e5fca0add1a610 219 Gene3D G3DSA:3.20.20.70 1 216 4.9E-68 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_02790 13756ff3b3c9e9c801e5fca0add1a610 219 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 42 51 - T 15-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D934_02790 13756ff3b3c9e9c801e5fca0add1a610 219 Pfam PF01081 KDPG and KHG aldolase 12 203 9.5E-62 T 15-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 Gene3D G3DSA:3.30.499.10 332 474 5.9E-49 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 Pfam PF00330 Aconitase family (aconitate hydratase) 9 464 3.3E-155 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 PRINTS PR00415 Aconitase family signature 139 154 3.0E-47 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 PRINTS PR00415 Aconitase family signature 201 214 3.0E-47 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 PRINTS PR00415 Aconitase family signature 125 138 3.0E-47 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 PRINTS PR00415 Aconitase family signature 349 360 3.0E-47 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 PRINTS PR00415 Aconitase family signature 406 419 3.0E-47 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 PRINTS PR00415 Aconitase family signature 215 228 3.0E-47 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 PRINTS PR00415 Aconitase family signature 88 101 3.0E-47 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 PRINTS PR00415 Aconitase family signature 114 122 3.0E-47 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 PRINTS PR00415 Aconitase family signature 292 306 3.0E-47 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 4.0E-234 T 15-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 473 61.239 T 15-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 Gene3D G3DSA:3.30.499.20 12 292 2.5E-95 T 15-10-2018 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 D934_11090 0583b2034d389e88a2fed747bc8d723d 474 SUPERFAMILY SSF53732 3 472 1.44E-161 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 D934_02920 82925b4c013a48cc9b6612f2d9f1215b 169 Pfam PF04985 Phage tail tube protein FII 6 168 1.0E-53 T 15-10-2018 IPR006498 Tail tube protein D934_02920 82925b4c013a48cc9b6612f2d9f1215b 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 169 1.4E-77 T 15-10-2018 IPR006498 Tail tube protein D934_05085 82925b4c013a48cc9b6612f2d9f1215b 169 Pfam PF04985 Phage tail tube protein FII 6 168 1.0E-53 T 15-10-2018 IPR006498 Tail tube protein D934_05085 82925b4c013a48cc9b6612f2d9f1215b 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 169 1.4E-77 T 15-10-2018 IPR006498 Tail tube protein D934_06410 82925b4c013a48cc9b6612f2d9f1215b 169 Pfam PF04985 Phage tail tube protein FII 6 168 1.0E-53 T 15-10-2018 IPR006498 Tail tube protein D934_06410 82925b4c013a48cc9b6612f2d9f1215b 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 169 1.4E-77 T 15-10-2018 IPR006498 Tail tube protein D934_01780 1374ec4afdf3967f999d3d5d79ff82ff 244 Pfam PF04452 RNA methyltransferase 21 239 1.4E-72 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 D934_01780 1374ec4afdf3967f999d3d5d79ff82ff 244 SUPERFAMILY SSF75217 74 244 4.87E-52 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases D934_01780 1374ec4afdf3967f999d3d5d79ff82ff 244 Gene3D G3DSA:3.40.1280.10 74 244 1.9E-58 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D934_01780 1374ec4afdf3967f999d3d5d79ff82ff 244 SUPERFAMILY SSF88697 3 69 3.73E-14 T 15-10-2018 IPR015947 PUA-like superfamily D934_01780 1374ec4afdf3967f999d3d5d79ff82ff 244 PIRSF PIRSF015601 5 244 7.6E-57 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 D934_01780 1374ec4afdf3967f999d3d5d79ff82ff 244 Gene3D G3DSA:2.40.240.20 1 68 9.5E-16 T 15-10-2018 D934_01780 1374ec4afdf3967f999d3d5d79ff82ff 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 244 2.1E-54 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 D934_03265 c68bf0ae13d1b08d77fe90e0d44f7791 457 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 8 456 8.0E-192 T 15-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 D934_03265 c68bf0ae13d1b08d77fe90e0d44f7791 457 SUPERFAMILY SSF51161 256 439 2.11E-43 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily D934_03265 c68bf0ae13d1b08d77fe90e0d44f7791 457 Gene3D G3DSA:3.90.550.10 6 228 2.0E-58 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_03265 c68bf0ae13d1b08d77fe90e0d44f7791 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 2.5E-7 T 15-10-2018 IPR001451 Hexapeptide repeat D934_03265 c68bf0ae13d1b08d77fe90e0d44f7791 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 397 430 8.3E-6 T 15-10-2018 IPR001451 Hexapeptide repeat D934_03265 c68bf0ae13d1b08d77fe90e0d44f7791 457 Gene3D G3DSA:2.160.10.10 230 457 7.6E-58 T 15-10-2018 D934_03265 c68bf0ae13d1b08d77fe90e0d44f7791 457 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 6 453 39.408 T 15-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 D934_03265 c68bf0ae13d1b08d77fe90e0d44f7791 457 Pfam PF12804 MobA-like NTP transferase domain 10 135 3.7E-24 T 15-10-2018 IPR025877 MobA-like NTP transferase D934_03265 c68bf0ae13d1b08d77fe90e0d44f7791 457 SUPERFAMILY SSF53448 7 249 8.88E-57 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_07935 c379b09f5422ba016bc6d2e4e7c3c64f 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 478 3.3E-14 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_07935 c379b09f5422ba016bc6d2e4e7c3c64f 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 2.1E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_07935 c379b09f5422ba016bc6d2e4e7c3c64f 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 477 2.1E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_07935 c379b09f5422ba016bc6d2e4e7c3c64f 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 2.1E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_07935 c379b09f5422ba016bc6d2e4e7c3c64f 480 Gene3D G3DSA:3.30.565.10 332 478 5.3E-28 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_07935 c379b09f5422ba016bc6d2e4e7c3c64f 480 Gene3D G3DSA:1.10.287.130 217 322 1.1E-10 T 15-10-2018 D934_07935 c379b09f5422ba016bc6d2e4e7c3c64f 480 SMART SM00387 367 480 3.8E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_07935 c379b09f5422ba016bc6d2e4e7c3c64f 480 SUPERFAMILY SSF47384 248 313 4.32E-6 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D934_07935 c379b09f5422ba016bc6d2e4e7c3c64f 480 SUPERFAMILY SSF55874 316 477 2.62E-26 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_00950 695f14902ddebbbc74a6330fc1284552 397 Gene3D G3DSA:1.25.40.10 315 396 8.5E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_00950 695f14902ddebbbc74a6330fc1284552 397 Pfam PF13181 Tetratricopeptide repeat 354 381 0.12 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_00950 695f14902ddebbbc74a6330fc1284552 397 Pfam PF13432 Tetratricopeptide repeat 113 173 3.0E-4 T 15-10-2018 D934_00950 695f14902ddebbbc74a6330fc1284552 397 Pfam PF13432 Tetratricopeptide repeat 185 247 3.9E-4 T 15-10-2018 D934_00950 695f14902ddebbbc74a6330fc1284552 397 SMART SM00028 353 386 14.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_00950 695f14902ddebbbc74a6330fc1284552 397 SMART SM00028 320 352 330.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_00950 695f14902ddebbbc74a6330fc1284552 397 SMART SM00028 179 212 0.26 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_00950 695f14902ddebbbc74a6330fc1284552 397 SUPERFAMILY SSF48452 111 213 3.47E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_00950 695f14902ddebbbc74a6330fc1284552 397 Gene3D G3DSA:1.25.40.10 222 302 1.4E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_00950 695f14902ddebbbc74a6330fc1284552 397 SUPERFAMILY SSF48452 180 382 5.22E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_00950 695f14902ddebbbc74a6330fc1284552 397 Gene3D G3DSA:1.25.40.10 107 221 3.0E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_11035 ee440adbe4e4c5081ed30bbdab8281b7 394 ProDom PD011569 METAL-BINDING IRON IRON-SULFUR 4FE-4S FERREDOXIN OXIDOREDUCTASE DOMAIN ELECTRON METHANOGENESIS A 81 307 4.0E-4 T 15-10-2018 IPR002708 Homocysteine biosynthesis enzyme, sulfur-incorporation D934_11035 ee440adbe4e4c5081ed30bbdab8281b7 394 Gene3D G3DSA:3.40.50.2000 216 371 3.0E-139 T 15-10-2018 D934_11035 ee440adbe4e4c5081ed30bbdab8281b7 394 Gene3D G3DSA:3.40.50.11010 28 376 3.0E-139 T 15-10-2018 D934_11035 ee440adbe4e4c5081ed30bbdab8281b7 394 SUPERFAMILY SSF53756 69 381 4.9E-11 T 15-10-2018 D934_09705 fd6c28197fbca6aedf47b37beb7b0143 485 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 462 4.7E-161 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 D934_09705 fd6c28197fbca6aedf47b37beb7b0143 485 Gene3D G3DSA:3.60.20.10 2 463 1.9E-145 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D934_09705 fd6c28197fbca6aedf47b37beb7b0143 485 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 462 44.862 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 D934_09705 fd6c28197fbca6aedf47b37beb7b0143 485 SUPERFAMILY SSF56235 2 255 4.72E-65 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D934_09705 fd6c28197fbca6aedf47b37beb7b0143 485 Pfam PF13522 Glutamine amidotransferase domain 57 206 4.5E-15 T 15-10-2018 D934_09705 fd6c28197fbca6aedf47b37beb7b0143 485 PIRSF PIRSF000485 1 476 3.3E-155 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 D934_09705 fd6c28197fbca6aedf47b37beb7b0143 485 SUPERFAMILY SSF53271 248 471 4.01E-70 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like D934_09705 fd6c28197fbca6aedf47b37beb7b0143 485 Gene3D G3DSA:3.40.50.2020 273 442 1.9E-145 T 15-10-2018 D934_13445 5c5dd3986a5e409ab43ae121394a7316 225 Gene3D G3DSA:1.10.10.10 120 223 6.5E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_13445 5c5dd3986a5e409ab43ae121394a7316 225 SMART SM00862 146 220 1.4E-15 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D934_13445 5c5dd3986a5e409ab43ae121394a7316 225 SMART SM00448 1 113 1.3E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_13445 5c5dd3986a5e409ab43ae121394a7316 225 SUPERFAMILY SSF52172 2 171 1.71E-38 T 15-10-2018 IPR011006 CheY-like superfamily D934_13445 5c5dd3986a5e409ab43ae121394a7316 225 Pfam PF00072 Response regulator receiver domain 3 112 2.7E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_13445 5c5dd3986a5e409ab43ae121394a7316 225 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-36 T 15-10-2018 D934_13445 5c5dd3986a5e409ab43ae121394a7316 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 1.2E-16 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D934_06135 a677d4acc60bb4a09eb962666ff0b0e8 273 Pfam PF13614 AAA domain 12 186 5.0E-62 T 15-10-2018 IPR025669 AAA domain D934_06135 a677d4acc60bb4a09eb962666ff0b0e8 273 Gene3D G3DSA:3.40.50.300 5 272 8.7E-76 T 15-10-2018 D934_06135 a677d4acc60bb4a09eb962666ff0b0e8 273 SUPERFAMILY SSF52540 10 258 4.11E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04755 411328f143326698a608a6cc685305e4 294 Gene3D G3DSA:2.160.10.10 209 293 2.1E-9 T 15-10-2018 D934_04755 411328f143326698a608a6cc685305e4 294 SUPERFAMILY SSF51161 40 278 1.18E-36 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily D934_04755 411328f143326698a608a6cc685305e4 294 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 206 234 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_04755 411328f143326698a608a6cc685305e4 294 Gene3D G3DSA:2.160.10.10 31 208 5.8E-31 T 15-10-2018 D934_04755 411328f143326698a608a6cc685305e4 294 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 147 4.5E-6 T 15-10-2018 IPR001451 Hexapeptide repeat D934_04755 411328f143326698a608a6cc685305e4 294 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 168 201 3.2E-4 T 15-10-2018 IPR001451 Hexapeptide repeat D934_04755 411328f143326698a608a6cc685305e4 294 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 68 98 3.7E-5 T 15-10-2018 IPR001451 Hexapeptide repeat D934_04755 411328f143326698a608a6cc685305e4 294 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 239 267 0.0022 T 15-10-2018 IPR001451 Hexapeptide repeat D934_05050 3d64b413107180c66b0d85064e67a33f 451 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 46 443 4.2E-97 T 15-10-2018 IPR018721 Protein of unknown function DUF2252 D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 SUPERFAMILY SSF88659 213 286 4.86E-16 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 8 288 50.986 T 15-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 55 283 3.9E-31 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 256 282 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 Gene3D G3DSA:1.10.10.10 212 286 1.9E-14 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 SUPERFAMILY SSF88946 22 129 2.22E-38 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 Pfam PF04545 Sigma-70, region 4 233 283 2.1E-15 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 Gene3D G3DSA:1.10.601.10 16 132 1.2E-29 T 15-10-2018 D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 Pfam PF04542 Sigma-70 region 2 60 129 6.4E-17 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 21 286 1.2E-120 T 15-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 84 97 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 PRINTS PR00046 Major sigma-70 factor signature 256 271 1.6E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 PRINTS PR00046 Major sigma-70 factor signature 84 97 1.6E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 PRINTS PR00046 Major sigma-70 factor signature 271 282 1.6E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 PRINTS PR00046 Major sigma-70 factor signature 236 248 1.6E-19 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D934_00440 ebd003bfb6690675b6ee5bb8536ad811 288 PIRSF PIRSF000770 21 288 2.0E-33 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D934_07055 5afcd51babf61cf4d778096998bf9361 109 SUPERFAMILY SSF47413 4 61 1.01E-12 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_07055 5afcd51babf61cf4d778096998bf9361 109 Gene3D G3DSA:1.10.260.40 1 69 1.0E-21 T 15-10-2018 D934_07055 5afcd51babf61cf4d778096998bf9361 109 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 5 62 5.4E-20 T 15-10-2018 IPR031856 Putative bacterial antitoxin YdaS D934_03130 194ac856725518e3d186bf54e8628a7a 302 SUPERFAMILY SSF75620 6 291 3.92E-120 T 15-10-2018 D934_03130 194ac856725518e3d186bf54e8628a7a 302 SMART SM00937 13 123 1.5E-54 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 D934_03130 194ac856725518e3d186bf54e8628a7a 302 Gene3D G3DSA:3.30.70.1660 58 286 1.0E-98 T 15-10-2018 D934_03130 194ac856725518e3d186bf54e8628a7a 302 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 293 32.079 T 15-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 D934_03130 194ac856725518e3d186bf54e8628a7a 302 Pfam PF00472 RF-1 domain 156 265 3.1E-41 T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 D934_03130 194ac856725518e3d186bf54e8628a7a 302 Pfam PF03462 PCRF domain 10 148 8.8E-48 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 D934_03130 194ac856725518e3d186bf54e8628a7a 302 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 173 189 - T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 D934_03130 194ac856725518e3d186bf54e8628a7a 302 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 291 1.0E-137 T 15-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 D934_03130 194ac856725518e3d186bf54e8628a7a 302 Gene3D G3DSA:3.30.160.20 154 249 1.0E-98 T 15-10-2018 D934_07315 adfe249968d2715eceb8a06824e746d8 190 TIGRFAM TIGR04273 Y_sulf_Ax21: sulfation-dependent quorum factor, Ax21 family 6 190 1.6E-88 T 15-10-2018 IPR026364 Ax21 family D934_07315 adfe249968d2715eceb8a06824e746d8 190 Gene3D G3DSA:2.40.160.10 17 125 6.9E-6 T 15-10-2018 IPR023614 Porin domain superfamily D934_07315 adfe249968d2715eceb8a06824e746d8 190 SUPERFAMILY SSF56935 15 166 4.03E-7 T 15-10-2018 D934_12570 d189903626eb6a4ab6e7f5f7dbe9280f 150 Pfam PF00075 RNase H 2 139 3.0E-45 T 15-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 D934_12570 d189903626eb6a4ab6e7f5f7dbe9280f 150 Hamap MF_00042 Ribonuclease H [rnhA]. 1 149 35.556 T 15-10-2018 IPR022892 Ribonuclease HI GO:0004523 D934_12570 d189903626eb6a4ab6e7f5f7dbe9280f 150 SUPERFAMILY SSF53098 2 138 1.64E-52 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_12570 d189903626eb6a4ab6e7f5f7dbe9280f 150 Gene3D G3DSA:3.30.420.10 1 149 9.4E-56 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D934_09665 399c05d8922f6af810b1b645451058b0 164 Gene3D G3DSA:3.10.450.50 20 162 4.6E-44 T 15-10-2018 D934_09665 399c05d8922f6af810b1b645451058b0 164 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 36 159 1.6E-30 T 15-10-2018 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 D934_09665 399c05d8922f6af810b1b645451058b0 164 PIRSF PIRSF028470 1 162 2.4E-55 T 15-10-2018 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related D934_09665 399c05d8922f6af810b1b645451058b0 164 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 36 159 2.1E-24 T 15-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 D934_09665 399c05d8922f6af810b1b645451058b0 164 SUPERFAMILY SSF54427 34 158 4.2E-29 T 15-10-2018 IPR032710 NTF2-like domain superfamily D934_01320 1165b9e5fdeebde612af38949a3ab827 126 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 20 121 9.5E-22 T 15-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein D934_01320 1165b9e5fdeebde612af38949a3ab827 126 SUPERFAMILY SSF64076 4 122 8.11E-28 T 15-10-2018 IPR036748 MTH938-like superfamily D934_01320 1165b9e5fdeebde612af38949a3ab827 126 Gene3D G3DSA:3.40.1230.10 14 123 2.0E-28 T 15-10-2018 IPR036748 MTH938-like superfamily D934_01295 f4963c20d5fc67be9455a87b7ff5e919 298 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D934_01295 f4963c20d5fc67be9455a87b7ff5e919 298 SUPERFAMILY SSF51717 11 278 5.76E-98 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D934_01295 f4963c20d5fc67be9455a87b7ff5e919 298 Gene3D G3DSA:3.20.20.20 1 284 1.1E-107 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D934_01295 f4963c20d5fc67be9455a87b7ff5e919 298 Pfam PF00809 Pterin binding enzyme 23 262 2.1E-79 T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D934_01295 f4963c20d5fc67be9455a87b7ff5e919 298 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 56 69 - T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D934_01295 f4963c20d5fc67be9455a87b7ff5e919 298 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 22 276 1.3E-95 T 15-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 D934_10380 83f2a1ab27962a9a67705b9905717355 142 Pfam PF00572 Ribosomal protein L13 15 138 2.4E-52 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 D934_10380 83f2a1ab27962a9a67705b9905717355 142 SUPERFAMILY SSF52161 1 140 1.57E-57 T 15-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 D934_10380 83f2a1ab27962a9a67705b9905717355 142 Gene3D G3DSA:3.90.1180.10 1 142 3.5E-60 T 15-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 D934_10380 83f2a1ab27962a9a67705b9905717355 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.782 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 D934_10380 83f2a1ab27962a9a67705b9905717355 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 15-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 D934_10380 83f2a1ab27962a9a67705b9905717355 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 3 142 5.2E-61 T 15-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_10380 83f2a1ab27962a9a67705b9905717355 142 PIRSF PIRSF002181 1 142 3.8E-49 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 D934_12470 85d61c4ad586442da488bba44d301bb9 131 SUPERFAMILY SSF52833 6 121 2.65E-25 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_12470 85d61c4ad586442da488bba44d301bb9 131 Pfam PF01323 DSBA-like thioredoxin domain 6 116 1.1E-26 T 15-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 D934_12470 85d61c4ad586442da488bba44d301bb9 131 Gene3D G3DSA:3.40.30.10 2 118 5.9E-30 T 15-10-2018 D934_02425 e7a4b45d5aace5537ff4f96dca9bd296 764 Pfam PF01515 Phosphate acetyl/butaryl transferase 428 748 7.2E-86 T 15-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 D934_02425 e7a4b45d5aace5537ff4f96dca9bd296 764 Gene3D G3DSA:3.40.50.10380 1 161 2.6E-67 T 15-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 D934_02425 e7a4b45d5aace5537ff4f96dca9bd296 764 Gene3D G3DSA:3.40.50.720 162 444 1.3E-78 T 15-10-2018 D934_02425 e7a4b45d5aace5537ff4f96dca9bd296 764 Gene3D G3DSA:3.40.50.10950 445 748 2.7E-83 T 15-10-2018 D934_02425 e7a4b45d5aace5537ff4f96dca9bd296 764 SUPERFAMILY SSF53223 12 162 1.65E-51 T 15-10-2018 D934_02425 e7a4b45d5aace5537ff4f96dca9bd296 764 SMART SM01274 19 152 2.4E-77 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 D934_02425 e7a4b45d5aace5537ff4f96dca9bd296 764 SUPERFAMILY SSF51735 164 451 7.44E-83 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_02425 e7a4b45d5aace5537ff4f96dca9bd296 764 Pfam PF00390 Malic enzyme, N-terminal domain 20 152 1.9E-27 T 15-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 D934_02425 e7a4b45d5aace5537ff4f96dca9bd296 764 Pfam PF03949 Malic enzyme, NAD binding domain 166 359 6.3E-19 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 D934_02425 e7a4b45d5aace5537ff4f96dca9bd296 764 SUPERFAMILY SSF53659 428 751 2.22E-82 T 15-10-2018 D934_02425 e7a4b45d5aace5537ff4f96dca9bd296 764 Gene3D G3DSA:3.40.50.10750 571 724 2.7E-83 T 15-10-2018 D934_02425 e7a4b45d5aace5537ff4f96dca9bd296 764 SMART SM00919 164 399 6.5E-126 T 15-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 D934_02425 e7a4b45d5aace5537ff4f96dca9bd296 764 PIRSF PIRSF036684 1 756 0.0 T 15-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 D934_13015 5462552b856a946215ece1853443dfed 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 319 2.6E-112 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 D934_13015 5462552b856a946215ece1853443dfed 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 315 1.8E-96 T 15-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 D934_13015 5462552b856a946215ece1853443dfed 330 SUPERFAMILY SSF53659 4 323 4.55E-99 T 15-10-2018 D934_13015 5462552b856a946215ece1853443dfed 330 Gene3D G3DSA:3.40.718.10 2 324 8.6E-108 T 15-10-2018 D934_13015 5462552b856a946215ece1853443dfed 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 323 34.815 T 15-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 D934_12100 3626855acf20a874be5429b0ce110e58 139 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 7 138 1.3E-67 T 15-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 D934_12100 3626855acf20a874be5429b0ce110e58 139 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 119 130 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D934_12100 3626855acf20a874be5429b0ce110e58 139 Gene3D G3DSA:3.30.70.20 75 139 5.8E-14 T 15-10-2018 D934_12100 3626855acf20a874be5429b0ce110e58 139 Pfam PF14697 4Fe-4S dicluster domain 82 135 1.1E-14 T 15-10-2018 D934_12100 3626855acf20a874be5429b0ce110e58 139 Pfam PF04060 Putative Fe-S cluster 17 49 6.5E-15 T 15-10-2018 IPR007202 4Fe-4S domain GO:0051536 D934_12100 3626855acf20a874be5429b0ce110e58 139 Gene3D G3DSA:3.20.20.20 8 74 3.1E-14 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D934_12100 3626855acf20a874be5429b0ce110e58 139 SUPERFAMILY SSF54862 10 138 1.77E-27 T 15-10-2018 D934_09555 7baadaef9cfd661a57145c7eea092a99 190 SUPERFAMILY SSF48613 5 177 3.26E-25 T 15-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 D934_09555 7baadaef9cfd661a57145c7eea092a99 190 Gene3D G3DSA:1.20.910.10 1 187 5.7E-45 T 15-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 D934_09555 7baadaef9cfd661a57145c7eea092a99 190 Pfam PF14518 Iron-containing redox enzyme 2 163 3.7E-20 T 15-10-2018 D934_07910 4d8067bce408480a1854084a05d91e52 84 Pfam PF01381 Helix-turn-helix 14 66 8.3E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_07910 4d8067bce408480a1854084a05d91e52 84 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 9 80 2.1E-17 T 15-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 D934_07910 4d8067bce408480a1854084a05d91e52 84 SMART SM00530 13 68 9.8E-5 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_07910 4d8067bce408480a1854084a05d91e52 84 Gene3D G3DSA:1.10.260.40 4 81 3.2E-26 T 15-10-2018 D934_07910 4d8067bce408480a1854084a05d91e52 84 SUPERFAMILY SSF47413 9 79 8.16E-21 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_02485 9fb78bf9ce5d4425714c211399faca21 313 Gene3D G3DSA:1.20.120.910 184 312 3.4E-29 T 15-10-2018 D934_02485 9fb78bf9ce5d4425714c211399faca21 313 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 190 312 27.627 T 15-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 D934_02485 9fb78bf9ce5d4425714c211399faca21 313 SUPERFAMILY SSF57716 273 311 5.27E-6 T 15-10-2018 D934_02485 9fb78bf9ce5d4425714c211399faca21 313 SUPERFAMILY SSF109635 182 269 3.66E-26 T 15-10-2018 IPR037187 DksA, N-terminal domain superfamily D934_02485 9fb78bf9ce5d4425714c211399faca21 313 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 194 303 3.4E-41 T 15-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 D934_02485 9fb78bf9ce5d4425714c211399faca21 313 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 272 303 4.6E-7 T 15-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 D934_09040 c3e75cf9c93a0e993b26cd7a5aced6e5 249 PIRSF PIRSF028589 1 249 1.7E-112 T 15-10-2018 IPR016893 Protein of unknown function UCP028589 D934_07820 c3e75cf9c93a0e993b26cd7a5aced6e5 249 PIRSF PIRSF028589 1 249 1.7E-112 T 15-10-2018 IPR016893 Protein of unknown function UCP028589 D934_05650 cab9c65a0a9b27e745071c369f1b52f5 337 SUPERFAMILY SSF144083 273 334 2.88E-16 T 15-10-2018 D934_05650 cab9c65a0a9b27e745071c369f1b52f5 337 Gene3D G3DSA:1.20.58.340 261 337 5.9E-19 T 15-10-2018 D934_05650 cab9c65a0a9b27e745071c369f1b52f5 337 Gene3D G3DSA:1.20.58.340 147 259 1.5E-31 T 15-10-2018 D934_05650 cab9c65a0a9b27e745071c369f1b52f5 337 Pfam PF01544 CorA-like Mg2+ transporter protein 46 333 4.7E-60 T 15-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 D934_05650 cab9c65a0a9b27e745071c369f1b52f5 337 Gene3D G3DSA:3.30.460.20 2 146 5.9E-27 T 15-10-2018 D934_05650 cab9c65a0a9b27e745071c369f1b52f5 337 SUPERFAMILY SSF143865 3 269 1.44E-68 T 15-10-2018 D934_11415 949f19560644f9c632b6f88b42daf312 430 SUPERFAMILY SSF53850 27 406 1.47E-83 T 15-10-2018 D934_11415 949f19560644f9c632b6f88b42daf312 430 Gene3D G3DSA:3.40.190.10 41 368 1.4E-136 T 15-10-2018 D934_11415 949f19560644f9c632b6f88b42daf312 430 Gene3D G3DSA:3.40.190.10 141 405 1.4E-136 T 15-10-2018 D934_11415 949f19560644f9c632b6f88b42daf312 430 Pfam PF13416 Bacterial extracellular solute-binding protein 43 352 3.0E-39 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein D934_11790 fe48d0b598cdadb7f9c91b6034a266b3 758 SUPERFAMILY SSF52833 653 753 9.92E-12 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_11790 fe48d0b598cdadb7f9c91b6034a266b3 758 Pfam PF13899 Thioredoxin-like 656 733 2.9E-13 T 15-10-2018 D934_11790 fe48d0b598cdadb7f9c91b6034a266b3 758 Pfam PF11412 Disulphide bond corrector protein DsbC 184 300 8.0E-28 T 15-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain D934_11790 fe48d0b598cdadb7f9c91b6034a266b3 758 Pfam PF11412 Disulphide bond corrector protein DsbC 26 143 4.2E-29 T 15-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain D934_11790 fe48d0b598cdadb7f9c91b6034a266b3 758 SUPERFAMILY SSF74863 184 301 1.83E-29 T 15-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily D934_11790 fe48d0b598cdadb7f9c91b6034a266b3 758 SUPERFAMILY SSF74863 24 143 1.57E-30 T 15-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily D934_11790 fe48d0b598cdadb7f9c91b6034a266b3 758 Gene3D G3DSA:3.40.30.10 651 754 1.1E-10 T 15-10-2018 D934_11790 fe48d0b598cdadb7f9c91b6034a266b3 758 Gene3D G3DSA:2.60.40.1250 20 155 8.1E-35 T 15-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily D934_11790 fe48d0b598cdadb7f9c91b6034a266b3 758 Gene3D G3DSA:2.60.40.1250 179 318 5.2E-33 T 15-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily D934_11790 fe48d0b598cdadb7f9c91b6034a266b3 758 ProSitePatterns PS00194 Thioredoxin family active site. 666 684 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 D934_10675 81b0736a4829d8b83f8761378824329f 209 PIRSF PIRSF000847 1 196 3.7E-44 T 15-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 D934_10675 81b0736a4829d8b83f8761378824329f 209 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 D934_10675 81b0736a4829d8b83f8761378824329f 209 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 3.5E-16 T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 D934_10675 81b0736a4829d8b83f8761378824329f 209 Gene3D G3DSA:1.20.120.1760 2 178 1.8E-13 T 15-10-2018 D934_10675 81b0736a4829d8b83f8761378824329f 209 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 191 3.1E-51 T 15-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 D934_08090 00cff3b3281b2f24e1cc1536b62becdd 639 Gene3D G3DSA:1.10.10.1020 1 110 1.4E-5 T 15-10-2018 D934_08090 00cff3b3281b2f24e1cc1536b62becdd 639 Pfam PF13245 AAA domain 159 313 4.6E-30 T 15-10-2018 D934_08090 00cff3b3281b2f24e1cc1536b62becdd 639 SUPERFAMILY SSF52540 4 324 5.19E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08090 00cff3b3281b2f24e1cc1536b62becdd 639 SUPERFAMILY SSF52540 290 609 2.3E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08090 00cff3b3281b2f24e1cc1536b62becdd 639 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 13 608 45.615 T 15-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 D934_08090 00cff3b3281b2f24e1cc1536b62becdd 639 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 4 610 5.0E-198 T 15-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 D934_08090 00cff3b3281b2f24e1cc1536b62becdd 639 Pfam PF13538 UvrD-like helicase C-terminal domain 539 585 3.2E-14 T 15-10-2018 IPR027785 UvrD-like helicase C-terminal domain D934_08090 00cff3b3281b2f24e1cc1536b62becdd 639 Gene3D G3DSA:3.40.50.300 111 350 2.5E-57 T 15-10-2018 D934_08090 00cff3b3281b2f24e1cc1536b62becdd 639 Gene3D G3DSA:3.40.50.300 487 599 2.4E-23 T 15-10-2018 D934_08090 00cff3b3281b2f24e1cc1536b62becdd 639 Gene3D G3DSA:3.40.50.300 380 481 3.6E-7 T 15-10-2018 D934_06945 4fa350fab6840d5e5128fcf79ebb27f6 259 SUPERFAMILY SSF53901 33 190 9.0E-13 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_06945 4fa350fab6840d5e5128fcf79ebb27f6 259 Gene3D G3DSA:3.40.47.10 4 208 5.3E-7 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 D934_06945 4fa350fab6840d5e5128fcf79ebb27f6 259 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 35 194 7.0E-25 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D934_01330 bd272c65ceff39a05a12d0b85da7d1aa 94 Gene3D G3DSA:2.60.260.40 38 92 5.2E-10 T 15-10-2018 D934_01330 bd272c65ceff39a05a12d0b85da7d1aa 94 Pfam PF10276 Zinc-finger domain 65 90 1.1E-7 T 15-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_12855 7fc8ba4e7c5f66ec9205ead60080a9fd 337 Gene3D G3DSA:3.20.20.370 99 326 4.0E-55 T 15-10-2018 D934_12855 7fc8ba4e7c5f66ec9205ead60080a9fd 337 SUPERFAMILY SSF88713 120 313 4.45E-41 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D934_12855 7fc8ba4e7c5f66ec9205ead60080a9fd 337 Pfam PF01522 Polysaccharide deacetylase 155 292 1.1E-31 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 D934_09965 6f917ac4c89716fc1f8d2dce701ee39d 183 Gene3D G3DSA:3.90.79.10 10 179 1.6E-33 T 15-10-2018 D934_09965 6f917ac4c89716fc1f8d2dce701ee39d 183 SUPERFAMILY SSF55811 16 171 1.19E-28 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D934_09965 6f917ac4c89716fc1f8d2dce701ee39d 183 ProSitePatterns PS00893 Nudix box signature. 72 93 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D934_09965 6f917ac4c89716fc1f8d2dce701ee39d 183 Pfam PF00293 NUDIX domain 36 101 3.1E-10 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D934_13755 99b3e927a5f43bc72263142f7f592e1e 92 PIRSF PIRSF003108 1 90 2.0E-28 T 15-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 D934_13755 99b3e927a5f43bc72263142f7f592e1e 92 Gene3D G3DSA:1.10.1220.10 4 86 7.9E-14 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 D934_13755 99b3e927a5f43bc72263142f7f592e1e 92 Pfam PF04221 RelB antitoxin 4 69 2.8E-18 T 15-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ D934_13755 99b3e927a5f43bc72263142f7f592e1e 92 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 86 8.6E-23 T 15-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ D934_05240 e2ad2e2c7c396178b1917315de87ee12 252 Pfam PF00717 Peptidase S24-like 155 217 5.6E-9 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D934_05240 e2ad2e2c7c396178b1917315de87ee12 252 SUPERFAMILY SSF51306 113 244 3.79E-21 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily D934_05240 e2ad2e2c7c396178b1917315de87ee12 252 Gene3D G3DSA:2.10.109.10 115 247 8.0E-11 T 15-10-2018 D934_07845 3731af0818deed185c9c3f9c1f6d0b85 480 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 1 170 7.9E-35 T 15-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal D934_07845 3731af0818deed185c9c3f9c1f6d0b85 480 Pfam PF09356 Phage conserved hypothetical protein BR0599 396 468 1.9E-9 T 15-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal D934_09065 3731af0818deed185c9c3f9c1f6d0b85 480 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 1 170 7.9E-35 T 15-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal D934_09065 3731af0818deed185c9c3f9c1f6d0b85 480 Pfam PF09356 Phage conserved hypothetical protein BR0599 396 468 1.9E-9 T 15-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal D934_07370 a9d793defc543df1a207afe40c95f036 116 Pfam PF01230 HIT domain 14 110 3.5E-23 T 15-10-2018 IPR001310 Histidine triad (HIT) protein D934_07370 a9d793defc543df1a207afe40c95f036 116 PRINTS PR00332 Histidine triad family signature 8 24 2.4E-19 T 15-10-2018 IPR001310 Histidine triad (HIT) protein D934_07370 a9d793defc543df1a207afe40c95f036 116 PRINTS PR00332 Histidine triad family signature 29 47 2.4E-19 T 15-10-2018 IPR001310 Histidine triad (HIT) protein D934_07370 a9d793defc543df1a207afe40c95f036 116 PRINTS PR00332 Histidine triad family signature 98 108 2.4E-19 T 15-10-2018 IPR001310 Histidine triad (HIT) protein D934_07370 a9d793defc543df1a207afe40c95f036 116 ProSitePatterns PS00892 HIT domain signature. 91 109 - T 15-10-2018 IPR019808 Histidine triad, conserved site D934_07370 a9d793defc543df1a207afe40c95f036 116 SUPERFAMILY SSF54197 3 114 1.7E-33 T 15-10-2018 IPR036265 HIT-like superfamily D934_07370 a9d793defc543df1a207afe40c95f036 116 Gene3D G3DSA:3.30.428.10 1 113 3.9E-32 T 15-10-2018 IPR036265 HIT-like superfamily D934_08695 7df367989043397808ed3400e2a4bb3b 157 Gene3D G3DSA:3.40.1280.10 1 156 4.0E-49 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D934_08695 7df367989043397808ed3400e2a4bb3b 157 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 3 155 9.2E-50 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 D934_08695 7df367989043397808ed3400e2a4bb3b 157 PIRSF PIRSF004505 1 155 1.1E-47 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 D934_08695 7df367989043397808ed3400e2a4bb3b 157 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.5E-47 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 D934_08695 7df367989043397808ed3400e2a4bb3b 157 SUPERFAMILY SSF75217 1 154 1.44E-48 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases D934_08695 7df367989043397808ed3400e2a4bb3b 157 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.503 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 D934_11040 220076b30d48284f89220250de775cbe 510 Pfam PF13440 Polysaccharide biosynthesis protein 44 335 2.7E-81 T 15-10-2018 D934_05960 b7db5942b7856ddbe3c2dd3cfd16cf3e 241 Gene3D G3DSA:1.10.10.880 16 83 9.8E-8 T 15-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 D934_05960 b7db5942b7856ddbe3c2dd3cfd16cf3e 241 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 19 88 4.1E-8 T 15-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 D934_05960 b7db5942b7856ddbe3c2dd3cfd16cf3e 241 SUPERFAMILY SSF89069 16 83 8.24E-13 T 15-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 D934_13600 147637d433be093f1fabc9cc37346985 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.175 T 15-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 D934_13600 147637d433be093f1fabc9cc37346985 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 4.5E-194 T 15-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 D934_13600 147637d433be093f1fabc9cc37346985 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 5.1E-10 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 D934_13600 147637d433be093f1fabc9cc37346985 466 SUPERFAMILY SSF50249 15 102 1.89E-16 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_13600 147637d433be093f1fabc9cc37346985 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.2E-13 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_13600 147637d433be093f1fabc9cc37346985 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.2E-13 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_13600 147637d433be093f1fabc9cc37346985 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.2E-13 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_13600 147637d433be093f1fabc9cc37346985 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.2E-13 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_13600 147637d433be093f1fabc9cc37346985 466 Gene3D G3DSA:2.40.50.140 2 105 3.4E-18 T 15-10-2018 D934_13600 147637d433be093f1fabc9cc37346985 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 459 4.7E-82 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_13600 147637d433be093f1fabc9cc37346985 466 Gene3D G3DSA:3.30.930.10 108 465 1.4E-107 T 15-10-2018 D934_13600 147637d433be093f1fabc9cc37346985 466 SUPERFAMILY SSF55681 98 464 5.19E-94 T 15-10-2018 D934_06130 c97eaa0f96220b53a3d5a22547bd888a 310 Gene3D G3DSA:1.10.10.2830 121 234 4.1E-35 T 15-10-2018 D934_06130 c97eaa0f96220b53a3d5a22547bd888a 310 SMART SM00470 44 134 7.2E-37 T 15-10-2018 IPR003115 ParB/Sulfiredoxin D934_06130 c97eaa0f96220b53a3d5a22547bd888a 310 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 42 218 7.9E-58 T 15-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 D934_06130 c97eaa0f96220b53a3d5a22547bd888a 310 Pfam PF02195 ParB-like nuclease domain 47 134 1.9E-28 T 15-10-2018 IPR003115 ParB/Sulfiredoxin D934_06130 c97eaa0f96220b53a3d5a22547bd888a 310 Gene3D G3DSA:3.90.1530.30 57 120 1.2E-27 T 15-10-2018 D934_06130 c97eaa0f96220b53a3d5a22547bd888a 310 SUPERFAMILY SSF110849 44 178 3.09E-32 T 15-10-2018 IPR036086 ParB/Sulfiredoxin superfamily D934_01170 739415c0275ab269302ed281db7531b6 299 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 20 297 9.1E-114 T 15-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 D934_01170 739415c0275ab269302ed281db7531b6 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 77 99 - T 15-10-2018 IPR030470 UbiA prenyltransferase conserved site D934_01170 739415c0275ab269302ed281db7531b6 299 Gene3D G3DSA:1.10.357.140 34 178 3.0E-38 T 15-10-2018 D934_01170 739415c0275ab269302ed281db7531b6 299 Gene3D G3DSA:1.20.120.1780 179 299 1.0E-9 T 15-10-2018 D934_01170 739415c0275ab269302ed281db7531b6 299 Pfam PF01040 UbiA prenyltransferase family 38 280 6.8E-59 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 D934_01170 739415c0275ab269302ed281db7531b6 299 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 15 298 28.697 T 15-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 D934_11860 7ca74b98668743ebdadd2e9bf0e68db7 73 Gene3D G3DSA:1.20.58.660 2 72 4.0E-6 T 15-10-2018 D934_11860 7ca74b98668743ebdadd2e9bf0e68db7 73 Pfam PF04325 Protein of unknown function (DUF465) 21 61 1.4E-8 T 15-10-2018 IPR007420 Protein of unknown function DUF465 D934_08890 1f0d64c9e7b03abb601ce0d0eba92053 178 SUPERFAMILY SSF54523 29 168 1.52E-18 T 15-10-2018 D934_08890 1f0d64c9e7b03abb601ce0d0eba92053 178 Gene3D G3DSA:3.30.700.10 8 169 5.8E-18 T 15-10-2018 D934_08890 1f0d64c9e7b03abb601ce0d0eba92053 178 Pfam PF00114 Pilin (bacterial filament) 36 167 9.4E-27 T 15-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 D934_06375 bf00402a887d5e8a67e9b661081ea463 91 Pfam PF01381 Helix-turn-helix 15 64 2.1E-9 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_06375 bf00402a887d5e8a67e9b661081ea463 91 SMART SM00530 13 66 9.5E-8 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_06375 bf00402a887d5e8a67e9b661081ea463 91 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 4 80 1.8E-28 T 15-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 D934_06375 bf00402a887d5e8a67e9b661081ea463 91 Gene3D G3DSA:1.10.260.40 1 90 8.4E-29 T 15-10-2018 D934_06375 bf00402a887d5e8a67e9b661081ea463 91 SUPERFAMILY SSF47413 9 88 9.6E-22 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_09445 9d35f305129c35accf62a544ccd1b3e7 439 Gene3D G3DSA:2.120.10.30 168 439 1.2E-85 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D934_09445 9d35f305129c35accf62a544ccd1b3e7 439 Gene3D G3DSA:3.40.50.10070 24 167 3.4E-39 T 15-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 D934_09445 9d35f305129c35accf62a544ccd1b3e7 439 SUPERFAMILY SSF69304 159 434 3.4E-50 T 15-10-2018 D934_09445 9d35f305129c35accf62a544ccd1b3e7 439 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 21 433 1.3E-157 T 15-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 D934_09445 9d35f305129c35accf62a544ccd1b3e7 439 SUPERFAMILY SSF52964 33 164 4.97E-35 T 15-10-2018 D934_09445 9d35f305129c35accf62a544ccd1b3e7 439 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 8 432 47.668 T 15-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 D934_09445 9d35f305129c35accf62a544ccd1b3e7 439 Pfam PF04052 TolB amino-terminal domain 27 132 5.3E-29 T 15-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 D934_09445 9d35f305129c35accf62a544ccd1b3e7 439 Pfam PF07676 WD40-like Beta Propeller Repeat 208 232 1.2E-6 T 15-10-2018 IPR011659 WD40-like Beta Propeller D934_09445 9d35f305129c35accf62a544ccd1b3e7 439 Pfam PF07676 WD40-like Beta Propeller Repeat 243 276 9.8E-6 T 15-10-2018 IPR011659 WD40-like Beta Propeller D934_09445 9d35f305129c35accf62a544ccd1b3e7 439 Pfam PF07676 WD40-like Beta Propeller Repeat 286 319 1.5E-14 T 15-10-2018 IPR011659 WD40-like Beta Propeller D934_10390 9df552ad84229c899246e89a5d3455f2 429 SUPERFAMILY SSF48256 9 427 1.23E-160 T 15-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 D934_10390 9df552ad84229c899246e89a5d3455f2 429 Gene3D G3DSA:1.10.230.10 269 379 1.2E-143 T 15-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain D934_10390 9df552ad84229c899246e89a5d3455f2 429 ProSitePatterns PS00480 Citrate synthase signature. 306 318 - T 15-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 D934_10390 9df552ad84229c899246e89a5d3455f2 429 PIRSF PIRSF001369 38 429 7.0E-160 T 15-10-2018 IPR024176 Citrate synthase, bacterial-type D934_10390 9df552ad84229c899246e89a5d3455f2 429 PRINTS PR00143 Citrate synthase signature 362 378 4.2E-53 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 D934_10390 9df552ad84229c899246e89a5d3455f2 429 PRINTS PR00143 Citrate synthase signature 382 396 4.2E-53 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 D934_10390 9df552ad84229c899246e89a5d3455f2 429 PRINTS PR00143 Citrate synthase signature 166 179 4.2E-53 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 D934_10390 9df552ad84229c899246e89a5d3455f2 429 PRINTS PR00143 Citrate synthase signature 299 319 4.2E-53 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 D934_10390 9df552ad84229c899246e89a5d3455f2 429 PRINTS PR00143 Citrate synthase signature 220 235 4.2E-53 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 D934_10390 9df552ad84229c899246e89a5d3455f2 429 PRINTS PR00143 Citrate synthase signature 242 270 4.2E-53 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 D934_10390 9df552ad84229c899246e89a5d3455f2 429 Pfam PF00285 Citrate synthase, C-terminal domain 47 414 5.2E-134 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 D934_10390 9df552ad84229c899246e89a5d3455f2 429 Gene3D G3DSA:1.10.580.10 58 414 1.2E-143 T 15-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 D934_10390 9df552ad84229c899246e89a5d3455f2 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 425 2.6E-201 T 15-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 D934_10390 9df552ad84229c899246e89a5d3455f2 429 Gene3D G3DSA:2.20.28.60 5 51 1.4E-14 T 15-10-2018 D934_01270 42e002d04c3f50a86d8b0fd2f8a357d5 162 Gene3D G3DSA:3.90.950.20 1 162 4.7E-58 T 15-10-2018 IPR036653 CinA-like, C-terminal D934_01270 42e002d04c3f50a86d8b0fd2f8a357d5 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 159 4.2E-47 T 15-10-2018 IPR008136 CinA, C-terminal D934_01270 42e002d04c3f50a86d8b0fd2f8a357d5 162 SUPERFAMILY SSF142433 5 160 5.23E-52 T 15-10-2018 IPR036653 CinA-like, C-terminal D934_01270 42e002d04c3f50a86d8b0fd2f8a357d5 162 Pfam PF02464 Competence-damaged protein 9 160 8.0E-54 T 15-10-2018 IPR008136 CinA, C-terminal D934_02350 3e5b4a74acb6e6f132f67e211a2a9920 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 19.865 T 15-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 D934_02350 3e5b4a74acb6e6f132f67e211a2a9920 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 6.7E-23 T 15-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like D934_01115 0d82128715e0449a78f1d3bc256d59da 728 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 1.2E-65 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 D934_01115 0d82128715e0449a78f1d3bc256d59da 728 Gene3D G3DSA:1.10.10.160 114 188 4.5E-92 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily D934_01115 0d82128715e0449a78f1d3bc256d59da 728 Gene3D G3DSA:1.10.486.10 383 544 1.4E-121 T 15-10-2018 D934_01115 0d82128715e0449a78f1d3bc256d59da 728 Pfam PF13361 UvrD-like helicase C-terminal domain 278 622 7.3E-75 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 D934_01115 0d82128715e0449a78f1d3bc256d59da 728 SUPERFAMILY SSF52540 7 648 1.19E-172 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_01115 0d82128715e0449a78f1d3bc256d59da 728 Gene3D G3DSA:3.40.50.300 10 274 4.5E-92 T 15-10-2018 D934_01115 0d82128715e0449a78f1d3bc256d59da 728 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 726 0.0 T 15-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 D934_01115 0d82128715e0449a78f1d3bc256d59da 728 Gene3D G3DSA:3.40.50.300 282 642 1.4E-121 T 15-10-2018 D934_12590 c11b77c8ffc73ad8db6164f53aa33c5a 690 Pfam PF14559 Tetratricopeptide repeat 146 211 8.8E-7 T 15-10-2018 D934_12590 c11b77c8ffc73ad8db6164f53aa33c5a 690 SMART SM00028 134 167 39.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_12590 c11b77c8ffc73ad8db6164f53aa33c5a 690 SMART SM00028 237 270 56.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_12590 c11b77c8ffc73ad8db6164f53aa33c5a 690 SMART SM00028 202 235 15.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_12590 c11b77c8ffc73ad8db6164f53aa33c5a 690 SMART SM00028 168 201 0.002 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_12590 c11b77c8ffc73ad8db6164f53aa33c5a 690 SMART SM00028 66 99 64.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_12590 c11b77c8ffc73ad8db6164f53aa33c5a 690 SMART SM00028 271 304 250.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_12590 c11b77c8ffc73ad8db6164f53aa33c5a 690 SMART SM00028 32 65 77.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_12590 c11b77c8ffc73ad8db6164f53aa33c5a 690 SMART SM00028 100 133 430.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_12590 c11b77c8ffc73ad8db6164f53aa33c5a 690 SUPERFAMILY SSF48452 26 340 4.64E-33 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_12590 c11b77c8ffc73ad8db6164f53aa33c5a 690 Gene3D G3DSA:1.25.40.10 319 452 6.8E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_12590 c11b77c8ffc73ad8db6164f53aa33c5a 690 Gene3D G3DSA:1.25.40.10 4 315 4.2E-48 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_12590 c11b77c8ffc73ad8db6164f53aa33c5a 690 SUPERFAMILY SSF48452 236 434 4.36E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_08235 058c4c8a9b2513abb4039690c51ef79f 430 SUPERFAMILY SSF52540 4 429 3.61E-173 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08235 058c4c8a9b2513abb4039690c51ef79f 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 205.293 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D934_08235 058c4c8a9b2513abb4039690c51ef79f 430 Gene3D G3DSA:3.40.440.10 6 249 1.1E-97 T 15-10-2018 D934_08235 058c4c8a9b2513abb4039690c51ef79f 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 15-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D934_08235 058c4c8a9b2513abb4039690c51ef79f 430 SMART SM00788 4 424 1.2E-285 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D934_08235 058c4c8a9b2513abb4039690c51ef79f 430 Gene3D G3DSA:3.90.170.10 267 430 4.7E-68 T 15-10-2018 D934_08235 058c4c8a9b2513abb4039690c51ef79f 430 Gene3D G3DSA:1.10.300.10 102 201 1.1E-97 T 15-10-2018 D934_08235 058c4c8a9b2513abb4039690c51ef79f 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 15-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D934_08235 058c4c8a9b2513abb4039690c51ef79f 430 Pfam PF00709 Adenylosuccinate synthetase 5 423 3.3E-175 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D934_08235 058c4c8a9b2513abb4039690c51ef79f 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 1.5E-172 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D934_04320 63eeac163ad14b44d93bf316ac7d6724 258 Gene3D G3DSA:3.30.70.660 108 243 1.0E-44 T 15-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 D934_04320 63eeac163ad14b44d93bf316ac7d6724 258 PIRSF PIRSF001430 2 256 1.2E-65 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_04320 63eeac163ad14b44d93bf316ac7d6724 258 Gene3D G3DSA:3.30.70.580 1 107 2.6E-31 T 15-10-2018 D934_04320 63eeac163ad14b44d93bf316ac7d6724 258 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 3 246 30.54 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_04320 63eeac163ad14b44d93bf316ac7d6724 258 Pfam PF01416 tRNA pseudouridine synthase 145 246 8.3E-26 T 15-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_04320 63eeac163ad14b44d93bf316ac7d6724 258 SUPERFAMILY SSF55120 2 253 5.04E-81 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_04320 63eeac163ad14b44d93bf316ac7d6724 258 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 6 240 1.4E-56 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_05835 792598632aea90d4c4af2b2ff2e51aec 269 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 241 1.6E-75 T 15-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 D934_05835 792598632aea90d4c4af2b2ff2e51aec 269 Pfam PF00977 Histidine biosynthesis protein 5 236 3.5E-67 T 15-10-2018 IPR006062 Histidine biosynthesis GO:0000105 D934_05835 792598632aea90d4c4af2b2ff2e51aec 269 Gene3D G3DSA:3.20.20.70 4 249 4.4E-78 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_05835 792598632aea90d4c4af2b2ff2e51aec 269 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 244 31.557 T 15-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 D934_05835 792598632aea90d4c4af2b2ff2e51aec 269 SUPERFAMILY SSF51366 3 243 9.42E-61 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D934_09765 bf65c58c8bbdcca2c4102e619b611517 545 TIGRFAM TIGR00552 nadE: NAD+ synthetase 277 526 9.7E-58 T 15-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 D934_09765 bf65c58c8bbdcca2c4102e619b611517 545 Pfam PF02540 NAD synthase 270 520 1.2E-68 T 15-10-2018 IPR022310 NAD/GMP synthase D934_09765 bf65c58c8bbdcca2c4102e619b611517 545 Pfam PF00795 Carbon-nitrogen hydrolase 6 244 3.8E-25 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 D934_09765 bf65c58c8bbdcca2c4102e619b611517 545 SUPERFAMILY SSF56317 4 245 1.83E-60 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D934_09765 bf65c58c8bbdcca2c4102e619b611517 545 PIRSF PIRSF006630 2 545 4.7E-179 T 15-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 D934_09765 bf65c58c8bbdcca2c4102e619b611517 545 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 545 28.776 T 15-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 D934_09765 bf65c58c8bbdcca2c4102e619b611517 545 SUPERFAMILY SSF52402 268 528 3.53E-73 T 15-10-2018 D934_09765 bf65c58c8bbdcca2c4102e619b611517 545 Gene3D G3DSA:3.60.110.10 1 254 2.1E-83 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D934_09765 bf65c58c8bbdcca2c4102e619b611517 545 Gene3D G3DSA:3.40.50.620 267 545 3.9E-109 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_09765 bf65c58c8bbdcca2c4102e619b611517 545 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 38 53 - T 15-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 D934_00090 263a3b5577b5e40416933f0bee51031a 137 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 40 117 9.4E-20 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 D934_00090 263a3b5577b5e40416933f0bee51031a 137 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 42 118 2.2E-20 T 15-10-2018 IPR006260 TonB/TolA, C-terminal D934_00090 263a3b5577b5e40416933f0bee51031a 137 Gene3D G3DSA:3.30.1150.10 19 117 2.2E-22 T 15-10-2018 D934_00090 263a3b5577b5e40416933f0bee51031a 137 SUPERFAMILY SSF74653 35 116 4.32E-20 T 15-10-2018 D934_09000 91c249d959cee8914f17935a39af1b42 771 SUPERFAMILY SSF52096 32 209 1.85E-37 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D934_09000 91c249d959cee8914f17935a39af1b42 771 PRINTS PR00127 Clp protease catalytic subunit P signature 184 203 1.1E-7 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D934_09000 91c249d959cee8914f17935a39af1b42 771 PRINTS PR00127 Clp protease catalytic subunit P signature 126 145 1.1E-7 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D934_09000 91c249d959cee8914f17935a39af1b42 771 PRINTS PR00127 Clp protease catalytic subunit P signature 76 96 1.1E-7 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D934_09000 91c249d959cee8914f17935a39af1b42 771 Pfam PF00574 Clp protease 62 207 2.7E-25 T 15-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA D934_09000 91c249d959cee8914f17935a39af1b42 771 Gene3D G3DSA:3.90.226.10 31 215 9.2E-41 T 15-10-2018 D934_07780 91c249d959cee8914f17935a39af1b42 771 SUPERFAMILY SSF52096 32 209 1.85E-37 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D934_07780 91c249d959cee8914f17935a39af1b42 771 PRINTS PR00127 Clp protease catalytic subunit P signature 184 203 1.1E-7 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D934_07780 91c249d959cee8914f17935a39af1b42 771 PRINTS PR00127 Clp protease catalytic subunit P signature 126 145 1.1E-7 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D934_07780 91c249d959cee8914f17935a39af1b42 771 PRINTS PR00127 Clp protease catalytic subunit P signature 76 96 1.1E-7 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D934_07780 91c249d959cee8914f17935a39af1b42 771 Pfam PF00574 Clp protease 62 207 2.7E-25 T 15-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA D934_07780 91c249d959cee8914f17935a39af1b42 771 Gene3D G3DSA:3.90.226.10 31 215 9.2E-41 T 15-10-2018 D934_03720 28294bfb0467dd16977ff7eb1832fd7b 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 18 255 5.2E-51 T 15-10-2018 D934_03720 28294bfb0467dd16977ff7eb1832fd7b 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 11 294 2.2E-125 T 15-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 D934_03720 28294bfb0467dd16977ff7eb1832fd7b 298 ProSitePatterns PS00161 Isocitrate lyase signature. 125 130 - T 15-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 D934_03720 28294bfb0467dd16977ff7eb1832fd7b 298 SUPERFAMILY SSF51621 7 293 5.83E-98 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D934_03720 28294bfb0467dd16977ff7eb1832fd7b 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 8 296 48.634 T 15-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 D934_03720 28294bfb0467dd16977ff7eb1832fd7b 298 Gene3D G3DSA:3.20.20.60 8 298 2.2E-100 T 15-10-2018 D934_10370 8ca0b6fe4d4903a69b5f6d197cf14991 264 Pfam PF02675 S-adenosylmethionine decarboxylase 43 170 8.4E-31 T 15-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 D934_10370 8ca0b6fe4d4903a69b5f6d197cf14991 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 153.661 T 15-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 D934_10370 8ca0b6fe4d4903a69b5f6d197cf14991 264 PIRSF PIRSF001356 2 264 2.3E-147 T 15-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 D934_10370 8ca0b6fe4d4903a69b5f6d197cf14991 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 262 3.9E-142 T 15-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 D934_10370 8ca0b6fe4d4903a69b5f6d197cf14991 264 Gene3D G3DSA:3.60.90.10 103 187 9.6E-7 T 15-10-2018 D934_10370 8ca0b6fe4d4903a69b5f6d197cf14991 264 Gene3D G3DSA:3.30.360.110 43 88 3.1E-5 T 15-10-2018 D934_10370 8ca0b6fe4d4903a69b5f6d197cf14991 264 SUPERFAMILY SSF56276 47 175 1.88E-24 T 15-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 D934_01350 5e47443e1eeab32d25b4bc88d4eb1eb7 448 Gene3D G3DSA:3.40.50.2000 242 423 2.2E-62 T 15-10-2018 D934_01350 5e47443e1eeab32d25b4bc88d4eb1eb7 448 SUPERFAMILY SSF53756 77 422 1.54E-14 T 15-10-2018 D934_01350 5e47443e1eeab32d25b4bc88d4eb1eb7 448 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 54 231 2.0E-62 T 15-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 D934_01350 5e47443e1eeab32d25b4bc88d4eb1eb7 448 Gene3D G3DSA:3.40.50.11720 52 229 4.0E-45 T 15-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 D934_01650 e24529b62f68b48aa4d01125d0ca7261 418 Gene3D G3DSA:1.10.240.10 218 329 1.1E-23 T 15-10-2018 D934_01650 e24529b62f68b48aa4d01125d0ca7261 418 Gene3D G3DSA:3.40.50.620 5 217 1.6E-72 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_01650 e24529b62f68b48aa4d01125d0ca7261 418 SUPERFAMILY SSF52374 9 316 1.22E-86 T 15-10-2018 D934_01650 e24529b62f68b48aa4d01125d0ca7261 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 10 399 1.4E-107 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D934_01650 e24529b62f68b48aa4d01125d0ca7261 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_01650 e24529b62f68b48aa4d01125d0ca7261 418 SMART SM00363 339 401 0.0039 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_01650 e24529b62f68b48aa4d01125d0ca7261 418 Pfam PF00579 tRNA synthetases class I (W and Y) 31 315 9.9E-69 T 15-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_01650 e24529b62f68b48aa4d01125d0ca7261 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 9.9E-25 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D934_01650 e24529b62f68b48aa4d01125d0ca7261 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 9.9E-25 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D934_01650 e24529b62f68b48aa4d01125d0ca7261 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 9.9E-25 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D934_01650 e24529b62f68b48aa4d01125d0ca7261 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 9.9E-25 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D934_01650 e24529b62f68b48aa4d01125d0ca7261 418 SUPERFAMILY SSF55174 333 400 4.27E-14 T 15-10-2018 D934_01650 e24529b62f68b48aa4d01125d0ca7261 418 Gene3D G3DSA:3.10.290.10 330 400 3.4E-16 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D934_01650 e24529b62f68b48aa4d01125d0ca7261 418 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 400 44.55 T 15-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 D934_12135 2d91a251cadcc45ff9defdeee15aba6c 171 Pfam PF05136 Phage portal protein, lambda family 51 149 7.1E-15 T 15-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 D934_13160 f58660ae8fff495f8511d1fbc1839d0f 278 Gene3D G3DSA:3.10.20.310 33 103 4.5E-21 T 15-10-2018 D934_13160 f58660ae8fff495f8511d1fbc1839d0f 278 Pfam PF08478 POTRA domain, FtsQ-type 35 103 1.9E-16 T 15-10-2018 IPR013685 POTRA domain, FtsQ-type D934_13160 f58660ae8fff495f8511d1fbc1839d0f 278 Pfam PF03799 Cell division protein FtsQ 108 219 5.6E-18 T 15-10-2018 IPR005548 Cell division protein FtsQ/DivIB D934_13160 f58660ae8fff495f8511d1fbc1839d0f 278 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 4 227 22.303 T 15-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 D934_13160 f58660ae8fff495f8511d1fbc1839d0f 278 Gene3D G3DSA:3.40.50.11690 104 231 2.7E-32 T 15-10-2018 D934_00155 47a8b4c036edaa2330e2ea0ec072a05c 690 SUPERFAMILY SSF55073 275 433 6.51E-19 T 15-10-2018 IPR029787 Nucleotide cyclase D934_00155 47a8b4c036edaa2330e2ea0ec072a05c 690 SUPERFAMILY SSF52172 8 164 1.75E-7 T 15-10-2018 IPR011006 CheY-like superfamily D934_00155 47a8b4c036edaa2330e2ea0ec072a05c 690 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 426 1.5E-13 T 15-10-2018 IPR000160 GGDEF domain D934_00155 47a8b4c036edaa2330e2ea0ec072a05c 690 SMART SM00052 443 690 4.0E-23 T 15-10-2018 IPR001633 EAL domain D934_00155 47a8b4c036edaa2330e2ea0ec072a05c 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 250 1.5E-8 T 15-10-2018 IPR000014 PAS domain D934_00155 47a8b4c036edaa2330e2ea0ec072a05c 690 Gene3D G3DSA:3.20.20.450 432 690 1.9E-61 T 15-10-2018 IPR035919 EAL domain superfamily D934_00155 47a8b4c036edaa2330e2ea0ec072a05c 690 Pfam PF13426 PAS domain 160 243 1.3E-5 T 15-10-2018 IPR000014 PAS domain D934_00155 47a8b4c036edaa2330e2ea0ec072a05c 690 Pfam PF00563 EAL domain 449 681 1.2E-48 T 15-10-2018 IPR001633 EAL domain D934_00155 47a8b4c036edaa2330e2ea0ec072a05c 690 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 429 5.9E-13 T 15-10-2018 IPR000160 GGDEF domain D934_00155 47a8b4c036edaa2330e2ea0ec072a05c 690 SUPERFAMILY SSF141868 449 680 1.7E-43 T 15-10-2018 IPR035919 EAL domain superfamily D934_00155 47a8b4c036edaa2330e2ea0ec072a05c 690 SUPERFAMILY SSF55785 132 251 2.86E-13 T 15-10-2018 IPR035965 PAS domain superfamily D934_00155 47a8b4c036edaa2330e2ea0ec072a05c 690 SMART SM00267 258 431 1.3E-7 T 15-10-2018 IPR000160 GGDEF domain D934_00155 47a8b4c036edaa2330e2ea0ec072a05c 690 Gene3D G3DSA:3.30.450.20 131 253 5.5E-14 T 15-10-2018 D934_00155 47a8b4c036edaa2330e2ea0ec072a05c 690 Gene3D G3DSA:3.30.70.270 259 431 1.6E-25 T 15-10-2018 D934_00525 e452d98f84f68d64d9519601e871394a 284 PIRSF PIRSF000193 10 278 1.3E-72 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 D934_00525 e452d98f84f68d64d9519601e871394a 284 Gene3D G3DSA:3.40.50.720 11 172 6.9E-45 T 15-10-2018 D934_00525 e452d98f84f68d64d9519601e871394a 284 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 13 107 8.7E-16 T 15-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal D934_00525 e452d98f84f68d64d9519601e871394a 284 SUPERFAMILY SSF48179 170 277 6.46E-34 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D934_00525 e452d98f84f68d64d9519601e871394a 284 SUPERFAMILY SSF51735 13 168 3.12E-31 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_00525 e452d98f84f68d64d9519601e871394a 284 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 13 275 7.8E-88 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 D934_00525 e452d98f84f68d64d9519601e871394a 284 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 11 275 25.999 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 D934_00525 e452d98f84f68d64d9519601e871394a 284 Gene3D G3DSA:1.10.3730.10 173 279 1.6E-38 T 15-10-2018 D934_00525 e452d98f84f68d64d9519601e871394a 284 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 171 275 4.6E-34 T 15-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 D934_03070 d40c8dba1b7f5892f0b5a44af7252e00 191 SUPERFAMILY SSF48317 133 186 1.31E-6 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily D934_09525 f654686b6514e4bb7a41f06e55d33ec4 274 PIRSF PIRSF005902 1 264 1.8E-71 T 15-10-2018 IPR001130 TatD family GO:0016788 D934_09525 f654686b6514e4bb7a41f06e55d33ec4 274 Pfam PF01026 TatD related DNase 4 260 3.9E-67 T 15-10-2018 IPR001130 TatD family GO:0016788 D934_09525 f654686b6514e4bb7a41f06e55d33ec4 274 SUPERFAMILY SSF51556 3 261 1.23E-80 T 15-10-2018 IPR032466 Metal-dependent hydrolase D934_09525 f654686b6514e4bb7a41f06e55d33ec4 274 Gene3D G3DSA:3.20.20.140 1 266 1.9E-93 T 15-10-2018 D934_09525 f654686b6514e4bb7a41f06e55d33ec4 274 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 D934_09455 e2abfe57d9d045637df762f6e81c453b 145 Gene3D G3DSA:3.30.420.270 58 132 1.3E-10 T 15-10-2018 D934_09455 e2abfe57d9d045637df762f6e81c453b 145 TIGRFAM TIGR02801 tolR: protein TolR 13 139 3.8E-39 T 15-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 D934_09455 e2abfe57d9d045637df762f6e81c453b 145 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 140 1.9E-24 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 D934_09455 e2abfe57d9d045637df762f6e81c453b 145 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 6 139 26.993 T 15-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 D934_07215 4ca885e5f034441ac202e4f535b4352b 261 PIRSF PIRSF004848 17 255 1.0E-67 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 D934_07215 4ca885e5f034441ac202e4f535b4352b 261 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 23 250 3.8E-58 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 D934_07215 4ca885e5f034441ac202e4f535b4352b 261 SUPERFAMILY SSF51419 18 248 4.19E-72 T 15-10-2018 IPR029066 PLP-binding barrel D934_07215 4ca885e5f034441ac202e4f535b4352b 261 Gene3D G3DSA:3.20.20.10 7 260 3.3E-82 T 15-10-2018 IPR029066 PLP-binding barrel D934_07215 4ca885e5f034441ac202e4f535b4352b 261 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 26 249 27.956 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 D934_07215 4ca885e5f034441ac202e4f535b4352b 261 Pfam PF01168 Alanine racemase, N-terminal domain 48 250 3.6E-21 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D934_12840 ca113a619569d2dbcf9a544ee9189ef0 202 SUPERFAMILY SSF55166 73 199 1.15E-24 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D934_12840 ca113a619569d2dbcf9a544ee9189ef0 202 Gene3D G3DSA:3.30.1380.10 46 202 8.6E-37 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D934_12840 ca113a619569d2dbcf9a544ee9189ef0 202 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 77 201 5.7E-38 T 15-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 D934_10395 5b50075dfd56c7052aeeff80aba1fa2d 80 PRINTS PR01249 Ribosomal protein L31 signature 60 78 2.3E-18 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_10395 5b50075dfd56c7052aeeff80aba1fa2d 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.3E-18 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_10395 5b50075dfd56c7052aeeff80aba1fa2d 80 PRINTS PR01249 Ribosomal protein L31 signature 45 60 2.3E-18 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_10395 5b50075dfd56c7052aeeff80aba1fa2d 80 Pfam PF01197 Ribosomal protein L31 1 79 1.1E-29 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_10395 5b50075dfd56c7052aeeff80aba1fa2d 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.2E-20 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_10395 5b50075dfd56c7052aeeff80aba1fa2d 80 SUPERFAMILY SSF143800 1 79 7.06E-23 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_10395 5b50075dfd56c7052aeeff80aba1fa2d 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_10395 5b50075dfd56c7052aeeff80aba1fa2d 80 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 25.028 T 15-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_10395 5b50075dfd56c7052aeeff80aba1fa2d 80 Gene3D G3DSA:2.30.170.50 1 80 1.4E-25 T 15-10-2018 D934_00470 fcc2a06c5d86cf17d82011c02d594934 113 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.0E-34 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 D934_00470 fcc2a06c5d86cf17d82011c02d594934 113 SUPERFAMILY SSF52833 3 109 4.98E-36 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_00470 fcc2a06c5d86cf17d82011c02d594934 113 Pfam PF00085 Thioredoxin 5 106 1.2E-28 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 D934_00470 fcc2a06c5d86cf17d82011c02d594934 113 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 D934_00470 fcc2a06c5d86cf17d82011c02d594934 113 PRINTS PR00421 Thioredoxin family signature 72 83 7.9E-6 T 15-10-2018 D934_00470 fcc2a06c5d86cf17d82011c02d594934 113 PRINTS PR00421 Thioredoxin family signature 32 41 7.9E-6 T 15-10-2018 D934_00470 fcc2a06c5d86cf17d82011c02d594934 113 PRINTS PR00421 Thioredoxin family signature 24 32 7.9E-6 T 15-10-2018 D934_00470 fcc2a06c5d86cf17d82011c02d594934 113 PIRSF PIRSF000077 2 108 1.9E-37 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 D934_00470 fcc2a06c5d86cf17d82011c02d594934 113 Gene3D G3DSA:3.40.30.10 4 112 4.1E-31 T 15-10-2018 D934_09685 6476e3b5135ad6f4fcf111b04bbf21aa 145 Pfam PF06903 VirK protein 29 124 1.1E-29 T 15-10-2018 IPR010694 Uncharacterised protein family VirK D934_07075 cee82c4d1b023ab656dc68fa44b8e131 188 SMART SM01040 14 99 1.3E-37 T 15-10-2018 IPR003497 BRO N-terminal domain D934_07075 cee82c4d1b023ab656dc68fa44b8e131 188 Pfam PF02498 BRO family, N-terminal domain 15 99 4.7E-23 T 15-10-2018 IPR003497 BRO N-terminal domain D934_03355 9bca566911ad205c1b9b761d52a3c845 140 Gene3D G3DSA:3.90.1170.10 4 140 3.7E-55 T 15-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 D934_03355 9bca566911ad205c1b9b761d52a3c845 140 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 4 137 35.985 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03355 9bca566911ad205c1b9b761d52a3c845 140 SUPERFAMILY SSF54686 4 137 4.19E-53 T 15-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 D934_03355 9bca566911ad205c1b9b761d52a3c845 140 Pfam PF00252 Ribosomal protein L16p/L10e 7 135 1.9E-47 T 15-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 D934_03355 9bca566911ad205c1b9b761d52a3c845 140 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 5 129 6.9E-55 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03355 9bca566911ad205c1b9b761d52a3c845 140 PRINTS PR00060 Ribosomal protein L16 signature 45 56 3.8E-38 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03355 9bca566911ad205c1b9b761d52a3c845 140 PRINTS PR00060 Ribosomal protein L16 signature 61 90 3.8E-38 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03355 9bca566911ad205c1b9b761d52a3c845 140 PRINTS PR00060 Ribosomal protein L16 signature 91 120 3.8E-38 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03355 9bca566911ad205c1b9b761d52a3c845 140 PRINTS PR00060 Ribosomal protein L16 signature 27 39 3.8E-38 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03355 9bca566911ad205c1b9b761d52a3c845 140 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 85 96 - T 15-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_00145 de52318ae21fec27b95591b4e7731096 525 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 8 507 43.191 T 15-10-2018 IPR003846 Uncharacterised protein family UPF0061 D934_00145 de52318ae21fec27b95591b4e7731096 525 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 36 491 2.1E-131 T 15-10-2018 IPR003846 Uncharacterised protein family UPF0061 D934_11940 1adecb9fad6573081757c2aad577449f 368 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 34 271 1.3E-61 T 15-10-2018 IPR018642 Protein of unknown function DUF2066 D934_12010 c3df2478bc4ec31bb414f7d5a6abb9ec 320 Gene3D G3DSA:3.40.50.1400 163 300 2.9E-88 T 15-10-2018 D934_12010 c3df2478bc4ec31bb414f7d5a6abb9ec 320 TIGRFAM TIGR00109 hemH: ferrochelatase 5 315 4.9E-89 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 D934_12010 c3df2478bc4ec31bb414f7d5a6abb9ec 320 Gene3D G3DSA:3.40.50.1400 7 318 2.9E-88 T 15-10-2018 D934_12010 c3df2478bc4ec31bb414f7d5a6abb9ec 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 319 36.149 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 D934_12010 c3df2478bc4ec31bb414f7d5a6abb9ec 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 15-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 D934_12010 c3df2478bc4ec31bb414f7d5a6abb9ec 320 SUPERFAMILY SSF53800 5 319 9.16E-94 T 15-10-2018 D934_12010 c3df2478bc4ec31bb414f7d5a6abb9ec 320 Pfam PF00762 Ferrochelatase 7 318 2.6E-101 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 D934_08700 ff28be68bda71719d6e15b7deab67b4b 927 Pfam PF00593 TonB dependent receptor 384 924 5.1E-54 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D934_08700 ff28be68bda71719d6e15b7deab67b4b 927 Gene3D G3DSA:2.170.130.10 39 179 1.5E-37 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D934_08700 ff28be68bda71719d6e15b7deab67b4b 927 SUPERFAMILY SSF56935 44 926 1.94E-101 T 15-10-2018 D934_08700 ff28be68bda71719d6e15b7deab67b4b 927 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 175 1.9E-24 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain D934_10555 7d7bddda9da9374528285a1d6613b24d 204 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 35.652 T 15-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 D934_10555 7d7bddda9da9374528285a1d6613b24d 204 Gene3D G3DSA:3.40.50.300 7 180 3.0E-64 T 15-10-2018 D934_10555 7d7bddda9da9374528285a1d6613b24d 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 15-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 D934_10555 7d7bddda9da9374528285a1d6613b24d 204 SUPERFAMILY SSF52540 2 188 2.64E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_10555 7d7bddda9da9374528285a1d6613b24d 204 SMART SM00072 2 184 5.0E-60 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit D934_10555 7d7bddda9da9374528285a1d6613b24d 204 Pfam PF00625 Guanylate kinase 4 181 1.7E-46 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit D934_10555 7d7bddda9da9374528285a1d6613b24d 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 1.1E-72 T 15-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 D934_10555 7d7bddda9da9374528285a1d6613b24d 204 Gene3D G3DSA:3.30.63.10 34 93 3.0E-64 T 15-10-2018 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 203 219 3.4E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 45 60 3.4E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 148 172 3.4E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 242 263 3.4E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 133 145 3.4E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 12 34 3.4E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 111 119 3.4E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 3.4E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 3.4E-77 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 12 317 1.4E-118 T 15-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 Gene3D G3DSA:3.50.50.60 14 316 1.6E-121 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 SUPERFAMILY SSF51905 5 317 2.96E-52 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 1.3E-39 T 15-10-2018 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 1.3E-39 T 15-10-2018 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.3E-39 T 15-10-2018 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 1.3E-39 T 15-10-2018 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 256 1.3E-39 T 15-10-2018 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 Gene3D G3DSA:3.50.50.60 122 248 1.6E-121 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 301 3.2E-45 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D934_04875 0e09178dc07e31ba9595ac5bf48f61c1 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 140 160 - T 15-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 D934_05535 bf286aab63b9534783bff0c0926de4c5 381 Pfam PF02481 DNA recombination-mediator protein A 83 284 6.0E-72 T 15-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 D934_05535 bf286aab63b9534783bff0c0926de4c5 381 Gene3D G3DSA:1.10.10.10 308 377 3.0E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_05535 bf286aab63b9534783bff0c0926de4c5 381 Gene3D G3DSA:3.40.50.450 3 297 1.3E-93 T 15-10-2018 D934_05535 bf286aab63b9534783bff0c0926de4c5 381 SUPERFAMILY SSF102405 87 291 2.08E-39 T 15-10-2018 D934_05535 bf286aab63b9534783bff0c0926de4c5 381 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 78 292 9.3E-71 T 15-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 D934_03385 479f404eb0883fb6416edbf9ec78be0b 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.3E-25 T 15-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03385 479f404eb0883fb6416edbf9ec78be0b 101 Gene3D G3DSA:4.10.830.10 41 101 1.7E-21 T 15-10-2018 D934_03385 479f404eb0883fb6416edbf9ec78be0b 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.833 T 15-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid D934_03385 479f404eb0883fb6416edbf9ec78be0b 101 SUPERFAMILY SSF57716 2 101 1.5E-35 T 15-10-2018 D934_02150 bcaabbe94c2757858405f60a46724593 219 Gene3D G3DSA:1.10.510.10 48 187 1.1E-6 T 15-10-2018 D934_02150 bcaabbe94c2757858405f60a46724593 219 Pfam PF01636 Phosphotransferase enzyme family 100 155 2.5E-5 T 15-10-2018 IPR002575 Aminoglycoside phosphotransferase D934_02150 bcaabbe94c2757858405f60a46724593 219 SUPERFAMILY SSF56112 31 149 1.61E-16 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily D934_04660 7166520d944aaa129e148d21b8f2ab6c 159 Gene3D G3DSA:3.10.580.10 1 105 1.1E-26 T 15-10-2018 D934_04660 7166520d944aaa129e148d21b8f2ab6c 159 SUPERFAMILY SSF54631 10 119 3.01E-17 T 15-10-2018 D934_05975 f32d873f579a3d2a36103cba9e51911c 264 ProSitePatterns PS00761 Signal peptidases I signature 3. 207 220 - T 15-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 D934_05975 f32d873f579a3d2a36103cba9e51911c 264 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 48 244 2.4E-44 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D934_05975 f32d873f579a3d2a36103cba9e51911c 264 Pfam PF00717 Peptidase S24-like 69 151 6.5E-21 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D934_05975 f32d873f579a3d2a36103cba9e51911c 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 202 221 6.7E-24 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D934_05975 f32d873f579a3d2a36103cba9e51911c 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 127 139 6.7E-24 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D934_05975 f32d873f579a3d2a36103cba9e51911c 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 63 79 6.7E-24 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D934_05975 f32d873f579a3d2a36103cba9e51911c 264 Gene3D G3DSA:2.170.230.10 138 201 5.4E-60 T 15-10-2018 D934_05975 f32d873f579a3d2a36103cba9e51911c 264 Gene3D G3DSA:2.10.109.10 61 244 5.4E-60 T 15-10-2018 D934_05975 f32d873f579a3d2a36103cba9e51911c 264 ProSitePatterns PS00760 Signal peptidases I lysine active site. 129 141 - T 15-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 D934_05975 f32d873f579a3d2a36103cba9e51911c 264 SUPERFAMILY SSF51306 61 249 2.88E-61 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily D934_04830 a4881e8f77115788ca072a4a6d283c22 204 Gene3D G3DSA:1.10.3890.10 2 204 5.4E-56 T 15-10-2018 IPR035932 HflD-like superfamily D934_04830 a4881e8f77115788ca072a4a6d283c22 204 Pfam PF04356 Protein of unknown function (DUF489) 7 196 8.7E-58 T 15-10-2018 IPR007451 High frequency lysogenization protein HflD D934_04830 a4881e8f77115788ca072a4a6d283c22 204 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 10 199 5.0E-104 T 15-10-2018 D934_04830 a4881e8f77115788ca072a4a6d283c22 204 SUPERFAMILY SSF101322 3 203 1.44E-59 T 15-10-2018 IPR035932 HflD-like superfamily D934_04830 a4881e8f77115788ca072a4a6d283c22 204 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 204 29.605 T 15-10-2018 IPR007451 High frequency lysogenization protein HflD D934_08785 f159ee182780c6de9b602678df2bab3f 321 SUPERFAMILY SSF51430 1 319 4.85E-89 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily D934_08785 f159ee182780c6de9b602678df2bab3f 321 Pfam PF00248 Aldo/keto reductase family 16 307 2.9E-67 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain D934_08785 f159ee182780c6de9b602678df2bab3f 321 Gene3D G3DSA:3.20.20.100 1 321 2.5E-107 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily D934_08785 f159ee182780c6de9b602678df2bab3f 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 164 183 8.8E-12 T 15-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 D934_08785 f159ee182780c6de9b602678df2bab3f 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 274 287 8.8E-12 T 15-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 D934_08785 f159ee182780c6de9b602678df2bab3f 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 113 123 8.8E-12 T 15-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 D934_08785 f159ee182780c6de9b602678df2bab3f 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 208 214 8.8E-12 T 15-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 D934_08785 f159ee182780c6de9b602678df2bab3f 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 236 248 8.8E-12 T 15-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 D934_08785 f159ee182780c6de9b602678df2bab3f 321 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 261 273 8.8E-12 T 15-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 D934_02380 91a1e8a3b197c648df5fc4820263f437 402 Gene3D G3DSA:2.40.160.10 22 402 1.3E-73 T 15-10-2018 IPR023614 Porin domain superfamily D934_02380 91a1e8a3b197c648df5fc4820263f437 402 SUPERFAMILY SSF56935 38 387 3.66E-8 T 15-10-2018 D934_02380 91a1e8a3b197c648df5fc4820263f437 402 Pfam PF07396 Phosphate-selective porin O and P 39 402 5.9E-96 T 15-10-2018 IPR010870 Phosphate-selective porin O/P D934_00025 fec3494ffe5689b2c4cf2b744836158f 698 SUPERFAMILY SSF140356 21 123 2.35E-34 T 15-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 D934_00025 fec3494ffe5689b2c4cf2b744836158f 698 SUPERFAMILY SSF56024 518 696 7.4E-67 T 15-10-2018 D934_00025 fec3494ffe5689b2c4cf2b744836158f 698 Gene3D G3DSA:3.30.870.10 334 517 8.6E-73 T 15-10-2018 D934_00025 fec3494ffe5689b2c4cf2b744836158f 698 SUPERFAMILY SSF56024 333 512 1.07E-57 T 15-10-2018 D934_00025 fec3494ffe5689b2c4cf2b744836158f 698 Hamap MF_00347 Polyphosphate kinase [ppk]. 22 691 27.49 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 D934_00025 fec3494ffe5689b2c4cf2b744836158f 698 Pfam PF02503 Polyphosphate kinase middle domain 139 340 1.5E-57 T 15-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 D934_00025 fec3494ffe5689b2c4cf2b744836158f 698 Pfam PF13089 Polyphosphate kinase N-terminal domain 25 128 2.0E-30 T 15-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 D934_00025 fec3494ffe5689b2c4cf2b744836158f 698 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 25 696 4.1E-275 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 D934_00025 fec3494ffe5689b2c4cf2b744836158f 698 Gene3D G3DSA:3.30.1840.10 20 332 8.0E-91 T 15-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 D934_00025 fec3494ffe5689b2c4cf2b744836158f 698 PIRSF PIRSF015589 6 698 2.6E-260 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 D934_00025 fec3494ffe5689b2c4cf2b744836158f 698 Gene3D G3DSA:3.30.870.10 521 698 5.7E-63 T 15-10-2018 D934_00025 fec3494ffe5689b2c4cf2b744836158f 698 Pfam PF13090 Polyphosphate kinase C-terminal domain 347 694 3.7E-149 T 15-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 D934_00025 fec3494ffe5689b2c4cf2b744836158f 698 SUPERFAMILY SSF143724 129 333 2.55E-57 T 15-10-2018 D934_00095 fe73e4750e5265b32a5f12468b801e9a 330 Pfam PF01479 S4 domain 30 76 3.9E-11 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_00095 fe73e4750e5265b32a5f12468b801e9a 330 SUPERFAMILY SSF55120 100 329 1.1E-55 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_00095 fe73e4750e5265b32a5f12468b801e9a 330 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 26 329 3.5E-69 T 15-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_00095 fe73e4750e5265b32a5f12468b801e9a 330 Gene3D G3DSA:3.30.2350.10 102 330 9.3E-66 T 15-10-2018 D934_00095 fe73e4750e5265b32a5f12468b801e9a 330 Gene3D G3DSA:3.10.290.10 19 81 3.7E-18 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D934_00095 fe73e4750e5265b32a5f12468b801e9a 330 SUPERFAMILY SSF55174 29 80 4.45E-10 T 15-10-2018 D934_00095 fe73e4750e5265b32a5f12468b801e9a 330 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 148 162 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_00095 fe73e4750e5265b32a5f12468b801e9a 330 Pfam PF00849 RNA pseudouridylate synthase 111 266 5.0E-26 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_00095 fe73e4750e5265b32a5f12468b801e9a 330 SMART SM00363 30 89 1.0E-9 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_01325 d68f314abd1ff7e22dce9993b364e630 610 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 8.0E-248 T 15-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D934_01325 d68f314abd1ff7e22dce9993b364e630 610 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D934_01325 d68f314abd1ff7e22dce9993b364e630 610 Pfam PF00920 Dehydratase family 34 603 1.6E-217 T 15-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D934_01325 d68f314abd1ff7e22dce9993b364e630 610 SUPERFAMILY SSF143975 4 418 9.02E-135 T 15-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D934_01325 d68f314abd1ff7e22dce9993b364e630 610 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.452 T 15-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D934_01325 d68f314abd1ff7e22dce9993b364e630 610 Gene3D G3DSA:3.50.30.80 419 570 9.2E-53 T 15-10-2018 D934_01325 d68f314abd1ff7e22dce9993b364e630 610 SUPERFAMILY SSF52016 419 606 1.41E-59 T 15-10-2018 D934_01325 d68f314abd1ff7e22dce9993b364e630 610 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D934_12610 3fe72638e3fb83470d9819676e5b9dea 286 Gene3D G3DSA:1.25.40.10 132 195 1.4E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_12610 3fe72638e3fb83470d9819676e5b9dea 286 Pfam PF14559 Tetratricopeptide repeat 136 193 1.9E-6 T 15-10-2018 D934_12610 3fe72638e3fb83470d9819676e5b9dea 286 Gene3D G3DSA:1.25.40.10 200 286 9.0E-19 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_12610 3fe72638e3fb83470d9819676e5b9dea 286 Pfam PF14561 Tetratricopeptide repeat 201 286 8.1E-20 T 15-10-2018 D934_12610 3fe72638e3fb83470d9819676e5b9dea 286 Pfam PF00085 Thioredoxin 7 111 1.8E-25 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 D934_12610 3fe72638e3fb83470d9819676e5b9dea 286 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 D934_12610 3fe72638e3fb83470d9819676e5b9dea 286 SUPERFAMILY SSF48452 136 252 2.23E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_12610 3fe72638e3fb83470d9819676e5b9dea 286 Gene3D G3DSA:3.40.30.10 1 111 3.7E-31 T 15-10-2018 D934_12610 3fe72638e3fb83470d9819676e5b9dea 286 SUPERFAMILY SSF52833 4 115 4.07E-33 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_10740 ed9c66c52da2be58f40b6a89e7670a44 160 Gene3D G3DSA:3.40.50.2300 1 157 5.5E-47 T 15-10-2018 D934_10740 ed9c66c52da2be58f40b6a89e7670a44 160 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 9.9E-34 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I D934_10740 ed9c66c52da2be58f40b6a89e7670a44 160 SMART SM00226 1 150 2.3E-38 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I D934_10740 ed9c66c52da2be58f40b6a89e7670a44 160 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 1.3E-21 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 D934_10740 ed9c66c52da2be58f40b6a89e7670a44 160 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 1.3E-21 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 D934_10740 ed9c66c52da2be58f40b6a89e7670a44 160 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 1.3E-21 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 D934_10740 ed9c66c52da2be58f40b6a89e7670a44 160 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 122 137 1.3E-21 T 15-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 D934_10740 ed9c66c52da2be58f40b6a89e7670a44 160 SUPERFAMILY SSF52788 1 151 3.27E-45 T 15-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily D934_09085 045aba9db664d5877657d96cb0037b6e 170 SUPERFAMILY SSF69349 7 166 6.12E-40 T 15-10-2018 D934_10275 045aba9db664d5877657d96cb0037b6e 170 SUPERFAMILY SSF69349 7 166 6.12E-40 T 15-10-2018 D934_07865 045aba9db664d5877657d96cb0037b6e 170 SUPERFAMILY SSF69349 7 166 6.12E-40 T 15-10-2018 D934_04995 649b7e88071e531416125aefccdbc833 422 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 133 402 7.2E-80 T 15-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 D934_04995 649b7e88071e531416125aefccdbc833 422 SUPERFAMILY SSF101960 19 415 2.75E-92 T 15-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily D934_04995 649b7e88071e531416125aefccdbc833 422 Pfam PF01458 Uncharacterized protein family (UPF0051) 169 392 1.7E-62 T 15-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 D934_01770 76dd47103ed4eed702d89e85de291a33 182 Pfam PF00293 NUDIX domain 46 161 4.1E-15 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D934_01770 76dd47103ed4eed702d89e85de291a33 182 ProSitePatterns PS00893 Nudix box signature. 