locus-tag class description LPH45_00015 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LPH45_00020 PF04221 RelB antitoxin LPH45_00095 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LPH45_00150 PF06508 Queuosine biosynthesis protein QueC LPH45_00155 PF02938 GAD domain LPH45_00155 PF00152 tRNA synthetases class II (D, K and N) LPH45_00155 PF01336 OB-fold nucleic acid binding domain LPH45_00175 PF05681 Fumarate hydratase (Fumerase) LPH45_00175 PF05683 Fumarase C-terminus LPH45_00195 PF01648 4'-phosphopantetheinyl transferase superfamily LPH45_00200 PF02527 rRNA small subunit methyltransferase G LPH45_00205 PF02779 Transketolase, pyrimidine binding domain LPH45_00205 PF02780 Transketolase, C-terminal domain LPH45_00205 PF00456 Transketolase, thiamine diphosphate binding domain LPH45_00210 PF00375 Sodium:dicarboxylate symporter family LPH45_00220 PF01625 Peptide methionine sulfoxide reductase LPH45_00235 PF01432 Peptidase family M3 LPH45_00240 PF06903 VirK protein LPH45_00245 PF02875 Mur ligase family, glutamate ligase domain LPH45_00245 PF08245 Mur ligase middle domain LPH45_00260 PF00156 Phosphoribosyl transferase domain LPH45_00270 PF00072 Response regulator receiver domain LPH45_00270 PF01339 CheB methylesterase LPH45_00275 PF01584 CheW-like domain LPH45_00275 PF02895 Signal transducing histidine kinase, homodimeric domain LPH45_00275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_00275 PF01627 Hpt domain LPH45_00275 PF00072 Response regulator receiver domain LPH45_00280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPH45_00280 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LPH45_00285 PF01584 CheW-like domain LPH45_00290 PF00072 Response regulator receiver domain LPH45_00295 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LPH45_00295 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LPH45_00310 PF05746 DALR anticodon binding domain LPH45_00310 PF02092 Glycyl-tRNA synthetase beta subunit LPH45_00315 PF02091 Glycyl-tRNA synthetase alpha subunit LPH45_00320 PF00795 Carbon-nitrogen hydrolase LPH45_00320 PF02540 NAD synthase LPH45_00345 PF03692 Putative zinc- or iron-chelating domain LPH45_00360 PF00561 alpha/beta hydrolase fold LPH45_00370 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH45_00370 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH45_00380 PF00588 SpoU rRNA Methylase family LPH45_00390 PF01808 AICARFT/IMPCHase bienzyme LPH45_00390 PF02142 MGS-like domain LPH45_00395 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LPH45_00395 PF02843 Phosphoribosylglycinamide synthetase, C domain LPH45_00395 PF02844 Phosphoribosylglycinamide synthetase, N domain LPH45_00415 PF12805 FUSC-like inner membrane protein yccS LPH45_00425 PF03186 CobD/Cbib protein LPH45_00430 PF05658 Head domain of trimeric autotransporter adhesin LPH45_00430 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH45_00430 PF03895 YadA-like membrane anchor domain LPH45_00435 PF01227 GTP cyclohydrolase I LPH45_00445 PF00132 Bacterial transferase hexapeptide (six repeats) LPH45_00450 PF00588 SpoU rRNA Methylase family LPH45_00450 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPH45_00455 PF00773 RNB domain LPH45_00455 PF17876 Cold shock domain LPH45_00455 PF08461 Ribonuclease R winged-helix domain LPH45_00455 PF08206 Ribonuclease B OB domain LPH45_00455 PF00575 S1 RNA binding domain LPH45_00465 PF00959 Phage lysozyme LPH45_00535 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH45_00540 PF07690 Major Facilitator Superfamily LPH45_00545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH45_00545 PF03466 LysR substrate binding domain LPH45_00560 PF01161 Phosphatidylethanolamine-binding protein LPH45_00565 PF00719 Inorganic pyrophosphatase LPH45_00570 PF00085 Thioredoxin LPH45_00580 PF08264 Anticodon-binding domain of tRNA LPH45_00580 PF00133 tRNA synthetases class I (I, L, M and V) LPH45_00580 PF13603 Leucyl-tRNA synthetase, Domain 2 LPH45_00595 PF01467 Cytidylyltransferase-like LPH45_00610 PF13406 Transglycosylase SLT domain LPH45_00615 PF05036 Sporulation related domain LPH45_00615 PF03330 Lytic transglycolase LPH45_00720 PF05860 haemagglutination activity domain LPH45_00720 PF15605 Bacterial toxin 28 LPH45_00720 PF04829 Pre-toxin domain with VENN motif LPH45_00720 PF13332 Hemagglutinin repeat LPH45_00750 PF04829 Pre-toxin domain with VENN motif LPH45_00750 PF13332 Hemagglutinin repeat LPH45_00750 PF05860 haemagglutination activity domain LPH45_00755 PF04829 Pre-toxin domain with VENN motif LPH45_00755 PF13018 Extended Signal Peptide of Type V secretion system LPH45_00755 PF05860 haemagglutination activity domain LPH45_00755 PF13332 Hemagglutinin repeat LPH45_00850 PF13332 Hemagglutinin repeat LPH45_00850 PF05860 haemagglutination activity domain LPH45_00850 PF15605 Bacterial toxin 28 LPH45_00850 PF04829 Pre-toxin domain with VENN motif LPH45_00850 PF15605 Bacterial toxin 28 LPH45_00850 PF05860 haemagglutination activity domain LPH45_00850 PF13332 Hemagglutinin repeat LPH45_00850 PF04829 Pre-toxin domain with VENN motif LPH45_00855 PF04829 Pre-toxin domain with VENN motif LPH45_00855 PF05860 haemagglutination activity domain LPH45_00855 PF13332 Hemagglutinin repeat LPH45_00855 PF13018 Extended Signal Peptide of Type V secretion system LPH45_00880 PF01810 LysE type translocator LPH45_00905 PF01132 Elongation factor P (EF-P) OB domain LPH45_00905 PF09285 Elongation factor P, C-terminal LPH45_00905 PF08207 Elongation factor P (EF-P) KOW-like domain LPH45_00910 PF02913 FAD linked oxidases, C-terminal domain LPH45_00910 PF01565 FAD binding domain LPH45_00915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPH45_00915 PF01842 ACT domain LPH45_00915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPH45_00920 PF13520 Amino acid permease LPH45_00925 PF13520 Amino acid permease LPH45_00930 PF00596 Class II Aldolase and Adducin N-terminal domain LPH45_00935 PF03079 ARD/ARD' family LPH45_00965 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LPH45_00965 PF01502 Phosphoribosyl-AMP cyclohydrolase LPH45_00970 PF00977 Histidine biosynthesis protein LPH45_00975 PF00977 Histidine biosynthesis protein LPH45_00980 PF00117 Glutamine amidotransferase class-I LPH45_00985 PF00475 Imidazoleglycerol-phosphate dehydratase LPH45_00990 PF00155 Aminotransferase class I and II LPH45_00995 PF00815 Histidinol dehydrogenase LPH45_01000 PF01634 ATP phosphoribosyltransferase LPH45_01000 PF08029 HisG, C-terminal domain LPH45_01015 PF03129 Anticodon binding domain LPH45_01015 PF13393 Histidyl-tRNA synthetase LPH45_01025 PF00291 Pyridoxal-phosphate dependent enzyme LPH45_01025 PF14821 Threonine synthase N terminus LPH45_01030 PF00288 GHMP kinases N terminal domain LPH45_01030 PF08544 GHMP kinases C terminal LPH45_01035 PF00696 Amino acid kinase family LPH45_01035 PF13840 ACT domain LPH45_01035 PF00742 Homoserine dehydrogenase LPH45_01035 PF03447 Homoserine dehydrogenase, NAD binding domain LPH45_01035 PF01842 ACT domain LPH45_01045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH45_01045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH45_01050 PF03652 Holliday junction resolvase LPH45_01055 PF02622 Uncharacterized ACR, COG1678 LPH45_01060 PF07943 Penicillin-binding protein 5, C-terminal domain LPH45_01060 PF00768 D-alanyl-D-alanine carboxypeptidase LPH45_01065 PF00141 Peroxidase LPH45_01070 PF00226 DnaJ domain LPH45_01070 PF01556 DnaJ C terminal domain LPH45_01080 PF06832 Penicillin-Binding Protein C-terminus Family LPH45_01080 PF00912 Transglycosylase LPH45_01080 PF00905 Penicillin binding protein transpeptidase domain LPH45_01085 PF07715 TonB-dependent Receptor Plug Domain LPH45_01085 PF00593 TonB dependent receptor LPH45_01105 PF04542 Sigma-70 region 2 LPH45_01105 PF08281 Sigma-70, region 4 LPH45_01115 PF13180 PDZ domain LPH45_01120 PF06421 GTP-binding protein LepA C-terminus LPH45_01120 PF03144 Elongation factor Tu domain 2 LPH45_01120 PF00009 Elongation factor Tu GTP binding domain LPH45_01120 PF00679 Elongation factor G C-terminus LPH45_01125 PF10502 Signal peptidase, peptidase S26 LPH45_01135 PF00035 Double-stranded RNA binding motif LPH45_01135 PF14622 Ribonuclease-III-like LPH45_01140 PF01926 50S ribosome-binding GTPase LPH45_01140 PF07650 KH domain LPH45_01145 PF11967 Recombination protein O N terminal LPH45_01145 PF02565 Recombination protein O C terminal LPH45_01150 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LPH45_01150 PF02780 Transketolase, C-terminal domain LPH45_01150 PF02779 Transketolase, pyrimidine binding domain LPH45_01160 PF00474 Sodium:solute symporter family LPH45_01170 PF16177 Acetyl-coenzyme A synthetase N-terminus LPH45_01170 PF00501 AMP-binding enzyme LPH45_01170 PF13193 AMP-binding enzyme C-terminal domain LPH45_01175 PF02659 Putative manganese efflux pump LPH45_01180 PF00106 short chain dehydrogenase LPH45_01195 PF13360 PQQ-like domain LPH45_01200 PF07676 WD40-like Beta Propeller Repeat LPH45_01200 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LPH45_01200 PF00326 Prolyl oligopeptidase family LPH45_01205 PF03169 OPT oligopeptide transporter protein LPH45_01210 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LPH45_01210 PF01266 FAD dependent oxidoreductase LPH45_01215 PF00230 Major intrinsic protein LPH45_01220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPH45_01220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPH45_01235 PF08267 Cobalamin-independent synthase, N-terminal domain LPH45_01235 PF01717 Cobalamin-independent synthase, Catalytic domain LPH45_01240 PF02677 Epoxyqueuosine reductase QueH LPH45_01250 PF00501 AMP-binding enzyme LPH45_01260 PF00535 Glycosyl transferase family 2 LPH45_01265 PF01370 NAD dependent epimerase/dehydratase family LPH45_01270 PF17762 HTH domain found in ParB protein LPH45_01270 PF02195 ParB-like nuclease domain LPH45_01275 PF13614 AAA domain LPH45_01290 PF02403 Seryl-tRNA synthetase N-terminal domain LPH45_01290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH45_01295 PF03544 Gram-negative bacterial TonB protein C-terminal LPH45_01300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH45_01305 PF01842 ACT domain LPH45_01305 PF01817 Chorismate mutase type II LPH45_01305 PF00800 Prephenate dehydratase LPH45_01310 PF00266 Aminotransferase class-V LPH45_01320 PF12679 ABC-2 family transporter protein LPH45_01325 PF00005 ABC transporter LPH45_01355 PF00440 Bacterial regulatory proteins, tetR family LPH45_01360 PF01209 ubiE/COQ5 methyltransferase family LPH45_01370 PF00294 pfkB family carbohydrate kinase LPH45_01375 PF07690 Major Facilitator Superfamily LPH45_01385 PF04102 SlyX LPH45_01390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH45_01390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH45_01390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH45_01395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH45_01395 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH45_01400 PF00255 Glutathione peroxidase LPH45_01410 PF00005 ABC transporter LPH45_01425 PF10415 Fumarase C C-terminus LPH45_01425 PF00206 Lyase LPH45_01430 PF08328 Adenylosuccinate lyase C-terminal LPH45_01430 PF00206 Lyase LPH45_01435 PF08007 Cupin superfamily protein LPH45_01440 PF16078 2-oxoglutarate dehydrogenase N-terminus LPH45_01440 PF16870 2-oxoglutarate dehydrogenase C-terminal LPH45_01440 PF02779 Transketolase, pyrimidine binding domain LPH45_01440 PF00676 Dehydrogenase E1 component LPH45_01445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH45_01445 PF02817 e3 binding domain LPH45_01445 PF00364 Biotin-requiring enzyme LPH45_01450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH45_01450 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH45_01460 PF00899 ThiF family LPH45_01475 PF00325 Bacterial