78 99 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D934_01770 76dd47103ed4eed702d89e85de291a33 182 SUPERFAMILY SSF55811 19 178 6.5E-35 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D934_01770 76dd47103ed4eed702d89e85de291a33 182 Gene3D G3DSA:3.90.79.10 14 182 4.2E-42 T 15-10-2018 D934_01050 70f64b5657c793afe82a18fa60b6bec5 244 Gene3D G3DSA:3.20.20.70 11 237 2.0E-64 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_01050 70f64b5657c793afe82a18fa60b6bec5 244 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 12 236 32.241 T 15-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_01050 70f64b5657c793afe82a18fa60b6bec5 244 SMART SM00934 14 231 7.5E-66 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_01050 70f64b5657c793afe82a18fa60b6bec5 244 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 67 80 - T 15-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_01050 70f64b5657c793afe82a18fa60b6bec5 244 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 14 230 1.8E-39 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_01050 70f64b5657c793afe82a18fa60b6bec5 244 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 15 232 9.7E-61 T 15-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_01050 70f64b5657c793afe82a18fa60b6bec5 244 SUPERFAMILY SSF51366 12 235 1.67E-56 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D934_04945 f26a263acfc7747c4caa3cbb5ae82160 429 Pfam PF07690 Major Facilitator Superfamily 18 376 1.1E-14 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D934_04945 f26a263acfc7747c4caa3cbb5ae82160 429 Gene3D G3DSA:1.20.1250.20 231 416 1.8E-38 T 15-10-2018 D934_04945 f26a263acfc7747c4caa3cbb5ae82160 429 Gene3D G3DSA:1.20.1250.20 8 224 7.3E-44 T 15-10-2018 D934_04945 f26a263acfc7747c4caa3cbb5ae82160 429 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 93 410 6.4E-151 T 15-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 D934_04945 f26a263acfc7747c4caa3cbb5ae82160 429 SUPERFAMILY SSF103473 10 423 1.7E-30 T 15-10-2018 IPR036259 MFS transporter superfamily D934_01575 35aa0a16506833cfecdedf9e976cc956 155 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 10 154 31.952 T 15-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 D934_01575 35aa0a16506833cfecdedf9e976cc956 155 Pfam PF00692 dUTPase 21 153 2.2E-34 T 15-10-2018 IPR029054 dUTPase-like D934_01575 35aa0a16506833cfecdedf9e976cc956 155 SUPERFAMILY SSF51283 9 154 3.4E-49 T 15-10-2018 IPR036157 dUTPase-like superfamily D934_01575 35aa0a16506833cfecdedf9e976cc956 155 TIGRFAM TIGR00576 dut: dUTP diphosphatase 16 153 1.4E-44 T 15-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 D934_01575 35aa0a16506833cfecdedf9e976cc956 155 Gene3D G3DSA:2.70.40.10 2 153 4.2E-46 T 15-10-2018 IPR036157 dUTPase-like superfamily D934_07590 0bf6ca95b2aaed57d9d28b312615924f 909 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 286 296 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site D934_07590 0bf6ca95b2aaed57d9d28b312615924f 909 Pfam PF12951 Passenger-associated-transport-repeat 376 406 1.2E-9 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat D934_07590 0bf6ca95b2aaed57d9d28b312615924f 909 Gene3D G3DSA:3.40.50.200 9 347 7.9E-59 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D934_07590 0bf6ca95b2aaed57d9d28b312615924f 909 Gene3D G3DSA:2.40.128.130 599 909 9.0E-33 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily D934_07590 0bf6ca95b2aaed57d9d28b312615924f 909 PRINTS PR00723 Subtilisin serine protease family (S8) signature 74 87 2.9E-11 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related D934_07590 0bf6ca95b2aaed57d9d28b312615924f 909 PRINTS PR00723 Subtilisin serine protease family (S8) signature 31 50 2.9E-11 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related D934_07590 0bf6ca95b2aaed57d9d28b312615924f 909 PRINTS PR00723 Subtilisin serine protease family (S8) signature 285 301 2.9E-11 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related D934_07590 0bf6ca95b2aaed57d9d28b312615924f 909 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 36 47 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site D934_07590 0bf6ca95b2aaed57d9d28b312615924f 909 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 375 407 1.0E-11 T 15-10-2018 IPR013425 Autotransporter-associated beta strand repeat D934_07590 0bf6ca95b2aaed57d9d28b312615924f 909 SUPERFAMILY SSF52743 12 347 7.72E-58 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D934_07590 0bf6ca95b2aaed57d9d28b312615924f 909 Pfam PF00082 Subtilase family 31 336 7.0E-37 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 D934_07590 0bf6ca95b2aaed57d9d28b312615924f 909 SUPERFAMILY SSF103515 607 905 2.09E-32 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily D934_07590 0bf6ca95b2aaed57d9d28b312615924f 909 Pfam PF03797 Autotransporter beta-domain 648 878 5.2E-29 T 15-10-2018 IPR005546 Autotransporter beta-domain D934_07590 0bf6ca95b2aaed57d9d28b312615924f 909 SMART SM00869 641 899 7.2E-21 T 15-10-2018 IPR005546 Autotransporter beta-domain D934_13500 2c33b1623769e89c9ad43ac70cb44e5d 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 528 5.3E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_13500 2c33b1623769e89c9ad43ac70cb44e5d 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 5.3E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_13500 2c33b1623769e89c9ad43ac70cb44e5d 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 490 5.3E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_13500 2c33b1623769e89c9ad43ac70cb44e5d 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 509 5.3E-13 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_13500 2c33b1623769e89c9ad43ac70cb44e5d 536 SUPERFAMILY SSF55874 372 528 2.36E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_13500 2c33b1623769e89c9ad43ac70cb44e5d 536 SMART SM00387 422 531 4.6E-19 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_13500 2c33b1623769e89c9ad43ac70cb44e5d 536 Gene3D G3DSA:3.30.450.20 187 295 1.3E-5 T 15-10-2018 D934_13500 2c33b1623769e89c9ad43ac70cb44e5d 536 SUPERFAMILY SSF47384 313 378 8.83E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D934_13500 2c33b1623769e89c9ad43ac70cb44e5d 536 Gene3D G3DSA:1.10.287.130 304 374 9.6E-15 T 15-10-2018 D934_13500 2c33b1623769e89c9ad43ac70cb44e5d 536 SMART SM00388 314 380 1.7E-16 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_13500 2c33b1623769e89c9ad43ac70cb44e5d 536 Pfam PF00512 His Kinase A (phospho-acceptor) domain 314 378 9.1E-14 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_13500 2c33b1623769e89c9ad43ac70cb44e5d 536 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 528 2.9E-14 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_13500 2c33b1623769e89c9ad43ac70cb44e5d 536 Gene3D G3DSA:3.30.565.10 375 529 1.0E-28 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_11690 b7b9b9f3428764d73b259934efb603cd 283 Gene3D G3DSA:3.90.1720.10 157 283 4.1E-39 T 15-10-2018 D934_11690 b7b9b9f3428764d73b259934efb603cd 283 SUPERFAMILY SSF54001 155 282 6.62E-40 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily D934_11690 b7b9b9f3428764d73b259934efb603cd 283 Pfam PF00877 NlpC/P60 family 173 281 4.5E-29 T 15-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain D934_03685 53e053a84e3a9c107b401bdfa4fedec6 833 SMART SM00490 232 330 2.6E-16 T 15-10-2018 IPR001650 Helicase, C-terminal D934_03685 53e053a84e3a9c107b401bdfa4fedec6 833 PIRSF PIRSF005496 1 833 0.0 T 15-10-2018 D934_03685 53e053a84e3a9c107b401bdfa4fedec6 833 SMART SM00847 385 481 2.0E-10 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 D934_03685 53e053a84e3a9c107b401bdfa4fedec6 833 SMART SM00487 3 190 9.4E-14 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_03685 53e053a84e3a9c107b401bdfa4fedec6 833 Pfam PF04408 Helicase associated domain (HA2) 386 450 1.2E-15 T 15-10-2018 IPR007502 Helicase-associated domain GO:0004386 D934_03685 53e053a84e3a9c107b401bdfa4fedec6 833 Gene3D G3DSA:1.20.120.1080 369 455 3.0E-9 T 15-10-2018 D934_03685 53e053a84e3a9c107b401bdfa4fedec6 833 Pfam PF08482 ATP-dependent helicase C-terminal 682 819 6.1E-50 T 15-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal D934_03685 53e053a84e3a9c107b401bdfa4fedec6 833 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 6 830 0.0 T 15-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 D934_03685 53e053a84e3a9c107b401bdfa4fedec6 833 Pfam PF00271 Helicase conserved C-terminal domain 210 329 3.1E-16 T 15-10-2018 IPR001650 Helicase, C-terminal D934_03685 53e053a84e3a9c107b401bdfa4fedec6 833 SUPERFAMILY SSF52540 18 341 1.63E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_03685 53e053a84e3a9c107b401bdfa4fedec6 833 Gene3D G3DSA:3.40.50.300 182 347 4.8E-52 T 15-10-2018 D934_03685 53e053a84e3a9c107b401bdfa4fedec6 833 Gene3D G3DSA:3.40.50.300 1 181 6.0E-52 T 15-10-2018 D934_00215 6e53e196a947de8a5cc89e751c2941ed 185 Gene3D G3DSA:3.30.70.940 1 125 9.8E-39 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D934_00215 6e53e196a947de8a5cc89e751c2941ed 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 15-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site D934_00215 6e53e196a947de8a5cc89e751c2941ed 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 185 23.327 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D934_00215 6e53e196a947de8a5cc89e751c2941ed 185 SUPERFAMILY SSF82679 2 122 6.15E-33 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D934_00215 6e53e196a947de8a5cc89e751c2941ed 185 SMART SM00739 131 158 4.2E-4 T 15-10-2018 IPR005824 KOW D934_00215 6e53e196a947de8a5cc89e751c2941ed 185 SMART SM00738 1 119 6.5E-40 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D934_00215 6e53e196a947de8a5cc89e751c2941ed 185 Pfam PF02357 Transcription termination factor nusG 2 115 2.3E-22 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D934_00215 6e53e196a947de8a5cc89e751c2941ed 185 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 4.9E-17 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D934_00215 6e53e196a947de8a5cc89e751c2941ed 185 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 4.9E-17 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D934_00215 6e53e196a947de8a5cc89e751c2941ed 185 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 4.9E-17 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D934_00215 6e53e196a947de8a5cc89e751c2941ed 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 184 7.7E-59 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D934_00215 6e53e196a947de8a5cc89e751c2941ed 185 SUPERFAMILY SSF50104 129 184 4.36E-18 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily D934_00215 6e53e196a947de8a5cc89e751c2941ed 185 Pfam PF00467 KOW motif 134 164 2.4E-6 T 15-10-2018 IPR005824 KOW D934_00215 6e53e196a947de8a5cc89e751c2941ed 185 Gene3D G3DSA:2.30.30.30 126 184 1.6E-23 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.0E-13 T 15-10-2018 D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.0E-13 T 15-10-2018 D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.0E-13 T 15-10-2018 D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 Gene3D G3DSA:3.40.50.880 1 192 2.5E-61 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 SUPERFAMILY SSF52317 1 192 1.55E-52 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.2E-6 T 15-10-2018 D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.2E-6 T 15-10-2018 D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 8.4E-36 T 15-10-2018 D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 8.4E-36 T 15-10-2018 D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 PRINTS PR00097 Anthranilate synthase component II signature 169 182 8.4E-36 T 15-10-2018 D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 8.4E-36 T 15-10-2018 D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 8.4E-36 T 15-10-2018 D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 8.4E-36 T 15-10-2018 D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 Pfam PF00117 Glutamine amidotransferase class-I 4 190 1.7E-52 T 15-10-2018 IPR017926 Glutamine amidotransferase D934_01855 7a9fdf3416b18371251d3f824d3136ce 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 1.2E-78 T 15-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_07995 61b62e63647898c5e7f6ee5c8c4a6283 128 Gene3D G3DSA:2.60.300.12 22 128 7.7E-35 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D934_07995 61b62e63647898c5e7f6ee5c8c4a6283 128 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 9 128 35.265 T 15-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 D934_07995 61b62e63647898c5e7f6ee5c8c4a6283 128 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 24 128 1.1E-37 T 15-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 D934_07995 61b62e63647898c5e7f6ee5c8c4a6283 128 SUPERFAMILY SSF89360 23 117 1.04E-29 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D934_07995 61b62e63647898c5e7f6ee5c8c4a6283 128 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 109 126 - T 15-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 D934_07995 61b62e63647898c5e7f6ee5c8c4a6283 128 Pfam PF01521 Iron-sulphur cluster biosynthesis 23 123 2.7E-19 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 D934_13655 0e878b3016664c034e9adeb1d24cc87c 192 Pfam PF02954 Bacterial regulatory protein, Fis family 147 180 3.0E-12 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D934_13655 0e878b3016664c034e9adeb1d24cc87c 192 Gene3D G3DSA:3.40.50.2300 5 127 6.0E-26 T 15-10-2018 D934_13655 0e878b3016664c034e9adeb1d24cc87c 192 Pfam PF00072 Response regulator receiver domain 10 118 1.5E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_13655 0e878b3016664c034e9adeb1d24cc87c 192 SUPERFAMILY SSF46689 128 180 4.93E-15 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D934_13655 0e878b3016664c034e9adeb1d24cc87c 192 SMART SM00448 6 118 3.0E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_13655 0e878b3016664c034e9adeb1d24cc87c 192 SUPERFAMILY SSF52172 10 132 2.56E-28 T 15-10-2018 IPR011006 CheY-like superfamily D934_13655 0e878b3016664c034e9adeb1d24cc87c 192 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 147 164 1.3E-8 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D934_13655 0e878b3016664c034e9adeb1d24cc87c 192 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 164 184 1.3E-8 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D934_13655 0e878b3016664c034e9adeb1d24cc87c 192 Gene3D G3DSA:1.10.10.60 128 183 3.8E-20 T 15-10-2018 D934_08835 5c0468a6243a5dbc165102db0316836b 204 SUPERFAMILY SSF51391 4 201 6.41E-54 T 15-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D934_08835 5c0468a6243a5dbc165102db0316836b 204 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 7 196 2.0E-57 T 15-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D934_08835 5c0468a6243a5dbc165102db0316836b 204 Gene3D G3DSA:3.20.20.70 1 203 8.1E-52 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_08835 5c0468a6243a5dbc165102db0316836b 204 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 5 203 23.721 T 15-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D934_08835 5c0468a6243a5dbc165102db0316836b 204 Pfam PF02581 Thiamine monophosphate synthase 7 185 1.2E-49 T 15-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D934_11170 5cd929c24464598be944d121b2a2e5c8 720 ProSitePatterns PS00211 ABC transporters family signature. 617 631 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_11170 5cd929c24464598be944d121b2a2e5c8 720 Pfam PF00664 ABC transporter transmembrane region 168 434 3.1E-52 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D934_11170 5cd929c24464598be944d121b2a2e5c8 720 Gene3D G3DSA:1.20.1560.10 152 465 1.5E-76 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D934_11170 5cd929c24464598be944d121b2a2e5c8 720 SUPERFAMILY SSF90123 153 460 3.14E-66 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D934_11170 5cd929c24464598be944d121b2a2e5c8 720 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 24 717 0.0 T 15-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 D934_11170 5cd929c24464598be944d121b2a2e5c8 720 SUPERFAMILY SSF52540 469 716 8.15E-89 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_11170 5cd929c24464598be944d121b2a2e5c8 720 Gene3D G3DSA:3.40.50.300 474 718 5.4E-92 T 15-10-2018 D934_11170 5cd929c24464598be944d121b2a2e5c8 720 Gene3D G3DSA:3.90.70.10 21 148 3.8E-24 T 15-10-2018 D934_11170 5cd929c24464598be944d121b2a2e5c8 720 Pfam PF00005 ABC transporter 496 645 9.8E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_11170 5cd929c24464598be944d121b2a2e5c8 720 SMART SM00382 505 691 1.3E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_11170 5cd929c24464598be944d121b2a2e5c8 720 Pfam PF03412 Peptidase C39 family 18 140 1.5E-12 T 15-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 D934_07290 92de9f0e4003cfe23d6c22ccd1bc02e2 260 Pfam PF02602 Uroporphyrinogen-III synthase HemD 28 226 3.3E-22 T 15-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_07290 92de9f0e4003cfe23d6c22ccd1bc02e2 260 Gene3D G3DSA:3.40.50.10090 17 246 1.8E-39 T 15-10-2018 D934_07290 92de9f0e4003cfe23d6c22ccd1bc02e2 260 Gene3D G3DSA:3.40.50.10090 45 171 1.8E-39 T 15-10-2018 D934_07290 92de9f0e4003cfe23d6c22ccd1bc02e2 260 SUPERFAMILY SSF69618 14 251 2.09E-42 T 15-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D934_06125 bc52dd2edc580c264e72e16f1e8e995c 323 SUPERFAMILY SSF51735 1 317 1.54E-89 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_06125 bc52dd2edc580c264e72e16f1e8e995c 323 Gene3D G3DSA:3.40.50.720 4 300 2.7E-93 T 15-10-2018 D934_06125 bc52dd2edc580c264e72e16f1e8e995c 323 Gene3D G3DSA:3.90.25.10 178 312 2.7E-93 T 15-10-2018 D934_06125 bc52dd2edc580c264e72e16f1e8e995c 323 PRINTS PR01713 Nucleotide sugar epimerase signature 214 229 1.2E-22 T 15-10-2018 D934_06125 bc52dd2edc580c264e72e16f1e8e995c 323 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.2E-22 T 15-10-2018 D934_06125 bc52dd2edc580c264e72e16f1e8e995c 323 PRINTS PR01713 Nucleotide sugar epimerase signature 240 255 1.2E-22 T 15-10-2018 D934_06125 bc52dd2edc580c264e72e16f1e8e995c 323 PRINTS PR01713 Nucleotide sugar epimerase signature 279 296 1.2E-22 T 15-10-2018 D934_06125 bc52dd2edc580c264e72e16f1e8e995c 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 246 2.5E-59 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 D934_04520 e7a845ccba79127668013da0f8c9e753 628 Pfam PF16510 Phage P22-like portal protein 30 586 1.6E-70 T 15-10-2018 IPR032427 Phage P22-like portal protein D934_12935 d854744a8474f3f5265f910fdc0b83d0 244 Gene3D G3DSA:3.10.350.10 31 101 6.9E-16 T 15-10-2018 IPR036779 LysM domain superfamily D934_12935 d854744a8474f3f5265f910fdc0b83d0 244 Gene3D G3DSA:2.70.70.10 114 242 5.6E-28 T 15-10-2018 IPR011055 Duplicated hybrid motif D934_12935 d854744a8474f3f5265f910fdc0b83d0 244 Pfam PF01476 LysM domain 48 88 2.8E-13 T 15-10-2018 IPR018392 LysM domain D934_12935 d854744a8474f3f5265f910fdc0b83d0 244 SUPERFAMILY SSF51261 47 241 1.57E-40 T 15-10-2018 IPR011055 Duplicated hybrid motif D934_12935 d854744a8474f3f5265f910fdc0b83d0 244 SMART SM00257 46 90 6.9E-12 T 15-10-2018 IPR018392 LysM domain D934_12935 d854744a8474f3f5265f910fdc0b83d0 244 Pfam PF01551 Peptidase family M23 150 237 6.3E-23 T 15-10-2018 IPR016047 Peptidase M23 D934_00410 eb3c26cf8458b095df70bd00d6db0d6e 535 Gene3D G3DSA:2.70.98.10 43 411 1.3E-153 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 D934_00410 eb3c26cf8458b095df70bd00d6db0d6e 535 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 534 59.238 T 15-10-2018 IPR023724 Glucan biosynthesis, MdoD D934_00410 eb3c26cf8458b095df70bd00d6db0d6e 535 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 44 524 7.9E-192 T 15-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 D934_00410 eb3c26cf8458b095df70bd00d6db0d6e 535 PIRSF PIRSF006281 1 528 4.7E-208 T 15-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD D934_00410 eb3c26cf8458b095df70bd00d6db0d6e 535 SUPERFAMILY SSF81296 415 527 1.34E-23 T 15-10-2018 IPR014756 Immunoglobulin E-set D934_00410 eb3c26cf8458b095df70bd00d6db0d6e 535 SUPERFAMILY SSF74650 44 413 9.42E-154 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 D934_00410 eb3c26cf8458b095df70bd00d6db0d6e 535 Gene3D G3DSA:2.60.40.10 415 534 2.8E-15 T 15-10-2018 IPR013783 Immunoglobulin-like fold D934_07655 fcd8b51b415a71a33dd4df856f7254c4 148 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 148 4.9E-44 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D934_07655 fcd8b51b415a71a33dd4df856f7254c4 148 SUPERFAMILY SSF50249 3 148 1.13E-50 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_07655 fcd8b51b415a71a33dd4df856f7254c4 148 Gene3D G3DSA:2.40.50.140 1 124 1.6E-43 T 15-10-2018 D934_07655 fcd8b51b415a71a33dd4df856f7254c4 148 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 34.695 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D934_07655 fcd8b51b415a71a33dd4df856f7254c4 148 Pfam PF00436 Single-strand binding protein family 5 108 1.7E-38 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 D934_07655 fcd8b51b415a71a33dd4df856f7254c4 148 PIRSF PIRSF002070 1 147 3.7E-33 T 15-10-2018 D934_11285 9aa7af8a74a6feda8f82e1300e7d5a29 357 Pfam PF01018 GTP1/OBG 4 158 2.5E-60 T 15-10-2018 IPR006169 GTP1/OBG domain D934_11285 9aa7af8a74a6feda8f82e1300e7d5a29 357 SUPERFAMILY SSF52540 151 346 3.99E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_11285 9aa7af8a74a6feda8f82e1300e7d5a29 357 PIRSF PIRSF002401 1 357 4.6E-134 T 15-10-2018 IPR035101 GTP-binding protein, Obg-type D934_11285 9aa7af8a74a6feda8f82e1300e7d5a29 357 SUPERFAMILY SSF82051 2 158 4.45E-59 T 15-10-2018 IPR036726 GTP1/OBG domain superfamily D934_11285 9aa7af8a74a6feda8f82e1300e7d5a29 357 Gene3D G3DSA:3.40.50.300 160 356 3.1E-46 T 15-10-2018 D934_11285 9aa7af8a74a6feda8f82e1300e7d5a29 357 Gene3D G3DSA:2.70.210.12 1 158 2.0E-62 T 15-10-2018 IPR036726 GTP1/OBG domain superfamily D934_11285 9aa7af8a74a6feda8f82e1300e7d5a29 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 5.2E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_11285 9aa7af8a74a6feda8f82e1300e7d5a29 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 5.2E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_11285 9aa7af8a74a6feda8f82e1300e7d5a29 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 5.2E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_11285 9aa7af8a74a6feda8f82e1300e7d5a29 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 5.2E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_11285 9aa7af8a74a6feda8f82e1300e7d5a29 357 Hamap MF_01454 GTPase Obg [obg]. 2 343 47.334 T 15-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 D934_11285 9aa7af8a74a6feda8f82e1300e7d5a29 357 Pfam PF01926 50S ribosome-binding GTPase 162 294 3.0E-22 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_11285 9aa7af8a74a6feda8f82e1300e7d5a29 357 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 341 4.2E-136 T 15-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 D934_11285 9aa7af8a74a6feda8f82e1300e7d5a29 357 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 15-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 D934_13125 076a8ad6519a22282eef6ecb79d20c6d 584 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 42 220 5.0E-15 T 15-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 D934_13125 076a8ad6519a22282eef6ecb79d20c6d 584 SUPERFAMILY SSF51445 32 344 2.28E-38 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily D934_13125 076a8ad6519a22282eef6ecb79d20c6d 584 Gene3D G3DSA:2.60.40.760 485 578 4.2E-31 T 15-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily D934_13125 076a8ad6519a22282eef6ecb79d20c6d 584 SUPERFAMILY SSF50685 381 489 4.88E-17 T 15-10-2018 IPR036908 RlpA-like domain superfamily D934_13125 076a8ad6519a22282eef6ecb79d20c6d 584 Gene3D G3DSA:2.40.40.10 378 484 8.9E-23 T 15-10-2018 IPR036908 RlpA-like domain superfamily D934_13125 076a8ad6519a22282eef6ecb79d20c6d 584 SUPERFAMILY SSF49590 488 559 1.09E-11 T 15-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily D934_13125 076a8ad6519a22282eef6ecb79d20c6d 584 Gene3D G3DSA:3.20.20.80 27 341 2.6E-44 T 15-10-2018 D934_09105 f3b5f0c052099f5d71f6b614a14ce46b 263 TIGRFAM TIGR00571 dam: DNA adenine methylase 3 253 1.2E-34 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D934_09105 f3b5f0c052099f5d71f6b614a14ce46b 263 PIRSF PIRSF000398 1 258 9.7E-44 T 15-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 D934_09105 f3b5f0c052099f5d71f6b614a14ce46b 263 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 4.9E-13 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D934_09105 f3b5f0c052099f5d71f6b614a14ce46b 263 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 171 183 4.9E-13 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D934_09105 f3b5f0c052099f5d71f6b614a14ce46b 263 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 8 24 4.9E-13 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D934_09105 f3b5f0c052099f5d71f6b614a14ce46b 263 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 29 43 4.9E-13 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D934_09105 f3b5f0c052099f5d71f6b614a14ce46b 263 SUPERFAMILY SSF53335 1 255 7.23E-61 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_09105 f3b5f0c052099f5d71f6b614a14ce46b 263 Gene3D G3DSA:1.10.1020.10 57 151 6.9E-43 T 15-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 D934_09105 f3b5f0c052099f5d71f6b614a14ce46b 263 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 8 237 5.0E-25 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D934_09105 f3b5f0c052099f5d71f6b614a14ce46b 263 Gene3D G3DSA:3.40.50.150 6 223 6.9E-43 T 15-10-2018 D934_11275 e07a5ddec4cacde1bf18d260d7061918 536 PRINTS PR01806 Virulence factor MviN signature 262 288 1.2E-69 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D934_11275 e07a5ddec4cacde1bf18d260d7061918 536 PRINTS PR01806 Virulence factor MviN signature 435 452 1.2E-69 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D934_11275 e07a5ddec4cacde1bf18d260d7061918 536 PRINTS PR01806 Virulence factor MviN signature 136 160 1.2E-69 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D934_11275 e07a5ddec4cacde1bf18d260d7061918 536 PRINTS PR01806 Virulence factor MviN signature 160 181 1.2E-69 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D934_11275 e07a5ddec4cacde1bf18d260d7061918 536 PRINTS PR01806 Virulence factor MviN signature 360 379 1.2E-69 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D934_11275 e07a5ddec4cacde1bf18d260d7061918 536 PRINTS PR01806 Virulence factor MviN signature 36 55 1.2E-69 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D934_11275 e07a5ddec4cacde1bf18d260d7061918 536 PRINTS PR01806 Virulence factor MviN signature 55 71 1.2E-69 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D934_11275 e07a5ddec4cacde1bf18d260d7061918 536 PIRSF PIRSF002869 1 532 7.9E-139 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D934_11275 e07a5ddec4cacde1bf18d260d7061918 536 Pfam PF03023 MviN-like protein 31 493 1.5E-118 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D934_11275 e07a5ddec4cacde1bf18d260d7061918 536 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 6 493 19.401 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D934_11275 e07a5ddec4cacde1bf18d260d7061918 536 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 6 526 7.4E-116 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D934_02145 3f35073e30ab3658fcc1b9018585fa02 684 SUPERFAMILY SSF48317 246 443 2.22E-22 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily D934_02145 3f35073e30ab3658fcc1b9018585fa02 684 Pfam PF01569 PAP2 superfamily 356 435 3.0E-11 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase D934_02145 3f35073e30ab3658fcc1b9018585fa02 684 Pfam PF09335 SNARE associated Golgi protein 40 163 3.3E-17 T 15-10-2018 IPR032816 SNARE associated Golgi protein D934_02145 3f35073e30ab3658fcc1b9018585fa02 684 Pfam PF14067 LssY C-terminus 496 619 4.5E-13 T 15-10-2018 IPR025902 LssY-like C-terminal domain D934_02145 3f35073e30ab3658fcc1b9018585fa02 684 Gene3D G3DSA:1.20.144.10 344 448 3.2E-16 T 15-10-2018 D934_04045 8790855ca09f6fc1a75d4d48855ca17d 347 Pfam PF02547 Queuosine biosynthesis protein 5 339 7.8E-128 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 D934_04045 8790855ca09f6fc1a75d4d48855ca17d 347 Gene3D G3DSA:3.40.1780.10 15 339 1.0E-112 T 15-10-2018 D934_04045 8790855ca09f6fc1a75d4d48855ca17d 347 Gene3D G3DSA:2.40.10.240 65 162 1.0E-112 T 15-10-2018 D934_04045 8790855ca09f6fc1a75d4d48855ca17d 347 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 2 340 46.375 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 D934_04045 8790855ca09f6fc1a75d4d48855ca17d 347 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 339 2.3E-127 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 D934_04045 8790855ca09f6fc1a75d4d48855ca17d 347 SUPERFAMILY SSF111337 5 340 1.44E-130 T 15-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 D934_02730 c0297ee16e3eb42453c09def09963256 284 Pfam PF01148 Cytidylyltransferase family 4 279 1.9E-70 T 15-10-2018 D934_02730 c0297ee16e3eb42453c09def09963256 284 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 240 266 - T 15-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 D934_08260 a3bdb5d4d395272318251e65f2c72472 288 Gene3D G3DSA:1.10.260.40 18 125 1.0E-20 T 15-10-2018 D934_08260 a3bdb5d4d395272318251e65f2c72472 288 Pfam PF13413 Helix-turn-helix domain 28 88 3.5E-19 T 15-10-2018 D934_08260 a3bdb5d4d395272318251e65f2c72472 288 Pfam PF13464 Domain of unknown function (DUF4115) 204 276 2.0E-13 T 15-10-2018 IPR025194 Domain of unknown function DUF4115 D934_01925 77f6f18dd61c3d8cf045607d532d1848 421 Pfam PF12626 Polymerase A arginine-rich C-terminus 305 407 2.6E-27 T 15-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain D934_01925 77f6f18dd61c3d8cf045607d532d1848 421 SUPERFAMILY SSF81891 161 371 2.35E-44 T 15-10-2018 D934_01925 77f6f18dd61c3d8cf045607d532d1848 421 Gene3D G3DSA:1.10.3090.10 160 406 7.8E-78 T 15-10-2018 D934_01925 77f6f18dd61c3d8cf045607d532d1848 421 SUPERFAMILY SSF81301 7 159 8.17E-39 T 15-10-2018 D934_01925 77f6f18dd61c3d8cf045607d532d1848 421 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 3 419 36.058 T 15-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 D934_01925 77f6f18dd61c3d8cf045607d532d1848 421 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 189 251 6.1E-21 T 15-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 D934_01925 77f6f18dd61c3d8cf045607d532d1848 421 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 4 394 7.1E-144 T 15-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 D934_01925 77f6f18dd61c3d8cf045607d532d1848 421 Gene3D G3DSA:3.30.460.10 1 158 1.7E-57 T 15-10-2018 D934_01925 77f6f18dd61c3d8cf045607d532d1848 421 Pfam PF01743 Poly A polymerase head domain 35 162 1.1E-35 T 15-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 Gene3D G3DSA:1.25.40.20 591 803 3.5E-29 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 PRINTS PR01415 Ankyrin repeat signature 440 455 9.2E-5 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 PRINTS PR01415 Ankyrin repeat signature 862 876 9.2E-5 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 Pfam PF12796 Ankyrin repeats (3 copies) 697 778 3.2E-7 T 15-10-2018 IPR020683 Ankyrin repeat-containing domain D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 Pfam PF12796 Ankyrin repeats (3 copies) 821 904 3.0E-10 T 15-10-2018 IPR020683 Ankyrin repeat-containing domain D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 Pfam PF12796 Ankyrin repeats (3 copies) 319 399 1.3E-9 T 15-10-2018 IPR020683 Ankyrin repeat-containing domain D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 Pfam PF12796 Ankyrin repeats (3 copies) 421 498 6.2E-10 T 15-10-2018 IPR020683 Ankyrin repeat-containing domain D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 Gene3D G3DSA:1.25.40.20 226 418 2.4E-32 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 945 982 200.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 472 501 0.46 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 715 744 660.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 748 777 0.026 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 373 402 5.6 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 272 301 1100.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 403 435 610.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 912 941 0.43 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 1030 1059 0.082 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 439 468 2.5E-4 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 340 369 0.092 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 505 536 580.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 846 875 0.026 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 304 336 12.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 235 264 460.0 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SMART SM00248 879 908 3.7 T 15-10-2018 IPR002110 Ankyrin repeat GO:0005515 D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 Gene3D G3DSA:1.25.40.20 419 563 1.6E-28 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SUPERFAMILY SSF48403 691 1083 3.9E-57 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 Gene3D G3DSA:1.25.40.20 961 1092 1.5E-14 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 SUPERFAMILY SSF48403 240 517 1.87E-51 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily D934_06960 38419e1cfb125601f2ce45b5a72100c2 1101 Gene3D G3DSA:1.25.40.20 812 960 6.4E-34 T 15-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily D934_10975 5b4e5334e3f483d4fc74e1d12a24ef0b 87 SUPERFAMILY SSF54285 4 73 8.63E-15 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp D934_10975 5b4e5334e3f483d4fc74e1d12a24ef0b 87 Gene3D G3DSA:3.10.20.280 1 83 6.0E-19 T 15-10-2018 IPR037021 RnfH superfamily D934_10975 5b4e5334e3f483d4fc74e1d12a24ef0b 87 Pfam PF03658 RnfH family Ubiquitin 4 81 1.5E-18 T 15-10-2018 IPR005346 RnfH protein D934_10975 5b4e5334e3f483d4fc74e1d12a24ef0b 87 Hamap MF_00460 Protein RnfH [rnfH]. 4 87 18.622 T 15-10-2018 IPR005346 RnfH protein D934_02630 634cb9e2fd60f7462c5bba8345232c18 283 Pfam PF13622 Thioesterase-like superfamily 17 272 8.1E-59 T 15-10-2018 D934_02630 634cb9e2fd60f7462c5bba8345232c18 283 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 2 273 1.8E-89 T 15-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 D934_02630 634cb9e2fd60f7462c5bba8345232c18 283 Gene3D G3DSA:3.10.129.90 1 276 1.1E-95 T 15-10-2018 D934_02630 634cb9e2fd60f7462c5bba8345232c18 283 SUPERFAMILY SSF54637 106 273 4.11E-50 T 15-10-2018 IPR029069 HotDog domain superfamily D934_02630 634cb9e2fd60f7462c5bba8345232c18 283 SUPERFAMILY SSF54637 2 104 9.6E-37 T 15-10-2018 IPR029069 HotDog domain superfamily D934_11220 c4c23342716d99905b7718e22d4d459d 909 Pfam PF13091 PLD-like domain 758 892 5.2E-12 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 D934_11220 c4c23342716d99905b7718e22d4d459d 909 Gene3D G3DSA:3.40.50.300 521 723 2.2E-32 T 15-10-2018 D934_11220 c4c23342716d99905b7718e22d4d459d 909 Gene3D G3DSA:3.40.50.300 321 493 5.2E-7 T 15-10-2018 D934_11220 c4c23342716d99905b7718e22d4d459d 909 Gene3D G3DSA:3.40.50.300 1 213 8.8E-11 T 15-10-2018 D934_11220 c4c23342716d99905b7718e22d4d459d 909 Gene3D G3DSA:3.30.870.10 730 897 3.1E-19 T 15-10-2018 D934_11220 c4c23342716d99905b7718e22d4d459d 909 Pfam PF13086 AAA domain 5 136 1.5E-6 T 15-10-2018 D934_11220 c4c23342716d99905b7718e22d4d459d 909 SUPERFAMILY SSF56024 731 892 1.95E-18 T 15-10-2018 D934_11220 c4c23342716d99905b7718e22d4d459d 909 Pfam PF13087 AAA domain 511 701 1.6E-22 T 15-10-2018 D934_11220 c4c23342716d99905b7718e22d4d459d 909 SUPERFAMILY SSF52540 4 698 1.22E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 SUPERFAMILY SSF50249 314 723 2.23E-136 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 Pfam PF00575 S1 RNA binding domain 724 803 2.5E-12 T 15-10-2018 IPR003029 S1 domain GO:0003676 D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 Gene3D G3DSA:2.40.50.140 727 833 5.9E-22 T 15-10-2018 D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 168 806 4.0E-210 T 15-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 SMART SM00357 175 234 1.0E-14 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 SUPERFAMILY SSF50249 156 236 1.32E-18 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 SMART SM00316 723 806 6.1E-14 T 15-10-2018 IPR022967 RNA-binding domain, S1 D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 TIGRFAM TIGR02063 RNase_R: ribonuclease R 110 807 1.1E-267 T 15-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 Pfam PF00773 RNB domain 349 676 7.3E-105 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 Hamap MF_01895 Ribonuclease R [rnr]. 129 806 56.545 T 15-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 SMART SM00955 349 677 1.2E-175 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 SUPERFAMILY SSF50249 227 326 3.04E-12 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 ProSitePatterns PS01175 Ribonuclease II family signature. 644 668 - T 15-10-2018 IPR022966 Ribonuclease II/R, conserved site D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 Gene3D G3DSA:2.40.50.140 166 237 1.2E-19 T 15-10-2018 D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 Pfam PF08206 Ribonuclease B OB domain 176 233 7.2E-24 T 15-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain D934_09870 7cd3081bdd4d98b774e9e1b96d4e25e7 838 SUPERFAMILY SSF50249 725 805 4.85E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_07070 d63de8a6c8763e75a829f7a7a0aa18c5 214 Pfam PF02498 BRO family, N-terminal domain 17 108 1.6E-6 T 15-10-2018 IPR003497 BRO N-terminal domain D934_07070 d63de8a6c8763e75a829f7a7a0aa18c5 214 SMART SM01040 14 111 3.3E-17 T 15-10-2018 IPR003497 BRO N-terminal domain D934_06910 dfd098544b850525f15e9ba5fc694a5a 376 Gene3D G3DSA:3.30.450.90 2 102 2.8E-31 T 15-10-2018 D934_06910 dfd098544b850525f15e9ba5fc694a5a 376 SUPERFAMILY SSF52540 8 341 3.23E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_06910 dfd098544b850525f15e9ba5fc694a5a 376 Pfam PF00437 Type II/IV secretion system protein 80 272 3.7E-35 T 15-10-2018 IPR001482 Type II/IV secretion system protein D934_06910 dfd098544b850525f15e9ba5fc694a5a 376 Gene3D G3DSA:3.40.50.300 104 361 1.2E-86 T 15-10-2018 D934_06910 dfd098544b850525f15e9ba5fc694a5a 376 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 347 4.7E-133 T 15-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 D934_07005 3d7ef172046cbfc4a4ff908e0f03eb66 412 Pfam PF02498 BRO family, N-terminal domain 174 260 2.1E-23 T 15-10-2018 IPR003497 BRO N-terminal domain D934_07005 3d7ef172046cbfc4a4ff908e0f03eb66 412 Pfam PF02498 BRO family, N-terminal domain 42 129 1.7E-18 T 15-10-2018 IPR003497 BRO N-terminal domain D934_07005 3d7ef172046cbfc4a4ff908e0f03eb66 412 SMART SM01040 173 260 4.3E-37 T 15-10-2018 IPR003497 BRO N-terminal domain D934_07005 3d7ef172046cbfc4a4ff908e0f03eb66 412 SMART SM01040 41 129 1.7E-25 T 15-10-2018 IPR003497 BRO N-terminal domain D934_10210 662796704fbf7b7873ecb2eac6411d1e 295 Pfam PF08241 Methyltransferase domain 51 147 8.2E-20 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 D934_10210 662796704fbf7b7873ecb2eac6411d1e 295 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 5 265 29.698 T 15-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 D934_10210 662796704fbf7b7873ecb2eac6411d1e 295 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 13 264 4.4E-69 T 15-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 D934_10210 662796704fbf7b7873ecb2eac6411d1e 295 Gene3D G3DSA:3.40.50.150 11 177 3.3E-33 T 15-10-2018 D934_10210 662796704fbf7b7873ecb2eac6411d1e 295 SUPERFAMILY SSF53335 10 215 9.36E-38 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_12005 57abd230df810cf9de0accc5e23df227 264 Gene3D G3DSA:3.30.2010.10 163 258 1.1E-15 T 15-10-2018 D934_12005 57abd230df810cf9de0accc5e23df227 264 Pfam PF01863 Protein of unknown function DUF45 44 246 8.0E-51 T 15-10-2018 IPR002725 Protein of unknown function DUF45 D934_09740 3926005146bdf780a1c551843f84e451 314 Gene3D G3DSA:3.30.1490.20 138 202 4.3E-105 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D934_09740 3926005146bdf780a1c551843f84e451 314 Gene3D G3DSA:3.30.470.20 116 296 4.3E-105 T 15-10-2018 D934_09740 3926005146bdf780a1c551843f84e451 314 SUPERFAMILY SSF56059 124 311 1.72E-51 T 15-10-2018 D934_09740 3926005146bdf780a1c551843f84e451 314 SUPERFAMILY SSF52440 3 122 3.74E-36 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D934_09740 3926005146bdf780a1c551843f84e451 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 312 9.1E-145 T 15-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 D934_09740 3926005146bdf780a1c551843f84e451 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 7.8E-73 T 15-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 D934_09740 3926005146bdf780a1c551843f84e451 314 Gene3D G3DSA:3.40.50.20 8 115 4.3E-105 T 15-10-2018 D934_09740 3926005146bdf780a1c551843f84e451 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 3.0E-37 T 15-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 D934_09740 3926005146bdf780a1c551843f84e451 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 146.066 T 15-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 D934_09460 de7401d82df6e78b5560fd4f2119b926 257 Pfam PF01618 MotA/TolQ/ExbB proton channel family 109 239 5.0E-37 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel D934_09460 de7401d82df6e78b5560fd4f2119b926 257 TIGRFAM TIGR02796 tolQ: protein TolQ 36 251 1.4E-85 T 15-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 D934_09460 de7401d82df6e78b5560fd4f2119b926 257 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 35 256 39.073 T 15-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 D934_04460 56b1ad6f3f037b62e2e53f75375be582 106 SUPERFAMILY SSF47413 32 90 7.31E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_04460 56b1ad6f3f037b62e2e53f75375be582 106 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 32 94 3.1E-23 T 15-10-2018 IPR031856 Putative bacterial antitoxin YdaS D934_04460 56b1ad6f3f037b62e2e53f75375be582 106 Gene3D G3DSA:1.10.260.40 29 106 1.0E-30 T 15-10-2018 D934_02695 24c5f701a221afaac89c58da5f954a59 385 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 383 43.03 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 D934_02695 24c5f701a221afaac89c58da5f954a59 385 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 2 380 4.3E-115 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 D934_02695 24c5f701a221afaac89c58da5f954a59 385 SUPERFAMILY SSF53756 6 384 7.68E-32 T 15-10-2018 D934_02695 24c5f701a221afaac89c58da5f954a59 385 Pfam PF02684 Lipid-A-disaccharide synthetase 7 379 3.5E-113 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 D934_04545 863b83f7516a10ced77169c02098d916 642 Gene3D G3DSA:2.60.40.10 408 506 1.8E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold D934_04545 863b83f7516a10ced77169c02098d916 642 Pfam PF11134 Phage stabilisation protein 74 279 3.3E-6 T 15-10-2018 IPR021098 Bacteriophage P22, Gp10, DNA-stabilising D934_04545 863b83f7516a10ced77169c02098d916 642 SUPERFAMILY SSF63825 192 358 3.4E-5 T 15-10-2018 D934_07140 863b83f7516a10ced77169c02098d916 642 Gene3D G3DSA:2.60.40.10 408 506 1.8E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold D934_07140 863b83f7516a10ced77169c02098d916 642 Pfam PF11134 Phage stabilisation protein 74 279 3.3E-6 T 15-10-2018 IPR021098 Bacteriophage P22, Gp10, DNA-stabilising D934_07140 863b83f7516a10ced77169c02098d916 642 SUPERFAMILY SSF63825 192 358 3.4E-5 T 15-10-2018 D934_07485 37c5580cdb134ed9eae097541314120b 552 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 444 5.8E-179 T 15-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 D934_07485 37c5580cdb134ed9eae097541314120b 552 Pfam PF03109 ABC1 family 110 227 1.2E-32 T 15-10-2018 IPR004147 UbiB domain D934_07485 37c5580cdb134ed9eae097541314120b 552 SUPERFAMILY SSF56112 92 434 3.93E-34 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily D934_07485 37c5580cdb134ed9eae097541314120b 552 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 549 50.519 T 15-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 D934_04735 b6ace2ea34bbfbd196babbebcdb194b6 425 SUPERFAMILY SSF55205 1 424 4.45E-137 T 15-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 D934_04735 b6ace2ea34bbfbd196babbebcdb194b6 425 Gene3D G3DSA:3.65.10.10 21 236 1.4E-164 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 D934_04735 b6ace2ea34bbfbd196babbebcdb194b6 425 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 414 4.8E-108 T 15-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 D934_04735 b6ace2ea34bbfbd196babbebcdb194b6 425 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 424 44.56 T 15-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_04735 b6ace2ea34bbfbd196babbebcdb194b6 425 Gene3D G3DSA:3.65.10.10 6 421 1.4E-164 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 D934_04735 b6ace2ea34bbfbd196babbebcdb194b6 425 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 423 8.6E-173 T 15-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13420 c6aebce1f4359295658cebc6706366f6 154 Gene3D G3DSA:3.30.110.10 59 154 3.1E-36 T 15-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 D934_13420 c6aebce1f4359295658cebc6706366f6 154 SUPERFAMILY SSF55200 66 153 4.45E-30 T 15-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 D934_13420 c6aebce1f4359295658cebc6706366f6 154 SUPERFAMILY SSF54364 1 61 1.31E-23 T 15-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D934_13420 c6aebce1f4359295658cebc6706366f6 154 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 153 1.1E-59 T 15-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D934_13420 c6aebce1f4359295658cebc6706366f6 154 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 153 26.213 T 15-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D934_13420 c6aebce1f4359295658cebc6706366f6 154 Gene3D G3DSA:3.10.20.80 1 58 6.2E-26 T 15-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D934_13420 c6aebce1f4359295658cebc6706366f6 154 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 59 7.9E-24 T 15-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D934_13420 c6aebce1f4359295658cebc6706366f6 154 ProSitePatterns PS00938 Initiation factor 3 signature. 41 54 - T 15-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 D934_13420 c6aebce1f4359295658cebc6706366f6 154 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 66 150 2.6E-35 T 15-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 D934_12600 f3b2fbb8c09f340dd9fa7bb4c1a15783 178 Gene3D G3DSA:3.90.80.10 1 175 2.6E-69 T 15-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 D934_12600 f3b2fbb8c09f340dd9fa7bb4c1a15783 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.177 T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 D934_12600 f3b2fbb8c09f340dd9fa7bb4c1a15783 178 SUPERFAMILY SSF50324 6 175 2.22E-67 T 15-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 D934_12600 f3b2fbb8c09f340dd9fa7bb4c1a15783 178 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 D934_12600 f3b2fbb8c09f340dd9fa7bb4c1a15783 178 Pfam PF00719 Inorganic pyrophosphatase 18 174 1.8E-53 T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 D934_04205 e1f6a924d14287268c82d115b78da9f6 319 SUPERFAMILY SSF161098 36 303 1.78E-49 T 15-10-2018 IPR035906 MetI-like superfamily D934_04205 e1f6a924d14287268c82d115b78da9f6 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 308 7.2E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D934_04205 e1f6a924d14287268c82d115b78da9f6 319 Gene3D G3DSA:1.10.3720.10 37 309 1.4E-56 T 15-10-2018 IPR035906 MetI-like superfamily D934_04205 e1f6a924d14287268c82d115b78da9f6 319 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 36 308 1.1E-84 T 15-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 D934_04205 e1f6a924d14287268c82d115b78da9f6 319 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 37 310 1.1E-125 T 15-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 D934_01775 0acfe820b5c282cf28042429130f124a 485 SUPERFAMILY SSF53383 26 479 3.48E-122 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D934_01775 0acfe820b5c282cf28042429130f124a 485 Pfam PF00202 Aminotransferase class-III 46 476 2.0E-114 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D934_01775 0acfe820b5c282cf28042429130f124a 485 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 31 478 4.9E-161 T 15-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 D934_01775 0acfe820b5c282cf28042429130f124a 485 Gene3D G3DSA:3.40.640.10 82 376 3.4E-151 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D934_01775 0acfe820b5c282cf28042429130f124a 485 Gene3D G3DSA:3.90.1150.10 27 468 3.4E-151 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D934_01775 0acfe820b5c282cf28042429130f124a 485 PIRSF PIRSF000521 47 453 1.3E-24 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D934_11390 e3e227094e549d44e1f895637f896872 295 Gene3D G3DSA:3.60.110.10 3 295 4.6E-94 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D934_11390 e3e227094e549d44e1f895637f896872 295 SUPERFAMILY SSF56317 6 292 5.36E-85 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D934_11390 e3e227094e549d44e1f895637f896872 295 Pfam PF00795 Carbon-nitrogen hydrolase 8 272 2.1E-54 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 D934_11995 6a1e21423888a8bdcf5f911b9e25c00d 299 SUPERFAMILY SSF52402 26 245 2.65E-54 T 15-10-2018 D934_11995 6a1e21423888a8bdcf5f911b9e25c00d 299 PIRSF PIRSF004976 3 292 3.2E-70 T 15-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 D934_11995 6a1e21423888a8bdcf5f911b9e25c00d 299 Gene3D G3DSA:3.40.50.620 8 278 2.2E-47 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_11995 6a1e21423888a8bdcf5f911b9e25c00d 299 Pfam PF01171 PP-loop family 50 213 3.9E-16 T 15-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 D934_11995 6a1e21423888a8bdcf5f911b9e25c00d 299 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 16 280 55.03 T 15-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 585 32.765 T 15-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 Gene3D G3DSA:2.40.50.140 1 114 7.3E-30 T 15-10-2018 D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 Pfam PF01336 OB-fold nucleic acid binding domain 18 105 1.1E-13 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 SUPERFAMILY SSF55681 115 582 1.55E-103 T 15-10-2018 D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 SUPERFAMILY SSF55261 293 420 4.8E-37 T 15-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 1.3E-226 T 15-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 Pfam PF02938 GAD domain 311 405 1.9E-23 T 15-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 6.3E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 6.3E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 6.3E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 6.3E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 Gene3D G3DSA:3.30.1360.30 275 420 1.1E-187 T 15-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 Gene3D G3DSA:3.30.930.10 120 582 1.1E-187 T 15-10-2018 D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 SUPERFAMILY SSF50249 1 112 1.2E-28 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_07630 8cb36e75696c877ce263fca7aeb6da2b 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 1.1E-106 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_02355 8ddec2bd0e578afe38696a604e349158 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 88 113 2.0E-45 T 15-10-2018 D934_02355 8ddec2bd0e578afe38696a604e349158 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 253 274 2.0E-45 T 15-10-2018 D934_02355 8ddec2bd0e578afe38696a604e349158 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 452 471 2.0E-45 T 15-10-2018 D934_02355 8ddec2bd0e578afe38696a604e349158 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 275 301 2.0E-45 T 15-10-2018 D934_02355 8ddec2bd0e578afe38696a604e349158 713 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 343 355 2.0E-45 T 15-10-2018 D934_02355 8ddec2bd0e578afe38696a604e349158 713 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 708 2.8E-228 T 15-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02355 8ddec2bd0e578afe38696a604e349158 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 386 408 3.7E-10 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 D934_02355 8ddec2bd0e578afe38696a604e349158 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 90 110 3.7E-10 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 D934_02355 8ddec2bd0e578afe38696a604e349158 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 511 532 3.7E-10 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 D934_02355 8ddec2bd0e578afe38696a604e349158 713 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 64 88 3.7E-10 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 D934_02355 8ddec2bd0e578afe38696a604e349158 713 Pfam PF00361 Proton-conducting membrane transporter 139 434 7.8E-86 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02355 8ddec2bd0e578afe38696a604e349158 713 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 127 4.7E-25 T 15-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_13080 00c704dfb1bf77374eea035b571859c5 500 Gene3D G3DSA:3.40.50.1260 274 487 2.2E-142 T 15-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13080 00c704dfb1bf77374eea035b571859c5 500 PRINTS PR00477 Phosphoglycerate kinase family signature 241 263 6.2E-78 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13080 00c704dfb1bf77374eea035b571859c5 500 PRINTS PR00477 Phosphoglycerate kinase family signature 140 162 6.2E-78 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13080 00c704dfb1bf77374eea035b571859c5 500 PRINTS PR00477 Phosphoglycerate kinase family signature 213 228 6.2E-78 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13080 00c704dfb1bf77374eea035b571859c5 500 PRINTS PR00477 Phosphoglycerate kinase family signature 295 314 6.2E-78 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13080 00c704dfb1bf77374eea035b571859c5 500 PRINTS PR00477 Phosphoglycerate kinase family signature 417 442 6.2E-78 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13080 00c704dfb1bf77374eea035b571859c5 500 PRINTS PR00477 Phosphoglycerate kinase family signature 450 461 6.2E-78 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13080 00c704dfb1bf77374eea035b571859c5 500 PRINTS PR00477 Phosphoglycerate kinase family signature 272 294 6.2E-78 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13080 00c704dfb1bf77374eea035b571859c5 500 PRINTS PR00477 Phosphoglycerate kinase family signature 119 135 6.2E-78 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13080 00c704dfb1bf77374eea035b571859c5 500 PRINTS PR00477 Phosphoglycerate kinase family signature 473 490 6.2E-78 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13080 00c704dfb1bf77374eea035b571859c5 500 Gene3D G3DSA:3.40.50.1260 117 495 2.2E-142 T 15-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13080 00c704dfb1bf77374eea035b571859c5 500 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 124 134 - T 15-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13080 00c704dfb1bf77374eea035b571859c5 500 Pfam PF00162 Phosphoglycerate kinase 115 487 1.4E-136 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13080 00c704dfb1bf77374eea035b571859c5 500 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 115 497 38.155 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13080 00c704dfb1bf77374eea035b571859c5 500 SUPERFAMILY SSF53748 112 496 4.12E-141 T 15-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D934_13665 69cb8b6388e24d4b83315a33ddc75f5b 266 Gene3D G3DSA:1.10.287.610 103 150 3.5E-86 T 15-10-2018 D934_13665 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.8E-34 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_13665 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.8E-34 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_13665 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.8E-34 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_13665 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.8E-34 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_13665 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.8E-34 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_13665 69cb8b6388e24d4b83315a33ddc75f5b 266 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.8E-34 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_13665 69cb8b6388e24d4b83315a33ddc75f5b 266 Pfam PF00318 Ribosomal protein S2 9 224 1.9E-88 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_13665 69cb8b6388e24d4b83315a33ddc75f5b 266 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 15-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 D934_13665 69cb8b6388e24d4b83315a33ddc75f5b 266 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 39.201 T 15-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13665 69cb8b6388e24d4b83315a33ddc75f5b 266 Gene3D G3DSA:3.40.50.10490 8 219 3.5E-86 T 15-10-2018 D934_13665 69cb8b6388e24d4b83315a33ddc75f5b 266 SUPERFAMILY SSF52313 6 231 6.67E-89 T 15-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily D934_13665 69cb8b6388e24d4b83315a33ddc75f5b 266 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 3.5E-96 T 15-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13665 69cb8b6388e24d4b83315a33ddc75f5b 266 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 15-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 D934_00045 cf346498c62df2c59ed78c66118d8b88 101 SUPERFAMILY SSF52833 8 97 2.16E-26 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_00045 cf346498c62df2c59ed78c66118d8b88 101 Pfam PF00462 Glutaredoxin 16 75 5.8E-16 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 D934_00045 cf346498c62df2c59ed78c66118d8b88 101 ProSitePatterns PS00195 Glutaredoxin active site. 18 34 - T 15-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 D934_00045 cf346498c62df2c59ed78c66118d8b88 101 Gene3D G3DSA:3.40.30.10 14 100 6.3E-26 T 15-10-2018 D934_00045 cf346498c62df2c59ed78c66118d8b88 101 PRINTS PR00160 Glutaredoxin signature 72 85 3.6E-12 T 15-10-2018 IPR014025 Glutaredoxin subgroup D934_00045 cf346498c62df2c59ed78c66118d8b88 101 PRINTS PR00160 Glutaredoxin signature 16 34 3.6E-12 T 15-10-2018 IPR014025 Glutaredoxin subgroup D934_00045 cf346498c62df2c59ed78c66118d8b88 101 PRINTS PR00160 Glutaredoxin signature 58 71 3.6E-12 T 15-10-2018 IPR014025 Glutaredoxin subgroup D934_00045 cf346498c62df2c59ed78c66118d8b88 101 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 16 94 2.9E-33 T 15-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 D934_03375 4924bc3d902e5cdf0249df57ec95a1d9 110 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 8 102 19.89 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03375 4924bc3d902e5cdf0249df57ec95a1d9 110 SUPERFAMILY SSF50104 9 107 3.37E-29 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily D934_03375 4924bc3d902e5cdf0249df57ec95a1d9 110 SMART SM00739 9 36 2.8E-7 T 15-10-2018 IPR005824 KOW D934_03375 4924bc3d902e5cdf0249df57ec95a1d9 110 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 8 108 6.9E-34 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03375 4924bc3d902e5cdf0249df57ec95a1d9 110 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 43 108 8.5E-22 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03375 4924bc3d902e5cdf0249df57ec95a1d9 110 Gene3D G3DSA:2.30.30.30 7 109 2.5E-33 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 D934_03375 4924bc3d902e5cdf0249df57ec95a1d9 110 Pfam PF00467 KOW motif 12 40 5.5E-8 T 15-10-2018 IPR005824 KOW D934_03375 4924bc3d902e5cdf0249df57ec95a1d9 110 ProSitePatterns PS01108 Ribosomal protein L24 signature. 13 30 - T 15-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_04480 c78ac3e9e2cffbe614e69c88ee9c1caf 824 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 459 781 1.1E-76 T 15-10-2018 IPR006500 DNA primase, phage/plasmid D934_04480 c78ac3e9e2cffbe614e69c88ee9c1caf 824 Pfam PF08706 D5 N terminal like 353 509 1.9E-28 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D934_04480 c78ac3e9e2cffbe614e69c88ee9c1caf 824 SUPERFAMILY SSF52540 533 678 3.65E-9 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04480 c78ac3e9e2cffbe614e69c88ee9c1caf 824 Gene3D G3DSA:3.40.50.300 506 682 3.4E-7 T 15-10-2018 D934_04480 c78ac3e9e2cffbe614e69c88ee9c1caf 824 SMART SM00885 351 510 8.5E-35 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D934_03015 f4a5421fc6f895abb13922f775433632 188 SMART SM00487 2 180 0.0062 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D934_03015 f4a5421fc6f895abb13922f775433632 188 Gene3D G3DSA:3.40.50.300 1 156 1.3E-17 T 15-10-2018 D934_03015 f4a5421fc6f895abb13922f775433632 188 Pfam PF00176 SNF2 family N-terminal domain 25 131 3.1E-9 T 15-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 D934_03015 f4a5421fc6f895abb13922f775433632 188 SUPERFAMILY SSF52540 2 137 2.26E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Gene3D G3DSA:2.150.10.10 578 704 7.7E-22 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 SUPERFAMILY SSF101967 408 553 3.27E-25 T 15-10-2018 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Gene3D G3DSA:3.30.1300.30 894 1003 1.6E-15 T 15-10-2018 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Pfam PF05658 Head domain of trimeric autotransporter adhesin 654 679 3.4E-5 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Pfam PF05658 Head domain of trimeric autotransporter adhesin 623 649 8.4E-6 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Pfam PF05658 Head domain of trimeric autotransporter adhesin 411 436 1.4E-4 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Pfam PF05658 Head domain of trimeric autotransporter adhesin 140 165 8.3E-5 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Pfam PF05658 Head domain of trimeric autotransporter adhesin 483 508 9.3E-5 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Pfam PF05658 Head domain of trimeric autotransporter adhesin 111 135 2.3E-7 T 15-10-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 SUPERFAMILY SSF101967 109 209 6.93E-20 T 15-10-2018 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 SUPERFAMILY SSF101967 579 727 3.4E-26 T 15-10-2018 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 187 223 1.7E-4 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 531 570 7.5E-5 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 360 399 7.5E-5 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 702 742 1.1E-7 T 15-10-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 SUPERFAMILY SSF54523 912 1003 2.35E-11 T 15-10-2018 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 SUPERFAMILY SSF101967 233 382 5.23E-25 T 15-10-2018 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Gene3D G3DSA:2.150.10.10 391 563 3.1E-29 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Gene3D G3DSA:2.150.10.10 54 217 8.9E-26 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Gene3D G3DSA:2.150.10.10 218 390 1.9E-27 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Gene3D G3DSA:1.20.5.170 705 792 1.6E-15 T 15-10-2018 D934_10495 b160ba72b45bf4afcbb2effe88d4ab0b 1003 Pfam PF03895 YadA-like membrane anchor domain 951 1003 2.3E-9 T 15-10-2018 IPR005594 YadA-like, C-terminal D934_09995 48e0dc66f941ca728eb1106f46514bae 155 Pfam PF01878 EVE domain 6 153 1.6E-53 T 15-10-2018 IPR002740 EVE domain D934_09995 48e0dc66f941ca728eb1106f46514bae 155 Gene3D G3DSA:3.10.590.10 1 155 1.6E-62 T 15-10-2018 D934_09995 48e0dc66f941ca728eb1106f46514bae 155 SUPERFAMILY SSF88697 2 154 7.04E-59 T 15-10-2018 IPR015947 PUA-like superfamily D934_10905 02499ddb502f159ef01ec02f044f53a7 513 SUPERFAMILY SSF53474 93 470 1.54E-28 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_10905 02499ddb502f159ef01ec02f044f53a7 513 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 103 111 1.9E-5 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 D934_10905 02499ddb502f159ef01ec02f044f53a7 513 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 134 145 1.9E-5 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 D934_10905 02499ddb502f159ef01ec02f044f53a7 513 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 214 228 1.9E-5 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 D934_10905 02499ddb502f159ef01ec02f044f53a7 513 Pfam PF08386 TAP-like protein 396 495 1.1E-19 T 15-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal D934_10905 02499ddb502f159ef01ec02f044f53a7 513 Pfam PF00561 alpha/beta hydrolase fold 102 329 3.5E-16 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D934_01275 5722bc01e22f60f70a7eff3b2e10c6a4 435 Pfam PF00083 Sugar (and other) transporter 23 221 3.1E-24 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 D934_01275 5722bc01e22f60f70a7eff3b2e10c6a4 435 Pfam PF00083 Sugar (and other) transporter 224 420 1.3E-9 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 D934_01275 5722bc01e22f60f70a7eff3b2e10c6a4 435 SUPERFAMILY SSF103473 17 427 3.4E-62 T 15-10-2018 IPR036259 MFS transporter superfamily D934_01275 5722bc01e22f60f70a7eff3b2e10c6a4 435 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D934_01275 5722bc01e22f60f70a7eff3b2e10c6a4 435 Gene3D G3DSA:1.20.1250.20 20 430 1.2E-61 T 15-10-2018 D934_01825 95d7022b11c1cc2019124eb6ebf35253 319 Gene3D G3DSA:3.90.226.10 1 318 9.3E-113 T 15-10-2018 D934_01825 95d7022b11c1cc2019124eb6ebf35253 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 5.9E-45 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_01825 95d7022b11c1cc2019124eb6ebf35253 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 5.9E-45 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_01825 95d7022b11c1cc2019124eb6ebf35253 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 5.9E-45 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_01825 95d7022b11c1cc2019124eb6ebf35253 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 5.9E-45 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_01825 95d7022b11c1cc2019124eb6ebf35253 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 5.9E-45 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_01825 95d7022b11c1cc2019124eb6ebf35253 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 5.9E-45 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_01825 95d7022b11c1cc2019124eb6ebf35253 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 316 8.5E-148 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_01825 95d7022b11c1cc2019124eb6ebf35253 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 4.0E-61 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_01825 95d7022b11c1cc2019124eb6ebf35253 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 49.109 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D934_01825 95d7022b11c1cc2019124eb6ebf35253 319 SUPERFAMILY SSF52096 5 316 1.72E-95 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D934_03970 2493b807baec1768d983353415e81939 548 SUPERFAMILY SSF54862 448 547 4.19E-24 T 15-10-2018 D934_03970 2493b807baec1768d983353415e81939 548 SUPERFAMILY SSF51905 13 389 2.34E-44 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_03970 2493b807baec1768d983353415e81939 548 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 447 546 7.2E-43 T 15-10-2018 D934_03970 2493b807baec1768d983353415e81939 548 Gene3D G3DSA:3.50.50.60 19 384 1.4E-158 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_03970 2493b807baec1768d983353415e81939 548 SUPERFAMILY SSF54373 216 310 1.45E-30 T 15-10-2018 D934_03970 2493b807baec1768d983353415e81939 548 Pfam PF01946 Thi4 family 16 63 1.2E-7 T 15-10-2018 D934_03970 2493b807baec1768d983353415e81939 548 Gene3D G3DSA:3.30.9.90 87 435 1.4E-158 T 15-10-2018 D934_03970 2493b807baec1768d983353415e81939 548 Gene3D G3DSA:3.30.70.20 447 543 3.7E-34 T 15-10-2018 D934_06225 d6f455fa081b1c9d888da3437fc7f17d 155 Pfam PF07603 Protein of unknown function (DUF1566) 29 139 7.0E-10 T 15-10-2018 IPR011460 Protein of unknown function DUF1566 D934_03955 8fff0693e0a4fb7c4a006ffddc1bf53a 185 SUPERFAMILY SSF160443 100 182 9.15E-17 T 15-10-2018 IPR036063 Smr domain superfamily D934_03955 8fff0693e0a4fb7c4a006ffddc1bf53a 185 Pfam PF01713 Smr domain 102 182 1.9E-20 T 15-10-2018 IPR002625 Smr domain D934_03955 8fff0693e0a4fb7c4a006ffddc1bf53a 185 SMART SM00463 99 183 2.9E-17 T 15-10-2018 IPR002625 Smr domain D934_03955 8fff0693e0a4fb7c4a006ffddc1bf53a 185 Gene3D G3DSA:3.30.1370.110 50 185 1.4E-37 T 15-10-2018 D934_12725 0a0b5414e66c4d7300d43a456912a1d2 934 Pfam PF13332 Haemagluttinin repeat 48 219 1.9E-42 T 15-10-2018 IPR025157 Hemagglutinin repeat D934_12725 0a0b5414e66c4d7300d43a456912a1d2 934 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 725 880 5.2E-33 T 15-10-2018 IPR008487 Protein of unknown function DUF769 D934_11325 7f653ba6eecb8de19763eaa551081b6e 485 Gene3D G3DSA:3.20.20.70 1 484 3.6E-206 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_11325 7f653ba6eecb8de19763eaa551081b6e 485 PIRSF PIRSF000130 1 485 5.7E-200 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 D934_11325 7f653ba6eecb8de19763eaa551081b6e 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 452 3.2E-185 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 D934_11325 7f653ba6eecb8de19763eaa551081b6e 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 471 6.7E-156 T 15-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 D934_11325 7f653ba6eecb8de19763eaa551081b6e 485 SMART SM00116 96 143 1.1E-11 T 15-10-2018 IPR000644 CBS domain D934_11325 7f653ba6eecb8de19763eaa551081b6e 485 SMART SM00116 157 205 4.1E-7 T 15-10-2018 IPR000644 CBS domain D934_11325 7f653ba6eecb8de19763eaa551081b6e 485 Pfam PF00571 CBS domain 95 139 5.2E-11 T 15-10-2018 IPR000644 CBS domain D934_11325 7f653ba6eecb8de19763eaa551081b6e 485 Pfam PF00571 CBS domain 148 202 1.0E-5 T 15-10-2018 IPR000644 CBS domain D934_11325 7f653ba6eecb8de19763eaa551081b6e 485 SUPERFAMILY SSF51412 2 475 3.27E-124 T 15-10-2018 D934_11325 7f653ba6eecb8de19763eaa551081b6e 485 SMART SM01240 7 471 0.0 T 15-10-2018 D934_11325 7f653ba6eecb8de19763eaa551081b6e 485 SUPERFAMILY SSF54631 94 202 1.89E-27 T 15-10-2018 D934_11325 7f653ba6eecb8de19763eaa551081b6e 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 15-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 D934_11325 7f653ba6eecb8de19763eaa551081b6e 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 484 80.292 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 D934_07475 4b081339978d17a01062a1c3555884d0 283 PIRSF PIRSF036480 2 283 5.2E-108 T 15-10-2018 D934_07475 4b081339978d17a01062a1c3555884d0 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 9.8E-53 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D934_07475 4b081339978d17a01062a1c3555884d0 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 9.8E-53 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D934_07475 4b081339978d17a01062a1c3555884d0 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 9.8E-53 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D934_07475 4b081339978d17a01062a1c3555884d0 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 9.8E-53 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D934_07475 4b081339978d17a01062a1c3555884d0 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 9.8E-53 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D934_07475 4b081339978d17a01062a1c3555884d0 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 9.8E-53 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D934_07475 4b081339978d17a01062a1c3555884d0 283 SUPERFAMILY SSF53328 88 283 4.32E-60 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D934_07475 4b081339978d17a01062a1c3555884d0 283 Pfam PF13740 ACT domain 6 78 3.9E-6 T 15-10-2018 D934_07475 4b081339978d17a01062a1c3555884d0 283 Gene3D G3DSA:3.40.50.170 87 282 3.9E-69 T 15-10-2018 D934_07475 4b081339978d17a01062a1c3555884d0 283 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 282 9.0E-101 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D934_07475 4b081339978d17a01062a1c3555884d0 283 Gene3D G3DSA:3.30.70.260 1 86 2.8E-26 T 15-10-2018 D934_07475 4b081339978d17a01062a1c3555884d0 283 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 282 46.855 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D934_07475 4b081339978d17a01062a1c3555884d0 283 SUPERFAMILY SSF55021 2 86 3.58E-18 T 15-10-2018 D934_07475 4b081339978d17a01062a1c3555884d0 283 Pfam PF00551 Formyl transferase 88 264 1.5E-38 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D934_12095 47b2011030c8f82d91ae39383d96c734 690 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 535 5.0E-160 T 15-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D934_12095 47b2011030c8f82d91ae39383d96c734 690 SUPERFAMILY SSF50249 583 689 7.59E-28 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_12095 47b2011030c8f82d91ae39383d96c734 690 SUPERFAMILY SSF52374 4 382 9.15E-88 T 15-10-2018 D934_12095 47b2011030c8f82d91ae39383d96c734 690 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 545 38.46 T 15-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D934_12095 47b2011030c8f82d91ae39383d96c734 690 Gene3D G3DSA:2.20.28.20 138 172 4.2E-142 T 15-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D934_12095 47b2011030c8f82d91ae39383d96c734 690 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_12095 47b2011030c8f82d91ae39383d96c734 690 SUPERFAMILY SSF57770 138 172 1.83E-12 T 15-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D934_12095 47b2011030c8f82d91ae39383d96c734 690 Pfam PF09334 tRNA synthetases class I (M) 5 394 1.9E-148 T 15-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_12095 47b2011030c8f82d91ae39383d96c734 690 SUPERFAMILY SSF47323 387 547 3.74E-39 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D934_12095 47b2011030c8f82d91ae39383d96c734 690 Gene3D G3DSA:3.40.50.620 5 377 4.2E-142 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_12095 47b2011030c8f82d91ae39383d96c734 690 Gene3D G3DSA:2.40.50.140 577 689 4.4E-29 T 15-10-2018 D934_12095 47b2011030c8f82d91ae39383d96c734 690 Gene3D G3DSA:1.10.730.10 378 536 2.3E-31 T 15-10-2018 D934_12095 47b2011030c8f82d91ae39383d96c734 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 2.7E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D934_12095 47b2011030c8f82d91ae39383d96c734 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 2.7E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D934_12095 47b2011030c8f82d91ae39383d96c734 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 86 97 2.7E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D934_12095 47b2011030c8f82d91ae39383d96c734 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 249 260 2.7E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D934_12095 47b2011030c8f82d91ae39383d96c734 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 38 52 2.7E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D934_12095 47b2011030c8f82d91ae39383d96c734 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 288 303 2.7E-25 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D934_12095 47b2011030c8f82d91ae39383d96c734 690 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 563 689 6.1E-38 T 15-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D934_12095 47b2011030c8f82d91ae39383d96c734 690 Pfam PF01588 Putative tRNA binding domain 593 687 2.5E-20 T 15-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 D934_12310 dfcc7a69462e5174b8dbea8aa2cc6ab0 186 Pfam PF11041 Protein of unknown function (DUF2612) 3 70 1.9E-13 T 15-10-2018 IPR021283 Protein of unknown function DUF2612 D934_12310 dfcc7a69462e5174b8dbea8aa2cc6ab0 186 Pfam PF11041 Protein of unknown function (DUF2612) 75 158 4.0E-24 T 15-10-2018 IPR021283 Protein of unknown function DUF2612 D934_06765 dfcc7a69462e5174b8dbea8aa2cc6ab0 186 Pfam PF11041 Protein of unknown function (DUF2612) 3 70 1.9E-13 T 15-10-2018 IPR021283 Protein of unknown function DUF2612 D934_06765 dfcc7a69462e5174b8dbea8aa2cc6ab0 186 Pfam PF11041 Protein of unknown function (DUF2612) 75 158 4.0E-24 T 15-10-2018 IPR021283 Protein of unknown function DUF2612 D934_08655 dfcc7a69462e5174b8dbea8aa2cc6ab0 186 Pfam PF11041 Protein of unknown function (DUF2612) 3 70 1.9E-13 T 15-10-2018 IPR021283 Protein of unknown function DUF2612 D934_08655 dfcc7a69462e5174b8dbea8aa2cc6ab0 186 Pfam PF11041 Protein of unknown function (DUF2612) 75 158 4.0E-24 T 15-10-2018 IPR021283 Protein of unknown function DUF2612 D934_03465 a44a8ab51a93f6ba43ebbc7d8bd8d056 350 Hamap MF_00790 Lipase chaperone [lifO]. 