regulatory proteins, crp family LPH45_01475 PF00027 Cyclic nucleotide-binding domain LPH45_01480 PF02675 S-adenosylmethionine decarboxylase LPH45_01485 PF03232 Ubiquinone biosynthesis protein COQ7 LPH45_01490 PF00572 Ribosomal protein L13 LPH45_01495 PF00380 Ribosomal protein S9/S16 LPH45_01500 PF00285 Citrate synthase, C-terminal domain LPH45_01505 PF01197 Ribosomal protein L31 LPH45_01510 PF00814 Glycoprotease family LPH45_01515 PF03466 LysR substrate binding domain LPH45_01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH45_01520 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH45_01520 PF13192 Thioredoxin domain LPH45_01525 PF00578 AhpC/TSA family LPH45_01525 PF10417 C-terminal domain of 1-Cys peroxiredoxin LPH45_01530 PF13018 Extended Signal Peptide of Type V secretion system LPH45_01530 PF03895 YadA-like membrane anchor domain LPH45_01530 PF05658 Head domain of trimeric autotransporter adhesin LPH45_01530 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH45_01535 PF00263 Bacterial type II and III secretion system protein LPH45_01535 PF03958 Bacterial type II/III secretion system short domain LPH45_01545 PF10741 Type II secretion system (T2SS), protein M subtype b LPH45_01550 PF05137 Fimbrial assembly protein (PilN) LPH45_01555 PF03934 Type II secretion system (T2SS), protein K LPH45_01565 PF03934 Type II secretion system (T2SS), protein K LPH45_01575 PF07963 Prokaryotic N-terminal methylation motif LPH45_01580 PF12019 Type II transport protein GspH LPH45_01585 PF08334 Type II secretion system (T2SS), protein G LPH45_01590 PF00482 Type II secretion system (T2SS), protein F LPH45_01595 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH45_01595 PF00437 Type II/IV secretion system protein LPH45_01615 PF17827 PrmC N-terminal domain LPH45_01615 PF05175 Methyltransferase small domain LPH45_01625 PF00561 alpha/beta hydrolase fold LPH45_01640 PF04055 Radical SAM superfamily LPH45_01640 PF06969 HemN C-terminal domain LPH45_01645 PF01725 Ham1 family LPH45_01650 PF01138 3' exoribonuclease family, domain 1 LPH45_01650 PF03725 3' exoribonuclease family, domain 2 LPH45_01655 PF03755 YicC-like family, N-terminal region LPH45_01655 PF08340 Domain of unknown function (DUF1732) LPH45_01660 PF00625 Guanylate kinase LPH45_01665 PF01192 RNA polymerase Rpb6 LPH45_01670 PF00009 Elongation factor Tu GTP binding domain LPH45_01675 PF01507 Phosphoadenosine phosphosulfate reductase family LPH45_01680 PF00175 Oxidoreductase NAD-binding domain LPH45_01680 PF00258 Flavodoxin LPH45_01680 PF00667 FAD binding domain LPH45_01685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPH45_01685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPH45_01690 PF01507 Phosphoadenosine phosphosulfate reductase family LPH45_01715 PF13369 Transglutaminase-like superfamily LPH45_01750 PF11838 ERAP1-like C-terminal domain LPH45_01750 PF01433 Peptidase family M1 domain LPH45_01755 PF01209 ubiE/COQ5 methyltransferase family LPH45_01765 PF07724 AAA domain (Cdc48 subfamily) LPH45_01765 PF10431 C-terminal, D2-small domain, of ClpB protein LPH45_01765 PF00004 ATPase family associated with various cellular activities (AAA) LPH45_01770 PF00227 Proteasome subunit LPH45_01780 PF02899 Phage integrase, N-terminal SAM-like domain LPH45_01780 PF00589 Phage integrase family LPH45_01790 PF01678 Diaminopimelate epimerase LPH45_01800 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LPH45_01800 PF00326 Prolyl oligopeptidase family LPH45_01810 PF02082 Transcriptional regulator LPH45_01815 PF01458 Uncharacterized protein family (UPF0051) LPH45_01820 PF00005 ABC transporter LPH45_01825 PF01458 Uncharacterized protein family (UPF0051) LPH45_01830 PF00266 Aminotransferase class-V LPH45_01835 PF00355 Rieske [2Fe-2S] domain LPH45_01840 PF13439 Glycosyltransferase Family 4 LPH45_01840 PF00534 Glycosyl transferases group 1 LPH45_01845 PF01522 Polysaccharide deacetylase LPH45_01850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH45_01850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH45_01850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH45_01850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH45_01855 PF01039 Carboxyl transferase domain LPH45_01855 PF17848 Acetyl-coA carboxylase zinc finger domain LPH45_01870 PF01979 Amidohydrolase family LPH45_01875 PF01380 SIS domain LPH45_01885 PF07690 Major Facilitator Superfamily LPH45_01895 PF02685 Glucokinase LPH45_01920 PF00512 His Kinase A (phospho-acceptor) domain LPH45_01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_01935 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LPH45_01940 PF00004 ATPase family associated with various cellular activities (AAA) LPH45_01940 PF16193 AAA C-terminal domain LPH45_01940 PF12002 MgsA AAA+ ATPase C terminal LPH45_01945 PF03548 Outer membrane lipoprotein carrier protein LolA LPH45_01960 PF01580 FtsK/SpoIIIE family LPH45_01960 PF09397 Ftsk gamma domain LPH45_01960 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LPH45_01960 PF17854 FtsK alpha domain LPH45_01965 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH45_01975 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LPH45_01980 PF01176 Translation initiation factor 1A / IF-1 LPH45_01985 PF00004 ATPase family associated with various cellular activities (AAA) LPH45_01985 PF07724 AAA domain (Cdc48 subfamily) LPH45_01985 PF17871 AAA lid domain LPH45_01985 PF02861 Clp amino terminal domain, pathogenicity island component LPH45_01985 PF10431 C-terminal, D2-small domain, of ClpB protein LPH45_01990 PF02617 ATP-dependent Clp protease adaptor protein ClpS LPH45_01995 PF00293 NUDIX domain LPH45_02005 PF04356 Protein of unknown function (DUF489) LPH45_02020 PF01323 DSBA-like thioredoxin domain LPH45_02030 PF01926 50S ribosome-binding GTPase LPH45_02035 PF04107 Glutamate-cysteine ligase family 2(GCS2) LPH45_02045 PF00202 Aminotransferase class-III LPH45_02050 PF00520 Ion transport protein LPH45_02050 PF00027 Cyclic nucleotide-binding domain LPH45_02055 PF02899 Phage integrase, N-terminal SAM-like domain LPH45_02055 PF00589 Phage integrase family LPH45_02060 PF13098 Thioredoxin-like domain LPH45_02060 PF10411 Disulfide bond isomerase protein N-terminus LPH45_02065 PF02769 AIR synthase related protein, C-terminal domain LPH45_02065 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LPH45_02065 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LPH45_02075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH45_02085 PF00571 CBS domain LPH45_02085 PF01380 SIS domain LPH45_02105 PF00005 ABC transporter LPH45_02105 PF12399 Branched-chain amino acid ATP-binding cassette transporter LPH45_02110 PF00309 Sigma-54 factor, Activator interacting domain (AID) LPH45_02110 PF04963 Sigma-54 factor, core binding domain LPH45_02110 PF04552 Sigma-54, DNA binding domain LPH45_02115 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LPH45_02120 PF02603 HPr Serine kinase N terminus LPH45_02120 PF07475 HPr Serine kinase C-terminal domain LPH45_02125 PF03668 P-loop ATPase protein family LPH45_02135 PF00381 PTS HPr component phosphorylation site LPH45_02140 PF05524 PEP-utilising enzyme, N-terminal LPH45_02140 PF00391 PEP-utilising enzyme, mobile domain LPH45_02140 PF02896 PEP-utilising enzyme, TIM barrel domain LPH45_02145 PF00571 CBS domain LPH45_02145 PF01769 Divalent cation transporter LPH45_02145 PF03448 MgtE intracellular N domain LPH45_02150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPH45_02190 PF04542 Sigma-70 region 2 LPH45_02190 PF08281 Sigma-70, region 4 LPH45_02200 PF00082 Subtilase family LPH45_02205 PF00436 Single-strand binding protein family LPH45_02210 PF00348 Polyprenyl synthetase LPH45_02215 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LPH45_02215 PF06481 COX Aromatic Rich Motif LPH45_02220 PF00115 Cytochrome C and Quinol oxidase polypeptide I LPH45_02225 PF00510 Cytochrome c oxidase subunit III LPH45_02230 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LPH45_02235 PF02347 Glycine cleavage system P-protein LPH45_02245 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LPH45_02245 PF00271 Helicase conserved C-terminal domain LPH45_02245 PF04408 Helicase associated domain (HA2) LPH45_02245 PF11898 Domain of unknown function (DUF3418) LPH45_02245 PF00270 DEAD/DEAH box helicase LPH45_02250 PF00210 Ferritin-like domain LPH45_02255 PF16124 RecQ zinc-binding LPH45_02255 PF00570 HRDC domain LPH45_02255 PF00271 Helicase conserved C-terminal domain LPH45_02255 PF00270 DEAD/DEAH box helicase LPH45_02255 PF09382 RQC domain LPH45_02275 PF00296 Luciferase-like monooxygenase LPH45_02280 PF18073 Rubredoxin metal binding domain LPH45_02295 PF00290 Tryptophan synthase alpha chain LPH45_02300 PF00291 Pyridoxal-phosphate dependent enzyme LPH45_02305 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPH45_02310 PF01416 tRNA pseudouridine synthase LPH45_02320 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH45_02320 PF02774 Semialdehyde dehydrogenase, dimerisation domain LPH45_02330 PF01264 Chorismate synthase LPH45_02335 PF05175 Methyltransferase small domain LPH45_02350 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH45_02350 PF06594 Haemolysin-type calcium binding protein related domain LPH45_02405 PF00348 Polyprenyl synthetase LPH45_02410 PF02609 Exonuclease VII small subunit LPH45_02415 PF01171 PP-loop family LPH45_02415 PF11734 TilS substrate C-terminal domain LPH45_02415 PF09179 TilS substrate binding domain LPH45_02425 PF00375 Sodium:dicarboxylate symporter family LPH45_02430 PF00877 NlpC/P60 family LPH45_02435 PF00877 NlpC/P60 family LPH45_02440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH45_02445 PF04235 Protein of unknown function (DUF418) LPH45_02470 PF10576 Iron-sulfur binding domain of endonuclease III LPH45_02470 PF00633 Helix-hairpin-helix motif LPH45_02470 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH45_02485 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH45_02485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH45_02490 PF00293 NUDIX domain LPH45_02520 PF01488 Shikimate / quinate 5-dehydrogenase LPH45_02520 PF08501 Shikimate dehydrogenase substrate binding domain LPH45_02520 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LPH45_02525 PF02581 Thiamine monophosphate synthase LPH45_02525 PF08543 Phosphomethylpyrimidine kinase LPH45_02540 PF02683 Cytochrome C biogenesis protein transmembrane region LPH45_02540 PF11412 Disulphide bond corrector protein DsbC LPH45_02545 PF03091 CutA1 divalent ion tolerance protein LPH45_02550 PF00166 Chaperonin 10 Kd subunit LPH45_02555 PF00118 TCP-1/cpn60 chaperonin family LPH45_02580 PF01370 NAD dependent epimerase/dehydratase family LPH45_02585 PF01370 NAD dependent epimerase/dehydratase family LPH45_02590 PF16363 GDP-mannose 4,6 dehydratase LPH45_02605 PF00291 Pyridoxal-phosphate dependent enzyme LPH45_02625 PF00593 TonB dependent receptor LPH45_02625 PF07715 TonB-dependent Receptor Plug Domain LPH45_02630 PF13640 2OG-Fe(II) oxygenase superfamily LPH45_02630 PF18331 PKHD-type hydroxylase C-terminal domain LPH45_02650 PF02424 ApbE family LPH45_02655 PF00667 FAD binding domain LPH45_02655 PF00175 Oxidoreductase NAD-binding domain LPH45_02655 PF00258 Flavodoxin LPH45_02665 PF01636 Phosphotransferase enzyme family LPH45_02670 PF00483 Nucleotidyl transferase LPH45_02675 PF00308 Bacterial dnaA protein LPH45_02680 PF01594 AI-2E family transporter LPH45_02690 PF02769 AIR synthase related protein, C-terminal domain LPH45_02690 PF00586 AIR synthase related protein, N-terminal domain LPH45_02695 PF00551 Formyl transferase LPH45_02710 PF02223 Thymidylate kinase LPH45_02715 PF05649 Peptidase family M13 LPH45_02715 PF01431 Peptidase family M13 LPH45_02720 PF07977 FabA-like domain LPH45_02725 PF01171 PP-loop