17 350 22.506 T 15-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 D934_03465 a44a8ab51a93f6ba43ebbc7d8bd8d056 350 Pfam PF03280 Proteobacterial lipase chaperone protein 149 340 1.2E-48 T 15-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 D934_03465 a44a8ab51a93f6ba43ebbc7d8bd8d056 350 SUPERFAMILY SSF158855 76 349 4.84E-76 T 15-10-2018 D934_04880 81046d0a10d20e3e693a516296cf8636 784 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 33 204 7.1E-41 T 15-10-2018 IPR025199 DNA translocase FtsK, 4TM region D934_04880 81046d0a10d20e3e693a516296cf8636 784 Pfam PF01580 FtsK/SpoIIIE family 394 607 1.9E-63 T 15-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 D934_04880 81046d0a10d20e3e693a516296cf8636 784 Gene3D G3DSA:1.10.10.10 722 784 1.2E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_04880 81046d0a10d20e3e693a516296cf8636 784 Gene3D G3DSA:3.30.980.40 286 390 1.6E-32 T 15-10-2018 D934_04880 81046d0a10d20e3e693a516296cf8636 784 Pfam PF09397 Ftsk gamma domain 720 780 2.9E-27 T 15-10-2018 IPR018541 FtsK gamma domain D934_04880 81046d0a10d20e3e693a516296cf8636 784 SMART SM00382 429 628 0.0015 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_04880 81046d0a10d20e3e693a516296cf8636 784 SUPERFAMILY SSF52540 366 679 9.11E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04880 81046d0a10d20e3e693a516296cf8636 784 Gene3D G3DSA:3.40.50.300 391 693 4.2E-115 T 15-10-2018 D934_04880 81046d0a10d20e3e693a516296cf8636 784 SUPERFAMILY SSF46785 718 782 3.33E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_04880 81046d0a10d20e3e693a516296cf8636 784 SMART SM00843 718 783 3.3E-40 T 15-10-2018 IPR018541 FtsK gamma domain D934_05860 73a59e7c9757de8cab2df80f114b3bcf 304 Pfam PF08029 HisG, C-terminal domain 233 301 4.4E-8 T 15-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 D934_05860 73a59e7c9757de8cab2df80f114b3bcf 304 Gene3D G3DSA:3.30.70.120 232 303 8.4E-8 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal D934_05860 73a59e7c9757de8cab2df80f114b3bcf 304 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 12 304 29.467 T 15-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 D934_05860 73a59e7c9757de8cab2df80f114b3bcf 304 Gene3D G3DSA:3.40.190.10 13 226 1.7E-62 T 15-10-2018 D934_05860 73a59e7c9757de8cab2df80f114b3bcf 304 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 13 201 5.0E-52 T 15-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 D934_05860 73a59e7c9757de8cab2df80f114b3bcf 304 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 209 302 4.7E-15 T 15-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 D934_05860 73a59e7c9757de8cab2df80f114b3bcf 304 SUPERFAMILY SSF53850 12 226 9.06E-59 T 15-10-2018 D934_05860 73a59e7c9757de8cab2df80f114b3bcf 304 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 162 183 - T 15-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 D934_05860 73a59e7c9757de8cab2df80f114b3bcf 304 Pfam PF01634 ATP phosphoribosyltransferase 60 224 3.7E-43 T 15-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 D934_05860 73a59e7c9757de8cab2df80f114b3bcf 304 Gene3D G3DSA:3.40.190.10 109 198 1.7E-62 T 15-10-2018 D934_11615 b28a20e68c80a0322d9ddb068b7b705c 896 SUPERFAMILY SSF52518 60 472 2.52E-133 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold D934_11615 b28a20e68c80a0322d9ddb068b7b705c 896 SUPERFAMILY SSF52922 707 894 4.14E-58 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D934_11615 b28a20e68c80a0322d9ddb068b7b705c 896 Gene3D G3DSA:3.40.50.970 477 711 3.4E-101 T 15-10-2018 D934_11615 b28a20e68c80a0322d9ddb068b7b705c 896 SUPERFAMILY SSF52518 480 706 9.18E-92 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold D934_11615 b28a20e68c80a0322d9ddb068b7b705c 896 PIRSF PIRSF000156 1 896 0.0 T 15-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 D934_11615 b28a20e68c80a0322d9ddb068b7b705c 896 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 138 294 1.1E-6 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D934_11615 b28a20e68c80a0322d9ddb068b7b705c 896 Gene3D G3DSA:3.40.50.970 59 476 1.6E-125 T 15-10-2018 D934_11615 b28a20e68c80a0322d9ddb068b7b705c 896 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 9 894 0.0 T 15-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 D934_11615 b28a20e68c80a0322d9ddb068b7b705c 896 Gene3D G3DSA:3.40.50.920 712 895 6.0E-74 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D934_05595 64eab8261c961386df2aa6dd1120789b 253 PRINTS PR00603 Cytochrome C1 signature 199 218 1.8E-5 T 15-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 D934_05595 64eab8261c961386df2aa6dd1120789b 253 PRINTS PR00603 Cytochrome C1 signature 52 71 1.8E-5 T 15-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 D934_05595 64eab8261c961386df2aa6dd1120789b 253 SUPERFAMILY SSF46626 30 217 1.09E-46 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D934_05595 64eab8261c961386df2aa6dd1120789b 253 Gene3D G3DSA:1.10.760.10 32 218 2.3E-24 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D934_05595 64eab8261c961386df2aa6dd1120789b 253 Pfam PF02167 Cytochrome C1 family 44 251 2.8E-25 T 15-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 D934_05580 b8ace724f827f2b7886bd298044e39b8 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 8.6E-60 T 15-10-2018 D934_05580 b8ace724f827f2b7886bd298044e39b8 258 Gene3D G3DSA:3.40.50.720 1 256 2.2E-79 T 15-10-2018 D934_05580 b8ace724f827f2b7886bd298044e39b8 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D934_05580 b8ace724f827f2b7886bd298044e39b8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.9E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_05580 b8ace724f827f2b7886bd298044e39b8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.9E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_05580 b8ace724f827f2b7886bd298044e39b8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.9E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_05580 b8ace724f827f2b7886bd298044e39b8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.9E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_05580 b8ace724f827f2b7886bd298044e39b8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.9E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_05580 b8ace724f827f2b7886bd298044e39b8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.9E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_05580 b8ace724f827f2b7886bd298044e39b8 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.7E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_05580 b8ace724f827f2b7886bd298044e39b8 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.7E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_05580 b8ace724f827f2b7886bd298044e39b8 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 1.7E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_05580 b8ace724f827f2b7886bd298044e39b8 258 SUPERFAMILY SSF51735 9 255 1.66E-78 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_03795 f28866afe408bd05eca4c74215eaf5fa 337 Gene3D G3DSA:3.40.50.1820 11 337 4.3E-98 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_03795 f28866afe408bd05eca4c74215eaf5fa 337 Pfam PF07859 alpha/beta hydrolase fold 103 309 1.3E-71 T 15-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 D934_03795 f28866afe408bd05eca4c74215eaf5fa 337 SUPERFAMILY SSF53474 46 333 1.62E-69 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_03795 f28866afe408bd05eca4c74215eaf5fa 337 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 102 118 - T 15-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 D934_10470 339a797b429ff86a547c1c5056634500 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_10470 339a797b429ff86a547c1c5056634500 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 8.0E-4 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_10470 339a797b429ff86a547c1c5056634500 144 Gene3D G3DSA:3.30.700.10 44 143 3.4E-23 T 15-10-2018 D934_10470 339a797b429ff86a547c1c5056634500 144 SUPERFAMILY SSF54523 46 142 1.31E-25 T 15-10-2018 D934_10470 339a797b429ff86a547c1c5056634500 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 18 43 8.5E-10 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 D934_10470 339a797b429ff86a547c1c5056634500 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 54 72 8.5E-10 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 D934_10470 339a797b429ff86a547c1c5056634500 144 Pfam PF08334 Type II secretion system (T2SS), protein G 41 142 2.0E-29 T 15-10-2018 IPR013545 Type II secretion system protein G D934_10470 339a797b429ff86a547c1c5056634500 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 18 142 1.1E-28 T 15-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 D934_11400 ef85f832a1e981f97dd88db5ed8145cc 1053 Gene3D G3DSA:1.50.10.10 621 933 7.0E-19 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 D934_11400 ef85f832a1e981f97dd88db5ed8145cc 1053 SUPERFAMILY SSF48208 565 988 4.16E-40 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 D934_11400 ef85f832a1e981f97dd88db5ed8145cc 1053 SUPERFAMILY SSF49785 26 177 4.57E-20 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily D934_11400 ef85f832a1e981f97dd88db5ed8145cc 1053 Pfam PF06202 Amylo-alpha-1,6-glucosidase 604 711 4.4E-5 T 15-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 D934_11400 ef85f832a1e981f97dd88db5ed8145cc 1053 SUPERFAMILY SSF49785 163 306 7.8E-18 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily D934_11400 ef85f832a1e981f97dd88db5ed8145cc 1053 Gene3D G3DSA:2.60.120.260 183 308 2.2E-16 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily D934_11400 ef85f832a1e981f97dd88db5ed8145cc 1053 Gene3D G3DSA:2.60.120.430 19 179 2.0E-12 T 15-10-2018 D934_11400 ef85f832a1e981f97dd88db5ed8145cc 1053 Pfam PF00754 F5/8 type C domain 203 301 1.2E-14 T 15-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain D934_05950 1b1bdbf2a3e913cdff59a63a49824055 961 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 169 5.3E-21 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain D934_05950 1b1bdbf2a3e913cdff59a63a49824055 961 Gene3D G3DSA:2.170.130.10 39 173 1.7E-30 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D934_05950 1b1bdbf2a3e913cdff59a63a49824055 961 SUPERFAMILY SSF56935 43 961 5.8E-79 T 15-10-2018 D934_05950 1b1bdbf2a3e913cdff59a63a49824055 961 Pfam PF00593 TonB dependent receptor 400 959 1.3E-35 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D934_01870 db3d47d8c200fb3cd1e9765d1cffb7ed 243 Pfam PF12710 haloacid dehalogenase-like hydrolase 15 201 1.0E-22 T 15-10-2018 D934_01870 db3d47d8c200fb3cd1e9765d1cffb7ed 243 Gene3D G3DSA:3.40.50.1000 15 218 1.4E-22 T 15-10-2018 IPR023214 HAD superfamily D934_01870 db3d47d8c200fb3cd1e9765d1cffb7ed 243 SUPERFAMILY SSF56784 14 219 8.69E-18 T 15-10-2018 IPR036412 HAD-like superfamily D934_01870 db3d47d8c200fb3cd1e9765d1cffb7ed 243 Gene3D G3DSA:1.20.1440.100 26 103 1.4E-22 T 15-10-2018 D934_01635 bfbc96e92f75602e584f199f27043356 509 SUPERFAMILY SSF103473 18 276 8.37E-11 T 15-10-2018 IPR036259 MFS transporter superfamily D934_01635 bfbc96e92f75602e584f199f27043356 509 Gene3D G3DSA:1.20.1250.20 290 501 1.3E-7 T 15-10-2018 D934_01635 bfbc96e92f75602e584f199f27043356 509 SUPERFAMILY SSF103473 223 500 6.67E-15 T 15-10-2018 IPR036259 MFS transporter superfamily D934_01635 bfbc96e92f75602e584f199f27043356 509 Pfam PF13000 Acetyl-coenzyme A transporter 1 22 107 6.4E-11 T 15-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 D934_01635 bfbc96e92f75602e584f199f27043356 509 Gene3D G3DSA:1.20.1250.20 17 206 9.1E-8 T 15-10-2018 D934_04835 26b2ac9a6f928149aed9a1e9ea21bee8 379 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 356 5.5E-126 T 15-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 D934_04835 26b2ac9a6f928149aed9a1e9ea21bee8 379 Pfam PF03054 tRNA methyl transferase 5 356 1.5E-127 T 15-10-2018 D934_04835 26b2ac9a6f928149aed9a1e9ea21bee8 379 Gene3D G3DSA:3.40.50.620 1 208 6.2E-87 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_04835 26b2ac9a6f928149aed9a1e9ea21bee8 379 Gene3D G3DSA:2.40.30.10 279 362 2.2E-25 T 15-10-2018 D934_04835 26b2ac9a6f928149aed9a1e9ea21bee8 379 Gene3D G3DSA:2.30.30.280 209 276 7.3E-22 T 15-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 D934_04835 26b2ac9a6f928149aed9a1e9ea21bee8 379 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 357 36.366 T 15-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 D934_04835 26b2ac9a6f928149aed9a1e9ea21bee8 379 SUPERFAMILY SSF52402 3 240 6.62E-50 T 15-10-2018 D934_04700 63bfdfbe07286de34bd5f5ae6405518a 446 Pfam PF04963 Sigma-54 factor, core binding domain 80 273 6.7E-46 T 15-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 D934_04700 63bfdfbe07286de34bd5f5ae6405518a 446 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 1 442 6.4E-135 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D934_04700 63bfdfbe07286de34bd5f5ae6405518a 446 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 1 34 1.2E-11 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D934_04700 63bfdfbe07286de34bd5f5ae6405518a 446 PRINTS PR00045 Sigma-54 factor signature 361 372 1.7E-25 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D934_04700 63bfdfbe07286de34bd5f5ae6405518a 446 PRINTS PR00045 Sigma-54 factor signature 154 171 1.7E-25 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D934_04700 63bfdfbe07286de34bd5f5ae6405518a 446 PRINTS PR00045 Sigma-54 factor signature 345 357 1.7E-25 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D934_04700 63bfdfbe07286de34bd5f5ae6405518a 446 PRINTS PR00045 Sigma-54 factor signature 419 437 1.7E-25 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D934_04700 63bfdfbe07286de34bd5f5ae6405518a 446 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 333 352 - T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D934_04700 63bfdfbe07286de34bd5f5ae6405518a 446 PIRSF PIRSF000774 1 446 1.1E-127 T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D934_04700 63bfdfbe07286de34bd5f5ae6405518a 446 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 424 431 - T 15-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D934_04700 63bfdfbe07286de34bd5f5ae6405518a 446 Pfam PF04552 Sigma-54, DNA binding domain 286 444 6.6E-64 T 15-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding D934_04700 63bfdfbe07286de34bd5f5ae6405518a 446 Gene3D G3DSA:1.10.10.60 385 443 1.1E-21 T 15-10-2018 D934_04700 63bfdfbe07286de34bd5f5ae6405518a 446 Gene3D G3DSA:1.10.10.1330 85 193 3.8E-17 T 15-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 Gene3D G3DSA:3.30.1330.10 218 423 1.1E-38 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 SMART SM01211 1082 1333 2.4E-140 T 15-10-2018 D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 SUPERFAMILY SSF82697 13 160 1.94E-31 T 15-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 SUPERFAMILY SSF109736 173 224 2.48E-17 T 15-10-2018 D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 SUPERFAMILY SSF56042 859 1075 3.59E-46 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 SUPERFAMILY SSF55326 655 852 2.12E-61 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 13 1334 19.879 T 15-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 Gene3D G3DSA:1.10.8.750 163 217 8.3E-20 T 15-10-2018 D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1082 1333 1.7E-97 T 15-10-2018 D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 SUPERFAMILY SSF56042 433 691 2.39E-48 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 Gene3D G3DSA:3.30.1330.10 660 843 1.7E-21 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 SUPERFAMILY SSF55326 225 428 3.07E-48 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 Gene3D G3DSA:3.40.50.880 1025 1334 6.6E-122 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 15 1333 0.0 T 15-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 Gene3D G3DSA:3.90.650.10 844 1024 3.5E-27 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 Gene3D G3DSA:3.90.650.10 424 604 5.4E-51 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 Pfam PF02769 AIR synthase related protein, C-terminal domain 900 994 6.4E-8 T 15-10-2018 IPR010918 PurM-like, C-terminal domain D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 Pfam PF02769 AIR synthase related protein, C-terminal domain 433 590 4.7E-32 T 15-10-2018 IPR010918 PurM-like, C-terminal domain D934_04765 a7b4ee3c6dbb6b29a8e6818635d481c3 1334 SUPERFAMILY SSF52317 1079 1333 1.33E-90 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_03040 ce39c32b04b775658d8852cf44a4a300 129 SUPERFAMILY SSF47413 11 74 1.93E-5 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_03040 ce39c32b04b775658d8852cf44a4a300 129 Pfam PF13560 Helix-turn-helix domain 13 78 1.5E-6 T 15-10-2018 D934_03040 ce39c32b04b775658d8852cf44a4a300 129 Gene3D G3DSA:1.10.260.40 13 119 2.2E-7 T 15-10-2018 D934_06100 cb4fb008cf8910b061c9ec0683cf57bc 242 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 19 195 33.55 T 15-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 D934_06100 cb4fb008cf8910b061c9ec0683cf57bc 242 Pfam PF02677 Uncharacterized BCR, COG1636 19 193 6.3E-64 T 15-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 D934_06185 64fa1e344df31f4cdfa788b7074065d3 433 SMART SM01040 60 148 5.9E-27 T 15-10-2018 IPR003497 BRO N-terminal domain D934_06185 64fa1e344df31f4cdfa788b7074065d3 433 SMART SM01040 194 281 2.1E-36 T 15-10-2018 IPR003497 BRO N-terminal domain D934_06185 64fa1e344df31f4cdfa788b7074065d3 433 Pfam PF02498 BRO family, N-terminal domain 195 281 1.1E-24 T 15-10-2018 IPR003497 BRO N-terminal domain D934_06185 64fa1e344df31f4cdfa788b7074065d3 433 Pfam PF02498 BRO family, N-terminal domain 61 148 1.3E-19 T 15-10-2018 IPR003497 BRO N-terminal domain D934_05125 2e8bba33449ab3f6db007849d895b467 97 SUPERFAMILY SSF47413 9 93 5.91E-26 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_05125 2e8bba33449ab3f6db007849d895b467 97 Gene3D G3DSA:1.10.260.40 1 95 5.6E-33 T 15-10-2018 D934_05125 2e8bba33449ab3f6db007849d895b467 97 Pfam PF01381 Helix-turn-helix 19 67 3.2E-10 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_05125 2e8bba33449ab3f6db007849d895b467 97 SMART SM00530 13 69 2.6E-6 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_05125 2e8bba33449ab3f6db007849d895b467 97 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 5 83 7.0E-32 T 15-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 D934_07270 f5d6d3151f09f7906a41c70570ceb23e 242 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 7 234 9.5E-20 T 15-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 D934_07270 f5d6d3151f09f7906a41c70570ceb23e 242 Pfam PF03309 Type III pantothenate kinase 5 190 2.0E-32 T 15-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 D934_07270 f5d6d3151f09f7906a41c70570ceb23e 242 Gene3D G3DSA:3.30.420.490 114 228 6.3E-53 T 15-10-2018 D934_07270 f5d6d3151f09f7906a41c70570ceb23e 242 SUPERFAMILY SSF53067 5 109 7.77E-16 T 15-10-2018 D934_07270 f5d6d3151f09f7906a41c70570ceb23e 242 Gene3D G3DSA:3.30.420.40 5 233 6.3E-53 T 15-10-2018 D934_07270 f5d6d3151f09f7906a41c70570ceb23e 242 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 240 14.342 T 15-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 D934_07270 f5d6d3151f09f7906a41c70570ceb23e 242 SUPERFAMILY SSF53067 112 236 5.61E-25 T 15-10-2018 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 ProSitePatterns PS01135 FtsZ protein signature 2. 99 120 - T 15-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 SUPERFAMILY SSF52490 15 210 1.57E-68 T 15-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 174 3.1E-39 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 Gene3D G3DSA:3.40.50.1440 5 222 6.5E-80 T 15-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 336 1.9E-129 T 15-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 357 37.399 T 15-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 SMART SM00864 15 207 1.2E-110 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 PRINTS PR00423 Cell division protein FtsZ signature 191 213 4.1E-52 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 PRINTS PR00423 Cell division protein FtsZ signature 214 235 4.1E-52 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 PRINTS PR00423 Cell division protein FtsZ signature 100 120 4.1E-52 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 PRINTS PR00423 Cell division protein FtsZ signature 128 149 4.1E-52 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 Gene3D G3DSA:3.30.1330.20 223 337 7.8E-35 T 15-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 SMART SM00865 209 327 2.7E-53 T 15-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 SUPERFAMILY SSF55307 206 320 2.98E-42 T 15-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 D934_13150 580a9aba413b2cfb615dcb84bad7a044 411 Pfam PF12327 FtsZ family, C-terminal domain 224 318 1.4E-37 T 15-10-2018 IPR024757 Cell division protein FtsZ, C-terminal D934_00490 6ef7eb2d7c8c36e210276240bdea2802 436 SUPERFAMILY SSF51261 213 433 7.59E-45 T 15-10-2018 IPR011055 Duplicated hybrid motif D934_00490 6ef7eb2d7c8c36e210276240bdea2802 436 Pfam PF01551 Peptidase family M23 336 429 4.1E-26 T 15-10-2018 IPR016047 Peptidase M23 D934_00490 6ef7eb2d7c8c36e210276240bdea2802 436 Gene3D G3DSA:2.70.70.10 301 434 6.0E-33 T 15-10-2018 IPR011055 Duplicated hybrid motif D934_09265 39f72024965b0708de37da6dd970ef1c 384 Pfam PF05707 Zonular occludens toxin (Zot) 10 187 2.8E-12 T 15-10-2018 IPR008900 Zona occludens toxin D934_09265 39f72024965b0708de37da6dd970ef1c 384 Gene3D G3DSA:3.40.50.300 1 188 3.3E-36 T 15-10-2018 D934_05035 6ad52642503aeee2c23ab2e8b8bfb636 294 Gene3D G3DSA:1.10.443.10 110 283 9.1E-57 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D934_05035 6ad52642503aeee2c23ab2e8b8bfb636 294 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 291 8.5E-104 T 15-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 D934_05035 6ad52642503aeee2c23ab2e8b8bfb636 294 SUPERFAMILY SSF56349 4 281 3.24E-58 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D934_05035 6ad52642503aeee2c23ab2e8b8bfb636 294 Gene3D G3DSA:1.10.150.130 2 96 1.5E-20 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal D934_05035 6ad52642503aeee2c23ab2e8b8bfb636 294 Pfam PF00589 Phage integrase family 110 275 6.5E-47 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D934_05035 6ad52642503aeee2c23ab2e8b8bfb636 294 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 88 8.8E-19 T 15-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D934_05035 6ad52642503aeee2c23ab2e8b8bfb636 294 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 289 58.73 T 15-10-2018 IPR023009 Tyrosine recombinase XerC/XerD D934_09435 dc2c8b80b15c0cc0a9f42f8fcdd9389d 271 Pfam PF16331 TolA binding protein trimerisation 27 98 7.3E-20 T 15-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 D934_09435 dc2c8b80b15c0cc0a9f42f8fcdd9389d 271 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 261 2.2E-38 T 15-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal D934_09435 dc2c8b80b15c0cc0a9f42f8fcdd9389d 271 Pfam PF13525 Outer membrane lipoprotein 144 265 3.7E-11 T 15-10-2018 IPR039565 Outer membrane lipoprotein BamD-like D934_09435 dc2c8b80b15c0cc0a9f42f8fcdd9389d 271 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 2 264 18.875 T 15-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 D934_09435 dc2c8b80b15c0cc0a9f42f8fcdd9389d 271 Gene3D G3DSA:1.25.40.10 145 271 7.8E-33 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_09435 dc2c8b80b15c0cc0a9f42f8fcdd9389d 271 SUPERFAMILY SSF48452 145 260 1.72E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_03965 9d245d51a748e607e490e7bf6b143e19 350 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 79 338 2.8E-44 T 15-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region D934_03965 9d245d51a748e607e490e7bf6b143e19 350 SUPERFAMILY SSF63829 49 349 2.13E-57 T 15-10-2018 D934_03965 9d245d51a748e607e490e7bf6b143e19 350 Gene3D G3DSA:2.120.10.30 36 346 2.1E-93 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D934_05305 43797c3df6c0f0e63d0297cc2611b66c 426 Pfam PF10926 Protein of unknown function (DUF2800) 4 391 1.3E-114 T 15-10-2018 IPR021229 Protein of unknown function DUF2800 D934_07585 d393316f360aefc09cfc634f809fe053 107 SMART SM01321 1 103 1.6E-28 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D934_07585 d393316f360aefc09cfc634f809fe053 107 Gene3D G3DSA:3.30.70.1290 1 107 9.1E-33 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D934_07585 d393316f360aefc09cfc634f809fe053 107 Pfam PF01797 Transposase IS200 like 1 103 1.4E-33 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D934_07585 d393316f360aefc09cfc634f809fe053 107 SUPERFAMILY SSF143422 1 104 6.41E-36 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D934_05990 10d8d23d14ede2507eb6508da793f4bb 298 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 61 76 8.2E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_05990 10d8d23d14ede2507eb6508da793f4bb 298 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 8.2E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_05990 10d8d23d14ede2507eb6508da793f4bb 298 Gene3D G3DSA:3.30.300.20 187 298 1.8E-40 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta D934_05990 10d8d23d14ede2507eb6508da793f4bb 298 SUPERFAMILY SSF54814 183 298 1.18E-39 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 D934_05990 10d8d23d14ede2507eb6508da793f4bb 298 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 167 9.5E-30 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D934_05990 10d8d23d14ede2507eb6508da793f4bb 298 SUPERFAMILY SSF52540 11 206 4.58E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_05990 10d8d23d14ede2507eb6508da793f4bb 298 Pfam PF01926 50S ribosome-binding GTPase 11 126 1.9E-23 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_05990 10d8d23d14ede2507eb6508da793f4bb 298 Pfam PF07650 KH domain 210 285 1.7E-19 T 15-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_05990 10d8d23d14ede2507eb6508da793f4bb 298 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 280 1.7E-84 T 15-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_05990 10d8d23d14ede2507eb6508da793f4bb 298 Hamap MF_00367 GTPase Era [era]. 7 297 34.971 T 15-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_05990 10d8d23d14ede2507eb6508da793f4bb 298 Gene3D G3DSA:3.40.50.300 6 185 1.1E-47 T 15-10-2018 D934_01430 900de6945c365fc9b3583b80cd239584 211 Pfam PF01726 LexA DNA binding domain 2 64 5.1E-17 T 15-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 D934_01430 900de6945c365fc9b3583b80cd239584 211 SUPERFAMILY SSF46785 1 69 2.69E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_01430 900de6945c365fc9b3583b80cd239584 211 SUPERFAMILY SSF51306 86 208 2.44E-33 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily D934_01430 900de6945c365fc9b3583b80cd239584 211 Hamap MF_00015 LexA repressor [lexA]. 2 210 30.31 T 15-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 D934_01430 900de6945c365fc9b3583b80cd239584 211 Gene3D G3DSA:1.10.10.10 1 68 2.5E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_01430 900de6945c365fc9b3583b80cd239584 211 Gene3D G3DSA:2.10.109.10 92 210 1.2E-35 T 15-10-2018 D934_01430 900de6945c365fc9b3583b80cd239584 211 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 162 174 3.7E-10 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 D934_01430 900de6945c365fc9b3583b80cd239584 211 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 123 133 3.7E-10 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 D934_01430 900de6945c365fc9b3583b80cd239584 211 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 134 145 3.7E-10 T 15-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 D934_01430 900de6945c365fc9b3583b80cd239584 211 TIGRFAM TIGR00498 lexA: repressor LexA 2 209 1.2E-54 T 15-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 D934_01430 900de6945c365fc9b3583b80cd239584 211 Pfam PF00717 Peptidase S24-like 126 191 1.4E-14 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D934_10965 8fd885c19efc870d74a477ac7f7b410d 146 Pfam PF01475 Ferric uptake regulator family 19 139 1.5E-41 T 15-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 D934_10965 8fd885c19efc870d74a477ac7f7b410d 146 SUPERFAMILY SSF46785 14 141 2.91E-37 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_10965 8fd885c19efc870d74a477ac7f7b410d 146 Gene3D G3DSA:1.10.10.10 9 92 4.5E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_10965 8fd885c19efc870d74a477ac7f7b410d 146 Gene3D G3DSA:3.30.1490.190 95 146 1.1E-15 T 15-10-2018 D934_00810 9416e410d9aa7b4580fd5df38693960b 943 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 725 890 3.8E-33 T 15-10-2018 IPR008487 Protein of unknown function DUF769 D934_00810 9416e410d9aa7b4580fd5df38693960b 943 Pfam PF13332 Haemagluttinin repeat 48 219 1.9E-42 T 15-10-2018 IPR025157 Hemagglutinin repeat D934_11530 11f8686604d6d7b85387355faba06d02 246 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 16 239 36.957 T 15-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 D934_11530 11f8686604d6d7b85387355faba06d02 246 Gene3D G3DSA:3.40.50.150 16 238 2.3E-77 T 15-10-2018 D934_11530 11f8686604d6d7b85387355faba06d02 246 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 233 1.6E-85 T 15-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 D934_11530 11f8686604d6d7b85387355faba06d02 246 SUPERFAMILY SSF53335 18 233 1.55E-51 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_11530 11f8686604d6d7b85387355faba06d02 246 Pfam PF13489 Methyltransferase domain 54 207 1.1E-24 T 15-10-2018 D934_04410 e60e438e682e7befc645509bb2e40588 726 Pfam PF00476 DNA polymerase family A 266 499 2.6E-10 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_04410 e60e438e682e7befc645509bb2e40588 726 SUPERFAMILY SSF53098 30 178 1.39E-9 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_04410 e60e438e682e7befc645509bb2e40588 726 SUPERFAMILY SSF56672 187 724 3.34E-66 T 15-10-2018 D934_04410 e60e438e682e7befc645509bb2e40588 726 SMART SM00482 372 690 3.2E-6 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D934_04410 e60e438e682e7befc645509bb2e40588 726 Gene3D G3DSA:3.30.420.10 8 194 1.4E-5 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D934_09485 b444de0a3bd7fab5cbf7ba52d3cef70a 204 Gene3D G3DSA:3.30.420.10 35 191 4.2E-42 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D934_09485 b444de0a3bd7fab5cbf7ba52d3cef70a 204 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 159 3.0E-37 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D934_09485 b444de0a3bd7fab5cbf7ba52d3cef70a 204 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 36 49 3.0E-37 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D934_09485 b444de0a3bd7fab5cbf7ba52d3cef70a 204 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 94 110 3.0E-37 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D934_09485 b444de0a3bd7fab5cbf7ba52d3cef70a 204 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 116 132 3.0E-37 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D934_09485 b444de0a3bd7fab5cbf7ba52d3cef70a 204 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 171 183 3.0E-37 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D934_09485 b444de0a3bd7fab5cbf7ba52d3cef70a 204 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 33 186 42.632 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D934_09485 b444de0a3bd7fab5cbf7ba52d3cef70a 204 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 146 180 - T 15-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 D934_09485 b444de0a3bd7fab5cbf7ba52d3cef70a 204 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 35 183 3.4E-47 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D934_09485 b444de0a3bd7fab5cbf7ba52d3cef70a 204 SUPERFAMILY SSF53098 34 187 5.46E-47 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_09485 b444de0a3bd7fab5cbf7ba52d3cef70a 204 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 35 188 7.7E-51 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D934_13415 1dd377eac5a89203b173f5439980757e 85 PRINTS PR00064 Ribosomal protein L35 signature 56 74 1.8E-18 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D934_13415 1dd377eac5a89203b173f5439980757e 85 PRINTS PR00064 Ribosomal protein L35 signature 23 40 1.8E-18 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D934_13415 1dd377eac5a89203b173f5439980757e 85 PRINTS PR00064 Ribosomal protein L35 signature 41 55 1.8E-18 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D934_13415 1dd377eac5a89203b173f5439980757e 85 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 21 84 18.905 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D934_13415 1dd377eac5a89203b173f5439980757e 85 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 22 84 1.1E-25 T 15-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D934_13415 1dd377eac5a89203b173f5439980757e 85 SUPERFAMILY SSF143034 22 84 2.88E-22 T 15-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13415 1dd377eac5a89203b173f5439980757e 85 Gene3D G3DSA:2.40.50.530 21 84 2.6E-21 T 15-10-2018 D934_13415 1dd377eac5a89203b173f5439980757e 85 Pfam PF01632 Ribosomal protein L35 22 82 6.0E-24 T 15-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13415 1dd377eac5a89203b173f5439980757e 85 ProSitePatterns PS00936 Ribosomal protein L35 signature. 25 51 - T 15-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03545 fdabaf0f8636c9274ec8fa1fb5f7cb76 349 PIRSF PIRSF000355 4 349 1.2E-112 T 15-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D934_03545 fdabaf0f8636c9274ec8fa1fb5f7cb76 349 Pfam PF00268 Ribonucleotide reductase, small chain 34 307 2.9E-68 T 15-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D934_03545 fdabaf0f8636c9274ec8fa1fb5f7cb76 349 Gene3D G3DSA:1.10.620.20 29 320 2.7E-78 T 15-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 D934_03545 fdabaf0f8636c9274ec8fa1fb5f7cb76 349 SUPERFAMILY SSF47240 25 349 3.64E-85 T 15-10-2018 IPR009078 Ferritin-like superfamily D934_08305 0208ba2760e05fde74c0031f3582e043 464 Gene3D G3DSA:3.30.1850.10 13 134 2.5E-34 T 15-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 D934_08305 0208ba2760e05fde74c0031f3582e043 464 Gene3D G3DSA:3.40.50.450 136 462 2.7E-112 T 15-10-2018 D934_08305 0208ba2760e05fde74c0031f3582e043 464 Pfam PF14793 Domain of unknown function (DUF4478) 18 122 9.2E-35 T 15-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 D934_08305 0208ba2760e05fde74c0031f3582e043 464 Pfam PF03641 Possible lysine decarboxylase 201 340 4.5E-31 T 15-10-2018 IPR031100 LOG family D934_08305 0208ba2760e05fde74c0031f3582e043 464 Pfam PF11892 Domain of unknown function (DUF3412) 344 462 2.7E-53 T 15-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 D934_08305 0208ba2760e05fde74c0031f3582e043 464 SUPERFAMILY SSF102405 139 340 2.14E-38 T 15-10-2018 D934_05755 dce0505cb37f0ef5fbe7c887166610a3 133 SUPERFAMILY SSF160472 1 121 1.7E-40 T 15-10-2018 IPR023138 NMB0513-like superfamily D934_05755 dce0505cb37f0ef5fbe7c887166610a3 133 Pfam PF04591 Protein of unknown function, DUF596 56 132 2.5E-29 T 15-10-2018 IPR007670 Protein of unknown function DUF596 D934_05755 dce0505cb37f0ef5fbe7c887166610a3 133 Gene3D G3DSA:1.10.3510.10 2 123 3.3E-23 T 15-10-2018 IPR023138 NMB0513-like superfamily D934_00780 b363dbe34e540f75120493a51a906edd 88 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 87 9.0E-16 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family D934_00780 b363dbe34e540f75120493a51a906edd 88 SUPERFAMILY SSF143011 2 86 3.14E-22 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D934_00780 b363dbe34e540f75120493a51a906edd 88 Gene3D G3DSA:3.30.2310.20 1 88 2.6E-31 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D934_00780 b363dbe34e540f75120493a51a906edd 88 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 87 4.1E-10 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family D934_02300 3c07b63328672e3dcbf70891511a0898 135 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 18 135 18.722 T 15-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 D934_02300 3c07b63328672e3dcbf70891511a0898 135 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 38 134 1.6E-35 T 15-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02300 3c07b63328672e3dcbf70891511a0898 135 Gene3D G3DSA:1.20.58.1610 11 135 1.6E-41 T 15-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_09680 93751d324aa86796b540f334cc6cfe19 723 Gene3D G3DSA:1.10.1370.10 184 654 2.7E-246 T 15-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 D934_09680 93751d324aa86796b540f334cc6cfe19 723 Pfam PF01432 Peptidase family M3 270 721 3.7E-133 T 15-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 D934_09680 93751d324aa86796b540f334cc6cfe19 723 SUPERFAMILY SSF55486 43 721 1.33E-180 T 15-10-2018 D934_09680 93751d324aa86796b540f334cc6cfe19 723 Gene3D G3DSA:1.10.1370.40 73 716 2.7E-246 T 15-10-2018 D934_10430 0f70357f8a12d8607899faf30a8cbc3f 775 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 692 725 - T 15-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 D934_10430 0f70357f8a12d8607899faf30a8cbc3f 775 Pfam PF03958 Bacterial type II/III secretion system short domain 344 483 3.8E-15 T 15-10-2018 IPR005644 NolW-like D934_10430 0f70357f8a12d8607899faf30a8cbc3f 775 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 108 756 3.6E-171 T 15-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 D934_10430 0f70357f8a12d8607899faf30a8cbc3f 775 Gene3D G3DSA:3.30.1370.120 106 260 2.1E-25 T 15-10-2018 IPR038591 NolW-like superfamily D934_10430 0f70357f8a12d8607899faf30a8cbc3f 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 567 591 1.3E-14 T 15-10-2018 IPR001775 GspD/PilQ family D934_10430 0f70357f8a12d8607899faf30a8cbc3f 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 711 729 1.3E-14 T 15-10-2018 IPR001775 GspD/PilQ family D934_10430 0f70357f8a12d8607899faf30a8cbc3f 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 484 494 1.3E-14 T 15-10-2018 IPR001775 GspD/PilQ family D934_10430 0f70357f8a12d8607899faf30a8cbc3f 775 PRINTS PR00811 Bacterial general secretion pathway protein D signature 734 748 1.3E-14 T 15-10-2018 IPR001775 GspD/PilQ family D934_10430 0f70357f8a12d8607899faf30a8cbc3f 775 Pfam PF00263 Bacterial type II and III secretion system protein 571 747 4.3E-43 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 D934_02255 4c5cbfa2572db1abb1f6263488e52b86 113 Pfam PF02384 N-6 DNA Methylase 2 70 5.5E-10 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 D934_02255 4c5cbfa2572db1abb1f6263488e52b86 113 Gene3D G3DSA:3.40.50.150 1 91 3.3E-9 T 15-10-2018 D934_02255 4c5cbfa2572db1abb1f6263488e52b86 113 SUPERFAMILY SSF53335 2 76 1.45E-10 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_11105 174fa21a674e84f5291f1bf21279db3d 275 Gene3D G3DSA:3.30.1130.10 133 275 3.3E-48 T 15-10-2018 D934_11105 174fa21a674e84f5291f1bf21279db3d 275 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 275 127.709 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D934_11105 174fa21a674e84f5291f1bf21279db3d 275 PIRSF PIRSF004750 1 275 7.1E-103 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D934_11105 174fa21a674e84f5291f1bf21279db3d 275 Pfam PF14489 QueF-like protein 187 263 1.5E-27 T 15-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D934_11105 174fa21a674e84f5291f1bf21279db3d 275 SUPERFAMILY SSF55620 174 263 1.26E-10 T 15-10-2018 D934_11105 174fa21a674e84f5291f1bf21279db3d 275 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 15 123 2.8E-42 T 15-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D934_11105 174fa21a674e84f5291f1bf21279db3d 275 Gene3D G3DSA:3.30.1130.10 15 127 4.8E-39 T 15-10-2018 D934_11105 174fa21a674e84f5291f1bf21279db3d 275 TIGRFAM TIGR03138 QueF: queuine synthase 4 275 1.7E-103 T 15-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D934_09410 3c41ac59bddaa02e079e0cd9d1e423f5 168 PIRSF PIRSF000303 1 162 4.4E-63 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D934_09410 3c41ac59bddaa02e079e0cd9d1e423f5 168 Gene3D G3DSA:3.40.30.10 1 162 5.5E-63 T 15-10-2018 D934_09410 3c41ac59bddaa02e079e0cd9d1e423f5 168 PRINTS PR01011 Glutathione peroxidase family signature 57 73 9.0E-19 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D934_09410 3c41ac59bddaa02e079e0cd9d1e423f5 168 PRINTS PR01011 Glutathione peroxidase family signature 22 39 9.0E-19 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D934_09410 3c41ac59bddaa02e079e0cd9d1e423f5 168 PRINTS PR01011 Glutathione peroxidase family signature 123 132 9.0E-19 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D934_09410 3c41ac59bddaa02e079e0cd9d1e423f5 168 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 15-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 D934_09410 3c41ac59bddaa02e079e0cd9d1e423f5 168 Pfam PF00255 Glutathione peroxidase 4 111 1.3E-38 T 15-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D934_09410 3c41ac59bddaa02e079e0cd9d1e423f5 168 SUPERFAMILY SSF52833 3 159 2.82E-59 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_06075 f13eea7286b73f6fd3136dc17bdd5f11 516 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 278 467 6.6E-61 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 D934_06075 f13eea7286b73f6fd3136dc17bdd5f11 516 SUPERFAMILY SSF53067 272 511 2.1E-79 T 15-10-2018 D934_06075 f13eea7286b73f6fd3136dc17bdd5f11 516 Hamap MF_00186 Glycerol kinase [glpK]. 20 514 58.391 T 15-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 D934_06075 f13eea7286b73f6fd3136dc17bdd5f11 516 PIRSF PIRSF000538 20 513 1.8E-176 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 D934_06075 f13eea7286b73f6fd3136dc17bdd5f11 516 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 21 511 7.7E-220 T 15-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 D934_06075 f13eea7286b73f6fd3136dc17bdd5f11 516 Gene3D G3DSA:3.30.420.40 271 515 8.4E-85 T 15-10-2018 D934_06075 f13eea7286b73f6fd3136dc17bdd5f11 516 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 152 164 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 D934_06075 f13eea7286b73f6fd3136dc17bdd5f11 516 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 22 269 3.7E-82 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 D934_06075 f13eea7286b73f6fd3136dc17bdd5f11 516 SUPERFAMILY SSF53067 21 272 1.14E-93 T 15-10-2018 D934_06075 f13eea7286b73f6fd3136dc17bdd5f11 516 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 379 399 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 D934_06075 f13eea7286b73f6fd3136dc17bdd5f11 516 Gene3D G3DSA:3.30.420.40 17 270 7.4E-107 T 15-10-2018 D934_04290 a3267f6d07d3c0b25aba8265f48c6ba7 142 Pfam PF02630 SCO1/SenC 1 116 7.7E-16 T 15-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04290 a3267f6d07d3c0b25aba8265f48c6ba7 142 SUPERFAMILY SSF52833 1 139 2.67E-27 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_04290 a3267f6d07d3c0b25aba8265f48c6ba7 142 Gene3D G3DSA:3.40.30.10 1 136 2.6E-30 T 15-10-2018 D934_05465 f7193db53af4cdeda8d40cdf6b6d3f6e 562 Gene3D G3DSA:3.50.50.60 43 297 7.4E-8 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_05465 f7193db53af4cdeda8d40cdf6b6d3f6e 562 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 41 526 1.1E-223 T 15-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 D934_05465 f7193db53af4cdeda8d40cdf6b6d3f6e 562 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 37 526 53.058 T 15-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 D934_05465 f7193db53af4cdeda8d40cdf6b6d3f6e 562 SUPERFAMILY SSF51905 20 367 3.89E-24 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_05465 f7193db53af4cdeda8d40cdf6b6d3f6e 562 Gene3D G3DSA:3.30.9.10 146 305 7.4E-8 T 15-10-2018 D934_05465 f7193db53af4cdeda8d40cdf6b6d3f6e 562 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 41 524 1.4E-196 T 15-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 D934_04915 e4fb05d48bc5d78b319a02ba35fd37a0 188 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 23 148 3.1E-22 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D934_04915 e4fb05d48bc5d78b319a02ba35fd37a0 188 SUPERFAMILY SSF55083 18 168 1.7E-37 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D934_04915 e4fb05d48bc5d78b319a02ba35fd37a0 188 Gene3D G3DSA:3.30.70.560 18 171 1.9E-34 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D934_04915 e4fb05d48bc5d78b319a02ba35fd37a0 188 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 21 148 4.7E-31 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D934_00060 c53dc4abe81c9c230660bbbf4efc96af 172 Gene3D G3DSA:3.30.160.70 4 74 1.0E-15 T 15-10-2018 D934_00060 c53dc4abe81c9c230660bbbf4efc96af 172 SUPERFAMILY SSF53155 4 82 1.04E-17 T 15-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 D934_00060 c53dc4abe81c9c230660bbbf4efc96af 172 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 74 7.8E-5 T 15-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 D934_00060 c53dc4abe81c9c230660bbbf4efc96af 172 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 159 2.1E-30 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 D934_00060 c53dc4abe81c9c230660bbbf4efc96af 172 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 8 159 44.462 T 15-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 D934_00060 c53dc4abe81c9c230660bbbf4efc96af 172 Gene3D G3DSA:1.10.10.10 78 163 1.3E-32 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_00060 c53dc4abe81c9c230660bbbf4efc96af 172 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 158 2.8E-33 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 D934_00060 c53dc4abe81c9c230660bbbf4efc96af 172 SUPERFAMILY SSF46767 78 159 6.15E-30 T 15-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 D934_00060 c53dc4abe81c9c230660bbbf4efc96af 172 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 129 135 - T 15-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 D934_12640 3f084a3c594cf05605709b70d27fa42d 148 Gene3D G3DSA:3.30.460.10 31 144 3.4E-37 T 15-10-2018 D934_12640 3f084a3c594cf05605709b70d27fa42d 148 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 13 132 24.978 T 15-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS D934_12640 3f084a3c594cf05605709b70d27fa42d 148 Pfam PF02410 Ribosomal silencing factor during starvation 37 131 1.2E-27 T 15-10-2018 D934_12640 3f084a3c594cf05605709b70d27fa42d 148 SUPERFAMILY SSF81301 34 138 3.6E-38 T 15-10-2018 D934_12640 3f084a3c594cf05605709b70d27fa42d 148 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 34 131 9.0E-37 T 15-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS D934_02245 2030368064ac5fa7747bb841180c3a6a 196 Gene3D G3DSA:3.90.220.20 118 128 9.2E-8 T 15-10-2018 D934_02245 2030368064ac5fa7747bb841180c3a6a 196 SUPERFAMILY SSF116734 29 177 4.74E-13 T 15-10-2018 D934_02245 2030368064ac5fa7747bb841180c3a6a 196 Gene3D G3DSA:1.10.287.1120 129 185 9.2E-8 T 15-10-2018 D934_13285 c117ace841ec5d2e43505f4477c5fcf1 89 Gene3D G3DSA:1.10.1200.10 7 88 7.2E-17 T 15-10-2018 IPR036736 ACP-like superfamily D934_13285 c117ace841ec5d2e43505f4477c5fcf1 89 SUPERFAMILY SSF47336 8 86 4.84E-11 T 15-10-2018 IPR036736 ACP-like superfamily D934_13285 c117ace841ec5d2e43505f4477c5fcf1 89 Pfam PF00550 Phosphopantetheine attachment site 11 65 5.3E-8 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain D934_11375 2e786dd1103022091ad7488b256ec1e5 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.163 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_11375 2e786dd1103022091ad7488b256ec1e5 41 SUPERFAMILY SSF57840 1 40 8.5E-14 T 15-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_11375 2e786dd1103022091ad7488b256ec1e5 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 40 3.6E-9 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_11375 2e786dd1103022091ad7488b256ec1e5 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_11375 2e786dd1103022091ad7488b256ec1e5 41 Pfam PF00444 Ribosomal protein L36 1 40 8.0E-17 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_02795 14435f0bfe37b4f283dae19b851832cb 630 Pfam PF00920 Dehydratase family 68 598 1.6E-149 T 15-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D934_02795 14435f0bfe37b4f283dae19b851832cb 630 SUPERFAMILY SSF143975 4 420 5.1E-136 T 15-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D934_02795 14435f0bfe37b4f283dae19b851832cb 630 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D934_02795 14435f0bfe37b4f283dae19b851832cb 630 Gene3D G3DSA:3.50.30.80 421 570 6.6E-46 T 15-10-2018 D934_02795 14435f0bfe37b4f283dae19b851832cb 630 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 3 603 55.557 T 15-10-2018 D934_02795 14435f0bfe37b4f283dae19b851832cb 630 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 602 2.8E-273 T 15-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 D934_02795 14435f0bfe37b4f283dae19b851832cb 630 SUPERFAMILY SSF52016 421 600 3.22E-50 T 15-10-2018 D934_02795 14435f0bfe37b4f283dae19b851832cb 630 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D934_09635 16e43bd6fe67893a3c82aacb75f48b3d 221 SUPERFAMILY SSF53335 33 220 1.23E-29 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_09635 16e43bd6fe67893a3c82aacb75f48b3d 221 PIRSF PIRSF003078 5 221 1.0E-63 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 D934_09635 16e43bd6fe67893a3c82aacb75f48b3d 221 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 41 220 3.4E-58 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 D934_09635 16e43bd6fe67893a3c82aacb75f48b3d 221 Gene3D G3DSA:3.40.50.150 15 221 8.1E-60 T 15-10-2018 D934_09635 16e43bd6fe67893a3c82aacb75f48b3d 221 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 29 217 26.299 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 D934_09635 16e43bd6fe67893a3c82aacb75f48b3d 221 Pfam PF02527 rRNA small subunit methyltransferase G 40 216 1.0E-51 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 D934_10245 db2a73ead61ec07139d2b0626d982c10 77 Pfam PF13274 Protein of unknown function (DUF4065) 2 50 8.1E-10 T 15-10-2018 IPR025272 Domain of unknown function DUF4065 D934_02520 fe28d0b5ed51db488855c90c1cf91d5e 336 SUPERFAMILY SSF53671 2 334 4.98E-71 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D934_02520 fe28d0b5ed51db488855c90c1cf91d5e 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 35 57 1.2E-10 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_02520 fe28d0b5ed51db488855c90c1cf91d5e 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 315 329 1.2E-10 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_02520 fe28d0b5ed51db488855c90c1cf91d5e 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 147 164 1.2E-10 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_02520 fe28d0b5ed51db488855c90c1cf91d5e 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 161 4.9E-35 T 15-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 D934_02520 fe28d0b5ed51db488855c90c1cf91d5e 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 170 332 2.3E-31 T 15-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 D934_02520 fe28d0b5ed51db488855c90c1cf91d5e 336 Gene3D G3DSA:3.40.50.1370 5 167 1.9E-114 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D934_02520 fe28d0b5ed51db488855c90c1cf91d5e 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 287 296 2.5E-10 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D934_02520 fe28d0b5ed51db488855c90c1cf91d5e 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 2.5E-10 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D934_02520 fe28d0b5ed51db488855c90c1cf91d5e 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 2.5E-10 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D934_02520 fe28d0b5ed51db488855c90c1cf91d5e 336 Gene3D G3DSA:3.40.50.1370 168 331 1.9E-114 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D934_12540 792e48dadc83bd2d0dbf99d5517b538a 249 SUPERFAMILY SSF56112 45 221 4.72E-20 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily D934_12540 792e48dadc83bd2d0dbf99d5517b538a 249 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 10 243 38.912 T 15-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 D934_12540 792e48dadc83bd2d0dbf99d5517b538a 249 Gene3D G3DSA:1.10.510.10 149 247 6.0E-11 T 15-10-2018 D934_12540 792e48dadc83bd2d0dbf99d5517b538a 249 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 40 241 1.8E-74 T 15-10-2018 D934_00010 7b72bf41218980e4838c5238d7e8b6f3 250 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 240 6.8E-94 T 15-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 D934_00010 7b72bf41218980e4838c5238d7e8b6f3 250 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 210 4.5E-7 T 15-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 D934_00010 7b72bf41218980e4838c5238d7e8b6f3 250 SUPERFAMILY SSF56300 1 228 7.43E-30 T 15-10-2018 D934_00010 7b72bf41218980e4838c5238d7e8b6f3 250 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 249 108.205 T 15-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 D934_00010 7b72bf41218980e4838c5238d7e8b6f3 250 Gene3D G3DSA:3.60.21.10 1 241 6.8E-13 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like D934_10365 85a7e6ca1984dfc0f60086c04965b04f 262 SUPERFAMILY SSF51206 56 187 3.01E-23 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like D934_10365 85a7e6ca1984dfc0f60086c04965b04f 262 SMART SM00100 50 169 3.0E-21 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain D934_10365 85a7e6ca1984dfc0f60086c04965b04f 262 Gene3D G3DSA:1.10.10.10 191 259 2.5E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_10365 85a7e6ca1984dfc0f60086c04965b04f 262 Pfam PF00325 Bacterial regulatory proteins, crp family 218 249 1.0E-13 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D934_10365 85a7e6ca1984dfc0f60086c04965b04f 262 Pfam PF00027 Cyclic nucleotide-binding domain 68 155 1.2E-17 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain D934_10365 85a7e6ca1984dfc0f60086c04965b04f 262 SMART SM00419 212 260 2.5E-12 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D934_10365 85a7e6ca1984dfc0f60086c04965b04f 262 Gene3D G3DSA:2.60.120.10 57 190 2.6E-48 T 15-10-2018 IPR014710 RmlC-like jelly roll fold D934_10365 85a7e6ca1984dfc0f60086c04965b04f 262 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 218 234 3.1E-6 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D934_10365 85a7e6ca1984dfc0f60086c04965b04f 262 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 234 249 3.1E-6 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D934_10365 85a7e6ca1984dfc0f60086c04965b04f 262 SUPERFAMILY SSF46785 191 259 1.47E-12 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_10365 85a7e6ca1984dfc0f60086c04965b04f 262 ProSitePatterns PS00042 Crp-type HTH domain signature. 220 243 - T 15-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 D934_04610 a6e40f6fa722953b985ff81ba750eb30 202 Pfam PF00510 Cytochrome c oxidase subunit III 24 200 4.5E-13 T 15-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04610 a6e40f6fa722953b985ff81ba750eb30 202 SUPERFAMILY SSF81452 12 200 1.03E-56 T 15-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04610 a6e40f6fa722953b985ff81ba750eb30 202 Gene3D G3DSA:1.20.120.80 17 202 3.6E-58 T 15-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D934_04610 a6e40f6fa722953b985ff81ba750eb30 202 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 23 202 2.4E-82 T 15-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 D934_11330 95155740589851cb96cad9c95a772103 291 Hamap MF_01576 Bifunctional protein FolD [folD]. 8 290 36.731 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D934_11330 95155740589851cb96cad9c95a772103 291 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 129 288 6.7E-64 T 15-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D934_11330 95155740589851cb96cad9c95a772103 291 SUPERFAMILY SSF51735 128 287 2.53E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_11330 95155740589851cb96cad9c95a772103 291 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 10 126 5.9E-35 T 15-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D934_11330 95155740589851cb96cad9c95a772103 291 Gene3D G3DSA:3.40.50.10860 13 283 3.3E-100 T 15-10-2018 D934_11330 95155740589851cb96cad9c95a772103 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 160 180 2.2E-80 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D934_11330 95155740589851cb96cad9c95a772103 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 263 281 2.2E-80 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D934_11330 95155740589851cb96cad9c95a772103 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 80 107 2.2E-80 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D934_11330 95155740589851cb96cad9c95a772103 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 211 240 2.2E-80 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D934_11330 95155740589851cb96cad9c95a772103 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 246 262 2.2E-80 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D934_11330 95155740589851cb96cad9c95a772103 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 115 136 2.2E-80 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D934_11330 95155740589851cb96cad9c95a772103 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 39 61 2.2E-80 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D934_11330 95155740589851cb96cad9c95a772103 291 Gene3D G3DSA:3.40.50.720 11 266 3.3E-100 T 15-10-2018 D934_11330 95155740589851cb96cad9c95a772103 291 SUPERFAMILY SSF53223 8 127 1.06E-36 T 15-10-2018 D934_11330 95155740589851cb96cad9c95a772103 291 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 267 275 - T 15-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D934_09165 adb625c18ebf0d1c69ee3198d587aca3 442 Pfam PF05707 Zonular occludens toxin (Zot) 1 200 1.3E-49 T 15-10-2018 IPR008900 Zona occludens toxin D934_09165 adb625c18ebf0d1c69ee3198d587aca3 442 Gene3D G3DSA:3.40.50.300 2 198 1.9E-29 T 15-10-2018 D934_04935 30636d1fd4d2a9c4722f50d55d2dfae5 334 Pfam PF02685 Glucokinase 16 329 4.5E-101 T 15-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 D934_04935 30636d1fd4d2a9c4722f50d55d2dfae5 334 Gene3D G3DSA:3.40.367.20 115 314 7.6E-90 T 15-10-2018 D934_04935 30636d1fd4d2a9c4722f50d55d2dfae5 334 Gene3D G3DSA:3.30.420.40 16 325 7.6E-90 T 15-10-2018 D934_04935 30636d1fd4d2a9c4722f50d55d2dfae5 334 SUPERFAMILY SSF53067 15 329 4.46E-50 T 15-10-2018 D934_06045 f721ff5a2b6e4c16e7879f1500ad8d6e 688 Pfam PF07676 WD40-like Beta Propeller Repeat 90 114 0.0061 T 15-10-2018 IPR011659 WD40-like Beta Propeller D934_06045 f721ff5a2b6e4c16e7879f1500ad8d6e 688 Pfam PF07676 WD40-like Beta Propeller Repeat 281 303 0.019 T 15-10-2018 IPR011659 WD40-like Beta Propeller D934_06045 f721ff5a2b6e4c16e7879f1500ad8d6e 688 Gene3D G3DSA:2.120.10.30 17 178 6.5E-21 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D934_06045 f721ff5a2b6e4c16e7879f1500ad8d6e 688 SUPERFAMILY SSF82171 33 409 6.02E-35 T 15-10-2018 D934_06045 f721ff5a2b6e4c16e7879f1500ad8d6e 688 SUPERFAMILY SSF53474 431 686 9.76E-69 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_06045 f721ff5a2b6e4c16e7879f1500ad8d6e 688 Gene3D G3DSA:2.120.10.30 179 434 7.4E-18 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D934_06045 f721ff5a2b6e4c16e7879f1500ad8d6e 688 Pfam PF00326 Prolyl oligopeptidase family 478 687 9.5E-60 T 15-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 D934_06045 f721ff5a2b6e4c16e7879f1500ad8d6e 688 Gene3D G3DSA:3.40.50.1820 435 686 9.4E-64 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_08725 77fea1047e7a9f65068d999016573c42 461 Gene3D G3DSA:3.30.465.40 7 236 2.7E-72 T 15-10-2018 D934_08725 77fea1047e7a9f65068d999016573c42 461 Gene3D G3DSA:3.30.70.2740 336 417 5.0E-17 T 15-10-2018 D934_08725 77fea1047e7a9f65068d999016573c42 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 457 8.3E-70 T 15-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 D934_08725 77fea1047e7a9f65068d999016573c42 461 SUPERFAMILY SSF55103 192 458 1.31E-61 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 D934_08725 77fea1047e7a9f65068d999016573c42 461 Pfam PF01565 FAD binding domain 44 182 8.3E-42 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 D934_08725 77fea1047e7a9f65068d999016573c42 461 SUPERFAMILY SSF56176 7 219 1.45E-70 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D934_08725 77fea1047e7a9f65068d999016573c42 461 Gene3D G3DSA:1.10.45.10 418 458 1.6E-16 T 15-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 D934_07615 b8de0c53738653a6c1b899aab50fa625 536 SMART SM00245 321 509 9.2E-9 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D934_07615 b8de0c53738653a6c1b899aab50fa625 536 Pfam PF03572 Peptidase family S41 354 507 3.2E-21 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D934_07615 b8de0c53738653a6c1b899aab50fa625 536 Gene3D G3DSA:2.30.42.10 130 169 1.4E-6 T 15-10-2018 D934_07615 b8de0c53738653a6c1b899aab50fa625 536 Gene3D G3DSA:2.30.42.10 265 335 4.4E-31 T 15-10-2018 D934_07615 b8de0c53738653a6c1b899aab50fa625 536 Gene3D G3DSA:3.30.750.44 49 129 1.4E-6 T 15-10-2018 D934_07615 b8de0c53738653a6c1b899aab50fa625 536 Gene3D G3DSA:3.30.750.44 470 484 4.4E-31 T 15-10-2018 D934_07615 b8de0c53738653a6c1b899aab50fa625 536 SUPERFAMILY SSF52096 272 527 1.14E-47 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D934_07615 b8de0c53738653a6c1b899aab50fa625 536 Gene3D G3DSA:3.90.226.10 336 506 4.4E-31 T 15-10-2018 D934_07615 b8de0c53738653a6c1b899aab50fa625 536 Pfam PF14684 Tricorn protease C1 domain 47 105 1.8E-8 T 15-10-2018 IPR028204 Tricorn protease C1 domain D934_13835 8d5000593de8263f4fbf93444c1d9c4d 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 385 399 3.2E-24 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_13835 8d5000593de8263f4fbf93444c1d9c4d 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 370 384 3.2E-24 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_13835 8d5000593de8263f4fbf93444c1d9c4d 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 313 335 3.2E-24 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_13835 8d5000593de8263f4fbf93444c1d9c4d 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 85 104 3.2E-24 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_13835 8d5000593de8263f4fbf93444c1d9c4d 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 452 465 3.2E-24 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_13835 8d5000593de8263f4fbf93444c1d9c4d 498 Gene3D G3DSA:3.40.710.10 287 493 1.7E-53 T 15-10-2018 D934_13835 8d5000593de8263f4fbf93444c1d9c4d 498 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 45 483 4.4E-106 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_13835 8d5000593de8263f4fbf93444c1d9c4d 498 SUPERFAMILY SSF56601 53 488 6.58E-89 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D934_13835 8d5000593de8263f4fbf93444c1d9c4d 498 Gene3D G3DSA:3.50.80.20 109 213 8.7E-22 T 15-10-2018 D934_13835 8d5000593de8263f4fbf93444c1d9c4d 498 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 72 475 1.2E-97 T 15-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D934_12595 b1f9229fc15b5eab42efcf25815f16c6 204 Pfam PF01161 Phosphatidylethanolamine-binding protein 27 196 7.0E-34 T 15-10-2018 IPR008914 Phosphatidylethanolamine-binding protein D934_12595 b1f9229fc15b5eab42efcf25815f16c6 204 Gene3D G3DSA:3.90.280.10 1 198 6.7E-44 T 15-10-2018 IPR036610 PEBP-like superfamily D934_12595 b1f9229fc15b5eab42efcf25815f16c6 204 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 28 196 1.0E-22 T 15-10-2018 IPR005247 YbhB/YbcL D934_12595 b1f9229fc15b5eab42efcf25815f16c6 204 SUPERFAMILY SSF49777 1 199 1.44E-39 T 15-10-2018 IPR036610 PEBP-like superfamily D934_09675 0481d7ffb8dc60a5364f1a505a71f933 135 Gene3D G3DSA:4.10.520.10 37 135 1.5E-13 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D934_09675 0481d7ffb8dc60a5364f1a505a71f933 135 SMART SM00411 38 135 7.5E-5 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_09675 0481d7ffb8dc60a5364f1a505a71f933 135 Pfam PF00216 Bacterial DNA-binding protein 39 133 1.9E-16 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D934_09675 0481d7ffb8dc60a5364f1a505a71f933 135 SUPERFAMILY SSF47729 38 133 3.68E-14 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D934_10645 e8e0444225c5dd9331aa1b12e3d7b76b 98 Pfam PF13986 Domain of unknown function (DUF4224) 25 68 3.5E-20 T 15-10-2018 IPR025319 Domain of unknown function DUF4224 D934_04040 466ee3a04e35dfa85f443e87429830e4 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 326 350 - T 15-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_04040 466ee3a04e35dfa85f443e87429830e4 373 Pfam PF01098 Cell cycle protein 23 369 9.5E-98 T 15-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_04040 466ee3a04e35dfa85f443e87429830e4 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 368 3.3E-117 T 15-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_04040 466ee3a04e35dfa85f443e87429830e4 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 14 371 26.952 T 15-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_09790 bdc556258e5457e11a20bfeae5465c99 840 Pfam PF04851 Type III restriction enzyme, res subunit 43 201 6.0E-6 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 D934_09790 bdc556258e5457e11a20bfeae5465c99 840 Gene3D G3DSA:3.40.50.300 21 218 3.1E-14 T 15-10-2018 D934_09790 bdc556258e5457e11a20bfeae5465c99 840 SUPERFAMILY SSF52540 43 208 1.03E-15 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_09790 bdc556258e5457e11a20bfeae5465c99 840 SUPERFAMILY SSF52540 48 382 1.59E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_07385 302ba52216d82c8bd4a54278649dc61c 319 Pfam PF01882 Protein of unknown function DUF58 213 289 4.8E-13 T 15-10-2018 IPR002881 Domain of unknown function DUF58 D934_07930 2da83a69f250e0580df40d1afd5853b9 227 Gene3D G3DSA:1.10.10.10 123 227 1.0E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_07930 2da83a69f250e0580df40d1afd5853b9 227 SMART SM00862 145 220 3.4E-25 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D934_07930 2da83a69f250e0580df40d1afd5853b9 227 Pfam PF00072 Response regulator receiver domain 3 113 2.2E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_07930 2da83a69f250e0580df40d1afd5853b9 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 4.3E-24 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D934_07930 2da83a69f250e0580df40d1afd5853b9 227 SMART SM00448 1 112 3.2E-39 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_07930 2da83a69f250e0580df40d1afd5853b9 227 Gene3D G3DSA:3.40.50.2300 1 121 6.4E-40 T 15-10-2018 D934_07930 2da83a69f250e0580df40d1afd5853b9 227 SUPERFAMILY SSF52172 1 169 2.11E-38 T 15-10-2018 IPR011006 CheY-like superfamily D934_04975 db4e378d4c3d64d7694ad1ead5bcb194 284 Pfam PF01522 Polysaccharide deacetylase 56 223 1.0E-37 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 D934_04975 db4e378d4c3d64d7694ad1ead5bcb194 284 SUPERFAMILY SSF88713 21 250 2.45E-40 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D934_04975 db4e378d4c3d64d7694ad1ead5bcb194 284 Gene3D G3DSA:3.20.20.370 1 251 8.9E-60 T 15-10-2018 D934_10240 b939333f8a0ac7282f16a277531d5850 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 622 6.2E-265 T 15-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 D934_10240 b939333f8a0ac7282f16a277531d5850 629 Pfam PF01134 Glucose inhibited division protein A 9 398 2.1E-162 T 15-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 D934_10240 b939333f8a0ac7282f16a277531d5850 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 15-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 D934_10240 b939333f8a0ac7282f16a277531d5850 629 Gene3D G3DSA:1.10.150.570 570 622 1.9E-22 T 15-10-2018 D934_10240 b939333f8a0ac7282f16a277531d5850 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 15-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 D934_10240 b939333f8a0ac7282f16a277531d5850 629 Gene3D G3DSA:1.10.10.1800 460 551 4.3E-25 T 15-10-2018 D934_10240 b939333f8a0ac7282f16a277531d5850 629 SUPERFAMILY SSF51905 8 262 9.47E-46 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_10240 b939333f8a0ac7282f16a277531d5850 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 625 41.551 T 15-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 D934_10240 b939333f8a0ac7282f16a277531d5850 629 Pfam PF13932 GidA associated domain 403 617 3.0E-72 T 15-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 D934_10240 b939333f8a0ac7282f16a277531d5850 629 Gene3D G3DSA:3.50.50.60 309 459 7.2E-56 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_10240 b939333f8a0ac7282f16a277531d5850 629 Gene3D G3DSA:3.50.50.60 2 232 3.1E-84 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_10240 b939333f8a0ac7282f16a277531d5850 629 SMART SM01228 547 618 6.5E-40 T 15-10-2018 D934_05060 f812c840416e423a2d8570d0d4913bce 360 SUPERFAMILY SSF69279 7 186 5.67E-13 T 15-10-2018 D934_05060 f812c840416e423a2d8570d0d4913bce 360 Pfam PF05954 Phage late control gene D protein (GPD) 36 320 7.1E-30 T 15-10-2018 D934_02895 f812c840416e423a2d8570d0d4913bce 360 SUPERFAMILY SSF69279 7 186 5.67E-13 T 15-10-2018 D934_02895 f812c840416e423a2d8570d0d4913bce 360 Pfam PF05954 Phage late control gene D protein (GPD) 36 320 7.1E-30 T 15-10-2018 D934_12850 cf3e8f910b511ec790d3630022454173 370 Pfam PF13439 Glycosyltransferase Family 4 13 161 9.0E-18 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D934_12850 cf3e8f910b511ec790d3630022454173 370 Pfam PF13692 Glycosyl transferases group 1 185 320 6.5E-21 T 15-10-2018 D934_12850 cf3e8f910b511ec790d3630022454173 370 Gene3D G3DSA:3.40.50.2000 1 170 3.8E-15 T 15-10-2018 D934_12850 cf3e8f910b511ec790d3630022454173 370 Gene3D G3DSA:3.40.50.2000 171 342 1.3E-35 T 15-10-2018 D934_12850 cf3e8f910b511ec790d3630022454173 370 SUPERFAMILY SSF53756 3 361 7.73E-72 T 15-10-2018 D934_00890 fa11951d78b3de266344dc27cc63d153 451 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 124 4.8E-37 T 15-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 D934_00890 fa11951d78b3de266344dc27cc63d153 451 Gene3D G3DSA:3.30.1360.120 1 125 8.4E-41 T 15-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 D934_00890 fa11951d78b3de266344dc27cc63d153 451 Gene3D G3DSA:3.40.50.300 221 380 4.1E-93 T 15-10-2018 D934_00890 fa11951d78b3de266344dc27cc63d153 451 Pfam PF12631 MnmE helical domain 127 448 1.7E-50 T 15-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 D934_00890 fa11951d78b3de266344dc27cc63d153 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 224 340 5.3E-20 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D934_00890 fa11951d78b3de266344dc27cc63d153 451 SUPERFAMILY SSF116878 125 451 1.05E-42 T 15-10-2018 D934_00890 fa11951d78b3de266344dc27cc63d153 451 Pfam PF01926 50S ribosome-binding GTPase 224 312 1.6E-23 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_00890 fa11951d78b3de266344dc27cc63d153 451 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 451 31.042 T 15-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 D934_00890 fa11951d78b3de266344dc27cc63d153 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 290 308 3.4E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_00890 fa11951d78b3de266344dc27cc63d153 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 223 243 3.4E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_00890 fa11951d78b3de266344dc27cc63d153 451 SUPERFAMILY SSF52540 76 367 5.84E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00890 fa11951d78b3de266344dc27cc63d153 451 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 451 3.9E-96 T 15-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 D934_00890 fa11951d78b3de266344dc27cc63d153 451 Gene3D G3DSA:1.20.120.430 126 451 4.1E-93 T 15-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 D934_02755 69bf57cd12602f1ff4eec3713ce2fa64 106 Pfam PF08850 Domain of unknown function (DUF1820) 5 99 7.6E-38 T 15-10-2018 IPR014949 Protein of unknown function DUF1820 D934_02755 69bf57cd12602f1ff4eec3713ce2fa64 106 PIRSF PIRSF028538 1 106 1.9E-45 T 15-10-2018 IPR014949 Protein of unknown function DUF1820 D934_05485 1291d0bf119b740a0d7a7e153f95a105 334 Pfam PF00849 RNA pseudouridylate synthase 101 251 4.0E-33 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_05485 1291d0bf119b740a0d7a7e153f95a105 334 Gene3D G3DSA:3.10.290.10 15 80 9.6E-17 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D934_05485 1291d0bf119b740a0d7a7e153f95a105 334 Pfam PF01479 S4 domain 28 74 1.8E-6 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_05485 1291d0bf119b740a0d7a7e153f95a105 334 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 144 158 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_05485 1291d0bf119b740a0d7a7e153f95a105 334 SUPERFAMILY SSF55174 27 114 1.23E-8 T 15-10-2018 D934_05485 1291d0bf119b740a0d7a7e153f95a105 334 Gene3D G3DSA:3.30.2350.10 94 325 8.0E-71 T 15-10-2018 D934_05485 1291d0bf119b740a0d7a7e153f95a105 334 SUPERFAMILY SSF55120 86 324 6.37E-76 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_05485 1291d0bf119b740a0d7a7e153f95a105 334 SMART SM00363 28 92 0.0014 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_05485 1291d0bf119b740a0d7a7e153f95a105 334 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 26 322 6.6E-91 T 15-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_01280 37ca15f36715fd2bceb3bc62d074abb4 450 Pfam PF01926 50S ribosome-binding GTPase 200 318 4.3E-22 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_01280 37ca15f36715fd2bceb3bc62d074abb4 450 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 199 360 2.4E-12 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D934_01280 37ca15f36715fd2bceb3bc62d074abb4 450 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 6.6E-12 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_01280 37ca15f36715fd2bceb3bc62d074abb4 450 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 6.6E-12 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_01280 37ca15f36715fd2bceb3bc62d074abb4 450 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 6.6E-12 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_01280 37ca15f36715fd2bceb3bc62d074abb4 450 Gene3D G3DSA:3.40.50.11060 18 138 6.2E-35 T 15-10-2018 D934_01280 37ca15f36715fd2bceb3bc62d074abb4 450 SUPERFAMILY SSF52540 198 373 1.85E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_01280 37ca15f36715fd2bceb3bc62d074abb4 450 Pfam PF16360 GTP-binding GTPase Middle Region 114 193 3.2E-26 T 15-10-2018 IPR032305 GTP-binding protein, middle domain D934_01280 37ca15f36715fd2bceb3bc62d074abb4 450 Gene3D G3DSA:3.40.50.300 198 374 1.0E-40 T 15-10-2018 D934_01280 37ca15f36715fd2bceb3bc62d074abb4 450 Pfam PF13167 GTP-binding GTPase N-terminal 26 112 6.0E-28 T 15-10-2018 IPR025121 GTPase HflX, N-terminal D934_01280 37ca15f36715fd2bceb3bc62d074abb4 450 PIRSF PIRSF006809 3 424 4.4E-139 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 D934_01280 37ca15f36715fd2bceb3bc62d074abb4 450 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 364 8.2E-143 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 D934_01280 37ca15f36715fd2bceb3bc62d074abb4 450 Hamap MF_00900 GTPase HflX [hflX]. 27 394 45.992 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 D934_13375 3bd916de5d446d3c77915b16b8c08d26 366 Gene3D G3DSA:3.40.50.150 189 363 1.4E-50 T 15-10-2018 D934_13375 3bd916de5d446d3c77915b16b8c08d26 366 Gene3D G3DSA:3.30.70.2810 16 93 1.8E-18 T 15-10-2018 D934_13375 3bd916de5d446d3c77915b16b8c08d26 366 Gene3D G3DSA:3.30.2300.20 94 188 7.3E-23 T 15-10-2018 D934_13375 3bd916de5d446d3c77915b16b8c08d26 366 Pfam PF01728 FtsJ-like methyltransferase 199 267 2.9E-5 T 15-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 D934_13375 3bd916de5d446d3c77915b16b8c08d26 366 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 16 364 67.29 T 15-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 D934_13375 3bd916de5d446d3c77915b16b8c08d26 366 SUPERFAMILY SSF53335 198 308 2.85E-12 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_13375 3bd916de5d446d3c77915b16b8c08d26 366 PIRSF PIRSF028774 16 366 6.1E-157 T 15-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 D934_10620 2946d27d97f337f5661d7e39d2bf110e 159 SUPERFAMILY SSF46785 10 149 5.42E-26 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_10620 2946d27d97f337f5661d7e39d2bf110e 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 4.6E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_10620 2946d27d97f337f5661d7e39d2bf110e 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 4.6E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_10620 2946d27d97f337f5661d7e39d2bf110e 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 4.6E-5 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_10620 2946d27d97f337f5661d7e39d2bf110e 159 Gene3D G3DSA:1.10.10.10 1 159 9.8E-36 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_10620 2946d27d97f337f5661d7e39d2bf110e 159 Pfam PF01047 MarR family 46 101 4.9E-8 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_10620 2946d27d97f337f5661d7e39d2bf110e 159 SMART SM00347 37 137 1.4E-7 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_11715 ae0716de1ac20a2d03a37a983aae960d 220 Pfam PF01694 Rhomboid family 52 201 1.5E-37 T 15-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 D934_11715 ae0716de1ac20a2d03a37a983aae960d 220 SUPERFAMILY SSF144091 4 201 1.06E-41 T 15-10-2018 D934_11715 ae0716de1ac20a2d03a37a983aae960d 220 Gene3D G3DSA:1.20.1540.10 2 200 3.0E-33 T 15-10-2018 IPR035952 Rhomboid-like superfamily D934_11715 ae0716de1ac20a2d03a37a983aae960d 220 SMART SM01160 49 138 0.0019 T 15-10-2018 D934_05965 c9b2dd345a53201ca479dcc751444933 514 SMART SM00228 299 381 3.5E-10 T 15-10-2018 IPR001478 PDZ domain GO:0005515 D934_05965 c9b2dd345a53201ca479dcc751444933 514 Pfam PF13365 Trypsin-like peptidase domain 126 260 3.5E-36 T 15-10-2018 D934_05965 c9b2dd345a53201ca479dcc751444933 514 SUPERFAMILY SSF50156 257 382 5.52E-23 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 D934_05965 c9b2dd345a53201ca479dcc751444933 514 SUPERFAMILY SSF50494 53 291 3.07E-67 T 15-10-2018 IPR009003 Peptidase S1, PA clan D934_05965 c9b2dd345a53201ca479dcc751444933 514 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 55 509 6.3E-157 T 15-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 D934_05965 c9b2dd345a53201ca479dcc751444933 514 Gene3D G3DSA:2.30.42.10 422 513 9.7E-7 T 15-10-2018 D934_05965 c9b2dd345a53201ca479dcc751444933 514 Gene3D G3DSA:2.30.42.10 294 400 1.0E-24 T 15-10-2018 D934_05965 c9b2dd345a53201ca479dcc751444933 514 SUPERFAMILY SSF50156 461 510 5.46E-5 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 D934_05965 c9b2dd345a53201ca479dcc751444933 514 Gene3D G3DSA:2.40.10.120 54 292 2.1E-82 T 15-10-2018 D934_05965 c9b2dd345a53201ca479dcc751444933 514 Pfam PF13180 PDZ domain 301 390 8.4E-15 T 15-10-2018 IPR001478 PDZ domain GO:0005515 D934_05965 c9b2dd345a53201ca479dcc751444933 514 PRINTS PR00834 HtrA/DegQ protease family signature 196 220 2.1E-49 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D934_05965 c9b2dd345a53201ca479dcc751444933 514 PRINTS PR00834 HtrA/DegQ protease family signature 231 248 2.1E-49 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D934_05965 c9b2dd345a53201ca479dcc751444933 514 PRINTS PR00834 HtrA/DegQ protease family signature 253 270 2.1E-49 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D934_05965 c9b2dd345a53201ca479dcc751444933 514 PRINTS PR00834 HtrA/DegQ protease family signature 135 147 2.1E-49 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D934_05965 c9b2dd345a53201ca479dcc751444933 514 PRINTS PR00834 HtrA/DegQ protease family signature 156 176 2.1E-49 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D934_05965 c9b2dd345a53201ca479dcc751444933 514 PRINTS PR00834 HtrA/DegQ protease family signature 339 351 2.1E-49 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D934_03980 4a1dd32281e35424a0dcdece52bbeb96 213 SUPERFAMILY SSF159594 30 200 1.46E-44 T 15-10-2018 D934_03980 4a1dd32281e35424a0dcdece52bbeb96 213 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 32 192 4.4E-34 T 15-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component D934_03980 4a1dd32281e35424a0dcdece52bbeb96 213 Gene3D G3DSA:3.40.50.10610 20 210 1.0E-65 T 15-10-2018 D934_02750 5a334e6c23b67908a001adbcd3880e01 226 Pfam PF01694 Rhomboid family 64 217 3.1E-34 T 15-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 D934_02750 5a334e6c23b67908a001adbcd3880e01 226 Gene3D G3DSA:1.20.1540.10 14 223 1.6E-26 T 15-10-2018 IPR035952 Rhomboid-like superfamily D934_02750 5a334e6c23b67908a001adbcd3880e01 226 SUPERFAMILY SSF144091 12 221 7.06E-33 T 15-10-2018 D934_01840 14ad0f815e2e0a669dffdaf939e65399 122 Gene3D G3DSA:1.10.287.110 47 122 1.1E-14 T 15-10-2018 IPR036869 Chaperone J-domain superfamily D934_01840 14ad0f815e2e0a669dffdaf939e65399 122 SMART SM00271 58 121 5.1E-13 T 15-10-2018 IPR001623 DnaJ domain D934_01840 14ad0f815e2e0a669dffdaf939e65399 122 Pfam PF00226 DnaJ domain 59 116 1.0E-11 T 15-10-2018 IPR001623 DnaJ domain D934_01840 14ad0f815e2e0a669dffdaf939e65399 122 SUPERFAMILY SSF46565 54 118 9.29E-20 T 15-10-2018 IPR036869 Chaperone J-domain superfamily D934_01840 14ad0f815e2e0a669dffdaf939e65399 122 PRINTS PR00625 DnaJ domain signature 79 94 2.7E-9 T 15-10-2018 IPR001623 DnaJ domain D934_01840 14ad0f815e2e0a669dffdaf939e65399 122 PRINTS PR00625 DnaJ domain signature 101 121 2.7E-9 T 15-10-2018 IPR001623 DnaJ domain D934_01840 14ad0f815e2e0a669dffdaf939e65399 122 PRINTS PR00625 DnaJ domain signature 61 79 2.7E-9 T 15-10-2018 IPR001623 DnaJ domain D934_00105 1b2644de0ce2b6c4aadccfbe2d314b01 220 Pfam PF00072 Response regulator receiver domain 5 116 3.7E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_00105 1b2644de0ce2b6c4aadccfbe2d314b01 220 SMART SM00448 3 116 1.3E-21 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_00105 1b2644de0ce2b6c4aadccfbe2d314b01 220 SUPERFAMILY SSF46894 143 208 7.48E-18 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D934_00105 1b2644de0ce2b6c4aadccfbe2d314b01 220 SUPERFAMILY SSF52172 2 132 4.84E-27 T 15-10-2018 IPR011006 CheY-like superfamily D934_00105 1b2644de0ce2b6c4aadccfbe2d314b01 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 203 2.7E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D934_00105 1b2644de0ce2b6c4aadccfbe2d314b01 220 SMART SM00421 146 203 1.3E-16 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D934_00105 1b2644de0ce2b6c4aadccfbe2d314b01 220 Gene3D G3DSA:3.40.50.12740 3 208 7.7E-51 T 15-10-2018 D934_00105 1b2644de0ce2b6c4aadccfbe2d314b01 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.1E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D934_00105 1b2644de0ce2b6c4aadccfbe2d314b01 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.1E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D934_00105 1b2644de0ce2b6c4aadccfbe2d314b01 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.1E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D934_11165 652982805c49668542ec6f77dad441e7 424 Pfam PF00155 Aminotransferase class I and II 39 391 2.6E-47 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D934_11165 652982805c49668542ec6f77dad441e7 424 SUPERFAMILY SSF53383 12 405 4.92E-89 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D934_11165 652982805c49668542ec6f77dad441e7 424 Gene3D G3DSA:3.40.640.10 58 299 4.3E-119 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D934_11165 652982805c49668542ec6f77dad441e7 424 Gene3D G3DSA:3.90.1150.10 28 402 4.3E-119 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D934_12930 ea6ddf9c19cf562679e83a681896a670 204 Pfam PF09335 SNARE associated Golgi protein 40 163 7.1E-9 T 15-10-2018 IPR032816 SNARE associated Golgi protein D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 Pfam PF00072 Response regulator receiver domain 459 571 5.3E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 Gene3D G3DSA:1.20.120.160 590 707 4.2E-9 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 371 1.3E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 415 1.3E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 396 1.3E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 1.3E-10 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 Gene3D G3DSA:1.10.287.130 169 252 4.3E-25 T 15-10-2018 D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 SUPERFAMILY SSF55874 244 416 1.44E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 SMART SM00448 457 572 1.1E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 301 417 2.6E-21 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 Pfam PF00512 His Kinase A (phospho-acceptor) domain 189 254 4.7E-18 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 Gene3D G3DSA:3.40.50.2300 443 578 2.1E-34 T 15-10-2018 D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 Pfam PF01627 Hpt domain 625 693 2.6E-6 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 SUPERFAMILY SSF47226 595 708 1.7E-13 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 SUPERFAMILY SSF52172 455 577 1.99E-31 T 15-10-2018 IPR011006 CheY-like superfamily D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 SMART SM00387 301 418 1.6E-29 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 Gene3D G3DSA:3.30.565.10 253 423 3.2E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 SMART SM00388 189 254 4.9E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D934_03145 04dbcc7d13a3ccd4208d4508468a9efe 717 SUPERFAMILY SSF47384 172 255 2.75E-21 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D934_07775 43dae7cc9b4a1e5c7297bdf33e9f8ea5 557 Pfam PF05136 Phage portal protein, lambda family 88 421 2.0E-83 T 15-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 D934_07775 43dae7cc9b4a1e5c7297bdf33e9f8ea5 557 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 95 525 5.3E-95 T 15-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 D934_08995 43dae7cc9b4a1e5c7297bdf33e9f8ea5 557 Pfam PF05136 Phage portal protein, lambda family 88 421 2.0E-83 T 15-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 D934_08995 43dae7cc9b4a1e5c7297bdf33e9f8ea5 557 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 95 525 5.3E-95 T 15-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 D934_13520 032a472ca4c86cfa84ffbe3911f72432 581 Gene3D G3DSA:2.40.160.50 202 581 4.7E-93 T 15-10-2018 D934_13520 032a472ca4c86cfa84ffbe3911f72432 581 Pfam PF08479 POTRA domain, ShlB-type 90 169 6.1E-23 T 15-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type D934_13520 032a472ca4c86cfa84ffbe3911f72432 581 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 233 545 2.3E-103 T 15-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal D934_13520 032a472ca4c86cfa84ffbe3911f72432 581 Pfam PF17287 POTRA domain 172 224 3.3E-20 T 15-10-2018 IPR035251 ShlB, POTRA domain D934_13520 032a472ca4c86cfa84ffbe3911f72432 581 PIRSF PIRSF029745 11 581 7.1E-144 T 15-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 Pfam PF13365 Trypsin-like peptidase domain 141 276 1.2E-31 T 15-10-2018 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 PRINTS PR00834 HtrA/DegQ protease family signature 151 163 4.4E-52 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 PRINTS PR00834 HtrA/DegQ protease family signature 212 236 4.4E-52 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 PRINTS PR00834 HtrA/DegQ protease family signature 247 264 4.4E-52 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 PRINTS PR00834 HtrA/DegQ protease family signature 269 286 4.4E-52 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 PRINTS PR00834 HtrA/DegQ protease family signature 358 370 4.4E-52 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 PRINTS PR00834 HtrA/DegQ protease family signature 172 192 4.4E-52 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 SUPERFAMILY SSF50156 317 413 1.84E-21 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 Gene3D G3DSA:2.30.42.10 428 508 7.4E-10 T 15-10-2018 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 91 503 2.2E-128 T 15-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 SMART SM00228 424 500 0.44 T 15-10-2018 IPR001478 PDZ domain GO:0005515 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 SMART SM00228 318 400 6.9E-14 T 15-10-2018 IPR001478 PDZ domain GO:0005515 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 SUPERFAMILY SSF50156 434 502 7.62E-8 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 Gene3D G3DSA:2.40.10.120 89 311 4.3E-79 T 15-10-2018 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 SUPERFAMILY SSF50494 89 314 3.61E-62 T 15-10-2018 IPR009003 Peptidase S1, PA clan D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 Gene3D G3DSA:2.30.42.10 313 417 8.7E-25 T 15-10-2018 D934_02185 e41793163b3c1f5479e5ebf7150067d0 508 Pfam PF13180 PDZ domain 319 409 6.4E-12 T 15-10-2018 IPR001478 PDZ domain GO:0005515 D934_11895 f8472916acffa46b88324aae8204f875 267 Pfam PF10670 Domain of unknown function (DUF4198) 18 242 2.6E-65 T 15-10-2018 IPR019613 Protein of unknown function DUF4198 D934_03360 8b005c9b196ce9473cdf94d3d8a486fe 66 Pfam PF00831 Ribosomal L29 protein 6 58 7.9E-21 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03360 8b005c9b196ce9473cdf94d3d8a486fe 66 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 60 5.6E-24 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03360 8b005c9b196ce9473cdf94d3d8a486fe 66 ProSitePatterns PS00579 Ribosomal protein L29 signature. 