family LPH45_02730 PF04381 Putative exonuclease, RdgC LPH45_02740 PF00762 Ferrochelatase LPH45_02750 PF02416 mttA/Hcf106 family LPH45_02755 PF02416 mttA/Hcf106 family LPH45_02760 PF00902 Sec-independent protein translocase protein (TatC) LPH45_02770 PF00117 Glutamine amidotransferase class-I LPH45_02770 PF02540 NAD synthase LPH45_02770 PF00958 GMP synthase C terminal domain LPH45_02775 PF00127 Copper binding proteins, plastocyanin/azurin family LPH45_02780 PF03193 RsgA GTPase LPH45_02785 PF02021 Uncharacterised protein family UPF0102 LPH45_02790 PF04348 LppC putative lipoprotein LPH45_02795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH45_02800 PF00593 TonB dependent receptor LPH45_02800 PF07715 TonB-dependent Receptor Plug Domain LPH45_02805 PF01588 Putative tRNA binding domain LPH45_02805 PF09334 tRNA synthetases class I (M) LPH45_02815 PF04060 Putative Fe-S cluster LPH45_02860 PF01546 Peptidase family M20/M25/M40 LPH45_02860 PF07687 Peptidase dimerisation domain LPH45_02885 PF05567 Neisseria PilC beta-propeller domain LPH45_02910 PF03641 Possible lysine decarboxylase LPH45_02910 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LPH45_02910 PF11892 Domain of unknown function (DUF3412) LPH45_02920 PF00563 EAL domain LPH45_02920 PF12792 CSS motif domain associated with EAL LPH45_02930 PF00899 ThiF family LPH45_02935 PF01926 50S ribosome-binding GTPase LPH45_02935 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LPH45_02940 PF13360 PQQ-like domain LPH45_02940 PF01011 PQQ enzyme repeat LPH45_02960 PF04055 Radical SAM superfamily LPH45_02965 PF00334 Nucleoside diphosphate kinase LPH45_02970 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LPH45_02970 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LPH45_02975 PF00709 Adenylosuccinate synthetase LPH45_02985 PF01145 SPFH domain / Band 7 family LPH45_02990 PF01145 SPFH domain / Band 7 family LPH45_02990 PF12221 Bacterial membrane protein N terminal LPH45_02995 PF00107 Zinc-binding dehydrogenase LPH45_02995 PF08240 Alcohol dehydrogenase GroES-like domain LPH45_03000 PF00072 Response regulator receiver domain LPH45_03015 PF03129 Anticodon binding domain LPH45_03015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH45_03015 PF04073 Aminoacyl-tRNA editing domain LPH45_03025 PF01066 CDP-alcohol phosphatidyltransferase LPH45_03035 PF00583 Acetyltransferase (GNAT) family LPH45_03050 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH45_03050 PF14310 Fibronectin type III-like domain LPH45_03050 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH45_03055 PF00924 Mechanosensitive ion channel LPH45_03060 PF02152 Dihydroneopterin aldolase LPH45_03065 PF00814 Glycoprotease family LPH45_03070 PF01165 Ribosomal protein S21 LPH45_03075 PF09424 Yqey-like protein LPH45_03080 PF03631 Virulence factor BrkB LPH45_03085 PF01807 CHC2 zinc finger LPH45_03085 PF08278 DNA primase DnaG DnaB-binding LPH45_03085 PF10410 DnaB-helicase binding domain of primase LPH45_03085 PF08275 DNA primase catalytic core, N-terminal domain LPH45_03095 PF00579 tRNA synthetases class I (W and Y) LPH45_03100 PF13538 UvrD-like helicase C-terminal domain LPH45_03105 PF12705 PD-(D/E)XK nuclease superfamily LPH45_03105 PF00580 UvrD/REP helicase N-terminal domain LPH45_03105 PF13361 UvrD-like helicase C-terminal domain LPH45_03110 PF17946 RecC C-terminal domain LPH45_03115 PF00005 ABC transporter LPH45_03120 PF02405 Permease MlaE LPH45_03125 PF02470 MlaD protein LPH45_03130 PF05494 MlaC protein LPH45_03140 PF04333 MlaA lipoprotein LPH45_03145 PF02646 RmuC family LPH45_03150 PF00005 ABC transporter LPH45_03165 PF13520 Amino acid permease LPH45_03175 PF17785 PUA-like domain LPH45_03175 PF10672 S-adenosylmethionine-dependent methyltransferase LPH45_03180 PF03741 Integral membrane protein TerC family LPH45_03195 PF01521 Iron-sulphur cluster biosynthesis LPH45_03210 PF00486 Transcriptional regulatory protein, C terminal LPH45_03210 PF00072 Response regulator receiver domain LPH45_03215 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH45_03215 PF01627 Hpt domain LPH45_03215 PF00072 Response regulator receiver domain LPH45_03215 PF00512 His Kinase A (phospho-acceptor) domain LPH45_03215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_03215 PF00672 HAMP domain LPH45_03220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH45_03220 PF00072 Response regulator receiver domain LPH45_03220 PF01627 Hpt domain LPH45_03220 PF00512 His Kinase A (phospho-acceptor) domain LPH45_03220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_03220 PF00672 HAMP domain LPH45_03225 PF00210 Ferritin-like domain LPH45_03250 PF02772 S-adenosylmethionine synthetase, central domain LPH45_03250 PF00438 S-adenosylmethionine synthetase, N-terminal domain LPH45_03250 PF02773 S-adenosylmethionine synthetase, C-terminal domain LPH45_03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_03265 PF00486 Transcriptional regulatory protein, C terminal LPH45_03265 PF00072 Response regulator receiver domain LPH45_03275 PF01207 Dihydrouridine synthase (Dus) LPH45_03280 PF00593 TonB dependent receptor LPH45_03280 PF07715 TonB-dependent Receptor Plug Domain LPH45_03295 PF00004 ATPase family associated with various cellular activities (AAA) LPH45_03295 PF07724 AAA domain (Cdc48 subfamily) LPH45_03295 PF17871 AAA lid domain LPH45_03295 PF10431 C-terminal, D2-small domain, of ClpB protein LPH45_03295 PF02861 Clp amino terminal domain, pathogenicity island component LPH45_03305 PF00301 Rubredoxin LPH45_03310 PF02581 Thiamine monophosphate synthase LPH45_03320 PF00067 Cytochrome P450 LPH45_03350 PF03796 DnaB-like helicase C terminal domain LPH45_03350 PF00772 DnaB-like helicase N terminal domain LPH45_03355 PF05736 OprF membrane domain LPH45_03355 PF00691 OmpA family LPH45_03365 PF00248 Aldo/keto reductase family LPH45_03370 PF00912 Transglycosylase LPH45_03370 PF17092 Penicillin-binding protein OB-like domain LPH45_03370 PF00905 Penicillin binding protein transpeptidase domain LPH45_03375 PF11104 Type IV pilus assembly protein PilM; LPH45_03380 PF05137 Fimbrial assembly protein (PilN) LPH45_03385 PF04350 Pilus assembly protein, PilO LPH45_03390 PF04351 Pilus assembly protein, PilP LPH45_03395 PF11741 AMIN domain LPH45_03395 PF03958 Bacterial type II/III secretion system short domain LPH45_03395 PF07660 Secretin and TonB N terminus short domain LPH45_03395 PF00263 Bacterial type II and III secretion system protein LPH45_03405 PF08019 Phosphoethanolamine transferase EptA/EptB LPH45_03405 PF00884 Sulfatase LPH45_03410 PF00067 Cytochrome P450 LPH45_03415 PF00270 DEAD/DEAH box helicase LPH45_03415 PF00271 Helicase conserved C-terminal domain LPH45_03415 PF17191 RecG wedge domain LPH45_03420 PF01042 Endoribonuclease L-PSP LPH45_03425 PF13291 ACT domain LPH45_03425 PF04607 Region found in RelA / SpoT proteins LPH45_03425 PF02824 TGS domain LPH45_03435 PF01565 FAD binding domain LPH45_03435 PF02913 FAD linked oxidases, C-terminal domain LPH45_03440 PF00691 OmpA family LPH45_03440 PF05736 OprF membrane domain LPH45_03445 PF02600 Disulfide bond formation protein DsbB LPH45_03450 PF07715 TonB-dependent Receptor Plug Domain LPH45_03450 PF00593 TonB dependent receptor LPH45_03455 PF02590 Predicted SPOUT methyltransferase LPH45_03470 PF12344 Ultra-violet resistance protein B LPH45_03470 PF00271 Helicase conserved C-terminal domain LPH45_03470 PF17757 UvrB interaction domain LPH45_03470 PF04851 Type III restriction enzyme, res subunit LPH45_03470 PF02151 UvrB/uvrC motif LPH45_03485 PF00701 Dihydrodipicolinate synthetase family LPH45_03495 PF00578 AhpC/TSA family LPH45_03500 PF13638 PIN domain LPH45_03500 PF02562 PhoH-like protein LPH45_03520 PF02769 AIR synthase related protein, C-terminal domain LPH45_03520 PF00586 AIR synthase related protein, N-terminal domain LPH45_03525 PF01029 NusB family LPH45_03530 PF00885 6,7-dimethyl-8-ribityllumazine synthase LPH45_03535 PF00925 GTP cyclohydrolase II LPH45_03535 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LPH45_03540 PF00677 Lumazine binding domain LPH45_03545 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LPH45_03545 PF01872 RibD C-terminal domain LPH45_03555 PF03477 ATP cone domain LPH45_03565 PF00464 Serine hydroxymethyltransferase LPH45_03570 PF12848 ABC transporter LPH45_03570 PF00005 ABC transporter LPH45_03575 PF06039 Malate:quinone oxidoreductase (Mqo) LPH45_03580 PF04134 Protein of unknown function, DUF393 LPH45_03585 PF02578 Multi-copper polyphenol oxidoreductase laccase LPH45_03590 PF00849 RNA pseudouridylate synthase LPH45_03590 PF01479 S4 domain LPH45_03595 PF13525 Outer membrane lipoprotein LPH45_03605 PF02421 Ferrous iron transport protein B LPH45_03605 PF07670 Nucleoside recognition LPH45_03605 PF07664 Ferrous iron transport protein B C terminus LPH45_03620 PF04386 Stringent starvation protein B LPH45_03625 PF00043 Glutathione S-transferase, C-terminal domain LPH45_03625 PF02798 Glutathione S-transferase, N-terminal domain LPH45_03645 PF01464 Transglycosylase SLT domain LPH45_03650 PF00919 Uncharacterized protein family UPF0004 LPH45_03650 PF04055 Radical SAM superfamily LPH45_03650 PF01938 TRAM domain LPH45_03655 PF02562 PhoH-like protein LPH45_03660 PF02130 Uncharacterized protein family UPF0054 LPH45_03670 PF03471 Transporter associated domain LPH45_03670 PF00571 CBS domain LPH45_03700 PF04829 Pre-toxin domain with VENN motif LPH45_03700 PF05860 haemagglutination activity domain LPH45_03700 PF13332 Hemagglutinin repeat LPH45_03705 PF04829 Pre-toxin domain with VENN motif LPH45_03705 PF05860 haemagglutination activity domain LPH45_03705 PF13332 Hemagglutinin repeat LPH45_03705 PF13018 Extended Signal Peptide of Type V secretion system LPH45_03710 PF08479 POTRA domain, ShlB-type LPH45_03710 PF17287 POTRA domain LPH45_03710 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LPH45_03720 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH45_03720 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH45_03725 PF01008 Initiation factor 2 subunit family LPH45_03735 PF00152 tRNA synthetases class II (D, K and N) LPH45_03740 PF00583 Acetyltransferase (GNAT) family LPH45_03745 PF12826 Helix-hairpin-helix motif LPH45_03745 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LPH45_03745 PF00533 BRCA1 C Terminus (BRCT) domain LPH45_03745 PF01653 NAD-dependent DNA ligase adenylation domain LPH45_03745 PF03120 NAD-dependent DNA ligase OB-fold domain LPH45_03755 PF04354 ZipA, C-terminal FtsZ-binding domain LPH45_03760 PF02463 RecF/RecN/SMC N terminal domain LPH45_03765 PF01281 Ribosomal protein L9, N-terminal domain LPH45_03765 PF03948 Ribosomal protein L9, C-terminal domain LPH45_03770 PF01084 Ribosomal protein S18 LPH45_03775 PF01250 Ribosomal protein S6 LPH45_03780 PF01521 Iron-sulphur cluster biosynthesis LPH45_03785 PF01336 OB-fold nucleic acid binding domain LPH45_03785 PF00152 tRNA synthetases class II (D, K and N) LPH45_03790 PF01061 ABC-2 type transporter LPH45_03795 PF00005 ABC transporter LPH45_03805 PF01180 Dihydroorotate dehydrogenase LPH45_03810 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LPH45_03810 PF01565 FAD binding domain LPH45_03815 PF00892 EamA-like transporter family LPH45_03820 PF01569 PAP2 superfamily LPH45_03825 PF04551 GcpE protein LPH45_03835 PF00072 Response regulator receiver domain LPH45_03840 PF00889 Elongation factor TS LPH45_03845 PF00318 Ribosomal protein S2 LPH45_03860 PF00005 ABC transporter LPH45_03860 PF00664 ABC transporter transmembrane region LPH45_03880 PF02321 Outer membrane efflux protein LPH45_03885 PF12850 Calcineurin-like phosphoesterase superfamily domain LPH45_03890 PF02541 Ppx/GppA phosphatase family LPH45_03895 PF13089 Polyphosphate kinase N-terminal domain LPH45_03895 PF17941 Polyphosphate kinase C-terminal domain 1 LPH45_03895 PF13090 Polyphosphate kinase C-terminal domain 2 LPH45_03895 PF02503 Polyphosphate kinase middle domain LPH45_03900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_03900 PF00512 His Kinase A (phospho-acceptor) domain LPH45_03900 PF11808 Phosphate regulon sensor protein PhoR LPH45_03900 PF00989 PAS fold LPH45_03905 PF00072 Response regulator receiver domain LPH45_03905 PF00486 Transcriptional regulatory protein, C terminal LPH45_03910 PF13181 Tetratricopeptide repeat LPH45_03910 PF01435 Peptidase family M48 LPH45_03915 PF00462 Glutaredoxin LPH45_03920 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH45_03930 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LPH45_03930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPH45_03940 PF11953 Domain of unknown function (DUF3470) LPH45_03940 PF00037 4Fe-4S binding domain LPH45_03950 PF01106 NifU-like domain LPH45_03955 PF01329 Pterin 4 alpha carbinolamine dehydratase LPH45_03970 PF01479 S4 domain LPH45_03970 PF00849 RNA pseudouridylate synthase LPH45_03975 PF12111 Polyribonucleotide phosphorylase C terminal LPH45_03975 PF00575 S1 RNA binding domain LPH45_03975 PF10150 Ribonuclease E/G family LPH45_03980 PF00072 Response regulator receiver domain LPH45_03980 PF00196 Bacterial regulatory proteins, luxR family LPH45_03985 PF17773 UPF0176 acylphosphatase like domain LPH45_03995 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH45_03995 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH45_04000 PF00545 ribonuclease LPH45_04010 PF12848 ABC transporter LPH45_04010 PF16326 ABC transporter C-terminal domain LPH45_04010 PF00005 ABC transporter LPH45_04015 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LPH45_04020 PF00313 'Cold-shock' DNA-binding domain LPH45_04030 PF01435 Peptidase family M48 LPH45_04035 PF03143 Elongation factor Tu C-terminal domain LPH45_04035 PF03144 Elongation factor Tu domain 2 LPH45_04035 PF00009 Elongation factor Tu GTP binding domain LPH45_04040 PF03144 Elongation factor Tu domain 2 LPH45_04040 PF00009 Elongation factor Tu GTP binding domain LPH45_04040 PF03764 Elongation factor G, domain IV LPH45_04040 PF14492 Elongation Factor G, domain II LPH45_04040 PF00679 Elongation factor G C-terminus LPH45_04045 PF00177 Ribosomal protein S7p/S5e LPH45_04050 PF00164 Ribosomal protein S12/S23 LPH45_04055 PF04983 RNA polymerase Rpb1, domain 3 LPH45_04055 PF05000 RNA polymerase Rpb1, domain 4 LPH45_04055 PF04998 RNA polymerase Rpb1, domain 5 LPH45_04055 PF00623 RNA polymerase Rpb1, domain 2 LPH45_04055 PF04997 RNA polymerase Rpb1, domain 1 LPH45_04060 PF04563 RNA polymerase beta subunit LPH45_04060 PF04560 RNA polymerase Rpb2, domain 7 LPH45_04060 PF00562 RNA polymerase Rpb2, domain 6 LPH45_04060 PF10385 RNA polymerase beta subunit external 1 domain LPH45_04060 PF04561 RNA polymerase Rpb2, domain 2 LPH45_04060 PF04565 RNA polymerase Rpb2, domain 3 LPH45_04065 PF16320 Ribosomal protein L7/L12 dimerisation domain LPH45_04065 PF00542 Ribosomal protein L7/L12 C-terminal domain LPH45_04070 PF00466 Ribosomal protein L10 LPH45_04075 PF00687 Ribosomal protein L1p/L10e family LPH45_04080 PF03946 Ribosomal protein L11, N-terminal domain LPH45_04080 PF00298 Ribosomal protein L11, RNA binding domain LPH45_04085 PF02357 Transcription termination factor nusG LPH45_04085 PF00467 KOW motif LPH45_04090 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LPH45_04100 PF03144 Elongation factor Tu domain 2 LPH45_04100 PF00009 Elongation factor Tu GTP binding domain LPH45_04100 PF03143 Elongation factor Tu C-terminal domain LPH45_04120 PF01926 50S ribosome-binding GTPase LPH45_04120 PF06071 Protein of unknown function (DUF933) LPH45_04125 PF01195 Peptidyl-tRNA hydrolase LPH45_04130 PF14693 Ribosomal protein TL5, C-terminal domain LPH45_04130 PF01386 Ribosomal L25p family LPH45_04135 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LPH45_04135 PF14572 Phosphoribosyl synthetase-associated domain LPH45_04145 PF00288 GHMP kinases N terminal domain LPH45_04145 PF08544 GHMP kinases C terminal LPH45_04150 PF03550 Outer membrane lipoprotein LolB LPH45_04160 PF01488 Shikimate / quinate 5-dehydrogenase LPH45_04160 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LPH45_04160 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LPH45_04165 PF00472 RF-1 domain LPH45_04165 PF03462 PCRF domain LPH45_04175 PF10672 S-adenosylmethionine-dependent methyltransferase LPH45_04175 PF01170 Putative RNA methylase family UPF0020 LPH45_04175 PF02926 THUMP domain LPH45_04235 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPH45_04240 PF00528 Binding-protein-dependent transport system inner membrane component LPH45_04245 PF00005 ABC transporter LPH45_04250 PF00528 Binding-protein-dependent transport system inner membrane component LPH45_04255 PF12705 PD-(D/E)XK nuclease superfamily LPH45_04255 PF00580 UvrD/REP helicase N-terminal domain LPH45_04255 PF13361 UvrD-like helicase C-terminal domain LPH45_04265 PF01914 MarC family integral membrane protein LPH45_04270 PF00462 Glutaredoxin LPH45_04275 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LPH45_04275 PF02222 ATP-grasp domain LPH45_04280 PF00731 AIR carboxylase LPH45_04300 PF07731 Multicopper oxidase LPH45_04300 PF07732 Multicopper oxidase LPH45_04310 PF00580 UvrD/REP helicase N-terminal domain LPH45_04310 PF13361 UvrD-like helicase C-terminal domain LPH45_04320 PF04349 Periplasmic glucan biosynthesis protein, MdoG LPH45_04325 PF01343 Peptidase family S49 LPH45_04330 PF01554 MatE LPH45_04345 PF00270 DEAD/DEAH box helicase LPH45_04345 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LPH45_04345 PF18074 Primosomal protein N C-terminal domain LPH45_04345 PF17764 3′ DNA-binding domain (3′BD) LPH45_04345 PF00271 Helicase conserved C-terminal domain LPH45_04350 PF04545 Sigma-70, region 4 LPH45_04350 PF04542 Sigma-70 region 2 LPH45_04350 PF00140 Sigma-70 factor, region 1.2 LPH45_04355 PF03167 Uracil DNA glycosylase superfamily LPH45_04360 PF00072 Response regulator receiver domain LPH45_04360 PF01339 CheB methylesterase LPH45_04365 PF18075 FtsX extracellular domain LPH45_04370 PF00005 ABC transporter LPH45_04375 PF12300 ATP-dependent RNA helicase RhlB LPH45_04375 PF00271 Helicase conserved C-terminal domain LPH45_04375 PF00270 DEAD/DEAH box helicase LPH45_04380 PF00085 Thioredoxin LPH45_04385 PF07498 Rho termination factor, N-terminal domain LPH45_04385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH45_04385 PF07497 Rho termination factor, RNA-binding domain LPH45_04390 PF03971 Monomeric isocitrate dehydrogenase LPH45_04395 PF09704 CRISPR-associated protein (Cas_Cas5) LPH45_04410 PF13180 PDZ domain LPH45_04410 PF03572 Peptidase family S41 LPH45_04415 PF01551 Peptidase family M23 LPH45_04425 PF00150 Cellulase (glycosyl hydrolase family 5) LPH45_04445 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH45_04445 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LPH45_04450 PF01645 Conserved region in glutamate synthase LPH45_04450 PF04898 Glutamate synthase central domain LPH45_04450 PF00310 Glutamine amidotransferases class-II LPH45_04450 PF01493 GXGXG motif LPH45_04460 PF14748 Pyrroline-5-carboxylate reductase dimerisation LPH45_04460 PF03807 NADP oxidoreductase coenzyme F420-dependent LPH45_04545 PF13332 Hemagglutinin repeat LPH45_04545 PF04829 Pre-toxin domain with VENN motif LPH45_04545 PF05860 haemagglutination activity domain LPH45_04550 PF13018 Extended Signal Peptide of Type V secretion system LPH45_04550 PF13332 Hemagglutinin repeat LPH45_04550 PF05860 haemagglutination activity domain LPH45_04550 PF04829 Pre-toxin domain with VENN motif LPH45_04590 PF18766 SWI2/SNF2 ATPase LPH45_04590 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH45_04590 PF12008 Type I restriction and modification enzyme - subunit R C terminal LPH45_04595 PF01420 Type I restriction modification DNA specificity domain LPH45_04605 PF02384 N-6 DNA Methylase LPH45_04605 PF12161 HsdM N-terminal domain LPH45_04685 PF18766 SWI2/SNF2 ATPase LPH45_04685 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH45_04685 PF11867 Domain of unknown function (DUF3387) LPH45_04690 PF01420 Type I restriction modification DNA specificity domain LPH45_04695 PF02384 N-6 DNA Methylase LPH45_04700 PF02384 N-6 DNA Methylase LPH45_04815 PF01638 HxlR-like helix-turn-helix LPH45_04820 PF00106 short chain dehydrogenase LPH45_04840 PF00912 Transglycosylase LPH45_04840 PF00905 Penicillin binding protein transpeptidase domain LPH45_04840 PF14814 Bifunctional transglycosylase second domain LPH45_04850 PF13307 Helicase C-terminal domain LPH45_04850 PF04851 Type III restriction enzyme, res subunit LPH45_04860 PF00484 Carbonic anhydrase LPH45_04865 PF00534 Glycosyl transferases group 1 LPH45_04870 PF01522 Polysaccharide deacetylase LPH45_04880 PF09383 NIL domain LPH45_04880 PF00005 ABC transporter LPH45_04885 PF00528 Binding-protein-dependent transport system inner membrane component LPH45_04890 PF03180 NLPA lipoprotein LPH45_04905 PF02817 e3 binding domain LPH45_04905 PF00364 Biotin-requiring enzyme LPH45_04905 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH45_04910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH45_04910 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH45_04920 PF01545 Cation efflux family LPH45_04925 PF01053 Cys/Met metabolism PLP-dependent enzyme LPH45_04930 PF00561 alpha/beta hydrolase fold LPH45_04935 PF01551 Peptidase family M23 LPH45_04940 PF01975 Survival protein SurE LPH45_04955 PF01476 LysM domain LPH45_04955 PF01551 Peptidase family M23 LPH45_04970 PF00842 Alanine racemase, C-terminal domain LPH45_04970 PF01168 Alanine racemase, N-terminal domain LPH45_04975 PF01266 FAD dependent oxidoreductase LPH45_04985 PF01641 SelR domain LPH45_04995 PF00728 Glycosyl hydrolase family 20, catalytic domain LPH45_04995 PF02838 Glycosyl hydrolase family 20, domain 2 LPH45_04995 PF07691 PA14 domain LPH45_05005 PF07691 PA14 domain LPH45_05005 PF14310 Fibronectin type III-like domain LPH45_05005 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH45_05005 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH45_05020 PF07971 Glycosyl hydrolase family 92 LPH45_05020 PF17678 Glycosyl hydrolase family 92 N-terminal domain LPH45_05025 PF01301 Glycosyl hydrolases family 35 LPH45_05030 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LPH45_05035 PF00639 PPIC-type PPIASE domain LPH45_05035 PF09312 SurA N-terminal domain LPH45_05040 PF04453 LPS transport system D LPH45_05050 PF01494 FAD binding domain LPH45_05055 PF01494 FAD binding domain LPH45_05060 PF06719 AraC-type transcriptional regulator N-terminus LPH45_05060 PF12833 Helix-turn-helix domain LPH45_05065 PF02525 Flavodoxin-like fold LPH45_05075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH45_05075 PF03466 LysR substrate binding domain LPH45_05080 PF10414 Sirohaem synthase dimerisation region LPH45_05080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH45_05080 PF14824 Sirohaem biosynthesis protein central LPH45_05085 PF00291 Pyridoxal-phosphate dependent enzyme LPH45_05095 PF00274 Fructose-bisphosphate aldolase class-I LPH45_05110 PF02887 Pyruvate kinase, alpha/beta domain LPH45_05110 PF00224 Pyruvate kinase, barrel domain LPH45_05115 PF00162 Phosphoglycerate kinase LPH45_05130 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH45_05135 PF01475 Ferric uptake regulator family LPH45_05150 PF00150 Cellulase (glycosyl hydrolase family 5) LPH45_05150 PF00553 Cellulose binding domain LPH45_05160 PF05193 Peptidase M16 inactive domain LPH45_05160 PF00675 Insulinase (Peptidase family M16) LPH45_05175 PF03330 Lytic transglycolase LPH45_05180 PF07516 SecA Wing and Scaffold domain LPH45_05180 PF01043 SecA preprotein cross-linking domain LPH45_05180 