40 54 - T 15-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03360 8b005c9b196ce9473cdf94d3d8a486fe 66 SUPERFAMILY SSF46561 2 59 3.01E-18 T 15-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03360 8b005c9b196ce9473cdf94d3d8a486fe 66 Gene3D G3DSA:1.10.287.310 2 60 9.1E-23 T 15-10-2018 D934_03360 8b005c9b196ce9473cdf94d3d8a486fe 66 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 2 61 16.053 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_00400 ceebebb6c13c9f45b1ba62851f2817ff 452 Pfam PF06057 Bacterial virulence protein (VirJ) 263 450 3.9E-80 T 15-10-2018 IPR010333 Bacterial virulence D934_00400 ceebebb6c13c9f45b1ba62851f2817ff 452 Gene3D G3DSA:3.40.50.1820 234 450 2.4E-9 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_00400 ceebebb6c13c9f45b1ba62851f2817ff 452 SUPERFAMILY SSF53474 32 196 3.25E-6 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_00400 ceebebb6c13c9f45b1ba62851f2817ff 452 SUPERFAMILY SSF53474 259 448 3.89E-18 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_00400 ceebebb6c13c9f45b1ba62851f2817ff 452 PIRSF PIRSF029063 1 452 3.9E-178 T 15-10-2018 IPR011225 Type IV secretory pathway, VirJ component D934_07200 d240c2ebdcbc264f63b01b7e8afd9fa7 286 PIRSF PIRSF005261 1 286 1.8E-74 T 15-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 D934_07200 d240c2ebdcbc264f63b01b7e8afd9fa7 286 Gene3D G3DSA:3.90.1280.10 230 285 1.3E-19 T 15-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 D934_07200 d240c2ebdcbc264f63b01b7e8afd9fa7 286 Gene3D G3DSA:1.10.287.480 181 229 2.4E-9 T 15-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily D934_07200 d240c2ebdcbc264f63b01b7e8afd9fa7 286 Gene3D G3DSA:3.55.30.10 1 180 2.1E-41 T 15-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 D934_07200 d240c2ebdcbc264f63b01b7e8afd9fa7 286 Pfam PF01430 Hsp33 protein 5 277 4.3E-66 T 15-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 D934_07200 d240c2ebdcbc264f63b01b7e8afd9fa7 286 SUPERFAMILY SSF118352 230 285 1.12E-17 T 15-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 D934_07200 d240c2ebdcbc264f63b01b7e8afd9fa7 286 SUPERFAMILY SSF64397 4 236 1.31E-53 T 15-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 D934_08335 d294014f168c8ca9a1504cc93ff4fd7c 161 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 37 55 3.3E-4 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_08335 d294014f168c8ca9a1504cc93ff4fd7c 161 Gene3D G3DSA:3.30.700.10 36 160 3.9E-20 T 15-10-2018 D934_08335 d294014f168c8ca9a1504cc93ff4fd7c 161 PRINTS PR00813 Bacterial general secretion pathway protein G signature 34 59 4.4E-7 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 D934_08335 d294014f168c8ca9a1504cc93ff4fd7c 161 PRINTS PR00813 Bacterial general secretion pathway protein G signature 70 88 4.4E-7 T 15-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 D934_08335 d294014f168c8ca9a1504cc93ff4fd7c 161 SUPERFAMILY SSF54523 37 150 2.83E-22 T 15-10-2018 D934_08335 d294014f168c8ca9a1504cc93ff4fd7c 161 Pfam PF07963 Prokaryotic N-terminal methylation motif 37 55 9.0E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_08335 d294014f168c8ca9a1504cc93ff4fd7c 161 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 56 142 7.3E-24 T 15-10-2018 IPR031982 Type IV minor pilin ComP D934_04605 297a458a211533e7a90176eaaef4dca6 113 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 24 97 1.9E-15 T 15-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 D934_04605 297a458a211533e7a90176eaaef4dca6 113 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 19 112 7.7E-37 T 15-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 D934_10160 d8f367b0b703a3546f5741f1e80b0514 224 SUPERFAMILY SSF53041 42 138 9.42E-26 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 D934_10160 d8f367b0b703a3546f5741f1e80b0514 224 Gene3D G3DSA:3.40.50.1390 24 126 1.2E-25 T 15-10-2018 D934_10160 d8f367b0b703a3546f5741f1e80b0514 224 Pfam PF00239 Resolvase, N terminal domain 43 138 1.4E-27 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D934_10160 d8f367b0b703a3546f5741f1e80b0514 224 SMART SM00857 19 138 1.3E-17 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D934_10160 d8f367b0b703a3546f5741f1e80b0514 224 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 15-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 D934_06310 e2451352a8cf7ce76c0c7b7deaaf8555 109 Pfam PF16083 LydA holin phage, holin superfamily III 15 89 8.1E-20 T 15-10-2018 IPR032126 LydA-like holin D934_04495 e2451352a8cf7ce76c0c7b7deaaf8555 109 Pfam PF16083 LydA holin phage, holin superfamily III 15 89 8.1E-20 T 15-10-2018 IPR032126 LydA-like holin D934_05190 e2451352a8cf7ce76c0c7b7deaaf8555 109 Pfam PF16083 LydA holin phage, holin superfamily III 15 89 8.1E-20 T 15-10-2018 IPR032126 LydA-like holin D934_03560 cbaf595a7f27f41825f99c2281d28517 236 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 64 223 2.4E-39 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 D934_03560 cbaf595a7f27f41825f99c2281d28517 236 Gene3D G3DSA:3.30.70.580 61 226 1.5E-47 T 15-10-2018 D934_03560 cbaf595a7f27f41825f99c2281d28517 236 Gene3D G3DSA:3.30.70.1560 128 210 1.5E-47 T 15-10-2018 D934_03560 cbaf595a7f27f41825f99c2281d28517 236 SUPERFAMILY SSF55120 60 227 5.6E-38 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_03560 cbaf595a7f27f41825f99c2281d28517 236 Gene3D G3DSA:3.10.290.10 1 54 1.1E-7 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D934_03560 cbaf595a7f27f41825f99c2281d28517 236 Pfam PF00849 RNA pseudouridylate synthase 61 191 6.9E-13 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D934_03560 cbaf595a7f27f41825f99c2281d28517 236 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 D934_09920 f1d7772a962a2a814b98d354e3c54c6d 90 Gene3D G3DSA:1.10.10.60 3 89 5.8E-27 T 15-10-2018 D934_09920 f1d7772a962a2a814b98d354e3c54c6d 90 SUPERFAMILY SSF46689 4 89 5.73E-24 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D934_09920 f1d7772a962a2a814b98d354e3c54c6d 90 PRINTS PR01591 DNA-binding protein FIS signature 34 49 1.4E-8 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 D934_09920 f1d7772a962a2a814b98d354e3c54c6d 90 PRINTS PR01591 DNA-binding protein FIS signature 18 34 1.4E-8 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 D934_09920 f1d7772a962a2a814b98d354e3c54c6d 90 PRINTS PR01591 DNA-binding protein FIS signature 49 61 1.4E-8 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 D934_09920 f1d7772a962a2a814b98d354e3c54c6d 90 Pfam PF02954 Bacterial regulatory protein, Fis family 47 87 1.8E-15 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D934_09920 f1d7772a962a2a814b98d354e3c54c6d 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 53 70 1.2E-12 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D934_09920 f1d7772a962a2a814b98d354e3c54c6d 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 70 90 1.2E-12 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D934_09920 f1d7772a962a2a814b98d354e3c54c6d 90 PIRSF PIRSF002097 2 90 7.9E-34 T 15-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 D934_02470 f5d3b60cb6aef1c7c425bc44c2d27cb2 285 Pfam PF01551 Peptidase family M23 182 277 6.1E-29 T 15-10-2018 IPR016047 Peptidase M23 D934_02470 f5d3b60cb6aef1c7c425bc44c2d27cb2 285 Gene3D G3DSA:2.70.70.10 128 284 1.9E-45 T 15-10-2018 IPR011055 Duplicated hybrid motif D934_02470 f5d3b60cb6aef1c7c425bc44c2d27cb2 285 SUPERFAMILY SSF51261 40 281 1.2E-51 T 15-10-2018 IPR011055 Duplicated hybrid motif D934_11420 314846d6a66c6fbf403477a7fad6379b 560 Gene3D G3DSA:1.50.10.140 79 519 9.8E-158 T 15-10-2018 D934_11420 314846d6a66c6fbf403477a7fad6379b 560 PIRSF PIRSF028431 40 525 1.3E-194 T 15-10-2018 IPR016883 Uncharacterised conserved protein UCP028431 D934_11420 314846d6a66c6fbf403477a7fad6379b 560 Pfam PF10091 Putative glucoamylase 252 498 1.6E-85 T 15-10-2018 IPR019282 Domain of unknown function DUF2329 D934_11340 c17646ebab55100cabcc2bd33eab98d4 635 Gene3D G3DSA:3.40.50.720 282 617 4.8E-107 T 15-10-2018 D934_11340 c17646ebab55100cabcc2bd33eab98d4 635 Pfam PF13727 CoA-binding domain 68 242 5.7E-12 T 15-10-2018 D934_11340 c17646ebab55100cabcc2bd33eab98d4 635 SUPERFAMILY SSF53335 129 332 2.66E-12 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_11340 c17646ebab55100cabcc2bd33eab98d4 635 SUPERFAMILY SSF51735 285 553 3.17E-58 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_11340 c17646ebab55100cabcc2bd33eab98d4 635 Gene3D G3DSA:3.40.50.720 144 268 1.0E-29 T 15-10-2018 D934_11340 c17646ebab55100cabcc2bd33eab98d4 635 Pfam PF02719 Polysaccharide biosynthesis protein 287 570 4.7E-112 T 15-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain D934_13905 7eeedc68faaafd57bfce20c95d0742af 325 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 42 258 1.0E-35 T 15-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 D934_10130 5ea3e51d5048473e8fcfd61bc724e76e 802 SUPERFAMILY SSF52540 413 742 4.02E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_10130 5ea3e51d5048473e8fcfd61bc724e76e 802 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 168 379 5.9E-55 T 15-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 D934_11235 b640085b48f703b39075ec9f22f0c22c 321 Gene3D G3DSA:3.40.50.300 6 255 2.7E-7 T 15-10-2018 D934_11235 b640085b48f703b39075ec9f22f0c22c 321 SUPERFAMILY SSF52540 2 163 9.44E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_11235 b640085b48f703b39075ec9f22f0c22c 321 Pfam PF13166 AAA domain 24 165 1.7E-13 T 15-10-2018 IPR026866 Protein CR006, P-loop domain D934_02475 67e546106aa3e35b675010d5f9578b19 449 SUPERFAMILY SSF51338 1 440 1.2E-28 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D934_02475 67e546106aa3e35b675010d5f9578b19 449 Gene3D G3DSA:2.30.40.10 6 431 8.3E-132 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D934_02475 67e546106aa3e35b675010d5f9578b19 449 SUPERFAMILY SSF51556 55 377 6.81E-88 T 15-10-2018 IPR032466 Metal-dependent hydrolase D934_02475 67e546106aa3e35b675010d5f9578b19 449 Pfam PF01979 Amidohydrolase family 52 429 4.2E-16 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 D934_02475 67e546106aa3e35b675010d5f9578b19 449 ProSitePatterns PS00483 Dihydroorotase signature 2. 313 324 - T 15-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D934_02475 67e546106aa3e35b675010d5f9578b19 449 Gene3D G3DSA:3.20.20.140 56 416 8.3E-132 T 15-10-2018 D934_01250 076c89a3ea24e163fc8c903c1294464b 901 Gene3D G3DSA:3.10.20.410 99 221 2.0E-34 T 15-10-2018 D934_01250 076c89a3ea24e163fc8c903c1294464b 901 Gene3D G3DSA:2.60.40.2610 724 814 1.8E-28 T 15-10-2018 D934_01250 076c89a3ea24e163fc8c903c1294464b 901 Gene3D G3DSA:2.60.40.2070 815 901 4.9E-19 T 15-10-2018 D934_01250 076c89a3ea24e163fc8c903c1294464b 901 Pfam PF13954 PapC N-terminal domain 101 243 8.7E-47 T 15-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 D934_01250 076c89a3ea24e163fc8c903c1294464b 901 Gene3D G3DSA:2.60.40.3110 333 422 2.3E-39 T 15-10-2018 D934_01250 076c89a3ea24e163fc8c903c1294464b 901 Pfam PF13953 PapC C-terminal domain 819 883 2.0E-21 T 15-10-2018 IPR025949 PapC-like, C-terminal domain D934_01250 076c89a3ea24e163fc8c903c1294464b 901 Pfam PF00577 Outer membrane usher protein 263 809 2.3E-168 T 15-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 D934_01250 076c89a3ea24e163fc8c903c1294464b 901 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 375 385 - T 15-10-2018 IPR018030 Fimbrial membrane usher, conserved site D934_01250 076c89a3ea24e163fc8c903c1294464b 901 SUPERFAMILY SSF141729 122 235 3.53E-34 T 15-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 D934_01690 f18bf14a6e79a791c13090cb96670080 635 Pfam PF05960 Bacterial protein of unknown function (DUF885) 74 609 3.8E-161 T 15-10-2018 IPR010281 Protein of unknown function DUF885 D934_04555 2afa567b2f4e4afd568784b1ca946748 235 ProDom PD104351 DNA TRANSFER GP7 INJECTION AAF75053 GENE DIRECT ACCESSION PRECURSOR GENBANK 6 159 2.0E-63 T 15-10-2018 D934_07150 2afa567b2f4e4afd568784b1ca946748 235 ProDom PD104351 DNA TRANSFER GP7 INJECTION AAF75053 GENE DIRECT ACCESSION PRECURSOR GENBANK 6 159 2.0E-63 T 15-10-2018 D934_13180 0205ae43f5c5d1d13d1596b9e7e4347c 423 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 19 372 2.1E-124 T 15-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_13180 0205ae43f5c5d1d13d1596b9e7e4347c 423 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 17 381 37.58 T 15-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_13180 0205ae43f5c5d1d13d1596b9e7e4347c 423 Pfam PF01098 Cell cycle protein 23 373 1.2E-102 T 15-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_04645 96ab3860bf3cfecdad5a8cd1f6a7ff06 402 Gene3D G3DSA:1.20.1530.20 8 386 8.5E-33 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily D934_04645 96ab3860bf3cfecdad5a8cd1f6a7ff06 402 Pfam PF00999 Sodium/hydrogen exchanger family 14 375 3.7E-24 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 D934_06610 d606c80b74f4e68e656e2c691a46cb2d 109 Pfam PF16083 LydA holin phage, holin superfamily III 15 90 9.2E-19 T 15-10-2018 IPR032126 LydA-like holin D934_08500 d606c80b74f4e68e656e2c691a46cb2d 109 Pfam PF16083 LydA holin phage, holin superfamily III 15 90 9.2E-19 T 15-10-2018 IPR032126 LydA-like holin D934_07095 d606c80b74f4e68e656e2c691a46cb2d 109 Pfam PF16083 LydA holin phage, holin superfamily III 15 90 9.2E-19 T 15-10-2018 IPR032126 LydA-like holin D934_11470 5e4b16600a139ca3a8b073f4d17da3cc 247 Pfam PF01578 Cytochrome C assembly protein 10 187 2.5E-24 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 D934_11470 5e4b16600a139ca3a8b073f4d17da3cc 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 50 212 3.6E-58 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11470 5e4b16600a139ca3a8b073f4d17da3cc 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 48 65 2.1E-39 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11470 5e4b16600a139ca3a8b073f4d17da3cc 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 65 85 2.1E-39 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11470 5e4b16600a139ca3a8b073f4d17da3cc 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 124 144 2.1E-39 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11470 5e4b16600a139ca3a8b073f4d17da3cc 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 103 123 2.1E-39 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_11470 5e4b16600a139ca3a8b073f4d17da3cc 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 159 185 2.1E-39 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 D934_00745 c02a8d522151f40e8ba7ddb21597aad6 633 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 483 501 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site D934_00745 c02a8d522151f40e8ba7ddb21597aad6 633 Pfam PF06594 Haemolysin-type calcium binding protein related domain 555 593 4.5E-12 T 15-10-2018 IPR010566 Haemolysin-type calcium binding-related D934_00745 c02a8d522151f40e8ba7ddb21597aad6 633 SUPERFAMILY SSF51120 428 591 1.7E-31 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_00745 c02a8d522151f40e8ba7ddb21597aad6 633 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 492 510 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site D934_00745 c02a8d522151f40e8ba7ddb21597aad6 633 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 474 492 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site D934_00745 c02a8d522151f40e8ba7ddb21597aad6 633 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 448 464 0.16 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_00745 c02a8d522151f40e8ba7ddb21597aad6 633 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 470 484 0.13 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_00745 c02a8d522151f40e8ba7ddb21597aad6 633 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 496 511 0.0091 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_00745 c02a8d522151f40e8ba7ddb21597aad6 633 Gene3D G3DSA:2.150.10.10 448 609 1.7E-43 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_00745 c02a8d522151f40e8ba7ddb21597aad6 633 PRINTS PR00313 NodO calcium binding signature 496 504 4.8E-10 T 15-10-2018 D934_00745 c02a8d522151f40e8ba7ddb21597aad6 633 PRINTS PR00313 NodO calcium binding signature 505 514 4.8E-10 T 15-10-2018 D934_00745 c02a8d522151f40e8ba7ddb21597aad6 633 PRINTS PR00313 NodO calcium binding signature 487 495 4.8E-10 T 15-10-2018 D934_00745 c02a8d522151f40e8ba7ddb21597aad6 633 PRINTS PR00313 NodO calcium binding signature 475 486 4.8E-10 T 15-10-2018 D934_10890 eb6efa3d66c95f3663c3f27160f842b7 371 PRINTS PR01374 Gram-negative bacterial tonB protein signature 292 313 1.3E-9 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D934_10890 eb6efa3d66c95f3663c3f27160f842b7 371 PRINTS PR01374 Gram-negative bacterial tonB protein signature 332 349 1.3E-9 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D934_10890 eb6efa3d66c95f3663c3f27160f842b7 371 PRINTS PR01374 Gram-negative bacterial tonB protein signature 313 331 1.3E-9 T 15-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D934_10890 eb6efa3d66c95f3663c3f27160f842b7 371 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 296 361 4.8E-20 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 D934_10890 eb6efa3d66c95f3663c3f27160f842b7 371 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 298 369 2.3E-21 T 15-10-2018 IPR006260 TonB/TolA, C-terminal D934_10890 eb6efa3d66c95f3663c3f27160f842b7 371 SUPERFAMILY SSF74653 289 356 1.31E-20 T 15-10-2018 D934_10890 eb6efa3d66c95f3663c3f27160f842b7 371 Gene3D G3DSA:3.30.2420.10 291 368 2.2E-22 T 15-10-2018 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 Hamap MF_01961 Catalase-peroxidase [katG]. 12 757 41.914 T 15-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 55 68 4.6E-56 T 15-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 502 528 4.6E-56 T 15-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 70 95 4.6E-56 T 15-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 29 51 4.6E-56 T 15-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 289 312 4.6E-56 T 15-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 SUPERFAMILY SSF48113 23 450 3.4E-152 T 15-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 281 291 - T 15-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 Gene3D G3DSA:1.10.520.10 455 756 1.1E-145 T 15-10-2018 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 ProSitePatterns PS00436 Peroxidases active site signature. 93 104 - T 15-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 SUPERFAMILY SSF48113 452 756 1.77E-108 T 15-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 Gene3D G3DSA:1.10.420.10 609 732 1.1E-145 T 15-10-2018 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 16 757 0.0 T 15-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 PRINTS PR00458 Haem peroxidase superfamily signature 171 183 1.2E-13 T 15-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 PRINTS PR00458 Haem peroxidase superfamily signature 153 170 1.2E-13 T 15-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 PRINTS PR00458 Haem peroxidase superfamily signature 93 107 1.2E-13 T 15-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 PRINTS PR00458 Haem peroxidase superfamily signature 340 355 1.2E-13 T 15-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 Gene3D G3DSA:1.10.420.20 194 419 3.0E-225 T 15-10-2018 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 Pfam PF00141 Peroxidase 80 416 3.5E-49 T 15-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 Pfam PF00141 Peroxidase 424 730 6.1E-35 T 15-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 D934_05920 b8fb8e2db84d2705d3b08bc189f15efd 757 Gene3D G3DSA:1.10.520.10 23 452 3.0E-225 T 15-10-2018 D934_11850 51c3e08875b43bb5c38a0b514572b610 462 SUPERFAMILY SSF53335 24 192 5.15E-17 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_11850 51c3e08875b43bb5c38a0b514572b610 462 Gene3D G3DSA:3.40.50.150 17 186 2.2E-15 T 15-10-2018 D934_11850 51c3e08875b43bb5c38a0b514572b610 462 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 28 154 3.5E-17 T 15-10-2018 IPR006342 Methyltransferase FkbM D934_11850 51c3e08875b43bb5c38a0b514572b610 462 Pfam PF05050 Methyltransferase FkbM domain 30 180 1.2E-17 T 15-10-2018 IPR006342 Methyltransferase FkbM D934_13575 265b38fec8cec2400f7d09cdc119490c 1167 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1150 4.9E-67 T 15-10-2018 IPR003395 RecF/RecN/SMC, N-terminal D934_13575 265b38fec8cec2400f7d09cdc119490c 1167 SUPERFAMILY SSF75553 488 667 1.18E-6 T 15-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 D934_13575 265b38fec8cec2400f7d09cdc119490c 1167 SMART SM00968 521 619 1.6E-7 T 15-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 D934_13575 265b38fec8cec2400f7d09cdc119490c 1167 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1159 22.435 T 15-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 D934_13575 265b38fec8cec2400f7d09cdc119490c 1167 SUPERFAMILY SSF52540 1 1159 1.25E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_13575 265b38fec8cec2400f7d09cdc119490c 1167 Pfam PF06470 SMC proteins Flexible Hinge Domain 526 606 5.6E-6 T 15-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 D934_13575 265b38fec8cec2400f7d09cdc119490c 1167 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1157 0.0 T 15-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 D934_13575 265b38fec8cec2400f7d09cdc119490c 1167 Gene3D G3DSA:3.40.50.300 1 238 6.3E-53 T 15-10-2018 D934_13575 265b38fec8cec2400f7d09cdc119490c 1167 PIRSF PIRSF005719 1 1163 1.0E-264 T 15-10-2018 IPR024704 Structural maintenance of chromosomes protein D934_13575 265b38fec8cec2400f7d09cdc119490c 1167 Gene3D G3DSA:3.40.50.300 1005 1167 1.8E-45 T 15-10-2018 D934_11620 7ec38722ceae266fb0612d191d178c21 561 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 371 389 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site D934_11620 7ec38722ceae266fb0612d191d178c21 561 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 353 371 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site D934_11620 7ec38722ceae266fb0612d191d178c21 561 SUPERFAMILY SSF51120 330 521 1.88E-32 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_11620 7ec38722ceae266fb0612d191d178c21 561 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 380 398 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site D934_11620 7ec38722ceae266fb0612d191d178c21 561 Pfam PF06594 Haemolysin-type calcium binding protein related domain 486 524 8.6E-11 T 15-10-2018 IPR010566 Haemolysin-type calcium binding-related D934_11620 7ec38722ceae266fb0612d191d178c21 561 PRINTS PR00313 NodO calcium binding signature 393 401 4.3E-11 T 15-10-2018 D934_11620 7ec38722ceae266fb0612d191d178c21 561 PRINTS PR00313 NodO calcium binding signature 411 419 4.3E-11 T 15-10-2018 D934_11620 7ec38722ceae266fb0612d191d178c21 561 PRINTS PR00313 NodO calcium binding signature 363 374 4.3E-11 T 15-10-2018 D934_11620 7ec38722ceae266fb0612d191d178c21 561 PRINTS PR00313 NodO calcium binding signature 431 440 4.3E-11 T 15-10-2018 D934_11620 7ec38722ceae266fb0612d191d178c21 561 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 402 418 0.073 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_11620 7ec38722ceae266fb0612d191d178c21 561 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 348 364 0.003 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_11620 7ec38722ceae266fb0612d191d178c21 561 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 452 467 31.0 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_11620 7ec38722ceae266fb0612d191d178c21 561 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 383 400 0.05 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_11620 7ec38722ceae266fb0612d191d178c21 561 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 365 382 2.1E-4 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_11620 7ec38722ceae266fb0612d191d178c21 561 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 330 346 14.0 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_11620 7ec38722ceae266fb0612d191d178c21 561 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 430 446 0.35 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_11620 7ec38722ceae266fb0612d191d178c21 561 Gene3D G3DSA:2.150.10.10 330 390 7.9E-19 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_11620 7ec38722ceae266fb0612d191d178c21 561 Gene3D G3DSA:2.150.10.10 391 538 1.3E-37 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_13760 9fc13063a2c3b274b786739625ead243 109 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 18 109 1.8E-26 T 15-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin D934_13760 9fc13063a2c3b274b786739625ead243 109 Gene3D G3DSA:3.30.2310.20 4 109 5.2E-28 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D934_13760 9fc13063a2c3b274b786739625ead243 109 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 19 108 9.7E-23 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family D934_13760 9fc13063a2c3b274b786739625ead243 109 SUPERFAMILY SSF143011 19 108 4.84E-22 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D934_13760 9fc13063a2c3b274b786739625ead243 109 PIRSF PIRSF006156 17 109 2.0E-16 T 15-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin D934_00180 09f20ac99a74b46b701519e741635b6b 151 Gene3D G3DSA:2.40.50.140 26 151 6.4E-61 T 15-10-2018 D934_00180 09f20ac99a74b46b701519e741635b6b 151 ProSitePatterns PS00055 Ribosomal protein S12 signature. 70 77 - T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_00180 09f20ac99a74b46b701519e741635b6b 151 PIRSF PIRSF002133 28 151 2.7E-53 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_00180 09f20ac99a74b46b701519e741635b6b 151 SUPERFAMILY SSF50249 30 150 4.45E-49 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_00180 09f20ac99a74b46b701519e741635b6b 151 PRINTS PR01034 Ribosomal protein S12 signature 85 104 3.9E-58 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_00180 09f20ac99a74b46b701519e741635b6b 151 PRINTS PR01034 Ribosomal protein S12 signature 137 149 3.9E-58 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_00180 09f20ac99a74b46b701519e741635b6b 151 PRINTS PR01034 Ribosomal protein S12 signature 104 121 3.9E-58 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_00180 09f20ac99a74b46b701519e741635b6b 151 PRINTS PR01034 Ribosomal protein S12 signature 54 69 3.9E-58 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_00180 09f20ac99a74b46b701519e741635b6b 151 PRINTS PR01034 Ribosomal protein S12 signature 69 84 3.9E-58 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_00180 09f20ac99a74b46b701519e741635b6b 151 PRINTS PR01034 Ribosomal protein S12 signature 121 137 3.9E-58 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_00180 09f20ac99a74b46b701519e741635b6b 151 Pfam PF00164 Ribosomal protein S12/S23 40 150 8.1E-40 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_00180 09f20ac99a74b46b701519e741635b6b 151 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 28 150 1.8E-67 T 15-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_00180 09f20ac99a74b46b701519e741635b6b 151 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 28 150 38.345 T 15-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13485 eaf49317347cd9aeb8f133583df0bf09 150 Gene3D G3DSA:3.30.700.10 7 142 5.7E-28 T 15-10-2018 D934_13485 eaf49317347cd9aeb8f133583df0bf09 150 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.3E-10 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_13485 eaf49317347cd9aeb8f133583df0bf09 150 Pfam PF00114 Pilin (bacterial filament) 35 141 2.4E-23 T 15-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 D934_13485 eaf49317347cd9aeb8f133583df0bf09 150 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 5.5E-12 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_13485 eaf49317347cd9aeb8f133583df0bf09 150 SUPERFAMILY SSF54523 7 142 2.2E-27 T 15-10-2018 D934_13485 eaf49317347cd9aeb8f133583df0bf09 150 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_01165 7dbd21c27f4ed42c382e4ec7348c0590 346 Gene3D G3DSA:3.40.1090.10 35 150 1.8E-22 T 15-10-2018 D934_01165 7dbd21c27f4ed42c382e4ec7348c0590 346 Gene3D G3DSA:3.40.1090.20 165 245 4.7E-7 T 15-10-2018 D934_01165 7dbd21c27f4ed42c382e4ec7348c0590 346 Pfam PF01734 Patatin-like phospholipase 50 206 9.6E-27 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 D934_01165 7dbd21c27f4ed42c382e4ec7348c0590 346 SUPERFAMILY SSF52151 45 296 1.02E-59 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D934_13120 efeb95d87c1793cac87200431ca73bfa 282 Gene3D G3DSA:3.40.50.150 121 276 1.8E-14 T 15-10-2018 D934_13120 efeb95d87c1793cac87200431ca73bfa 282 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 181 244 2.9E-4 T 15-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 D934_13120 efeb95d87c1793cac87200431ca73bfa 282 SUPERFAMILY SSF53335 69 269 1.13E-23 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_06970 16d4cca3033af8cc273248790626b751 339 Gene3D G3DSA:1.10.443.10 169 335 3.0E-29 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D934_06970 16d4cca3033af8cc273248790626b751 339 Pfam PF00589 Phage integrase family 175 330 2.6E-15 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D934_06970 16d4cca3033af8cc273248790626b751 339 SUPERFAMILY SSF56349 65 329 2.83E-47 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D934_06970 16d4cca3033af8cc273248790626b751 339 Gene3D G3DSA:1.10.150.130 64 168 4.0E-5 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal D934_07480 2bf029d995c3714401266beec2b001ac 215 Pfam PF02036 SCP-2 sterol transfer family 22 123 4.8E-15 T 15-10-2018 IPR003033 SCP2 sterol-binding domain D934_08750 5dbf941c2ef836396b7d15029e5a3248 426 Gene3D G3DSA:3.40.50.1820 36 255 2.0E-57 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_08750 5dbf941c2ef836396b7d15029e5a3248 426 Gene3D G3DSA:3.40.50.1820 342 426 2.9E-18 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_08750 5dbf941c2ef836396b7d15029e5a3248 426 SUPERFAMILY SSF53474 89 373 8.31E-19 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_08750 5dbf941c2ef836396b7d15029e5a3248 426 Pfam PF03583 Secretory lipase 135 212 9.7E-6 T 15-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 D934_08750 5dbf941c2ef836396b7d15029e5a3248 426 PIRSF PIRSF029171 4 425 1.2E-82 T 15-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 D934_02530 2f336d2b8f07af6fe1577555f67affc5 364 SUPERFAMILY SSF55031 165 265 3.66E-12 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain D934_02530 2f336d2b8f07af6fe1577555f67affc5 364 Pfam PF01546 Peptidase family M20/M25/M40 67 362 2.7E-20 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 D934_02530 2f336d2b8f07af6fe1577555f67affc5 364 Pfam PF07687 Peptidase dimerisation domain 163 265 2.3E-14 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain D934_02530 2f336d2b8f07af6fe1577555f67affc5 364 Gene3D G3DSA:3.40.630.10 15 350 1.9E-106 T 15-10-2018 D934_02530 2f336d2b8f07af6fe1577555f67affc5 364 SUPERFAMILY SSF53187 3 362 9.28E-35 T 15-10-2018 D934_02530 2f336d2b8f07af6fe1577555f67affc5 364 Gene3D G3DSA:3.30.70.360 166 279 1.9E-106 T 15-10-2018 D934_01790 475cc47bd367bad588a84badedef9069 118 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 94 2.8E-32 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 D934_01790 475cc47bd367bad588a84badedef9069 118 Gene3D G3DSA:3.30.479.10 1 118 1.5E-45 T 15-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 D934_01790 475cc47bd367bad588a84badedef9069 118 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 117 5.6E-34 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 D934_01790 475cc47bd367bad588a84badedef9069 118 PIRSF PIRSF006113 1 118 1.6E-48 T 15-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 D934_01790 475cc47bd367bad588a84badedef9069 118 SUPERFAMILY SSF55620 3 117 2.95E-39 T 15-10-2018 D934_11355 b5136c6b4e74884f2d9ec3ed42d661ef 98 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 80 3.2E-8 T 15-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 SUPERFAMILY SSF50249 130 187 9.25E-14 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 8.5E-19 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 15-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 Gene3D G3DSA:2.40.50.140 66 128 6.8E-14 T 15-10-2018 D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 2 61 3.9E-11 T 15-10-2018 IPR013185 Translation elongation factor, KOW-like D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 Gene3D G3DSA:2.40.50.140 130 187 2.9E-19 T 15-10-2018 D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 SUPERFAMILY SSF50249 68 128 1.41E-9 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 9.1E-13 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 PIRSF PIRSF005901 1 188 7.5E-62 T 15-10-2018 IPR020599 Translation elongation factor P/YeiP D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 1 187 36.344 T 15-10-2018 IPR011897 Translation elongation factor P-like, YeiP D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 SUPERFAMILY SSF50104 2 62 1.2E-8 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 2 187 1.2E-97 T 15-10-2018 IPR011897 Translation elongation factor P-like, YeiP D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 Gene3D G3DSA:2.30.30.30 1 62 1.8E-7 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 SMART SM01185 68 123 9.7E-14 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 D934_05785 bbba3c48fd5e5a36425f71b3b7931ed7 188 SMART SM00841 131 186 1.0E-20 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 D934_01845 37cb8cc289e1e5eb2f9b4fb9e72e7f23 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D934_01845 37cb8cc289e1e5eb2f9b4fb9e72e7f23 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 9.3E-87 T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D934_01845 37cb8cc289e1e5eb2f9b4fb9e72e7f23 223 PIRSF PIRSF001461 1 223 5.8E-100 T 15-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D934_01845 37cb8cc289e1e5eb2f9b4fb9e72e7f23 223 Gene3D G3DSA:3.20.20.70 4 222 1.1E-80 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_01845 37cb8cc289e1e5eb2f9b4fb9e72e7f23 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 2.3E-95 T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D934_01845 37cb8cc289e1e5eb2f9b4fb9e72e7f23 223 SUPERFAMILY SSF51366 4 217 1.14E-72 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D934_01845 37cb8cc289e1e5eb2f9b4fb9e72e7f23 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D934_10290 702c37cb9441f28baeddf2d6a7d6c6b1 96 Pfam PF13986 Domain of unknown function (DUF4224) 33 77 3.6E-17 T 15-10-2018 IPR025319 Domain of unknown function DUF4224 D934_10435 6cdeb081e06233dcd160cfa36948f0a4 255 ProDom PD046566 PATHWAY N GENERAL SECRETION PRECURSOR SIGNAL MEMBRANE XPSN TRANSMEMBRANE INNER 1 230 5.0E-124 T 15-10-2018 D934_08185 e5dbd3e74cc3cfc3706d9aa81a86bc72 256 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 24 192 1.8E-31 T 15-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 D934_08185 e5dbd3e74cc3cfc3706d9aa81a86bc72 256 Gene3D G3DSA:1.20.120.1760 4 196 4.3E-13 T 15-10-2018 D934_08185 e5dbd3e74cc3cfc3706d9aa81a86bc72 256 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 D934_08185 e5dbd3e74cc3cfc3706d9aa81a86bc72 256 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 79 5.2E-14 T 15-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 D934_10960 cfaee8ce79a6a64a3ab2a64e0f2d1882 557 Gene3D G3DSA:3.40.50.300 1 255 2.3E-46 T 15-10-2018 D934_10960 cfaee8ce79a6a64a3ab2a64e0f2d1882 557 Gene3D G3DSA:3.40.50.300 256 553 9.2E-48 T 15-10-2018 D934_10960 cfaee8ce79a6a64a3ab2a64e0f2d1882 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 507 1.1E-21 T 15-10-2018 IPR003395 RecF/RecN/SMC, N-terminal D934_10960 cfaee8ce79a6a64a3ab2a64e0f2d1882 557 SUPERFAMILY SSF52540 1 507 6.8E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_10960 cfaee8ce79a6a64a3ab2a64e0f2d1882 557 PIRSF PIRSF003128 1 557 2.7E-147 T 15-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 D934_10960 cfaee8ce79a6a64a3ab2a64e0f2d1882 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 8.3E-146 T 15-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 D934_11885 5c50b1897e56b6573f57146b5848b646 216 Pfam PF16357 Putative PepSY_TM-like 21 216 8.7E-82 T 15-10-2018 IPR032307 Putative PepSY TM-like protein D934_03370 41a96a7418e2be0d71a38ec6e12a3e39 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 6.5E-55 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 D934_03370 41a96a7418e2be0d71a38ec6e12a3e39 122 SUPERFAMILY SSF50193 1 122 1.26E-51 T 15-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 D934_03370 41a96a7418e2be0d71a38ec6e12a3e39 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 15-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03370 41a96a7418e2be0d71a38ec6e12a3e39 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.6E-57 T 15-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 D934_03370 41a96a7418e2be0d71a38ec6e12a3e39 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.53 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 D934_03370 41a96a7418e2be0d71a38ec6e12a3e39 122 SMART SM01374 1 122 1.9E-84 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 D934_03370 41a96a7418e2be0d71a38ec6e12a3e39 122 Gene3D G3DSA:2.40.150.20 1 122 9.7E-55 T 15-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 D934_05590 c92ef1f369dac67f4b67f35944938310 211 Gene3D G3DSA:3.40.30.10 11 200 1.3E-66 T 15-10-2018 D934_05590 c92ef1f369dac67f4b67f35944938310 211 SUPERFAMILY SSF47616 82 206 8.1E-23 T 15-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D934_05590 c92ef1f369dac67f4b67f35944938310 211 Gene3D G3DSA:1.20.1050.10 89 192 1.3E-66 T 15-10-2018 D934_05590 c92ef1f369dac67f4b67f35944938310 211 SUPERFAMILY SSF52833 11 111 8.27E-20 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_05590 c92ef1f369dac67f4b67f35944938310 211 Pfam PF02798 Glutathione S-transferase, N-terminal domain 11 81 1.3E-11 T 15-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D934_05590 c92ef1f369dac67f4b67f35944938310 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 104 193 3.1E-7 T 15-10-2018 IPR004046 Glutathione S-transferase, C-terminal D934_03065 dbb7ef9ea9015c62d1a3f7c6281d2611 394 SUPERFAMILY SSF51690 120 390 2.94E-85 T 15-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 D934_03065 dbb7ef9ea9015c62d1a3f7c6281d2611 394 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 4 389 4.7E-134 T 15-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 D934_03065 dbb7ef9ea9015c62d1a3f7c6281d2611 394 Gene3D G3DSA:3.20.140.10 1 394 4.7E-147 T 15-10-2018 D934_03065 dbb7ef9ea9015c62d1a3f7c6281d2611 394 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 165 391 6.1E-79 T 15-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 D934_03065 dbb7ef9ea9015c62d1a3f7c6281d2611 394 PIRSF PIRSF000484 1 385 3.8E-67 T 15-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 D934_03065 dbb7ef9ea9015c62d1a3f7c6281d2611 394 SUPERFAMILY SSF54675 2 137 1.37E-43 T 15-10-2018 D934_03065 dbb7ef9ea9015c62d1a3f7c6281d2611 394 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 392 50.054 T 15-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 D934_13190 1b17ab184e7e4620a915261b66d8a3a9 468 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 398 2.3E-8 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 D934_13190 1b17ab184e7e4620a915261b66d8a3a9 468 Gene3D G3DSA:3.40.1190.10 82 316 4.1E-65 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D934_13190 1b17ab184e7e4620a915261b66d8a3a9 468 Pfam PF08245 Mur ligase middle domain 107 300 4.3E-41 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D934_13190 1b17ab184e7e4620a915261b66d8a3a9 468 Pfam PF01225 Mur ligase family, catalytic domain 26 94 1.5E-4 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 D934_13190 1b17ab184e7e4620a915261b66d8a3a9 468 SUPERFAMILY SSF63418 1 95 1.83E-20 T 15-10-2018 IPR035911 MurE/MurF, N-terminal D934_13190 1b17ab184e7e4620a915261b66d8a3a9 468 SUPERFAMILY SSF53244 320 457 1.19E-29 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D934_13190 1b17ab184e7e4620a915261b66d8a3a9 468 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 457 2.2E-135 T 15-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13190 1b17ab184e7e4620a915261b66d8a3a9 468 Gene3D G3DSA:3.40.1390.10 1 81 2.6E-20 T 15-10-2018 D934_13190 1b17ab184e7e4620a915261b66d8a3a9 468 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 458 30.504 T 15-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D934_13190 1b17ab184e7e4620a915261b66d8a3a9 468 Gene3D G3DSA:3.90.190.20 319 461 1.4E-32 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D934_13190 1b17ab184e7e4620a915261b66d8a3a9 468 SUPERFAMILY SSF53623 103 314 1.57E-50 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D934_07460 7090ccbc9754b2f54f8dcfa7b0557cc6 390 SUPERFAMILY SSF52540 59 200 7.98E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_07460 7090ccbc9754b2f54f8dcfa7b0557cc6 390 Gene3D G3DSA:3.40.50.300 24 206 5.6E-14 T 15-10-2018 D934_07460 7090ccbc9754b2f54f8dcfa7b0557cc6 390 Pfam PF03969 AFG1-like ATPase 115 385 2.9E-90 T 15-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 D934_07460 7090ccbc9754b2f54f8dcfa7b0557cc6 390 Pfam PF03969 AFG1-like ATPase 4 89 1.0E-17 T 15-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 D934_02955 a764a706043476ae80e3334b4c7bfeaf 93 Gene3D G3DSA:3.30.2310.20 1 93 6.6E-32 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D934_02955 a764a706043476ae80e3334b4c7bfeaf 93 PIRSF PIRSF006156 1 92 2.8E-25 T 15-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin D934_02955 a764a706043476ae80e3334b4c7bfeaf 93 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 3 91 7.2E-32 T 15-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin D934_02955 a764a706043476ae80e3334b4c7bfeaf 93 SUPERFAMILY SSF143011 1 91 1.14E-24 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D934_02955 a764a706043476ae80e3334b4c7bfeaf 93 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 91 2.1E-25 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family D934_10990 e5bcb58b71a9a53bf13ecba925de1548 731 SUPERFAMILY SSF103515 488 731 6.8E-27 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily D934_10990 e5bcb58b71a9a53bf13ecba925de1548 731 SMART SM00869 471 720 2.3E-6 T 15-10-2018 IPR005546 Autotransporter beta-domain D934_10990 e5bcb58b71a9a53bf13ecba925de1548 731 Pfam PF03797 Autotransporter beta-domain 524 709 4.8E-10 T 15-10-2018 IPR005546 Autotransporter beta-domain D934_10990 e5bcb58b71a9a53bf13ecba925de1548 731 Gene3D G3DSA:2.40.128.130 461 731 8.5E-15 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily D934_12080 9cfc0d1a56a91df80ea110a4b6fae1a4 576 Gene3D G3DSA:3.40.50.2300 253 561 1.6E-68 T 15-10-2018 D934_12080 9cfc0d1a56a91df80ea110a4b6fae1a4 576 Gene3D G3DSA:3.40.50.2300 358 562 1.6E-68 T 15-10-2018 D934_12080 9cfc0d1a56a91df80ea110a4b6fae1a4 576 Pfam PF04348 LppC putative lipoprotein 42 568 9.2E-172 T 15-10-2018 IPR007443 Penicillin-binding protein activator LpoA D934_12080 9cfc0d1a56a91df80ea110a4b6fae1a4 576 SUPERFAMILY SSF53822 250 573 1.83E-60 T 15-10-2018 IPR028082 Periplasmic binding protein-like I D934_01685 1c6afa86acf9b17d3486b5c22e1e66b2 282 Pfam PF01578 Cytochrome C assembly protein 35 260 3.8E-36 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 D934_01220 1c6afa86acf9b17d3486b5c22e1e66b2 282 Pfam PF01578 Cytochrome C assembly protein 35 260 3.8E-36 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 D934_00020 47d4f4e7be2f67e0ec54e2dd4af4b335 508 SUPERFAMILY SSF53067 17 137 1.88E-31 T 15-10-2018 D934_00020 47d4f4e7be2f67e0ec54e2dd4af4b335 508 Gene3D G3DSA:3.30.420.40 18 309 2.1E-83 T 15-10-2018 D934_00020 47d4f4e7be2f67e0ec54e2dd4af4b335 508 SUPERFAMILY SSF53067 142 314 2.04E-44 T 15-10-2018 D934_00020 47d4f4e7be2f67e0ec54e2dd4af4b335 508 Gene3D G3DSA:1.10.3210.10 317 507 1.3E-50 T 15-10-2018 D934_00020 47d4f4e7be2f67e0ec54e2dd4af4b335 508 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 17 312 7.3E-97 T 15-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 D934_00020 47d4f4e7be2f67e0ec54e2dd4af4b335 508 Gene3D G3DSA:3.30.420.150 121 301 2.1E-83 T 15-10-2018 D934_00020 47d4f4e7be2f67e0ec54e2dd4af4b335 508 SUPERFAMILY SSF109604 319 498 4.89E-46 T 15-10-2018 D934_00020 47d4f4e7be2f67e0ec54e2dd4af4b335 508 Pfam PF02541 Ppx/GppA phosphatase family 31 314 2.2E-64 T 15-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 D934_00020 47d4f4e7be2f67e0ec54e2dd4af4b335 508 PIRSF PIRSF001267 7 508 3.7E-186 T 15-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 D934_07920 c17a050e45b35a2adf0293a1068903a1 332 Gene3D G3DSA:3.20.20.70 15 253 1.1E-67 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_07920 c17a050e45b35a2adf0293a1068903a1 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 99 117 - T 15-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 D934_07920 c17a050e45b35a2adf0293a1068903a1 332 Gene3D G3DSA:1.20.120.1460 262 332 2.8E-17 T 15-10-2018 D934_07920 c17a050e45b35a2adf0293a1068903a1 332 Pfam PF01207 Dihydrouridine synthase (Dus) 20 323 5.0E-72 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 D934_07920 c17a050e45b35a2adf0293a1068903a1 332 PIRSF PIRSF006621 5 332 5.0E-76 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 D934_07920 c17a050e45b35a2adf0293a1068903a1 332 SUPERFAMILY SSF51395 17 311 2.09E-64 T 15-10-2018 D934_07920 c17a050e45b35a2adf0293a1068903a1 332 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 12 332 47.282 T 15-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 D934_01705 f5f2f5612f8fb1d9f85b3fee8e5e8172 214 Pfam PF03006 Haemolysin-III related 13 206 2.6E-36 T 15-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 D934_01705 f5f2f5612f8fb1d9f85b3fee8e5e8172 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 211 4.3E-61 T 15-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 D934_07575 797f0b6f189e7dc027bf742af2aff43f 118 Gene3D G3DSA:1.10.460.10 47 75 4.2E-11 T 15-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 D934_07575 797f0b6f189e7dc027bf742af2aff43f 118 SUPERFAMILY SSF56712 16 77 3.4E-10 T 15-10-2018 IPR023405 DNA topoisomerase, type IA, core domain D934_07575 797f0b6f189e7dc027bf742af2aff43f 118 Gene3D G3DSA:2.70.20.10 16 46 4.2E-11 T 15-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 D934_00315 0d7819c8ff0c4ef55333579e01b00c28 175 SUPERFAMILY SSF53474 4 172 1.62E-21 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_00315 0d7819c8ff0c4ef55333579e01b00c28 175 Pfam PF05728 Uncharacterised protein family (UPF0227) 10 98 1.2E-4 T 15-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA D934_00315 0d7819c8ff0c4ef55333579e01b00c28 175 Gene3D G3DSA:3.40.50.1820 1 175 2.8E-42 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_02805 235c2d582c7de699d66a6c42255915e6 337 Gene3D G3DSA:3.40.367.20 107 311 1.1E-94 T 15-10-2018 D934_02805 235c2d582c7de699d66a6c42255915e6 337 Pfam PF02685 Glucokinase 9 327 5.6E-111 T 15-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 D934_02805 235c2d582c7de699d66a6c42255915e6 337 SUPERFAMILY SSF53067 8 327 1.3E-57 T 15-10-2018 D934_02805 235c2d582c7de699d66a6c42255915e6 337 Hamap MF_00524 Glucokinase [glk]. 7 328 32.516 T 15-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 D934_02805 235c2d582c7de699d66a6c42255915e6 337 TIGRFAM TIGR00749 glk: glucokinase 9 322 5.6E-81 T 15-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 D934_02805 235c2d582c7de699d66a6c42255915e6 337 Gene3D G3DSA:3.30.420.40 8 322 1.1E-94 T 15-10-2018 D934_12635 604f71eb13a2e458e61bfb457511df82 222 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 216 7.0E-57 T 15-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 D934_12635 604f71eb13a2e458e61bfb457511df82 222 Pfam PF01467 Cytidylyltransferase-like 7 191 3.3E-35 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D934_12635 604f71eb13a2e458e61bfb457511df82 222 Gene3D G3DSA:3.40.50.620 5 221 8.6E-54 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_12635 604f71eb13a2e458e61bfb457511df82 222 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 63 4.0E-9 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D934_12635 604f71eb13a2e458e61bfb457511df82 222 SUPERFAMILY SSF52374 4 217 3.94E-44 T 15-10-2018 D934_12635 604f71eb13a2e458e61bfb457511df82 222 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 217 25.512 T 15-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 D934_11295 070265e89463f03ce64f532e54020689 108 TIGRFAM TIGR00061 L21: ribosomal protein bL21 4 102 1.1E-32 T 15-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_11295 070265e89463f03ce64f532e54020689 108 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 3 104 24.365 T 15-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_11295 070265e89463f03ce64f532e54020689 108 Pfam PF00829 Ribosomal prokaryotic L21 protein 3 102 4.2E-35 T 15-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_11295 070265e89463f03ce64f532e54020689 108 SUPERFAMILY SSF141091 3 102 1.44E-32 T 15-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_11295 070265e89463f03ce64f532e54020689 108 ProSitePatterns PS01169 Ribosomal protein L21 signature. 73 95 - T 15-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_06295 44fb4f8e1eb8ca40e94d102009752e2f 843 SUPERFAMILY SSF52540 525 689 2.39E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_06295 44fb4f8e1eb8ca40e94d102009752e2f 843 SMART SM00885 372 531 2.9E-47 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D934_06295 44fb4f8e1eb8ca40e94d102009752e2f 843 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 480 802 1.4E-79 T 15-10-2018 IPR006500 DNA primase, phage/plasmid D934_06295 44fb4f8e1eb8ca40e94d102009752e2f 843 Pfam PF08706 D5 N terminal like 373 530 2.8E-34 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D934_06295 44fb4f8e1eb8ca40e94d102009752e2f 843 Pfam PF03288 Poxvirus D5 protein-like 751 820 1.7E-5 T 15-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal D934_01460 0fb0eefd59f9688f2115cb240f324d45 403 SUPERFAMILY SSF53686 21 375 1.44E-66 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D934_01460 0fb0eefd59f9688f2115cb240f324d45 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 70 356 9.2E-45 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D934_01460 0fb0eefd59f9688f2115cb240f324d45 403 Gene3D G3DSA:3.40.50.1100 71 362 4.4E-65 T 15-10-2018 D934_01460 0fb0eefd59f9688f2115cb240f324d45 403 Gene3D G3DSA:3.40.50.1100 85 191 4.4E-65 T 15-10-2018 D934_02435 91f2a7a29629dc2b62a792c90ef01f6c 208 SUPERFAMILY SSF53335 17 192 1.61E-45 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_02435 91f2a7a29629dc2b62a792c90ef01f6c 208 PIRSF PIRSF004553 16 194 3.4E-43 T 15-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 D934_02435 91f2a7a29629dc2b62a792c90ef01f6c 208 Pfam PF03602 Conserved hypothetical protein 95 17 192 1.4E-54 T 15-10-2018 D934_02435 91f2a7a29629dc2b62a792c90ef01f6c 208 Gene3D G3DSA:3.40.50.150 12 195 1.2E-54 T 15-10-2018 D934_02435 91f2a7a29629dc2b62a792c90ef01f6c 208 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 14 192 4.9E-42 T 15-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 D934_02435 91f2a7a29629dc2b62a792c90ef01f6c 208 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D934_01905 05017961df7fc6b5578422a91676579c 120 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 31 111 3.4E-24 T 15-10-2018 IPR003849 Preprotein translocase YajC D934_01905 05017961df7fc6b5578422a91676579c 120 PRINTS PR01853 Bacterial YajC preprotein translocase signature 69 87 3.9E-12 T 15-10-2018 IPR003849 Preprotein translocase YajC D934_01905 05017961df7fc6b5578422a91676579c 120 PRINTS PR01853 Bacterial YajC preprotein translocase signature 31 51 3.9E-12 T 15-10-2018 IPR003849 Preprotein translocase YajC D934_01905 05017961df7fc6b5578422a91676579c 120 SMART SM01323 29 111 6.7E-39 T 15-10-2018 IPR003849 Preprotein translocase YajC D934_01905 05017961df7fc6b5578422a91676579c 120 Pfam PF02699 Preprotein translocase subunit 33 109 3.9E-26 T 15-10-2018 IPR003849 Preprotein translocase YajC D934_13025 a6c18240626cad6297f2f460130418c2 792 Pfam PF03968 OstA-like protein 62 191 2.0E-4 T 15-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal D934_13025 a6c18240626cad6297f2f460130418c2 792 SUPERFAMILY SSF56935 525 703 9.16E-5 T 15-10-2018 D934_13025 a6c18240626cad6297f2f460130418c2 792 Pfam PF04453 Organic solvent tolerance protein 296 689 3.4E-95 T 15-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 D934_13025 a6c18240626cad6297f2f460130418c2 792 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 7 750 19.183 T 15-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 D934_09785 d8c9d5baa1315045987ff03e0748a095 301 Pfam PF00561 alpha/beta hydrolase fold 33 285 2.9E-24 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D934_09785 d8c9d5baa1315045987ff03e0748a095 301 PRINTS PR00412 Epoxide hydrolase signature 38 56 2.5E-6 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D934_09785 d8c9d5baa1315045987ff03e0748a095 301 PRINTS PR00412 Epoxide hydrolase signature 274 296 2.5E-6 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D934_09785 d8c9d5baa1315045987ff03e0748a095 301 PRINTS PR00412 Epoxide hydrolase signature 112 125 2.5E-6 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D934_09785 d8c9d5baa1315045987ff03e0748a095 301 SUPERFAMILY SSF53474 5 299 3.53E-55 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_09785 d8c9d5baa1315045987ff03e0748a095 301 Gene3D G3DSA:3.40.50.1820 13 299 3.3E-63 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_09080 8cd70303b2aa4f2fed66cd83f7309189 941 SMART SM00327 152 338 0.0098 T 15-10-2018 IPR002035 von Willebrand factor, type A D934_09080 8cd70303b2aa4f2fed66cd83f7309189 941 Gene3D G3DSA:3.40.50.410 153 332 2.2E-13 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D934_09080 8cd70303b2aa4f2fed66cd83f7309189 941 SUPERFAMILY SSF53300 151 306 1.63E-13 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D934_09080 8cd70303b2aa4f2fed66cd83f7309189 941 Pfam PF13550 Putative phage tail protein 400 551 5.4E-10 T 15-10-2018 IPR032876 Tip attachment protein J D934_07860 8cd70303b2aa4f2fed66cd83f7309189 941 SMART SM00327 152 338 0.0098 T 15-10-2018 IPR002035 von Willebrand factor, type A D934_07860 8cd70303b2aa4f2fed66cd83f7309189 941 Gene3D G3DSA:3.40.50.410 153 332 2.2E-13 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D934_07860 8cd70303b2aa4f2fed66cd83f7309189 941 SUPERFAMILY SSF53300 151 306 1.63E-13 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D934_07860 8cd70303b2aa4f2fed66cd83f7309189 941 Pfam PF13550 Putative phage tail protein 400 551 5.4E-10 T 15-10-2018 IPR032876 Tip attachment protein J D934_04710 26303d57ea3bf0a49fca0e570324ab66 176 Gene3D G3DSA:2.60.450.10 23 158 3.3E-30 T 15-10-2018 D934_04710 26303d57ea3bf0a49fca0e570324ab66 176 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 23 161 2.8E-34 T 15-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 D934_04710 26303d57ea3bf0a49fca0e570324ab66 176 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 3 161 21.654 T 15-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 D934_04710 26303d57ea3bf0a49fca0e570324ab66 176 Pfam PF03968 OstA-like protein 34 143 1.9E-21 T 15-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal D934_02335 a447a2515dc866c4a594fe5910b9d851 363 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 229 242 - T 15-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02335 a447a2515dc866c4a594fe5910b9d851 363 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 24 357 24.124 T 15-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02335 a447a2515dc866c4a594fe5910b9d851 363 Pfam PF00146 NADH dehydrogenase 31 351 7.8E-118 T 15-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_06940 ec6b27ae85b9bc8106a60fb7287856a3 274 Pfam PF00535 Glycosyl transferase family 2 13 137 2.5E-21 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D934_06940 ec6b27ae85b9bc8106a60fb7287856a3 274 Gene3D G3DSA:3.90.550.10 7 257 5.2E-38 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_06940 ec6b27ae85b9bc8106a60fb7287856a3 274 SUPERFAMILY SSF53448 11 220 4.82E-32 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_11000 4f02301bfbaeae1b14371a9edd5f1e45 248 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 4 248 33.21 T 15-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 D934_11000 4f02301bfbaeae1b14371a9edd5f1e45 248 SUPERFAMILY SSF53167 5 247 8.76E-74 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 D934_11000 4f02301bfbaeae1b14371a9edd5f1e45 248 Pfam PF01048 Phosphorylase superfamily 6 222 1.8E-37 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 D934_11000 4f02301bfbaeae1b14371a9edd5f1e45 248 Gene3D G3DSA:3.40.50.1580 1 248 5.9E-75 T 15-10-2018 D934_11000 4f02301bfbaeae1b14371a9edd5f1e45 248 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 52 92 - T 15-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 D934_02290 8e6bb65327be37cf3db29931ec0e6447 132 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 2.4E-34 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D934_02290 8e6bb65327be37cf3db29931ec0e6447 132 PRINTS PR01651 Protein-export SecG membrane protein signature 2 22 2.4E-34 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D934_02290 8e6bb65327be37cf3db29931ec0e6447 132 PRINTS PR01651 Protein-export SecG membrane protein signature 37 53 2.4E-34 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D934_02290 8e6bb65327be37cf3db29931ec0e6447 132 PRINTS PR01651 Protein-export SecG membrane protein signature 22 36 2.4E-34 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D934_02290 8e6bb65327be37cf3db29931ec0e6447 132 Pfam PF03840 Preprotein translocase SecG subunit 3 70 4.9E-20 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D934_02290 8e6bb65327be37cf3db29931ec0e6447 132 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 71 1.1E-23 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D934_10175 bfdba25e1516065d85a67164151ff47e 257 SUPERFAMILY SSF111331 27 244 6.8E-55 T 15-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily D934_10175 bfdba25e1516065d85a67164151ff47e 257 Gene3D G3DSA:2.60.200.30 109 232 4.4E-25 T 15-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 D934_10175 bfdba25e1516065d85a67164151ff47e 257 Pfam PF01513 ATP-NAD kinase 36 219 8.6E-15 T 15-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 D934_10175 bfdba25e1516065d85a67164151ff47e 257 Gene3D G3DSA:3.40.50.10330 9 108 5.6E-11 T 15-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 D934_10175 bfdba25e1516065d85a67164151ff47e 257 Hamap MF_00361 NAD kinase [nadK]. 7 257 21.511 T 15-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 D934_08055 8ff46faef50d187fa0a9a56b7ae598fe 218 Gene3D G3DSA:3.10.450.710 34 210 1.0E-40 T 15-10-2018 D934_08055 8ff46faef50d187fa0a9a56b7ae598fe 218 Pfam PF05494 MlaC protein 45 206 8.8E-43 T 15-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC D934_08055 8ff46faef50d187fa0a9a56b7ae598fe 218 PIRSF PIRSF004649 9 218 4.7E-55 T 15-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC D934_03460 36691763e866751ff7bd9d2cc9948d0e 377 Gene3D G3DSA:3.40.50.1820 61 377 2.0E-83 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_03460 36691763e866751ff7bd9d2cc9948d0e 377 Pfam PF00561 alpha/beta hydrolase fold 70 181 1.1E-12 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D934_03460 36691763e866751ff7bd9d2cc9948d0e 377 SUPERFAMILY SSF53474 66 372 3.03E-38 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_12975 2ba17e7392c595b16c80a1e2035a8e57 356 SUPERFAMILY SSF51445 47 348 4.7E-42 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily D934_12975 2ba17e7392c595b16c80a1e2035a8e57 356 Pfam PF00704 Glycosyl hydrolases family 18 38 341 2.6E-29 T 15-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 D934_12975 2ba17e7392c595b16c80a1e2035a8e57 356 Gene3D G3DSA:3.10.50.10 249 314 1.7E-77 T 15-10-2018 IPR029070 Chitinase insertion domain superfamily D934_12975 2ba17e7392c595b16c80a1e2035a8e57 356 SMART SM00636 28 343 6.9E-30 T 15-10-2018 IPR011583 Chitinase II GO:0008061 D934_12975 2ba17e7392c595b16c80a1e2035a8e57 356 Gene3D G3DSA:3.20.20.80 50 348 1.7E-77 T 15-10-2018 D934_09660 62a96bd70d0c525872e8d9341bbfb68e 216 Pfam PF01625 Peptide methionine sulfoxide reductase 48 201 7.2E-62 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D934_09660 62a96bd70d0c525872e8d9341bbfb68e 216 Gene3D G3DSA:3.30.1060.10 8 216 1.9E-81 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D934_09660 62a96bd70d0c525872e8d9341bbfb68e 216 SUPERFAMILY SSF55068 17 211 1.96E-74 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D934_09660 62a96bd70d0c525872e8d9341bbfb68e 216 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 48 201 3.0E-60 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D934_09660 62a96bd70d0c525872e8d9341bbfb68e 216 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 45 207 36.666 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D934_01260 ed1a8913e45ba1754d84eef209d66640 184 SUPERFAMILY SSF49401 29 184 1.44E-25 T 15-10-2018 IPR008966 Adhesion domain superfamily D934_01260 ed1a8913e45ba1754d84eef209d66640 184 Gene3D G3DSA:2.60.40.1090 26 184 9.4E-33 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 D934_01260 ed1a8913e45ba1754d84eef209d66640 184 Pfam PF16970 Type-1 fimbrial protein, A 54 184 2.4E-20 T 15-10-2018 IPR039458 Type-1 fimbrial protein, A D934_03410 dbc61233c3bade07d29598b7af614135 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 147 15.977 T 15-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 D934_03410 dbc61233c3bade07d29598b7af614135 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 145 1.2E-39 T 15-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03410 dbc61233c3bade07d29598b7af614135 147 Gene3D G3DSA:3.100.10.10 74 147 8.7E-7 T 15-10-2018 D934_03410 dbc61233c3bade07d29598b7af614135 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 145 1.3E-22 T 15-10-2018 IPR021131 Ribosomal protein L18e/L15P D934_03410 dbc61233c3bade07d29598b7af614135 147 SUPERFAMILY SSF52080 6 145 3.01E-34 T 15-10-2018 IPR036227 Ribosomal L18e/L15P superfamily D934_06470 855e33f51e6208dfd31bf9c3fa856aee 251 SUPERFAMILY SSF51161 15 204 5.47E-31 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily D934_06470 855e33f51e6208dfd31bf9c3fa856aee 251 Gene3D G3DSA:2.160.10.10 25 126 1.8E-17 T 15-10-2018 D934_06470 855e33f51e6208dfd31bf9c3fa856aee 251 Gene3D G3DSA:2.160.10.10 127 212 4.7E-13 T 15-10-2018 D934_06470 855e33f51e6208dfd31bf9c3fa856aee 251 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 135 165 1.0E-5 T 15-10-2018 IPR001451 Hexapeptide repeat D934_06470 855e33f51e6208dfd31bf9c3fa856aee 251 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 54 91 1.0E-4 T 15-10-2018 IPR001451 Hexapeptide repeat D934_06470 855e33f51e6208dfd31bf9c3fa856aee 251 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 157 185 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_10070 79be406d81c263430b13d7123bb7aeda 116 Pfam PF00239 Resolvase, N terminal domain 2 59 9.2E-15 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D934_10070 79be406d81c263430b13d7123bb7aeda 116 Gene3D G3DSA:3.40.50.1390 1 66 5.2E-13 T 15-10-2018 D934_10070 79be406d81c263430b13d7123bb7aeda 116 SUPERFAMILY SSF53041 3 59 1.96E-13 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 D934_06530 1cc065801f592a1193042a72c4042b00 110 Pfam PF01934 Protein of unknown function DUF86 1 98 8.9E-25 T 15-10-2018 IPR008201 Protein of unknown function DUF86 D934_06530 1cc065801f592a1193042a72c4042b00 110 SUPERFAMILY SSF81593 21 99 3.06E-5 T 15-10-2018 D934_11490 fe0dceec77913d5d88a27daf892764a8 197 Gene3D G3DSA:3.40.30.10 31 189 2.3E-35 T 15-10-2018 D934_11490 fe0dceec77913d5d88a27daf892764a8 197 Pfam PF08534 Redoxin 46 169 9.3E-14 T 15-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 D934_11490 fe0dceec77913d5d88a27daf892764a8 197 ProSitePatterns PS00194 Thioredoxin family active site. 75 93 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 D934_11490 fe0dceec77913d5d88a27daf892764a8 197 SUPERFAMILY SSF52833 50 182 2.3E-30 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_11490 fe0dceec77913d5d88a27daf892764a8 197 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 33 180 1.3E-43 T 15-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 D934_09975 6cfa74fc7600ef6e198beb4727a45102 185 Pfam PF03695 Uncharacterised protein family (UPF0149) 15 172 1.0E-29 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 D934_09975 6cfa74fc7600ef6e198beb4727a45102 185 SUPERFAMILY SSF101327 9 173 6.28E-40 T 15-10-2018 IPR036255 YgfB-like superfamily D934_09975 6cfa74fc7600ef6e198beb4727a45102 185 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 25 164 9.7E-11 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 D934_09975 6cfa74fc7600ef6e198beb4727a45102 185 Gene3D G3DSA:1.20.120.740 1 179 8.6E-47 T 15-10-2018 D934_09975 6cfa74fc7600ef6e198beb4727a45102 185 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 185 30.67 T 15-10-2018 IPR011978 Uncharacterised protein family UPF0149 D934_00640 17891d9153bb01c1e946572a49a51d5c 513 Pfam PF11855 Protein of unknown function (DUF3375) 12 490 1.5E-152 T 15-10-2018 IPR021804 Protein of unknown function DUF3375 D934_02690 415dba8d4aacfadc3112545e844a8de7 234 SUPERFAMILY SSF53098 9 221 3.64E-66 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily D934_02690 415dba8d4aacfadc3112545e844a8de7 234 Hamap MF_00052_B Ribonuclease HII [rnhB]. 17 198 35.938 T 15-10-2018 IPR022898 Ribonuclease HII GO:0004523 D934_02690 415dba8d4aacfadc3112545e844a8de7 234 Pfam PF01351 Ribonuclease HII 19 197 2.0E-35 T 15-10-2018 IPR024567 Ribonuclease HII/HIII domain D934_02690 415dba8d4aacfadc3112545e844a8de7 234 Gene3D G3DSA:3.30.420.10 1 230 1.2E-73 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D934_00940 9fccecdcc99e9a2dac9ca541a87c98b0 276 Pfam PF02517 CAAX protease self-immunity 166 264 1.2E-16 T 15-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 D934_05795 14ac0bd8a8ced078a5bcc6c4095b4ede 413 Gene3D G3DSA:3.40.50.720 111 299 2.2E-104 T 15-10-2018 D934_05795 14ac0bd8a8ced078a5bcc6c4095b4ede 413 SUPERFAMILY SSF52283 10 137 3.61E-44 T 15-10-2018 D934_05795 14ac0bd8a8ced078a5bcc6c4095b4ede 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 328 5.7E-35 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 D934_05795 14ac0bd8a8ced078a5bcc6c4095b4ede 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 156 183 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 D934_05795 14ac0bd8a8ced078a5bcc6c4095b4ede 413 SUPERFAMILY SSF51735 110 297 3.58E-56 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_05795 14ac0bd8a8ced078a5bcc6c4095b4ede 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 202 224 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D934_05795 14ac0bd8a8ced078a5bcc6c4095b4ede 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 296 1.3E-51 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 D934_05795 14ac0bd8a8ced078a5bcc6c4095b4ede 413 SUPERFAMILY SSF55021 335 412 6.49E-15 T 15-10-2018 D934_05795 14ac0bd8a8ced078a5bcc6c4095b4ede 413 Gene3D G3DSA:3.30.70.260 330 412 2.2E-28 T 15-10-2018 D934_05795 14ac0bd8a8ced078a5bcc6c4095b4ede 413 Gene3D G3DSA:3.40.50.720 16 314 2.2E-104 T 15-10-2018 D934_12625 bceb23a641ccac53bb49b09ac331e1d3 202 Gene3D G3DSA:3.30.160.150 37 187 1.6E-29 T 15-10-2018 D934_12625 bceb23a641ccac53bb49b09ac331e1d3 202 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 180 23.973 T 15-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 D934_02815 67ddc20455d8d1d480421f1cab5c3296 394 Gene3D G3DSA:2.40.50.940 253 384 4.1E-30 T 15-10-2018 D934_02815 67ddc20455d8d1d480421f1cab5c3296 394 Gene3D G3DSA:2.40.50.140 319 375 4.1E-30 T 15-10-2018 D934_02815 67ddc20455d8d1d480421f1cab5c3296 394 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_02815 67ddc20455d8d1d480421f1cab5c3296 394 Gene3D G3DSA:3.40.50.300 33 252 1.9E-61 T 15-10-2018 D934_02815 67ddc20455d8d1d480421f1cab5c3296 394 SUPERFAMILY SSF52540 34 272 4.48E-81 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_02815 67ddc20455d8d1d480421f1cab5c3296 394 SUPERFAMILY SSF50331 268 391 2.16E-26 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal D934_02815 67ddc20455d8d1d480421f1cab5c3296 394 Pfam PF08402 TOBE domain 312 383 1.1E-9 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 D934_02815 67ddc20455d8d1d480421f1cab5c3296 394 SMART SM00382 59 241 1.2E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_02815 67ddc20455d8d1d480421f1cab5c3296 394 Pfam PF00005 ABC transporter 52 192 7.9E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_03530 b4201bb879d6879f37dabd750a23e790 345 Pfam PF04332 Protein of unknown function (DUF475) 49 339 1.9E-131 T 15-10-2018 IPR007427 Protein of unknown function DUF475 D934_03850 992f0d5b3b5178d86ff9d4c66acd8b80 725 SMART SM00869 465 691 4.4E-9 T 15-10-2018 IPR005546 Autotransporter beta-domain D934_03850 992f0d5b3b5178d86ff9d4c66acd8b80 725 Gene3D G3DSA:2.40.128.130 423 725 3.0E-16 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily D934_03850 992f0d5b3b5178d86ff9d4c66acd8b80 725 SUPERFAMILY SSF103515 444 706 4.05E-26 T 15-10-2018 IPR036709 Autotransporter beta-domain superfamily D934_03850 992f0d5b3b5178d86ff9d4c66acd8b80 725 Pfam PF03797 Autotransporter beta-domain 518 702 6.9E-14 T 15-10-2018 IPR005546 Autotransporter beta-domain D934_09990 b61a2ab301cc26bdccd02278e1cb3210 196 SUPERFAMILY SSF100950 4 190 7.12E-50 T 15-10-2018 IPR037171 NagB/RpiA transferase-like D934_09990 b61a2ab301cc26bdccd02278e1cb3210 196 PIRSF PIRSF006806 1 186 1.4E-31 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase D934_09990 b61a2ab301cc26bdccd02278e1cb3210 196 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 184 2.8E-34 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase D934_09990 b61a2ab301cc26bdccd02278e1cb3210 196 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 184 1.2E-46 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase D934_09990 b61a2ab301cc26bdccd02278e1cb3210 196 Gene3D G3DSA:3.40.50.10420 4 193 1.3E-45 T 15-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily D934_01290 740eb6f61c0f084c1c17ca54f32203e7 317 Pfam PF01715 IPP transferase 43 292 3.1E-79 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 D934_01290 740eb6f61c0f084c1c17ca54f32203e7 317 SUPERFAMILY SSF52540 10 154 7.72E-20 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_01290 740eb6f61c0f084c1c17ca54f32203e7 317 Gene3D G3DSA:3.40.50.300 13 299 2.0E-96 T 15-10-2018 D934_01290 740eb6f61c0f084c1c17ca54f32203e7 317 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 312 29.083 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 D934_01290 740eb6f61c0f084c1c17ca54f32203e7 317 Gene3D G3DSA:1.10.20.140 116 188 2.0E-96 T 15-10-2018 D934_01290 740eb6f61c0f084c1c17ca54f32203e7 317 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 302 3.6E-92 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 D934_01010 3b85118e0135194a49e02155f69704a0 364 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 348 1.2E-157 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 D934_01010 3b85118e0135194a49e02155f69704a0 364 SUPERFAMILY SSF51569 7 348 1.26E-132 T 15-10-2018 D934_01010 3b85118e0135194a49e02155f69704a0 364 PIRSF PIRSF001361 3 351 3.1E-155 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 D934_01010 3b85118e0135194a49e02155f69704a0 364 Gene3D G3DSA:3.20.20.70 3 350 3.5E-157 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_01010 3b85118e0135194a49e02155f69704a0 364 Pfam PF00793 DAHP synthetase I family 41 338 6.5E-96 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D934_13460 91f0aaba6636ba5921821de9885e193a 287 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 18 123 1.9E-26 T 15-10-2018 IPR010627 Peptidase A24A, N-terminal D934_13460 91f0aaba6636ba5921821de9885e193a 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 210 221 1.0E-17 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial D934_13460 91f0aaba6636ba5921821de9885e193a 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 222 237 1.0E-17 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial D934_13460 91f0aaba6636ba5921821de9885e193a 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 142 159 1.0E-17 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial D934_13460 91f0aaba6636ba5921821de9885e193a 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 199 209 1.0E-17 T 15-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial D934_13460 91f0aaba6636ba5921821de9885e193a 287 Pfam PF01478 Type IV leader peptidase family 133 241 7.2E-22 T 15-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 D934_07425 13dbe11619a4e959affa71cb2729e215 342 Gene3D G3DSA:3.40.50.1100 19 305 2.0E-88 T 15-10-2018 D934_07425 13dbe11619a4e959affa71cb2729e215 342 SUPERFAMILY SSF53686 16 307 3.8E-78 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D934_07425 13dbe11619a4e959affa71cb2729e215 342 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 292 9.2E-69 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D934_07425 13dbe11619a4e959affa71cb2729e215 342 Gene3D G3DSA:3.40.50.1100 56 152 2.0E-88 T 15-10-2018 D934_13185 dc1a3846c2c36703b31155432ecf969c 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_13185 dc1a3846c2c36703b31155432ecf969c 361 Pfam PF00953 Glycosyl transferase family 4 99 285 2.4E-34 T 15-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 D934_13185 dc1a3846c2c36703b31155432ecf969c 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 24.491 T 15-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_13185 dc1a3846c2c36703b31155432ecf969c 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 4.3E-129 T 15-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_13185 dc1a3846c2c36703b31155432ecf969c 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_06390 1cf0deae2c5e6670f0d8e8c54df8f874 297 Pfam PF04865 Baseplate J-like protein 113 254 1.7E-24 T 15-10-2018 IPR006949 Baseplate protein J-like D934_06390 1cf0deae2c5e6670f0d8e8c54df8f874 297 PIRSF PIRSF020481 5 297 7.7E-118 T 15-10-2018 IPR014507 Baseplate assembly protein J, predicted D934_00920 0e152b4c40584f89e94d2539e34958db 366 Gene3D G3DSA:3.10.150.10 122 248 1.5E-36 T 15-10-2018 D934_00920 0e152b4c40584f89e94d2539e34958db 366 SUPERFAMILY SSF55979 246 366 1.78E-32 T 15-10-2018 D934_00920 0e152b4c40584f89e94d2539e34958db 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 132 243 6.2E-36 T 15-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 D934_00920 0e152b4c40584f89e94d2539e34958db 366 SUPERFAMILY SSF55979 127 244 1.32E-26 T 15-10-2018 D934_00920 0e152b4c40584f89e94d2539e34958db 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 7.1E-35 T 15-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 D934_00920 0e152b4c40584f89e94d2539e34958db 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 365 1.1E-33 T 15-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 D934_00920 0e152b4c40584f89e94d2539e34958db 366 Gene3D G3DSA:3.10.150.10 1 121 8.8E-40 T 15-10-2018 D934_00920 0e152b4c40584f89e94d2539e34958db 366 SUPERFAMILY SSF55979 1 116 1.17E-26 T 15-10-2018 D934_00920 0e152b4c40584f89e94d2539e34958db 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.6E-105 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 D934_00920 0e152b4c40584f89e94d2539e34958db 366 PIRSF PIRSF000804 1 366 6.8E-116 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 D934_00920 0e152b4c40584f89e94d2539e34958db 366 Gene3D G3DSA:3.10.150.10 249 366 7.9E-36 T 15-10-2018 D934_00920 0e152b4c40584f89e94d2539e34958db 366 SMART SM00480 17 362 4.6E-130 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 D934_13215 2b924fee95a84096292324524a4a5db8 170 SUPERFAMILY SSF89447 21 158 1.15E-33 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily D934_13215 2b924fee95a84096292324524a4a5db8 170 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 170 41.572 T 15-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 D934_13215 2b924fee95a84096292324524a4a5db8 170 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 24 147 2.0E-68 T 15-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 D934_13215 2b924fee95a84096292324524a4a5db8 170 Gene3D G3DSA:2.40.330.20 20 163 9.2E-32 T 15-10-2018 IPR038619 MraZ superfamily D934_13215 2b924fee95a84096292324524a4a5db8 170 Pfam PF02381 MraZ protein, putative antitoxin-like 24 94 2.6E-8 T 15-10-2018 IPR020603 MraZ domain D934_13215 2b924fee95a84096292324524a4a5db8 170 Pfam PF02381 MraZ protein, putative antitoxin-like 107 155 8.2E-12 T 15-10-2018 IPR020603 MraZ domain D934_02465 bc41f3b4b8566ed083ccbd8f70cc760c 554 SMART SM00267 382 553 1.4E-49 T 15-10-2018 IPR000160 GGDEF domain D934_02465 bc41f3b4b8566ed083ccbd8f70cc760c 554 Pfam PF00990 Diguanylate cyclase, GGDEF domain 393 549 8.5E-39 T 15-10-2018 IPR000160 GGDEF domain D934_02465 bc41f3b4b8566ed083ccbd8f70cc760c 554 Pfam PF07695 7TM diverse intracellular signalling 171 377 1.9E-21 T 15-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 D934_02465 bc41f3b4b8566ed083ccbd8f70cc760c 554 Gene3D G3DSA:3.30.70.270 379 553 3.0E-51 T 15-10-2018 D934_02465 bc41f3b4b8566ed083ccbd8f70cc760c 554 Pfam PF07696 7TMR-DISM extracellular 2 65 157 1.1E-6 T 15-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 D934_02465 bc41f3b4b8566ed083ccbd8f70cc760c 554 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 393 551 1.7E-42 T 15-10-2018 IPR000160 GGDEF domain D934_02465 bc41f3b4b8566ed083ccbd8f70cc760c 554 SUPERFAMILY SSF55073 398 551 1.33E-42 T 15-10-2018 IPR029787 Nucleotide cyclase D934_06250 4f97574e8564ad18ab1c333b7b590f68 245 Pfam PF01381 Helix-turn-helix 17 72 1.2E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_06250 4f97574e8564ad18ab1c333b7b590f68 245 Gene3D G3DSA:2.10.109.10 113 244 2.8E-5 T 15-10-2018 D934_06250 4f97574e8564ad18ab1c333b7b590f68 245 Gene3D G3DSA:1.10.260.40 13 79 8.2E-13 T 15-10-2018 D934_06250 4f97574e8564ad18ab1c333b7b590f68 245 SMART SM00530 16 72 1.1E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_06250 4f97574e8564ad18ab1c333b7b590f68 245 SUPERFAMILY SSF47413 9 74 2.0E-12 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_06250 4f97574e8564ad18ab1c333b7b590f68 245 Pfam PF00717 Peptidase S24-like 148 211 2.8E-8 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D934_06250 4f97574e8564ad18ab1c333b7b590f68 245 SUPERFAMILY SSF51306 127 242 3.92E-14 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily D934_01750 19ff38b4c188851749a494ce37078367 143 Pfam PF01957 NfeD-like C-terminal, partner-binding 8 142 9.3E-25 T 15-10-2018 IPR002810 NfeD-like, C-terminal domain D934_03200 f568da998a8d8cffde89b5aa66c36635 497 Pfam PF10150 Ribonuclease E/G family 130 401 6.6E-99 T 15-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 D934_03200 f568da998a8d8cffde89b5aa66c36635 497 SUPERFAMILY SSF50249 39 134 2.29E-16 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_03200 f568da998a8d8cffde89b5aa66c36635 497 Pfam PF00575 S1 RNA binding domain 38 125 3.5E-5 T 15-10-2018 IPR003029 S1 domain GO:0003676 D934_03200 f568da998a8d8cffde89b5aa66c36635 497 SMART SM00316 37 128 3.3E-6 T 15-10-2018 IPR022967 RNA-binding domain, S1 D934_03200 f568da998a8d8cffde89b5aa66c36635 497 Gene3D G3DSA:2.40.50.140 33 133 4.5E-30 T 15-10-2018 D934_03200 f568da998a8d8cffde89b5aa66c36635 497 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 434 3.4E-150 T 15-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 D934_03200 f568da998a8d8cffde89b5aa66c36635 497 Gene3D G3DSA:3.40.1260.20 410 497 1.9E-6 T 15-10-2018 D934_06285 6d7f6e9873789b8eb1324cb8dd6b603e 203 Pfam PF02498 BRO family, N-terminal domain 15 102 6.7E-23 T 15-10-2018 IPR003497 BRO N-terminal domain D934_06285 6d7f6e9873789b8eb1324cb8dd6b603e 203 SMART SM01040 14 102 2.8E-23 T 15-10-2018 IPR003497 BRO N-terminal domain D934_13340 8644b2566b26a3c901fcb7094713974d 162 SUPERFAMILY SSF52540 28 130 2.03E-14 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_13340 8644b2566b26a3c901fcb7094713974d 162 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 125 7.8E-29 T 15-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 D934_13340 8644b2566b26a3c901fcb7094713974d 162 Gene3D G3DSA:3.40.50.300 1 150 1.7E-32 T 15-10-2018 D934_13340 8644b2566b26a3c901fcb7094713974d 162 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 7 136 2.6E-31 T 15-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 D934_06965 01a605470c7f762819fe7f1b298c876d 863 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 544 831 2.1E-89 T 15-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal D934_06965 01a605470c7f762819fe7f1b298c876d 863 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 23 304 3.7E-10 T 15-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD D934_06965 01a605470c7f762819fe7f1b298c876d 863 SUPERFAMILY SSF55729 649 829 7.95E-16 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase D934_07560 89daf93a8bda46345d8f5a97243cac25 475 SUPERFAMILY SSF52172 8 191 3.98E-38 T 15-10-2018 IPR011006 CheY-like superfamily D934_07560 89daf93a8bda46345d8f5a97243cac25 475 Pfam PF00072 Response regulator receiver domain 11 119 1.2E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_07560 89daf93a8bda46345d8f5a97243cac25 475 Pfam PF02954 Bacterial regulatory protein, Fis family 434 467 1.8E-8 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D934_07560 89daf93a8bda46345d8f5a97243cac25 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 453 473 5.3E-5 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D934_07560 89daf93a8bda46345d8f5a97243cac25 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 453 5.3E-5 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D934_07560 89daf93a8bda46345d8f5a97243cac25 475 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 11 468 2.4E-205 T 15-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 D934_07560 89daf93a8bda46345d8f5a97243cac25 475 SUPERFAMILY SSF46689 402 467 5.38E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D934_07560 89daf93a8bda46345d8f5a97243cac25 475 SUPERFAMILY SSF52540 147 391 3.33E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_07560 89daf93a8bda46345d8f5a97243cac25 475 Gene3D G3DSA:1.10.10.60 392 470 3.7E-16 T 15-10-2018 D934_07560 89daf93a8bda46345d8f5a97243cac25 475 Gene3D G3DSA:3.40.50.300 140 317 1.8E-62 T 15-10-2018 D934_07560 89daf93a8bda46345d8f5a97243cac25 475 Pfam PF00158 Sigma-54 interaction domain 147 313 3.8E-67 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D934_07560 89daf93a8bda46345d8f5a97243cac25 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 15-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D934_07560 89daf93a8bda46345d8f5a97243cac25 475 Gene3D G3DSA:3.40.50.2300 6 133 4.1E-32 T 15-10-2018 D934_07560 89daf93a8bda46345d8f5a97243cac25 475 Gene3D G3DSA:1.10.8.60 318 391 1.7E-21 T 15-10-2018 D934_07560 89daf93a8bda46345d8f5a97243cac25 475 SMART SM00382 167 310 2.5E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_07560 89daf93a8bda46345d8f5a97243cac25 475 SMART SM00448 9 124 1.1E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_07560 89daf93a8bda46345d8f5a97243cac25 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site D934_07560 89daf93a8bda46345d8f5a97243cac25 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D934_05525 2b723eabb0e6d07bd3f62c9041ca0c7f 170 Gene3D G3DSA:3.90.45.10 1 170 2.9E-61 T 15-10-2018 IPR036821 Peptide deformylase superfamily D934_05525 2b723eabb0e6d07bd3f62c9041ca0c7f 170 Hamap MF_00163 Peptide deformylase [def]. 2 165 31.037 T 15-10-2018 IPR023635 Peptide deformylase D934_05525 2b723eabb0e6d07bd3f62c9041ca0c7f 170 PRINTS PR01576 Peptide deformylase signature 36 65 3.6E-37 T 15-10-2018 IPR023635 Peptide deformylase D934_05525 2b723eabb0e6d07bd3f62c9041ca0c7f 170 PRINTS PR01576 Peptide deformylase signature 92 103 3.6E-37 T 15-10-2018 IPR023635 Peptide deformylase D934_05525 2b723eabb0e6d07bd3f62c9041ca0c7f 170 PRINTS PR01576 Peptide deformylase signature 104 122 3.6E-37 T 15-10-2018 IPR023635 Peptide deformylase D934_05525 2b723eabb0e6d07bd3f62c9041ca0c7f 170 PRINTS PR01576 Peptide deformylase signature 123 152 3.6E-37 T 15-10-2018 IPR023635 Peptide deformylase D934_05525 2b723eabb0e6d07bd3f62c9041ca0c7f 170 PIRSF PIRSF004749 1 170 5.2E-56 T 15-10-2018 IPR023635 Peptide deformylase D934_05525 2b723eabb0e6d07bd3f62c9041ca0c7f 170 SUPERFAMILY SSF56420 2 167 2.62E-62 T 15-10-2018 IPR036821 Peptide deformylase superfamily D934_05525 2b723eabb0e6d07bd3f62c9041ca0c7f 170 Pfam PF01327 Polypeptide deformylase 5 155 8.9E-51 T 15-10-2018 IPR023635 Peptide deformylase D934_05525 2b723eabb0e6d07bd3f62c9041ca0c7f 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 162 1.1E-51 T 15-10-2018 IPR023635 Peptide deformylase D934_09755 6f6a2eb5fd07f595526e5d6fcf5bd625 722 SUPERFAMILY SSF109604 346 492 6.28E-14 T 15-10-2018 D934_09755 6f6a2eb5fd07f595526e5d6fcf5bd625 722 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 582 1.5E-186 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09755 6f6a2eb5fd07f595526e5d6fcf5bd625 722 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 5 720 6.3E-200 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09755 6f6a2eb5fd07f595526e5d6fcf5bd625 722 Pfam PF05746 DALR anticodon binding domain 614 709 2.3E-6 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 D934_09755 6f6a2eb5fd07f595526e5d6fcf5bd625 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 53 65 7.9E-28 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09755 6f6a2eb5fd07f595526e5d6fcf5bd625 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 396 415 7.9E-28 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09755 6f6a2eb5fd07f595526e5d6fcf5bd625 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 320 336 7.9E-28 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09755 6f6a2eb5fd07f595526e5d6fcf5bd625 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 7.9E-28 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09755 6f6a2eb5fd07f595526e5d6fcf5bd625 722 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 7.9E-28 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_09755 6f6a2eb5fd07f595526e5d6fcf5bd625 722 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 720 25.055 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D934_10615 27ca34ab90ef03c6adb27354f251008e 138 Gene3D G3DSA:3.30.160.510 62 129 1.1E-23 T 15-10-2018 D934_10615 27ca34ab90ef03c6adb27354f251008e 138 SUPERFAMILY SSF81273 87 116 1.73E-5 T 15-10-2018 D934_10615 27ca34ab90ef03c6adb27354f251008e 138 Pfam PF00816 H-NS histone family 18 116 3.8E-16 T 15-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 D934_10615 27ca34ab90ef03c6adb27354f251008e 138 SMART SM00528 83 126 3.2E-8 T 15-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 D934_10535 a401fbff6f8ceaf7bdff9c6655de32e1 395 SMART SM00729 18 235 3.4E-51 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D934_10535 a401fbff6f8ceaf7bdff9c6655de32e1 395 Gene3D G3DSA:3.80.30.20 13 307 3.4E-99 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe D934_10535 a401fbff6f8ceaf7bdff9c6655de32e1 395 Pfam PF04055 Radical SAM superfamily 23 189 2.9E-19 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D934_10535 a401fbff6f8ceaf7bdff9c6655de32e1 395 Pfam PF06969 HemN C-terminal domain 326 382 1.8E-7 T 15-10-2018 IPR010723 HemN, C-terminal D934_10535 a401fbff6f8ceaf7bdff9c6655de32e1 395 SUPERFAMILY SSF102114 11 393 1.96E-105 T 15-10-2018 D934_10535 a401fbff6f8ceaf7bdff9c6655de32e1 395 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 19 366 1.4E-108 T 15-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 D934_09930 0f3e595c176e0e62379c6158ffa2c4cc 216 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 42 215 5.1E-78 T 15-10-2018 IPR017776 FeS assembly SUF system protein SufT, putative D934_09930 0f3e595c176e0e62379c6158ffa2c4cc 216 Gene3D G3DSA:3.30.300.130 108 215 1.9E-31 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily D934_09930 0f3e595c176e0e62379c6158ffa2c4cc 216 SUPERFAMILY SSF117916 114 214 7.52E-25 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily D934_09930 0f3e595c176e0e62379c6158ffa2c4cc 216 Pfam PF01883 Iron-sulfur cluster assembly protein 118 192 1.9E-10 T 15-10-2018 IPR002744 MIP18 family-like D934_05880 bbdee91727e29b8c698b09858019df47 430 Pfam PF14821 Threonine synthase N terminus 3 60 4.7E-10 T 15-10-2018 IPR029144 Threonine synthase, N-terminal D934_05880 bbdee91727e29b8c698b09858019df47 430 Gene3D G3DSA:3.90.1380.10 1 78 4.8E-12 T 15-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily D934_05880 bbdee91727e29b8c698b09858019df47 430 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 94 108 - T 15-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 D934_05880 bbdee91727e29b8c698b09858019df47 430 SUPERFAMILY SSF53686 1 428 1.57E-120 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D934_05880 bbdee91727e29b8c698b09858019df47 430 TIGRFAM TIGR00260 thrC: threonine synthase 84 396 3.6E-68 T 15-10-2018 IPR004450 Threonine synthase-like D934_05880 bbdee91727e29b8c698b09858019df47 430 Gene3D G3DSA:3.40.50.1100 89 397 1.2E-120 T 15-10-2018 D934_05880 bbdee91727e29b8c698b09858019df47 430 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 95 377 5.9E-22 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D934_05880 bbdee91727e29b8c698b09858019df47 430 Gene3D G3DSA:3.40.50.1100 100 403 1.2E-120 T 15-10-2018 D934_00955 b4882624b84405ee2232df32a0d7fa1c 221 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 145 221 2.5E-24 T 15-10-2018 IPR006260 TonB/TolA, C-terminal D934_00955 b4882624b84405ee2232df32a0d7fa1c 221 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 144 221 6.7E-24 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 D934_00955 b4882624b84405ee2232df32a0d7fa1c 221 Gene3D G3DSA:3.30.1150.10 127 221 8.6E-27 T 15-10-2018 D934_00955 b4882624b84405ee2232df32a0d7fa1c 221 PRINTS PR01217 Proline rich extensin signature 85 102 9.3E-10 T 15-10-2018 D934_00955 b4882624b84405ee2232df32a0d7fa1c 221 PRINTS PR01217 Proline rich extensin signature 68 84 9.3E-10 T 15-10-2018 D934_00955 b4882624b84405ee2232df32a0d7fa1c 221 PRINTS PR01217 Proline rich extensin signature 103 128 9.3E-10 T 15-10-2018 D934_00955 b4882624b84405ee2232df32a0d7fa1c 221 PRINTS PR01217 Proline rich extensin signature 46 67 9.3E-10 T 15-10-2018 D934_00955 b4882624b84405ee2232df32a0d7fa1c 221 SUPERFAMILY SSF74653 143 219 1.96E-23 T 15-10-2018 D934_08375 2071fc4d3464f1ad997f54d9b8aae0f0 544 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 6 153 2.6E-21 T 15-10-2018 IPR017482 Putative phage-type endonuclease D934_08375 2071fc4d3464f1ad997f54d9b8aae0f0 544 Gene3D G3DSA:3.90.320.10 6 196 2.3E-19 T 15-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal D934_08375 2071fc4d3464f1ad997f54d9b8aae0f0 544 Pfam PF09588 YqaJ-like viral recombinase domain 12 147 4.0E-11 T 15-10-2018 IPR019080 YqaJ viral recombinase D934_08375 2071fc4d3464f1ad997f54d9b8aae0f0 544 SUPERFAMILY SSF52980 1 154 2.31E-20 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 D934_08375 2071fc4d3464f1ad997f54d9b8aae0f0 544 PIRSF PIRSF028503 1 544 0.0 T 15-10-2018 IPR016889 Uncharacterised conserved protein UCP028503 D934_00520 04865440b9fd3367466abb5d44817e34 1489 SUPERFAMILY SSF69336 1220 1475 1.7E-83 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 D934_00520 04865440b9fd3367466abb5d44817e34 1489 Pfam PF01493 GXGXG motif 1246 1428 2.3E-74 T 15-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 D934_00520 04865440b9fd3367466abb5d44817e34 1489 SUPERFAMILY SSF56235 24 439 5.55E-132 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D934_00520 04865440b9fd3367466abb5d44817e34 1489 Pfam PF01645 Conserved region in glutamate synthase 805 1167 7.7E-149 T 15-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 D934_00520 04865440b9fd3367466abb5d44817e34 1489 Gene3D G3DSA:3.20.20.70 492 1183 0.0 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_00520 04865440b9fd3367466abb5d44817e34 1489 Gene3D G3DSA:3.20.20.70 441 804 0.0 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_00520 04865440b9fd3367466abb5d44817e34 1489 Pfam PF04898 Glutamate synthase central domain 466 749 2.0E-97 T 15-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 D934_00520 04865440b9fd3367466abb5d44817e34 1489 Gene3D G3DSA:2.160.20.60 1209 1479 4.6E-97 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 D934_00520 04865440b9fd3367466abb5d44817e34 1489 Gene3D G3DSA:3.60.20.10 24 554 0.0 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D934_00520 04865440b9fd3367466abb5d44817e34 1489 SUPERFAMILY SSF51395 455 1201 1.37E-248 T 15-10-2018 D934_00520 04865440b9fd3367466abb5d44817e34 1489 Pfam PF00310 Glutamine amidotransferases class-II 24 436 1.9E-157 T 15-10-2018 IPR017932 Glutamine amidotransferase type 2 domain D934_09745 5dd8eec6bd410c0a2afacb480e6eef26 299 Gene3D G3DSA:3.30.1150.10 85 289 2.4E-20 T 15-10-2018 D934_09745 5dd8eec6bd410c0a2afacb480e6eef26 299 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 212 280 3.6E-17 T 15-10-2018 IPR037682 TonB, C-terminal GO:0055085 D934_09745 5dd8eec6bd410c0a2afacb480e6eef26 299 SUPERFAMILY SSF74653 181 294 2.49E-21 T 15-10-2018 D934_09745 5dd8eec6bd410c0a2afacb480e6eef26 299 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 214 289 1.1E-19 T 15-10-2018 IPR006260 TonB/TolA, C-terminal D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 447 44.942 T 15-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 1.0E-43 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 SUPERFAMILY SSF53738 158 258 1.57E-28 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 Gene3D G3DSA:3.40.120.10 176 363 2.7E-62 T 15-10-2018 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 SUPERFAMILY SSF55957 360 447 3.79E-17 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 256 1.7E-18 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 SUPERFAMILY SSF53738 4 168 4.32E-45 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 387 444 3.0E-10 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 Gene3D G3DSA:3.40.120.10 3 156 7.4E-48 T 15-10-2018 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 Gene3D G3DSA:3.40.120.10 259 341 2.7E-62 T 15-10-2018 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 SUPERFAMILY SSF53738 260 364 3.1E-29 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 Gene3D G3DSA:3.30.310.50 372 448 8.0E-18 T 15-10-2018 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 365 3.6E-29 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 445 5.4E-202 T 15-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 5.2E-14 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 5.2E-14 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_04970 5d3b48889458d3818e0158f5ccfd6c31 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 5.2E-14 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D934_06715 e8b519fd7ae1fc4ad0a981e12ea31c8c 134 SUPERFAMILY SSF88723 3 133 1.79E-36 T 15-10-2018 IPR029060 PIN-like domain superfamily D934_06715 e8b519fd7ae1fc4ad0a981e12ea31c8c 134 Gene3D G3DSA:3.40.50.1010 2 131 1.5E-34 T 15-10-2018 D934_06715 e8b519fd7ae1fc4ad0a981e12ea31c8c 134 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 130 9.8 T 15-10-2018 IPR022907 VapC family GO:0004540 D934_06715 e8b519fd7ae1fc4ad0a981e12ea31c8c 134 Pfam PF01850 PIN domain 4 124 4.9E-17 T 15-10-2018 IPR002716 PIN domain D934_08605 e8b519fd7ae1fc4ad0a981e12ea31c8c 134 SUPERFAMILY SSF88723 3 133 1.79E-36 T 15-10-2018 IPR029060 PIN-like domain superfamily D934_08605 e8b519fd7ae1fc4ad0a981e12ea31c8c 134 Gene3D G3DSA:3.40.50.1010 2 131 1.5E-34 T 15-10-2018 D934_08605 e8b519fd7ae1fc4ad0a981e12ea31c8c 134 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 130 9.8 T 15-10-2018 IPR022907 VapC family GO:0004540 D934_08605 e8b519fd7ae1fc4ad0a981e12ea31c8c 134 Pfam PF01850 PIN domain 4 124 4.9E-17 T 15-10-2018 IPR002716 PIN domain D934_01400 61c1529ac6e9c10f1cd3843f4c1412ea 377 SUPERFAMILY SSF55031 179 286 2.09E-27 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain D934_01400 61c1529ac6e9c10f1cd3843f4c1412ea 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 49.733 T 15-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 D934_01400 61c1529ac6e9c10f1cd3843f4c1412ea 377 Gene3D G3DSA:3.40.630.10 7 362 2.0E-124 T 15-10-2018 D934_01400 61c1529ac6e9c10f1cd3843f4c1412ea 377 SUPERFAMILY SSF53187 2 374 5.19E-64 T 15-10-2018 D934_01400 61c1529ac6e9c10f1cd3843f4c1412ea 377 Pfam PF01546 Peptidase family M20/M25/M40 63 371 7.2E-41 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 D934_01400 61c1529ac6e9c10f1cd3843f4c1412ea 377 Pfam PF07687 Peptidase dimerisation domain 175 282 1.9E-24 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain D934_01400 61c1529ac6e9c10f1cd3843f4c1412ea 377 Gene3D G3DSA:3.30.70.360 179 292 2.0E-124 T 15-10-2018 D934_01400 61c1529ac6e9c10f1cd3843f4c1412ea 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 135 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 D934_01400 61c1529ac6e9c10f1cd3843f4c1412ea 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 5.3E-175 T 15-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 D934_13270 0356d2abc89766bdb184ecc87d45520c 95 SUPERFAMILY SSF54637 2 89 8.53E-11 T 15-10-2018 IPR029069 HotDog domain superfamily D934_13270 0356d2abc89766bdb184ecc87d45520c 95 Gene3D G3DSA:3.10.129.10 1 93 1.2E-14 T 15-10-2018 D934_06915 b936c92282c083d671070bc7fee3c769 344 Gene3D G3DSA:3.40.50.300 101 344 2.7E-103 T 15-10-2018 D934_06915 b936c92282c083d671070bc7fee3c769 344 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 3.1E-161 T 15-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 D934_06915 b936c92282c083d671070bc7fee3c769 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 15-10-2018 IPR001482 Type II/IV secretion system protein D934_06915 b936c92282c083d671070bc7fee3c769 344 SUPERFAMILY SSF52540 5 336 2.46E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_06915 b936c92282c083d671070bc7fee3c769 344 Gene3D G3DSA:3.30.450.90 1 100 2.3E-35 T 15-10-2018 D934_06915 b936c92282c083d671070bc7fee3c769 344 Pfam PF00437 Type II/IV secretion system protein 12 268 1.8E-47 T 15-10-2018 IPR001482 Type II/IV secretion system protein D934_06915 b936c92282c083d671070bc7fee3c769 344 SMART SM00382 122 262 0.0012 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 SMART SM00448 28 139 3.8E-31 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 456 473 2.5E-10 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 473 493 2.5E-10 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 SUPERFAMILY SSF46689 378 492 5.82E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 Pfam PF00072 Response regulator receiver domain 31 139 1.9E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 377 386 - T 15-10-2018 IPR025944 Sigma-54 interaction domain, conserved site D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 SUPERFAMILY SSF52540 165 405 1.04E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 188 201 - T 15-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 SUPERFAMILY SSF52172 27 208 1.39E-41 T 15-10-2018 IPR011006 CheY-like superfamily D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 SMART SM00382 184 327 8.0E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 Gene3D G3DSA:3.40.50.300 156 334 2.4E-61 T 15-10-2018 D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 Pfam PF00158 Sigma-54 interaction domain 164 330 5.2E-66 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 Gene3D G3DSA:1.10.10.60 433 493 2.7E-16 T 15-10-2018 D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 Gene3D G3DSA:3.40.50.2300 21 155 3.9E-33 T 15-10-2018 D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 Gene3D G3DSA:1.10.8.60 335 411 1.0E-20 T 15-10-2018 D934_13495 23ab6d2679a3115eb4165bab8e8b67ea 493 Pfam PF02954 Bacterial regulatory protein, Fis family 450 490 2.7E-14 T 15-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D934_04350 bbb1942aa16ddfcc8c1ed7dd5188100d 321 Pfam PF00296 Luciferase-like monooxygenase 35 254 8.2E-37 T 15-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 D934_04350 bbb1942aa16ddfcc8c1ed7dd5188100d 321 Gene3D G3DSA:3.20.20.30 25 319 1.5E-65 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 D934_04350 bbb1942aa16ddfcc8c1ed7dd5188100d 321 SUPERFAMILY SSF51679 30 317 4.06E-61 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 D934_04675 c80031dbcdfe4c9b3e5fadcbeeb0c298 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 15-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site D934_04675 c80031dbcdfe4c9b3e5fadcbeeb0c298 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.1E-28 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like D934_04675 c80031dbcdfe4c9b3e5fadcbeeb0c298 89 SUPERFAMILY SSF55594 1 88 1.83E-28 T 15-10-2018 IPR035895 HPr-like superfamily D934_04675 c80031dbcdfe4c9b3e5fadcbeeb0c298 89 Gene3D G3DSA:3.30.1340.10 1 88 2.1E-31 T 15-10-2018 IPR035895 HPr-like superfamily D934_04675 c80031dbcdfe4c9b3e5fadcbeeb0c298 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.4E-17 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like D934_04675 c80031dbcdfe4c9b3e5fadcbeeb0c298 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.4E-17 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like D934_04675 c80031dbcdfe4c9b3e5fadcbeeb0c298 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.4E-17 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like D934_04675 c80031dbcdfe4c9b3e5fadcbeeb0c298 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 15-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site D934_04675 c80031dbcdfe4c9b3e5fadcbeeb0c298 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 7.6E-34 T 15-10-2018 IPR000032 Phosphocarrier protein HPr-like D934_06370 30d771acd88039f7134a55f58618fec6 195 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 193 4.3E-63 T 15-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 D934_06370 30d771acd88039f7134a55f58618fec6 195 Gene3D G3DSA:2.40.50.230 2 87 1.1E-26 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily D934_06370 30d771acd88039f7134a55f58618fec6 195 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 118 3.0E-34 T 15-10-2018 IPR006531 Gp5 N-terminal D934_06370 30d771acd88039f7134a55f58618fec6 195 Gene3D G3DSA:2.60.220.40 90 157 3.2E-12 T 15-10-2018 D934_02135 7e1b25736cc44dab6774ea030fa85386 187 Pfam PF00406 Adenylate kinase 5 163 3.4E-53 T 15-10-2018 D934_02135 7e1b25736cc44dab6774ea030fa85386 187 PRINTS PR00094 Adenylate kinase signature 32 46 1.6E-34 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D934_02135 7e1b25736cc44dab6774ea030fa85386 187 PRINTS PR00094 Adenylate kinase signature 81 97 1.6E-34 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D934_02135 7e1b25736cc44dab6774ea030fa85386 187 PRINTS PR00094 Adenylate kinase signature 4 17 1.6E-34 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D934_02135 7e1b25736cc44dab6774ea030fa85386 187 PRINTS PR00094 Adenylate kinase signature 133 148 1.6E-34 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D934_02135 7e1b25736cc44dab6774ea030fa85386 187 PRINTS PR00094 Adenylate kinase signature 150 164 1.6E-34 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D934_02135 7e1b25736cc44dab6774ea030fa85386 187 Hamap MF_00235 Adenylate kinase [adk]. 1 186 44.239 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D934_02135 7e1b25736cc44dab6774ea030fa85386 187 Gene3D G3DSA:3.40.50.300 1 185 4.1E-61 T 15-10-2018 D934_02135 7e1b25736cc44dab6774ea030fa85386 187 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 15-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D934_02135 7e1b25736cc44dab6774ea030fa85386 187 SUPERFAMILY SSF52540 1 182 1.66E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_12000 44de27d1abf7b7486d4ba463d45d528c 302 Pfam PF04381 Putative exonuclease, RdgC 1 289 3.5E-95 T 15-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 D934_12000 44de27d1abf7b7486d4ba463d45d528c 302 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 300 41.54 T 15-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 D934_11370 0434a6b4265a7a1b689a9f416b30b005 223 Pfam PF02224 Cytidylate kinase 9 221 1.8E-66 T 15-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 D934_11370 0434a6b4265a7a1b689a9f416b30b005 223 SUPERFAMILY SSF52540 7 221 1.19E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_11370 0434a6b4265a7a1b689a9f416b30b005 223 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 5.2E-69 T 15-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 D934_11370 0434a6b4265a7a1b689a9f416b30b005 223 Gene3D G3DSA:3.40.50.300 2 223 5.4E-72 T 15-10-2018 D934_11370 0434a6b4265a7a1b689a9f416b30b005 223 Hamap MF_00238 Cytidylate kinase [cmk]. 6 222 30.054 T 15-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 D934_10705 256190b434678da73f9fa822adef33fa 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 121 1.3E-7 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D934_10705 256190b434678da73f9fa822adef33fa 127 SUPERFAMILY SSF54593 1 121 3.99E-21 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D934_10705 256190b434678da73f9fa822adef33fa 127 Gene3D G3DSA:3.10.180.10 6 127 2.3E-34 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D934_03330 073c924d2fe2bb72501bcb82e2d869d0 202 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 202 27.754 T 15-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03330 073c924d2fe2bb72501bcb82e2d869d0 202 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 14 199 2.8E-61 T 15-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03330 073c924d2fe2bb72501bcb82e2d869d0 202 SUPERFAMILY SSF52166 10 201 6.15E-58 T 15-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 D934_03330 073c924d2fe2bb72501bcb82e2d869d0 202 Pfam PF00573 Ribosomal protein L4/L1 family 13 199 1.8E-53 T 15-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 D934_03330 073c924d2fe2bb72501bcb82e2d869d0 202 Gene3D G3DSA:3.40.1370.10 7 202 3.9E-55 T 15-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 D934_00505 88f317a247aa287d427d8c8bc9a71ff7 356 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 59 316 2.2E-49 T 15-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 D934_00505 88f317a247aa287d427d8c8bc9a71ff7 356 SUPERFAMILY SSF51445 38 342 7.84E-74 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily D934_00505 88f317a247aa287d427d8c8bc9a71ff7 356 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 163 172 - T 15-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 D934_00505 88f317a247aa287d427d8c8bc9a71ff7 356 Gene3D G3DSA:3.20.20.80 38 353 2.1E-94 T 15-10-2018 D934_01755 234f2f59ffd0aab007e5f94c6ac2abc7 318 SMART SM00244 21 179 6.5E-45 T 15-10-2018 IPR001107 Band 7 domain D934_01755 234f2f59ffd0aab007e5f94c6ac2abc7 318 Pfam PF16200 C-terminal region of band_7 241 297 2.9E-9 T 15-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 D934_01755 234f2f59ffd0aab007e5f94c6ac2abc7 318 Pfam PF01145 SPFH domain / Band 7 family 25 194 3.8E-31 T 15-10-2018 IPR001107 Band 7 domain D934_01755 234f2f59ffd0aab007e5f94c6ac2abc7 318 Gene3D G3DSA:3.30.479.30 50 181 2.7E-39 T 15-10-2018 D934_01755 234f2f59ffd0aab007e5f94c6ac2abc7 318 SUPERFAMILY SSF117892 52 186 1.83E-35 T 15-10-2018 IPR036013 Band 7/SPFH domain superfamily D934_01755 234f2f59ffd0aab007e5f94c6ac2abc7 318 PRINTS PR00721 Stomatin signature 155 173 1.3E-25 T 15-10-2018 IPR001972 Stomatin family GO:0016020 D934_01755 234f2f59ffd0aab007e5f94c6ac2abc7 318 PRINTS PR00721 Stomatin signature 174 195 1.3E-25 T 15-10-2018 IPR001972 Stomatin family GO:0016020 D934_01755 234f2f59ffd0aab007e5f94c6ac2abc7 318 PRINTS PR00721 Stomatin signature 111 128 1.3E-25 T 15-10-2018 IPR001972 Stomatin family GO:0016020 D934_01755 234f2f59ffd0aab007e5f94c6ac2abc7 318 PRINTS PR00721 Stomatin signature 131 154 1.3E-25 T 15-10-2018 IPR001972 Stomatin family GO:0016020 D934_01755 234f2f59ffd0aab007e5f94c6ac2abc7 318 PRINTS PR00721 Stomatin signature 76 97 1.3E-25 T 15-10-2018 IPR001972 Stomatin family GO:0016020 D934_05980 fd0432e4f8d66633c77121c9531772a9 137 Pfam PF16137 Domain of unknown function (DUF4845) 45 125 2.5E-18 T 15-10-2018 IPR032314 Protein of unknown function DUF4845 D934_11230 dbc540d8755b8c0198bc9b2eb050b701 416 Gene3D G3DSA:3.40.50.300 5 269 2.4E-15 T 15-10-2018 D934_11230 dbc540d8755b8c0198bc9b2eb050b701 416 SUPERFAMILY SSF52540 23 258 4.89E-14 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_11230 dbc540d8755b8c0198bc9b2eb050b701 416 Pfam PF13166 AAA domain 9 335 2.7E-22 T 15-10-2018 IPR026866 Protein CR006, P-loop domain D934_03250 c4d0cf5948da38db0aaa284b18a5b915 352 Gene3D G3DSA:3.40.50.720 166 321 4.3E-124 T 15-10-2018 D934_03250 c4d0cf5948da38db0aaa284b18a5b915 352 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 178 205 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 D934_03250 c4d0cf5948da38db0aaa284b18a5b915 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 D934_03250 c4d0cf5948da38db0aaa284b18a5b915 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 143 2.7E-25 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D934_03250 c4d0cf5948da38db0aaa284b18a5b915 352 SUPERFAMILY SSF51735 148 312 2.96E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_03250 c4d0cf5948da38db0aaa284b18a5b915 352 SUPERFAMILY SSF50129 6 174 2.89E-49 T 15-10-2018 IPR011032 GroES-like superfamily D934_03250 c4d0cf5948da38db0aaa284b18a5b915 352 Pfam PF00107 Zinc-binding dehydrogenase 185 306 3.4E-17 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D934_03250 c4d0cf5948da38db0aaa284b18a5b915 352 Gene3D G3DSA:3.90.180.10 9 341 4.3E-124 T 15-10-2018 D934_05315 dbbc9a598f61ddfbc88c85fad39a072a 432 SMART SM01040 60 148 8.6E-28 T 15-10-2018 IPR003497 BRO N-terminal domain D934_05315 dbbc9a598f61ddfbc88c85fad39a072a 432 SMART SM01040 194 280 1.6E-39 T 15-10-2018 IPR003497 BRO N-terminal domain D934_05315 dbbc9a598f61ddfbc88c85fad39a072a 432 Pfam PF02498 BRO family, N-terminal domain 195 280 4.2E-23 T 15-10-2018 IPR003497 BRO N-terminal domain D934_05315 dbbc9a598f61ddfbc88c85fad39a072a 432 Pfam PF02498 BRO family, N-terminal domain 61 148 3.8E-20 T 15-10-2018 IPR003497 BRO N-terminal domain D934_03230 84b44688cec00c77fd6c64ca6e8472eb 455 Pfam PF01523 Putative modulator of DNA gyrase 39 331 3.7E-53 T 15-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 D934_03230 84b44688cec00c77fd6c64ca6e8472eb 455 Gene3D G3DSA:3.30.2290.10 9 239 7.2E-83 T 15-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal D934_03230 84b44688cec00c77fd6c64ca6e8472eb 455 SUPERFAMILY SSF111283 20 454 5.1E-116 T 15-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 D934_05955 944a3691d8b8755ea86e2786ebf7426e 206 SUPERFAMILY SSF88946 11 110 9.73E-27 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D934_05955 944a3691d8b8755ea86e2786ebf7426e 206 Pfam PF04542 Sigma-70 region 2 29 96 2.3E-17 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D934_05955 944a3691d8b8755ea86e2786ebf7426e 206 Gene3D G3DSA:1.10.1740.10 3 125 4.4E-35 T 15-10-2018 D934_05955 944a3691d8b8755ea86e2786ebf7426e 206 Gene3D G3DSA:1.10.10.10 126 194 1.3E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_05955 944a3691d8b8755ea86e2786ebf7426e 206 SUPERFAMILY SSF88659 127 186 1.0E-17 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D934_05955 944a3691d8b8755ea86e2786ebf7426e 206 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 6 194 4.8E-91 T 15-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D934_05955 944a3691d8b8755ea86e2786ebf7426e 206 Pfam PF08281 Sigma-70, region 4 134 185 1.4E-17 T 15-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D934_05955 944a3691d8b8755ea86e2786ebf7426e 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 186 4.4E-30 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D934_11675 00a1d584e2f48b5ab7c0da011a80ad9a 564 Pfam PF00245 Alkaline phosphatase 65 527 1.1E-124 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D934_11675 00a1d584e2f48b5ab7c0da011a80ad9a 564 PRINTS PR00113 Alkaline phosphatase signature 65 85 2.2E-42 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D934_11675 00a1d584e2f48b5ab7c0da011a80ad9a 564 PRINTS PR00113 Alkaline phosphatase signature 167 187 2.2E-42 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D934_11675 00a1d584e2f48b5ab7c0da011a80ad9a 564 PRINTS PR00113 Alkaline phosphatase signature 121 136 2.2E-42 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D934_11675 00a1d584e2f48b5ab7c0da011a80ad9a 564 PRINTS PR00113 Alkaline phosphatase signature 318 347 2.2E-42 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D934_11675 00a1d584e2f48b5ab7c0da011a80ad9a 564 PRINTS PR00113 Alkaline phosphatase signature 230 240 2.2E-42 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D934_11675 00a1d584e2f48b5ab7c0da011a80ad9a 564 SMART SM00098 66 531 8.0E-148 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D934_11675 00a1d584e2f48b5ab7c0da011a80ad9a 564 SUPERFAMILY SSF53649 47 528 6.98E-143 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D934_11675 00a1d584e2f48b5ab7c0da011a80ad9a 564 Gene3D G3DSA:3.40.720.10 39 544 5.7E-171 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D934_00585 aa091f9476cf5d997accf8b0ffa96c9c 793 SUPERFAMILY SSF53335 14 567 4.36E-102 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_00585 aa091f9476cf5d997accf8b0ffa96c9c 793 Gene3D G3DSA:3.40.50.150 178 508 2.7E-85 T 15-10-2018 D934_00585 aa091f9476cf5d997accf8b0ffa96c9c 793 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 314 320 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D934_00585 aa091f9476cf5d997accf8b0ffa96c9c 793 Pfam PF12161 HsdM N-terminal domain 15 150 6.6E-21 T 15-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain D934_00585 aa091f9476cf5d997accf8b0ffa96c9c 793 Pfam PF02384 N-6 DNA Methylase 176 495 4.2E-51 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 D934_00585 aa091f9476cf5d997accf8b0ffa96c9c 793 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 230 244 9.7E-11 T 15-10-2018 D934_00585 aa091f9476cf5d997accf8b0ffa96c9c 793 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 199 215 9.7E-11 T 15-10-2018 D934_00585 aa091f9476cf5d997accf8b0ffa96c9c 793 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 311 323 9.7E-11 T 15-10-2018 D934_11085 ee6029e4dde051d85231f573c437a92a 215 SUPERFAMILY SSF52016 1 203 2.94E-62 T 15-10-2018 D934_11085 ee6029e4dde051d85231f573c437a92a 215 Gene3D G3DSA:3.20.19.10 1 184 1.1E-74 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 D934_11085 ee6029e4dde051d85231f573c437a92a 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 2.3E-85 T 15-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 D934_11085 ee6029e4dde051d85231f573c437a92a 215 Pfam PF00694 Aconitase C-terminal domain 1 131 4.2E-37 T 15-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 D934_11085 ee6029e4dde051d85231f573c437a92a 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.682 T 15-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 D934_11140 5e4ce25c68da4f9557387ca62d633d1a 205 SUPERFAMILY SSF51445 4 203 3.32E-49 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily D934_11140 5e4ce25c68da4f9557387ca62d633d1a 205 Gene3D G3DSA:3.20.20.80 3 205 5.5E-51 T 15-10-2018 D934_11140 5e4ce25c68da4f9557387ca62d633d1a 205 Pfam PF01183 Glycosyl hydrolases family 25 6 194 7.9E-37 T 15-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 D934_00460 0718b22bcd16e763fe1bd5c643a9e93a 232 SMART SM00382 33 220 9.3E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_00460 0718b22bcd16e763fe1bd5c643a9e93a 232 Gene3D G3DSA:3.40.50.300 5 232 1.4E-63 T 15-10-2018 D934_00460 0718b22bcd16e763fe1bd5c643a9e93a 232 SUPERFAMILY SSF52540 7 229 9.49E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00460 0718b22bcd16e763fe1bd5c643a9e93a 232 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_00460 0718b22bcd16e763fe1bd5c643a9e93a 232 Pfam PF00005 ABC transporter 24 171 5.9E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_02860 3df5d109c1e0ce44b100e478f49d0882 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 1.4E-140 T 15-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 D934_02860 3df5d109c1e0ce44b100e478f49d0882 413 Pfam PF02687 FtsX-like permease family 300 406 1.3E-12 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 D934_02860 3df5d109c1e0ce44b100e478f49d0882 413 Pfam PF12704 MacB-like periplasmic core domain 28 212 2.2E-14 T 15-10-2018 IPR025857 MacB-like periplasmic core domain D934_09540 f19bfdf73c52d35d1626de50c5201979 206 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 48 62 1.0E-6 T 15-10-2018 D934_09540 f19bfdf73c52d35d1626de50c5201979 206 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 1.0E-6 T 15-10-2018 D934_09540 f19bfdf73c52d35d1626de50c5201979 206 PRINTS PR00097 Anthranilate synthase component II signature 102 110 3.9E-28 T 15-10-2018 D934_09540 f19bfdf73c52d35d1626de50c5201979 206 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.9E-28 T 15-10-2018 D934_09540 f19bfdf73c52d35d1626de50c5201979 206 PRINTS PR00097 Anthranilate synthase component II signature 77 88 3.9E-28 T 15-10-2018 D934_09540 f19bfdf73c52d35d1626de50c5201979 206 PRINTS PR00097 Anthranilate synthase component II signature 5 19 3.9E-28 T 15-10-2018 D934_09540 f19bfdf73c52d35d1626de50c5201979 206 PRINTS PR00097 Anthranilate synthase component II signature 51 60 3.9E-28 T 15-10-2018 D934_09540 f19bfdf73c52d35d1626de50c5201979 206 PRINTS PR00097 Anthranilate synthase component II signature 123 135 3.9E-28 T 15-10-2018 D934_09540 f19bfdf73c52d35d1626de50c5201979 206 SUPERFAMILY SSF52317 3 192 3.39E-42 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_09540 f19bfdf73c52d35d1626de50c5201979 206 Pfam PF00117 Glutamine amidotransferase class-I 7 190 6.3E-38 T 15-10-2018 IPR017926 Glutamine amidotransferase D934_09540 f19bfdf73c52d35d1626de50c5201979 206 Gene3D G3DSA:3.40.50.880 3 200 8.2E-48 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_09540 f19bfdf73c52d35d1626de50c5201979 206 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 5 191 6.6E-55 T 15-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_09540 f19bfdf73c52d35d1626de50c5201979 206 PRINTS PR00096 Glutamine amidotransferase superfamily signature 51 60 3.2E-13 T 15-10-2018 D934_09540 f19bfdf73c52d35d1626de50c5201979 206 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 3.2E-13 T 15-10-2018 D934_09540 f19bfdf73c52d35d1626de50c5201979 206 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 3.2E-13 T 15-10-2018 D934_10140 4c4caf96bbf55b6cfeb0eada0711e361 88 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 1 73 6.0E-37 T 15-10-2018 D934_10140 4c4caf96bbf55b6cfeb0eada0711e361 88 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 1 66 1.2E-11 T 15-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB D934_10140 4c4caf96bbf55b6cfeb0eada0711e361 88 PIRSF PIRSF017854 1 71 3.2E-32 T 15-10-2018 IPR016704 Conjugal transfer, TrbD D934_10040 401eff5320907d4ac4b238ea9f82ad23 354 Pfam PF13662 Toprim domain 204 275 3.3E-8 T 15-10-2018 IPR006171 TOPRIM domain D934_10040 401eff5320907d4ac4b238ea9f82ad23 354 SMART SM00493 202 280 0.0037 T 15-10-2018 IPR006171 TOPRIM domain D934_09565 2960822f195f3b82b1d2b4a9cf7980a2 92 TIGRFAM TIGR01321 TrpR: trp operon repressor 2 90 2.2E-38 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 D934_09565 2960822f195f3b82b1d2b4a9cf7980a2 92 SUPERFAMILY SSF48295 4 88 2.46E-19 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 D934_09565 2960822f195f3b82b1d2b4a9cf7980a2 92 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 7 86 9.0E-6 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 D934_09565 2960822f195f3b82b1d2b4a9cf7980a2 92 Gene3D G3DSA:1.10.1270.10 1 91 1.3E-22 T 15-10-2018 IPR038116 TrpR-like superfamily D934_09565 2960822f195f3b82b1d2b4a9cf7980a2 92 PIRSF PIRSF003196 1 92 5.6E-30 T 15-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 D934_09565 2960822f195f3b82b1d2b4a9cf7980a2 92 Pfam PF01371 Trp repressor protein 5 89 1.3E-26 T 15-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 D934_12495 02dd32e0477491d1cfda9d540baec1ce 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 311 8.3E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D934_12495 02dd32e0477491d1cfda9d540baec1ce 324 Gene3D G3DSA:1.10.3720.10 77 322 9.0E-34 T 15-10-2018 IPR035906 MetI-like superfamily D934_12495 02dd32e0477491d1cfda9d540baec1ce 324 SUPERFAMILY SSF161098 35 311 1.59E-33 T 15-10-2018 IPR035906 MetI-like superfamily D934_12495 02dd32e0477491d1cfda9d540baec1ce 324 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 25 317 1.8E-90 T 15-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 D934_00610 61cb7976f36ecd3630d38a9ab832e3ce 92 Gene3D G3DSA:3.90.220.20 6 87 9.3E-9 T 15-10-2018 D934_00610 61cb7976f36ecd3630d38a9ab832e3ce 92 SUPERFAMILY SSF116734 12 71 1.16E-6 T 15-10-2018 D934_03990 997b3eab446f1a6fcbf90efda4d791c4 276 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_03990 997b3eab446f1a6fcbf90efda4d791c4 276 SMART SM00382 44 234 3.5E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_03990 997b3eab446f1a6fcbf90efda4d791c4 276 Pfam PF00005 ABC transporter 37 186 1.6E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_03990 997b3eab446f1a6fcbf90efda4d791c4 276 SUPERFAMILY SSF52540 20 245 1.43E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_03990 997b3eab446f1a6fcbf90efda4d791c4 276 Gene3D G3DSA:3.40.50.300 17 273 3.4E-61 T 15-10-2018 D934_12720 4718387ff3447191d19664572026502c 130 Gene3D G3DSA:1.10.3510.10 7 128 2.5E-21 T 15-10-2018 IPR023138 NMB0513-like superfamily D934_12720 4718387ff3447191d19664572026502c 130 Pfam PF04591 Protein of unknown function, DUF596 61 130 3.3E-27 T 15-10-2018 IPR007670 Protein of unknown function DUF596 D934_12720 4718387ff3447191d19664572026502c 130 SUPERFAMILY SSF160472 3 123 3.79E-43 T 15-10-2018 IPR023138 NMB0513-like superfamily D934_13440 317a997123ace716a8d2f79e8d948283 301 Gene3D G3DSA:3.40.50.20 1 114 3.0E-34 T 15-10-2018 D934_13440 317a997123ace716a8d2f79e8d948283 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.6E-74 T 15-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 D934_13440 317a997123ace716a8d2f79e8d948283 301 Pfam PF08443 RimK-like ATP-grasp domain 98 285 3.3E-59 T 15-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 D934_13440 317a997123ace716a8d2f79e8d948283 301 Gene3D G3DSA:3.30.1490.20 115 180 3.3E-17 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D934_13440 317a997123ace716a8d2f79e8d948283 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 49.704 T 15-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK D934_13440 317a997123ace716a8d2f79e8d948283 301 SUPERFAMILY SSF56059 98 288 1.1E-43 T 15-10-2018 D934_13440 317a997123ace716a8d2f79e8d948283 301 Gene3D G3DSA:3.30.470.80 182 296 6.9E-38 T 15-10-2018 D934_01020 7572a61e29a0d33d62d4d7770f14ad57 191 SUPERFAMILY SSF54523 19 144 4.16E-22 T 15-10-2018 D934_01020 7572a61e29a0d33d62d4d7770f14ad57 191 Pfam PF07963 Prokaryotic N-terminal methylation motif 18 39 2.0E-4 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_01020 7572a61e29a0d33d62d4d7770f14ad57 191 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 39 5.3E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_01020 7572a61e29a0d33d62d4d7770f14ad57 191 Gene3D G3DSA:3.30.700.10 19 165 1.3E-13 T 15-10-2018 D934_01020 7572a61e29a0d33d62d4d7770f14ad57 191 Pfam PF12019 Type II transport protein GspH 55 170 5.0E-18 T 15-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 D934_05235 b7d8d801364e3e1341c1761f0095ee49 86 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 23 75 3.0E-10 T 15-10-2018 IPR031856 Putative bacterial antitoxin YdaS D934_05235 b7d8d801364e3e1341c1761f0095ee49 86 Gene3D G3DSA:1.10.260.40 18 86 1.4E-10 T 15-10-2018 D934_08385 2a814d194c10f3f3eb49f291d1d98183 273 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 2 269 5.5E-80 T 15-10-2018 IPR019276 Protein of unkown function DUF2303 D934_08760 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Pfam PF03796 DnaB-like helicase C terminal domain 207 461 1.9E-116 T 15-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 D934_08760 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Gene3D G3DSA:3.40.50.300 190 467 2.2E-108 T 15-10-2018 D934_08760 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Gene3D G3DSA:1.10.860.10 23 183 1.7E-51 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal D934_08760 5df8d370cb487a8fdf5cd9d4e9b78d84 471 SUPERFAMILY SSF48024 27 139 1.57E-36 T 15-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 D934_08760 5df8d370cb487a8fdf5cd9d4e9b78d84 471 SUPERFAMILY SSF52540 205 454 2.41E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_08760 5df8d370cb487a8fdf5cd9d4e9b78d84 471 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 29 463 7.6E-176 T 15-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 D934_08760 5df8d370cb487a8fdf5cd9d4e9b78d84 471 Pfam PF00772 DnaB-like helicase N terminal domain 29 130 4.2E-33 T 15-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 D934_09450 b68828f47536f57e4c98bcd95934c8f5 350 TIGRFAM TIGR02794 tolA_full: protein TolA 20 333 3.9E-21 T 15-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 D934_09450 b68828f47536f57e4c98bcd95934c8f5 350 Gene3D G3DSA:3.30.1150.10 190 347 2.6E-14 T 15-10-2018 D934_09450 b68828f47536f57e4c98bcd95934c8f5 350 Pfam PF13103 TonB C terminal 257 329 2.8E-8 T 15-10-2018 D934_09450 b68828f47536f57e4c98bcd95934c8f5 350 SUPERFAMILY SSF74653 234 345 2.55E-13 T 15-10-2018 D934_04890 43163f303ae1248196ebd1ba29463ea3 214 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 21 211 5.3E-15 T 15-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 D934_04890 43163f303ae1248196ebd1ba29463ea3 214 SUPERFAMILY SSF89392 30 212 2.9E-41 T 15-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX D934_04890 43163f303ae1248196ebd1ba29463ea3 214 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 14 213 29.616 T 15-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 D934_04890 43163f303ae1248196ebd1ba29463ea3 214 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 203 1.8E-48 T 15-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like D934_04890 43163f303ae1248196ebd1ba29463ea3 214 Gene3D G3DSA:2.50.20.10 26 214 3.5E-42 T 15-10-2018 D934_05680 7ac809722377468def080cddcaab0e37 280 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 279 1.8E-139 T 15-10-2018 IPR008487 Protein of unknown function DUF769 D934_08025 9628dbbb2e76b684dd2ccc0eb4f9b98e 584 SUPERFAMILY SSF161098 71 264 1.7E-20 T 15-10-2018 IPR035906 MetI-like superfamily D934_08025 9628dbbb2e76b684dd2ccc0eb4f9b98e 584 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 263 1.2E-12 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D934_08025 9628dbbb2e76b684dd2ccc0eb4f9b98e 584 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 398 566 1.6E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D934_08025 9628dbbb2e76b684dd2ccc0eb4f9b98e 584 SUPERFAMILY SSF161098 376 569 6.8E-20 T 15-10-2018 IPR035906 MetI-like superfamily D934_08025 9628dbbb2e76b684dd2ccc0eb4f9b98e 584 Gene3D G3DSA:1.10.3720.10 370 573 2.1E-18 T 15-10-2018 IPR035906 MetI-like superfamily D934_08025 9628dbbb2e76b684dd2ccc0eb4f9b98e 584 Gene3D G3DSA:1.10.3720.10 69 269 5.5E-24 T 15-10-2018 IPR035906 MetI-like superfamily D934_06120 db07f7f7e98fb2e70f99d7a14bd1b593 240 Pfam PF00535 Glycosyl transferase family 2 7 168 5.8E-24 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D934_06120 db07f7f7e98fb2e70f99d7a14bd1b593 240 Gene3D G3DSA:3.90.550.10 2 232 4.1E-31 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_06120 db07f7f7e98fb2e70f99d7a14bd1b593 240 SUPERFAMILY SSF53448 5 228 1.6E-39 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_13825 ee88fefb2caba98b7be1281133f5fe00 49 Pfam PF00239 Resolvase, N terminal domain 10 37 3.6E-5 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D934_13825 ee88fefb2caba98b7be1281133f5fe00 49 SUPERFAMILY SSF53041 8 36 2.22E-5 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 D934_13825 ee88fefb2caba98b7be1281133f5fe00 49 Gene3D G3DSA:1.20.5.40 9 37 5.6E-8 T 15-10-2018 D934_00805 5975590f3c9e9926af925c50d2541f59 129 SUPERFAMILY SSF160472 2 122 5.89E-44 T 15-10-2018 IPR023138 NMB0513-like superfamily D934_00805 5975590f3c9e9926af925c50d2541f59 129 Gene3D G3DSA:1.10.3510.10 2 128 7.9E-22 T 15-10-2018 IPR023138 NMB0513-like superfamily D934_00805 5975590f3c9e9926af925c50d2541f59 129 Pfam PF04591 Protein of unknown function, DUF596 60 129 3.4E-26 T 15-10-2018 IPR007670 Protein of unknown function DUF596 D934_01865 2bbc0b93865c4b2d907ad960cc49abbe 264 Gene3D G3DSA:3.20.20.70 1 263 3.9E-104 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_01865 2bbc0b93865c4b2d907ad960cc49abbe 264 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 15-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 D934_01865 2bbc0b93865c4b2d907ad960cc49abbe 264 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 36.171 T 15-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 D934_01865 2bbc0b93865c4b2d907ad960cc49abbe 264 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 259 7.4E-95 T 15-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 D934_01865 2bbc0b93865c4b2d907ad960cc49abbe 264 SUPERFAMILY SSF51366 12 262 9.77E-90 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D934_12490 8e4d0acb341a12772a3aed83e38d0552 364 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 53 361 9.9E-123 T 15-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 D934_12490 8e4d0acb341a12772a3aed83e38d0552 364 Pfam PF12849 PBP superfamily domain 45 332 3.7E-60 T 15-10-2018 IPR024370 PBP domain D934_12490 8e4d0acb341a12772a3aed83e38d0552 364 Gene3D G3DSA:3.40.190.10 127 303 5.4E-126 T 15-10-2018 D934_12490 8e4d0acb341a12772a3aed83e38d0552 364 Gene3D G3DSA:3.40.190.10 54 350 5.4E-126 T 15-10-2018 D934_12490 8e4d0acb341a12772a3aed83e38d0552 364 PIRSF PIRSF002756 4 362 2.2E-107 T 15-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 D934_12490 8e4d0acb341a12772a3aed83e38d0552 364 SUPERFAMILY SSF53850 53 360 1.14E-97 T 15-10-2018 D934_05330 90a2c4724a0d42860e0cfa05223a8d7a 108 Pfam PF07798 Protein of unknown function (DUF1640) 6 62 6.0E-6 T 15-10-2018 IPR024461 Coiled-coil domain-containing protein 90-like D934_09510 cc8a08ee51fad704a18a9a3ee7f78a0b 157 SUPERFAMILY SSF117070 11 129 1.22E-6 T 15-10-2018 D934_03525 5c67e34263ea789621c777bcd18ebca1 655 SUPERFAMILY SSF109998 70 311 1.29E-16 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily D934_03525 5c67e34263ea789621c777bcd18ebca1 655 Pfam PF13623 SurA N-terminal domain 2 157 7.4E-21 T 15-10-2018 D934_03525 5c67e34263ea789621c777bcd18ebca1 655 Pfam PF13616 PPIC-type PPIASE domain 279 387 8.1E-29 T 15-10-2018 D934_03525 5c67e34263ea789621c777bcd18ebca1 655 SUPERFAMILY SSF54534 284 388 1.83E-30 T 15-10-2018 D934_03525 5c67e34263ea789621c777bcd18ebca1 655 Gene3D G3DSA:3.10.50.40 278 410 2.7E-36 T 15-10-2018 D934_03525 5c67e34263ea789621c777bcd18ebca1 655 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 325 346 - T 15-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 D934_10450 af37095e5d8ddd51b325c767610dfbe4 281 Gene3D G3DSA:1.10.40.60 90 193 7.0E-19 T 15-10-2018 IPR038072 GspK, central domain superfamily D934_10450 af37095e5d8ddd51b325c767610dfbe4 281 PIRSF PIRSF002786 1 277 1.9E-40 T 15-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 D934_10450 af37095e5d8ddd51b325c767610dfbe4 281 SUPERFAMILY SSF158544 96 192 2.88E-25 T 15-10-2018 IPR038072 GspK, central domain superfamily D934_10450 af37095e5d8ddd51b325c767610dfbe4 281 Pfam PF03934 Type II secretion system (T2SS), protein K 31 262 7.6E-46 T 15-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 D934_06480 7a3a404eeb9857cc6c592f56a94a1d6d 308 Pfam PF03837 RecT family 19 206 4.5E-24 T 15-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 D934_06480 7a3a404eeb9857cc6c592f56a94a1d6d 308 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 6 203 4.9E-70 T 15-10-2018 IPR010183 Bacteriophage lambda, Bet D934_11425 91099f97ee1a978ba4503a1f4a22a67c 94 Pfam PF01722 BolA-like protein 16 87 1.7E-24 T 15-10-2018 IPR002634 BolA protein D934_11425 91099f97ee1a978ba4503a1f4a22a67c 94 Gene3D G3DSA:3.30.300.90 5 93 9.8E-25 T 15-10-2018 D934_11425 91099f97ee1a978ba4503a1f4a22a67c 94 SUPERFAMILY SSF82657 8 88 4.19E-21 T 15-10-2018 IPR036065 BolA-like superfamily D934_11425 91099f97ee1a978ba4503a1f4a22a67c 94 PIRSF PIRSF003113 2 94 1.6E-22 T 15-10-2018 IPR002634 BolA protein D934_02480 710da97c55d6f6fd3de79fd850b0c56e 92 SMART SM01234 5 72 9.1E-36 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor D934_02480 710da97c55d6f6fd3de79fd850b0c56e 92 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 9 78 5.1E-26 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor D934_02480 710da97c55d6f6fd3de79fd850b0c56e 92 Pfam PF01809 Haemolytic domain 9 72 2.4E-26 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor D934_02480 710da97c55d6f6fd3de79fd850b0c56e 92 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 21 72 2.0E-24 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor D934_02480 710da97c55d6f6fd3de79fd850b0c56e 92 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 5 73 23.582 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor D934_01935 6b57aa52b73db991b28ff79fbc8a2ada 272 SUPERFAMILY SSF51621 10 270 2.47E-98 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D934_01935 6b57aa52b73db991b28ff79fbc8a2ada 272 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 270 40.842 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 D934_01935 6b57aa52b73db991b28ff79fbc8a2ada 272 Pfam PF02548 Ketopantoate hydroxymethyltransferase 11 265 2.5E-102 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 D934_01935 6b57aa52b73db991b28ff79fbc8a2ada 272 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 16 270 2.5E-97 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 D934_01935 6b57aa52b73db991b28ff79fbc8a2ada 272 Gene3D G3DSA:3.20.20.60 9 272 2.2E-100 T 15-10-2018 D934_01935 6b57aa52b73db991b28ff79fbc8a2ada 272 PIRSF PIRSF000388 1 272 6.1E-95 T 15-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 D934_03550 a239bbdd0684f4464d7fa9f247d77912 160 SUPERFAMILY SSF52218 1 151 7.47E-25 T 15-10-2018 IPR029039 Flavoprotein-like superfamily D934_03550 a239bbdd0684f4464d7fa9f247d77912 160 TIGRFAM TIGR01754 flav_RNR: putative ribonucleotide reductase-associated flavodoxin 1 144 2.6E-71 T 15-10-2018 IPR010088 Ribonucleotide reductase-associated flavodoxin, putative D934_03550 a239bbdd0684f4464d7fa9f247d77912 160 Pfam PF00258 Flavodoxin 8 121 3.1E-7 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 D934_03550 a239bbdd0684f4464d7fa9f247d77912 160 Gene3D G3DSA:3.40.50.360 2 147 4.2E-16 T 15-10-2018 IPR029039 Flavoprotein-like superfamily D934_08310 3d5c2a099cc30a40874d1de01ebc76e3 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 2.1E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_08310 3d5c2a099cc30a40874d1de01ebc76e3 170 Gene3D G3DSA:3.30.700.10 8 170 2.6E-14 T 15-10-2018 D934_08310 3d5c2a099cc30a40874d1de01ebc76e3 170 SUPERFAMILY SSF54523 8 147 4.63E-20 T 15-10-2018 D934_08310 3d5c2a099cc30a40874d1de01ebc76e3 170 Pfam PF12019 Type II transport protein GspH 44 160 6.7E-17 T 15-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 D934_08310 3d5c2a099cc30a40874d1de01ebc76e3 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 28 2.5E-7 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_05350 fa72029bf98552e61cacfad7a88894fb 300 Pfam PF00589 Phage integrase family 119 264 4.7E-12 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D934_05350 fa72029bf98552e61cacfad7a88894fb 300 SUPERFAMILY SSF56349 11 273 1.18E-33 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D934_05350 fa72029bf98552e61cacfad7a88894fb 300 Gene3D G3DSA:1.10.150.130 7 99 4.6E-6 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal D934_05350 fa72029bf98552e61cacfad7a88894fb 300 Gene3D G3DSA:1.10.443.10 111 286 6.7E-23 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D934_11610 f7fd39cb6aca0fdabfab49361f35214f 317 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 9 296 6.3E-96 T 15-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 D934_11610 f7fd39cb6aca0fdabfab49361f35214f 317 PIRSF PIRSF000446 7 314 4.1E-99 T 15-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 D934_11610 f7fd39cb6aca0fdabfab49361f35214f 317 SUPERFAMILY SSF52151 8 312 1.6E-73 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D934_11610 f7fd39cb6aca0fdabfab49361f35214f 317 SUPERFAMILY SSF55048 135 202 3.66E-15 T 15-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding D934_11610 f7fd39cb6aca0fdabfab49361f35214f 317 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 12 311 4.5E-36 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain D934_11610 f7fd39cb6aca0fdabfab49361f35214f 317 Pfam PF00698 Acyl transferase domain 11 283 2.4E-39 T 15-10-2018 IPR014043 Acyl transferase D934_11610 f7fd39cb6aca0fdabfab49361f35214f 317 Gene3D G3DSA:3.30.70.250 130 202 6.7E-95 T 15-10-2018 D934_11610 f7fd39cb6aca0fdabfab49361f35214f 317 Gene3D G3DSA:3.40.366.10 11 291 6.7E-95 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 D934_09900 5d27feb9d69709575e8af4e6f5da941e 291 Gene3D G3DSA:3.90.550.10 5 193 1.8E-23 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_09900 5d27feb9d69709575e8af4e6f5da941e 291 Pfam PF00535 Glycosyl transferase family 2 21 103 8.8E-15 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D934_09900 5d27feb9d69709575e8af4e6f5da941e 291 SUPERFAMILY SSF53448 20 167 2.95E-24 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_09865 bd5e32aa50b42b14e72188fff11c2d7f 249 Pfam PF00588 SpoU rRNA Methylase family 100 239 4.7E-38 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 D934_09865 bd5e32aa50b42b14e72188fff11c2d7f 249 Gene3D G3DSA:3.40.1280.10 81 247 2.5E-57 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D934_09865 bd5e32aa50b42b14e72188fff11c2d7f 249 SUPERFAMILY SSF75217 75 247 2.22E-47 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases D934_09865 bd5e32aa50b42b14e72188fff11c2d7f 249 Gene3D G3DSA:3.30.1330.30 1 78 1.9E-15 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like D934_09865 bd5e32aa50b42b14e72188fff11c2d7f 249 SMART SM00967 7 83 1.2E-12 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 D934_09865 bd5e32aa50b42b14e72188fff11c2d7f 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 6 246 1.1E-69 T 15-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 D934_09865 bd5e32aa50b42b14e72188fff11c2d7f 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 5 247 39.408 T 15-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB D934_09865 bd5e32aa50b42b14e72188fff11c2d7f 249 SUPERFAMILY SSF55315 1 76 4.24E-14 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like D934_09865 bd5e32aa50b42b14e72188fff11c2d7f 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 81 6.1E-12 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 D934_11890 7a6c348d2053932b322446041f061329 175 Pfam PF10029 Predicted periplasmic protein (DUF2271) 22 162 3.4E-50 T 15-10-2018 IPR014469 Protein of unknown function DUF2271 D934_11890 7a6c348d2053932b322446041f061329 175 PIRSF PIRSF014995 1 171 7.0E-74 T 15-10-2018 IPR014469 Protein of unknown function DUF2271 D934_03120 95075a70ef739bbcb8504f1fe3bcf0f7 306 Gene3D G3DSA:3.30.70.2130 150 206 1.0E-5 T 15-10-2018 D934_03120 95075a70ef739bbcb8504f1fe3bcf0f7 306 PIRSF PIRSF015283 3 306 1.5E-97 T 15-10-2018 IPR016631 Regulatory, RpfE D934_05430 f320c67695b58eac0d301fe8d3f552fd 377 Pfam PF00925 GTP cyclohydrolase II 209 362 3.9E-25 T 15-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D934_05430 f320c67695b58eac0d301fe8d3f552fd 377 SUPERFAMILY SSF142695 205 364 3.14E-36 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D934_05430 f320c67695b58eac0d301fe8d3f552fd 377 PIRSF PIRSF001259 2 369 8.2E-109 T 15-10-2018 D934_05430 f320c67695b58eac0d301fe8d3f552fd 377 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 10 200 1.5E-68 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D934_05430 f320c67695b58eac0d301fe8d3f552fd 377 Gene3D G3DSA:3.90.870.10 1 207 6.0E-84 T 15-10-2018 D934_05430 f320c67695b58eac0d301fe8d3f552fd 377 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 11 199 2.0E-81 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D934_05430 f320c67695b58eac0d301fe8d3f552fd 377 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 204 37.264 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D934_05430 f320c67695b58eac0d301fe8d3f552fd 377 SUPERFAMILY SSF55821 6 203 5.72E-82 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily D934_10200 37cc7ab14b67f547f1a11e7c65b4c15d 211 Gene3D G3DSA:2.160.10.10 18 207 2.2E-46 T 15-10-2018 D934_10200 37cc7ab14b67f547f1a11e7c65b4c15d 211 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 112 140 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D934_10200 37cc7ab14b67f547f1a11e7c65b4c15d 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 38 69 1.0E-4 T 15-10-2018 IPR001451 Hexapeptide repeat D934_10200 37cc7ab14b67f547f1a11e7c65b4c15d 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 104 136 3.1E-6 T 15-10-2018 IPR001451 Hexapeptide repeat D934_10200 37cc7ab14b67f547f1a11e7c65b4c15d 211 SUPERFAMILY SSF51161 25 164 1.21E-29 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily D934_10800 95f1853187ff522d5e8d6be42fa4393b 106 Pfam PF16509 TrfB plasmid transcriptional repressor 7 92 9.4E-30 T 15-10-2018 IPR032428 TrfB transcriptional repressor protein D934_10800 95f1853187ff522d5e8d6be42fa4393b 106 Gene3D G3DSA:1.10.10.2690 4 105 1.8E-31 T 15-10-2018 D934_10800 95f1853187ff522d5e8d6be42fa4393b 106 SUPERFAMILY SSF88659 10 63 4.49E-5 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D934_04795 3a72e3e8d5662ac44defb37a75e50d75 219 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 24 209 1.1E-72 T 15-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 D934_04795 3a72e3e8d5662ac44defb37a75e50d75 219 Pfam PF01926 50S ribosome-binding GTPase 43 161 8.4E-20 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 D934_04795 3a72e3e8d5662ac44defb37a75e50d75 219 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 29 213 28.016 T 15-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 D934_04795 3a72e3e8d5662ac44defb37a75e50d75 219 Gene3D G3DSA:3.40.50.300 20 216 1.9E-53 T 15-10-2018 D934_04795 3a72e3e8d5662ac44defb37a75e50d75 219 SUPERFAMILY SSF52540 34 213 2.42E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_11010 096265b34846daaeb959ca02c72e5fd0 335 Gene3D G3DSA:3.20.20.300 1 326 2.4E-106 T 15-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 D934_11010 096265b34846daaeb959ca02c72e5fd0 335 SUPERFAMILY SSF51445 1 290 5.69E-79 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily D934_11010 096265b34846daaeb959ca02c72e5fd0 335 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 3 287 6.5E-76 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D934_11010 096265b34846daaeb959ca02c72e5fd0 335 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 233 250 - T 15-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 D934_11010 096265b34846daaeb959ca02c72e5fd0 335 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 332 44.594 T 15-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 D934_03380 d5cc8c105bfcfe8442a7b1823d2850c8 179 PIRSF PIRSF002161 1 179 1.9E-62 T 15-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03380 d5cc8c105bfcfe8442a7b1823d2850c8 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 41.989 T 15-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03380 d5cc8c105bfcfe8442a7b1823d2850c8 179 SUPERFAMILY SSF55282 3 179 3.06E-74 T 15-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03380 d5cc8c105bfcfe8442a7b1823d2850c8 179 Gene3D G3DSA:3.30.1440.10 1 179 2.1E-74 T 15-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03380 d5cc8c105bfcfe8442a7b1823d2850c8 179 Pfam PF00281 Ribosomal protein L5 24 80 1.4E-26 T 15-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03380 d5cc8c105bfcfe8442a7b1823d2850c8 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 15-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_03380 d5cc8c105bfcfe8442a7b1823d2850c8 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.2E-37 T 15-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_12710 de785b9c82a4252c9f659a94025f92c0 127 Pfam PF04591 Protein of unknown function, DUF596 56 118 1.4E-24 T 15-10-2018 IPR007670 Protein of unknown function DUF596 D934_12710 de785b9c82a4252c9f659a94025f92c0 127 SUPERFAMILY SSF160472 1 119 1.57E-37 T 15-10-2018 IPR023138 NMB0513-like superfamily D934_12710 de785b9c82a4252c9f659a94025f92c0 127 Gene3D G3DSA:1.10.3510.10 2 126 1.3E-14 T 15-10-2018 IPR023138 NMB0513-like superfamily D934_13750 013f2129605d8d06b1c9f421fc64737a 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 331 5.0E-12 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal D934_13750 013f2129605d8d06b1c9f421fc64737a 402 Pfam PF07282 Putative transposase DNA-binding domain 304 371 9.6E-25 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal D934_13750 013f2129605d8d06b1c9f421fc64737a 402 Pfam PF12323 Helix-turn-helix domain 1 48 4.8E-15 T 15-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain D934_13750 013f2129605d8d06b1c9f421fc64737a 402 Pfam PF01385 Probable transposase 163 275 2.0E-28 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 D934_03210 68b5e3283f0a209e98835f3000d86f62 1277 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 15 1266 2.2E-286 T 15-10-2018 IPR011836 Conserved hypothetical protein CHP02099 D934_03210 68b5e3283f0a209e98835f3000d86f62 1277 Pfam PF13116 Protein of unknown function 510 786 7.9E-36 T 15-10-2018 IPR025263 Domain of unknown function DUF3971 D934_03210 68b5e3283f0a209e98835f3000d86f62 1277 Pfam PF13502 AsmA-like C-terminal region 1014 1256 3.8E-58 T 15-10-2018 IPR032712 AsmA-like, C-terminal D934_13895 2d143bf933b29722876f9fb0269240a1 770 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 126 330 8.4E-23 T 15-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 D934_13895 2d143bf933b29722876f9fb0269240a1 770 SUPERFAMILY SSF52540 331 663 1.71E-28 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_09575 120cde26aa97a1d8e95c630e8c028804 333 Hamap MF_00568 Quinolinate synthase A [nadA]. 37 333 43.701 T 15-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 D934_09575 120cde26aa97a1d8e95c630e8c028804 333 SUPERFAMILY SSF142754 40 332 5.62E-110 T 15-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 D934_09575 120cde26aa97a1d8e95c630e8c028804 333 Pfam PF02445 Quinolinate synthetase A protein 42 332 1.7E-112 T 15-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 D934_09575 120cde26aa97a1d8e95c630e8c028804 333 Gene3D G3DSA:3.40.50.10800 122 331 1.2E-111 T 15-10-2018 D934_09575 120cde26aa97a1d8e95c630e8c028804 333 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 40 333 6.2E-97 T 15-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 D934_09575 120cde26aa97a1d8e95c630e8c028804 333 Gene3D G3DSA:3.40.50.10800 42 314 1.2E-111 T 15-10-2018 D934_09575 120cde26aa97a1d8e95c630e8c028804 333 Gene3D G3DSA:3.40.50.10800 205 289 1.2E-111 T 15-10-2018 D934_02055 67d333c89a8a1d9cf5559cfc0945a006 353 SUPERFAMILY SSF51735 5 338 6.92E-87 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_02055 67d333c89a8a1d9cf5559cfc0945a006 353 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 6 339 1.1E-151 T 15-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 D934_02055 67d333c89a8a1d9cf5559cfc0945a006 353 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 323 6.7E-90 T 15-10-2018 IPR016040 NAD(P)-binding domain D934_02055 67d333c89a8a1d9cf5559cfc0945a006 353 Gene3D G3DSA:3.40.50.720 6 324 1.5E-119 T 15-10-2018 D934_02055 67d333c89a8a1d9cf5559cfc0945a006 353 Gene3D G3DSA:3.90.25.10 202 332 1.5E-119 T 15-10-2018 D934_01570 780020146947014ed56e7dfa8353fb3b 409 SUPERFAMILY SSF52507 10 184 3.14E-57 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 D934_01570 780020146947014ed56e7dfa8353fb3b 409 Pfam PF02441 Flavoprotein 14 185 5.3E-43 T 15-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 D934_01570 780020146947014ed56e7dfa8353fb3b 409 Gene3D G3DSA:3.40.50.1950 7 190 2.9E-55 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 D934_01570 780020146947014ed56e7dfa8353fb3b 409 Gene3D G3DSA:3.40.50.10300 196 409 5.1E-71 T 15-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 D934_01570 780020146947014ed56e7dfa8353fb3b 409 SUPERFAMILY SSF102645 196 408 7.19E-70 T 15-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 D934_01570 780020146947014ed56e7dfa8353fb3b 409 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 198 377 5.2E-66 T 15-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 D934_01570 780020146947014ed56e7dfa8353fb3b 409 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 10 403 1.1E-133 T 15-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 D934_13740 c76e7638fc28b31293d69e0922dc8102 108 Gene3D G3DSA:2.30.30.110 1 107 1.7E-34 T 15-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor D934_13740 c76e7638fc28b31293d69e0922dc8102 108 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 102 4.4E-21 T 15-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 D934_13740 c76e7638fc28b31293d69e0922dc8102 108 SUPERFAMILY SSF50118 1 107 5.01E-27 T 15-10-2018 D934_08810 2ef43988d89bf24492b4113b27522988 176 PIRSF PIRSF016481 3 176 1.1E-73 T 15-10-2018 IPR007446 Pilus assembly protein PilP D934_08810 2ef43988d89bf24492b4113b27522988 176 Gene3D G3DSA:2.30.30.830 82 174 1.0E-30 T 15-10-2018 D934_08810 2ef43988d89bf24492b4113b27522988 176 Pfam PF04351 Pilus assembly protein, PilP 34 173 4.2E-47 T 15-10-2018 IPR007446 Pilus assembly protein PilP D934_03235 8c65359c4272d77f9dee250415076910 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.9E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D934_03235 8c65359c4272d77f9dee250415076910 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.9E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D934_03235 8c65359c4272d77f9dee250415076910 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.9E-5 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D934_03235 8c65359c4272d77f9dee250415076910 301 SUPERFAMILY SSF46785 7 86 8.04E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_03235 8c65359c4272d77f9dee250415076910 301 Gene3D G3DSA:3.40.190.10 165 266 1.0E-55 T 15-10-2018 D934_03235 8c65359c4272d77f9dee250415076910 301 Pfam PF03466 LysR substrate binding domain 89 295 1.7E-41 T 15-10-2018 IPR005119 LysR, substrate-binding D934_03235 8c65359c4272d77f9dee250415076910 301 Gene3D G3DSA:1.10.10.10 4 91 3.4E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_03235 8c65359c4272d77f9dee250415076910 301 SUPERFAMILY SSF53850 90 298 9.23E-42 T 15-10-2018 D934_03235 8c65359c4272d77f9dee250415076910 301 Gene3D G3DSA:3.40.190.10 93 291 1.0E-55 T 15-10-2018 D934_03235 8c65359c4272d77f9dee250415076910 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 6.1E-16 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D934_01695 782e2b5c92821fa60af672f4f2d455ea 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 193 2.4E-6 T 15-10-2018 D934_01695 782e2b5c92821fa60af672f4f2d455ea 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 245 6.3E-52 T 15-10-2018 D934_01695 782e2b5c92821fa60af672f4f2d455ea 246 Gene3D G3DSA:3.40.50.720 8 246 8.1E-72 T 15-10-2018 D934_01695 782e2b5c92821fa60af672f4f2d455ea 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.2E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_01695 782e2b5c92821fa60af672f4f2d455ea 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.2E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_01695 782e2b5c92821fa60af672f4f2d455ea 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.2E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_01695 782e2b5c92821fa60af672f4f2d455ea 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.2E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_01695 782e2b5c92821fa60af672f4f2d455ea 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.2E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_01695 782e2b5c92821fa60af672f4f2d455ea 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.2E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_01695 782e2b5c92821fa60af672f4f2d455ea 246 SUPERFAMILY SSF51735 11 245 2.19E-69 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_01695 782e2b5c92821fa60af672f4f2d455ea 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 5.0E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_01695 782e2b5c92821fa60af672f4f2d455ea 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 5.0E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_01695 782e2b5c92821fa60af672f4f2d455ea 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.0E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_03035 a3e94b31647bac775279964bcbcba010 652 SUPERFAMILY SSF56024 43 257 1.55E-37 T 15-10-2018 D934_03035 a3e94b31647bac775279964bcbcba010 652 Pfam PF13091 PLD-like domain 336 547 4.1E-12 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 D934_03035 a3e94b31647bac775279964bcbcba010 652 Pfam PF13091 PLD-like domain 90 245 3.0E-17 T 15-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 D934_03035 a3e94b31647bac775279964bcbcba010 652 SUPERFAMILY SSF56024 312 564 2.94E-26 T 15-10-2018 D934_03035 a3e94b31647bac775279964bcbcba010 652 Gene3D G3DSA:3.30.870.10 458 553 2.6E-11 T 15-10-2018 D934_03035 a3e94b31647bac775279964bcbcba010 652 Gene3D G3DSA:3.30.870.10 302 414 2.0E-7 T 15-10-2018 D934_03035 a3e94b31647bac775279964bcbcba010 652 Gene3D G3DSA:3.30.870.10 74 260 3.5E-38 T 15-10-2018 D934_03035 a3e94b31647bac775279964bcbcba010 652 SMART SM00155 186 213 0.018 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 D934_03035 a3e94b31647bac775279964bcbcba010 652 SMART SM00155 497 524 0.038 T 15-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 D934_00420 7b7607a275af062aa6ffb853f5d82316 453 Pfam PF01554 MatE 23 181 8.6E-21 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D934_00420 7b7607a275af062aa6ffb853f5d82316 453 Pfam PF01554 MatE 249 408 2.6E-28 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D934_00420 7b7607a275af062aa6ffb853f5d82316 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 423 5.8E-77 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D934_06930 3998627e1be764be964785cdbb9b088d 294 Gene3D G3DSA:3.90.550.10 11 242 1.5E-32 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_06930 3998627e1be764be964785cdbb9b088d 294 SUPERFAMILY SSF53448 20 264 9.01E-40 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_06930 3998627e1be764be964785cdbb9b088d 294 Pfam PF00535 Glycosyl transferase family 2 22 157 9.3E-19 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D934_06880 d212eaf667c415c843ebbe74870b3125 224 Pfam PF02230 Phospholipase/Carboxylesterase 14 217 1.3E-42 T 15-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 D934_06880 d212eaf667c415c843ebbe74870b3125 224 SUPERFAMILY SSF53474 13 219 3.57E-44 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_06880 d212eaf667c415c843ebbe74870b3125 224 Gene3D G3DSA:3.40.50.1820 3 220 6.4E-57 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_00080 7c8c28e4cc99fd44d43c0522eb9f5699 199 SUPERFAMILY SSF89360 1 89 4.51E-15 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D934_00080 7c8c28e4cc99fd44d43c0522eb9f5699 199 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 193 36.551 T 15-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 D934_00080 7c8c28e4cc99fd44d43c0522eb9f5699 199 Gene3D G3DSA:2.60.300.12 1 100 9.7E-8 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D934_00080 7c8c28e4cc99fd44d43c0522eb9f5699 199 Pfam PF01106 NifU-like domain 116 179 5.0E-20 T 15-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 D934_00080 7c8c28e4cc99fd44d43c0522eb9f5699 199 SUPERFAMILY SSF117916 105 186 5.45E-22 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily D934_00080 7c8c28e4cc99fd44d43c0522eb9f5699 199 Gene3D G3DSA:3.30.300.130 104 188 1.3E-21 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily D934_00080 7c8c28e4cc99fd44d43c0522eb9f5699 199 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 120 179 6.0E-28 T 15-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 D934_10180 76e330d064c241866a348bdc6f9f3772 1663 PIRSF PIRSF036761 1 1663 0.0 T 15-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 D934_10180 76e330d064c241866a348bdc6f9f3772 1663 SUPERFAMILY SSF53223 811 997 2.01E-20 T 15-10-2018 D934_10180 76e330d064c241866a348bdc6f9f3772 1663 SUPERFAMILY SSF51735 1001 1339 2.03E-28 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_10180 76e330d064c241866a348bdc6f9f3772 1663 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 99 1656 0.0 T 15-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 D934_10180 76e330d064c241866a348bdc6f9f3772 1663 Pfam PF12466 Glutamate dehydrogenase N terminal 1 95 1.4E-46 T 15-10-2018 IPR024727 Bacterial NAD-glutamate dehydrogenase, N-terminal D934_01555 8377d409f159927696f69c9940a6e5e6 248 Pfam PF05036 Sporulation related domain 173 245 3.4E-15 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 D934_01555 8377d409f159927696f69c9940a6e5e6 248 SUPERFAMILY SSF110997 172 246 9.02E-17 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D934_01555 8377d409f159927696f69c9940a6e5e6 248 Gene3D G3DSA:3.30.70.1070 168 247 9.1E-18 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D934_04725 dd8e56030be150174ab49fad68ecf89e 345 Gene3D G3DSA:3.10.580.10 217 342 3.2E-46 T 15-10-2018 D934_04725 dd8e56030be150174ab49fad68ecf89e 345 Pfam PF01380 SIS domain 62 193 2.3E-28 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D934_04725 dd8e56030be150174ab49fad68ecf89e 345 Pfam PF00571 CBS domain 223 279 7.6E-9 T 15-10-2018 IPR000644 CBS domain D934_04725 dd8e56030be150174ab49fad68ecf89e 345 Pfam PF00571 CBS domain 291 342 5.5E-7 T 15-10-2018 IPR000644 CBS domain D934_04725 dd8e56030be150174ab49fad68ecf89e 345 SUPERFAMILY SSF53697 32 342 2.22E-68 T 15-10-2018 D934_04725 dd8e56030be150174ab49fad68ecf89e 345 Gene3D G3DSA:3.40.50.10490 24 216 1.1E-59 T 15-10-2018 D934_04725 dd8e56030be150174ab49fad68ecf89e 345 PIRSF PIRSF004692 16 345 4.1E-134 T 15-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 D934_04725 dd8e56030be150174ab49fad68ecf89e 345 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 66 335 2.4E-112 T 15-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 D934_04725 dd8e56030be150174ab49fad68ecf89e 345 SMART SM00116 296 344 4.4E-4 T 15-10-2018 IPR000644 CBS domain D934_04725 dd8e56030be150174ab49fad68ecf89e 345 SMART SM00116 231 279 5.2E-5 T 15-10-2018 IPR000644 CBS domain D934_06995 3b8acd4a76b6adce0e648f79b950d2f1 92 Gene3D G3DSA:3.40.1350.10 5 92 6.6E-30 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 D934_06995 3b8acd4a76b6adce0e648f79b950d2f1 92 Pfam PF08774 VRR-NUC domain 31 82 7.3E-7 T 15-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 D934_06995 3b8acd4a76b6adce0e648f79b950d2f1 92 SMART SM00990 5 85 3.1E-18 T 15-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 D934_10660 8c969cebbf1ed9f4231fd0099712041b 243 Pfam PF01555 DNA methylase 28 151 2.5E-11 T 15-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 D934_10660 8c969cebbf1ed9f4231fd0099712041b 243 Pfam PF01555 DNA methylase 176 236 9.9E-16 T 15-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 D934_10660 8c969cebbf1ed9f4231fd0099712041b 243 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 31 37 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D934_10660 8c969cebbf1ed9f4231fd0099712041b 243 Gene3D G3DSA:3.40.50.150 7 159 1.5E-24 T 15-10-2018 D934_10660 8c969cebbf1ed9f4231fd0099712041b 243 Gene3D G3DSA:3.40.50.150 160 243 1.4E-20 T 15-10-2018 D934_10660 8c969cebbf1ed9f4231fd0099712041b 243 SUPERFAMILY SSF53335 10 239 2.89E-50 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_10660 8c969cebbf1ed9f4231fd0099712041b 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 220 240 1.2E-27 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 D934_10660 8c969cebbf1ed9f4231fd0099712041b 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 27 41 1.2E-27 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 D934_10660 8c969cebbf1ed9f4231fd0099712041b 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 179 196 1.2E-27 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 D934_10660 8c969cebbf1ed9f4231fd0099712041b 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 84 104 1.2E-27 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 D934_10660 8c969cebbf1ed9f4231fd0099712041b 243 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 197 215 1.2E-27 T 15-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 D934_01035 2f8338122060e2f6554bcf460ce1ef13 195 Pfam PF14341 PilX N-terminal 12 62 3.4E-14 T 15-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain D934_01035 2f8338122060e2f6554bcf460ce1ef13 195 Pfam PF13681 Type IV pilus assembly protein PilX C-term 89 193 2.2E-10 T 15-10-2018 IPR025205 PilX/PilW C-terminal domain D934_11875 07ef76c05b4f57d47a8c8ef5e404adc7 759 Gene3D G3DSA:2.170.130.10 53 180 1.2E-34 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D934_11875 07ef76c05b4f57d47a8c8ef5e404adc7 759 Gene3D G3DSA:2.40.170.20 185 759 1.4E-109 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D934_11875 07ef76c05b4f57d47a8c8ef5e404adc7 759 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 171 1.8E-15 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain D934_11875 07ef76c05b4f57d47a8c8ef5e404adc7 759 Pfam PF00593 TonB dependent receptor 272 757 2.2E-47 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D934_11875 07ef76c05b4f57d47a8c8ef5e404adc7 759 SUPERFAMILY SSF56935 33 759 1.23E-110 T 15-10-2018 D934_11875 07ef76c05b4f57d47a8c8ef5e404adc7 759 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 759 1.1E-68 T 15-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 D934_12375 53dd24e4271f79fcefcc3204b4a95590 99 PIRSF PIRSF028744 1 99 2.3E-37 T 15-10-2018 IPR014056 Addiction module killer protein, predicted D934_12375 53dd24e4271f79fcefcc3204b4a95590 99 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 96 4.2E-38 T 15-10-2018 IPR014056 Addiction module killer protein, predicted D934_12375 53dd24e4271f79fcefcc3204b4a95590 99 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 95 2.5E-6 T 15-10-2018 IPR009241 Toxin HigB-like D934_11665 d8ba44c97ae501d02ca20f146c024a83 437 SUPERFAMILY SSF82829 231 313 4.19E-18 T 15-10-2018 D934_11665 d8ba44c97ae501d02ca20f146c024a83 437 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 356 402 2.0E-15 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D934_11665 d8ba44c97ae501d02ca20f146c024a83 437 Gene3D G3DSA:1.20.59.20 230 312 7.4E-15 T 15-10-2018 D934_11665 d8ba44c97ae501d02ca20f146c024a83 437 Pfam PF09179 TilS substrate binding domain 242 309 1.2E-13 T 15-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D934_11665 d8ba44c97ae501d02ca20f146c024a83 437 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 301 21.2 T 15-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D934_11665 d8ba44c97ae501d02ca20f146c024a83 437 SMART SM00977 356 429 7.2E-20 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D934_11665 d8ba44c97ae501d02ca20f146c024a83 437 Gene3D G3DSA:3.40.50.620 9 226 1.4E-63 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_11665 d8ba44c97ae501d02ca20f146c024a83 437 SUPERFAMILY SSF56037 317 430 4.97E-25 T 15-10-2018 D934_11665 d8ba44c97ae501d02ca20f146c024a83 437 Pfam PF01171 PP-loop family 17 192 1.3E-58 T 15-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 D934_11665 d8ba44c97ae501d02ca20f146c024a83 437 SUPERFAMILY SSF52402 13 224 6.4E-54 T 15-10-2018 D934_11665 d8ba44c97ae501d02ca20f146c024a83 437 Pfam PF11734 TilS substrate C-terminal domain 356 429 2.6E-19 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D934_11665 d8ba44c97ae501d02ca20f146c024a83 437 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 17 197 2.8E-49 T 15-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D934_07300 3743f18efe12b093c0fc332add730fa4 146 Pfam PF00581 Rhodanese-like domain 44 136 4.7E-17 T 15-10-2018 IPR001763 Rhodanese-like domain D934_07300 3743f18efe12b093c0fc332add730fa4 146 SUPERFAMILY SSF52821 21 144 4.71E-26 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily D934_07300 3743f18efe12b093c0fc332add730fa4 146 SMART SM00450 42 140 2.8E-17 T 15-10-2018 IPR001763 Rhodanese-like domain D934_07300 3743f18efe12b093c0fc332add730fa4 146 Gene3D G3DSA:3.40.250.10 40 145 2.9E-23 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily D934_03615 95ace1cfe613e18dc62257135f3cfc8f 164 SUPERFAMILY SSF50891 4 136 9.64E-57 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily D934_03615 95ace1cfe613e18dc62257135f3cfc8f 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 7 133 8.4E-49 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D934_03615 95ace1cfe613e18dc62257135f3cfc8f 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 39 56 - T 15-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 D934_03615 95ace1cfe613e18dc62257135f3cfc8f 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 2.2E-35 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D934_03615 95ace1cfe613e18dc62257135f3cfc8f 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 111 126 2.2E-35 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D934_03615 95ace1cfe613e18dc62257135f3cfc8f 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 98 2.2E-35 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D934_03615 95ace1cfe613e18dc62257135f3cfc8f 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 56 2.2E-35 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D934_03615 95ace1cfe613e18dc62257135f3cfc8f 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 110 2.2E-35 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D934_03615 95ace1cfe613e18dc62257135f3cfc8f 164 Gene3D G3DSA:2.40.100.10 3 144 1.6E-59 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily D934_03615 95ace1cfe613e18dc62257135f3cfc8f 164 PIRSF PIRSF001467 2 152 7.7E-55 T 15-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 D934_01515 725d9deebd3dba6f251a9a4b9bc17141 368 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 8 366 1.8E-105 T 15-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 D934_01515 725d9deebd3dba6f251a9a4b9bc17141 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 365 1.4E-67 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 D934_10900 182abd90c2016f0871d4df83e8ad819b 248 Gene3D G3DSA:3.40.50.300 1 245 1.4E-65 T 15-10-2018 D934_10900 182abd90c2016f0871d4df83e8ad819b 248 Pfam PF00005 ABC transporter 22 165 2.5E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_10900 182abd90c2016f0871d4df83e8ad819b 248 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_10900 182abd90c2016f0871d4df83e8ad819b 248 SUPERFAMILY SSF52540 2 226 3.02E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_10900 182abd90c2016f0871d4df83e8ad819b 248 SMART SM00382 30 221 2.9E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_11695 a12de5f73e6e58716c40397c9e06711c 209 Pfam PF00877 NlpC/P60 family 99 206 2.9E-29 T 15-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain D934_11695 a12de5f73e6e58716c40397c9e06711c 209 Gene3D G3DSA:3.90.1720.10 60 203 6.8E-41 T 15-10-2018 D934_11695 a12de5f73e6e58716c40397c9e06711c 209 SUPERFAMILY SSF54001 76 208 6.38E-42 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily D934_02870 7281e514885c04276e37e2b96dd4b2f4 836 Pfam PF13567 Domain of unknown function (DUF4131) 69 226 1.9E-24 T 15-10-2018 IPR025405 Domain of unknown function DUF4131 D934_02870 7281e514885c04276e37e2b96dd4b2f4 836 Pfam PF00753 Metallo-beta-lactamase superfamily 565 729 2.4E-12 T 15-10-2018 IPR001279 Metallo-beta-lactamase D934_02870 7281e514885c04276e37e2b96dd4b2f4 836 SUPERFAMILY SSF56281 556 792 2.36E-45 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D934_02870 7281e514885c04276e37e2b96dd4b2f4 836 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 181 781 9.1E-106 T 15-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 D934_02870 7281e514885c04276e37e2b96dd4b2f4 836 Gene3D G3DSA:3.60.15.10 557 792 2.8E-50 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D934_02870 7281e514885c04276e37e2b96dd4b2f4 836 SMART SM00849 568 753 3.6E-14 T 15-10-2018 IPR001279 Metallo-beta-lactamase D934_02870 7281e514885c04276e37e2b96dd4b2f4 836 Pfam PF03772 Competence protein 264 531 5.3E-65 T 15-10-2018 IPR004477 ComEC/Rec2-related protein D934_02870 7281e514885c04276e37e2b96dd4b2f4 836 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 286 462 4.0E-26 T 15-10-2018 IPR004477 ComEC/Rec2-related protein D934_00380 8fe40c4fff6ffdeeecca99595894edd5 89 Gene3D G3DSA:2.20.25.10 8 89 8.5E-31 T 15-10-2018 D934_00380 8fe40c4fff6ffdeeecca99595894edd5 89 SUPERFAMILY SSF158997 1 78 7.85E-7 T 15-10-2018 D934_00380 8fe40c4fff6ffdeeecca99595894edd5 89 Pfam PF03966 Trm112p-like protein 2 68 7.7E-9 T 15-10-2018 IPR005651 Trm112-like D934_01240 e7700b22fb82418064a7094ad7c6828e 354 Gene3D G3DSA:2.60.40.1090 207 354 1.6E-31 T 15-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 D934_01240 e7700b22fb82418064a7094ad7c6828e 354 SUPERFAMILY SSF49401 202 354 2.24E-26 T 15-10-2018 IPR008966 Adhesion domain superfamily D934_01240 e7700b22fb82418064a7094ad7c6828e 354 Gene3D G3DSA:2.60.40.3310 37 206 3.3E-42 T 15-10-2018 D934_01240 e7700b22fb82418064a7094ad7c6828e 354 Pfam PF00419 Fimbrial protein 201 354 2.9E-19 T 15-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 D934_11495 7d8548f0a8094ae7954646469b17fb6d 144 Pfam PF03918 Cytochrome C biogenesis protein 24 133 5.2E-42 T 15-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family D934_11495 7d8548f0a8094ae7954646469b17fb6d 144 Gene3D G3DSA:1.10.8.640 26 108 1.7E-29 T 15-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily D934_09390 4f0cf3e1564ce085903e74c45d49b66f 214 SMART SM00855 2 158 2.2E-21 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D934_09390 4f0cf3e1564ce085903e74c45d49b66f 214 PIRSF PIRSF000709 1 187 2.7E-11 T 15-10-2018 D934_09390 4f0cf3e1564ce085903e74c45d49b66f 214 Gene3D G3DSA:3.40.50.1240 1 212 6.2E-55 T 15-10-2018 IPR029033 Histidine phosphatase superfamily D934_09390 4f0cf3e1564ce085903e74c45d49b66f 214 SUPERFAMILY SSF53254 1 203 1.31E-54 T 15-10-2018 IPR029033 Histidine phosphatase superfamily D934_09390 4f0cf3e1564ce085903e74c45d49b66f 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 198 2.9E-56 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D934_09390 4f0cf3e1564ce085903e74c45d49b66f 214 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 15-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 D934_12480 2c51c51d37da79b0b48cc9b43bafaf58 788 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 169 8.3E-24 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain D934_12480 2c51c51d37da79b0b48cc9b43bafaf58 788 Pfam PF00593 TonB dependent receptor 280 770 6.9E-44 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D934_12480 2c51c51d37da79b0b48cc9b43bafaf58 788 SUPERFAMILY SSF56935 36 788 3.66E-96 T 15-10-2018 D934_12480 2c51c51d37da79b0b48cc9b43bafaf58 788 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 15-10-2018 IPR010916 TonB box, conserved site D934_12480 2c51c51d37da79b0b48cc9b43bafaf58 788 Gene3D G3DSA:2.40.170.20 176 762 4.8E-53 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D934_12480 2c51c51d37da79b0b48cc9b43bafaf58 788 Gene3D G3DSA:2.170.130.10 29 173 7.6E-36 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D934_02165 0675f382ca0c95bd9886bd8f3d2da793 369 Pfam PF01594 AI-2E family transporter 34 356 4.2E-43 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like D934_12425 1ce3fc2cda2779187570b4230242bdd0 199 SUPERFAMILY SSF56672 25 197 5.67E-21 T 15-10-2018 D934_04385 15b87b71a394d1893bfa699ab6a158d0 340 Gene3D G3DSA:1.10.150.130 62 161 1.9E-7 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal D934_04385 15b87b71a394d1893bfa699ab6a158d0 340 SUPERFAMILY SSF56349 62 332 9.03E-40 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D934_04385 15b87b71a394d1893bfa699ab6a158d0 340 Gene3D G3DSA:1.10.443.10 164 335 4.5E-23 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D934_04385 15b87b71a394d1893bfa699ab6a158d0 340 Pfam PF00589 Phage integrase family 174 331 9.4E-9 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D934_12830 aafc01f2df3d7d670682298520f62cee 675 Gene3D G3DSA:3.40.50.300 466 652 1.9E-32 T 15-10-2018 D934_12830 aafc01f2df3d7d670682298520f62cee 675 Gene3D G3DSA:3.40.50.300 26 290 1.9E-42 T 15-10-2018 D934_12830 aafc01f2df3d7d670682298520f62cee 675 SMART SM00491 492 620 7.2E-35 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 D934_12830 aafc01f2df3d7d670682298520f62cee 675 SUPERFAMILY SSF52540 20 616 3.65E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_12830 aafc01f2df3d7d670682298520f62cee 675 Pfam PF13307 Helicase C-terminal domain 477 632 3.3E-31 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 D934_12165 845ef9b89319a45f75d45db522c3b7a4 351 SUPERFAMILY SSF57783 6 86 1.87E-30 T 15-10-2018 D934_12165 845ef9b89319a45f75d45db522c3b7a4 351 SMART SM00400 32 86 1.4E-27 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D934_12165 845ef9b89319a45f75d45db522c3b7a4 351 Gene3D G3DSA:3.90.580.10 2 95 2.7E-32 T 15-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 D934_12165 845ef9b89319a45f75d45db522c3b7a4 351 Pfam PF01807 CHC2 zinc finger 6 87 3.9E-32 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D934_05840 8124cfc5a7b158ee6d5dbc144e33b442 200 Gene3D G3DSA:3.40.50.880 1 200 2.6E-62 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_05840 8124cfc5a7b158ee6d5dbc144e33b442 200 PRINTS PR00097 Anthranilate synthase component II signature 73 84 6.3E-5 T 15-10-2018 D934_05840 8124cfc5a7b158ee6d5dbc144e33b442 200 PRINTS PR00097 Anthranilate synthase component II signature 42 51 6.3E-5 T 15-10-2018 D934_05840 8124cfc5a7b158ee6d5dbc144e33b442 200 PRINTS PR00097 Anthranilate synthase component II signature 175 188 6.3E-5 T 15-10-2018 D934_05840 8124cfc5a7b158ee6d5dbc144e33b442 200 SUPERFAMILY SSF52317 4 197 3.4E-46 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_05840 8124cfc5a7b158ee6d5dbc144e33b442 200 Pfam PF00117 Glutamine amidotransferase class-I 6 195 9.7E-18 T 15-10-2018 IPR017926 Glutamine amidotransferase D934_05840 8124cfc5a7b158ee6d5dbc144e33b442 200 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 197 9.8E-68 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 D934_05840 8124cfc5a7b158ee6d5dbc144e33b442 200 PIRSF PIRSF000495 2 200 6.5E-62 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 D934_05840 8124cfc5a7b158ee6d5dbc144e33b442 200 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 197 32.681 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 D934_03325 344adf6a1cec2c2fd20e20a171d26f56 210 SUPERFAMILY SSF50447 1 209 6.27E-75 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D934_03325 344adf6a1cec2c2fd20e20a171d26f56 210 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 15-10-2018 IPR019926 Ribosomal protein L3, conserved site D934_03325 344adf6a1cec2c2fd20e20a171d26f56 210 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 2 205 5.5E-84 T 15-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03325 344adf6a1cec2c2fd20e20a171d26f56 210 Pfam PF00297 Ribosomal protein L3 100 183 1.0E-13 T 15-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03325 344adf6a1cec2c2fd20e20a171d26f56 210 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 208 37.878 T 15-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03325 344adf6a1cec2c2fd20e20a171d26f56 210 Gene3D G3DSA:2.40.50.620 31 95 2.5E-15 T 15-10-2018 D934_03325 344adf6a1cec2c2fd20e20a171d26f56 210 Gene3D G3DSA:2.40.30.10 130 210 1.5E-14 T 15-10-2018 D934_11770 854174d490eb17135db031035826a1a9 282 Gene3D G3DSA:3.40.50.720 102 242 9.9E-74 T 15-10-2018 D934_11770 854174d490eb17135db031035826a1a9 282 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 192 7.3E-10 T 15-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase D934_11770 854174d490eb17135db031035826a1a9 282 Gene3D G3DSA:3.40.50.10860 6 263 9.9E-74 T 15-10-2018 D934_11770 854174d490eb17135db031035826a1a9 282 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 6 274 1.6E-70 T 15-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 D934_11770 854174d490eb17135db031035826a1a9 282 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 8 90 6.5E-26 T 15-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 D934_11770 854174d490eb17135db031035826a1a9 282 SUPERFAMILY SSF53223 4 102 5.18E-30 T 15-10-2018 D934_11770 854174d490eb17135db031035826a1a9 282 SUPERFAMILY SSF51735 103 273 4.35E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_11770 854174d490eb17135db031035826a1a9 282 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 3 274 31.682 T 15-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 D934_09420 143c6f90b8f5edf7f3a26134ba95aa66 262 Hamap MF_00801 Endonuclease V [nfi]. 