PF07517 SecA DEAD-like domain LPH45_05180 PF02810 SEC-C motif LPH45_05185 PF01551 Peptidase family M23 LPH45_05185 PF08525 Opacity-associated protein A N-terminal motif LPH45_05185 PF01476 LysM domain LPH45_05195 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LPH45_05200 PF00091 Tubulin/FtsZ family, GTPase domain LPH45_05200 PF12327 FtsZ family, C-terminal domain LPH45_05205 PF02491 SHS2 domain inserted in FTSA LPH45_05210 PF08478 POTRA domain, FtsQ-type LPH45_05210 PF03799 Cell division protein FtsQ LPH45_05215 PF07478 D-ala D-ala ligase C-terminus LPH45_05220 PF08245 Mur ligase middle domain LPH45_05220 PF02875 Mur ligase family, glutamate ligase domain LPH45_05220 PF01225 Mur ligase family, catalytic domain LPH45_05225 PF03033 Glycosyltransferase family 28 N-terminal domain LPH45_05225 PF04101 Glycosyltransferase family 28 C-terminal domain LPH45_05230 PF01098 Cell cycle protein LPH45_05235 PF00953 Glycosyl transferase family 4 LPH45_05240 PF02875 Mur ligase family, glutamate ligase domain LPH45_05240 PF08245 Mur ligase middle domain LPH45_05240 PF01225 Mur ligase family, catalytic domain LPH45_05245 PF01225 Mur ligase family, catalytic domain LPH45_05245 PF02875 Mur ligase family, glutamate ligase domain LPH45_05245 PF08245 Mur ligase middle domain LPH45_05250 PF00905 Penicillin binding protein transpeptidase domain LPH45_05250 PF03717 Penicillin-binding Protein dimerisation domain LPH45_05255 PF04999 Cell division protein FtsL LPH45_05260 PF01795 MraW methylase family LPH45_05265 PF02381 MraZ protein, putative antitoxin-like LPH45_05270 PF02080 TrkA-C domain LPH45_05270 PF03600 Citrate transporter LPH45_05275 PF02390 Putative methyltransferase LPH45_05280 PF05690 Thiazole biosynthesis protein ThiG LPH45_05290 PF00657 GDSL-like Lipase/Acylhydrolase LPH45_05290 PF03797 Autotransporter beta-domain LPH45_05320 PF07977 FabA-like domain LPH45_05345 PF00692 dUTPase LPH45_05355 PF08676 MutL C terminal dimerisation domain LPH45_05355 PF01119 DNA mismatch repair protein, C-terminal domain LPH45_05360 PF01520 N-acetylmuramoyl-L-alanine amidase LPH45_05360 PF11741 AMIN domain LPH45_05365 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPH45_05370 PF01256 Carbohydrate kinase LPH45_05370 PF03853 YjeF-related protein N-terminus LPH45_05375 PF13742 OB-fold nucleic acid binding domain LPH45_05375 PF02601 Exonuclease VII, large subunit LPH45_05390 PF00570 HRDC domain LPH45_05390 PF01612 3'-5' exonuclease LPH45_05420 PF00216 Bacterial DNA-binding protein LPH45_05425 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LPH45_05425 PF01588 Putative tRNA binding domain LPH45_05425 PF03147 Ferredoxin-fold anticodon binding domain LPH45_05425 PF03484 tRNA synthetase B5 domain LPH45_05425 PF03483 B3/4 domain LPH45_05430 PF01409 tRNA synthetases class II core domain (F) LPH45_05430 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LPH45_05435 PF00453 Ribosomal protein L20 LPH45_05440 PF01632 Ribosomal protein L35 LPH45_05445 PF05198 Translation initiation factor IF-3, N-terminal domain LPH45_05445 PF00707 Translation initiation factor IF-3, C-terminal domain LPH45_05450 PF03129 Anticodon binding domain LPH45_05450 PF02824 TGS domain LPH45_05450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH45_05450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH45_05460 PF18030 RimK PreATP-grasp domain LPH45_05460 PF08443 RimK-like ATP-grasp domain LPH45_05465 PF00486 Transcriptional regulatory protein, C terminal LPH45_05465 PF00072 Response regulator receiver domain LPH45_05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_05470 PF00512 His Kinase A (phospho-acceptor) domain LPH45_05470 PF00989 PAS fold LPH45_05470 PF11808 Phosphate regulon sensor protein PhoR LPH45_05475 PF01121 Dephospho-CoA kinase LPH45_05480 PF01478 Type IV leader peptidase family LPH45_05480 PF06750 Bacterial Peptidase A24 N-terminal domain LPH45_05485 PF00482 Type II secretion system (T2SS), protein F LPH45_05490 PF07963 Prokaryotic N-terminal methylation motif LPH45_05490 PF00114 Pilin (bacterial filament) LPH45_05505 PF07963 Prokaryotic N-terminal methylation motif LPH45_05505 PF00114 Pilin (bacterial filament) LPH45_05510 PF07963 Prokaryotic N-terminal methylation motif LPH45_05510 PF00114 Pilin (bacterial filament) LPH45_05520 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH45_05520 PF00437 Type II/IV secretion system protein LPH45_05525 PF00158 Sigma-54 interaction domain LPH45_05525 PF00072 Response regulator receiver domain LPH45_05525 PF02954 Bacterial regulatory protein, Fis family LPH45_05530 PF00512 His Kinase A (phospho-acceptor) domain LPH45_05530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_05535 PF00549 CoA-ligase LPH45_05535 PF08442 ATP-grasp domain LPH45_05540 PF00549 CoA-ligase LPH45_05540 PF02629 CoA binding domain LPH45_05545 PF12631 MnmE helical domain LPH45_05545 PF10396 GTP-binding protein TrmE N-terminus LPH45_05545 PF01926 50S ribosome-binding GTPase LPH45_05555 PF14849 YidC periplasmic domain LPH45_05555 PF02096 60Kd inner membrane protein LPH45_05560 PF00825 Ribonuclease P LPH45_05565 PF00468 Ribosomal protein L34 LPH45_05570 PF00308 Bacterial dnaA protein LPH45_05570 PF11638 DnaA N-terminal domain LPH45_05570 PF08299 Bacterial dnaA protein helix-turn-helix LPH45_05575 PF02767 DNA polymerase III beta subunit, central domain LPH45_05575 PF02768 DNA polymerase III beta subunit, C-terminal domain LPH45_05575 PF00712 DNA polymerase III beta subunit, N-terminal domain LPH45_05580 PF02463 RecF/RecN/SMC N terminal domain LPH45_05585 PF00204 DNA gyrase B LPH45_05585 PF00986 DNA gyrase B subunit, carboxyl terminus LPH45_05585 PF18053 DNA gyrase B subunit insert domain LPH45_05585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_05585 PF01751 Toprim domain LPH45_05595 PF01435 Peptidase family M48 LPH45_05605 PF03544 Gram-negative bacterial TonB protein C-terminal LPH45_05610 PF01618 MotA/TolQ/ExbB proton channel family LPH45_05615 PF02472 Biopolymer transport protein ExbD/TolR LPH45_05620 PF02472 Biopolymer transport protein ExbD/TolR LPH45_05640 PF01218 Coproporphyrinogen III oxidase LPH45_05665 PF00793 DAHP synthetase I family LPH45_05670 PF07963 Prokaryotic N-terminal methylation motif LPH45_05670 PF00114 Pilin (bacterial filament) LPH45_05690 PF05567 Neisseria PilC beta-propeller domain LPH45_05695 PF00114 Pilin (bacterial filament) LPH45_05695 PF07963 Prokaryotic N-terminal methylation motif LPH45_05700 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LPH45_05705 PF00155 Aminotransferase class I and II LPH45_05710 PF01741 Large-conductance mechanosensitive channel, MscL LPH45_05735 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LPH45_05745 PF02559 CarD-like/TRCF domain LPH45_05745 PF00270 DEAD/DEAH box helicase LPH45_05745 PF00271 Helicase conserved C-terminal domain LPH45_05745 PF03461 TRCF domain LPH45_05745 PF17757 UvrB interaction domain LPH45_05750 PF01220 Dehydroquinase class II LPH45_05755 PF00364 Biotin-requiring enzyme LPH45_05760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH45_05760 PF00289 Biotin carboxylase, N-terminal domain LPH45_05760 PF02785 Biotin carboxylase C-terminal domain LPH45_05765 PF13361 UvrD-like helicase C-terminal domain LPH45_05765 PF00580 UvrD/REP helicase N-terminal domain LPH45_05775 PF00175 Oxidoreductase NAD-binding domain LPH45_05775 PF00042 Globin LPH45_05775 PF00970 Oxidoreductase FAD-binding domain LPH45_05785 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LPH45_05795 PF02195 ParB-like nuclease domain LPH45_05795 PF06613 KorB C-terminal beta-barrel domain LPH45_05795 PF08535 KorB domain LPH45_05810 PF04055 Radical SAM superfamily LPH45_05810 PF06968 Biotin and Thiamin Synthesis associated domain LPH45_05815 PF01734 Patatin-like phospholipase LPH45_05820 PF01040 UbiA prenyltransferase family LPH45_05835 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LPH45_05870 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH45_05870 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH45_05880 PF02978 Signal peptide binding domain LPH45_05880 PF00448 SRP54-type protein, GTPase domain LPH45_05880 PF02881 SRP54-type protein, helical bundle domain LPH45_05900 PF13953 PapC C-terminal domain LPH45_05900 PF13954 PapC N-terminal domain LPH45_05900 PF00577 Outer membrane usher protein LPH45_05905 PF02753 Pili assembly chaperone PapD, C-terminal domain LPH45_05905 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LPH45_05910 PF16970 Type-1 fimbrial protein, A LPH45_05915 PF02464 Competence-damaged protein LPH45_05920 PF00083 Sugar (and other) transporter LPH45_05925 PF01926 50S ribosome-binding GTPase LPH45_05925 PF13167 GTP-binding GTPase N-terminal LPH45_05925 PF16360 GTP-binding GTPase Middle Region LPH45_05930 PF17209 Hfq protein LPH45_05940 PF00809 Pterin binding enzyme LPH45_05945 PF17862 AAA+ lid domain LPH45_05945 PF00004 ATPase family associated with various cellular activities (AAA) LPH45_05945 PF01434 Peptidase family M41 LPH45_05945 PF06480 FtsH Extracellular LPH45_05950 PF01728 FtsJ-like methyltransferase LPH45_05955 PF01985 CRS1 / YhbY (CRM) domain LPH45_05970 PF00920 Dehydratase family LPH45_06000 PF03279 Bacterial lipid A biosynthesis acyltransferase LPH45_06005 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LPH45_06025 PF00886 Ribosomal protein S16 LPH45_06030 PF01782 RimM N-terminal domain LPH45_06030 PF05239 PRC-barrel domain LPH45_06035 PF01746 tRNA (Guanine-1)-methyltransferase LPH45_06040 PF01245 Ribosomal protein L19 LPH45_06045 PF00557 Metallopeptidase family M24 LPH45_06055 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LPH45_06055 PF14602 Hexapeptide repeat of succinyl-transferase LPH45_06055 PF00132 Bacterial transferase hexapeptide (six repeats) LPH45_06060 PF03960 ArsC family LPH45_06065 PF07687 Peptidase dimerisation domain LPH45_06065 PF01546 Peptidase family M20/M25/M40 LPH45_06070 PF13537 Glutamine amidotransferase domain LPH45_06070 PF00733 Asparagine synthase LPH45_06085 PF03060 Nitronate monooxygenase LPH45_06095 PF01726 LexA DNA binding domain LPH45_06095 PF00717 Peptidase S24-like LPH45_06100 PF00154 recA bacterial DNA recombination protein LPH45_06105 PF02272 DHHA1 domain LPH45_06105 PF01411 tRNA synthetases class II (A) LPH45_06105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH45_06110 PF02599 Global regulator protein family LPH45_06120 PF01432 Peptidase family M3 LPH45_06135 PF00394 Multicopper oxidase LPH45_06135 PF07731 Multicopper oxidase LPH45_06135 PF07732 Multicopper oxidase LPH45_06140 PF05275 Copper resistance protein B precursor (CopB) LPH45_06145 PF10458 Valyl tRNA synthetase tRNA binding arm LPH45_06145 PF00133 tRNA synthetases class I (I, L, M and V) LPH45_06145 PF08264 Anticodon-binding domain of tRNA LPH45_06165 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH45_06165 PF00883 Cytosol aminopeptidase family, catalytic domain LPH45_06185 PF01380 SIS domain LPH45_06200 PF17284 Spermidine synthase tetramerisation domain LPH45_06205 PF17810 Arginine decarboxylase helical bundle domain LPH45_06205 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LPH45_06205 PF17944 Arginine decarboxylase C-terminal helical extension LPH45_06210 PF00106 short chain dehydrogenase LPH45_06220 PF00750 tRNA synthetases class I (R) LPH45_06220 PF03485 Arginyl tRNA synthetase N terminal domain LPH45_06220 PF05746 DALR anticodon binding domain LPH45_06225 PF04002 RadC-like JAB domain LPH45_06230 PF02441 Flavoprotein LPH45_06230 PF04127 DNA / pantothenate metabolism flavoprotein LPH45_06235 PF00692 dUTPase LPH45_06240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH45_06240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH45_06240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH45_06240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH45_06250 PF00156 Phosphoribosyl transferase domain LPH45_06300 PF07690 Major Facilitator Superfamily LPH45_06305 PF03702 Anhydro-N-acetylmuramic acid kinase LPH45_06310 PF04225 Opacity-associated protein A LysM-like domain LPH45_06310 PF01551 Peptidase family M23 LPH45_06315 PF00579 tRNA synthetases class I (W and Y) LPH45_06345 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH45_06345 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH45_06375 PF00009 Elongation factor Tu GTP binding domain LPH45_06375 PF16658 Class II release factor RF3, C-terminal domain LPH45_06380 PF03006 Haemolysin-III related LPH45_06385 PF00535 Glycosyl transferase family 2 LPH45_06390 PF01026 TatD related DNase LPH45_06405 PF01597 Glycine cleavage H-protein LPH45_06410 PF01571 Aminomethyltransferase folate-binding domain LPH45_06410 PF08669 Glycine cleavage T-protein C-terminal barrel domain LPH45_06420 PF01145 SPFH domain / Band 7 family LPH45_06420 PF16200 C-terminal region of band_7 LPH45_06425 PF03819 MazG nucleotide pyrophosphohydrolase domain LPH45_06430 PF00459 Inositol monophosphatase family LPH45_06435 PF00293 NUDIX domain LPH45_06440 PF00202 Aminotransferase class-III LPH45_06445 PF04452 RNA methyltransferase LPH45_06455 PF00271 Helicase conserved C-terminal domain LPH45_06455 PF00270 DEAD/DEAH box helicase LPH45_06460 PF01242 6-pyruvoyl tetrahydropterin synthase LPH45_06485 PF03653 Uncharacterised protein family (UPF0093) LPH45_06490 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LPH45_06495 PF01336 OB-fold nucleic acid binding domain LPH45_06495 PF14579 Helix-hairpin-helix motif LPH45_06495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LPH45_06495 PF07733 Bacterial DNA polymerase III alpha NTPase domain LPH45_06495 PF02811 PHP domain LPH45_06500 PF01259 SAICAR synthetase LPH45_06505 PF00226 DnaJ domain LPH45_06505 PF05099 Tellurite resistance protein TerB LPH45_06510 PF00834 Ribulose-phosphate 3 epimerase family LPH45_06520 PF04715 Anthranilate synthase component I, N terminal region LPH45_06520 PF00425 chorismate binding enzyme LPH45_06525 PF00117 Glutamine amidotransferase class-I LPH45_06530 PF02885 Glycosyl transferase family, helical bundle domain LPH45_06530 PF00591 Glycosyl transferase family, a/b domain LPH45_06535 PF00218 Indole-3-glycerol phosphate synthase LPH45_06550 PF12849 PBP superfamily domain LPH45_06570 PF01321 Creatinase/Prolidase N-terminal domain LPH45_06570 PF00557 Metallopeptidase family M24 LPH45_06585 PF01702 Queuine tRNA-ribosyltransferase LPH45_06590 PF02699 Preprotein translocase subunit LPH45_06595 PF02355 Protein export membrane protein LPH45_06595 PF13721 SecD export protein N-terminal TM region LPH45_06595 PF07549 SecD/SecF GG Motif LPH45_06600 PF07549 SecD/SecF GG Motif LPH45_06600 PF02355 Protein export membrane protein LPH45_06610 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH45_06610 PF12626 Polymerase A arginine-rich C-terminus LPH45_06610 PF01743 Poly A polymerase head domain LPH45_06615 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LPH45_06620 PF02548 Ketopantoate hydroxymethyltransferase LPH45_06625 PF02569 Pantoate-beta-alanine ligase LPH45_06630 PF02261 Aspartate decarboxylase LPH45_06635 PF00342 Phosphoglucose isomerase LPH45_06645 PF17384 RimP C-terminal SH3 domain LPH45_06645 PF02576 RimP N-terminal domain LPH45_06650 PF13184 NusA-like KH domain LPH45_06650 PF08529 NusA N-terminal domain LPH45_06650 PF00575 S1 RNA binding domain LPH45_06655 PF11987 Translation-initiation factor 2 LPH45_06655 PF08364 Bacterial translation initiation factor IF-2 associated region LPH45_06655 PF00009 Elongation factor Tu GTP binding domain LPH45_06655 PF04760 Translation initiation factor IF-2, N-terminal region LPH45_06660 PF02033 Ribosome-binding factor A LPH45_06665 PF01509 TruB family pseudouridylate synthase (N terminal domain) LPH45_06665 PF16198 tRNA pseudouridylate synthase B C-terminal domain LPH45_06665 PF09157 Pseudouridine synthase II TruB, C-terminal LPH45_06670 PF00312 Ribosomal protein S15 LPH45_06675 PF00575 S1 RNA binding domain LPH45_06675 PF03725 3' exoribonuclease family, domain 2 LPH45_06675 PF01138 3' exoribonuclease family, domain 1 LPH45_06675 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LPH45_06675 PF00013 KH domain LPH45_06680 PF01638 HxlR-like helix-turn-helix LPH45_06685 PF05368 NmrA-like family LPH45_06690 PF00873 AcrB/AcrD/AcrF family LPH45_06700 PF00999 Sodium/hydrogen exchanger family LPH45_06720 PF03880 DbpA RNA binding domain LPH45_06720 PF00270 DEAD/DEAH box helicase LPH45_06720 PF00271 Helicase conserved C-terminal domain LPH45_06725 PF01012 Electron transfer flavoprotein domain LPH45_06725 PF00766 Electron transfer flavoprotein FAD-binding domain LPH45_06730 PF01012 Electron transfer flavoprotein domain LPH45_06735 PF16363 GDP-mannose 4,6 dehydratase LPH45_06740 PF00483 Nucleotidyl transferase LPH45_06745 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LPH45_06750 PF04321 RmlD substrate binding domain LPH45_06755 PF01050 Mannose-6-phosphate isomerase LPH45_06755 PF00483 Nucleotidyl transferase LPH45_06760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH45_06760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH45_06760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH45_06760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH45_06800 PF00082 Subtilase family LPH45_06800 PF12951 Passenger-associated-transport-repeat LPH45_06800 PF03797 Autotransporter beta-domain LPH45_06805 PF06779 Uncharacterised MFS-type transporter YbfB LPH45_06810 PF07669 Eco57I restriction-modification methylase LPH45_06820 PF00365 Phosphofructokinase LPH45_06830 PF02875 Mur ligase family, glutamate ligase domain LPH45_06830 PF01225 Mur ligase family, catalytic domain LPH45_06830 PF08245 Mur ligase middle domain LPH45_06835 PF01569 PAP2 superfamily LPH45_06855 PF00892 EamA-like transporter family LPH45_06860 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH45_06860 PF00883 Cytosol aminopeptidase family, catalytic domain LPH45_06870 PF01594 AI-2E family transporter LPH45_06890 PF00595 PDZ domain LPH45_06895 PF01370 NAD dependent epimerase/dehydratase family LPH45_06895 PF08338 Domain of unknown function (DUF1731) LPH45_06900 PF13193 AMP-binding enzyme C-terminal domain LPH45_06900 PF00501 AMP-binding enzyme LPH45_06905 PF00694 Aconitase C-terminal domain LPH45_06905 PF00330 Aconitase family (aconitate hydratase) LPH45_06920 PF11791 Aconitate B N-terminal domain LPH45_06920 PF06434 Aconitate hydratase 2 N-terminus LPH45_06920 PF00330 Aconitase family (aconitate hydratase) LPH45_06935 PF02384 N-6 DNA Methylase LPH45_06940 PF01420 Type I restriction modification DNA specificity domain LPH45_06955 PF18766 SWI2/SNF2 ATPase LPH45_06955 PF11867 Domain of unknown function (DUF3387) LPH45_06955 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH45_06975 PF00121 Triosephosphate isomerase LPH45_06990 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LPH45_06995 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LPH45_07000 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LPH45_07005 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LPH45_07015 PF10531 SLBB domain LPH45_07015 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LPH45_07015 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LPH45_07020 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LPH45_07020 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LPH45_07020 PF00384 Molybdopterin oxidoreductase LPH45_07025 PF00146 NADH dehydrogenase LPH45_07030 PF12838 4Fe-4S dicluster domain LPH45_07035 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LPH45_07040 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPH45_07045 PF00361 Proton-conducting membrane transporter LPH45_07045 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPH45_07050 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LPH45_07050 PF00361 Proton-conducting membrane transporter LPH45_07055 PF00361 Proton-conducting membrane transporter LPH45_07060 PF00106 short chain dehydrogenase LPH45_07065 PF03600 Citrate transporter LPH45_07075 PF00486 Transcriptional regulatory protein, C terminal LPH45_07075 PF00072 Response regulator receiver domain LPH45_07080 PF00512 His Kinase A (phospho-acceptor) domain LPH45_07080 PF08521 Two-component sensor kinase N-terminal LPH45_07080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_07090 PF00196 Bacterial regulatory proteins, luxR family LPH45_07090 PF00072 Response regulator receiver domain LPH45_07095 PF00512 His Kinase A (phospho-acceptor) domain LPH45_07095 PF01627 Hpt domain LPH45_07095 PF00072 Response regulator receiver domain LPH45_07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_07095 PF00672 HAMP domain LPH45_07105 PF00375 Sodium:dicarboxylate symporter family LPH45_07110 PF00390 Malic enzyme, N-terminal domain LPH45_07110 PF03949 Malic enzyme, NAD binding domain LPH45_07110 PF01515 Phosphate acetyl/butaryl transferase LPH45_07115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_07115 PF00183 Hsp90 protein LPH45_07125 PF01467 Cytidylyltransferase-like LPH45_07135 PF00037 4Fe-4S binding domain LPH45_07145 PF00990 Diguanylate cyclase, GGDEF domain LPH45_07150 PF01551 Peptidase family M23 LPH45_07150 PF01476 LysM domain LPH45_07155 PF01979 Amidohydrolase family LPH45_07160 PF01809 Putative membrane protein insertion efficiency factor LPH45_07165 PF01258 Prokaryotic dksA/traR C4-type zinc finger LPH45_07195 PF02657 Fe-S metabolism associated domain LPH45_07200 PF01406 tRNA synthetases class I (C) catalytic domain LPH45_07200 PF09190 DALR domain LPH45_07210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH45_07210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH45_07215 PF00764 Arginosuccinate synthase LPH45_07220 PF01546 Peptidase family M20/M25/M40 LPH45_07220 PF07687 Peptidase dimerisation domain LPH45_07225 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LPH45_07225 PF00696 Amino acid kinase family LPH45_07235 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH45_07240 PF00206 Lyase LPH45_07250 PF00696 Amino acid kinase family LPH45_07250 PF01472 PUA domain LPH45_07255 PF00171 Aldehyde dehydrogenase family LPH45_07265 PF00239 Resolvase, N terminal domain LPH45_07265 PF02796 Helix-turn-helix domain of resolvase LPH45_07290 PF00239 Resolvase, N terminal domain LPH45_07290 PF02796 Helix-turn-helix domain of resolvase LPH45_07305 PF01526 Tn3 transposase DDE domain LPH45_07305 PF13700 Domain of unknown function (DUF4158) LPH45_07335 PF03524 Conjugal transfer protein LPH45_07375 PF01593 Flavin containing amine oxidoreductase LPH45_07385 PF02627 Carboxymuconolactone decarboxylase family LPH45_07405 PF03466 LysR substrate binding domain LPH45_07405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH45_07410 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LPH45_07415 PF09386 Antitoxin ParD LPH45_07420 PF02796 Helix-turn-helix domain of resolvase LPH45_07420 PF00239 Resolvase, N terminal domain LPH45_07445 PF00239 Resolvase, N terminal domain LPH45_07445 PF02796 Helix-turn-helix domain of resolvase LPH45_07485 PF06594 Haemolysin-type calcium binding protein related domain LPH45_07485 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH45_07490 PF14437 MafB19-like deaminase LPH45_07495 PF01325 Iron dependent repressor, N-terminal DNA binding domain LPH45_07495 PF02742 Iron dependent repressor, metal binding and dimerisation domain LPH45_07500 PF01566 Natural resistance-associated macrophage protein LPH45_07515 PF04376 Arginine-tRNA-protein transferase, N terminus LPH45_07515 PF04377 Arginine-tRNA-protein transferase, C terminus LPH45_07550 