39 254 34.109 T 15-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 D934_09420 143c6f90b8f5edf7f3a26134ba95aa66 262 Gene3D G3DSA:3.30.2170.10 28 257 6.6E-74 T 15-10-2018 D934_09420 143c6f90b8f5edf7f3a26134ba95aa66 262 Pfam PF04493 Endonuclease V 49 245 5.6E-68 T 15-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 D934_04405 099c16f568de8357ffab06030c195e20 92 Gene3D G3DSA:3.40.1350.10 5 92 3.5E-30 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 D934_04405 099c16f568de8357ffab06030c195e20 92 Pfam PF08774 VRR-NUC domain 31 82 2.9E-7 T 15-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 D934_04405 099c16f568de8357ffab06030c195e20 92 SMART SM00990 5 85 2.0E-17 T 15-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 D934_02720 461f3db6929d94d7de575ebc0593e541 444 SUPERFAMILY SSF50156 222 300 3.29E-11 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 D934_02720 461f3db6929d94d7de575ebc0593e541 444 Pfam PF02163 Peptidase family M50 11 432 1.0E-76 T 15-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 D934_02720 461f3db6929d94d7de575ebc0593e541 444 Gene3D G3DSA:2.30.42.10 221 303 1.1E-11 T 15-10-2018 D934_02720 461f3db6929d94d7de575ebc0593e541 444 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 443 1.7E-101 T 15-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 D934_02720 461f3db6929d94d7de575ebc0593e541 444 Gene3D G3DSA:2.30.42.10 133 216 8.2E-9 T 15-10-2018 D934_02720 461f3db6929d94d7de575ebc0593e541 444 SUPERFAMILY SSF50156 88 182 5.92E-11 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 D934_02720 461f3db6929d94d7de575ebc0593e541 444 SMART SM00228 209 279 0.0035 T 15-10-2018 IPR001478 PDZ domain GO:0005515 D934_02720 461f3db6929d94d7de575ebc0593e541 444 SMART SM00228 116 185 0.29 T 15-10-2018 IPR001478 PDZ domain GO:0005515 D934_09885 ff445e99ce51b413f8d8e941db31dffe 398 SUPERFAMILY SSF142695 186 342 2.22E-46 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D934_09885 ff445e99ce51b413f8d8e941db31dffe 398 PIRSF PIRSF001259 1 375 1.1E-108 T 15-10-2018 D934_09885 ff445e99ce51b413f8d8e941db31dffe 398 Pfam PF00925 GTP cyclohydrolase II 178 341 3.5E-49 T 15-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D934_09885 ff445e99ce51b413f8d8e941db31dffe 398 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 171 367 39.394 T 15-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D934_09885 ff445e99ce51b413f8d8e941db31dffe 398 Gene3D G3DSA:3.40.50.10990 173 344 3.9E-55 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D934_00650 c7cb07b526a7cba2679368c2b262e43a 1143 Pfam PF13555 P-loop containing region of AAA domain 22 82 2.2E-23 T 15-10-2018 D934_00650 c7cb07b526a7cba2679368c2b262e43a 1143 Pfam PF13558 Putative exonuclease SbcCD, C subunit 992 1082 5.8E-22 T 15-10-2018 D934_00650 c7cb07b526a7cba2679368c2b262e43a 1143 Gene3D G3DSA:3.40.1140.10 18 207 3.6E-6 T 15-10-2018 D934_00650 c7cb07b526a7cba2679368c2b262e43a 1143 SUPERFAMILY SSF52540 40 1093 5.33E-8 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_04340 a7ee2d635be9add06755fe17ab6c6f40 268 SUPERFAMILY SSF51366 1 243 1.33E-83 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D934_04340 a7ee2d635be9add06755fe17ab6c6f40 268 Pfam PF00290 Tryptophan synthase alpha chain 8 246 2.9E-82 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D934_04340 a7ee2d635be9add06755fe17ab6c6f40 268 Gene3D G3DSA:3.20.20.70 1 268 8.0E-95 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_04340 a7ee2d635be9add06755fe17ab6c6f40 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 245 9.9E-71 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D934_04340 a7ee2d635be9add06755fe17ab6c6f40 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 15-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D934_04340 a7ee2d635be9add06755fe17ab6c6f40 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 263 33.879 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D934_10505 8c1a6addec30ea5cd3785b8050b2c9dd 150 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 74 127 5.5E-9 T 15-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 D934_10505 8c1a6addec30ea5cd3785b8050b2c9dd 150 SUPERFAMILY SSF51197 9 127 2.75E-18 T 15-10-2018 D934_10505 8c1a6addec30ea5cd3785b8050b2c9dd 150 Gene3D G3DSA:3.60.130.10 4 130 2.7E-21 T 15-10-2018 D934_11025 965a549a92c64bedf15d1f6a4425ec90 237 Pfam PF01627 Hpt domain 162 235 4.0E-8 T 15-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D934_11025 965a549a92c64bedf15d1f6a4425ec90 237 SUPERFAMILY SSF47226 104 223 4.71E-11 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 D934_11025 965a549a92c64bedf15d1f6a4425ec90 237 Gene3D G3DSA:3.40.50.2300 3 131 9.5E-21 T 15-10-2018 D934_11025 965a549a92c64bedf15d1f6a4425ec90 237 Pfam PF00072 Response regulator receiver domain 13 118 4.8E-14 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_11025 965a549a92c64bedf15d1f6a4425ec90 237 SUPERFAMILY SSF52172 10 130 5.41E-24 T 15-10-2018 IPR011006 CheY-like superfamily D934_11025 965a549a92c64bedf15d1f6a4425ec90 237 SMART SM00448 10 118 1.7E-10 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_11025 965a549a92c64bedf15d1f6a4425ec90 237 Gene3D G3DSA:1.20.120.160 141 237 1.0E-14 T 15-10-2018 IPR036641 HPT domain superfamily GO:0000160 D934_02120 71cac022f6bfe353ed1ac83c2aeb7c61 191 Gene3D G3DSA:3.15.10.40 56 184 4.8E-7 T 15-10-2018 D934_02120 71cac022f6bfe353ed1ac83c2aeb7c61 191 Pfam PF07273 Protein of unknown function (DUF1439) 58 156 1.3E-8 T 15-10-2018 IPR010835 Protein of unknown function DUF1439 D934_04665 d4e6ad46f5678c1303ea0dc2e1a89695 94 SMART SM00924 5 88 1.5E-10 T 15-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain D934_04665 d4e6ad46f5678c1303ea0dc2e1a89695 94 SUPERFAMILY SSF158791 2 83 2.35E-16 T 15-10-2018 D934_04665 d4e6ad46f5678c1303ea0dc2e1a89695 94 Pfam PF03448 MgtE intracellular N domain 6 83 2.0E-15 T 15-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain D934_04665 d4e6ad46f5678c1303ea0dc2e1a89695 94 Gene3D G3DSA:1.25.60.10 1 92 6.5E-10 T 15-10-2018 IPR038076 MgtE, N-terminal domain superfamily D934_01310 611cd99c03d401648f6f712510bac9fa 213 Pfam PF01728 FtsJ-like methyltransferase 29 203 1.5E-49 T 15-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 D934_01310 611cd99c03d401648f6f712510bac9fa 213 SUPERFAMILY SSF53335 3 204 9.47E-39 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_01310 611cd99c03d401648f6f712510bac9fa 213 Gene3D G3DSA:3.40.50.150 28 211 5.3E-52 T 15-10-2018 D934_01310 611cd99c03d401648f6f712510bac9fa 213 PIRSF PIRSF005461 1 212 9.6E-70 T 15-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 D934_01310 611cd99c03d401648f6f712510bac9fa 213 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 205 26.383 T 15-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 D934_01370 5d5861519a1247d213e8893030daf564 261 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 261 102.456 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D934_01370 5d5861519a1247d213e8893030daf564 261 PIRSF PIRSF000386 1 256 3.1E-88 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D934_01370 5d5861519a1247d213e8893030daf564 261 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 229 1.6E-81 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D934_01370 5d5861519a1247d213e8893030daf564 261 Gene3D G3DSA:3.40.1280.10 1 165 4.8E-60 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D934_01370 5d5861519a1247d213e8893030daf564 261 Gene3D G3DSA:1.10.1270.20 166 257 4.1E-27 T 15-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D934_01370 5d5861519a1247d213e8893030daf564 261 SUPERFAMILY SSF75217 1 249 1.44E-92 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases D934_01370 5d5861519a1247d213e8893030daf564 261 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 3.8E-52 T 15-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D934_03835 cf86ad40faa68152fa6b52f6021cdf23 165 Pfam PF06853 Protein of unknown function (DUF1249) 31 145 4.9E-23 T 15-10-2018 IPR009659 Protein of unknown function DUF1249 D934_12455 f98f2ef1d0aa99357fcf234360c7e528 339 Gene3D G3DSA:1.10.443.10 169 335 2.1E-29 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D934_12455 f98f2ef1d0aa99357fcf234360c7e528 339 SUPERFAMILY SSF56349 65 329 6.77E-49 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D934_12455 f98f2ef1d0aa99357fcf234360c7e528 339 Pfam PF00589 Phage integrase family 175 330 2.5E-15 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D934_12455 f98f2ef1d0aa99357fcf234360c7e528 339 Gene3D G3DSA:1.10.150.130 63 167 3.6E-7 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal D934_04920 e6fe3dae27b746a8489b9b68695d866a 245 SUPERFAMILY SSF51735 6 244 2.5E-69 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_04920 e6fe3dae27b746a8489b9b68695d866a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.5E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_04920 e6fe3dae27b746a8489b9b68695d866a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.5E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_04920 e6fe3dae27b746a8489b9b68695d866a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.5E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_04920 e6fe3dae27b746a8489b9b68695d866a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.9E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_04920 e6fe3dae27b746a8489b9b68695d866a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_04920 e6fe3dae27b746a8489b9b68695d866a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.9E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_04920 e6fe3dae27b746a8489b9b68695d866a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.9E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_04920 e6fe3dae27b746a8489b9b68695d866a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.9E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_04920 e6fe3dae27b746a8489b9b68695d866a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.9E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D934_04920 e6fe3dae27b746a8489b9b68695d866a 245 Gene3D G3DSA:3.40.50.720 3 245 2.8E-69 T 15-10-2018 D934_04920 e6fe3dae27b746a8489b9b68695d866a 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 1.6E-50 T 15-10-2018 D934_04920 e6fe3dae27b746a8489b9b68695d866a 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D934_08215 f9a8ad85b60f680d3156f93860ba90ce 334 Gene3D G3DSA:3.40.50.720 134 300 2.5E-97 T 15-10-2018 D934_08215 f9a8ad85b60f680d3156f93860ba90ce 334 Pfam PF00107 Zinc-binding dehydrogenase 167 278 1.7E-7 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D934_08215 f9a8ad85b60f680d3156f93860ba90ce 334 SUPERFAMILY SSF50129 11 150 3.96E-36 T 15-10-2018 IPR011032 GroES-like superfamily D934_08215 f9a8ad85b60f680d3156f93860ba90ce 334 SMART SM00829 24 331 1.5E-5 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D934_08215 f9a8ad85b60f680d3156f93860ba90ce 334 Gene3D G3DSA:3.90.180.10 26 332 2.5E-97 T 15-10-2018 D934_08215 f9a8ad85b60f680d3156f93860ba90ce 334 SUPERFAMILY SSF51735 124 300 8.91E-26 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_08215 f9a8ad85b60f680d3156f93860ba90ce 334 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 12 333 4.2E-119 T 15-10-2018 IPR014188 Acrylyl-CoA reductase AcuI D934_01340 f29463a0913b114f8f6f40d8aac78af3 443 Pfam PF04932 O-Antigen ligase 221 373 4.2E-20 T 15-10-2018 IPR007016 O-antigen ligase-related D934_04285 8c44b51c97f13640553feb8719d8ae09 293 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 8 280 44.189 T 15-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 D934_04285 8c44b51c97f13640553feb8719d8ae09 293 Pfam PF02666 Phosphatidylserine decarboxylase 61 277 7.7E-52 T 15-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 D934_04285 8c44b51c97f13640553feb8719d8ae09 293 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 47 278 1.2E-62 T 15-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 D934_13650 e80f89f830ff3cabb2e5c9ec428f524b 405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 400 2.8E-10 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_13650 e80f89f830ff3cabb2e5c9ec428f524b 405 SUPERFAMILY SSF47384 197 239 3.34E-5 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D934_13650 e80f89f830ff3cabb2e5c9ec428f524b 405 SUPERFAMILY SSF55874 268 399 7.07E-18 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_13650 e80f89f830ff3cabb2e5c9ec428f524b 405 Gene3D G3DSA:3.30.565.10 260 404 5.3E-16 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_13650 e80f89f830ff3cabb2e5c9ec428f524b 405 Gene3D G3DSA:1.10.287.130 176 259 5.4E-6 T 15-10-2018 D934_13650 e80f89f830ff3cabb2e5c9ec428f524b 405 SMART SM00387 293 401 1.5E-8 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D934_05390 73e5187be740205064692d5000747474 43 Pfam PF13638 PIN domain 8 42 1.0E-14 T 15-10-2018 IPR002716 PIN domain D934_05390 73e5187be740205064692d5000747474 43 Gene3D G3DSA:3.40.50.1010 2 43 1.5E-8 T 15-10-2018 D934_05390 73e5187be740205064692d5000747474 43 SUPERFAMILY SSF88723 6 42 7.85E-7 T 15-10-2018 IPR029060 PIN-like domain superfamily D934_12575 20354f355bf8648f99fab7795913ed48 216 PIRSF PIRSF028445 1 216 4.1E-125 T 15-10-2018 IPR016885 Uncharacterised conserved protein UCP028445 D934_12575 20354f355bf8648f99fab7795913ed48 216 SUPERFAMILY SSF53335 63 176 8.8E-15 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_12575 20354f355bf8648f99fab7795913ed48 216 Gene3D G3DSA:3.40.50.150 59 171 1.5E-7 T 15-10-2018 D934_10610 70bfe63a1792220357264503e76ab6d1 281 Pfam PF13369 Transglutaminase-like superfamily 50 197 1.3E-45 T 15-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 D934_10610 70bfe63a1792220357264503e76ab6d1 281 Pfam PF13371 Tetratricopeptide repeat 199 270 8.4E-22 T 15-10-2018 D934_10610 70bfe63a1792220357264503e76ab6d1 281 SUPERFAMILY SSF48452 192 267 3.59E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_10610 70bfe63a1792220357264503e76ab6d1 281 Gene3D G3DSA:1.25.40.10 153 269 2.9E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_10610 70bfe63a1792220357264503e76ab6d1 281 SMART SM00028 227 260 0.95 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_10610 70bfe63a1792220357264503e76ab6d1 281 SMART SM00028 193 226 62.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D934_04445 06992b79ee6bf317dcab22d0feecadfe 156 Pfam PF07603 Protein of unknown function (DUF1566) 29 140 1.7E-16 T 15-10-2018 IPR011460 Protein of unknown function DUF1566 D934_04150 43b81939702a9fe1cfa3a624a81a5807 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 7 349 9.2E-128 T 15-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D934_04150 43b81939702a9fe1cfa3a624a81a5807 354 SUPERFAMILY SSF51726 1 353 2.27E-111 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D934_04150 43b81939702a9fe1cfa3a624a81a5807 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 20 29 - T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D934_04150 43b81939702a9fe1cfa3a624a81a5807 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 350 3.7E-137 T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D934_04150 43b81939702a9fe1cfa3a624a81a5807 354 Gene3D G3DSA:3.20.20.210 1 354 1.8E-147 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D934_04150 43b81939702a9fe1cfa3a624a81a5807 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 4 352 49.605 T 15-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D934_04150 43b81939702a9fe1cfa3a624a81a5807 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D934_02450 e59ca63c1d491e49b2891123a71d596a 139 Gene3D G3DSA:3.30.70.20 47 126 7.6E-30 T 15-10-2018 D934_02450 e59ca63c1d491e49b2891123a71d596a 139 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 54 65 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D934_02450 e59ca63c1d491e49b2891123a71d596a 139 Pfam PF00037 4Fe-4S binding domain 52 70 9.2E-5 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D934_02450 e59ca63c1d491e49b2891123a71d596a 139 SUPERFAMILY SSF54862 52 111 9.02E-18 T 15-10-2018 D934_13255 773825cda82bafcb2a025628318381d9 801 SUPERFAMILY SSF82866 236 405 1.96E-19 T 15-10-2018 D934_13255 773825cda82bafcb2a025628318381d9 801 Pfam PF03176 MMPL family 220 431 5.8E-8 T 15-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 D934_13255 773825cda82bafcb2a025628318381d9 801 Gene3D G3DSA:1.20.1640.10 224 411 5.3E-6 T 15-10-2018 D934_13255 773825cda82bafcb2a025628318381d9 801 SUPERFAMILY SSF82866 641 783 6.67E-15 T 15-10-2018 D934_13090 8213fb28cd62c84dcc1487b900cfa2cc 169 Gene3D G3DSA:3.30.1490.190 105 163 1.3E-14 T 15-10-2018 D934_13090 8213fb28cd62c84dcc1487b900cfa2cc 169 Gene3D G3DSA:1.10.10.10 14 102 1.1E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_13090 8213fb28cd62c84dcc1487b900cfa2cc 169 Pfam PF01475 Ferric uptake regulator family 30 152 6.2E-11 T 15-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 D934_13090 8213fb28cd62c84dcc1487b900cfa2cc 169 SUPERFAMILY SSF46785 25 157 9.92E-27 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_00065 95064cfdf0553d5ce43b07e9141cc366 433 SUPERFAMILY SSF53649 27 398 6.38E-82 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D934_00065 95064cfdf0553d5ce43b07e9141cc366 433 Gene3D G3DSA:3.30.1360.180 253 355 1.0E-118 T 15-10-2018 D934_00065 95064cfdf0553d5ce43b07e9141cc366 433 Gene3D G3DSA:3.40.720.10 40 406 1.0E-118 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D934_00065 95064cfdf0553d5ce43b07e9141cc366 433 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 40 354 1.2E-71 T 15-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 D934_03975 9ea4ba6d98b47dccaed94ad5af8c2a45 208 Gene3D G3DSA:2.60.120.590 22 208 1.2E-58 T 15-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily D934_03975 9ea4ba6d98b47dccaed94ad5af8c2a45 208 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 30 204 7.0E-32 T 15-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like D934_03975 9ea4ba6d98b47dccaed94ad5af8c2a45 208 SUPERFAMILY SSF51197 21 206 9.34E-59 T 15-10-2018 D934_02195 9d7f2e14945e2b56f01b5fa19d503384 569 Gene3D G3DSA:3.30.300.310 461 562 3.5E-29 T 15-10-2018 D934_02195 9d7f2e14945e2b56f01b5fa19d503384 569 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 548 1.1E-16 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D934_02195 9d7f2e14945e2b56f01b5fa19d503384 569 Gene3D G3DSA:3.40.50.12780 16 456 3.3E-117 T 15-10-2018 D934_02195 9d7f2e14945e2b56f01b5fa19d503384 569 Pfam PF00501 AMP-binding enzyme 39 465 4.0E-109 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D934_02195 9d7f2e14945e2b56f01b5fa19d503384 569 SUPERFAMILY SSF56801 23 558 5.76E-147 T 15-10-2018 D934_02195 9d7f2e14945e2b56f01b5fa19d503384 569 ProSitePatterns PS00455 Putative AMP-binding domain signature. 213 224 - T 15-10-2018 IPR020845 AMP-binding, conserved site D934_03875 60a03ab870b8e739b3a11623e085e65d 267 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 123 207 2.1E-12 T 15-10-2018 IPR032030 YscD, cytoplasmic domain D934_03875 60a03ab870b8e739b3a11623e085e65d 267 SUPERFAMILY SSF49879 115 207 3.52E-16 T 15-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 D934_03875 60a03ab870b8e739b3a11623e085e65d 267 Gene3D G3DSA:2.60.200.20 97 208 2.3E-16 T 15-10-2018 D934_04800 668729f7b702cdd3eb7a24c59ef76bd6 50 SUPERFAMILY SSF46626 7 44 1.13E-5 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D934_05480 1d5adfee90a24db84a3de64dc78b1c9f 260 SUPERFAMILY SSF64438 7 258 5.86E-73 T 15-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic D934_05480 1d5adfee90a24db84a3de64dc78b1c9f 260 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 31 258 8.9E-52 T 15-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase D934_05480 1d5adfee90a24db84a3de64dc78b1c9f 260 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 25 257 3.8E-69 T 15-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase D934_05480 1d5adfee90a24db84a3de64dc78b1c9f 260 Gene3D G3DSA:3.60.140.10 2 259 6.6E-77 T 15-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily D934_03580 dac1d0162979520d9df683a11bd00c6b 185 Pfam PF07209 Protein of unknown function (DUF1415) 11 176 6.9E-68 T 15-10-2018 IPR009858 Protein of unknown function DUF1415 D934_10605 2e09f747737624189847ced349313ae1 148 Pfam PF02643 Uncharacterized ACR, COG1430 34 140 1.3E-32 T 15-10-2018 IPR003795 Protein of unknown function DUF192 D934_10605 2e09f747737624189847ced349313ae1 148 Gene3D G3DSA:2.60.120.1140 17 142 9.0E-40 T 15-10-2018 IPR038695 Saro_0823-like superfamily D934_11460 8e50a4b9bf289196118749a94aaad59e 215 SUPERFAMILY SSF52540 10 199 5.57E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_11460 8e50a4b9bf289196118749a94aaad59e 215 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 12 210 1.4E-75 T 15-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 D934_11460 8e50a4b9bf289196118749a94aaad59e 215 Gene3D G3DSA:3.40.50.300 6 213 5.8E-40 T 15-10-2018 D934_11460 8e50a4b9bf289196118749a94aaad59e 215 Pfam PF00005 ABC transporter 29 165 4.8E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_11460 8e50a4b9bf289196118749a94aaad59e 215 SMART SM00382 36 215 6.1E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_11460 8e50a4b9bf289196118749a94aaad59e 215 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_08860 4101dbfa97a6b4f579728320ae33759d 681 Gene3D G3DSA:2.40.170.20 188 681 1.9E-46 T 15-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D934_08860 4101dbfa97a6b4f579728320ae33759d 681 SUPERFAMILY SSF56935 55 681 3.26E-82 T 15-10-2018 D934_08860 4101dbfa97a6b4f579728320ae33759d 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 173 3.1E-17 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain D934_08860 4101dbfa97a6b4f579728320ae33759d 681 Gene3D G3DSA:2.170.130.10 64 182 6.5E-27 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D934_08860 4101dbfa97a6b4f579728320ae33759d 681 Pfam PF00593 TonB dependent receptor 240 679 9.0E-32 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D934_02050 98265bda083869d245085175908301d3 249 PIRSF PIRSF000090 1 249 1.5E-79 T 15-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 D934_02050 98265bda083869d245085175908301d3 249 Pfam PF01012 Electron transfer flavoprotein domain 26 206 6.6E-38 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 D934_02050 98265bda083869d245085175908301d3 249 Gene3D G3DSA:3.40.50.620 1 248 5.0E-77 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D934_02050 98265bda083869d245085175908301d3 249 SMART SM00893 23 211 1.1E-52 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 D934_02050 98265bda083869d245085175908301d3 249 SUPERFAMILY SSF52402 1 242 1.74E-74 T 15-10-2018 D934_11550 3599962a8f5580b5634d50aeafd81045 263 Pfam PF00588 SpoU rRNA Methylase family 18 168 2.7E-36 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 D934_11550 3599962a8f5580b5634d50aeafd81045 263 PIRSF PIRSF004808 14 260 1.2E-71 T 15-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 D934_11550 3599962a8f5580b5634d50aeafd81045 263 SUPERFAMILY SSF75217 7 175 6.54E-37 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases D934_11550 3599962a8f5580b5634d50aeafd81045 263 Gene3D G3DSA:1.10.8.590 191 253 4.1E-19 T 15-10-2018 D934_11550 3599962a8f5580b5634d50aeafd81045 263 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 17 253 5.0E-66 T 15-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 D934_11550 3599962a8f5580b5634d50aeafd81045 263 Gene3D G3DSA:3.40.1280.10 14 179 1.1E-61 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D934_09560 716365daa8af7a09a0aac93bb4c0cf2d 131 SUPERFAMILY SSF52218 1 119 5.12E-12 T 15-10-2018 IPR029039 Flavoprotein-like superfamily D934_09560 716365daa8af7a09a0aac93bb4c0cf2d 131 Pfam PF03358 NADPH-dependent FMN reductase 2 85 2.7E-5 T 15-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 D934_09560 716365daa8af7a09a0aac93bb4c0cf2d 131 Gene3D G3DSA:3.40.50.360 1 127 4.2E-8 T 15-10-2018 IPR029039 Flavoprotein-like superfamily D934_05000 d8925b204c6728a3184a380529a36142 280 SMART SM00382 28 232 3.1E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_05000 d8925b204c6728a3184a380529a36142 280 SUPERFAMILY SSF52540 3 249 6.53E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_05000 d8925b204c6728a3184a380529a36142 280 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 246 5.2E-108 T 15-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 D934_05000 d8925b204c6728a3184a380529a36142 280 Gene3D G3DSA:3.40.50.300 3 250 2.7E-60 T 15-10-2018 D934_05000 d8925b204c6728a3184a380529a36142 280 Pfam PF00005 ABC transporter 19 174 4.3E-22 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_06155 faabbe7ee52a39eb1b258825c3a70604 283 Gene3D G3DSA:1.10.150.130 3 105 1.0E-9 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal D934_06155 faabbe7ee52a39eb1b258825c3a70604 283 SUPERFAMILY SSF56349 4 275 8.54E-37 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D934_06155 faabbe7ee52a39eb1b258825c3a70604 283 Pfam PF00589 Phage integrase family 120 275 7.0E-6 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D934_06155 faabbe7ee52a39eb1b258825c3a70604 283 Gene3D G3DSA:1.10.443.10 106 278 2.6E-18 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D934_07900 700913454c026681a4b953668fd6daad 95 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 8 86 1.7E-27 T 15-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system D934_07900 700913454c026681a4b953668fd6daad 95 Gene3D G3DSA:3.10.450.530 2 89 1.8E-18 T 15-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily D934_07465 fdea07db1c23b14a884353bd522891e9 222 SUPERFAMILY SSF53474 12 218 4.33E-44 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_07465 fdea07db1c23b14a884353bd522891e9 222 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 67 146 7.3E-5 T 15-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 D934_07465 fdea07db1c23b14a884353bd522891e9 222 Gene3D G3DSA:3.40.50.1820 3 222 2.6E-60 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_04695 5aba1e6a8647f37a25545d513731e7d7 105 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 3.6E-27 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 D934_04695 5aba1e6a8647f37a25545d513731e7d7 105 SUPERFAMILY SSF69754 1 99 4.19E-31 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like D934_04695 5aba1e6a8647f37a25545d513731e7d7 105 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 3.9E-24 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 D934_04695 5aba1e6a8647f37a25545d513731e7d7 105 Gene3D G3DSA:3.30.160.100 1 105 3.6E-29 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like D934_10360 edd80fceaf647fac318b6c3f3bf33af6 59 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 1 51 7.0E-7 T 15-10-2018 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 D934_05830 de8298788a600ed728feea9978ee149f 257 SUPERFAMILY SSF51366 1 255 5.57E-68 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D934_05830 de8298788a600ed728feea9978ee149f 257 Pfam PF00977 Histidine biosynthesis protein 5 238 4.4E-69 T 15-10-2018 IPR006062 Histidine biosynthesis GO:0000105 D934_05830 de8298788a600ed728feea9978ee149f 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 42.908 T 15-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 D934_05830 de8298788a600ed728feea9978ee149f 257 Gene3D G3DSA:3.20.20.70 1 257 2.2E-87 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_05830 de8298788a600ed728feea9978ee149f 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 1.6E-96 T 15-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 D934_08345 06e8452112e0533e1f4d0803fb77211d 311 Pfam PF00589 Phage integrase family 147 302 3.7E-11 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D934_08345 06e8452112e0533e1f4d0803fb77211d 311 Gene3D G3DSA:1.10.443.10 143 308 1.4E-21 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D934_08345 06e8452112e0533e1f4d0803fb77211d 311 Gene3D G3DSA:1.10.150.130 41 142 6.4E-6 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal D934_08345 06e8452112e0533e1f4d0803fb77211d 311 SUPERFAMILY SSF56349 43 303 5.3E-39 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D934_00535 f35adf8078faee1837b7a58913f9ed36 584 Gene3D G3DSA:2.60.40.1180 475 583 2.9E-31 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta D934_00535 f35adf8078faee1837b7a58913f9ed36 584 PIRSF PIRSF001092 60 336 1.2E-51 T 15-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 D934_00535 f35adf8078faee1837b7a58913f9ed36 584 PIRSF PIRSF001092 350 582 2.3E-34 T 15-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 D934_00535 f35adf8078faee1837b7a58913f9ed36 584 Gene3D G3DSA:3.20.20.80 77 474 6.8E-122 T 15-10-2018 D934_00535 f35adf8078faee1837b7a58913f9ed36 584 Pfam PF16757 Alpha-L-fucosidase C-terminal domain 506 580 4.9E-8 T 15-10-2018 IPR031919 Alpha-L-fucosidase, C-terminal KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 D934_00535 f35adf8078faee1837b7a58913f9ed36 584 SUPERFAMILY SSF51445 82 474 2.74E-103 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily D934_00535 f35adf8078faee1837b7a58913f9ed36 584 SMART SM00812 82 534 9.2E-226 T 15-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 D934_00535 f35adf8078faee1837b7a58913f9ed36 584 Pfam PF01120 Alpha-L-fucosidase 76 470 6.3E-103 T 15-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 D934_04865 3e2bad40eae9193b1391319ec294f10b 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 87.053 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 D934_04865 3e2bad40eae9193b1391319ec294f10b 243 Gene3D G3DSA:3.40.630.70 65 238 3.5E-58 T 15-10-2018 D934_04865 3e2bad40eae9193b1391319ec294f10b 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 38 208 2.4E-67 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 D934_04865 3e2bad40eae9193b1391319ec294f10b 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 42 222 4.3E-56 T 15-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 D934_04865 3e2bad40eae9193b1391319ec294f10b 243 Gene3D G3DSA:2.30.210.20 8 64 1.9E-24 T 15-10-2018 D934_04865 3e2bad40eae9193b1391319ec294f10b 243 SUPERFAMILY SSF55729 10 231 1.06E-84 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase D934_08165 5188c0640471038c9518befade6a52ed 444 SUPERFAMILY SSF50182 203 270 1.08E-10 T 15-10-2018 IPR010920 LSM domain superfamily D934_08165 5188c0640471038c9518befade6a52ed 444 Pfam PF00924 Mechanosensitive ion channel 163 415 2.9E-41 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D934_05630 eec7e80aecf3fad8c56b3e9b76d7b889 161 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 152 6.7E-36 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 D934_05630 eec7e80aecf3fad8c56b3e9b76d7b889 161 Gene3D G3DSA:3.40.390.30 6 161 7.0E-48 T 15-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 D934_05630 eec7e80aecf3fad8c56b3e9b76d7b889 161 SUPERFAMILY SSF55486 23 157 4.39E-43 T 15-10-2018 D934_05630 eec7e80aecf3fad8c56b3e9b76d7b889 161 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 15-10-2018 IPR020549 Endoribonuclease YbeY, conserved site D934_05630 eec7e80aecf3fad8c56b3e9b76d7b889 161 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 7 155 23.228 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 D934_05630 eec7e80aecf3fad8c56b3e9b76d7b889 161 Pfam PF02130 Uncharacterized protein family UPF0054 27 151 1.8E-34 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 D934_02395 b39b50725f67fe520d1027d3f29a8635 350 Gene3D G3DSA:3.40.190.10 138 343 4.2E-110 T 15-10-2018 D934_02395 b39b50725f67fe520d1027d3f29a8635 350 Gene3D G3DSA:3.40.190.10 40 330 4.2E-110 T 15-10-2018 D934_02395 b39b50725f67fe520d1027d3f29a8635 350 SUPERFAMILY SSF53850 41 310 8.4E-37 T 15-10-2018 D934_02395 b39b50725f67fe520d1027d3f29a8635 350 Pfam PF13531 Bacterial extracellular solute-binding protein 55 298 1.9E-16 T 15-10-2018 D934_00175 10d89c9b5a29a6f33ca102cc39c58174 155 Gene3D G3DSA:1.10.455.10 2 154 8.7E-59 T 15-10-2018 IPR036823 Ribosomal protein S7 domain superfamily D934_00175 10d89c9b5a29a6f33ca102cc39c58174 155 Pfam PF00177 Ribosomal protein S7p/S5e 1 148 1.2E-64 T 15-10-2018 IPR023798 Ribosomal protein S7 domain D934_00175 10d89c9b5a29a6f33ca102cc39c58174 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 35.719 T 15-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 D934_00175 10d89c9b5a29a6f33ca102cc39c58174 155 PIRSF PIRSF002122 2 155 9.2E-62 T 15-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 D934_00175 10d89c9b5a29a6f33ca102cc39c58174 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 15-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D934_00175 10d89c9b5a29a6f33ca102cc39c58174 155 SUPERFAMILY SSF47973 3 148 8.5E-58 T 15-10-2018 IPR036823 Ribosomal protein S7 domain superfamily D934_00175 10d89c9b5a29a6f33ca102cc39c58174 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 6.9E-66 T 15-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 D934_13035 b1106609a949447f1b3e0692fb5b3554 393 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 15-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 D934_13035 b1106609a949447f1b3e0692fb5b3554 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.5E-20 T 15-10-2018 D934_13035 b1106609a949447f1b3e0692fb5b3554 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.5E-20 T 15-10-2018 D934_13035 b1106609a949447f1b3e0692fb5b3554 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.5E-20 T 15-10-2018 D934_13035 b1106609a949447f1b3e0692fb5b3554 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.5E-20 T 15-10-2018 D934_13035 b1106609a949447f1b3e0692fb5b3554 393 SUPERFAMILY SSF51905 7 386 8.55E-59 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_13035 b1106609a949447f1b3e0692fb5b3554 393 Gene3D G3DSA:3.50.50.60 8 339 4.9E-107 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D934_13035 b1106609a949447f1b3e0692fb5b3554 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 391 1.7E-132 T 15-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 D934_13035 b1106609a949447f1b3e0692fb5b3554 393 Gene3D G3DSA:3.30.9.50 82 270 4.9E-107 T 15-10-2018 D934_13035 b1106609a949447f1b3e0692fb5b3554 393 Pfam PF01494 FAD binding domain 8 319 1.8E-31 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 D934_02670 641ea0e6372874907f516e067a66740b 1008 SUPERFAMILY SSF56935 112 1008 9.16E-57 T 15-10-2018 D934_02670 641ea0e6372874907f516e067a66740b 1008 SUPERFAMILY SSF49452 32 106 2.75E-7 T 15-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 D934_02670 641ea0e6372874907f516e067a66740b 1008 Pfam PF00593 TonB dependent receptor 403 1006 3.3E-15 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D934_03665 f22f9a6923d9bf6c5d03e0af7ff19f97 1228 SUPERFAMILY SSF50998 745 1205 2.75E-9 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily D934_03665 f22f9a6923d9bf6c5d03e0af7ff19f97 1228 Pfam PF05567 Neisseria PilC beta-propeller domain 752 1054 3.9E-58 T 15-10-2018 IPR008707 PilC beta-propeller domain D934_12030 cd9ffcd4bb3ac17d43098274c392814f 246 Pfam PF00902 Sec-independent protein translocase protein (TatC) 15 225 2.4E-65 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D934_12030 cd9ffcd4bb3ac17d43098274c392814f 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 3.5E-43 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D934_12030 cd9ffcd4bb3ac17d43098274c392814f 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 158 186 3.5E-43 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D934_12030 cd9ffcd4bb3ac17d43098274c392814f 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 3.5E-43 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D934_12030 cd9ffcd4bb3ac17d43098274c392814f 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 12 39 3.5E-43 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D934_12030 cd9ffcd4bb3ac17d43098274c392814f 246 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 8 242 16.2 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D934_12030 cd9ffcd4bb3ac17d43098274c392814f 246 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 13 230 2.5E-65 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D934_12030 cd9ffcd4bb3ac17d43098274c392814f 246 ProSitePatterns PS01218 TatC family signature. 158 177 - T 15-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site D934_00455 38b517b11fdd6e2b9c77307d655efda8 312 PIRSF PIRSF003097 17 308 5.1E-47 T 15-10-2018 IPR004513 Cell division protein FtsX GO:0016021 D934_10880 c73c0c274da4813fcda82dea900c72ed 374 SMART SM00830 23 104 2.0E-29 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D934_10880 c73c0c274da4813fcda82dea900c72ed 374 Pfam PF01842 ACT domain 292 357 1.4E-10 T 15-10-2018 IPR002912 ACT domain D934_10880 c73c0c274da4813fcda82dea900c72ed 374 TIGRFAM TIGR01807 CM_P2: chorismate mutase 19 94 5.8E-24 T 15-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 D934_10880 c73c0c274da4813fcda82dea900c72ed 374 PIRSF PIRSF001500 12 374 6.1E-145 T 15-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 D934_10880 c73c0c274da4813fcda82dea900c72ed 374 Gene3D G3DSA:3.40.190.10 108 279 2.1E-52 T 15-10-2018 D934_10880 c73c0c274da4813fcda82dea900c72ed 374 Pfam PF01817 Chorismate mutase type II 23 102 4.9E-21 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D934_10880 c73c0c274da4813fcda82dea900c72ed 374 Gene3D G3DSA:3.40.190.10 186 271 2.1E-52 T 15-10-2018 D934_10880 c73c0c274da4813fcda82dea900c72ed 374 SUPERFAMILY SSF53850 105 288 7.49E-51 T 15-10-2018 D934_10880 c73c0c274da4813fcda82dea900c72ed 374 Gene3D G3DSA:3.30.70.260 283 373 1.1E-29 T 15-10-2018 D934_10880 c73c0c274da4813fcda82dea900c72ed 374 Gene3D G3DSA:1.20.59.10 19 104 3.5E-27 T 15-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D934_10880 c73c0c274da4813fcda82dea900c72ed 374 SUPERFAMILY SSF55021 276 370 3.05E-28 T 15-10-2018 D934_10880 c73c0c274da4813fcda82dea900c72ed 374 SUPERFAMILY SSF48600 19 107 4.27E-20 T 15-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D934_10880 c73c0c274da4813fcda82dea900c72ed 374 Pfam PF00800 Prephenate dehydratase 106 282 9.5E-59 T 15-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 D934_13555 07c49956538073934ad7ac9fb754a795 157 Pfam PF00583 Acetyltransferase (GNAT) family 24 140 2.2E-10 T 15-10-2018 IPR000182 GNAT domain D934_13555 07c49956538073934ad7ac9fb754a795 157 SUPERFAMILY SSF55729 9 145 1.6E-24 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase D934_13555 07c49956538073934ad7ac9fb754a795 157 Gene3D G3DSA:3.40.630.30 1 156 3.6E-32 T 15-10-2018 D934_02130 8057c38bd8d260ca489173f2e7289137 417 PIRSF PIRSF036483 2 417 1.3E-220 T 15-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 D934_02130 8057c38bd8d260ca489173f2e7289137 417 SUPERFAMILY SSF53784 6 414 4.71E-101 T 15-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D934_02130 8057c38bd8d260ca489173f2e7289137 417 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 398 43.122 T 15-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 D934_02130 8057c38bd8d260ca489173f2e7289137 417 Gene3D G3DSA:3.40.50.460 139 385 3.6E-139 T 15-10-2018 D934_02130 8057c38bd8d260ca489173f2e7289137 417 Gene3D G3DSA:3.40.50.450 6 398 3.6E-139 T 15-10-2018 D934_02130 8057c38bd8d260ca489173f2e7289137 417 Pfam PF00365 Phosphofructokinase 10 321 8.2E-50 T 15-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D934_02130 8057c38bd8d260ca489173f2e7289137 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 256 278 1.3E-10 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D934_02130 8057c38bd8d260ca489173f2e7289137 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 192 1.3E-10 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D934_02130 8057c38bd8d260ca489173f2e7289137 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 151 1.3E-10 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D934_02130 8057c38bd8d260ca489173f2e7289137 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 1.3E-10 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 D934_02800 238eddae03cda45c1cfdff8ee12c5221 239 Gene3D G3DSA:3.40.50.1360 7 239 1.9E-52 T 15-10-2018 D934_02800 238eddae03cda45c1cfdff8ee12c5221 239 SUPERFAMILY SSF100950 10 232 3.23E-45 T 15-10-2018 IPR037171 NagB/RpiA transferase-like D934_02800 238eddae03cda45c1cfdff8ee12c5221 239 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 225 3.7E-45 T 15-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 D934_02800 238eddae03cda45c1cfdff8ee12c5221 239 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 19 225 1.9E-38 T 15-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 D934_00100 942ca52f532565374c088c82473e6244 1132 Pfam PF10150 Ribonuclease E/G family 120 389 3.3E-96 T 15-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 D934_00100 942ca52f532565374c088c82473e6244 1132 Hamap MF_00970 Ribonuclease E [rne]. 1 1074 31.733 T 15-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 D934_00100 942ca52f532565374c088c82473e6244 1132 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 1.7E-163 T 15-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 D934_00100 942ca52f532565374c088c82473e6244 1132 Gene3D G3DSA:2.40.50.140 31 124 1.5E-31 T 15-10-2018 D934_00100 942ca52f532565374c088c82473e6244 1132 Pfam PF00575 S1 RNA binding domain 36 117 1.8E-11 T 15-10-2018 IPR003029 S1 domain GO:0003676 D934_00100 942ca52f532565374c088c82473e6244 1132 SUPERFAMILY SSF50249 40 124 3.77E-18 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_00100 942ca52f532565374c088c82473e6244 1132 Gene3D G3DSA:3.40.1260.20 399 507 3.6E-35 T 15-10-2018 D934_00100 942ca52f532565374c088c82473e6244 1132 SMART SM00316 37 118 8.2E-9 T 15-10-2018 IPR022967 RNA-binding domain, S1 D934_04680 9efd9007084ae65a9e9e5e3fbd293465 130 Gene3D G3DSA:3.40.50.510 3 129 3.7E-24 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 D934_04680 9efd9007084ae65a9e9e5e3fbd293465 130 SUPERFAMILY SSF53062 4 125 2.49E-24 T 15-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 D934_04680 9efd9007084ae65a9e9e5e3fbd293465 130 Pfam PF03610 PTS system fructose IIA component 4 104 6.6E-14 T 15-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 D934_13295 e4043999e365cdad11304f959001357a 431 Gene3D G3DSA:3.60.15.10 143 426 3.6E-103 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D934_13295 e4043999e365cdad11304f959001357a 431 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 4 132 2.8E-28 T 15-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 D934_13295 e4043999e365cdad11304f959001357a 431 Gene3D G3DSA:3.90.190.10 1 142 6.0E-37 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like D934_13295 e4043999e365cdad11304f959001357a 431 SUPERFAMILY SSF56281 150 426 3.66E-46 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D934_13295 e4043999e365cdad11304f959001357a 431 SUPERFAMILY SSF52799 5 98 2.26E-8 T 15-10-2018 IPR029021 Protein-tyrosine phosphatase-like D934_13295 e4043999e365cdad11304f959001357a 431 Pfam PF04273 Putative phosphatase (DUF442) 3 111 7.9E-50 T 15-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 D934_13295 e4043999e365cdad11304f959001357a 431 SMART SM00849 156 345 4.5E-23 T 15-10-2018 IPR001279 Metallo-beta-lactamase D934_13295 e4043999e365cdad11304f959001357a 431 Pfam PF00753 Metallo-beta-lactamase superfamily 157 345 7.0E-23 T 15-10-2018 IPR001279 Metallo-beta-lactamase D934_00040 6c967bfde9facdda5e264e2138cb04b3 565 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 24 556 33.836 T 15-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 D934_00040 6c967bfde9facdda5e264e2138cb04b3 565 Pfam PF01435 Peptidase family M48 89 285 6.9E-43 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 D934_00040 6c967bfde9facdda5e264e2138cb04b3 565 Gene3D G3DSA:1.25.40.10 341 529 1.5E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_00040 6c967bfde9facdda5e264e2138cb04b3 565 Gene3D G3DSA:3.30.2010.10 88 169 6.0E-8 T 15-10-2018 D934_00040 6c967bfde9facdda5e264e2138cb04b3 565 SUPERFAMILY SSF48452 353 458 1.1E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_01975 d20fa19d56c182e3f6f65d90b9ab91b9 125 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 97 1.0E-44 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 D934_01975 d20fa19d56c182e3f6f65d90b9ab91b9 125 SUPERFAMILY SSF89919 4 112 3.01E-27 T 15-10-2018 IPR023799 Ribosome-binding factor A domain superfamily D934_01975 d20fa19d56c182e3f6f65d90b9ab91b9 125 Gene3D G3DSA:3.30.300.20 3 105 2.7E-28 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta D934_01975 d20fa19d56c182e3f6f65d90b9ab91b9 125 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 7 110 25.97 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 D934_01975 d20fa19d56c182e3f6f65d90b9ab91b9 125 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 7 113 2.7E-25 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 D934_01975 d20fa19d56c182e3f6f65d90b9ab91b9 125 Pfam PF02033 Ribosome-binding factor A 8 110 4.4E-27 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 D934_01975 d20fa19d56c182e3f6f65d90b9ab91b9 125 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 15-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 D934_05195 57da9a0c0b96653c8a383f58a4276250 166 Pfam PF00959 Phage lysozyme 31 137 2.0E-20 T 15-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 D934_05195 57da9a0c0b96653c8a383f58a4276250 166 SUPERFAMILY SSF53955 5 148 1.74E-46 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_05195 57da9a0c0b96653c8a383f58a4276250 166 Gene3D G3DSA:1.10.530.40 3 154 3.9E-49 T 15-10-2018 D934_08495 57da9a0c0b96653c8a383f58a4276250 166 Pfam PF00959 Phage lysozyme 31 137 2.0E-20 T 15-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 D934_08495 57da9a0c0b96653c8a383f58a4276250 166 SUPERFAMILY SSF53955 5 148 1.74E-46 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_08495 57da9a0c0b96653c8a383f58a4276250 166 Gene3D G3DSA:1.10.530.40 3 154 3.9E-49 T 15-10-2018 D934_07090 57da9a0c0b96653c8a383f58a4276250 166 Pfam PF00959 Phage lysozyme 31 137 2.0E-20 T 15-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 D934_07090 57da9a0c0b96653c8a383f58a4276250 166 SUPERFAMILY SSF53955 5 148 1.74E-46 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_07090 57da9a0c0b96653c8a383f58a4276250 166 Gene3D G3DSA:1.10.530.40 3 154 3.9E-49 T 15-10-2018 D934_06605 57da9a0c0b96653c8a383f58a4276250 166 Pfam PF00959 Phage lysozyme 31 137 2.0E-20 T 15-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 D934_06605 57da9a0c0b96653c8a383f58a4276250 166 SUPERFAMILY SSF53955 5 148 1.74E-46 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_06605 57da9a0c0b96653c8a383f58a4276250 166 Gene3D G3DSA:1.10.530.40 3 154 3.9E-49 T 15-10-2018 D934_01355 d36f7ae1532c1abdeb9c804aa45873dd 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 143 162 1.1E-6 T 15-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 D934_01355 d36f7ae1532c1abdeb9c804aa45873dd 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 95 111 1.1E-6 T 15-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 D934_01355 d36f7ae1532c1abdeb9c804aa45873dd 460 PRINTS PR00741 Glycosyl hydrolase family 29 signature 283 304 1.1E-6 T 15-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 D934_01355 d36f7ae1532c1abdeb9c804aa45873dd 460 Pfam PF00754 F5/8 type C domain 348 445 8.6E-10 T 15-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain D934_01355 d36f7ae1532c1abdeb9c804aa45873dd 460 Gene3D G3DSA:3.20.20.80 23 332 2.1E-112 T 15-10-2018 D934_01355 d36f7ae1532c1abdeb9c804aa45873dd 460 SMART SM00812 33 357 1.8E-15 T 15-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 D934_01355 d36f7ae1532c1abdeb9c804aa45873dd 460 Gene3D G3DSA:2.60.120.260 341 453 5.7E-23 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily D934_01355 d36f7ae1532c1abdeb9c804aa45873dd 460 Pfam PF01120 Alpha-L-fucosidase 71 324 6.6E-41 T 15-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 D934_01355 d36f7ae1532c1abdeb9c804aa45873dd 460 SUPERFAMILY SSF51445 30 326 3.05E-83 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily D934_01355 d36f7ae1532c1abdeb9c804aa45873dd 460 SUPERFAMILY SSF49785 347 452 9.45E-11 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily D934_12660 7e16b30ecad35796ee5bc4e0f7c42744 417 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 29 219 24.42 T 15-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 D934_12660 7e16b30ecad35796ee5bc4e0f7c42744 417 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 129 235 1.6E-43 T 15-10-2018 IPR012997 Rare lipoprotein A D934_12660 7e16b30ecad35796ee5bc4e0f7c42744 417 Pfam PF05036 Sporulation related domain 345 405 1.3E-7 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 D934_12660 7e16b30ecad35796ee5bc4e0f7c42744 417 Pfam PF03330 Lytic transglycolase 128 216 3.1E-23 T 15-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain D934_12660 7e16b30ecad35796ee5bc4e0f7c42744 417 SUPERFAMILY SSF110997 344 410 6.8E-5 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D934_12660 7e16b30ecad35796ee5bc4e0f7c42744 417 SUPERFAMILY SSF50685 126 217 2.89E-9 T 15-10-2018 IPR036908 RlpA-like domain superfamily D934_12660 7e16b30ecad35796ee5bc4e0f7c42744 417 Gene3D G3DSA:2.40.40.10 126 220 4.6E-35 T 15-10-2018 IPR036908 RlpA-like domain superfamily D934_11525 49c4e7344e98116d1610287e26cd4b4c 229 Gene3D G3DSA:3.40.50.1000 15 213 4.4E-52 T 15-10-2018 IPR023214 HAD superfamily D934_11525 49c4e7344e98116d1610287e26cd4b4c 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 192 2.1E-8 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D934_11525 49c4e7344e98116d1610287e26cd4b4c 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 192 9.0E-31 T 15-10-2018 D934_11525 49c4e7344e98116d1610287e26cd4b4c 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 154 8.1E-5 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D934_11525 49c4e7344e98116d1610287e26cd4b4c 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 107 120 8.1E-5 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D934_11525 49c4e7344e98116d1610287e26cd4b4c 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 12 23 8.1E-5 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D934_11525 49c4e7344e98116d1610287e26cd4b4c 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 156 176 8.1E-5 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D934_11525 49c4e7344e98116d1610287e26cd4b4c 229 Gene3D G3DSA:1.10.150.240 27 93 4.4E-52 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D934_11525 49c4e7344e98116d1610287e26cd4b4c 229 SUPERFAMILY SSF56784 13 220 5.34E-52 T 15-10-2018 IPR036412 HAD-like superfamily D934_11525 49c4e7344e98116d1610287e26cd4b4c 229 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 15 220 1.0E-91 T 15-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 D934_11525 49c4e7344e98116d1610287e26cd4b4c 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 59 188 2.0E-10 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D934_00200 6915aea800dd2732ce424f4e13959ff6 175 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 24.959 T 15-10-2018 IPR022973 Ribosomal protein L10 D934_00200 6915aea800dd2732ce424f4e13959ff6 175 SUPERFAMILY SSF160369 7 160 6.93E-41 T 15-10-2018 D934_00200 6915aea800dd2732ce424f4e13959ff6 175 Pfam PF00466 Ribosomal protein L10 7 101 2.7E-23 T 15-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 D934_00200 6915aea800dd2732ce424f4e13959ff6 175 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 15-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_00200 6915aea800dd2732ce424f4e13959ff6 175 Gene3D G3DSA:3.30.70.1730 6 167 4.6E-29 T 15-10-2018 D934_08150 cf7c233249effa2893251d5d887417fc 71 Pfam PF01165 Ribosomal protein S21 3 56 2.1E-22 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_08150 cf7c233249effa2893251d5d887417fc 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 9.0E-10 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_08150 cf7c233249effa2893251d5d887417fc 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.899 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_08150 cf7c233249effa2893251d5d887417fc 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.0E-24 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_08150 cf7c233249effa2893251d5d887417fc 71 Gene3D G3DSA:1.20.5.1150 16 54 2.7E-20 T 15-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_08150 cf7c233249effa2893251d5d887417fc 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 15-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_08150 cf7c233249effa2893251d5d887417fc 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 8.3E-16 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_08150 cf7c233249effa2893251d5d887417fc 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 8.3E-16 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_08150 cf7c233249effa2893251d5d887417fc 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 8.3E-16 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_08150 cf7c233249effa2893251d5d887417fc 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 8.3E-16 T 15-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_12910 c01ca60558c53deb801e5fffa5e77291 290 Pfam PF01551 Peptidase family M23 167 265 2.1E-24 T 15-10-2018 IPR016047 Peptidase M23 D934_12910 c01ca60558c53deb801e5fffa5e77291 290 SUPERFAMILY SSF51261 145 266 2.88E-28 T 15-10-2018 IPR011055 Duplicated hybrid motif D934_12910 c01ca60558c53deb801e5fffa5e77291 290 Gene3D G3DSA:2.70.70.10 140 274 3.4E-34 T 15-10-2018 IPR011055 Duplicated hybrid motif D934_12920 b0ea8af0c45f834c781fccddfe743752 262 SUPERFAMILY SSF64167 1 254 6.93E-83 T 15-10-2018 D934_12920 b0ea8af0c45f834c781fccddfe743752 262 Pfam PF01975 Survival protein SurE 3 188 3.6E-61 T 15-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 D934_12920 b0ea8af0c45f834c781fccddfe743752 262 Gene3D G3DSA:3.40.1210.10 1 256 1.9E-93 T 15-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 D934_12920 b0ea8af0c45f834c781fccddfe743752 262 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 239 2.8E-72 T 15-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 D934_12920 b0ea8af0c45f834c781fccddfe743752 262 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 256 41.256 T 15-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 D934_13590 84624f712282791db2e79ce1c5a5937f 143 TIGRFAM TIGR00166 S6: ribosomal protein bS6 3 93 6.6E-31 T 15-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13590 84624f712282791db2e79ce1c5a5937f 143 SUPERFAMILY SSF54995 2 104 4.97E-34 T 15-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13590 84624f712282791db2e79ce1c5a5937f 143 Gene3D G3DSA:3.30.70.60 2 93 8.5E-29 T 15-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 D934_13590 84624f712282791db2e79ce1c5a5937f 143 Pfam PF01250 Ribosomal protein S6 4 92 2.2E-26 T 15-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_13590 84624f712282791db2e79ce1c5a5937f 143 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 2 95 20.824 T 15-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 D934_08770 a14bec5ad31e05739b6bd9b6afcc4f33 242 ProSitePatterns PS01068 OmpA-like domain. 160 204 - T 15-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 D934_08770 a14bec5ad31e05739b6bd9b6afcc4f33 242 SUPERFAMILY SSF103088 115 230 1.02E-39 T 15-10-2018 IPR036737 OmpA-like domain superfamily D934_08770 a14bec5ad31e05739b6bd9b6afcc4f33 242 Pfam PF13488 Glycine zipper 52 97 1.5E-11 T 15-10-2018 IPR039567 Glycine zipper domain D934_08770 a14bec5ad31e05739b6bd9b6afcc4f33 242 PRINTS PR01021 OMPA domain signature 128 150 1.1E-15 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D934_08770 a14bec5ad31e05739b6bd9b6afcc4f33 242 PRINTS PR01021 OMPA domain signature 173 189 1.1E-15 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D934_08770 a14bec5ad31e05739b6bd9b6afcc4f33 242 PRINTS PR01021 OMPA domain signature 158 173 1.1E-15 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D934_08770 a14bec5ad31e05739b6bd9b6afcc4f33 242 Gene3D G3DSA:3.30.1330.60 91 237 3.0E-47 T 15-10-2018 IPR036737 OmpA-like domain superfamily D934_08770 a14bec5ad31e05739b6bd9b6afcc4f33 242 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 173 190 1.2E-9 T 15-10-2018 D934_08770 a14bec5ad31e05739b6bd9b6afcc4f33 242 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 211 231 1.2E-9 T 15-10-2018 D934_08770 a14bec5ad31e05739b6bd9b6afcc4f33 242 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 191 210 1.2E-9 T 15-10-2018 D934_08770 a14bec5ad31e05739b6bd9b6afcc4f33 242 Pfam PF00691 OmpA family 127 222 6.7E-23 T 15-10-2018 IPR006665 OmpA-like domain D934_13325 3312b07f45032d476c45ebbb81dcab50 320 Pfam PF07920 Protein of unknown function (DUF1684) 175 311 8.1E-41 T 15-10-2018 IPR012467 Protein of unknown function DUF1684 D934_10520 f58fb33008e1ea621be6d51fa088d070 313 Gene3D G3DSA:3.40.50.1820 1 313 1.7E-113 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_10520 f58fb33008e1ea621be6d51fa088d070 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 1.2E-13 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 D934_10520 f58fb33008e1ea621be6d51fa088d070 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.2E-13 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 D934_10520 f58fb33008e1ea621be6d51fa088d070 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 1.2E-13 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 D934_10520 f58fb33008e1ea621be6d51fa088d070 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 1.4E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D934_10520 f58fb33008e1ea621be6d51fa088d070 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 1.4E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D934_10520 f58fb33008e1ea621be6d51fa088d070 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 1.4E-5 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D934_10520 f58fb33008e1ea621be6d51fa088d070 313 SUPERFAMILY SSF53474 2 301 2.16E-64 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_10520 f58fb33008e1ea621be6d51fa088d070 313 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 312 7.7E-164 T 15-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 D934_10520 f58fb33008e1ea621be6d51fa088d070 313 PIRSF PIRSF006431 1 313 1.0E-137 T 15-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 D934_10520 f58fb33008e1ea621be6d51fa088d070 313 Pfam PF00561 alpha/beta hydrolase fold 35 298 1.9E-31 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D934_08805 1158c08317901f06b55480bccb71d29b 222 Gene3D G3DSA:3.30.70.60 96 211 8.2E-34 T 15-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 D934_08805 1158c08317901f06b55480bccb71d29b 222 Pfam PF04350 Pilus assembly protein, PilO 54 201 3.7E-50 T 15-10-2018 IPR007445 Pilus assembly protein, PilO D934_08805 1158c08317901f06b55480bccb71d29b 222 PIRSF PIRSF016482 1 219 6.7E-103 T 15-10-2018 IPR007445 Pilus assembly protein, PilO D934_10145 b17eb0ba7083dd7e8a622fa080f613c0 106 Pfam PF04956 TrbC/VIRB2 family 2 81 5.0E-13 T 15-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 D934_04595 f397b0d7d40ad761ba5d842dfec65b73 500 SUPERFAMILY SSF49899 277 453 1.85E-7 T 15-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D934_04595 f397b0d7d40ad761ba5d842dfec65b73 500 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 292 448 2.2E-8 T 15-10-2018 D934_04595 f397b0d7d40ad761ba5d842dfec65b73 500 Gene3D G3DSA:2.60.120.200 261 485 3.9E-10 T 15-10-2018 D934_05775 e4f4d91100c9745a98b30eb610d57f0e 306 SUPERFAMILY SSF53335 83 273 1.25E-33 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_05775 e4f4d91100c9745a98b30eb610d57f0e 306 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 304 1.4E-86 T 15-10-2018 D934_05775 e4f4d91100c9745a98b30eb610d57f0e 306 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 304 28.916 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 D934_05775 e4f4d91100c9745a98b30eb610d57f0e 306 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 297 1.6E-60 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 D934_05775 e4f4d91100c9745a98b30eb610d57f0e 306 PIRSF PIRSF000401 1 306 4.2E-75 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 D934_05775 e4f4d91100c9745a98b30eb610d57f0e 306 Gene3D G3DSA:3.40.50.150 107 305 4.8E-45 T 15-10-2018 D934_06000 36f1b6d9288fdc93b797402c65deb986 243 Gene3D G3DSA:1.20.1440.120 82 242 2.7E-38 T 15-10-2018 D934_06000 36f1b6d9288fdc93b797402c65deb986 243 Gene3D G3DSA:2.40.50.140 4 79 4.2E-24 T 15-10-2018 D934_06000 36f1b6d9288fdc93b797402c65deb986 243 SUPERFAMILY SSF50249 5 78 3.6E-11 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_06000 36f1b6d9288fdc93b797402c65deb986 243 Pfam PF11967 Recombination protein O N terminal 5 78 5.3E-17 T 15-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal D934_06000 36f1b6d9288fdc93b797402c65deb986 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 151 5.2E-22 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 D934_06000 36f1b6d9288fdc93b797402c65deb986 243 Hamap MF_00201 DNA repair protein RecO [recO]. 2 236 18.677 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 D934_06000 36f1b6d9288fdc93b797402c65deb986 243 Pfam PF02565 Recombination protein O C terminal 84 231 5.0E-19 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 D934_02910 e76759c85bdc2e4cdf3af1d9efecdef2 739 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 117 481 8.3E-65 T 15-10-2018 IPR010090 Phage tail tape measure protein D934_02910 e76759c85bdc2e4cdf3af1d9efecdef2 739 Pfam PF10145 Phage-related minor tail protein 162 373 1.5E-32 T 15-10-2018 IPR010090 Phage tail tape measure protein D934_05205 f7eb51f6bbf4f83e27726e94208107e8 845 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 483 805 1.8E-76 T 15-10-2018 IPR006500 DNA primase, phage/plasmid D934_05205 f7eb51f6bbf4f83e27726e94208107e8 845 Pfam PF08706 D5 N terminal like 377 533 7.0E-29 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D934_05205 f7eb51f6bbf4f83e27726e94208107e8 845 SMART SM00885 375 534 1.7E-35 T 15-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal D934_05205 f7eb51f6bbf4f83e27726e94208107e8 845 Gene3D G3DSA:3.40.50.300 540 706 2.2E-7 T 15-10-2018 D934_05205 f7eb51f6bbf4f83e27726e94208107e8 845 SUPERFAMILY SSF52540 551 702 2.12E-9 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_13570 632b0fe7ddd2692d296d6dfb30e5d894 243 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 40 225 5.0E-70 T 15-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 D934_13570 632b0fe7ddd2692d296d6dfb30e5d894 243 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 98 223 2.0E-36 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 D934_13570 632b0fe7ddd2692d296d6dfb30e5d894 243 Hamap MF_00509 Cell division protein ZipA [zipA]. 5 227 17.631 T 15-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 D934_13570 632b0fe7ddd2692d296d6dfb30e5d894 243 Gene3D G3DSA:3.30.1400.10 94 232 3.7E-38 T 15-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 D934_13570 632b0fe7ddd2692d296d6dfb30e5d894 243 SUPERFAMILY SSF64383 95 231 1.2E-34 T 15-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 D934_13570 632b0fe7ddd2692d296d6dfb30e5d894 243 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 98 226 2.0E-70 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 D934_13570 632b0fe7ddd2692d296d6dfb30e5d894 243 SMART SM00771 95 225 2.4E-58 T 15-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 D934_09115 8cf8663b0dd2a25a1b1caed828d75a97 131 Pfam PF01850 PIN domain 6 116 6.6E-7 T 15-10-2018 IPR002716 PIN domain D934_09115 8cf8663b0dd2a25a1b1caed828d75a97 131 SUPERFAMILY SSF88723 1 116 4.21E-15 T 15-10-2018 IPR029060 PIN-like domain superfamily D934_08990 7de627498143b6d706f2b0e174ec77e3 699 Pfam PF05876 Phage terminase large subunit (GpA) 47 634 3.1E-167 T 15-10-2018 IPR008866 Bacteriophage lambda, GpA D934_08990 7de627498143b6d706f2b0e174ec77e3 699 Gene3D G3DSA:3.40.50.300 8 224 6.3E-6 T 15-10-2018 D934_07770 7de627498143b6d706f2b0e174ec77e3 699 Pfam PF05876 Phage terminase large subunit (GpA) 47 634 3.1E-167 T 15-10-2018 IPR008866 Bacteriophage lambda, GpA D934_07770 7de627498143b6d706f2b0e174ec77e3 699 Gene3D G3DSA:3.40.50.300 8 224 6.3E-6 T 15-10-2018 D934_03000 b4ff8c57f1ec80aaee4499c7fbfcdef6 92 Pfam PF08774 VRR-NUC domain 31 82 8.0E-7 T 15-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 D934_03000 b4ff8c57f1ec80aaee4499c7fbfcdef6 92 Gene3D G3DSA:3.40.1350.10 5 92 1.2E-29 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 D934_03000 b4ff8c57f1ec80aaee4499c7fbfcdef6 92 SMART SM00990 5 85 1.7E-17 T 15-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 D934_05325 b4ff8c57f1ec80aaee4499c7fbfcdef6 92 Pfam PF08774 VRR-NUC domain 31 82 8.0E-7 T 15-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 D934_05325 b4ff8c57f1ec80aaee4499c7fbfcdef6 92 Gene3D G3DSA:3.40.1350.10 5 92 1.2E-29 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 D934_05325 b4ff8c57f1ec80aaee4499c7fbfcdef6 92 SMART SM00990 5 85 1.7E-17 T 15-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 D934_06875 5c3aeb87300065530bdf460418256599 638 Pfam PF13632 Glycosyl transferase family group 2 240 480 3.4E-16 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D934_06875 5c3aeb87300065530bdf460418256599 638 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 4 638 46.061 T 15-10-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 D934_06875 5c3aeb87300065530bdf460418256599 638 Gene3D G3DSA:3.90.550.10 136 368 3.7E-17 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_06875 5c3aeb87300065530bdf460418256599 638 SUPERFAMILY SSF53448 141 427 1.13E-27 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_04900 ab2ce1f730f447dd30421344e0b327db 133 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 10 128 17.373 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 D934_04900 ab2ce1f730f447dd30421344e0b327db 133 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 11 123 1.7E-20 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 D934_01135 f13caa4fb2aa37698cc498e915cb8b65 260 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 255 77.849 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 D934_01135 f13caa4fb2aa37698cc498e915cb8b65 260 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 250 4.2E-62 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 D934_01135 f13caa4fb2aa37698cc498e915cb8b65 260 Gene3D G3DSA:3.20.20.70 1 259 1.7E-89 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_01135 f13caa4fb2aa37698cc498e915cb8b65 260 SUPERFAMILY SSF63892 4 252 6.8E-77 T 15-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 D934_01135 f13caa4fb2aa37698cc498e915cb8b65 260 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 249 4.8E-79 T 15-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 D934_06450 9b38bf6c311c96a02f225914a19b47a4 369 SUPERFAMILY SSF56349 69 328 3.53E-31 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D934_06450 9b38bf6c311c96a02f225914a19b47a4 369 Pfam PF00589 Phage integrase family 185 325 1.4E-11 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D934_06450 9b38bf6c311c96a02f225914a19b47a4 369 Gene3D G3DSA:1.10.443.10 169 345 5.6E-20 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D934_09345 c8ef4dca0aef74b2bf73f62e93bbc51b 442 Gene3D G3DSA:3.40.50.300 2 198 1.8E-29 T 15-10-2018 D934_09345 c8ef4dca0aef74b2bf73f62e93bbc51b 442 Pfam PF05707 Zonular occludens toxin (Zot) 1 200 1.8E-49 T 15-10-2018 IPR008900 Zona occludens toxin D934_12560 92964abc40eed8d0460bdc153e4c082c 240 Gene3D G3DSA:3.60.40.10 5 240 1.5E-52 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D934_12560 92964abc40eed8d0460bdc153e4c082c 240 SUPERFAMILY SSF81606 12 239 7.98E-51 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D934_12560 92964abc40eed8d0460bdc153e4c082c 240 SMART SM00332 9 237 6.1E-12 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D934_12560 92964abc40eed8d0460bdc153e4c082c 240 SMART SM00331 18 239 3.2E-14 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D934_12560 92964abc40eed8d0460bdc153e4c082c 240 Pfam PF13672 Protein phosphatase 2C 27 202 3.5E-13 T 15-10-2018 D934_09465 50b2071d4004613768c6134f479fbfe7 141 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 9 132 1.1E-45 T 15-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 D934_09465 50b2071d4004613768c6134f479fbfe7 141 SUPERFAMILY SSF54637 7 137 9.19E-34 T 15-10-2018 IPR029069 HotDog domain superfamily D934_09465 50b2071d4004613768c6134f479fbfe7 141 PIRSF PIRSF003230 1 140 8.3E-38 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 D934_09465 50b2071d4004613768c6134f479fbfe7 141 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 13 127 1.9E-27 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 D934_09465 50b2071d4004613768c6134f479fbfe7 141 Gene3D G3DSA:3.10.129.10 2 139 3.6E-32 T 15-10-2018 D934_09465 50b2071d4004613768c6134f479fbfe7 141 Pfam PF03061 Thioesterase superfamily 24 107 5.1E-16 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 D934_13005 7d8c689b64ceb3d6af48fa8924c995ed 790 Gene3D G3DSA:2.70.98.10 39 326 1.7E-91 T 15-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 D934_13005 7d8c689b64ceb3d6af48fa8924c995ed 790 Pfam PF07971 Glycosyl hydrolase family 92 274 762 4.6E-162 T 15-10-2018 IPR012939 Glycosyl hydrolase family 92 D934_13005 7d8c689b64ceb3d6af48fa8924c995ed 790 SUPERFAMILY SSF48208 299 760 1.7E-25 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 D934_13005 7d8c689b64ceb3d6af48fa8924c995ed 790 Gene3D G3DSA:3.30.2080.10 327 784 4.4E-146 T 15-10-2018 D934_13005 7d8c689b64ceb3d6af48fa8924c995ed 790 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 42 766 5.7E-195 T 15-10-2018 IPR005887 Alpha-1,2-mannosidase, putative D934_06770 0ae84b9791bb9468a8b85efd0c38abf0 414 Pfam PF07484 Phage Tail Collar Domain 139 191 2.9E-12 T 15-10-2018 IPR011083 Phage tail collar domain D934_06770 0ae84b9791bb9468a8b85efd0c38abf0 414 SUPERFAMILY SSF88874 132 241 3.14E-16 T 15-10-2018 D934_06770 0ae84b9791bb9468a8b85efd0c38abf0 414 Gene3D G3DSA:4.10.1070.10 193 274 1.3E-5 T 15-10-2018 D934_06770 0ae84b9791bb9468a8b85efd0c38abf0 414 Gene3D G3DSA:3.90.1340.10 139 192 1.3E-5 T 15-10-2018 IPR037053 Phage tail collar domain superfamily D934_05515 6769d90930c134237bad93e30f48d314 429 Gene3D G3DSA:1.10.940.10 5 140 1.1E-29 T 15-10-2018 IPR035926 NusB-like superfamily D934_05515 6769d90930c134237bad93e30f48d314 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 311 322 - T 15-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 D934_05515 6769d90930c134237bad93e30f48d314 429 Pfam PF01029 NusB family 8 128 1.2E-16 T 15-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 D934_05515 6769d90930c134237bad93e30f48d314 429 SUPERFAMILY SSF48013 7 144 2.78E-25 T 15-10-2018 IPR035926 NusB-like superfamily D934_05515 6769d90930c134237bad93e30f48d314 429 SUPERFAMILY SSF53335 139 427 5.42E-67 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_05515 6769d90930c134237bad93e30f48d314 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 235 425 1.2E-52 T 15-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 D934_05515 6769d90930c134237bad93e30f48d314 429 Gene3D G3DSA:3.40.50.150 226 428 9.0E-58 T 15-10-2018 D934_05515 6769d90930c134237bad93e30f48d314 429 Gene3D G3DSA:3.30.70.1170 168 225 5.2E-18 T 15-10-2018 D934_05515 6769d90930c134237bad93e30f48d314 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 427 3.7E-102 T 15-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 D934_05515 6769d90930c134237bad93e30f48d314 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 312 324 1.1E-27 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D934_05515 6769d90930c134237bad93e30f48d314 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 410 427 1.1E-27 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D934_05515 6769d90930c134237bad93e30f48d314 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 217 231 1.1E-27 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D934_05515 6769d90930c134237bad93e30f48d314 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 246 256 1.1E-27 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D934_05515 6769d90930c134237bad93e30f48d314 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 362 378 1.1E-27 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D934_13525 9f8bbf06c52c6dab2c75e34ad908f6c7 643 SUPERFAMILY SSF53474 374 628 2.79E-44 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_13525 9f8bbf06c52c6dab2c75e34ad908f6c7 643 Gene3D G3DSA:3.40.50.1820 368 634 4.8E-46 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_13525 9f8bbf06c52c6dab2c75e34ad908f6c7 643 Pfam PF00326 Prolyl oligopeptidase family 471 628 5.1E-22 T 15-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 D934_08065 bd8845211fc16e40dc7fe078689181a0 249 Pfam PF02405 Permease MlaE 35 245 2.5E-65 T 15-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 D934_08065 bd8845211fc16e40dc7fe078689181a0 249 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 6 249 2.5E-69 T 15-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria D934_07185 8c3b22bc58cc28fbdac37034d062b5d5 114 Gene3D G3DSA:3.30.1330.40 1 114 1.3E-37 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 D934_07185 8c3b22bc58cc28fbdac37034d062b5d5 114 SUPERFAMILY SSF55298 3 113 1.57E-28 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 D934_07185 8c3b22bc58cc28fbdac37034d062b5d5 114 Pfam PF01042 Endoribonuclease L-PSP 9 113 1.4E-22 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 D934_01850 96358652c051e4c1b30f560192db045b 501 Pfam PF04715 Anthranilate synthase component I, N terminal region 37 180 1.7E-26 T 15-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_01850 96358652c051e4c1b30f560192db045b 501 SUPERFAMILY SSF56322 26 494 1.31E-154 T 15-10-2018 IPR005801 ADC synthase GO:0009058 D934_01850 96358652c051e4c1b30f560192db045b 501 Gene3D G3DSA:3.60.120.10 5 500 7.0E-173 T 15-10-2018 IPR005801 ADC synthase GO:0009058 D934_01850 96358652c051e4c1b30f560192db045b 501 PRINTS PR00095 Anthranilate synthase component I signature 334 347 3.0E-21 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_01850 96358652c051e4c1b30f560192db045b 501 PRINTS PR00095 Anthranilate synthase component I signature 348 361 3.0E-21 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_01850 96358652c051e4c1b30f560192db045b 501 PRINTS PR00095 Anthranilate synthase component I signature 443 457 3.0E-21 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_01850 96358652c051e4c1b30f560192db045b 501 PRINTS PR00095 Anthranilate synthase component I signature 428 442 3.0E-21 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_01850 96358652c051e4c1b30f560192db045b 501 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 37 494 2.0E-164 T 15-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D934_01850 96358652c051e4c1b30f560192db045b 501 Pfam PF00425 chorismate binding enzyme 233 486 5.2E-96 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal D934_12970 1c177af4a8ee356d842a037ad44789cd 155 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 16 137 3.3E-47 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 D934_12970 1c177af4a8ee356d842a037ad44789cd 155 SUPERFAMILY SSF51316 15 140 3.45E-52 T 15-10-2018 IPR011057 Mss4-like superfamily D934_12970 1c177af4a8ee356d842a037ad44789cd 155 Gene3D G3DSA:2.170.150.20 11 154 5.7E-56 T 15-10-2018 D934_12970 1c177af4a8ee356d842a037ad44789cd 155 Pfam PF01641 SelR domain 20 136 3.1E-46 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 D934_12970 1c177af4a8ee356d842a037ad44789cd 155 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 11 137 35.206 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 D934_01765 8f6c5cf35570e0c6c853a93d6f0318d6 266 SUPERFAMILY SSF56655 6 256 2.62E-73 T 15-10-2018 D934_01765 8f6c5cf35570e0c6c853a93d6f0318d6 266 Pfam PF00459 Inositol monophosphatase family 13 245 1.2E-44 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D934_01765 8f6c5cf35570e0c6c853a93d6f0318d6 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 15-10-2018 IPR020583 Inositol monophosphatase, metal-binding site D934_01765 8f6c5cf35570e0c6c853a93d6f0318d6 266 Gene3D G3DSA:3.40.190.80 155 258 8.8E-30 T 15-10-2018 D934_01765 8f6c5cf35570e0c6c853a93d6f0318d6 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 15-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 D934_01765 8f6c5cf35570e0c6c853a93d6f0318d6 266 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 254 9.1E-87 T 15-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 D934_01765 8f6c5cf35570e0c6c853a93d6f0318d6 266 Gene3D G3DSA:3.30.540.10 6 154 3.2E-43 T 15-10-2018 D934_01765 8f6c5cf35570e0c6c853a93d6f0318d6 266 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 8 256 40.144 T 15-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 D934_07905 18b4c8d5ca8c6bbff9ddb44b0b141805 113 SMART SM00530 57 111 2.3E-4 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_07905 18b4c8d5ca8c6bbff9ddb44b0b141805 113 SUPERFAMILY SSF47413 59 108 1.15E-8 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_07905 18b4c8d5ca8c6bbff9ddb44b0b141805 113 Gene3D G3DSA:1.10.260.40 59 112 1.2E-9 T 15-10-2018 D934_07905 18b4c8d5ca8c6bbff9ddb44b0b141805 113 Pfam PF01381 Helix-turn-helix 59 109 6.6E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_10155 6f3f989a55531ac473343202630ec69d 767 SMART SM00493 615 693 0.0037 T 15-10-2018 IPR006171 TOPRIM domain D934_10155 6f3f989a55531ac473343202630ec69d 767 Pfam PF13662 Toprim domain 617 688 1.0E-7 T 15-10-2018 IPR006171 TOPRIM domain D934_08840 ed0a2a4812c63bad4c11b9546594b11c 63 SUPERFAMILY SSF57802 7 60 5.55E-20 T 15-10-2018 D934_08840 ed0a2a4812c63bad4c11b9546594b11c 63 ProSitePatterns PS00202 Rubredoxin signature. 41 51 - T 15-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 D934_08840 ed0a2a4812c63bad4c11b9546594b11c 63 Gene3D G3DSA:2.20.28.10 3 62 4.4E-24 T 15-10-2018 D934_08840 ed0a2a4812c63bad4c11b9546594b11c 63 PRINTS PR00163 Rubredoxin signature 11 27 6.9E-6 T 15-10-2018 IPR024935 Rubredoxin domain GO:0005506 D934_08840 ed0a2a4812c63bad4c11b9546594b11c 63 PRINTS PR00163 Rubredoxin signature 41 57 6.9E-6 T 15-10-2018 IPR024935 Rubredoxin domain GO:0005506 D934_08840 ed0a2a4812c63bad4c11b9546594b11c 63 Pfam PF00301 Rubredoxin 12 57 7.4E-19 T 15-10-2018 IPR024935 Rubredoxin domain GO:0005506 D934_06885 c634b2c28b8227f509fcccdb46ef1aa4 346 Pfam PF06580 Histidine kinase 158 236 8.0E-21 T 15-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 D934_06885 c634b2c28b8227f509fcccdb46ef1aa4 346 SUPERFAMILY SSF55874 213 296 9.89E-7 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D934_08855 36f3f354cb3f6551932bae477a355975 136 Pfam PF03203 MerC mercury resistance protein 11 122 1.9E-21 T 15-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 D934_04870 41c2b74a0632214848e18687d07f92ed 379 SUPERFAMILY SSF55729 181 356 2.51E-32 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase D934_04870 41c2b74a0632214848e18687d07f92ed 379 Gene3D G3DSA:3.40.630.30 175 321 3.3E-5 T 15-10-2018 D934_04870 41c2b74a0632214848e18687d07f92ed 379 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 13 378 2.6E-133 T 15-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition D934_11835 ec1824848bacff81858fe89a00b9439f 304 Gene3D G3DSA:3.40.50.720 8 289 5.2E-84 T 15-10-2018 D934_11835 ec1824848bacff81858fe89a00b9439f 304 Gene3D G3DSA:3.90.25.10 177 296 5.2E-84 T 15-10-2018 D934_11835 ec1824848bacff81858fe89a00b9439f 304 SUPERFAMILY SSF51735 2 301 4.67E-63 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_11835 ec1824848bacff81858fe89a00b9439f 304 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 285 3.8E-42 T 15-10-2018 IPR016040 NAD(P)-binding domain D934_11335 8995fc48cecaf586dda359196ef093d8 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 267 1.4E-106 T 15-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 D934_11335 8995fc48cecaf586dda359196ef093d8 296 Pfam PF00483 Nucleotidyl transferase 12 271 3.6E-29 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 D934_11335 8995fc48cecaf586dda359196ef093d8 296 Gene3D G3DSA:3.90.550.10 1 293 6.5E-82 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_11335 8995fc48cecaf586dda359196ef093d8 296 SUPERFAMILY SSF53448 5 281 4.73E-62 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D934_07965 cc4f8b73497776ff220634a946e75eb8 74 Pfam PF04324 BFD-like [2Fe-2S] binding domain 5 51 1.7E-9 T 15-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain D934_07965 cc4f8b73497776ff220634a946e75eb8 74 Gene3D G3DSA:1.10.10.1100 4 57 8.9E-12 T 15-10-2018 D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 Gene3D G3DSA:3.40.50.720 1 190 1.6E-53 T 15-10-2018 D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 SUPERFAMILY SSF51735 5 183 1.08E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 160 7.4E-49 T 15-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 PIRSF PIRSF000114 1 335 9.5E-95 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 320 2.5E-46 T 15-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 325 38.122 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 Gene3D G3DSA:1.10.1040.10 192 340 6.5E-46 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 1.8E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 1.8E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 1.8E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 1.8E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 1.8E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 1.8E-42 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D934_07310 1c25dd4c3ff4c834ced17c6938d3f29f 346 SUPERFAMILY SSF48179 182 337 1.7E-50 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D934_02825 4bdd5b012a97a624a769f495b23658cc 71 Pfam PF07896 Protein of unknown function (DUF1674) 37 71 1.9E-13 T 15-10-2018 IPR012875 Protein of unknown function DUF1674 D934_10500 e4c6e95a8591a4c19923186f2f7ea4a3 303 Pfam PF03547 Membrane transport protein 152 293 2.1E-6 T 15-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 D934_06105 df890d52e018101e39d52ee44cb739f0 208 SUPERFAMILY SSF52499 2 201 9.03E-43 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 D934_06105 df890d52e018101e39d52ee44cb739f0 208 Gene3D G3DSA:3.40.50.850 1 207 8.9E-63 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 D934_06105 df890d52e018101e39d52ee44cb739f0 208 Pfam PF00857 Isochorismatase family 7 178 8.5E-21 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 D934_04255 34d8290c2ce305198f00669d750739b2 387 Pfam PF02628 Cytochrome oxidase assembly protein 137 377 1.4E-45 T 15-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 D934_04255 34d8290c2ce305198f00669d750739b2 387 Pfam PF02628 Cytochrome oxidase assembly protein 15 122 2.2E-19 T 15-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 D934_06405 6381dec71853c29016183cff47092b31 396 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 113 285 1.2E-34 T 15-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain D934_06405 6381dec71853c29016183cff47092b31 396 Pfam PF17482 Phage tail sheath C-terminal domain 286 387 1.4E-19 T 15-10-2018 IPR020287 Tail sheath protein, C-terminal domain D934_08745 cb5acc2dff8bcc8a97314ca1b992dd07 400 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 341 350 - T 15-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 D934_08745 cb5acc2dff8bcc8a97314ca1b992dd07 400 Pfam PF00067 Cytochrome P450 80 368 7.4E-29 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 D934_08745 cb5acc2dff8bcc8a97314ca1b992dd07 400 SUPERFAMILY SSF48264 9 398 4.19E-86 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 D934_08745 cb5acc2dff8bcc8a97314ca1b992dd07 400 PRINTS PR00359 B-class P450 signature 339 348 1.0E-40 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D934_08745 cb5acc2dff8bcc8a97314ca1b992dd07 400 PRINTS PR00359 B-class P450 signature 348 359 1.0E-40 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D934_08745 cb5acc2dff8bcc8a97314ca1b992dd07 400 PRINTS PR00359 B-class P450 signature 131 147 1.0E-40 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D934_08745 cb5acc2dff8bcc8a97314ca1b992dd07 400 PRINTS PR00359 B-class P450 signature 192 214 1.0E-40 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D934_08745 cb5acc2dff8bcc8a97314ca1b992dd07 400 PRINTS PR00359 B-class P450 signature 318 333 1.0E-40 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D934_08745 cb5acc2dff8bcc8a97314ca1b992dd07 400 PRINTS PR00359 B-class P450 signature 85 96 1.0E-40 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D934_08745 cb5acc2dff8bcc8a97314ca1b992dd07 400 PRINTS PR00359 B-class P450 signature 273 284 1.0E-40 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D934_08745 cb5acc2dff8bcc8a97314ca1b992dd07 400 PRINTS PR00359 B-class P450 signature 290 317 1.0E-40 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D934_08745 cb5acc2dff8bcc8a97314ca1b992dd07 400 Gene3D G3DSA:1.10.630.10 1 400 3.2E-111 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 D934_10550 2de734e5cf83b579d65f779b1824075c 300 Pfam PF08340 Domain of unknown function (DUF1732) 216 300 1.0E-34 T 15-10-2018 IPR013551 Domain of unknown function DUF1732 D934_10550 2de734e5cf83b579d65f779b1824075c 300 Pfam PF03755 YicC-like family, N-terminal region 15 166 1.6E-34 T 15-10-2018 IPR013527 YicC-like, N-terminal D934_10550 2de734e5cf83b579d65f779b1824075c 300 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 14 300 6.2E-77 T 15-10-2018 IPR005229 Conserved hypothetical protein CHP00255 D934_08735 344022794fa2948d3ce1e398622060bc 151 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 28 149 4.5E-48 T 15-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 D934_08735 344022794fa2948d3ce1e398622060bc 151 Pfam PF01042 Endoribonuclease L-PSP 33 149 6.3E-39 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 D934_08735 344022794fa2948d3ce1e398622060bc 151 SUPERFAMILY SSF55298 24 150 1.54E-44 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 D934_08735 344022794fa2948d3ce1e398622060bc 151 Gene3D G3DSA:3.30.1330.40 24 151 8.2E-50 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 D934_06320 1e8d6ba8eb11549a55a940cac6cf7989 74 ProDom PD272324 XF1567/XF1672 1 68 7.0E-29 T 15-10-2018 IPR020247 Uncharacterised protein family XF1567 D934_05180 1e8d6ba8eb11549a55a940cac6cf7989 74 ProDom PD272324 XF1567/XF1672 1 68 7.0E-29 T 15-10-2018 IPR020247 Uncharacterised protein family XF1567 D934_12630 7a8a054b6200d49a23b821b240e26851 343 Gene3D G3DSA:1.10.8.60 144 212 1.3E-20 T 15-10-2018 D934_12630 7a8a054b6200d49a23b821b240e26851 343 Gene3D G3DSA:3.40.50.300 1 138 2.5E-38 T 15-10-2018 D934_12630 7a8a054b6200d49a23b821b240e26851 343 Gene3D G3DSA:1.20.272.10 214 341 1.3E-22 T 15-10-2018 D934_12630 7a8a054b6200d49a23b821b240e26851 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 333 1.4E-95 T 15-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 D934_12630 7a8a054b6200d49a23b821b240e26851 343 SUPERFAMILY SSF48019 212 334 2.21E-22 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 D934_12630 7a8a054b6200d49a23b821b240e26851 343 SUPERFAMILY SSF52540 2 210 2.74E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_12630 7a8a054b6200d49a23b821b240e26851 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 1.3E-21 T 15-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 D934_01510 f8d52b1d2511cc37f5d03642dae9fab8 361 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 349 7.9E-71 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 D934_01510 f8d52b1d2511cc37f5d03642dae9fab8 361 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 349 1.2E-110 T 15-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 D934_06325 f5731b8bebb48119ca36b7ab178e69bf 177 Gene3D G3DSA:1.10.10.10 9 76 1.1E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_06325 f5731b8bebb48119ca36b7ab178e69bf 177 Pfam PF07471 Phage DNA packaging protein Nu1 9 158 2.5E-52 T 15-10-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit D934_06325 f5731b8bebb48119ca36b7ab178e69bf 177 SUPERFAMILY SSF46955 12 63 1.83E-8 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily D934_07050 6f4923d2b4493b01b64b23f192b40ae6 261 SUPERFAMILY SSF51306 119 252 3.27E-22 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily D934_07050 6f4923d2b4493b01b64b23f192b40ae6 261 SUPERFAMILY SSF47413 33 89 2.48E-5 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_07050 6f4923d2b4493b01b64b23f192b40ae6 261 Gene3D G3DSA:2.10.109.10 127 256 4.0E-10 T 15-10-2018 D934_07050 6f4923d2b4493b01b64b23f192b40ae6 261 Gene3D G3DSA:1.10.260.40 29 90 4.8E-6 T 15-10-2018 D934_07050 6f4923d2b4493b01b64b23f192b40ae6 261 Pfam PF00717 Peptidase S24-like 167 227 1.5E-8 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D934_03590 aa3d8eae98ca9e13e49b18694af72d0a 54 Pfam PF00471 Ribosomal protein L33 7 52 5.8E-18 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03590 aa3d8eae98ca9e13e49b18694af72d0a 54 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 54 2.3E-24 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03590 aa3d8eae98ca9e13e49b18694af72d0a 54 ProSitePatterns PS00582 Ribosomal protein L33 signature. 20 39 - T 15-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_03590 aa3d8eae98ca9e13e49b18694af72d0a 54 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 4 52 14.671 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03590 aa3d8eae98ca9e13e49b18694af72d0a 54 Gene3D G3DSA:2.20.28.120 1 54 6.8E-27 T 15-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03590 aa3d8eae98ca9e13e49b18694af72d0a 54 SUPERFAMILY SSF57829 3 52 1.71E-18 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 D934_13095 926ca92092de13947c3f31a3fd464a44 557 SUPERFAMILY SSF53187 28 531 5.88E-61 T 15-10-2018 D934_13095 926ca92092de13947c3f31a3fd464a44 557 Gene3D G3DSA:3.40.630.10 250 531 8.7E-49 T 15-10-2018 D934_13095 926ca92092de13947c3f31a3fd464a44 557 SUPERFAMILY SSF52025 138 221 1.03E-7 T 15-10-2018 D934_13095 926ca92092de13947c3f31a3fd464a44 557 Pfam PF04389 Peptidase family M28 305 520 8.3E-48 T 15-10-2018 IPR007484 Peptidase M28 D934_13095 926ca92092de13947c3f31a3fd464a44 557 Pfam PF02225 PA domain 139 221 7.2E-7 T 15-10-2018 IPR003137 PA domain D934_11800 204c50c441370f4399c7e886d58aa581 95 PRINTS PR00297 10kDa chaperonin signature 60 72 2.7E-32 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D934_11800 204c50c441370f4399c7e886d58aa581 95 PRINTS PR00297 10kDa chaperonin signature 81 94 2.7E-32 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D934_11800 204c50c441370f4399c7e886d58aa581 95 PRINTS PR00297 10kDa chaperonin signature 25 46 2.7E-32 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D934_11800 204c50c441370f4399c7e886d58aa581 95 PRINTS PR00297 10kDa chaperonin signature 3 18 2.7E-32 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D934_11800 204c50c441370f4399c7e886d58aa581 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 15-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 D934_11800 204c50c441370f4399c7e886d58aa581 95 SMART SM00883 2 94 1.1E-50 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D934_11800 204c50c441370f4399c7e886d58aa581 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 9.3E-32 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D934_11800 204c50c441370f4399c7e886d58aa581 95 Gene3D G3DSA:2.30.33.40 1 95 1.7E-37 T 15-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 D934_11800 204c50c441370f4399c7e886d58aa581 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 25.222 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D934_11800 204c50c441370f4399c7e886d58aa581 95 SUPERFAMILY SSF50129 1 94 4.83E-31 T 15-10-2018 IPR011032 GroES-like superfamily D934_00300 8b9b866dbf09f7d74b5a710fdfb9a194 361 Gene3D G3DSA:3.30.70.1660 112 343 2.4E-94 T 15-10-2018 D934_00300 8b9b866dbf09f7d74b5a710fdfb9a194 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 D934_00300 8b9b866dbf09f7d74b5a710fdfb9a194 361 Pfam PF00472 RF-1 domain 213 321 1.8E-41 T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 D934_00300 8b9b866dbf09f7d74b5a710fdfb9a194 361 Gene3D G3DSA:3.30.160.20 210 297 2.4E-94 T 15-10-2018 D934_00300 8b9b866dbf09f7d74b5a710fdfb9a194 361 Pfam PF03462 PCRF domain 13 203 3.9E-70 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 D934_00300 8b9b866dbf09f7d74b5a710fdfb9a194 361 SUPERFAMILY SSF75620 12 354 9.94E-129 T 15-10-2018 D934_00300 8b9b866dbf09f7d74b5a710fdfb9a194 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 3.8E-155 T 15-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 D934_00300 8b9b866dbf09f7d74b5a710fdfb9a194 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 358 39.701 T 15-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 D934_00300 8b9b866dbf09f7d74b5a710fdfb9a194 361 SMART SM00937 63 178 1.7E-63 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 D934_11280 4ddf19f4122c8d73f8465f758d2d1a88 109 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 33 109 3.0E-37 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_11280 4ddf19f4122c8d73f8465f758d2d1a88 109 Pfam PF01649 Ribosomal protein S20 22 104 9.3E-26 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_11280 4ddf19f4122c8d73f8465f758d2d1a88 109 SUPERFAMILY SSF46992 23 106 1.83E-29 T 15-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_11280 4ddf19f4122c8d73f8465f758d2d1a88 109 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 21 105 16.986 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_11280 4ddf19f4122c8d73f8465f758d2d1a88 109 TIGRFAM TIGR00029 S20: ribosomal protein bS20 22 106 5.8E-27 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_11280 4ddf19f4122c8d73f8465f758d2d1a88 109 Gene3D G3DSA:1.20.58.110 21 107 5.0E-27 T 15-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_00115 f96e2ee700cc7584b88d47c84892116f 133 Pfam PF00072 Response regulator receiver domain 9 115 7.1E-8 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_00115 f96e2ee700cc7584b88d47c84892116f 133 SUPERFAMILY SSF52172 5 121 4.84E-18 T 15-10-2018 IPR011006 CheY-like superfamily D934_00115 f96e2ee700cc7584b88d47c84892116f 133 Gene3D G3DSA:3.40.50.2300 5 125 1.8E-27 T 15-10-2018 D934_00115 f96e2ee700cc7584b88d47c84892116f 133 SMART SM00448 7 115 1.3E-6 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_05585 b3d07eb5d12cacf33ae528a6b1b7b977 138 Gene3D G3DSA:2.30.30.220 1 123 2.4E-42 T 15-10-2018 IPR036760 SspB-like superfamily D934_05585 b3d07eb5d12cacf33ae528a6b1b7b977 138 PIRSF PIRSF005276 1 138 1.1E-52 T 15-10-2018 IPR007481 Stringent starvation protein B D934_05585 b3d07eb5d12cacf33ae528a6b1b7b977 138 SUPERFAMILY SSF101738 1 114 1.06E-44 T 15-10-2018 IPR036760 SspB-like superfamily D934_05585 b3d07eb5d12cacf33ae528a6b1b7b977 138 Pfam PF04386 Stringent starvation protein B 4 138 2.2E-31 T 15-10-2018 IPR007481 Stringent starvation protein B D934_08045 dcaa5ddcc0c390dfdb4953b9e3a80baf 350 PRINTS PR01805 VacJ lipoprotein signature 116 129 1.5E-22 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 D934_08045 dcaa5ddcc0c390dfdb4953b9e3a80baf 350 PRINTS PR01805 VacJ lipoprotein signature 184 201 1.5E-22 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 D934_08045 dcaa5ddcc0c390dfdb4953b9e3a80baf 350 PRINTS PR01805 VacJ lipoprotein signature 220 237 1.5E-22 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 D934_08045 dcaa5ddcc0c390dfdb4953b9e3a80baf 350 PRINTS PR01805 VacJ lipoprotein signature 133 149 1.5E-22 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 D934_08045 dcaa5ddcc0c390dfdb4953b9e3a80baf 350 Pfam PF04333 MlaA lipoprotein 115 306 4.4E-67 T 15-10-2018 IPR007428 MlaA lipoprotein GO:0016020 D934_11410 f1763f8e91fa709b0a6327af8a2ba1f9 293 SUPERFAMILY SSF161098 54 280 6.28E-64 T 15-10-2018 IPR035906 MetI-like superfamily D934_11410 f1763f8e91fa709b0a6327af8a2ba1f9 293 Gene3D G3DSA:1.10.3720.10 50 291 3.7E-78 T 15-10-2018 IPR035906 MetI-like superfamily D934_11410 f1763f8e91fa709b0a6327af8a2ba1f9 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 279 1.7E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D934_04955 4216075878d1775f810f638a4eea20d9 346 Pfam PF01380 SIS domain 208 287 1.6E-14 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D934_04955 4216075878d1775f810f638a4eea20d9 346 Pfam PF01380 SIS domain 53 174 2.4E-17 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D934_04955 4216075878d1775f810f638a4eea20d9 346 Gene3D G3DSA:3.40.50.10490 10 199 2.2E-42 T 15-10-2018 D934_04955 4216075878d1775f810f638a4eea20d9 346 SUPERFAMILY SSF53697 15 344 7.35E-69 T 15-10-2018 D934_04955 4216075878d1775f810f638a4eea20d9 346 Gene3D G3DSA:3.40.50.10490 204 331 1.2E-40 T 15-10-2018 D934_02030 2be53c6da4b561c609519c0806d02844 304 Pfam PF00892 EamA-like transporter family 148 290 2.3E-13 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D934_02030 2be53c6da4b561c609519c0806d02844 304 Pfam PF00892 EamA-like transporter family 16 139 7.4E-10 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D934_02030 2be53c6da4b561c609519c0806d02844 304 SUPERFAMILY SSF103481 195 290 1.83E-8 T 15-10-2018 D934_02030 2be53c6da4b561c609519c0806d02844 304 SUPERFAMILY SSF103481 45 140 4.05E-8 T 15-10-2018 D934_12090 c4e282c030e9a24ad2dd0543637e3f4a 1041 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 193 1.3E-15 T 15-10-2018 IPR012910 TonB-dependent receptor, plug domain D934_12090 c4e282c030e9a24ad2dd0543637e3f4a 1041 Pfam PF00593 TonB dependent receptor 477 1039 3.3E-32 T 15-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D934_12090 c4e282c030e9a24ad2dd0543637e3f4a 1041 SUPERFAMILY SSF56935 60 1040 2.2E-64 T 15-10-2018 D934_12090 c4e282c030e9a24ad2dd0543637e3f4a 1041 Gene3D G3DSA:2.170.130.10 53 197 3.1E-25 T 15-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D934_13235 8a5f0209e945ecdf6e89ee3592a72bad 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 1.0E-18 T 15-10-2018 IPR010035 ThiS, thiamine-biosynthesis D934_13235 8a5f0209e945ecdf6e89ee3592a72bad 66 Gene3D G3DSA:3.10.20.30 1 66 1.6E-20 T 15-10-2018 IPR012675 Beta-grasp domain superfamily D934_13235 8a5f0209e945ecdf6e89ee3592a72bad 66 SUPERFAMILY SSF54285 1 66 8.14E-17 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp D934_13235 8a5f0209e945ecdf6e89ee3592a72bad 66 Pfam PF02597 ThiS family 3 66 1.7E-14 T 15-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 D934_11795 4ba7d404dd0c2fb77770f6353975e625 112 SUPERFAMILY SSF54913 2 106 2.0E-33 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta D934_11795 4ba7d404dd0c2fb77770f6353975e625 112 Gene3D G3DSA:3.30.70.120 1 112 2.5E-39 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal D934_11795 4ba7d404dd0c2fb77770f6353975e625 112 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 5.1E-30 T 15-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 D934_09250 b0e0fef37d4da3d21263b658ca95fa32 77 Pfam PF10389 Bacteriophage coat protein B 32 77 7.2E-15 T 15-10-2018 IPR008020 Capsid protein G8P D934_09250 b0e0fef37d4da3d21263b658ca95fa32 77 SUPERFAMILY SSF57987 32 77 9.15E-20 T 15-10-2018 D934_04845 06c1f594e42d39771354c9adf82759ad 106 SUPERFAMILY SSF54736 21 105 9.42E-32 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D934_04845 06c1f594e42d39771354c9adf82759ad 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 9.1E-33 T 15-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 D934_04845 06c1f594e42d39771354c9adf82759ad 106 Gene3D G3DSA:3.30.1390.10 1 106 1.1E-40 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D934_04845 06c1f594e42d39771354c9adf82759ad 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 16 101 27.762 T 15-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS D934_10310 ea56ee022616e8f0075af777bda2efa9 422 Gene3D G3DSA:1.10.10.2510 230 403 2.2E-33 T 15-10-2018 D934_10310 ea56ee022616e8f0075af777bda2efa9 422 SMART SM00558 111 240 6.9E-4 T 15-10-2018 IPR003347 JmjC domain D934_10310 ea56ee022616e8f0075af777bda2efa9 422 Pfam PF08007 Cupin superfamily protein 25 337 4.7E-105 T 15-10-2018 IPR003347 JmjC domain D934_10310 ea56ee022616e8f0075af777bda2efa9 422 SUPERFAMILY SSF51197 22 313 1.51E-66 T 15-10-2018 D934_10310 ea56ee022616e8f0075af777bda2efa9 422 Gene3D G3DSA:2.60.120.650 11 229 1.8E-81 T 15-10-2018 D934_02595 ec515870702a4efaa1343daf5fa24312 1137 SUPERFAMILY SSF103647 449 550 7.85E-7 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 D934_02595 ec515870702a4efaa1343daf5fa24312 1137 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1062 1100 2.0E-10 T 15-10-2018 IPR010566 Haemolysin-type calcium binding-related D934_02595 ec515870702a4efaa1343daf5fa24312 1137 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 947 965 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site D934_02595 ec515870702a4efaa1343daf5fa24312 1137 Gene3D G3DSA:2.150.10.10 977 1114 3.8E-34 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_02595 ec515870702a4efaa1343daf5fa24312 1137 Gene3D G3DSA:2.150.10.10 898 976 7.3E-16 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_02595 ec515870702a4efaa1343daf5fa24312 1137 SUPERFAMILY SSF51120 983 1098 3.79E-17 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_02595 ec515870702a4efaa1343daf5fa24312 1137 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 956 974 - T 15-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site D934_02595 ec515870702a4efaa1343daf5fa24312 1137 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 959 976 4.4E-5 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_02595 ec515870702a4efaa1343daf5fa24312 1137 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 978 994 0.24 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_02595 ec515870702a4efaa1343daf5fa24312 1137 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 942 958 0.094 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_02595 ec515870702a4efaa1343daf5fa24312 1137 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 924 940 9.3 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_02595 ec515870702a4efaa1343daf5fa24312 1137 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1028 1043 16.0 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_02595 ec515870702a4efaa1343daf5fa24312 1137 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1006 1022 1.0 T 15-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 D934_02595 ec515870702a4efaa1343daf5fa24312 1137 PRINTS PR00313 NodO calcium binding signature 957 968 1.7E-10 T 15-10-2018 D934_02595 ec515870702a4efaa1343daf5fa24312 1137 PRINTS PR00313 NodO calcium binding signature 987 995 1.7E-10 T 15-10-2018 D934_02595 ec515870702a4efaa1343daf5fa24312 1137 PRINTS PR00313 NodO calcium binding signature 1007 1016 1.7E-10 T 15-10-2018 D934_02595 ec515870702a4efaa1343daf5fa24312 1137 PRINTS PR00313 NodO calcium binding signature 969 977 1.7E-10 T 15-10-2018 D934_02595 ec515870702a4efaa1343daf5fa24312 1137 SUPERFAMILY SSF51120 923 999 4.58E-20 T 15-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D934_10105 257d39fc03defb369e3ac728133433ac 97 Gene3D G3DSA:1.10.260.40 1 81 1.9E-27 T 15-10-2018 D934_10105 257d39fc03defb369e3ac728133433ac 97 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 2 82 3.6E-30 T 15-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 D934_10105 257d39fc03defb369e3ac728133433ac 97 SUPERFAMILY SSF47413 7 88 1.38E-19 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_08110 eed63a05c1a17283b939a90bb2cf3bb3 114 SUPERFAMILY SSF53335 36 112 1.16E-9 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_08110 eed63a05c1a17283b939a90bb2cf3bb3 114 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 61 66 - T 15-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 D934_08110 eed63a05c1a17283b939a90bb2cf3bb3 114 Gene3D G3DSA:3.40.50.150 29 113 4.5E-9 T 15-10-2018 D934_02160 1745e5208df8eac3f4f9269521d460c2 455 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 7.8E-40 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D934_02160 1745e5208df8eac3f4f9269521d460c2 455 PRINTS PR00481 Cytosol aminopeptidase signature 328 343 7.8E-40 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D934_02160 1745e5208df8eac3f4f9269521d460c2 455 PRINTS PR00481 Cytosol aminopeptidase signature 219 236 7.8E-40 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D934_02160 1745e5208df8eac3f4f9269521d460c2 455 PRINTS PR00481 Cytosol aminopeptidase signature 241 262 7.8E-40 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D934_02160 1745e5208df8eac3f4f9269521d460c2 455 PRINTS PR00481 Cytosol aminopeptidase signature 300 320 7.8E-40 T 15-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D934_02160 1745e5208df8eac3f4f9269521d460c2 455 Gene3D G3DSA:3.40.220.10 7 131 3.4E-29 T 15-10-2018 D934_02160 1745e5208df8eac3f4f9269521d460c2 455 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 146 428 1.4E-99 T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D934_02160 1745e5208df8eac3f4f9269521d460c2 455 Gene3D G3DSA:3.40.630.10 134 454 2.1E-116 T 15-10-2018 D934_02160 1745e5208df8eac3f4f9269521d460c2 455 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 304 311 - T 15-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D934_02160 1745e5208df8eac3f4f9269521d460c2 455 SUPERFAMILY SSF53187 139 453 1.07E-102 T 15-10-2018 D934_09440 c0036ac47d2e79a0634d7f1eef923071 179 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 3 176 28.76 T 15-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 D934_09440 c0036ac47d2e79a0634d7f1eef923071 179 Gene3D G3DSA:3.30.1330.60 61 178 4.2E-35 T 15-10-2018 IPR036737 OmpA-like domain superfamily D934_09440 c0036ac47d2e79a0634d7f1eef923071 179 Pfam PF00691 OmpA family 75 170 4.6E-17 T 15-10-2018 IPR006665 OmpA-like domain D934_09440 c0036ac47d2e79a0634d7f1eef923071 179 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 74 176 7.5E-43 T 15-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 D934_09440 c0036ac47d2e79a0634d7f1eef923071 179 PRINTS PR01021 OMPA domain signature 76 98 4.0E-14 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D934_09440 c0036ac47d2e79a0634d7f1eef923071 179 PRINTS PR01021 OMPA domain signature 121 137 4.0E-14 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D934_09440 c0036ac47d2e79a0634d7f1eef923071 179 PRINTS PR01021 OMPA domain signature 106 121 4.0E-14 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D934_09440 c0036ac47d2e79a0634d7f1eef923071 179 SUPERFAMILY SSF103088 57 175 1.15E-32 T 15-10-2018 IPR036737 OmpA-like domain superfamily D934_04780 805d89b5ed9a14ccf1ceed850df539b6 297 SUPERFAMILY SSF81324 30 244 5.36E-52 T 15-10-2018 D934_04780 805d89b5ed9a14ccf1ceed850df539b6 297 Gene3D G3DSA:1.10.287.70 34 246 1.6E-52 T 15-10-2018 D934_04780 805d89b5ed9a14ccf1ceed850df539b6 297 PRINTS PR00169 Potassium channel signature 131 157 3.2E-26 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 D934_04780 805d89b5ed9a14ccf1ceed850df539b6 297 PRINTS PR00169 Potassium channel signature 95 115 3.2E-26 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 D934_04780 805d89b5ed9a14ccf1ceed850df539b6 297 PRINTS PR00169 Potassium channel signature 69 92 3.2E-26 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 D934_04780 805d89b5ed9a14ccf1ceed850df539b6 297 PRINTS PR00169 Potassium channel signature 189 211 3.2E-26 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 D934_04780 805d89b5ed9a14ccf1ceed850df539b6 297 PRINTS PR00169 Potassium channel signature 27 55 3.2E-26 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 D934_04780 805d89b5ed9a14ccf1ceed850df539b6 297 PRINTS PR00169 Potassium channel signature 218 244 3.2E-26 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 D934_04780 805d89b5ed9a14ccf1ceed850df539b6 297 Pfam PF00520 Ion transport protein 34 239 2.0E-28 T 15-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 D934_11385 1d62e923f2855b9da247fd7e47e583fb 363 SUPERFAMILY SSF55909 16 358 3.57E-113 T 15-10-2018 D934_11385 1d62e923f2855b9da247fd7e47e583fb 363 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 24 357 1.6E-107 T 15-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 D934_11385 1d62e923f2855b9da247fd7e47e583fb 363 Gene3D G3DSA:3.75.10.10 22 363 5.3E-114 T 15-10-2018 D934_06425 e1add6c205f43dbbd7b97a604e4a9fac 739 Pfam PF10145 Phage-related minor tail protein 162 373 8.0E-33 T 15-10-2018 IPR010090 Phage tail tape measure protein D934_06425 e1add6c205f43dbbd7b97a604e4a9fac 739 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 117 481 8.6E-66 T 15-10-2018 IPR010090 Phage tail tape measure protein D934_03765 1e77fa4e00ed9dd13a0481dfd23bea42 398 Gene3D G3DSA:3.10.310.10 181 373 2.5E-141 T 15-10-2018 D934_03765 1e77fa4e00ed9dd13a0481dfd23bea42 398 SUPERFAMILY SSF54506 4 182 2.04E-67 T 15-10-2018 D934_03765 1e77fa4e00ed9dd13a0481dfd23bea42 398 Pfam PF04303 PrpF protein 6 390 1.8E-181 T 15-10-2018 IPR007400 PrpF protein D934_03765 1e77fa4e00ed9dd13a0481dfd23bea42 398 Gene3D G3DSA:3.10.310.10 11 387 2.5E-141 T 15-10-2018 D934_03765 1e77fa4e00ed9dd13a0481dfd23bea42 398 SUPERFAMILY SSF54506 190 391 5.02E-69 T 15-10-2018 D934_03765 1e77fa4e00ed9dd13a0481dfd23bea42 398 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 393 1.5E-230 T 15-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 D934_01235 68d1b39b745b3027e1c372ef15cf0066 265 SUPERFAMILY SSF56752 13 246 4.71E-38 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 D934_01235 68d1b39b745b3027e1c372ef15cf0066 265 Gene3D G3DSA:3.30.470.10 9 111 9.9E-7 T 15-10-2018 D934_01235 68d1b39b745b3027e1c372ef15cf0066 265 Pfam PF01063 Amino-transferase class IV 25 238 2.8E-34 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 D934_01235 68d1b39b745b3027e1c372ef15cf0066 265 Gene3D G3DSA:3.20.10.10 117 262 7.6E-20 T 15-10-2018 D934_10925 4dcff8b979970bb92cce14ad40d33462 126 Gene3D G3DSA:1.10.3830.10 8 125 1.7E-36 T 15-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 D934_10925 4dcff8b979970bb92cce14ad40d33462 126 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 121 2.3E-32 T 15-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 Gene3D G3DSA:3.30.559.10 302 551 5.9E-94 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 SUPERFAMILY SSF51230 3 89 6.52E-22 T 15-10-2018 IPR011053 Single hybrid motif D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 135 164 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 Gene3D G3DSA:2.40.50.100 110 188 1.5E-19 T 15-10-2018 D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 SUPERFAMILY SSF47005 237 279 7.06E-11 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 Pfam PF02817 e3 binding domain 241 275 1.3E-13 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 90 551 2.0E-230 T 15-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 Gene3D G3DSA:2.40.50.100 7 82 5.5E-20 T 15-10-2018 D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 Pfam PF00364 Biotin-requiring enzyme 9 77 1.1E-20 T 15-10-2018 IPR000089 Biotin/lipoyl attachment D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 Pfam PF00364 Biotin-requiring enzyme 113 184 2.0E-20 T 15-10-2018 IPR000089 Biotin/lipoyl attachment D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 SUPERFAMILY SSF51230 111 192 1.07E-20 T 15-10-2018 IPR011053 Single hybrid motif D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 Gene3D G3DSA:4.10.320.10 241 283 2.1E-15 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 SUPERFAMILY SSF52777 306 551 1.25E-81 T 15-10-2018 D934_12880 65e1578b9f1cae62ed4a769626db1bb5 551 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 317 550 3.8E-80 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 D934_13795 aaeaa4058b7679e5ccdb99c18cd12563 121 Pfam PF01797 Transposase IS200 like 1 117 1.7E-42 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D934_13795 aaeaa4058b7679e5ccdb99c18cd12563 121 SUPERFAMILY SSF143422 1 118 2.88E-44 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D934_13795 aaeaa4058b7679e5ccdb99c18cd12563 121 SMART SM01321 2 117 1.0E-40 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D934_13795 aaeaa4058b7679e5ccdb99c18cd12563 121 Gene3D G3DSA:3.30.70.1290 1 121 2.7E-41 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D934_00110 0d2d0823264235d620b767c07d03a2bd 298 Gene3D G3DSA:3.40.250.10 142 292 7.0E-29 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily D934_00110 0d2d0823264235d620b767c07d03a2bd 298 Gene3D G3DSA:3.30.70.100 34 136 1.2E-28 T 15-10-2018 D934_00110 0d2d0823264235d620b767c07d03a2bd 298 Hamap MF_00469 UPF0176 protein YceA [yceA]. 42 297 31.988 T 15-10-2018 IPR020936 Uncharacterised protein family UPF0176 D934_00110 0d2d0823264235d620b767c07d03a2bd 298 SUPERFAMILY SSF52821 143 275 2.19E-21 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily D934_00110 0d2d0823264235d620b767c07d03a2bd 298 SMART SM00450 159 260 4.8E-8 T 15-10-2018 IPR001763 Rhodanese-like domain D934_11985 bd728921f5e6907ce46a71fd581fdcad 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 172 49.281 T 15-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D934_11985 bd728921f5e6907ce46a71fd581fdcad 172 Pfam PF07977 FabA-like domain 28 158 1.0E-50 T 15-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D934_11985 bd728921f5e6907ce46a71fd581fdcad 172 Gene3D G3DSA:3.10.129.10 1 172 5.9E-60 T 15-10-2018 D934_11985 bd728921f5e6907ce46a71fd581fdcad 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 172 5.1E-85 T 15-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D934_11985 bd728921f5e6907ce46a71fd581fdcad 172 SUPERFAMILY SSF54637 2 170 9.94E-53 T 15-10-2018 IPR029069 HotDog domain superfamily D934_03695 9a65cf9c62f7c44abfce49326511530e 160 SUPERFAMILY SSF55781 13 158 8.94E-42 T 15-10-2018 D934_03695 9a65cf9c62f7c44abfce49326511530e 160 Pfam PF13185 GAF domain 55 153 2.3E-10 T 15-10-2018 IPR003018 GAF domain GO:0005515 D934_03695 9a65cf9c62f7c44abfce49326511530e 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 15-10-2018 IPR000614 Free Met sulfoxide reductase conserved site D934_03695 9a65cf9c62f7c44abfce49326511530e 160 Gene3D G3DSA:3.30.450.40 10 160 3.4E-61 T 15-10-2018 IPR029016 GAF-like domain superfamily D934_11255 07f4e64909ba7c16d1ed9ecc64528033 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 37.808 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 D934_11255 07f4e64909ba7c16d1ed9ecc64528033 316 Gene3D G3DSA:3.40.1010.20 6 283 2.7E-109 T 15-10-2018 D934_11255 07f4e64909ba7c16d1ed9ecc64528033 316 Gene3D G3DSA:3.40.50.11270 12 96 2.7E-109 T 15-10-2018 D934_11255 07f4e64909ba7c16d1ed9ecc64528033 316 Gene3D G3DSA:3.40.1010.20 97 198 2.7E-109 T 15-10-2018 D934_11255 07f4e64909ba7c16d1ed9ecc64528033 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 3.4E-98 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 D934_11255 07f4e64909ba7c16d1ed9ecc64528033 316 Pfam PF02401 LytB protein 3 284 1.2E-90 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 D934_04280 447682ea2f2b17acf9afdc60eb1497d1 649 Gene3D G3DSA:1.10.530.10 471 636 8.1E-49 T 15-10-2018 D934_04280 447682ea2f2b17acf9afdc60eb1497d1 649 SUPERFAMILY SSF53955 477 634 1.2E-48 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_04280 447682ea2f2b17acf9afdc60eb1497d1 649 Pfam PF01464 Transglycosylase SLT domain 481 594 4.4E-26 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 D934_04280 447682ea2f2b17acf9afdc60eb1497d1 649 SUPERFAMILY SSF48435 25 474 3.66E-102 T 15-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 D934_04280 447682ea2f2b17acf9afdc60eb1497d1 649 Pfam PF14718 Soluble lytic murein transglycosylase L domain 402 460 3.5E-9 T 15-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 D934_04280 447682ea2f2b17acf9afdc60eb1497d1 649 Gene3D G3DSA:1.25.20.10 27 380 1.0E-79 T 15-10-2018 D934_02745 71aef2ba67101cbbfa859826a5729b55 447 SUPERFAMILY SSF56935 30 447 3.48E-79 T 15-10-2018 D934_02745 71aef2ba67101cbbfa859826a5729b55 447 Gene3D G3DSA:2.40.160.60 30 447 2.6E-116 T 15-10-2018 D934_02745 71aef2ba67101cbbfa859826a5729b55 447 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 21 447 2.4E-140 T 15-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) D934_10575 767b782cc143b4adf767a74c5249a663 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 434 443 3.5E-23 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D934_10575 767b782cc143b4adf767a74c5249a663 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 283 293 3.5E-23 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D934_10575 767b782cc143b4adf767a74c5249a663 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 495 504 3.5E-23 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D934_10575 767b782cc143b4adf767a74c5249a663 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 508 519 3.5E-23 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D934_10575 767b782cc143b4adf767a74c5249a663 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 562 570 3.5E-23 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D934_10575 767b782cc143b4adf767a74c5249a663 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 470 489 3.5E-23 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D934_10575 767b782cc143b4adf767a74c5249a663 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 401 408 3.5E-23 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D934_10575 767b782cc143b4adf767a74c5249a663 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 539 555 3.5E-23 T 15-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D934_10575 767b782cc143b4adf767a74c5249a663 612 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 612 1.2E-231 T 15-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D934_10575 767b782cc143b4adf767a74c5249a663 612 SUPERFAMILY SSF52218 67 212 1.87E-45 T 15-10-2018 IPR029039 Flavoprotein-like superfamily D934_10575 767b782cc143b4adf767a74c5249a663 612 Gene3D G3DSA:3.40.50.360 59 221 9.6E-50 T 15-10-2018 IPR029039 Flavoprotein-like superfamily D934_10575 767b782cc143b4adf767a74c5249a663 612 PRINTS PR00369 Flavodoxin signature 69 82 4.4E-18 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D934_10575 767b782cc143b4adf767a74c5249a663 612 PRINTS PR00369 Flavodoxin signature 149 159 4.4E-18 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D934_10575 767b782cc143b4adf767a74c5249a663 612 PRINTS PR00369 Flavodoxin signature 173 192 4.4E-18 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D934_10575 767b782cc143b4adf767a74c5249a663 612 PRINTS PR00369 Flavodoxin signature 117 128 4.4E-18 T 15-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D934_10575 767b782cc143b4adf767a74c5249a663 612 SUPERFAMILY SSF52343 459 612 7.73E-48 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D934_10575 767b782cc143b4adf767a74c5249a663 612 Pfam PF00175 Oxidoreductase NAD-binding domain 471 576 4.7E-16 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D934_10575 767b782cc143b4adf767a74c5249a663 612 Pfam PF00667 FAD binding domain 264 439 2.2E-17 T 15-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 D934_10575 767b782cc143b4adf767a74c5249a663 612 SUPERFAMILY SSF63380 236 460 1.94E-49 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D934_10575 767b782cc143b4adf767a74c5249a663 612 Gene3D G3DSA:3.40.50.80 459 612 1.1E-51 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D934_10575 767b782cc143b4adf767a74c5249a663 612 Gene3D G3DSA:2.40.30.10 262 453 2.4E-56 T 15-10-2018 D934_10575 767b782cc143b4adf767a74c5249a663 612 Pfam PF00258 Flavodoxin 70 193 9.8E-33 T 15-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 D934_10575 767b782cc143b4adf767a74c5249a663 612 Gene3D G3DSA:1.20.990.10 293 399 2.4E-56 T 15-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 D934_10280 4c19a2ca9a58dd14a970a20ba633639d 941 Gene3D G3DSA:3.40.50.410 153 332 2.3E-13 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D934_10280 4c19a2ca9a58dd14a970a20ba633639d 941 SMART SM00327 152 338 0.0055 T 15-10-2018 IPR002035 von Willebrand factor, type A D934_10280 4c19a2ca9a58dd14a970a20ba633639d 941 SUPERFAMILY SSF53300 151 306 7.71E-14 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D934_10280 4c19a2ca9a58dd14a970a20ba633639d 941 Pfam PF13550 Putative phage tail protein 400 551 1.6E-10 T 15-10-2018 IPR032876 Tip attachment protein J D934_13620 9bd7bf842557a313a43c685f856cf256 102 Pfam PF13828 Domain of unknown function (DUF4190) 17 80 3.6E-22 T 15-10-2018 IPR025241 Domain of unknown function DUF4190 D934_06050 04e93bdfceee1aabc5666e9934d2f1dc 653 Pfam PF03169 OPT oligopeptide transporter protein 9 611 5.1E-124 T 15-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 D934_06050 04e93bdfceee1aabc5666e9934d2f1dc 653 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 2 608 6.6E-90 T 15-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 D934_06050 04e93bdfceee1aabc5666e9934d2f1dc 653 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 10 612 6.6E-183 T 15-10-2018 IPR004814 Oligopeptide transporter OPT D934_13390 54a96272deff4472bdc8d60c23f539f2 120 SUPERFAMILY SSF46955 19 116 4.03E-17 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily D934_13390 54a96272deff4472bdc8d60c23f539f2 120 Gene3D G3DSA:1.10.1660.10 15 90 1.0E-20 T 15-10-2018 D934_13390 54a96272deff4472bdc8d60c23f539f2 120 Pfam PF13411 MerR HTH family regulatory protein 21 89 1.1E-21 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D934_13390 54a96272deff4472bdc8d60c23f539f2 120 SMART SM00422 21 91 2.3E-6 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D934_04235 33556f333665f3259d7f7e4cb4b0624a 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.4E-11 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_04235 33556f333665f3259d7f7e4cb4b0624a 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 1.4E-11 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_04235 33556f333665f3259d7f7e4cb4b0624a 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.4E-11 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_04235 33556f333665f3259d7f7e4cb4b0624a 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.4E-11 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_04235 33556f333665f3259d7f7e4cb4b0624a 145 SUPERFAMILY SSF46785 10 143 3.47E-28 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_04235 33556f333665f3259d7f7e4cb4b0624a 145 SMART SM00347 28 128 3.9E-17 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_04235 33556f333665f3259d7f7e4cb4b0624a 145 Pfam PF01047 MarR family 38 92 7.0E-12 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_04235 33556f333665f3259d7f7e4cb4b0624a 145 Gene3D G3DSA:1.10.10.10 2 143 2.5E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_13540 542e60144e22c4129b6c206aa0e00174 354 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 17 341 1.1E-138 T 15-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 D934_13540 542e60144e22c4129b6c206aa0e00174 354 Gene3D G3DSA:1.20.120.420 11 153 4.0E-39 T 15-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 D934_13540 542e60144e22c4129b6c206aa0e00174 354 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 42 341 1.3E-110 T 15-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 D934_13540 542e60144e22c4129b6c206aa0e00174 354 Gene3D G3DSA:3.40.50.10470 159 351 1.2E-64 T 15-10-2018 D934_13540 542e60144e22c4129b6c206aa0e00174 354 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 352 38.417 T 15-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 D934_13540 542e60144e22c4129b6c206aa0e00174 354 Pfam PF01008 Initiation factor 2 subunit family 57 341 8.0E-75 T 15-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 D934_13540 542e60144e22c4129b6c206aa0e00174 354 SUPERFAMILY SSF100950 11 345 4.94E-111 T 15-10-2018 IPR037171 NagB/RpiA transferase-like D934_01985 0ad69cd32aa10382473fb7f5cfaab415 86 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 86 20.979 T 15-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_01985 0ad69cd32aa10382473fb7f5cfaab415 86 ProSitePatterns PS00362 Ribosomal protein S15 signature. 36 66 - T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_01985 0ad69cd32aa10382473fb7f5cfaab415 86 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 8 85 1.0E-38 T 15-10-2018 D934_01985 0ad69cd32aa10382473fb7f5cfaab415 86 SMART SM01387 5 85 6.2E-46 T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_01985 0ad69cd32aa10382473fb7f5cfaab415 86 Pfam PF00312 Ribosomal protein S15 6 85 2.7E-35 T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_01985 0ad69cd32aa10382473fb7f5cfaab415 86 Gene3D G3DSA:1.10.287.10 2 86 5.4E-33 T 15-10-2018 D934_01985 0ad69cd32aa10382473fb7f5cfaab415 86 SUPERFAMILY SSF47060 4 86 3.83E-33 T 15-10-2018 IPR009068 S15/NS1, RNA-binding D934_01985 0ad69cd32aa10382473fb7f5cfaab415 86 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 3 86 4.6E-36 T 15-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_10895 a1460ac6ff2f98118e5868afc63b6a73 394 Pfam PF12679 ABC-2 family transporter protein 8 377 2.6E-22 T 15-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 D934_13690 acd16db48cc394d11b542b0af6142390 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 174 7.7E-27 T 15-10-2018 D934_13690 acd16db48cc394d11b542b0af6142390 218 Gene3D G3DSA:3.40.50.150 3 209 5.0E-42 T 15-10-2018 D934_13690 acd16db48cc394d11b542b0af6142390 218 SUPERFAMILY SSF53335 4 185 7.11E-39 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_04720 d2a07f7314f4a26c37b4817a8f8c9fe8 182 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 152 1.2E-5 T 15-10-2018 D934_04720 d2a07f7314f4a26c37b4817a8f8c9fe8 182 PIRSF PIRSF006118 7 181 5.4E-65 T 15-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D934_04720 d2a07f7314f4a26c37b4817a8f8c9fe8 182 SUPERFAMILY SSF56784 17 176 4.47E-33 T 15-10-2018 IPR036412 HAD-like superfamily D934_04720 d2a07f7314f4a26c37b4817a8f8c9fe8 182 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 20 171 4.8E-34 T 15-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D934_04720 d2a07f7314f4a26c37b4817a8f8c9fe8 182 Gene3D G3DSA:3.40.50.1000 1 182 3.8E-47 T 15-10-2018 IPR023214 HAD superfamily D934_13790 c58caff472c4e3d40038a81635c2d680 404 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 246 333 5.0E-12 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal D934_13790 c58caff472c4e3d40038a81635c2d680 404 Pfam PF07282 Putative transposase DNA-binding domain 306 373 9.7E-25 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal D934_13790 c58caff472c4e3d40038a81635c2d680 404 Pfam PF12323 Helix-turn-helix domain 1 48 5.0E-15 T 15-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain D934_13790 c58caff472c4e3d40038a81635c2d680 404 Pfam PF01385 Probable transposase 165 277 2.0E-28 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 D934_01900 da0720f100a73b35d2fa44e5983ece89 384 Gene3D G3DSA:3.20.20.105 1 369 3.7E-152 T 15-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D934_01900 da0720f100a73b35d2fa44e5983ece89 384 SUPERFAMILY SSF51713 3 366 1.26E-147 T 15-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D934_01900 da0720f100a73b35d2fa44e5983ece89 384 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 367 1.6E-143 T 15-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D934_01900 da0720f100a73b35d2fa44e5983ece89 384 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 365 2.1E-83 T 15-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D934_01900 da0720f100a73b35d2fa44e5983ece89 384 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 367 2.1E-149 T 15-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D934_01900 da0720f100a73b35d2fa44e5983ece89 384 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 368 54.87 T 15-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D934_11395 35b41b956e12c2a0f7bc3d00e68f377b 405 Pfam PF01963 TraB family 19 240 7.0E-27 T 15-10-2018 IPR002816 Pheromone shutdown, TraB D934_11395 35b41b956e12c2a0f7bc3d00e68f377b 405 TIGRFAM TIGR00261 traB: TraB family protein 28 401 2.5E-80 T 15-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal D934_01025 46fe77a912dfae9881a1494793706208 159 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 2.2E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_01025 46fe77a912dfae9881a1494793706208 159 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 10 130 1.6E-18 T 15-10-2018 IPR013362 Pilus modification type IV, PilV D934_01025 46fe77a912dfae9881a1494793706208 159 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_06550 78e546b13b0abca08ffe5d02ca83c895 101 Gene3D G3DSA:1.10.260.40 2 81 2.6E-20 T 15-10-2018 D934_06550 78e546b13b0abca08ffe5d02ca83c895 101 SUPERFAMILY SSF47413 4 65 2.11E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_06550 78e546b13b0abca08ffe5d02ca83c895 101 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 12 68 4.7E-24 T 15-10-2018 IPR031856 Putative bacterial antitoxin YdaS D934_13730 e102c87e95a99bf21fe603c01da98121 95 Pfam PF13828 Domain of unknown function (DUF4190) 17 80 1.5E-19 T 15-10-2018 IPR025241 Domain of unknown function DUF4190 D934_10695 85d2adb69ef19ad2f0194dd0b7130489 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 301 320 5.5E-54 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D934_10695 85d2adb69ef19ad2f0194dd0b7130489 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 153 172 5.5E-54 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D934_10695 85d2adb69ef19ad2f0194dd0b7130489 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 271 286 5.5E-54 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D934_10695 85d2adb69ef19ad2f0194dd0b7130489 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 192 211 5.5E-54 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D934_10695 85d2adb69ef19ad2f0194dd0b7130489 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 5.5E-54 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D934_10695 85d2adb69ef19ad2f0194dd0b7130489 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 246 262 5.5E-54 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D934_10695 85d2adb69ef19ad2f0194dd0b7130489 334 SMART SM01004 3 327 3.3E-231 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D934_10695 85d2adb69ef19ad2f0194dd0b7130489 334 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 326 9.9E-135 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D934_10695 85d2adb69ef19ad2f0194dd0b7130489 334 SUPERFAMILY SSF51569 2 329 1.16E-138 T 15-10-2018 D934_10695 85d2adb69ef19ad2f0194dd0b7130489 334 PIRSF PIRSF001415 1 330 1.5E-150 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D934_10695 85d2adb69ef19ad2f0194dd0b7130489 334 Gene3D G3DSA:3.20.20.70 1 331 7.4E-140 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D934_10465 c1a8eff02bdb29b68fa1160a883230b3 168 SUPERFAMILY SSF54523 24 127 3.06E-7 T 15-10-2018 D934_10465 c1a8eff02bdb29b68fa1160a883230b3 168 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 42 8.9E-4 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_10465 c1a8eff02bdb29b68fa1160a883230b3 168 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 21 41 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_05435 0566abc5807eab47661e9bf1ab4ce3b1 200 Gene3D G3DSA:2.40.30.20 102 200 5.7E-33 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D934_05435 0566abc5807eab47661e9bf1ab4ce3b1 200 PIRSF PIRSF000498 1 200 3.3E-73 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D934_05435 0566abc5807eab47661e9bf1ab4ce3b1 200 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 5.9E-57 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D934_05435 0566abc5807eab47661e9bf1ab4ce3b1 200 SUPERFAMILY SSF63380 1 88 2.04E-22 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D934_05435 0566abc5807eab47661e9bf1ab4ce3b1 200 Pfam PF00677 Lumazine binding domain 3 87 1.1E-18 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D934_05435 0566abc5807eab47661e9bf1ab4ce3b1 200 Pfam PF00677 Lumazine binding domain 100 184 2.0E-23 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D934_05435 0566abc5807eab47661e9bf1ab4ce3b1 200 Gene3D G3DSA:2.40.30.20 1 89 2.3E-24 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D934_05435 0566abc5807eab47661e9bf1ab4ce3b1 200 SUPERFAMILY SSF63380 93 194 2.89E-31 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D934_05850 edeeb6ec0cadf3fabce3d4dd91fe362c 365 SUPERFAMILY SSF53383 27 360 8.16E-70 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D934_05850 edeeb6ec0cadf3fabce3d4dd91fe362c 365 Gene3D G3DSA:3.90.1150.10 11 353 1.1E-117 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D934_05850 edeeb6ec0cadf3fabce3d4dd91fe362c 365 Gene3D G3DSA:3.40.640.10 55 264 1.1E-117 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D934_05850 edeeb6ec0cadf3fabce3d4dd91fe362c 365 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 13 360 5.0E-112 T 15-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 D934_05850 edeeb6ec0cadf3fabce3d4dd91fe362c 365 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 361 53.926 T 15-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 D934_05850 edeeb6ec0cadf3fabce3d4dd91fe362c 365 Pfam PF00155 Aminotransferase class I and II 48 356 5.4E-51 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D934_10530 a532581b44f09a401d4841764b473061 828 Pfam PF07793 Protein of unknown function (DUF1631) 18 813 1.1E-206 T 15-10-2018 IPR012434 Protein of unknown function DUF1631 D934_10030 37b2e9f4953ff1dde855ab8adb1637df 228 PIRSF PIRSF028451 1 228 3.0E-96 T 15-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 D934_10030 37b2e9f4953ff1dde855ab8adb1637df 228 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 5 225 4.3E-72 T 15-10-2018 IPR012808 Conserved hypothetical protein CHP02453 D934_10030 37b2e9f4953ff1dde855ab8adb1637df 228 Pfam PF09365 Conserved hypothetical protein (DUF2461) 8 219 4.0E-55 T 15-10-2018 IPR012808 Conserved hypothetical protein CHP02453 D934_13815 a26b49fc9282f1d5a3d31c5c78508f35 150 Pfam PF01850 PIN domain 2 122 1.1E-10 T 15-10-2018 IPR002716 PIN domain D934_13815 a26b49fc9282f1d5a3d31c5c78508f35 150 SUPERFAMILY SSF88723 1 137 2.61E-24 T 15-10-2018 IPR029060 PIN-like domain superfamily D934_13815 a26b49fc9282f1d5a3d31c5c78508f35 150 Gene3D G3DSA:3.40.50.1010 1 139 2.9E-35 T 15-10-2018 D934_07915 97f8f4669e040fd92da3bfa556eef65f 357 Gene3D G3DSA:1.10.443.10 178 357 1.6E-23 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D934_07915 97f8f4669e040fd92da3bfa556eef65f 357 Pfam PF00589 Phage integrase family 181 350 2.1E-18 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D934_07915 97f8f4669e040fd92da3bfa556eef65f 357 SUPERFAMILY SSF56349 67 354 1.24E-41 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D934_00135 bb17b157193953ae75afee0bced82f7c 623 Gene3D G3DSA:3.40.50.300 3 274 4.8E-64 T 15-10-2018 D934_00135 bb17b157193953ae75afee0bced82f7c 623 Gene3D G3DSA:3.40.50.300 277 541 5.4E-65 T 15-10-2018 D934_00135 bb17b157193953ae75afee0bced82f7c 623 Gene3D G3DSA:1.10.287.380 546 623 8.4E-23 T 15-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 D934_00135 bb17b157193953ae75afee0bced82f7c 623 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_00135 bb17b157193953ae75afee0bced82f7c 623 SUPERFAMILY SSF52540 2 240 4.91E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00135 bb17b157193953ae75afee0bced82f7c 623 Pfam PF12848 ABC transporter 219 293 2.1E-10 T 15-10-2018 IPR032781 ABC-transporter extension domain D934_00135 bb17b157193953ae75afee0bced82f7c 623 Pfam PF00005 ABC transporter 20 180 3.0E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_00135 bb17b157193953ae75afee0bced82f7c 623 SMART SM00382 28 225 2.5E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_00135 bb17b157193953ae75afee0bced82f7c 623 SMART SM00382 339 509 9.1E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_00135 bb17b157193953ae75afee0bced82f7c 623 Pfam PF16326 ABC transporter C-terminal domain 554 621 3.1E-20 T 15-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 D934_00135 bb17b157193953ae75afee0bced82f7c 623 SUPERFAMILY SSF52540 308 508 2.44E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_00135 bb17b157193953ae75afee0bced82f7c 623 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_00135 bb17b157193953ae75afee0bced82f7c 623 Pfam PF00005 ABC transporter 332 464 3.9E-20 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_05935 a29580df6edd1477066388ab9815ef5c 160 Gene3D G3DSA:2.60.40.790 12 147 1.3E-37 T 15-10-2018 IPR008978 HSP20-like chaperone D934_05935 a29580df6edd1477066388ab9815ef5c 160 Pfam PF00011 Hsp20/alpha crystallin family 48 147 3.1E-24 T 15-10-2018 IPR002068 Alpha crystallin/Hsp20 domain D934_05935 a29580df6edd1477066388ab9815ef5c 160 SUPERFAMILY SSF49764 23 147 1.85E-37 T 15-10-2018 IPR008978 HSP20-like chaperone D934_04230 a6ecd0a7f3d5b5970c5bc970ce769466 749 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 474 6.4E-129 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D934_04230 a6ecd0a7f3d5b5970c5bc970ce769466 749 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 13 745 0.0 T 15-10-2018 D934_04230 a6ecd0a7f3d5b5970c5bc970ce769466 749 SUPERFAMILY SSF56719 35 489 2.22E-146 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D934_04230 a6ecd0a7f3d5b5970c5bc970ce769466 749 SUPERFAMILY SSF101904 503 745 1.12E-47 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal D934_04230 a6ecd0a7f3d5b5970c5bc970ce769466 749 SMART SM00434 15 467 2.5E-205 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D934_04230 a6ecd0a7f3d5b5970c5bc970ce769466 749 Gene3D G3DSA:3.30.1360.40 242 337 7.0E-167 T 15-10-2018 D934_04230 a6ecd0a7f3d5b5970c5bc970ce769466 749 Gene3D G3DSA:1.10.268.10 375 460 7.0E-167 T 15-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D934_04230 a6ecd0a7f3d5b5970c5bc970ce769466 749 Gene3D G3DSA:3.90.199.10 36 487 7.0E-167 T 15-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 D934_04230 a6ecd0a7f3d5b5970c5bc970ce769466 749 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 33.038 T 15-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D934_04230 a6ecd0a7f3d5b5970c5bc970ce769466 749 Gene3D G3DSA:2.120.10.90 505 736 3.4E-16 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal D934_04230 a6ecd0a7f3d5b5970c5bc970ce769466 749 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 651 700 1.1E-4 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D934_04230 a6ecd0a7f3d5b5970c5bc970ce769466 749 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 603 645 0.0065 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D934_02365 e4b96a0a4ea910fa83248b1751e64cf2 485 Pfam PF00361 Proton-conducting membrane transporter 129 422 7.1E-80 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02365 e4b96a0a4ea910fa83248b1751e64cf2 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 1.2E-8 T 15-10-2018 D934_02365 e4b96a0a4ea910fa83248b1751e64cf2 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 1.2E-8 T 15-10-2018 D934_02365 e4b96a0a4ea910fa83248b1751e64cf2 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 416 435 1.2E-8 T 15-10-2018 D934_02365 e4b96a0a4ea910fa83248b1751e64cf2 485 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 1.2E-8 T 15-10-2018 D934_02365 e4b96a0a4ea910fa83248b1751e64cf2 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 14 473 6.4E-142 T 15-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 D934_02365 e4b96a0a4ea910fa83248b1751e64cf2 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 11 474 18.167 T 15-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 D934_09840 095482edcf4fe5ff04976788a92434ec 710 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 1 689 1.0E-184 T 15-10-2018 IPR010019 Integral membrane protein, YccS D934_09840 095482edcf4fe5ff04976788a92434ec 710 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 1 689 1.7E-195 T 15-10-2018 IPR010020 Integral membrane protein, YccS/YhfK D934_09840 095482edcf4fe5ff04976788a92434ec 710 Pfam PF13515 Fusaric acid resistance protein-like 386 506 6.1E-18 T 15-10-2018 D934_09840 095482edcf4fe5ff04976788a92434ec 710 SUPERFAMILY SSF103473 21 495 3.14E-6 T 15-10-2018 IPR036259 MFS transporter superfamily D934_09840 095482edcf4fe5ff04976788a92434ec 710 Pfam PF12805 FUSC-like inner membrane protein yccS 47 329 1.1E-94 T 15-10-2018 IPR032692 Integral membrane protein YccS, N-terminal D934_05120 d278e1b239b7302d4bd18542a2fdd002 93 Pfam PF13744 Helix-turn-helix domain 12 93 1.6E-17 T 15-10-2018 IPR039554 HigA2-like, helix-turn-helix domain D934_05120 d278e1b239b7302d4bd18542a2fdd002 93 SUPERFAMILY SSF47413 22 93 4.29E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_05120 d278e1b239b7302d4bd18542a2fdd002 93 Gene3D G3DSA:1.10.260.40 9 93 5.3E-19 T 15-10-2018 D934_00960 6796ef01b36a49b80262322cf8743536 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 121 236 3.0E-36 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel D934_00575 3d297ef91dfb810c6dc065b59b807b34 171 SUPERFAMILY SSF116734 3 141 5.89E-33 T 15-10-2018 D934_00575 3d297ef91dfb810c6dc065b59b807b34 171 Gene3D G3DSA:1.10.287.1120 83 134 1.0E-31 T 15-10-2018 D934_00575 3d297ef91dfb810c6dc065b59b807b34 171 Pfam PF01420 Type I restriction modification DNA specificity domain 3 98 4.8E-15 T 15-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 D934_00575 3d297ef91dfb810c6dc065b59b807b34 171 Gene3D G3DSA:3.90.220.20 3 82 1.0E-31 T 15-10-2018 D934_13350 480cd0b90a406ac0f29e993d1d86c92a 444 Pfam PF13742 OB-fold nucleic acid binding domain 11 100 1.3E-25 T 15-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 D934_13350 480cd0b90a406ac0f29e993d1d86c92a 444 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 5 440 31.101 T 15-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 D934_13350 480cd0b90a406ac0f29e993d1d86c92a 444 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 355 1.2E-125 T 15-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 D934_13350 480cd0b90a406ac0f29e993d1d86c92a 444 Pfam PF02601 Exonuclease VII, large subunit 124 437 3.8E-94 T 15-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 D934_03660 cdbae3a901fb1f25bbc3f21a83086df4 310 Gene3D G3DSA:3.40.50.300 2 238 8.0E-61 T 15-10-2018 D934_03660 cdbae3a901fb1f25bbc3f21a83086df4 310 SMART SM00382 36 218 1.2E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain D934_03660 cdbae3a901fb1f25bbc3f21a83086df4 310 SUPERFAMILY SSF52540 6 238 4.51E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_03660 cdbae3a901fb1f25bbc3f21a83086df4 310 Pfam PF00005 ABC transporter 27 171 1.0E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D934_03660 cdbae3a901fb1f25bbc3f21a83086df4 310 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D934_04730 d26adcaa1e39cc1617d5135bd364d9e8 75 Gene3D G3DSA:3.30.300.90 1 75 1.8E-29 T 15-10-2018 D934_04730 d26adcaa1e39cc1617d5135bd364d9e8 75 PIRSF PIRSF003113 2 75 3.0E-19 T 15-10-2018 IPR002634 BolA protein D934_04730 d26adcaa1e39cc1617d5135bd364d9e8 75 SUPERFAMILY SSF82657 3 74 3.27E-21 T 15-10-2018 IPR036065 BolA-like superfamily D934_04730 d26adcaa1e39cc1617d5135bd364d9e8 75 Pfam PF01722 BolA-like protein 18 74 3.4E-16 T 15-10-2018 IPR002634 BolA protein D934_08720 22f678c6808fc628ed0011891ea41234 375 SUPERFAMILY SSF103647 227 266 8.76E-6 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 D934_08720 22f678c6808fc628ed0011891ea41234 375 PRINTS PR01021 OMPA domain signature 272 294 6.3E-16 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D934_08720 22f678c6808fc628ed0011891ea41234 375 PRINTS PR01021 OMPA domain signature 302 317 6.3E-16 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D934_08720 22f678c6808fc628ed0011891ea41234 375 PRINTS PR01021 OMPA domain signature 317 333 6.3E-16 T 15-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D934_08720 22f678c6808fc628ed0011891ea41234 375 Gene3D G3DSA:3.30.1330.60 261 375 1.2E-39 T 15-10-2018 IPR036737 OmpA-like domain superfamily D934_08720 22f678c6808fc628ed0011891ea41234 375 Pfam PF00691 OmpA family 271 367 4.6E-23 T 15-10-2018 IPR006665 OmpA-like domain D934_08720 22f678c6808fc628ed0011891ea41234 375 Gene3D G3DSA:2.40.160.20 19 199 1.1E-22 T 15-10-2018 D934_08720 22f678c6808fc628ed0011891ea41234 375 SUPERFAMILY SSF56925 27 170 1.28E-17 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D934_08720 22f678c6808fc628ed0011891ea41234 375 Pfam PF13505 Outer membrane protein beta-barrel domain 8 178 6.3E-16 T 15-10-2018 IPR027385 Outer membrane protein beta-barrel D934_08720 22f678c6808fc628ed0011891ea41234 375 SUPERFAMILY SSF103088 266 372 1.06E-35 T 15-10-2018 IPR036737 OmpA-like domain superfamily D934_08665 d5ad87dcc353f0cfae7fd1a0919ebb9d 146 Pfam PF01381 Helix-turn-helix 57 93 3.1E-6 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_08665 d5ad87dcc353f0cfae7fd1a0919ebb9d 146 Gene3D G3DSA:1.10.260.40 30 107 1.1E-14 T 15-10-2018 D934_08665 d5ad87dcc353f0cfae7fd1a0919ebb9d 146 SMART SM00530 56 109 0.0014 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_08665 d5ad87dcc353f0cfae7fd1a0919ebb9d 146 SUPERFAMILY SSF47413 54 93 4.9E-9 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_03190 e721f82a57936fac8a13f0165425f447 242 Gene3D G3DSA:3.30.70.2970 51 158 5.8E-59 T 15-10-2018 D934_03190 e721f82a57936fac8a13f0165425f447 242 Gene3D G3DSA:3.30.110.170 41 239 5.8E-59 T 15-10-2018 D934_03190 e721f82a57936fac8a13f0165425f447 242 Pfam PF04402 Protein of unknown function (DUF541) 40 238 2.6E-43 T 15-10-2018 IPR007497 Protein of unknown function DUF541 D934_07665 edfc03eed7c8ef42ae0d80f2f81729b3 107 SUPERFAMILY SSF51161 12 55 5.13E-6 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily D934_08885 edfc03eed7c8ef42ae0d80f2f81729b3 107 SUPERFAMILY SSF51161 12 55 5.13E-6 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily D934_12255 edfc03eed7c8ef42ae0d80f2f81729b3 107 SUPERFAMILY SSF51161 12 55 5.13E-6 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily D934_00795 70555fcf2f182109e408616f13cc7738 129 Gene3D G3DSA:1.10.3510.10 2 128 2.5E-16 T 15-10-2018 IPR023138 NMB0513-like superfamily D934_00795 70555fcf2f182109e408616f13cc7738 129 SUPERFAMILY SSF160472 10 122 7.59E-36 T 15-10-2018 IPR023138 NMB0513-like superfamily D934_00795 70555fcf2f182109e408616f13cc7738 129 Pfam PF04591 Protein of unknown function, DUF596 58 129 4.2E-23 T 15-10-2018 IPR007670 Protein of unknown function DUF596 D934_06160 7942939ad62efc911cc90b78e91db1b0 123 Pfam PF13986 Domain of unknown function (DUF4224) 25 68 5.8E-20 T 15-10-2018 IPR025319 Domain of unknown function DUF4224 D934_10950 584de0729b14222d96c6dc9a2f045107 172 Gene3D G3DSA:3.90.20.20 2 111 1.5E-22 T 15-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 D934_10950 584de0729b14222d96c6dc9a2f045107 172 PRINTS PR00773 GrpE protein signature 149 168 2.6E-23 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D934_10950 584de0729b14222d96c6dc9a2f045107 172 PRINTS PR00773 GrpE protein signature 42 58 2.6E-23 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D934_10950 584de0729b14222d96c6dc9a2f045107 172 PRINTS PR00773 GrpE protein signature 70 85 2.6E-23 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D934_10950 584de0729b14222d96c6dc9a2f045107 172 PRINTS PR00773 GrpE protein signature 122 137 2.6E-23 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D934_10950 584de0729b14222d96c6dc9a2f045107 172 Hamap MF_01151 Protein GrpE [grpE]. 3 170 19.13 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D934_10950 584de0729b14222d96c6dc9a2f045107 172 Pfam PF01025 GrpE 11 170 3.1E-45 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D934_10950 584de0729b14222d96c6dc9a2f045107 172 SUPERFAMILY SSF51064 117 171 1.44E-18 T 15-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 D934_10950 584de0729b14222d96c6dc9a2f045107 172 Gene3D G3DSA:2.30.22.10 114 170 4.2E-23 T 15-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 D934_10950 584de0729b14222d96c6dc9a2f045107 172 ProSitePatterns PS01071 grpE protein signature. 125 168 - T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D934_10950 584de0729b14222d96c6dc9a2f045107 172 SUPERFAMILY SSF58014 20 110 4.32E-21 T 15-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 D934_09730 d749467475c9f815f34623e9c1a68070 176 SMART SM00260 29 166 6.5E-5 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D934_09730 d749467475c9f815f34623e9c1a68070 176 Pfam PF01584 CheW-like domain 35 166 6.0E-24 T 15-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D934_09730 d749467475c9f815f34623e9c1a68070 176 Gene3D G3DSA:2.30.30.40 45 155 1.9E-15 T 15-10-2018 D934_09730 d749467475c9f815f34623e9c1a68070 176 Gene3D G3DSA:2.40.50.180 52 118 1.9E-15 T 15-10-2018 D934_09730 d749467475c9f815f34623e9c1a68070 176 SUPERFAMILY SSF50341 26 170 1.1E-26 T 15-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 D934_09300 ab270a8b27d75dee065717b330884e8d 354 Gene3D G3DSA:3.40.50.300 1 188 1.3E-45 T 15-10-2018 D934_09300 ab270a8b27d75dee065717b330884e8d 354 Pfam PF05707 Zonular occludens toxin (Zot) 1 187 2.3E-53 T 15-10-2018 IPR008900 Zona occludens toxin D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 SUPERFAMILY SSF50800 87 184 1.27E-23 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 19 489 6.6E-154 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 PRINTS PR01050 Pyruvate kinase family signature 76 92 8.0E-56 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 PRINTS PR01050 Pyruvate kinase family signature 310 328 8.0E-56 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 PRINTS PR01050 Pyruvate kinase family signature 203 217 8.0E-56 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 PRINTS PR01050 Pyruvate kinase family signature 233 259 8.0E-56 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 PRINTS PR01050 Pyruvate kinase family signature 260 284 8.0E-56 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 PRINTS PR01050 Pyruvate kinase family signature 285 309 8.0E-56 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 PRINTS PR01050 Pyruvate kinase family signature 329 345 8.0E-56 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 Pfam PF00224 Pyruvate kinase, barrel domain 19 355 1.7E-117 T 15-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 ProSitePatterns PS00110 Pyruvate kinase active site signature. 231 243 - T 15-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 SUPERFAMILY SSF51621 17 355 2.09E-88 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 Gene3D G3DSA:3.20.20.60 19 351 1.0E-154 T 15-10-2018 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 SUPERFAMILY SSF52935 339 489 8.9E-37 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 Gene3D G3DSA:3.40.1380.20 352 485 1.0E-154 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 Pfam PF02887 Pyruvate kinase, alpha/beta domain 373 486 4.3E-25 T 15-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D934_13075 5cb3d8ecf1ef5eea547a2e972ccaa787 501 Gene3D G3DSA:2.40.33.10 87 185 1.0E-154 T 15-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D934_05505 17b5f324991f9fa2d742d4e70b364e2b 82 SMART SM00899 1 76 4.6E-15 T 15-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 D934_05505 17b5f324991f9fa2d742d4e70b364e2b 82 SUPERFAMILY SSF50037 4 76 4.12E-13 T 15-10-2018 IPR008988 Transcriptional repressor, C-terminal D934_05505 17b5f324991f9fa2d742d4e70b364e2b 82 Gene3D G3DSA:2.30.30.90 1 80 8.5E-23 T 15-10-2018 IPR038157 Ferrous iron transporter, core domain D934_05505 17b5f324991f9fa2d742d4e70b364e2b 82 Pfam PF04023 FeoA domain 4 75 3.2E-16 T 15-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 D934_09695 9e201e691f56029f555d758589d77c5b 328 SUPERFAMILY SSF110997 250 322 1.57E-13 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D934_09695 9e201e691f56029f555d758589d77c5b 328 SUPERFAMILY SSF110997 103 164 6.41E-7 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D934_09695 9e201e691f56029f555d758589d77c5b 328 Gene3D G3DSA:3.30.70.1070 253 324 4.2E-10 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D934_09695 9e201e691f56029f555d758589d77c5b 328 Pfam PF05036 Sporulation related domain 101 165 5.3E-11 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 D934_09695 9e201e691f56029f555d758589d77c5b 328 Pfam PF05036 Sporulation related domain 253 317 7.7E-14 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 D934_09220 1ff52882e91b9215b78bee89a4528f1a 152 Pfam PF12472 Phage related protein 89 149 1.5E-15 T 15-10-2018 IPR021096 Vibrio phage VSK, Orf152 D934_09220 1ff52882e91b9215b78bee89a4528f1a 152 Gene3D G3DSA:1.10.260.40 34 107 2.0E-5 T 15-10-2018 D934_03150 6b4d83e40a334dea2905737f6c1ab0d9 290 Pfam PF00378 Enoyl-CoA hydratase/isomerase 45 213 2.5E-19 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 D934_03150 6b4d83e40a334dea2905737f6c1ab0d9 290 SUPERFAMILY SSF52096 72 257 6.59E-33 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D934_03150 6b4d83e40a334dea2905737f6c1ab0d9 290 Gene3D G3DSA:3.90.226.10 11 229 4.2E-75 T 15-10-2018 D934_06570 9a890f883a7d7bd2bbb600e64fcc0a41 196 Pfam PF02498 BRO family, N-terminal domain 15 99 1.8E-23 T 15-10-2018 IPR003497 BRO N-terminal domain D934_06570 9a890f883a7d7bd2bbb600e64fcc0a41 196 SMART SM01040 14 99 6.2E-39 T 15-10-2018 IPR003497 BRO N-terminal domain D934_08455 0de49526fbc876afb248cd6a334a7814 196 SMART SM01040 14 99 1.1E-36 T 15-10-2018 IPR003497 BRO N-terminal domain D934_08455 0de49526fbc876afb248cd6a334a7814 196 Pfam PF02498 BRO family, N-terminal domain 15 99 1.1E-22 T 15-10-2018 IPR003497 BRO N-terminal domain D934_09780 ea4eb6e0ccd84e8b1675840c43d88a5b 127 Pfam PF03692 Putative zinc- or iron-chelating domain 4 97 9.5E-14 T 15-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein D934_04650 beb7b4bfe8b6e9821abfea2fc3a68e2c 175 ProSitePatterns PS00934 Glyoxalase I signature 1. 27 48 - T 15-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 D934_04650 beb7b4bfe8b6e9821abfea2fc3a68e2c 175 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 18 172 6.7E-45 T 15-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 D934_04650 beb7b4bfe8b6e9821abfea2fc3a68e2c 175 Gene3D G3DSA:3.10.180.10 4 172 2.6E-57 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D934_04650 beb7b4bfe8b6e9821abfea2fc3a68e2c 175 SUPERFAMILY SSF54593 12 173 7.52E-33 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D934_04650 beb7b4bfe8b6e9821abfea2fc3a68e2c 175 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 25 168 3.2E-21 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D934_04650 beb7b4bfe8b6e9821abfea2fc3a68e2c 175 ProSitePatterns PS00935 Glyoxalase I signature 2. 112 128 - T 15-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 D934_12685 550e9c517b81d2c5ecc98d552041f3e7 132 Gene3D G3DSA:1.10.3510.10 6 131 1.0E-14 T 15-10-2018 IPR023138 NMB0513-like superfamily D934_12685 550e9c517b81d2c5ecc98d552041f3e7 132 SUPERFAMILY SSF160472 3 124 6.93E-40 T 15-10-2018 IPR023138 NMB0513-like superfamily D934_12685 550e9c517b81d2c5ecc98d552041f3e7 132 Pfam PF04591 Protein of unknown function, DUF596 61 130 2.3E-25 T 15-10-2018 IPR007670 Protein of unknown function DUF596 D934_04000 c7448f585348601f41b30e8d6c0fd20f 420 Pfam PF06738 Putative threonine/serine exporter 21 263 2.3E-53 T 15-10-2018 IPR010619 Putative threonine/serine exporter D934_04000 c7448f585348601f41b30e8d6c0fd20f 420 Pfam PF12821 Threonine/Serine exporter, ThrE 290 411 7.3E-15 T 15-10-2018 IPR024528 Threonine/Serine exporter, ThrE D934_07325 61ab10c6461704f54a0fb73f216a4791 57 SUPERFAMILY SSF53335 13 54 1.44E-9 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_07325 61ab10c6461704f54a0fb73f216a4791 57 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 17 33 7.8E-5 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D934_07325 61ab10c6461704f54a0fb73f216a4791 57 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 39 53 7.8E-5 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D934_07325 61ab10c6461704f54a0fb73f216a4791 57 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 17 53 2.4E-6 T 15-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D934_07325 61ab10c6461704f54a0fb73f216a4791 57 Gene3D G3DSA:3.40.50.150 4 57 5.3E-7 T 15-10-2018 D934_05160 be883c58982e512e53160787de60ca9e 529 Pfam PF05136 Phage portal protein, lambda family 53 397 1.7E-95 T 15-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 D934_05160 be883c58982e512e53160787de60ca9e 529 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 45 504 5.7E-204 T 15-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 D934_10215 5932af009e34bc541dc214fd10e68c9e 301 SUPERFAMILY SSF51197 92 230 4.12E-20 T 15-10-2018 D934_10215 5932af009e34bc541dc214fd10e68c9e 301 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 72 224 1.1E-46 T 15-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 D934_10215 5932af009e34bc541dc214fd10e68c9e 301 Gene3D G3DSA:2.60.120.330 44 233 2.0E-42 T 15-10-2018 IPR027443 Isopenicillin N synthase-like D934_02250 2e88c606a9559012ed591e9cf8ddeeea 167 Gene3D G3DSA:3.40.50.150 1 113 4.5E-22 T 15-10-2018 D934_02250 2e88c606a9559012ed591e9cf8ddeeea 167 Pfam PF02384 N-6 DNA Methylase 10 126 5.1E-22 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 D934_02250 2e88c606a9559012ed591e9cf8ddeeea 167 SUPERFAMILY SSF53335 10 162 4.57E-27 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_08485 d8dd023bc5582f92d5a4dafbfcc6e496 88 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 81 1.1E-21 T 15-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system D934_08485 d8dd023bc5582f92d5a4dafbfcc6e496 88 Gene3D G3DSA:3.10.450.530 1 83 6.2E-15 T 15-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily D934_01535 b674fb1c1805a2b4691f4ebd529dbb86 381 Pfam PF01757 Acyltransferase family 4 254 3.8E-18 T 15-10-2018 IPR002656 Acyltransferase 3 GO:0016747 D934_02940 00bf47f19526bf00b59676532e4d2978 297 PIRSF PIRSF020481 5 297 2.1E-118 T 15-10-2018 IPR014507 Baseplate assembly protein J, predicted D934_02940 00bf47f19526bf00b59676532e4d2978 297 Pfam PF04865 Baseplate J-like protein 113 254 1.7E-24 T 15-10-2018 IPR006949 Baseplate protein J-like D934_05105 00bf47f19526bf00b59676532e4d2978 297 PIRSF PIRSF020481 5 297 2.1E-118 T 15-10-2018 IPR014507 Baseplate assembly protein J, predicted D934_05105 00bf47f19526bf00b59676532e4d2978 297 Pfam PF04865 Baseplate J-like protein 113 254 1.7E-24 T 15-10-2018 IPR006949 Baseplate protein J-like D934_09240 62e92d85ba2355b82624a2bc5ad4ffd4 103 Pfam PF02303 Helix-destabilising protein 4 79 1.7E-10 T 15-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 D934_09240 62e92d85ba2355b82624a2bc5ad4ffd4 103 Gene3D G3DSA:2.40.50.140 1 83 2.1E-12 T 15-10-2018 D934_09240 62e92d85ba2355b82624a2bc5ad4ffd4 103 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 13 71 4.0E-30 T 15-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 D934_09240 62e92d85ba2355b82624a2bc5ad4ffd4 103 SUPERFAMILY SSF50249 1 82 3.08E-21 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_06290 47f10f88d7294cc575d4675c5f6a94b1 266 SMART SM01040 14 107 7.2E-22 T 15-10-2018 IPR003497 BRO N-terminal domain D934_06290 47f10f88d7294cc575d4675c5f6a94b1 266 Pfam PF02498 BRO family, N-terminal domain 17 108 1.1E-8 T 15-10-2018 IPR003497 BRO N-terminal domain D934_08450 cbfb858328063335971735a4291d7bd5 203 Pfam PF02498 BRO family, N-terminal domain 15 102 7.3E-23 T 15-10-2018 IPR003497 BRO N-terminal domain D934_08450 cbfb858328063335971735a4291d7bd5 203 SMART SM01040 14 102 1.2E-22 T 15-10-2018 IPR003497 BRO N-terminal domain D934_11580 95dd6787ca4664e83c0f9556d3e2b372 330 Gene3D G3DSA:3.40.50.300 15 182 1.2E-42 T 15-10-2018 D934_11580 95dd6787ca4664e83c0f9556d3e2b372 330 SUPERFAMILY SSF52540 18 219 3.55E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_11580 95dd6787ca4664e83c0f9556d3e2b372 330 Pfam PF13177 DNA polymerase III, delta subunit 20 181 1.2E-33 T 15-10-2018 D934_00220 513e249485347c1e730acf64c371cd2c 135 Hamap MF_00422 Protein translocase subunit SecE [secE]. 76 131 11.668 T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D934_00220 513e249485347c1e730acf64c371cd2c 135 PRINTS PR01650 Bacterial translocase SecE signature 54 75 3.1E-13 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 D934_00220 513e249485347c1e730acf64c371cd2c 135 PRINTS PR01650 Bacterial translocase SecE signature 75 95 3.1E-13 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 D934_00220 513e249485347c1e730acf64c371cd2c 135 PRINTS PR01650 Bacterial translocase SecE signature 99 119 3.1E-13 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 D934_00220 513e249485347c1e730acf64c371cd2c 135 Gene3D G3DSA:1.20.5.1030 76 132 1.9E-15 T 15-10-2018 IPR038379 SecE superfamily D934_00220 513e249485347c1e730acf64c371cd2c 135 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 79 133 4.3E-19 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 D934_00220 513e249485347c1e730acf64c371cd2c 135 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 81 132 1.6E-16 T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D934_00220 513e249485347c1e730acf64c371cd2c 135 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 81 109 - T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D934_07430 eac98691ed9e95f96692c83b0d3bde00 81 SUPERFAMILY SSF55021 1 75 1.49E-5 T 15-10-2018 D934_07430 eac98691ed9e95f96692c83b0d3bde00 81 Pfam PF13710 ACT domain 12 73 2.9E-20 T 15-10-2018 D934_02275 648fd9fbb85e49bfd869e325bf7f0e85 132 SUPERFAMILY SSF111369 3 120 5.75E-7 T 15-10-2018 D934_02275 648fd9fbb85e49bfd869e325bf7f0e85 132 PIRSF PIRSF028609 30 132 2.0E-66 T 15-10-2018 IPR016894 Uncharacterised conserved protein UCP028609 D934_02275 648fd9fbb85e49bfd869e325bf7f0e85 132 Gene3D G3DSA:2.40.50.100 50 104 4.3E-13 T 15-10-2018 D934_02275 648fd9fbb85e49bfd869e325bf7f0e85 132 Gene3D G3DSA:1.10.287.470 3 49 4.3E-13 T 15-10-2018 D934_02275 648fd9fbb85e49bfd869e325bf7f0e85 132 Gene3D G3DSA:2.40.30.170 105 128 4.3E-13 T 15-10-2018 D934_08850 c0b9406e98cc3bb6c5c0294fb7dfa10d 60 TIGRFAM TIGR04560 ribo_THX: ribosomal small subunit protein bTHX 1 24 1.8E-13 T 15-10-2018 IPR030826 30S ribosomal protein GO:0005840 D934_08850 c0b9406e98cc3bb6c5c0294fb7dfa10d 60 Pfam PF17067 Ribosomal protein S31e 2 37 1.9E-9 T 15-10-2018 IPR030826 30S ribosomal protein GO:0005840 D934_10840 5234239fa8dbcaa95f66d47f13218966 98 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 94 9.3E-17 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family D934_10840 5234239fa8dbcaa95f66d47f13218966 98 Gene3D G3DSA:3.30.2310.20 2 94 3.2E-11 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D934_04270 60990cad71482ef51a573e5810bcf0e7 279 Gene3D G3DSA:3.60.15.10 3 276 3.4E-51 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D934_04270 60990cad71482ef51a573e5810bcf0e7 279 Pfam PF00753 Metallo-beta-lactamase superfamily 43 264 2.0E-41 T 15-10-2018 IPR001279 Metallo-beta-lactamase D934_04270 60990cad71482ef51a573e5810bcf0e7 279 SMART SM00849 45 264 2.6E-20 T 15-10-2018 IPR001279 Metallo-beta-lactamase D934_04270 60990cad71482ef51a573e5810bcf0e7 279 SUPERFAMILY SSF56281 27 269 3.54E-33 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D934_12665 31420bcb8058bb19b471cd475b65b039 220 SUPERFAMILY SSF144091 19 204 3.66E-35 T 15-10-2018 D934_12665 31420bcb8058bb19b471cd475b65b039 220 Pfam PF01694 Rhomboid family 54 202 2.9E-28 T 15-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 D934_12665 31420bcb8058bb19b471cd475b65b039 220 Gene3D G3DSA:1.20.1540.10 14 209 5.1E-27 T 15-10-2018 IPR035952 Rhomboid-like superfamily D934_07135 0608eff2622c08b444115296974c9163 135 Gene3D G3DSA:1.10.3230.20 1 129 4.7E-13 T 15-10-2018 IPR038258 Peptidoglycan hydrolase Gp4 superfamily D934_07135 0608eff2622c08b444115296974c9163 135 Pfam PF11650 P22 tail accessory factor 21 113 3.2E-6 T 15-10-2018 IPR020362 Tail accessory factor GP4 D934_04540 0608eff2622c08b444115296974c9163 135 Gene3D G3DSA:1.10.3230.20 1 129 4.7E-13 T 15-10-2018 IPR038258 Peptidoglycan hydrolase Gp4 superfamily D934_04540 0608eff2622c08b444115296974c9163 135 Pfam PF11650 P22 tail accessory factor 21 113 3.2E-6 T 15-10-2018 IPR020362 Tail accessory factor GP4 D934_06460 eaeb4ca90b1cc3c4c1ac683d1213aa5f 158 Pfam PF07505 Protein of unknown function (DUF5131) 16 126 1.4E-13 T 15-10-2018 IPR011101 Protein of unknown function DUF5131 D934_13910 762bf5d8d8fec7cdedb9170e032839e7 236 Gene3D G3DSA:3.10.450.230 93 236 2.1E-48 T 15-10-2018 D934_13910 762bf5d8d8fec7cdedb9170e032839e7 236 SUPERFAMILY SSF54427 97 235 3.72E-39 T 15-10-2018 IPR032710 NTF2-like domain superfamily D934_13910 762bf5d8d8fec7cdedb9170e032839e7 236 Pfam PF04335 VirB8 protein 24 233 5.7E-47 T 15-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 D934_13910 762bf5d8d8fec7cdedb9170e032839e7 236 PIRSF PIRSF003299 10 236 8.2E-90 T 15-10-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 D934_07495 2ff616e0c870acbe633b66478ee2218d 424 Gene3D G3DSA:3.40.50.720 18 423 2.2E-171 T 15-10-2018 D934_07495 2ff616e0c870acbe633b66478ee2218d 424 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 105 341 6.3E-108 T 15-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D934_07495 2ff616e0c870acbe633b66478ee2218d 424 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 25 103 3.5E-33 T 15-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D934_07495 2ff616e0c870acbe633b66478ee2218d 424 Pfam PF07055 Enoyl reductase FAD binding domain 350 413 4.2E-29 T 15-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D934_07495 2ff616e0c870acbe633b66478ee2218d 424 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 24 419 54.889 T 15-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D934_08540 1b987729b6276f747c2e74feb2ca0867 281 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 173 275 4.1E-21 T 15-10-2018 IPR006528 Phage head morphogenesis domain D934_08540 1b987729b6276f747c2e74feb2ca0867 281 Pfam PF04233 Phage Mu protein F like protein 167 272 1.4E-27 T 15-10-2018 IPR006528 Phage head morphogenesis domain D934_06650 1b987729b6276f747c2e74feb2ca0867 281 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 173 275 4.1E-21 T 15-10-2018 IPR006528 Phage head morphogenesis domain D934_06650 1b987729b6276f747c2e74feb2ca0867 281 Pfam PF04233 Phage Mu protein F like protein 167 272 1.4E-27 T 15-10-2018 IPR006528 Phage head morphogenesis domain D934_00945 9ff0d5717bd328b88aa012413d887ed6 271 Pfam PF01435 Peptidase family M48 61 246 2.1E-35 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 D934_00945 9ff0d5717bd328b88aa012413d887ed6 271 Gene3D G3DSA:3.30.2010.10 60 141 2.0E-5 T 15-10-2018 D934_12475 48b67932fef2629ffc272b3f0ad934af 90 SUPERFAMILY SSF52833 6 80 2.24E-10 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_12475 48b67932fef2629ffc272b3f0ad934af 90 Gene3D G3DSA:3.40.30.10 5 90 1.3E-22 T 15-10-2018 D934_12475 48b67932fef2629ffc272b3f0ad934af 90 Pfam PF01323 DSBA-like thioredoxin domain 8 90 4.6E-17 T 15-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 D934_12380 f322dffca4aecbd69e98a4f8c81d9809 102 Gene3D G3DSA:1.10.260.40 36 98 1.1E-5 T 15-10-2018 D934_12380 f322dffca4aecbd69e98a4f8c81d9809 102 SUPERFAMILY SSF47413 34 96 6.1E-10 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_12380 f322dffca4aecbd69e98a4f8c81d9809 102 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 11 98 8.8E-38 T 15-10-2018 IPR014057 Uncharacterized protein HI1420 D934_03925 0bb3a59d2868ec9750c0219d3d9f172c 554 Gene3D G3DSA:3.40.50.300 1 285 1.1E-123 T 15-10-2018 D934_03925 0bb3a59d2868ec9750c0219d3d9f172c 554 SUPERFAMILY SSF52317 290 543 2.52E-79 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_03925 0bb3a59d2868ec9750c0219d3d9f172c 554 Pfam PF00117 Glutamine amidotransferase class-I 303 538 6.2E-53 T 15-10-2018 IPR017926 Glutamine amidotransferase D934_03925 0bb3a59d2868ec9750c0219d3d9f172c 554 SUPERFAMILY SSF52540 2 266 4.56E-118 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_03925 0bb3a59d2868ec9750c0219d3d9f172c 554 Hamap MF_01227 CTP synthase [pyrG]. 