PF12951 Passenger-associated-transport-repeat LPH45_07550 PF00082 Subtilase family LPH45_07550 PF03797 Autotransporter beta-domain LPH45_07580 PF01553 Acyltransferase LPH45_07590 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LPH45_07590 PF05221 S-adenosyl-L-homocysteine hydrolase LPH45_07605 PF01351 Ribonuclease HII LPH45_07610 PF02684 Lipid-A-disaccharide synthetase LPH45_07615 PF00132 Bacterial transferase hexapeptide (six repeats) LPH45_07615 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LPH45_07620 PF07977 FabA-like domain LPH45_07625 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LPH45_07625 PF00132 Bacterial transferase hexapeptide (six repeats) LPH45_07630 PF07244 Surface antigen variable number repeat LPH45_07630 PF01103 Surface antigen LPH45_07635 PF02163 Peptidase family M50 LPH45_07635 PF17820 PDZ domain LPH45_07640 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LPH45_07640 PF13288 DXP reductoisomerase C-terminal domain LPH45_07640 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LPH45_07650 PF01255 Putative undecaprenyl diphosphate synthase LPH45_07655 PF01765 Ribosome recycling factor LPH45_07680 PF04305 Protein of unknown function (DUF455) LPH45_07685 PF00696 Amino acid kinase family LPH45_07760 PF01081 KDPG and KHG aldolase LPH45_07765 PF00920 Dehydratase family LPH45_07770 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LPH45_07775 PF02685 Glucokinase LPH45_07780 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LPH45_07780 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LPH45_07785 PF00005 ABC transporter LPH45_07785 PF17912 MalK OB fold domain LPH45_07800 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH45_07805 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH45_07810 PF00890 FAD binding domain LPH45_07810 PF02910 Fumarate reductase flavoprotein C-term LPH45_07815 PF13085 2Fe-2S iron-sulfur cluster binding domain LPH45_07815 PF13237 4Fe-4S dicluster domain LPH45_07820 PF03937 Flavinator of succinate dehydrogenase LPH45_07830 PF02687 FtsX-like permease family LPH45_07830 PF12704 MacB-like periplasmic core domain LPH45_07835 PF00005 ABC transporter LPH45_07840 PF00753 Metallo-beta-lactamase superfamily LPH45_07840 PF03772 Competence protein LPH45_07855 PF00005 ABC transporter LPH45_07855 PF00664 ABC transporter transmembrane region LPH45_07860 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LPH45_07865 PF10609 NUBPL iron-transfer P-loop NTPase LPH45_07865 PF01883 Iron-sulfur cluster assembly protein LPH45_07880 PF13091 PLD-like domain LPH45_07905 PF03358 NADPH-dependent FMN reductase LPH45_07910 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LPH45_07910 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LPH45_07925 PF01300 Telomere recombination LPH45_07930 PF13368 Topoisomerase C-terminal repeat LPH45_07930 PF01131 DNA topoisomerase LPH45_07930 PF01751 Toprim domain LPH45_07940 PF04361 Protein of unknown function (DUF494) LPH45_07945 PF17782 DprA winged helix domain LPH45_07945 PF02481 DNA recombination-mediator protein A LPH45_07955 PF01327 Polypeptide deformylase LPH45_07960 PF00551 Formyl transferase LPH45_07960 PF02911 Formyl transferase, C-terminal domain LPH45_07965 PF01189 16S rRNA methyltransferase RsmB/F LPH45_07965 PF01029 NusB family LPH45_07970 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LPH45_07985 PF07963 Prokaryotic N-terminal methylation motif LPH45_07985 PF00114 Pilin (bacterial filament) LPH45_08105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH45_08105 PF00476 DNA polymerase family A LPH45_08105 PF01612 3'-5' exonuclease LPH45_08105 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH45_08110 PF01113 Dihydrodipicolinate reductase, N-terminus LPH45_08110 PF05173 Dihydrodipicolinate reductase, C-terminus LPH45_08115 PF00117 Glutamine amidotransferase class-I LPH45_08115 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LPH45_08120 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LPH45_08120 PF02142 MGS-like domain LPH45_08120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH45_08125 PF01272 Transcription elongation factor, GreA/GreB, C-term LPH45_08125 PF03449 Transcription elongation factor, N-terminal LPH45_08135 PF01368 DHH family LPH45_08135 PF17768 RecJ OB domain LPH45_08135 PF02272 DHHA1 domain LPH45_08145 PF00152 tRNA synthetases class II (D, K and N) LPH45_08145 PF01336 OB-fold nucleic acid binding domain LPH45_08150 PF00072 Response regulator receiver domain LPH45_08155 PF00512 His Kinase A (phospho-acceptor) domain LPH45_08155 PF01627 Hpt domain LPH45_08155 PF00072 Response regulator receiver domain LPH45_08155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_08160 PF00378 Enoyl-CoA hydratase/isomerase LPH45_08165 PF01842 ACT domain LPH45_08165 PF00696 Amino acid kinase family LPH45_08175 PF08245 Mur ligase middle domain LPH45_08195 PF00293 NUDIX domain LPH45_08205 PF02219 Methylenetetrahydrofolate reductase LPH45_08215 PF02545 Maf-like protein LPH45_08220 PF00575 S1 RNA binding domain LPH45_08220 PF10150 Ribonuclease E/G family LPH45_08230 PF01523 Putative modulator of DNA gyrase LPH45_08235 PF04751 Protein of unknown function (DUF615) LPH45_08240 PF01523 Putative modulator of DNA gyrase LPH45_08250 PF06250 YhcG PDDEXK nuclease domain LPH45_08250 PF17761 DUF1016 N-terminal domain LPH45_08280 PF03466 LysR substrate binding domain LPH45_08280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH45_08285 PF03358 NADPH-dependent FMN reductase LPH45_08295 PF00107 Zinc-binding dehydrogenase LPH45_08295 PF08240 Alcohol dehydrogenase GroES-like domain LPH45_08310 PF00248 Aldo/keto reductase family LPH45_08325 PF14602 Hexapeptide repeat of succinyl-transferase LPH45_08325 PF00132 Bacterial transferase hexapeptide (six repeats) LPH45_08325 PF12804 MobA-like NTP transferase domain LPH45_08335 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LPH45_08335 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LPH45_08340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH45_08340 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH45_08345 PF00231 ATP synthase LPH45_08350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH45_08350 PF00306 ATP synthase alpha/beta chain, C terminal domain LPH45_08350 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH45_08355 PF00213 ATP synthase delta (OSCP) subunit LPH45_08360 PF00430 ATP synthase B/B' CF(0) LPH45_08365 PF00137 ATP synthase subunit C LPH45_08370 PF00119 ATP synthase A chain LPH45_08380 PF00338 Ribosomal protein S10p/S20e LPH45_08385 PF00297 Ribosomal protein L3 LPH45_08390 PF00573 Ribosomal protein L4/L1 family LPH45_08395 PF00276 Ribosomal protein L23 LPH45_08400 PF00181 Ribosomal Proteins L2, RNA binding domain LPH45_08400 PF03947 Ribosomal Proteins L2, C-terminal domain LPH45_08405 PF00203 Ribosomal protein S19 LPH45_08410 PF00237 Ribosomal protein L22p/L17e LPH45_08415 PF00189 Ribosomal protein S3, C-terminal domain LPH45_08415 PF07650 KH domain LPH45_08420 PF00252 Ribosomal protein L16p/L10e LPH45_08425 PF00831 Ribosomal L29 protein LPH45_08430 PF00366 Ribosomal protein S17 LPH45_08435 PF00238 Ribosomal protein L14p/L23e LPH45_08440 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LPH45_08440 PF00467 KOW motif LPH45_08445 PF00281 Ribosomal protein L5 LPH45_08445 PF00673 ribosomal L5P family C-terminus LPH45_08450 PF00253 Ribosomal protein S14p/S29e LPH45_08455 PF00410 Ribosomal protein S8 LPH45_08460 PF00347 Ribosomal protein L6 LPH45_08465 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LPH45_08470 PF03719 Ribosomal protein S5, C-terminal domain LPH45_08470 PF00333 Ribosomal protein S5, N-terminal domain LPH45_08475 PF00327 Ribosomal protein L30p/L7e LPH45_08480 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LPH45_08485 PF00344 SecY translocase LPH45_08490 PF00416 Ribosomal protein S13/S18 LPH45_08495 PF00411 Ribosomal protein S11 LPH45_08500 PF01479 S4 domain LPH45_08500 PF00163 Ribosomal protein S4/S9 N-terminal domain LPH45_08505 PF01000 RNA polymerase Rpb3/RpoA insert domain LPH45_08505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LPH45_08505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LPH45_08510 PF01196 Ribosomal protein L17 LPH45_08515 PF04380 Membrane fusogenic activity LPH45_08520 PF01078 Magnesium chelatase, subunit ChlI LPH45_08520 PF13335 Magnesium chelatase, subunit ChlI C-terminal LPH45_08525 PF00561 alpha/beta hydrolase fold LPH45_08540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH45_08540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH45_08540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH45_08555 PF05697 Bacterial trigger factor protein (TF) LPH45_08555 PF05698 Bacterial trigger factor protein (TF) C-terminus LPH45_08560 PF00574 Clp protease LPH45_08565 PF06689 ClpX C4-type zinc finger LPH45_08565 PF07724 AAA domain (Cdc48 subfamily) LPH45_08565 PF10431 C-terminal, D2-small domain, of ClpB protein LPH45_08570 PF00004 ATPase family associated with various cellular activities (AAA) LPH45_08570 PF05362 Lon protease (S16) C-terminal proteolytic domain LPH45_08570 PF02190 ATP-dependent protease La (LON) substrate-binding domain LPH45_08575 PF00216 Bacterial DNA-binding protein LPH45_08600 PF00317 Ribonucleotide reductase, all-alpha domain LPH45_08600 PF02867 Ribonucleotide reductase, barrel domain LPH45_08600 PF03477 ATP cone domain LPH45_08605 PF00268 Ribonucleotide reductase, small chain LPH45_08630 PF00849 RNA pseudouridylate synthase LPH45_08630 PF01479 S4 domain LPH45_08635 PF13419 Haloacid dehalogenase-like hydrolase LPH45_08645 PF00830 Ribosomal L28 family LPH45_08650 PF00471 Ribosomal protein L33 LPH45_08655 PF13396 Phospholipase_D-nuclease N-terminal LPH45_08655 PF13091 PLD-like domain LPH45_08670 PF00114 Pilin (bacterial filament) LPH45_08670 PF07963 Prokaryotic N-terminal methylation motif LPH45_08690 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH45_08690 PF01612 3'-5' exonuclease LPH45_08690 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH45_08690 PF00476 DNA polymerase family A LPH45_08710 PF00959 Phage lysozyme LPH45_08730 PF01555 DNA methylase LPH45_08750 PF00043 Glutathione S-transferase, C-terminal domain LPH45_08750 PF02798 Glutathione S-transferase, N-terminal domain LPH45_08755 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LPH45_08755 PF00056 lactate/malate dehydrogenase, NAD binding domain LPH45_08760 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPH45_08765 PF00009 Elongation factor Tu GTP binding domain LPH45_08765 PF03144 Elongation factor Tu domain 2 LPH45_08765 PF00679 Elongation factor G C-terminus LPH45_08780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH45_08780 PF00529 HlyD membrane-fusion protein of T1SS LPH45_08805 PF03412 Peptidase C39 family LPH45_08805 PF00664 ABC transporter transmembrane region LPH45_08805 PF00005 ABC transporter LPH45_08810 PF01061 ABC-2 type transporter LPH45_08815 PF00005 ABC transporter LPH45_08820 PF05567 Neisseria PilC beta-propeller domain LPH45_08835 PF00271 Helicase conserved C-terminal domain LPH45_08835 PF04408 Helicase associated domain (HA2) LPH45_08835 PF00270 DEAD/DEAH box helicase LPH45_08835 PF08482 ATP-dependent helicase C-terminal LPH45_08845 PF13185 GAF domain LPH45_08850 PF17243 POTRA domain TamA domain 1 LPH45_08850 PF01103 Surface antigen LPH45_08855 PF04357 TamB, inner membrane protein subunit of TAM complex LPH45_08870 PF00285 Citrate synthase, C-terminal domain LPH45_08875 PF00330 Aconitase family (aconitate hydratase) LPH45_08875 PF00694 Aconitase C-terminal domain LPH45_08880 PF04303 PrpF protein LPH45_08900 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LPH45_08900 PF01835 MG2 domain LPH45_08900 PF17962 Bacterial macroglobulin