2 543 51.123 T 15-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 D934_03925 0bb3a59d2868ec9750c0219d3d9f172c 554 TIGRFAM TIGR00337 PyrG: CTP synthase 4 538 4.0E-238 T 15-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 D934_03925 0bb3a59d2868ec9750c0219d3d9f172c 554 Pfam PF06418 CTP synthase N-terminus 5 265 2.2E-121 T 15-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 D934_03925 0bb3a59d2868ec9750c0219d3d9f172c 554 Gene3D G3DSA:3.40.50.880 288 546 1.5E-95 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_08355 2623ea01c71d238b97a97baa85013810 147 SUPERFAMILY SSF50249 3 146 3.77E-46 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold D934_08355 2623ea01c71d238b97a97baa85013810 147 PIRSF PIRSF002070 1 146 3.3E-30 T 15-10-2018 D934_08355 2623ea01c71d238b97a97baa85013810 147 Hamap MF_00984 Single-stranded DNA-binding protein. 5 109 33.435 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D934_08355 2623ea01c71d238b97a97baa85013810 147 Gene3D G3DSA:2.40.50.140 1 121 5.7E-41 T 15-10-2018 D934_08355 2623ea01c71d238b97a97baa85013810 147 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 146 2.5E-41 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D934_08355 2623ea01c71d238b97a97baa85013810 147 Pfam PF00436 Single-strand binding protein family 5 105 2.6E-35 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 D934_03940 88b1e6402379275b8b4f8026e6b6c1c5 118 Pfam PF04977 Septum formation initiator 14 92 7.4E-29 T 15-10-2018 IPR007060 Septum formation initiator FtsL/DivIC D934_03940 88b1e6402379275b8b4f8026e6b6c1c5 118 Hamap MF_00599 Cell division protein FtsB [ftsB]. 5 93 33.229 T 15-10-2018 IPR023081 Cell division protein FtsB D934_08060 b51bea30dd61c99788d85492f939de17 178 Pfam PF02470 MlaD protein 39 117 5.4E-22 T 15-10-2018 IPR003399 Mce/MlaD D934_08060 b51bea30dd61c99788d85492f939de17 178 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 5 148 3.5E-50 T 15-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 D934_02280 70ed3ac1ba943e0b89febff50c1577dc 93 Gene3D G3DSA:2.40.30.170 2 58 1.1E-5 T 15-10-2018 D934_02280 70ed3ac1ba943e0b89febff50c1577dc 93 Gene3D G3DSA:2.40.420.20 64 92 1.1E-5 T 15-10-2018 D934_13735 676bf711febad89c47b5c337a57a9921 334 Pfam PF03432 Relaxase/Mobilisation nuclease domain 39 217 6.9E-13 T 15-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 D934_13735 676bf711febad89c47b5c337a57a9921 334 Gene3D G3DSA:3.30.930.30 21 225 8.6E-7 T 15-10-2018 D934_13920 4f2a43555be28139d306b6fb75ba41c3 432 Gene3D G3DSA:2.40.128.260 237 366 1.4E-44 T 15-10-2018 D934_13920 4f2a43555be28139d306b6fb75ba41c3 432 Gene3D G3DSA:2.40.128.260 367 432 3.2E-5 T 15-10-2018 D934_13920 4f2a43555be28139d306b6fb75ba41c3 432 Pfam PF03743 Bacterial conjugation TrbI-like protein 244 424 8.3E-54 T 15-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI D934_03705 2a690b5798962e9d81cec6eb286bdd65 1273 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 943 1272 4.0E-53 T 15-10-2018 IPR007452 Translocation and assembly module TamB D934_11005 865cf75d5faa60d24e7c9ecf2a8cd884 184 SUPERFAMILY SSF53271 6 183 8.26E-45 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like D934_11005 865cf75d5faa60d24e7c9ecf2a8cd884 184 Pfam PF00156 Phosphoribosyl transferase domain 16 166 1.7E-22 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 D934_11005 865cf75d5faa60d24e7c9ecf2a8cd884 184 Gene3D G3DSA:3.40.50.2020 2 184 8.6E-45 T 15-10-2018 D934_01800 fd7f72cd92ca26e7abe16df4e0616187 220 SMART SM00563 70 182 1.3E-30 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D934_01800 fd7f72cd92ca26e7abe16df4e0616187 220 SUPERFAMILY SSF69593 45 193 1.57E-19 T 15-10-2018 D934_01800 fd7f72cd92ca26e7abe16df4e0616187 220 Pfam PF01553 Acyltransferase 67 179 6.9E-13 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D934_01820 27086e9e7bdc8943b42c3f777886a8f5 150 PIRSF PIRSF004638 1 150 2.0E-41 T 15-10-2018 IPR005265 Uncharacterised protein family UPF0093 D934_01820 27086e9e7bdc8943b42c3f777886a8f5 150 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 150 1.3E-39 T 15-10-2018 IPR005265 Uncharacterised protein family UPF0093 D934_10375 586346153e5debc4eadefcb18918e17a 237 SUPERFAMILY SSF47240 75 210 2.88E-16 T 15-10-2018 IPR009078 Ferritin-like superfamily D934_10375 586346153e5debc4eadefcb18918e17a 237 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 18 237 28.963 T 15-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 D934_10375 586346153e5debc4eadefcb18918e17a 237 Gene3D G3DSA:1.20.1260.10 81 218 4.1E-5 T 15-10-2018 IPR012347 Ferritin-like D934_10375 586346153e5debc4eadefcb18918e17a 237 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 77 234 2.3E-36 T 15-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 D934_04820 618e284ef543dd916e5935ed71f403bb 260 SUPERFAMILY SSF52833 71 251 2.24E-37 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_04820 618e284ef543dd916e5935ed71f403bb 260 Pfam PF01323 DSBA-like thioredoxin domain 95 239 3.1E-10 T 15-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 D934_04820 618e284ef543dd916e5935ed71f403bb 260 Gene3D G3DSA:3.40.30.10 68 257 2.3E-49 T 15-10-2018 D934_12185 65387c383b6e9f3c7197be6f5c04fe09 98 SUPERFAMILY SSF47413 7 68 2.94E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_12185 65387c383b6e9f3c7197be6f5c04fe09 98 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 7 71 1.5E-32 T 15-10-2018 IPR031856 Putative bacterial antitoxin YdaS D934_12185 65387c383b6e9f3c7197be6f5c04fe09 98 Gene3D G3DSA:1.10.260.40 5 66 3.6E-25 T 15-10-2018 D934_11030 5da86b60ea57eb418767f03429437d0a 257 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 75 238 8.1E-50 T 15-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 D934_11030 5da86b60ea57eb418767f03429437d0a 257 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 73 239 3.7E-32 T 15-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 D934_11945 db0dd7ef8bd90b606e0a5cc24115c900 368 SUPERFAMILY SSF55326 29 191 3.14E-51 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D934_11945 db0dd7ef8bd90b606e0a5cc24115c900 368 Gene3D G3DSA:3.90.650.10 193 367 2.9E-59 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D934_11945 db0dd7ef8bd90b606e0a5cc24115c900 368 Pfam PF00586 AIR synthase related protein, N-terminal domain 83 169 5.3E-14 T 15-10-2018 IPR016188 PurM-like, N-terminal domain D934_11945 db0dd7ef8bd90b606e0a5cc24115c900 368 Gene3D G3DSA:3.30.1330.10 28 192 9.8E-68 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D934_11945 db0dd7ef8bd90b606e0a5cc24115c900 368 SUPERFAMILY SSF56042 193 361 1.06E-53 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D934_11945 db0dd7ef8bd90b606e0a5cc24115c900 368 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 29 367 45.055 T 15-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D934_11945 db0dd7ef8bd90b606e0a5cc24115c900 368 Pfam PF02769 AIR synthase related protein, C-terminal domain 198 360 9.1E-35 T 15-10-2018 IPR010918 PurM-like, C-terminal domain D934_11945 db0dd7ef8bd90b606e0a5cc24115c900 368 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 29 357 2.6E-135 T 15-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D934_02360 4f45ae0fc8ffc498a22ec685c741df8a 501 Pfam PF00361 Proton-conducting membrane transporter 129 429 5.6E-78 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02360 4f45ae0fc8ffc498a22ec685c741df8a 501 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 495 2.7E-192 T 15-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02360 4f45ae0fc8ffc498a22ec685c741df8a 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 3.3E-40 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02360 4f45ae0fc8ffc498a22ec685c741df8a 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 3.3E-40 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02360 4f45ae0fc8ffc498a22ec685c741df8a 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 386 412 3.3E-40 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02360 4f45ae0fc8ffc498a22ec685c741df8a 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 135 154 3.3E-40 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_01155 595afab416863eb1dc3f5585a9183fa4 241 SUPERFAMILY SSF53271 70 239 1.21E-27 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like D934_01155 595afab416863eb1dc3f5585a9183fa4 241 Gene3D G3DSA:3.40.50.2020 115 240 9.1E-13 T 15-10-2018 D934_06810 7db9cee06971e4f3f9530429badd4608 78 Gene3D G3DSA:1.20.5.300 1 59 2.0E-32 T 15-10-2018 D934_06810 7db9cee06971e4f3f9530429badd4608 78 Hamap MF_00715 Protein SlyX [slyX]. 12 78 13.35 T 15-10-2018 IPR007236 SlyX D934_06810 7db9cee06971e4f3f9530429badd4608 78 Pfam PF04102 SlyX 14 78 1.4E-13 T 15-10-2018 IPR007236 SlyX D934_00970 e08aa62f2208d60f8027532de45c4cc5 136 Gene3D G3DSA:3.30.420.270 63 134 4.7E-6 T 15-10-2018 D934_00970 e08aa62f2208d60f8027532de45c4cc5 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 134 4.6E-25 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 D934_03295 e68426092ccdc3bf733dd42919d69394 175 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.6E-18 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03295 e68426092ccdc3bf733dd42919d69394 175 PRINTS PR00125 ATP synthase delta subunit signature 133 148 1.6E-18 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03295 e68426092ccdc3bf733dd42919d69394 175 PRINTS PR00125 ATP synthase delta subunit signature 72 83 1.6E-18 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03295 e68426092ccdc3bf733dd42919d69394 175 PRINTS PR00125 ATP synthase delta subunit signature 148 166 1.6E-18 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03295 e68426092ccdc3bf733dd42919d69394 175 PRINTS PR00125 ATP synthase delta subunit signature 83 97 1.6E-18 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03295 e68426092ccdc3bf733dd42919d69394 175 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 173 5.7E-35 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03295 e68426092ccdc3bf733dd42919d69394 175 Gene3D G3DSA:1.10.520.20 2 104 1.2E-21 T 15-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03295 e68426092ccdc3bf733dd42919d69394 175 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 173 2.9E-43 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03295 e68426092ccdc3bf733dd42919d69394 175 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 175 17.388 T 15-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_03295 e68426092ccdc3bf733dd42919d69394 175 SUPERFAMILY SSF47928 3 103 4.18E-20 T 15-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D934_01285 af0f3a25206c528041e0cc644d990164 92 Pfam PF17209 Hfq protein 7 68 8.1E-31 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 D934_01285 af0f3a25206c528041e0cc644d990164 92 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.333 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 D934_01285 af0f3a25206c528041e0cc644d990164 92 Gene3D G3DSA:2.30.30.100 1 70 9.4E-33 T 15-10-2018 D934_01285 af0f3a25206c528041e0cc644d990164 92 SUPERFAMILY SSF50182 7 68 6.93E-24 T 15-10-2018 IPR010920 LSM domain superfamily D934_01285 af0f3a25206c528041e0cc644d990164 92 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 9.7E-30 T 15-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 D934_01030 2ffdcf652d7b8dbadc6746d2aa2d18ae 316 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 34 2.8E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site D934_01030 2ffdcf652d7b8dbadc6746d2aa2d18ae 316 Pfam PF16074 Type IV Pilus-assembly protein W 220 300 4.5E-7 T 15-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 D934_10765 fbbed45ada60f19874451c2113eff6fc 111 Gene3D G3DSA:1.20.5.780 70 110 9.1E-6 T 15-10-2018 D934_10765 fbbed45ada60f19874451c2113eff6fc 111 Pfam PF05534 HicB family 55 105 6.1E-24 T 15-10-2018 IPR008651 Uncharacterised protein family HicB D934_10765 fbbed45ada60f19874451c2113eff6fc 111 SUPERFAMILY SSF47598 70 109 1.91E-8 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 D934_00360 4d7df5fda6295113e524bc3ec81059bc 198 Pfam PF01914 MarC family integral membrane protein 3 192 5.8E-50 T 15-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 D934_06435 76512e399450fe4a9491a7399fdbb6c7 72 Pfam PF05489 Phage Tail Protein X 5 63 4.2E-27 T 15-10-2018 IPR008861 Phage Tail Protein X-like D934_06435 76512e399450fe4a9491a7399fdbb6c7 72 Gene3D G3DSA:3.10.350.10 5 72 1.6E-20 T 15-10-2018 IPR036779 LysM domain superfamily D934_07085 101080e54544af9adeff5d7e3bf7a04f 240 SUPERFAMILY SSF57938 157 187 7.98E-5 T 15-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily D934_07085 101080e54544af9adeff5d7e3bf7a04f 240 Gene3D G3DSA:2.10.230.20 150 196 4.0E-5 T 15-10-2018 D934_00125 e7297fbcffdd5047ea63d2d2f262872b 146 Gene3D G3DSA:3.10.450.30 51 145 5.1E-34 T 15-10-2018 D934_00125 e7297fbcffdd5047ea63d2d2f262872b 146 SUPERFAMILY SSF53933 58 141 9.64E-33 T 15-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 D934_00125 e7297fbcffdd5047ea63d2d2f262872b 146 Pfam PF00545 ribonuclease 59 139 2.6E-27 T 15-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 D934_06015 c3834faef815a8880f29f33dd7eb88fc 574 Pfam PF00474 Sodium:solute symporter family 66 491 1.5E-107 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D934_06015 c3834faef815a8880f29f33dd7eb88fc 574 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 66 491 2.0E-63 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D934_06015 c3834faef815a8880f29f33dd7eb88fc 574 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 181 206 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site D934_06015 c3834faef815a8880f29f33dd7eb88fc 574 Gene3D G3DSA:1.20.1730.10 52 570 6.3E-61 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily D934_09735 b8dfde7d9bd5359cbe6bb5774e1519c9 138 SMART SM00448 14 127 8.3E-35 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_09735 b8dfde7d9bd5359cbe6bb5774e1519c9 138 SUPERFAMILY SSF52172 13 132 4.13E-35 T 15-10-2018 IPR011006 CheY-like superfamily D934_09735 b8dfde7d9bd5359cbe6bb5774e1519c9 138 Gene3D G3DSA:3.40.50.12740 13 137 4.8E-37 T 15-10-2018 D934_09735 b8dfde7d9bd5359cbe6bb5774e1519c9 138 Pfam PF00072 Response regulator receiver domain 16 128 6.6E-27 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D934_12905 fe1fd7b9275f9950a0dda16699dbc1b4 359 SUPERFAMILY SSF53474 61 352 1.89E-46 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_12905 fe1fd7b9275f9950a0dda16699dbc1b4 359 PIRSF PIRSF000443 58 359 4.8E-62 T 15-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 D934_12905 fe1fd7b9275f9950a0dda16699dbc1b4 359 Pfam PF00561 alpha/beta hydrolase fold 79 340 1.3E-16 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D934_12905 fe1fd7b9275f9950a0dda16699dbc1b4 359 Gene3D G3DSA:3.40.50.1820 57 355 2.4E-63 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_07015 59d5c3974cc108866bbd3f6be1b1be9b 426 Pfam PF10926 Protein of unknown function (DUF2800) 4 391 2.8E-111 T 15-10-2018 IPR021229 Protein of unknown function DUF2800 D934_02735 13aeccdce9a0dafcfec2b64c09efcc20 255 Gene3D G3DSA:3.40.1180.10 2 234 2.6E-91 T 15-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 D934_02735 13aeccdce9a0dafcfec2b64c09efcc20 255 SUPERFAMILY SSF64005 11 235 1.7E-85 T 15-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 D934_02735 13aeccdce9a0dafcfec2b64c09efcc20 255 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 185 202 - T 15-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 D934_02735 13aeccdce9a0dafcfec2b64c09efcc20 255 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 12 239 7.7E-84 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 D934_02735 13aeccdce9a0dafcfec2b64c09efcc20 255 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 239 3.7E-79 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 D934_02735 13aeccdce9a0dafcfec2b64c09efcc20 255 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 240 39.323 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 D934_00375 affb7938e321d7c9f8bc47f36c54796f 167 PIRSF PIRSF001338 5 167 7.1E-64 T 15-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 D934_00375 affb7938e321d7c9f8bc47f36c54796f 167 Pfam PF00731 AIR carboxylase 10 157 1.4E-59 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 D934_00375 affb7938e321d7c9f8bc47f36c54796f 167 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 164 5.7E-61 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 D934_00375 affb7938e321d7c9f8bc47f36c54796f 167 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 31.461 T 15-10-2018 IPR033747 Class I PurE D934_00375 affb7938e321d7c9f8bc47f36c54796f 167 Gene3D G3DSA:3.40.50.7700 1 166 1.7E-68 T 15-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 D934_00375 affb7938e321d7c9f8bc47f36c54796f 167 SUPERFAMILY SSF52255 7 165 1.44E-63 T 15-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 D934_00375 affb7938e321d7c9f8bc47f36c54796f 167 SMART SM01001 8 159 6.1E-92 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 D934_05030 2fae1a7d9c4ed169c19cce9b5d6488ac 223 Gene3D G3DSA:3.30.450.40 43 221 3.7E-41 T 15-10-2018 IPR029016 GAF-like domain superfamily D934_05030 2fae1a7d9c4ed169c19cce9b5d6488ac 223 Pfam PF04340 Protein of unknown function, DUF484 4 223 5.5E-83 T 15-10-2018 IPR007435 Protein of unknown function DUF484 D934_13915 fac32f14623e3e5f1b484dc0f222dc31 259 Pfam PF03524 Conjugal transfer protein 21 234 2.7E-52 T 15-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX D934_13915 fac32f14623e3e5f1b484dc0f222dc31 259 Gene3D G3DSA:2.60.40.2500 130 258 2.1E-31 T 15-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily D934_05675 660b8e19a44996e90f6de38defa30f80 280 Pfam PF05590 Xylella fastidiosa protein of unknown function (DUF769) 25 280 4.8E-134 T 15-10-2018 IPR008487 Protein of unknown function DUF769 D934_00160 a48dbf2e8694d3ec54c59dad1ac60b37 289 Pfam PF01435 Peptidase family M48 76 285 1.9E-37 T 15-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 D934_00160 a48dbf2e8694d3ec54c59dad1ac60b37 289 Gene3D G3DSA:3.30.2010.10 65 158 1.6E-33 T 15-10-2018 D934_00160 a48dbf2e8694d3ec54c59dad1ac60b37 289 Hamap MF_00188 Protease HtpX [htpX]. 2 287 24.696 T 15-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 D934_07880 ed070bb2e3902f230b4873b0693be0c2 113 SUPERFAMILY SSF144091 4 111 7.72E-10 T 15-10-2018 D934_01590 4b9f4d4fbc40db1c253a926b28a2c44a 219 SUPERFAMILY SSF53271 2 202 1.02E-43 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like D934_01590 4b9f4d4fbc40db1c253a926b28a2c44a 219 Gene3D G3DSA:3.40.50.2020 1 218 1.3E-66 T 15-10-2018 D934_01590 4b9f4d4fbc40db1c253a926b28a2c44a 219 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 219 29.662 T 15-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_01590 4b9f4d4fbc40db1c253a926b28a2c44a 219 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 189 1.7E-53 T 15-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D934_01590 4b9f4d4fbc40db1c253a926b28a2c44a 219 Pfam PF00156 Phosphoribosyl transferase domain 46 158 1.0E-14 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 D934_11970 b308f324722adee3f8f35e3b3062d1b9 217 Hamap MF_00165 Thymidylate kinase [tmk]. 10 200 20.759 T 15-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 D934_11970 b308f324722adee3f8f35e3b3062d1b9 217 SUPERFAMILY SSF52540 9 200 4.23E-36 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_11970 b308f324722adee3f8f35e3b3062d1b9 217 Pfam PF02223 Thymidylate kinase 14 189 8.8E-36 T 15-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 D934_11970 b308f324722adee3f8f35e3b3062d1b9 217 Gene3D G3DSA:3.40.50.300 8 202 9.6E-45 T 15-10-2018 D934_11970 b308f324722adee3f8f35e3b3062d1b9 217 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 9 188 8.3E-37 T 15-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 D934_06740 53d7d02e4d4bb1c67d67cecbe2bafdd0 213 Gene3D G3DSA:2.40.50.230 28 126 5.8E-25 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily D934_08630 53d7d02e4d4bb1c67d67cecbe2bafdd0 213 Gene3D G3DSA:2.40.50.230 28 126 5.8E-25 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily D934_12335 53d7d02e4d4bb1c67d67cecbe2bafdd0 213 Gene3D G3DSA:2.40.50.230 28 126 5.8E-25 T 15-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily D934_02320 458ee582098d6b3926b91b1e0fb4cab3 175 PIRSF PIRSF000216 8 175 5.1E-51 T 15-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02320 458ee582098d6b3926b91b1e0fb4cab3 175 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 174 9.1E-62 T 15-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D934_02320 458ee582098d6b3926b91b1e0fb4cab3 175 Gene3D G3DSA:1.10.10.1590 18 90 5.5E-21 T 15-10-2018 D934_02320 458ee582098d6b3926b91b1e0fb4cab3 175 SUPERFAMILY SSF52833 20 174 5.37E-46 T 15-10-2018 IPR036249 Thioredoxin-like superfamily D934_02320 458ee582098d6b3926b91b1e0fb4cab3 175 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 27 174 2.3E-46 T 15-10-2018 D934_02320 458ee582098d6b3926b91b1e0fb4cab3 175 Gene3D G3DSA:3.40.30.10 92 175 1.9E-22 T 15-10-2018 D934_07280 0b28ed30921c5dc49abfd33107effde9 389 SUPERFAMILY SSF48452 130 383 2.75E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_07280 0b28ed30921c5dc49abfd33107effde9 389 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 15 379 2.3E-45 T 15-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 D934_07280 0b28ed30921c5dc49abfd33107effde9 389 Pfam PF07219 HemY protein N-terminus 33 132 1.7E-15 T 15-10-2018 IPR010817 HemY, N-terminal D934_06170 3076be6850327beccc14e59ffd8ef950 127 Gene3D G3DSA:3.90.20.10 48 111 2.4E-7 T 15-10-2018 D934_03440 62fb7c5d7763b6724851b0eb89ee3bba 126 Gene3D G3DSA:3.90.1030.10 1 116 3.7E-41 T 15-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03440 62fb7c5d7763b6724851b0eb89ee3bba 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 116 1.0E-41 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03440 62fb7c5d7763b6724851b0eb89ee3bba 126 Pfam PF01196 Ribosomal protein L17 20 115 3.7E-29 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03440 62fb7c5d7763b6724851b0eb89ee3bba 126 SUPERFAMILY SSF64263 1 119 6.15E-46 T 15-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03440 62fb7c5d7763b6724851b0eb89ee3bba 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.248 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03440 62fb7c5d7763b6724851b0eb89ee3bba 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_05560 1f4b9f9780f9b76585ecd8050b68ac58 103 Gene3D G3DSA:2.160.10.10 2 101 8.7E-11 T 15-10-2018 D934_05560 1f4b9f9780f9b76585ecd8050b68ac58 103 SUPERFAMILY SSF51161 20 82 2.22E-11 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily D934_01085 c018c3c43e42ec6f1e14b79fe917efbd 179 Gene3D G3DSA:3.40.630.30 13 178 9.4E-29 T 15-10-2018 D934_01085 c018c3c43e42ec6f1e14b79fe917efbd 179 Pfam PF13302 Acetyltransferase (GNAT) domain 22 160 3.3E-9 T 15-10-2018 IPR000182 GNAT domain D934_01085 c018c3c43e42ec6f1e14b79fe917efbd 179 SUPERFAMILY SSF55729 22 166 2.66E-15 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase D934_04260 ce31e743037e40e3252284965ee5477a 301 Pfam PF01040 UbiA prenyltransferase family 21 273 3.8E-55 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 D934_04260 ce31e743037e40e3252284965ee5477a 301 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 6 290 5.3E-90 T 15-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 D934_04260 ce31e743037e40e3252284965ee5477a 301 Gene3D G3DSA:1.10.357.140 13 191 1.9E-18 T 15-10-2018 D934_04260 ce31e743037e40e3252284965ee5477a 301 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 4 292 19.539 T 15-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 D934_04260 ce31e743037e40e3252284965ee5477a 301 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 62 84 - T 15-10-2018 IPR030470 UbiA prenyltransferase conserved site D934_11575 2aef52f457138ca48a71af8e0e4caf24 117 Pfam PF07238 PilZ domain 13 103 8.3E-7 T 15-10-2018 IPR009875 PilZ domain GO:0035438 D934_11575 2aef52f457138ca48a71af8e0e4caf24 117 Gene3D G3DSA:2.40.10.220 1 117 1.4E-42 T 15-10-2018 D934_07390 66ef711c2f42b41ac4e5dc1690ca104e 317 SUPERFAMILY SSF52540 19 290 1.45E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_07390 66ef711c2f42b41ac4e5dc1690ca104e 317 Gene3D G3DSA:1.10.8.300 211 314 5.3E-26 T 15-10-2018 D934_07390 66ef711c2f42b41ac4e5dc1690ca104e 317 Gene3D G3DSA:3.40.50.300 10 210 3.8E-44 T 15-10-2018 D934_07390 66ef711c2f42b41ac4e5dc1690ca104e 317 PIRSF PIRSF002849 2 317 7.6E-119 T 15-10-2018 D934_07390 66ef711c2f42b41ac4e5dc1690ca104e 317 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 48 178 2.3E-62 T 15-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 D934_06870 76d7b0c7dfcf78218a8f3933e6c14370 455 Pfam PF00144 Beta-lactamase 68 395 2.3E-64 T 15-10-2018 IPR001466 Beta-lactamase-related D934_06870 76d7b0c7dfcf78218a8f3933e6c14370 455 SUPERFAMILY SSF56601 62 402 2.47E-74 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D934_06870 76d7b0c7dfcf78218a8f3933e6c14370 455 Gene3D G3DSA:3.40.710.10 57 396 3.4E-77 T 15-10-2018 D934_01875 c5aa6009ca71d394ef017c2e164da753 168 Gene3D G3DSA:1.10.10.10 15 162 5.1E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_01875 c5aa6009ca71d394ef017c2e164da753 168 Pfam PF01047 MarR family 52 112 2.3E-12 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_01875 c5aa6009ca71d394ef017c2e164da753 168 SUPERFAMILY SSF46785 26 162 3.33E-27 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D934_01875 c5aa6009ca71d394ef017c2e164da753 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 4.4E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_01875 c5aa6009ca71d394ef017c2e164da753 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 4.4E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_01875 c5aa6009ca71d394ef017c2e164da753 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 4.4E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_01875 c5aa6009ca71d394ef017c2e164da753 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 4.4E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_01875 c5aa6009ca71d394ef017c2e164da753 168 SMART SM00347 45 147 1.3E-19 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D934_02990 43624b7de48c827efb9e2ac12bc50d0f 210 Pfam PF05136 Phage portal protein, lambda family 4 78 7.0E-20 T 15-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 D934_02990 43624b7de48c827efb9e2ac12bc50d0f 210 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 1 185 5.8E-86 T 15-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 D934_03630 d1b8024564d996f5a1ad113be60302da 420 Pfam PF13437 HlyD family secretion protein 264 388 5.5E-15 T 15-10-2018 D934_03630 d1b8024564d996f5a1ad113be60302da 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 332 1.3E-17 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D934_03630 d1b8024564d996f5a1ad113be60302da 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 79 99 1.3E-17 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D934_03630 d1b8024564d996f5a1ad113be60302da 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 332 355 1.3E-17 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D934_03630 d1b8024564d996f5a1ad113be60302da 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 385 400 1.3E-17 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D934_03630 d1b8024564d996f5a1ad113be60302da 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 400 420 1.3E-17 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D934_03630 d1b8024564d996f5a1ad113be60302da 420 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 275 296 1.3E-17 T 15-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D934_03630 d1b8024564d996f5a1ad113be60302da 420 Gene3D G3DSA:2.40.30.170 55 398 8.6E-16 T 15-10-2018 D934_03630 d1b8024564d996f5a1ad113be60302da 420 Gene3D G3DSA:2.40.50.100 66 299 8.6E-16 T 15-10-2018 D934_03630 d1b8024564d996f5a1ad113be60302da 420 Gene3D G3DSA:1.10.287.470 101 253 8.6E-16 T 15-10-2018 D934_13800 1d49d5a636cd5cd84b7480479115f0f7 71 Pfam PF11455 Protein of unknown function (DUF3018) 5 69 3.0E-29 T 15-10-2018 IPR021558 Protein of unknown function DUF3018 D934_12525 a8ee2f4c6a3c6eb07c14685ce854c5fe 127 SUPERFAMILY SSF110069 7 127 1.18E-46 T 15-10-2018 IPR036767 ApaG domain superfamily D934_12525 a8ee2f4c6a3c6eb07c14685ce854c5fe 127 Pfam PF04379 ApaG domain 20 104 1.1E-33 T 15-10-2018 IPR007474 ApaG domain D934_12525 a8ee2f4c6a3c6eb07c14685ce854c5fe 127 Gene3D G3DSA:2.60.40.1470 1 127 1.4E-46 T 15-10-2018 IPR036767 ApaG domain superfamily D934_12525 a8ee2f4c6a3c6eb07c14685ce854c5fe 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 31.763 T 15-10-2018 IPR023065 Uncharacterised protein family ApaG D934_13250 776b440ee8871fefbc0cd664c08b76ff 144 SUPERFAMILY SSF54637 9 142 2.46E-12 T 15-10-2018 IPR029069 HotDog domain superfamily D934_13250 776b440ee8871fefbc0cd664c08b76ff 144 Gene3D G3DSA:3.10.129.10 3 143 3.3E-6 T 15-10-2018 D934_07175 0bee36a68eb284af900c7616df83223e 500 SUPERFAMILY SSF49899 281 477 1.05E-6 T 15-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D934_07175 0bee36a68eb284af900c7616df83223e 500 Gene3D G3DSA:2.60.120.200 219 485 1.2E-8 T 15-10-2018 D934_07175 0bee36a68eb284af900c7616df83223e 500 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 292 448 4.9E-7 T 15-10-2018 D934_06485 38963837fd919b310b7e42a96ab80b76 273 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 2 269 2.0E-80 T 15-10-2018 IPR019276 Protein of unkown function DUF2303 D934_13290 79e4f17753d357eb30b725d16b3a0bb1 326 SUPERFAMILY SSF55298 225 323 1.63E-5 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 D934_13290 79e4f17753d357eb30b725d16b3a0bb1 326 Gene3D G3DSA:3.30.1330.40 207 325 1.2E-10 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 D934_08380 fbc7432e9840548f26d8361bfc64e706 311 Pfam PF03837 RecT family 19 206 4.6E-24 T 15-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 D934_08380 fbc7432e9840548f26d8361bfc64e706 311 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 6 203 5.0E-70 T 15-10-2018 IPR010183 Bacteriophage lambda, Bet D934_08350 186a88106b6ce2fa7047d0842b42bbf0 84 Pfam PF13986 Domain of unknown function (DUF4224) 17 60 3.3E-13 T 15-10-2018 IPR025319 Domain of unknown function DUF4224 D934_11785 1b4fced8cd304b91872f2e6b0280ec5c 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 9 259 5.2E-88 T 15-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D934_11785 1b4fced8cd304b91872f2e6b0280ec5c 269 SUPERFAMILY SSF53613 9 261 9.82E-74 T 15-10-2018 IPR029056 Ribokinase-like D934_11785 1b4fced8cd304b91872f2e6b0280ec5c 269 Pfam PF08543 Phosphomethylpyrimidine kinase 16 258 1.2E-87 T 15-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 D934_11785 1b4fced8cd304b91872f2e6b0280ec5c 269 Gene3D G3DSA:3.40.1190.20 2 267 2.5E-92 T 15-10-2018 IPR029056 Ribokinase-like D934_02210 cc9d91eeb29b5433fdf3c5be0894c170 72 SUPERFAMILY SSF89447 3 43 5.41E-11 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily D934_02210 cc9d91eeb29b5433fdf3c5be0894c170 72 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 42 2.4E-9 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D934_02210 cc9d91eeb29b5433fdf3c5be0894c170 72 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 4 43 1.7E-12 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D934_02210 cc9d91eeb29b5433fdf3c5be0894c170 72 SMART SM00966 3 48 8.4E-11 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D934_02210 cc9d91eeb29b5433fdf3c5be0894c170 72 Gene3D G3DSA:2.10.260.10 2 41 1.7E-11 T 15-10-2018 D934_07410 73cbea07f7914b8a586912ea8e76c0c7 64 SUPERFAMILY SSF57829 2 55 3.42E-18 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 D934_07410 73cbea07f7914b8a586912ea8e76c0c7 64 Pfam PF01783 Ribosomal L32p protein family 2 55 7.6E-20 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_07410 73cbea07f7914b8a586912ea8e76c0c7 64 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.4E-19 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_07410 73cbea07f7914b8a586912ea8e76c0c7 64 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.135 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_03655 1904af6076642c0673d3071b5802be95 259 Pfam PF01061 ABC-2 type transporter 15 224 2.8E-35 T 15-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 D934_03655 1904af6076642c0673d3071b5802be95 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 1.2E-5 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D934_03655 1904af6076642c0673d3071b5802be95 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 64 86 1.2E-5 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D934_03655 1904af6076642c0673d3071b5802be95 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 108 133 1.2E-5 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D934_03655 1904af6076642c0673d3071b5802be95 259 PIRSF PIRSF006648 1 259 2.6E-27 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D934_00055 de5659b7900f6cb4be603ac0687dbc29 208 Pfam PF13211 Protein of unknown function (DUF4019) 91 197 1.3E-26 T 15-10-2018 IPR025091 Protein of unknown function DUF4019 D934_12875 38aea19d5f7279607b09b7aaa70d51a4 218 SUPERFAMILY SSF56925 44 218 1.57E-17 T 15-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D934_12875 38aea19d5f7279607b09b7aaa70d51a4 218 Pfam PF03922 OmpW family 49 218 1.5E-52 T 15-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 D934_12875 38aea19d5f7279607b09b7aaa70d51a4 218 Gene3D G3DSA:2.40.160.20 34 218 1.3E-31 T 15-10-2018 D934_05540 62a4002c5f5ee77b53d7e632eb2cef25 157 Hamap MF_00598 Protein Smg [smg]. 5 157 28.394 T 15-10-2018 IPR007456 Smg D934_05540 62a4002c5f5ee77b53d7e632eb2cef25 157 Pfam PF04361 Protein of unknown function (DUF494) 6 157 1.2E-52 T 15-10-2018 IPR007456 Smg D934_11405 0edec9ba8999e7a324fbc7423c6a1e26 278 Gene3D G3DSA:1.10.3720.10 4 269 3.3E-66 T 15-10-2018 IPR035906 MetI-like superfamily D934_11405 0edec9ba8999e7a324fbc7423c6a1e26 278 SUPERFAMILY SSF161098 8 278 4.36E-72 T 15-10-2018 IPR035906 MetI-like superfamily D934_11405 0edec9ba8999e7a324fbc7423c6a1e26 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 267 2.5E-21 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D934_03950 8c42841b9556ea47b80d6f47d4c6a629 167 Pfam PF02542 YgbB family 6 159 2.2E-61 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D934_03950 8c42841b9556ea47b80d6f47d4c6a629 167 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 40 55 - T 15-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D934_03950 8c42841b9556ea47b80d6f47d4c6a629 167 Gene3D G3DSA:3.30.1330.50 4 166 1.5E-65 T 15-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D934_03950 8c42841b9556ea47b80d6f47d4c6a629 167 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 6 161 34.18 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D934_03950 8c42841b9556ea47b80d6f47d4c6a629 167 SUPERFAMILY SSF69765 5 162 5.1E-63 T 15-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D934_03950 8c42841b9556ea47b80d6f47d4c6a629 167 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 7 160 1.3E-68 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D934_00320 a001b62c07fc9b3ad7f7746604894437 189 SUPERFAMILY SSF55846 22 181 2.36E-32 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D934_00320 a001b62c07fc9b3ad7f7746604894437 189 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 26 170 1.1E-21 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D934_00320 a001b62c07fc9b3ad7f7746604894437 189 SMART SM00644 16 159 2.8E-28 T 15-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D934_00320 a001b62c07fc9b3ad7f7746604894437 189 Gene3D G3DSA:3.40.80.10 18 184 2.7E-30 T 15-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D934_05170 e9360f96529fc5b06c3074226653f3f9 650 Pfam PF05876 Phage terminase large subunit (GpA) 44 596 7.6E-168 T 15-10-2018 IPR008866 Bacteriophage lambda, GpA D934_05170 e9360f96529fc5b06c3074226653f3f9 650 Gene3D G3DSA:3.40.50.300 20 236 6.0E-12 T 15-10-2018 D934_10795 915a206adcb125142f183f75db5a3f94 280 SUPERFAMILY SSF53474 14 264 2.55E-52 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_10795 915a206adcb125142f183f75db5a3f94 280 Gene3D G3DSA:3.40.50.1820 12 273 3.3E-52 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_10795 915a206adcb125142f183f75db5a3f94 280 Pfam PF12146 Serine aminopeptidase, S33 66 255 3.3E-17 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 D934_10795 915a206adcb125142f183f75db5a3f94 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 66 81 5.7E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D934_10795 915a206adcb125142f183f75db5a3f94 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 5.7E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D934_10795 915a206adcb125142f183f75db5a3f94 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 5.7E-8 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D934_08510 5037306d5a5e17342a7b47fd6b04c7cc 64 ProDom PD272324 XF1567/XF1672 1 62 1.0E-26 T 15-10-2018 IPR020247 Uncharacterised protein family XF1567 D934_06620 5037306d5a5e17342a7b47fd6b04c7cc 64 ProDom PD272324 XF1567/XF1672 1 62 1.0E-26 T 15-10-2018 IPR020247 Uncharacterised protein family XF1567 D934_09210 60ec21b297227bf645378e8d69d36eab 107 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 103 1.0E-19 T 15-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 D934_09210 60ec21b297227bf645378e8d69d36eab 107 SUPERFAMILY SSF50118 1 106 6.7E-24 T 15-10-2018 D934_09210 60ec21b297227bf645378e8d69d36eab 107 Gene3D G3DSA:2.30.30.110 13 106 2.5E-19 T 15-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor D934_11345 e4ff7559b3b98f0c50a703e6aa1fb2dd 325 SUPERFAMILY SSF64153 158 230 4.32E-5 T 15-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 D934_11345 e4ff7559b3b98f0c50a703e6aa1fb2dd 325 Pfam PF00953 Glycosyl transferase family 4 77 214 3.0E-25 T 15-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 D934_11655 7fff02b50c40ba24997e0c2e1915e86f 291 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site D934_11655 7fff02b50c40ba24997e0c2e1915e86f 291 SUPERFAMILY SSF48576 5 283 2.34E-82 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily D934_11655 7fff02b50c40ba24997e0c2e1915e86f 291 Pfam PF00348 Polyprenyl synthetase 29 255 1.9E-54 T 15-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 D934_11655 7fff02b50c40ba24997e0c2e1915e86f 291 Gene3D G3DSA:1.10.600.10 2 288 3.3E-90 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily D934_11655 7fff02b50c40ba24997e0c2e1915e86f 291 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 210 222 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site D934_11070 6cb1c53bb780c1ee319372c82a1d4e44 467 Pfam PF13807 G-rich domain on putative tyrosine kinase 381 453 3.2E-15 T 15-10-2018 IPR032807 Tyrosine kinase, G-rich domain D934_11070 6cb1c53bb780c1ee319372c82a1d4e44 467 Pfam PF02706 Chain length determinant protein 20 110 8.6E-10 T 15-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 D934_08950 7e6c7c62d49302ee43d13376d7db7865 319 Gene3D G3DSA:1.10.260.40 1 54 3.9E-8 T 15-10-2018 D934_08950 7e6c7c62d49302ee43d13376d7db7865 319 SUPERFAMILY SSF47413 1 53 2.82E-6 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_08950 7e6c7c62d49302ee43d13376d7db7865 319 Pfam PF00717 Peptidase S24-like 222 284 1.3E-8 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D934_08950 7e6c7c62d49302ee43d13376d7db7865 319 Gene3D G3DSA:1.10.260.40 66 132 4.5E-16 T 15-10-2018 D934_08950 7e6c7c62d49302ee43d13376d7db7865 319 SUPERFAMILY SSF51306 182 311 2.75E-20 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily D934_08950 7e6c7c62d49302ee43d13376d7db7865 319 SUPERFAMILY SSF47413 65 125 1.07E-11 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_08950 7e6c7c62d49302ee43d13376d7db7865 319 SMART SM00530 1 49 3.2 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_08950 7e6c7c62d49302ee43d13376d7db7865 319 SMART SM00530 69 125 6.3E-12 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_08950 7e6c7c62d49302ee43d13376d7db7865 319 Pfam PF01381 Helix-turn-helix 1 49 3.6E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_08950 7e6c7c62d49302ee43d13376d7db7865 319 Pfam PF01381 Helix-turn-helix 70 125 3.6E-9 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_08950 7e6c7c62d49302ee43d13376d7db7865 319 Gene3D G3DSA:2.10.109.10 183 314 2.7E-10 T 15-10-2018 D934_04390 535f2d086be42a27613fdae0582b2c15 78 Pfam PF13986 Domain of unknown function (DUF4224) 6 48 5.3E-16 T 15-10-2018 IPR025319 Domain of unknown function DUF4224 D934_08535 a8436763a6e0bb220c312f886702aaa9 112 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 15 104 9.6E-25 T 15-10-2018 IPR009241 Toxin HigB-like D934_06645 a8436763a6e0bb220c312f886702aaa9 112 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 15 104 9.6E-25 T 15-10-2018 IPR009241 Toxin HigB-like D934_11450 fd3eb544d1d79b709af9b72a64208f8e 273 Gene3D G3DSA:3.60.110.10 5 270 1.6E-91 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D934_11450 fd3eb544d1d79b709af9b72a64208f8e 273 Pfam PF00795 Carbon-nitrogen hydrolase 10 238 4.3E-24 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 D934_11450 fd3eb544d1d79b709af9b72a64208f8e 273 SUPERFAMILY SSF56317 5 259 2.09E-53 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D934_06030 4d7a0ef541ba3f01c51840255ed04383 230 Pfam PF02659 Putative manganese efflux pump 67 222 2.7E-49 T 15-10-2018 IPR003810 Putative manganese efflux pump D934_06030 4d7a0ef541ba3f01c51840255ed04383 230 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 37 225 24.723 T 15-10-2018 IPR022929 Putative manganese efflux pump MntP D934_01810 bb402612b4d3a63ac87c638f73de2393 235 Pfam PF04367 Protein of unknown function (DUF502) 81 181 9.1E-27 T 15-10-2018 IPR007462 Protein of unknown function DUF502 D934_06975 6127f47dcb72ae824554e1aa21f49ce6 85 Pfam PF13986 Domain of unknown function (DUF4224) 19 63 8.9E-18 T 15-10-2018 IPR025319 Domain of unknown function DUF4224 D934_03890 106d9bcda301057ee2bfab9a7b5a40bc 451 Pfam PF04286 Protein of unknown function (DUF445) 67 441 1.0E-103 T 15-10-2018 IPR007383 Protein of unknown function DUF445 D934_04925 3b9fd99d7e4f803d65326b03200bda85 394 Gene3D G3DSA:3.40.50.12710 6 394 8.4E-111 T 15-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 D934_04925 3b9fd99d7e4f803d65326b03200bda85 394 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 79 322 3.5E-44 T 15-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 D934_04925 3b9fd99d7e4f803d65326b03200bda85 394 SUPERFAMILY SSF53335 21 378 1.69E-84 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D934_08360 71cd81e91c0ae0db7d43ad2d90705efd 237 Pfam PF03374 Phage antirepressor protein KilAC domain 126 231 2.0E-24 T 15-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 D934_08360 71cd81e91c0ae0db7d43ad2d90705efd 237 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 13 94 9.2E-12 T 15-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family D934_03185 765442807a836f2593fa7781f5338320 275 SUPERFAMILY SSF51730 3 274 6.47E-88 T 15-10-2018 IPR029041 FAD-linked oxidoreductase-like D934_03185 765442807a836f2593fa7781f5338320 275 Gene3D G3DSA:3.20.20.220 1 275 1.3E-94 T 15-10-2018 D934_03185 765442807a836f2593fa7781f5338320 275 Pfam PF02219 Methylenetetrahydrofolate reductase 4 274 4.4E-83 T 15-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 D934_03185 765442807a836f2593fa7781f5338320 275 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 4 273 1.4E-98 T 15-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 D934_11585 d35dd681b9653bd33b05365ebbeb45fe 367 Gene3D G3DSA:3.30.160.60 324 362 3.8E-13 T 15-10-2018 D934_11585 d35dd681b9653bd33b05365ebbeb45fe 367 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 40 358 1.3E-71 T 15-10-2018 IPR003770 Endolytic murein transglycosylase D934_11585 d35dd681b9653bd33b05365ebbeb45fe 367 Pfam PF02618 YceG-like family 62 350 7.6E-72 T 15-10-2018 IPR003770 Endolytic murein transglycosylase D934_11585 d35dd681b9653bd33b05365ebbeb45fe 367 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 18 355 31.194 T 15-10-2018 IPR003770 Endolytic murein transglycosylase D934_02890 c26631b4a93ebd1bc356baee50971317 339 SUPERFAMILY SSF52540 54 198 5.42E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_02890 c26631b4a93ebd1bc356baee50971317 339 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 22 333 2.5E-100 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 D934_02890 c26631b4a93ebd1bc356baee50971317 339 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 34 318 9.3E-65 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 D934_02890 c26631b4a93ebd1bc356baee50971317 339 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 8 338 36.234 T 15-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 D934_04535 53f3df626246840992da634e0c10c05f 408 Pfam PF11651 P22 coat protein - gene protein 5 1 407 4.0E-56 T 15-10-2018 IPR024659 Major capsid protein Gp5 D934_07520 1af1ca997d7db03fdcf9d0d05eb866ba 237 Gene3D G3DSA:2.40.128.110 61 228 1.9E-50 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D934_07520 1af1ca997d7db03fdcf9d0d05eb866ba 237 SUPERFAMILY SSF101874 61 226 5.23E-51 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D934_07520 1af1ca997d7db03fdcf9d0d05eb866ba 237 Pfam PF04264 YceI-like domain 64 226 2.4E-40 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D934_07520 1af1ca997d7db03fdcf9d0d05eb866ba 237 SMART SM00867 63 227 3.1E-66 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D934_11290 658eaff227360757c752448b28274781 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.4E-36 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_11290 658eaff227360757c752448b28274781 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.4E-36 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_11290 658eaff227360757c752448b28274781 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.4E-36 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_11290 658eaff227360757c752448b28274781 85 SUPERFAMILY SSF110324 2 81 4.19E-32 T 15-10-2018 D934_11290 658eaff227360757c752448b28274781 85 Gene3D G3DSA:2.40.50.100 21 85 1.4E-28 T 15-10-2018 D934_11290 658eaff227360757c752448b28274781 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_11290 658eaff227360757c752448b28274781 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.466 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_11290 658eaff227360757c752448b28274781 85 Pfam PF01016 Ribosomal L27 protein 2 82 5.0E-37 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_11290 658eaff227360757c752448b28274781 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 15-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D934_11290 658eaff227360757c752448b28274781 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.7E-36 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D934_08660 01ca7b34284836b7eb3b94585c26e001 387 Gene3D G3DSA:3.90.1340.10 133 191 1.1E-5 T 15-10-2018 IPR037053 Phage tail collar domain superfamily D934_08660 01ca7b34284836b7eb3b94585c26e001 387 SUPERFAMILY SSF88874 132 240 2.09E-16 T 15-10-2018 D934_08660 01ca7b34284836b7eb3b94585c26e001 387 Pfam PF07484 Phage Tail Collar Domain 139 191 2.6E-12 T 15-10-2018 IPR011083 Phage tail collar domain D934_12305 01ca7b34284836b7eb3b94585c26e001 387 Gene3D G3DSA:3.90.1340.10 133 191 1.1E-5 T 15-10-2018 IPR037053 Phage tail collar domain superfamily D934_12305 01ca7b34284836b7eb3b94585c26e001 387 SUPERFAMILY SSF88874 132 240 2.09E-16 T 15-10-2018 D934_12305 01ca7b34284836b7eb3b94585c26e001 387 Pfam PF07484 Phage Tail Collar Domain 139 191 2.6E-12 T 15-10-2018 IPR011083 Phage tail collar domain D934_11960 781b71544f759ac7e94772f59af96aa6 227 Pfam PF11306 Protein of unknown function (DUF3108) 27 221 2.2E-13 T 15-10-2018 IPR021457 Protein of unknown function DUF3108 D934_12420 f059b67b40dd626f026cf5125ea6de00 116 Pfam PF00239 Resolvase, N terminal domain 56 112 1.9E-10 T 15-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 D934_12420 f059b67b40dd626f026cf5125ea6de00 116 SUPERFAMILY SSF53041 55 112 4.19E-10 T 15-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 D934_12420 f059b67b40dd626f026cf5125ea6de00 116 Gene3D G3DSA:3.40.50.1390 51 115 6.2E-13 T 15-10-2018 D934_10640 3dbbae25f9e38306002cb2f759e515e9 340 Gene3D G3DSA:1.10.150.130 59 162 2.8E-9 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal D934_10640 3dbbae25f9e38306002cb2f759e515e9 340 SUPERFAMILY SSF56349 61 332 2.88E-37 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D934_10640 3dbbae25f9e38306002cb2f759e515e9 340 Pfam PF00589 Phage integrase family 177 332 4.3E-6 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D934_10640 3dbbae25f9e38306002cb2f759e515e9 340 Gene3D G3DSA:1.10.443.10 164 335 5.4E-19 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D934_09215 e5493ebf4604fcd283a952128dd46d8b 56 Pfam PF11455 Protein of unknown function (DUF3018) 1 55 2.8E-24 T 15-10-2018 IPR021558 Protein of unknown function DUF3018 D934_13890 9fcef31cfbf2096ad679029c7116f629 127 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 14 90 8.2E-9 T 15-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB D934_08490 a269ac77e38744c25ceb6dfa3a3a330e 112 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 28 105 1.2E-22 T 15-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system D934_05400 683d423cc3ca2b7fb16152a7de30a3bd 95 Pfam PF02562 PhoH-like protein 2 88 9.1E-21 T 15-10-2018 IPR003714 PhoH-like protein GO:0005524 D934_05400 683d423cc3ca2b7fb16152a7de30a3bd 95 SUPERFAMILY SSF52540 2 74 2.92E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D934_05400 683d423cc3ca2b7fb16152a7de30a3bd 95 Gene3D G3DSA:3.40.50.300 1 94 4.7E-26 T 15-10-2018 D934_13860 9c948e99ba50bea4daee24b0852d59e8 107 SMART SM00530 32 88 0.0045 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D934_13860 9c948e99ba50bea4daee24b0852d59e8 107 Pfam PF13744 Helix-turn-helix domain 11 89 1.8E-27 T 15-10-2018 IPR039554 HigA2-like, helix-turn-helix domain D934_13860 9c948e99ba50bea4daee24b0852d59e8 107 SUPERFAMILY SSF47413 18 103 4.22E-22 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D934_13860 9c948e99ba50bea4daee24b0852d59e8 107 Gene3D G3DSA:1.10.260.40 18 81 5.2E-23 T 15-10-2018 D934_08190 879f15a556d505621506a4d9cd11ab45 144 Pfam PF13511 Domain of unknown function (DUF4124) 27 69 9.3E-13 T 15-10-2018 IPR025392 Domain of unknown function DUF4124 D934_09305 60f136d561ab227bb3a9ec50aba98925 94 Pfam PF10734 Protein of unknown function (DUF2523) 5 83 1.1E-17 T 15-10-2018 IPR019670 Protein of unkown function DUF2523 D934_00425 f2d97204ac9b29291add9ebeeff5b157 189 Pfam PF11304 Protein of unknown function (DUF3106) 46 104 4.3E-7 T 15-10-2018 IPR021455 Protein of unknown function DUF3106 D934_04490 4a9cb252d7d31951e6ea8619e4c8db5d 166 SUPERFAMILY SSF53955 5 148 3.33E-48 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_04490 4a9cb252d7d31951e6ea8619e4c8db5d 166 Gene3D G3DSA:1.10.530.40 3 153 2.5E-50 T 15-10-2018 D934_04490 4a9cb252d7d31951e6ea8619e4c8db5d 166 Pfam PF00959 Phage lysozyme 30 137 1.1E-20 T 15-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 D934_11935 b1eabeb1b6ef0b45977dedd21640017d 385 Pfam PF01594 AI-2E family transporter 25 348 3.2E-54 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like D934_10830 67a47469e55bcac775b456379c6ff050 76 Pfam PF04255 Protein of unknown function (DUF433) 7 62 1.3E-22 T 15-10-2018 IPR007367 Protein of unknown function DUF433 D934_10830 67a47469e55bcac775b456379c6ff050 76 Gene3D G3DSA:1.10.10.10 6 75 5.1E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D934_10830 67a47469e55bcac775b456379c6ff050 76 SUPERFAMILY SSF46689 2 73 2.87E-23 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D934_11515 8ad97511639bc00cc2e5e491278663cc 565 Pfam PF00295 Glycosyl hydrolases family 28 123 456 4.2E-44 T 15-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 D934_11515 8ad97511639bc00cc2e5e491278663cc 565 SUPERFAMILY SSF51126 106 495 4.61E-55 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor D934_11515 8ad97511639bc00cc2e5e491278663cc 565 ProSitePatterns PS00502 Polygalacturonase active site. 360 373 - T 15-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 D934_11515 8ad97511639bc00cc2e5e491278663cc 565 Gene3D G3DSA:2.160.20.10 93 493 4.2E-87 T 15-10-2018 IPR012334 Pectin lyase fold D934_02740 798b8677061abadb4f3deb9381ab6ebf 190 Gene3D G3DSA:3.30.1360.40 36 110 4.1E-66 T 15-10-2018 D934_02740 798b8677061abadb4f3deb9381ab6ebf 190 TIGRFAM TIGR00496 frr: ribosome recycling factor 15 190 1.2E-69 T 15-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 D934_02740 798b8677061abadb4f3deb9381ab6ebf 190 Pfam PF01765 Ribosome recycling factor 25 188 8.3E-62 T 15-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 D934_02740 798b8677061abadb4f3deb9381ab6ebf 190 SUPERFAMILY SSF55194 6 190 9.29E-69 T 15-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 D934_02740 798b8677061abadb4f3deb9381ab6ebf 190 Hamap MF_00040 Ribosome-recycling factor [frr]. 8 190 27.05 T 15-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 D934_02740 798b8677061abadb4f3deb9381ab6ebf 190 Gene3D G3DSA:1.10.132.20 17 187 4.1E-66 T 15-10-2018 D934_12405 ddce7fa5d63c5ee69ee919ea33825afa 289 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 140 206 2.7E-8 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal D934_12405 ddce7fa5d63c5ee69ee919ea33825afa 289 Pfam PF01385 Probable transposase 55 169 1.6E-20 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 D934_12405 ddce7fa5d63c5ee69ee919ea33825afa 289 Pfam PF07282 Putative transposase DNA-binding domain 183 252 1.4E-22 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal D934_13805 eb30f44eb4000827b96758ca4208694e 367 Pfam PF04796 Plasmid encoded RepA protein 148 306 9.2E-27 T 15-10-2018 IPR006881 Plasmid encoded RepA protein D934_06800 315b42be3bf8009cfe8a2e3ad982586d 318 Gene3D G3DSA:1.10.287.460 126 206 5.7E-12 T 15-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 D934_06800 315b42be3bf8009cfe8a2e3ad982586d 318 Gene3D G3DSA:3.10.50.40 207 315 8.7E-39 T 15-10-2018 D934_06800 315b42be3bf8009cfe8a2e3ad982586d 318 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 226 314 4.3E-25 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D934_06800 315b42be3bf8009cfe8a2e3ad982586d 318 SUPERFAMILY SSF54534 133 317 3.54E-48 T 15-10-2018 D934_06800 315b42be3bf8009cfe8a2e3ad982586d 318 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 126 218 1.1E-21 T 15-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 D934_06800 315b42be3bf8009cfe8a2e3ad982586d 318 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 34 112 1.3E-8 T 15-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 D934_06800 315b42be3bf8009cfe8a2e3ad982586d 318 Gene3D G3DSA:1.10.287.460 34 125 5.6E-11 T 15-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 D934_06830 6f78e19723f16fb804e73fdecd0eaef9 401 Gene3D G3DSA:1.50.10.10 9 401 1.9E-169 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 D934_06830 6f78e19723f16fb804e73fdecd0eaef9 401 SUPERFAMILY SSF48208 11 395 6.32E-116 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 D934_06830 6f78e19723f16fb804e73fdecd0eaef9 401 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 39 389 3.2E-118 T 15-10-2018 D934_12400 25206b2898f999d2f8dd9a2fa8e490fd 38 Pfam PF11863 Protein of unknown function (DUF3383) 2 35 7.5E-9 T 15-10-2018 IPR021808 Protein of unknown function DUF3383 D934_02270 5c19661e1d7ee06fb22da3e6885bd0ca 134 Gene3D G3DSA:2.40.50.100 81 114 1.0E-12 T 15-10-2018 D934_02270 5c19661e1d7ee06fb22da3e6885bd0ca 134 Gene3D G3DSA:2.40.30.170 71 80 1.0E-12 T 15-10-2018 D934_02270 5c19661e1d7ee06fb22da3e6885bd0ca 134 Gene3D G3DSA:1.10.287.470 115 133 1.0E-12 T 15-10-2018 D934_02270 5c19661e1d7ee06fb22da3e6885bd0ca 134 SUPERFAMILY SSF111369 73 132 8.37E-9 T 15-10-2018 D934_02270 5c19661e1d7ee06fb22da3e6885bd0ca 134 Pfam PF13533 Biotin-lipoyl like 82 122 2.6E-12 T 15-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D934_11980 5d0557b7ecfa69301d3259cf1af4f455 700 Pfam PF05649 Peptidase family M13 67 444 1.0E-92 T 15-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 D934_11980 5d0557b7ecfa69301d3259cf1af4f455 700 Pfam PF01431 Peptidase family M13 496 697 1.3E-69 T 15-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D934_11980 5d0557b7ecfa69301d3259cf1af4f455 700 SUPERFAMILY SSF55486 55 700 2.34E-204 T 15-10-2018 D934_11980 5d0557b7ecfa69301d3259cf1af4f455 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 527 543 1.5E-21 T 15-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D934_11980 5d0557b7ecfa69301d3259cf1af4f455 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 506 518 1.5E-21 T 15-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D934_11980 5d0557b7ecfa69301d3259cf1af4f455 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 488 500 1.5E-21 T 15-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D934_11980 5d0557b7ecfa69301d3259cf1af4f455 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 598 609 1.5E-21 T 15-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D934_11980 5d0557b7ecfa69301d3259cf1af4f455 700 Gene3D G3DSA:1.10.1380.10 93 483 5.0E-224 T 15-10-2018 D934_11980 5d0557b7ecfa69301d3259cf1af4f455 700 Gene3D G3DSA:3.40.390.10 62 700 5.0E-224 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 D934_08000 26ba1248eca5c8c9e4ea4b1470439f1c 319 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 312 2.8E-119 T 15-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 D934_08000 26ba1248eca5c8c9e4ea4b1470439f1c 319 Pfam PF03741 Integral membrane protein TerC family 80 282 8.2E-55 T 15-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 D934_07405 d001235f34115aeb26330c94d97086b8 169 Pfam PF02620 Uncharacterized ACR, COG1399 62 167 4.1E-10 T 15-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD D934_07265 e1c442ee86a7b50dc019e6278fda7ba8 208 Pfam PF05036 Sporulation related domain 65 137 6.9E-6 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 D934_09395 ba855910b32acd2bd1d6423a92f8a89b 716 SUPERFAMILY SSF50494 29 700 3.66E-24 T 15-10-2018 IPR009003 Peptidase S1, PA clan D934_09395 ba855910b32acd2bd1d6423a92f8a89b 716 Pfam PF10459 Peptidase S46 22 713 1.3E-262 T 15-10-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 D934_09395 ba855910b32acd2bd1d6423a92f8a89b 716 Gene3D G3DSA:2.40.10.10 630 691 7.6E-6 T 15-10-2018 D934_10125 2e3678bf0608207b99e33bd315f79c65 238 SUPERFAMILY SSF54427 103 237 1.01E-14 T 15-10-2018 IPR032710 NTF2-like domain superfamily D934_10125 2e3678bf0608207b99e33bd315f79c65 238 Pfam PF04335 VirB8 protein 26 237 2.9E-46 T 15-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 D934_10125 2e3678bf0608207b99e33bd315f79c65 238 Gene3D G3DSA:3.10.450.230 133 238 2.8E-5 T 15-10-2018 D934_05815 87a345b0429d5cba1c74c15cc5b8f489 188 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.175 T 15-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 D934_05815 87a345b0429d5cba1c74c15cc5b8f489 188 SUPERFAMILY SSF51182 3 179 8.52E-41 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily D934_05815 87a345b0429d5cba1c74c15cc5b8f489 188 Gene3D G3DSA:2.60.120.10 2 157 4.0E-51 T 15-10-2018 IPR014710 RmlC-like jelly roll fold D934_05815 87a345b0429d5cba1c74c15cc5b8f489 188 Pfam PF03079 ARD/ARD' family 4 164 5.6E-33 T 15-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 D934_12045 1ed2899d9ab1df04c7f81dc62e9b8b7f 240 Pfam PF00117 Glutamine amidotransferase class-I 42 196 2.8E-19 T 15-10-2018 IPR017926 Glutamine amidotransferase D934_12045 1ed2899d9ab1df04c7f81dc62e9b8b7f 240 SUPERFAMILY SSF52317 40 204 2.52E-35 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_12045 1ed2899d9ab1df04c7f81dc62e9b8b7f 240 Gene3D G3DSA:3.40.50.880 17 239 7.0E-47 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like D934_01600 4478038a1b12eb1a2fd95520a68d84f8 271 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 5 265 1.2E-117 T 15-10-2018 IPR017483 Conserved hypothetical protein CHP03034 D934_01600 4478038a1b12eb1a2fd95520a68d84f8 271 Pfam PF11692 Protein of unknown function (DUF3289) 6 265 1.6E-100 T 15-10-2018 IPR017483 Conserved hypothetical protein CHP03034 D934_05510 81ceb2f213939b6e1808b22d531ec69e 565 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 224 4.2E-19 T 15-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like D934_01495 9860733ea9089fd22a1896723903f3a8 141 SUPERFAMILY SSF102400 1 140 7.98E-38 T 15-10-2018 IPR036768 DNA polymerase III subunit chi superfamily D934_01495 9860733ea9089fd22a1896723903f3a8 141 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 136 6.3E-34 T 15-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 D934_01495 9860733ea9089fd22a1896723903f3a8 141 Gene3D G3DSA:3.40.50.10110 1 140 2.1E-38 T 15-10-2018 IPR036768 DNA polymerase III subunit chi superfamily D934_03830 67d0d8c6b64eeffd2e41cb75d90810ed 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 4 272 72.462 T 15-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein D934_03830 67d0d8c6b64eeffd2e41cb75d90810ed 273 Pfam PF03618 Kinase/pyrophosphorylase 7 263 6.2E-69 T 15-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 D934_07130 8739ad2416748c71dd5b4861f49bd60b 408 Pfam PF11651 P22 coat protein - gene protein 5 1 407 2.3E-56 T 15-10-2018 IPR024659 Major capsid protein Gp5 D934_02490 4b4a748842fecfb0a7f844072fa26243 336 Pfam PF12146 Serine aminopeptidase, S33 73 182 9.5E-9 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 D934_02490 4b4a748842fecfb0a7f844072fa26243 336 SUPERFAMILY SSF53474 58 295 4.26E-21 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_02490 4b4a748842fecfb0a7f844072fa26243 336 Gene3D G3DSA:3.40.50.1820 53 320 9.9E-27 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold D934_12290 337578cc4a1eec93415ad966980fb825 182 Pfam PF13274 Protein of unknown function (DUF4065) 29 133 7.1E-20 T 15-10-2018 IPR025272 Domain of unknown function DUF4065 D934_07395 1578fc280680852432cfaeb4621ae36a 615 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 59 219 1.9E-13 T 15-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like D934_04415 a5a0ee973bf2f0e5321fedd2aea6afd7 433 SMART SM01040 60 148 5.9E-27 T 15-10-2018 IPR003497 BRO N-terminal domain D934_04415 a5a0ee973bf2f0e5321fedd2aea6afd7 433 SMART SM01040 194 281 2.1E-36 T 15-10-2018 IPR003497 BRO N-terminal domain D934_04415 a5a0ee973bf2f0e5321fedd2aea6afd7 433 Pfam PF02498 BRO family, N-terminal domain 195 281 1.1E-24 T 15-10-2018 IPR003497 BRO N-terminal domain D934_04415 a5a0ee973bf2f0e5321fedd2aea6afd7 433 Pfam PF02498 BRO family, N-terminal domain 61 148 1.3E-19 T 15-10-2018 IPR003497 BRO N-terminal domain D934_04425 29f3c63ac2b47d06f44a940fcbceb307 426 Pfam PF10926 Protein of unknown function (DUF2800) 4 391 1.9E-114 T 15-10-2018 IPR021229 Protein of unknown function DUF2800 D934_07330 ab03d02a100b448d30b18cee2de282b7 99 Gene3D G3DSA:1.10.1020.10 4 95 1.7E-9 T 15-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 D934_04055 d0533a3d87311e5787fee5f0791818ea 503 Gene3D G3DSA:1.25.40.10 50 482 8.4E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_04055 d0533a3d87311e5787fee5f0791818ea 503 SUPERFAMILY SSF48452 172 294 8.96E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_13765 b9cdbbdaf5f24d8c3f4ee17280ec94ea 147 Pfam PF11657 Transcriptional activator TraM 5 115 3.0E-5 T 15-10-2018 IPR028140 Protein TraM GO:0009372 D934_10115 2141bcb3d8e326e80d5a6250881a2c1c 66 SUPERFAMILY SSF101082 31 65 1.11E-5 T 15-10-2018 D934_06355 1e087f5575c2a871eecd7e87d29778e1 107 Gene3D G3DSA:2.40.10.180 11 107 2.1E-5 T 15-10-2018 D934_08330 ecc5ee5bfbb00c0c97add544ec87aa9c 1521 Pfam PF05567 Neisseria PilC beta-propeller domain 991 1323 6.1E-63 T 15-10-2018 IPR008707 PilC beta-propeller domain D934_08330 ecc5ee5bfbb00c0c97add544ec87aa9c 1521 SUPERFAMILY SSF50998 1037 1302 4.12E-7 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily D934_08790 1f7c2ceae9fba6f7b341eb1669d1678a 809 Pfam PF00912 Transglycosylase 65 235 1.6E-57 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_08790 1f7c2ceae9fba6f7b341eb1669d1678a 809 Pfam PF00905 Penicillin binding protein transpeptidase domain 424 603 5.8E-25 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 D934_08790 1f7c2ceae9fba6f7b341eb1669d1678a 809 Pfam PF17092 Penicillin-binding protein OB-like domain 322 419 2.0E-14 T 15-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_08790 1f7c2ceae9fba6f7b341eb1669d1678a 809 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 69 756 7.4E-176 T 15-10-2018 D934_08790 1f7c2ceae9fba6f7b341eb1669d1678a 809 SUPERFAMILY SSF56601 216 788 6.32E-118 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D934_08790 1f7c2ceae9fba6f7b341eb1669d1678a 809 SUPERFAMILY SSF53955 47 263 3.94E-70 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily D934_08790 1f7c2ceae9fba6f7b341eb1669d1678a 809 Gene3D G3DSA:1.10.3810.10 52 249 4.9E-69 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D934_12160 ec4e8ea4c31faa1ace972cbaa1b9e1fb 501 Pfam PF05272 Virulence-associated protein E 136 335 8.4E-82 T 15-10-2018 IPR007936 Virulence-associated E D934_11480 dd2dc39cdda92b76fe8f7295b3889dae 153 Pfam PF03100 CcmE 4 127 3.9E-38 T 15-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 D934_11480 dd2dc39cdda92b76fe8f7295b3889dae 153 Gene3D G3DSA:2.40.50.140 28 134 4.0E-33 T 15-10-2018 D934_11480 dd2dc39cdda92b76fe8f7295b3889dae 153 SUPERFAMILY SSF82093 28 133 3.53E-34 T 15-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 D934_11480 dd2dc39cdda92b76fe8f7295b3889dae 153 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 138 28.062 T 15-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 D934_12440 398d8683c4e244839fa800a05d1167be 148 Gene3D G3DSA:3.90.20.10 34 105 5.4E-10 T 15-10-2018 D934_12015 639688b53cfa52c04a2d64905b818658 301 Pfam PF04366 Las17-binding protein actin regulator 100 212 8.1E-30 T 15-10-2018 IPR007461 Ysc84 actin-binding domain D934_06175 0906560cda05786e344626755feb3491 92 SMART SM00990 5 85 1.8E-16 T 15-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 D934_06175 0906560cda05786e344626755feb3491 92 Gene3D G3DSA:3.40.1350.10 5 92 5.3E-29 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 D934_06175 0906560cda05786e344626755feb3491 92 Pfam PF08774 VRR-NUC domain 31 82 8.4E-7 T 15-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 D934_12430 0906560cda05786e344626755feb3491 92 SMART SM00990 5 85 1.8E-16 T 15-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 D934_12430 0906560cda05786e344626755feb3491 92 Gene3D G3DSA:3.40.1350.10 5 92 5.3E-29 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 D934_12430 0906560cda05786e344626755feb3491 92 Pfam PF08774 VRR-NUC domain 31 82 8.4E-7 T 15-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 D934_08870 6ec92c5861dd8f54648a2d4dbe3594e7 108 Pfam PF11112 Pyocin activator protein PrtN 13 83 2.5E-19 T 15-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 D934_09190 369825a71ad7fc3f96e1b8ba89c0f173 127 Pfam PF12472 Phage related protein 63 116 1.5E-14 T 15-10-2018 IPR021096 Vibrio phage VSK, Orf152 D934_09135 17676b80656600c17a704bf5313c4563 391 Pfam PF02486 Replication initiation factor 175 353 5.8E-32 T 15-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 D934_08015 6140ba11039f51df9ffe7b3f808b02fa 480 PIRSF PIRSF006060 15 478 1.2E-81 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D934_08015 6140ba11039f51df9ffe7b3f808b02fa 480 Gene3D G3DSA:1.20.1740.10 27 477 2.9E-109 T 15-10-2018 D934_08015 6140ba11039f51df9ffe7b3f808b02fa 480 Pfam PF13520 Amino acid permease 29 439 8.3E-53 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 D934_07990 9f3759d764717d7f6b67eac91b3c7099 145 Pfam PF04519 Polymer-forming cytoskeletal 16 115 1.9E-22 T 15-10-2018 IPR007607 Bactofilin A/B D934_02995 d1eb2af850eb32e4e01f6f378f9cfdd2 169 SUPERFAMILY SSF56672 4 167 1.22E-18 T 15-10-2018 D934_13315 d7cc2118288a12afc8c20270c261b747 261 Pfam PF01925 Sulfite exporter TauE/SafE 11 250 1.1E-44 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 D934_02240 6fd863fa2230c3bd4c5461c35edba1a7 114 Gene3D G3DSA:3.90.220.20 1 112 2.4E-7 T 15-10-2018 D934_02240 6fd863fa2230c3bd4c5461c35edba1a7 114 SUPERFAMILY SSF116734 3 105 3.27E-7 T 15-10-2018 D934_08320 96f6e49e7134137a7892e2bd4b677bd7 418 Pfam PF16074 Type IV Pilus-assembly protein W 278 413 1.9E-23 T 15-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 D934_09120 cd566ab1b6d8e594fc1a9f8ee778fbaf 88 SUPERFAMILY SSF89447 1 38 3.49E-5 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily D934_09120 cd566ab1b6d8e594fc1a9f8ee778fbaf 88 SMART SM00966 4 50 4.5E-5 T 15-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 D934_09120 cd566ab1b6d8e594fc1a9f8ee778fbaf 88 Gene3D G3DSA:2.10.260.10 2 40 1.1E-5 T 15-10-2018 D934_12115 46915d830455d6be506f3586ab6e4f3e 222 PIRSF PIRSF028583 4 222 1.8E-96 T 15-10-2018 IPR016892 Uncharacterised conserved protein UCP028583 D934_04655 2e157eb90b7cb2f4441b6d3b89791945 58 SUPERFAMILY SSF161093 1 42 1.83E-9 T 15-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 D934_04655 2e157eb90b7cb2f4441b6d3b89791945 58 Gene3D G3DSA:1.10.357.20 1 51 1.7E-9 T 15-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain D934_00750 8dc725b80cca2c55e438b990161a3ce7 253 PIRSF PIRSF009160 1 253 4.1E-102 T 15-10-2018 IPR010539 Protein of unknown function UCP009160 D934_00750 8dc725b80cca2c55e438b990161a3ce7 253 Pfam PF12811 Bax inhibitor 1 like 25 251 1.3E-79 T 15-10-2018 IPR010539 Protein of unknown function UCP009160 D934_11055 b637e8453a331ba14b6060cb4effe11f 352 Pfam PF01757 Acyltransferase family 17 326 3.1E-19 T 15-10-2018 IPR002656 Acyltransferase 3 GO:0016747 D934_12825 5813093f5af679269a44d08c212da2bf 185 SUPERFAMILY SSF48452 77 173 1.78E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_12825 5813093f5af679269a44d08c212da2bf 185 Gene3D G3DSA:1.25.40.10 47 177 1.8E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D934_10525 01b93f6a72066cc3736de263e3a62716 112 Pfam PF07238 PilZ domain 24 108 4.5E-7 T 15-10-2018 IPR009875 PilZ domain GO:0035438 D934_10525 01b93f6a72066cc3736de263e3a62716 112 Gene3D G3DSA:2.40.10.220 2 111 3.8E-7 T 15-10-2018 D934_13305 4ebf347d2b661d845905cff65916d6ba 135 Pfam PF04143 Sulphur transport 4 124 5.0E-10 T 15-10-2018 IPR007272 Sulphur transport domain D934_02230 a6beb880f698b0dc19f209d186890346 149 Pfam PF01863 Protein of unknown function DUF45 9 95 4.4E-27 T 15-10-2018 IPR002725 Protein of unknown function DUF45 D934_02230 a6beb880f698b0dc19f209d186890346 149 Gene3D G3DSA:3.30.2010.10 11 101 4.1E-15 T 15-10-2018 D934_06195 8c993e59f0fd4384b1538b793f6eecfd 426 Pfam PF10926 Protein of unknown function (DUF2800) 4 391 2.8E-114 T 15-10-2018 IPR021229 Protein of unknown function DUF2800 D934_01720 e0e5f9987ad5b57905e1123b0bb8a583 257 SUPERFAMILY SSF53774 22 132 1.57E-5 T 15-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 D934_01720 e0e5f9987ad5b57905e1123b0bb8a583 257 Pfam PF05433 Glycine zipper 2TM domain 104 144 3.5E-9 T 15-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 D934_05200 fbb90f94aa2745f217003f820f6701b9 210 SUPERFAMILY SSF46689 52 168 3.23E-5 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D934_10170 fb24b0134dd68d6ab8847faf97391f1c 319 Pfam PF06189 5'-nucleotidase 39 316 1.4E-104 T 15-10-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 D934_10845 264f267e0f32adfcc2f74d5c82f54526 148 Pfam PF04865 Baseplate J-like protein 21 108 1.2E-10 T 15-10-2018 IPR006949 Baseplate protein J-like D934_11870 39e73d01be590463129405b64b3ac4be 130 Gene3D G3DSA:1.20.1270.390 31 128 1.2E-9 T 15-10-2018 D934_11870 39e73d01be590463129405b64b3ac4be 130 Pfam PF14346 Domain of unknown function (DUF4398) 24 121 5.3E-18 T 15-10-2018 IPR025511 Domain of unknown function DUF4398 D934_00590 6c7f4a35263eb0d524cbec8f5fd0fa8e 152 Pfam PF07510 Protein of unknown function (DUF1524) 59 134 3.6E-10 T 15-10-2018 IPR011089 Domain of unknown function DUF1524 D934_03625 ad6a727f5fb2858f684a186c86bb6b4b 177 Pfam PF09900 Predicted membrane protein (DUF2127) 32 166 1.3E-34 T 15-10-2018 IPR021125 Protein of unknown function DUF2127 D934_11750 85b40b8597b595eb90f0bbaca71198df 158 PIRSF PIRSF028570 1 158 1.4E-68 T 15-10-2018 IPR016891 Protein of unknown function DUF2321 D934_11750 85b40b8597b595eb90f0bbaca71198df 158 Pfam PF10083 Uncharacterized protein conserved in bacteria (DUF2321) 4 158 6.4E-60 T 15-10-2018 IPR016891 Protein of unknown function DUF2321 D934_03010 9c7ad69cbb723f73668c2683b4a79863 138 Gene3D G3DSA:3.90.20.10 34 118 7.9E-9 T 15-10-2018 D934_13855 8eaf8b2ba70a9e41c55dda5b2a21c0ee 121 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 17 110 1.5E-20 T 15-10-2018 IPR009241 Toxin HigB-like D934_10440 0e774e7d5ee1f9e556f3a09e496bf796 210 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 77 191 7.4E-25 T 15-10-2018 IPR034756 Type II secretion system (T2SS), protein M subtype b D934_04115 66bb62d8cf8b52e23ec766d1b32b4382 188 Pfam PF01292 Prokaryotic cytochrome b561 9 180 1.4E-27 T 15-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 D934_04115 66bb62d8cf8b52e23ec766d1b32b4382 188 SUPERFAMILY SSF81342 6 180 1.1E-34 T 15-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 D934_04740 391ee8e7f8485ce6c74c5f8ec3e48265 100 SUPERFAMILY SSF47473 41 80 4.56E-5 T 15-10-2018 IPR011992 EF-hand domain pair D934_04740 391ee8e7f8485ce6c74c5f8ec3e48265 100 Gene3D G3DSA:1.10.238.10 37 72 2.5E-5 T 15-10-2018 D934_08520 a6ad56aec971ebf6c6291635822cde7c 493 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 333 483 4.4E-56 T 15-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit D934_08520 a6ad56aec971ebf6c6291635822cde7c 493 Pfam PF17289 Terminase RNaseH-like domain 321 479 6.6E-13 T 15-10-2018 IPR035421 Terminase, large subunit gp17-like D934_11625 684fa3db2589398426f4e98872a51cf9 367 SUPERFAMILY SSF103647 248 341 1.31E-6 T 15-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 D934_11955 228a182634bad3c57a9718747ba21b31 285 Pfam PF11306 Protein of unknown function (DUF3108) 50 266 4.0E-22 T 15-10-2018 IPR021457 Protein of unknown function DUF3108 D934_03985 c15178085ebc4d6538f85ee832da4459 308 Pfam PF02470 MlaD protein 40 115 2.3E-14 T 15-10-2018 IPR003399 Mce/MlaD D934_08325 d684a8c7ee6202fc3e49d17f762207b3 164 Pfam PF14341 PilX N-terminal 20 67 1.7E-7 T 15-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain D934_04760 df68bd5d28b34526f2997f1531e24455 128 Pfam PF13986 Domain of unknown function (DUF4224) 35 77 3.7E-16 T 15-10-2018 IPR025319 Domain of unknown function DUF4224 D934_01475 194a79a7e026bccdab8273f5b6fdd46b 334 Pfam PF05275 Copper resistance protein B precursor (CopB) 134 334 5.2E-65 T 15-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 D934_09260 0ce085c43e2fa8b904abe4032091fc49 123 Pfam PF10734 Protein of unknown function (DUF2523) 8 93 4.7E-12 T 15-10-2018 IPR019670 Protein of unkown function DUF2523 D934_12410 1ee19f3d329ad2c2d2866407b014f313 102 Pfam PF12323 Helix-turn-helix domain 3 30 1.3E-7 T 15-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain D934_00645 c2ad2df130be6128d068211073686faf 237 Pfam PF13835 Domain of unknown function (DUF4194) 31 200 9.4E-44 T 15-10-2018 IPR025449 Protein of unknown function DUF4194 D934_06815 1e5e0a2be45541013ca772bb22547f45 211 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 65 211 3.0E-24 T 15-10-2018 IPR018636 Protein of unknown function DUF2058 D934_06900 5c2cc72514f929a3169de6b47d85d31f 269 Pfam PF04338 Protein of unknown function, DUF481 50 268 8.4E-54 T 15-10-2018 IPR007433 Protein of unknown function DUF481 D934_10710 56b29a4db1dd81d422ff30878c5fc22d 125 Pfam PF11140 Protein of unknown function (DUF2913) 4 95 2.1E-20 T 15-10-2018 IPR021316 Protein of unknown function DUF2913 D934_09810 8f0b774c58f7e3dd40789419837e0ee7 106 Pfam PF13698 Domain of unknown function (DUF4156) 24 103 6.3E-11 T 15-10-2018 IPR025294 Protein of unknown function DUF4156 D934_06020 673e2dfd4a3149a41b266c44882a74b7 106 Pfam PF04341 Protein of unknown function, DUF485 15 101 1.6E-25 T 15-10-2018 IPR007436 Protein of unknown function DUF485 D934_03085 a57927f46b78671d389ab432961067d5 97 Pfam PF11191 Protein of unknown function (DUF2782) 42 97 5.2E-15 T 15-10-2018 IPR021357 Protein of unknown function DUF2782 D934_03085 a57927f46b78671d389ab432961067d5 97 Gene3D G3DSA:2.20.130.30 31 97 3.7E-16 T 15-10-2018 D934_13140 cd52dad7c802ac000118e72c807115e0 146 Pfam PF05258 Protein of unknown function (DUF721) 20 92 2.8E-11 T 15-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 D934_12450 6fc2f69143a2b734e00f986c9da7f496 81 Pfam PF13986 Domain of unknown function (DUF4224) 18 62 2.3E-17 T 15-10-2018 IPR025319 Domain of unknown function DUF4224 D934_11755 bac40953823c659791a4df2c37a3d2d3 131 Pfam PF10137 Predicted nucleotide-binding protein containing TIR-like domain 1 104 5.8E-31 T 15-10-2018 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain D934_12615 0d5ba122505e4743ca8148c8934ae486 201 Pfam PF06197 Protein of unknown function (DUF998) 13 194 2.9E-23 T 15-10-2018 IPR009339 Protein of unknown function DUF998 D934_05685 b17348adfbb9b84fbf5b2257c8f9d16f 1262 Pfam PF13332 Haemagluttinin repeat 290 389 6.4E-4 T 15-10-2018 IPR025157 Hemagglutinin repeat D934_05685 b17348adfbb9b84fbf5b2257c8f9d16f 1262 Pfam PF13332 Haemagluttinin repeat 441 620 9.9E-30 T 15-10-2018 IPR025157 Hemagglutinin repeat D934_05685 b17348adfbb9b84fbf5b2257c8f9d16f 1262 Pfam PF13332 Haemagluttinin repeat 207 280 1.0E-7 T 15-10-2018 IPR025157 Hemagglutinin repeat D934_01075 37c3ac13d4835e0eaaad3083b894b78d 419 Pfam PF07399 Putative Na+/H+ antiporter 6 418 5.6E-184 T 15-10-2018 IPR009978 Putative Na+/H+ antiporter D934_13265 320940d5ecab58e993ed1ef5359fbc58 326 PIRSF PIRSF028561 1 321 6.0E-169 T 15-10-2018 IPR014548 Predicted acyltransferase D934_13265 320940d5ecab58e993ed1ef5359fbc58 326 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 96 251 7.6E-5 T 15-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 D934_07040 bc215c5e99e11a1e9da5b3128a8b64ce 153 Pfam PF07603 Protein of unknown function (DUF1566) 30 138 3.6E-11 T 15-10-2018 IPR011460 Protein of unknown function DUF1566 D934_09235 a0089dadf043734084ed3320a44e3894 391 Pfam PF02486 Replication initiation factor 175 353 7.7E-32 T 15-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 D934_02875 48817c5bfefe3563cc015472dae9e3d9 220 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 187 7.3E-31 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel D934_04145 b58f527f46f206ac588b02c6e5b00b99 122 Pfam PF03235 Protein of unknown function DUF262 48 91 7.9E-10 T 15-10-2018 IPR004919 Domain of unknown function DUF262 D934_10060 3819f14fe5a82bd872fea74cb72803be 106 Gene3D G3DSA:1.10.10.2690 3 105 2.1E-32 T 15-10-2018 D934_10060 3819f14fe5a82bd872fea74cb72803be 106 Pfam PF16509 TrfB plasmid transcriptional repressor 7 92 1.9E-30 T 15-10-2018 IPR032428 TrfB transcriptional repressor protein D934_09370 5a3ff8c1f2f5b61142cbf847d9d3eb52 391 Pfam PF02486 Replication initiation factor 175 353 6.8E-32 T 15-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 D934_09125 bafcacfbc9128eb8b06dc625cacb3dde 137 Pfam PF12472 Phage related protein 63 117 5.5E-8 T 15-10-2018 IPR021096 Vibrio phage VSK, Orf152 D934_07285 16c0848c121d3e5d042da85eba5624d1 326 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 17 323 5.8E-12 T 15-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX D934_09905 28cc6363aee13ac293d7413e79e091a1 409 Pfam PF04932 O-Antigen ligase 177 332 3.6E-14 T 15-10-2018 IPR007016 O-antigen ligase-related D934_00905 c834aaeb53768efbf363315bdf5bdd2b 63 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 1 40 2.0E-15 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 D934_08230 e09692191fd223319b964c6760b98c52 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 4 59 1.4E-15 T 15-10-2018 IPR019201 Protein of unknown function DUF2065 D934_12695 e0ef2e62052bf3133bc735900ece6139 316 Pfam PF04830 Possible hemagglutinin (DUF637) 2 56 5.0E-7 T 15-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative D934_05115 fca58b8065526885456dfbf675dbc217 98 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 6 94 3.7E-24 T 15-10-2018 IPR009241 Toxin HigB-like D934_13885 ed5645fdeaeba937591f53e31d6a56c5 106 Pfam PF04956 TrbC/VIRB2 family 3 100 1.2E-13 T 15-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 D934_09915 faaefa9b60946dd2a5574351feefc8fe 186 Pfam PF11906 Protein of unknown function (DUF3426) 41 185 1.0E-33 T 15-10-2018 IPR021834 Protein of unknown function DUF3426 D934_13115 15264d3613009ce6c38d54597321b434 218 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 213 2.8E-50 T 15-10-2018 IPR018648 Protein of unknown function DUF2076 D934_07120 6caa37197edf9695009ae2a7a5c97861 690 Pfam PF16510 Phage P22-like portal protein 30 626 3.9E-71 T 15-10-2018 IPR032427 Phage P22-like portal protein D934_06415 6dc629a98a290ae95d602961e91c1cdc 95 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 19 93 6.2E-15 T 15-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative D934_06300 1138898976dc47fa62236894d5a46b10 205 SUPERFAMILY SSF46689 46 163 1.43E-5 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677