domain 6 LPH45_08900 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LPH45_08900 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LPH45_08900 PF07703 Alpha-2-macroglobulin bait region domain LPH45_08900 PF00207 Alpha-2-macroglobulin family LPH45_08900 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LPH45_08905 PF02583 Metal-sensitive transcriptional repressor LPH45_08910 PF03824 High-affinity nickel-transport protein LPH45_08915 PF07859 alpha/beta hydrolase fold LPH45_08920 PF12852 Cupin LPH45_08920 PF12833 Helix-turn-helix domain LPH45_08935 PF02868 Thermolysin metallopeptidase, alpha-helical domain LPH45_08935 PF01447 Thermolysin metallopeptidase, catalytic domain LPH45_08935 PF16485 Protealysin propeptide LPH45_08940 PF00929 Exonuclease LPH45_08945 PF00924 Mechanosensitive ion channel LPH45_08945 PF05552 Conserved TM helix LPH45_08950 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LPH45_08950 PF00391 PEP-utilising enzyme, mobile domain LPH45_08950 PF02896 PEP-utilising enzyme, TIM barrel domain LPH45_08955 PF03618 Kinase/pyrophosphorylase LPH45_08975 PF04286 Protein of unknown function (DUF445) LPH45_08990 PF04359 Protein of unknown function (DUF493) LPH45_08995 PF03099 Biotin/lipoate A/B protein ligase family LPH45_09000 PF04055 Radical SAM superfamily LPH45_09000 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LPH45_09030 PF01595 Cyclin M transmembrane N-terminal domain LPH45_09030 PF00571 CBS domain LPH45_09030 PF03471 Transporter associated domain LPH45_09045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_09045 PF00986 DNA gyrase B subunit, carboxyl terminus LPH45_09045 PF00204 DNA gyrase B LPH45_09045 PF01751 Toprim domain LPH45_09055 PF06418 CTP synthase N-terminus LPH45_09055 PF00117 Glutamine amidotransferase class-I LPH45_09060 PF00793 DAHP synthetase I family LPH45_09065 PF00113 Enolase, C-terminal TIM barrel domain LPH45_09065 PF03952 Enolase, N-terminal domain LPH45_09070 PF04977 Septum formation initiator LPH45_09075 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LPH45_09080 PF02542 YgbB family LPH45_09085 PF01713 Smr domain LPH45_09110 PF03886 ABC-type transport auxiliary lipoprotein component LPH45_09110 PF02470 MlaD protein LPH45_09115 PF00005 ABC transporter LPH45_09120 PF02405 Permease MlaE LPH45_09195 PF04093 rod shape-determining protein MreD LPH45_09200 PF00905 Penicillin binding protein transpeptidase domain LPH45_09200 PF03717 Penicillin-binding Protein dimerisation domain LPH45_09205 PF01098 Cell cycle protein LPH45_09210 PF02547 Queuosine biosynthesis protein LPH45_09215 PF02824 TGS domain LPH45_09215 PF04607 Region found in RelA / SpoT proteins LPH45_09215 PF13291 ACT domain LPH45_09230 PF03776 Septum formation topological specificity factor MinE LPH45_09235 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LPH45_09240 PF05209 Septum formation inhibitor MinC, N-terminal domain LPH45_09240 PF03775 Septum formation inhibitor MinC, C-terminal domain LPH45_09260 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH45_09270 PF01292 Prokaryotic cytochrome b561 LPH45_09275 PF04264 YceI-like domain LPH45_09280 PF00512 His Kinase A (phospho-acceptor) domain LPH45_09280 PF09308 LuxQ, periplasmic LPH45_09280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_09280 PF00072 Response regulator receiver domain LPH45_09290 PF01208 Uroporphyrinogen decarboxylase (URO-D) LPH45_09295 PF01761 3-dehydroquinate synthase LPH45_09300 PF01202 Shikimate kinase LPH45_09305 PF01243 Pyridoxamine 5'-phosphate oxidase LPH45_09305 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LPH45_09315 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LPH45_09315 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH45_09325 PF03932 CutC family LPH45_09345 PF00528 Binding-protein-dependent transport system inner membrane component LPH45_09350 PF00528 Binding-protein-dependent transport system inner membrane component LPH45_09355 PF12857 TOBE-like domain LPH45_09355 PF00005 ABC transporter LPH45_09395 PF01381 Helix-turn-helix LPH45_09475 PF10065 Uncharacterized conserved protein (DUF2303) LPH45_09500 PF04545 Sigma-70, region 4 LPH45_09500 PF04539 Sigma-70 region 3 LPH45_09500 PF04542 Sigma-70 region 2 LPH45_09500 PF00140 Sigma-70 factor, region 1.2 LPH45_09500 PF03979 Sigma-70 factor, region 1.1 LPH45_09500 PF04546 Sigma-70, non-essential region LPH45_09510 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH45_09510 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH45_09520 PF02321 Outer membrane efflux protein LPH45_09525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH45_09525 PF00529 HlyD membrane-fusion protein of T1SS LPH45_09530 PF07690 Major Facilitator Superfamily LPH45_09535 PF12697 Alpha/beta hydrolase family LPH45_09540 PF00155 Aminotransferase class I and II LPH45_09550 PF01040 UbiA prenyltransferase family LPH45_09555 PF00753 Metallo-beta-lactamase superfamily LPH45_09560 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH45_09560 PF01743 Poly A polymerase head domain LPH45_09560 PF01966 HD domain LPH45_09565 PF14718 Soluble lytic murein transglycosylase L domain LPH45_09565 PF01464 Transglycosylase SLT domain LPH45_09575 PF02666 Phosphatidylserine decarboxylase LPH45_09630 PF17831 Pyruvate dehydrogenase E1 component middle domain LPH45_09630 PF00456 Transketolase, thiamine diphosphate binding domain LPH45_09635 PF00698 Acyl transferase domain LPH45_09645 PF00550 Phosphopantetheine attachment site LPH45_09650 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH45_09650 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH45_09655 PF04715 Anthranilate synthase component I, N terminal region LPH45_09655 PF00425 chorismate binding enzyme LPH45_09660 PF02618 YceG-like family LPH45_09665 PF09115 DNA polymerase III, delta subunit, C terminal LPH45_09685 PF00459 Inositol monophosphatase family LPH45_09690 PF00588 SpoU rRNA Methylase family LPH45_09695 PF04055 Radical SAM superfamily LPH45_09700 PF08207 Elongation factor P (EF-P) KOW-like domain LPH45_09700 PF09285 Elongation factor P, C-terminal LPH45_09700 PF01132 Elongation factor P (EF-P) OB domain LPH45_09705 PF01979 Amidohydrolase family LPH45_09715 PF13419 Haloacid dehalogenase-like hydrolase LPH45_09730 PF00561 alpha/beta hydrolase fold LPH45_09735 PF08534 Redoxin LPH45_09765 PF00155 Aminotransferase class I and II LPH45_09770 PF00795 Carbon-nitrogen hydrolase LPH45_09780 PF00849 RNA pseudouridylate synthase LPH45_09780 PF01479 S4 domain LPH45_09785 PF04079 Segregation and condensation complex subunit ScpB LPH45_09790 PF02616 Segregation and condensation protein ScpA LPH45_09820 PF00528 Binding-protein-dependent transport system inner membrane component LPH45_09825 PF00528 Binding-protein-dependent transport system inner membrane component LPH45_09840 PF00795 Carbon-nitrogen hydrolase LPH45_09845 PF04371 Porphyromonas-type peptidyl-arginine deiminase LPH45_09855 PF00444 Ribosomal protein L36 LPH45_09860 PF02224 Cytidylate kinase LPH45_09865 PF00575 S1 RNA binding domain LPH45_09870 PF00216 Bacterial DNA-binding protein LPH45_09880 PF18073 Rubredoxin metal binding domain LPH45_09885 PF00953 Glycosyl transferase family 4 LPH45_09890 PF02719 Polysaccharide biosynthesis protein LPH45_09895 PF00483 Nucleotidyl transferase LPH45_09900 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LPH45_09900 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LPH45_09905 PF00478 IMP dehydrogenase / GMP reductase domain LPH45_09905 PF00571 CBS domain LPH45_09910 PF02540 NAD synthase LPH45_09910 PF00958 GMP synthase C terminal domain LPH45_09910 PF00117 Glutamine amidotransferase class-I LPH45_09960 PF09571 XcyI restriction endonuclease LPH45_09975 PF17760 UvrA interaction domain LPH45_09975 PF17755 UvrA DNA-binding domain LPH45_09975 PF00005 ABC transporter LPH45_09980 PF00829 Ribosomal prokaryotic L21 protein LPH45_09985 PF01016 Ribosomal L27 protein LPH45_09990 PF01018 GTP1/OBG LPH45_09990 PF01926 50S ribosome-binding GTPase LPH45_09995 PF01649 Ribosomal protein S20 LPH45_10000 PF03023 Lipid II flippase MurJ LPH45_10005 PF01687 Riboflavin kinase LPH45_10005 PF06574 FAD synthetase LPH45_10010 PF06827 Zinc finger found in FPG and IleRS LPH45_10010 PF00133 tRNA synthetases class I (I, L, M and V) LPH45_10010 PF08264 Anticodon-binding domain of tRNA LPH45_10015 PF01252 Signal peptidase (SPase) II LPH45_10020 PF02401 LytB protein LPH45_10090 PF13091 PLD-like domain LPH45_10090 PF13087 AAA domain LPH45_10095 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH45_10095 PF06594 Haemolysin-type calcium binding protein related domain LPH45_10160 PF03412 Peptidase C39 family LPH45_10160 PF00005 ABC transporter LPH45_10160 PF00664 ABC transporter transmembrane region LPH45_10165 PF00155 Aminotransferase class I and II LPH45_10170 PF01522 Polysaccharide deacetylase LPH45_10175 PF00462 Glutaredoxin LPH45_10190 PF03466 LysR substrate binding domain LPH45_10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH45_10200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPH45_10210 PF00857 Isochorismatase family LPH45_10220 PF00107 Zinc-binding dehydrogenase LPH45_10220 PF08240 Alcohol dehydrogenase GroES-like domain LPH45_10225 PF00107 Zinc-binding dehydrogenase LPH45_10225 PF08240 Alcohol dehydrogenase GroES-like domain LPH45_10245 PF00873 AcrB/AcrD/AcrF family LPH45_10250 PF00873 AcrB/AcrD/AcrF family LPH45_10255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH45_10260 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LPH45_10260 PF14489 QueF-like protein LPH45_10275 PF00330 Aconitase family (aconitate hydratase) LPH45_10280 PF00694 Aconitase C-terminal domain LPH45_10285 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH45_10300 PF02397 Bacterial sugar transferase LPH45_10315 PF13439 Glycosyltransferase Family 4 LPH45_10315 PF00534 Glycosyl transferases group 1 LPH45_10325 PF01943 Polysaccharide biosynthesis protein LPH45_10340 PF00486 Transcriptional regulatory protein, C terminal LPH45_10340 PF00072 Response regulator receiver domain LPH45_10345 PF05958 tRNA (Uracil-5-)-methyltransferase LPH45_10350 PF01928 CYTH domain LPH45_10355 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH45_10360 PF00156 Phosphoribosyl transferase domain LPH45_10365 PF01048 Phosphorylase superfamily LPH45_10370 PF00313 'Cold-shock' DNA-binding domain LPH45_10380 PF01668 SmpB protein LPH45_10390 PF03658 RnfH family Ubiquitin LPH45_10395 PF04355 SmpA / OmlA family LPH45_10400 PF01475 Ferric uptake regulator family LPH45_10405 PF02463 RecF/RecN/SMC N terminal domain LPH45_10410 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LPH45_10410 PF01628 HrcA protein C terminal domain LPH45_10415 PF01025 GrpE LPH45_10420 PF00012 Hsp70 protein LPH45_10425 PF00226 DnaJ domain LPH45_10425 PF01556 DnaJ C terminal domain LPH45_10425 PF00684 DnaJ central domain LPH45_10435 PF00486 Transcriptional regulatory protein, C terminal LPH45_10435 PF00072 Response regulator receiver domain LPH45_10440 PF01219 Prokaryotic diacylglycerol kinase LPH45_10445 PF01790 Prolipoprotein diacylglyceryl transferase LPH45_10450 PF00303 Thymidylate synthase LPH45_10455 PF00186 Dihydrofolate reductase LPH45_10460 PF13700 Domain of unknown function (DUF4158) LPH45_10460 PF01526 Tn3 transposase DDE domain LPH45_10470 PF00486 Transcriptional regulatory protein, C terminal LPH45_10470 PF00072 Response regulator receiver domain LPH45_10475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH45_10475 PF02702 Osmosensitive K+ channel His kinase sensor domain LPH45_10475 PF00512 His Kinase A (phospho-acceptor) domain LPH45_10475 PF13492 GAF domain LPH45_10475 PF13493 Domain of unknown function (DUF4118) LPH45_10480 PF02669 K+-transporting ATPase, c chain LPH45_10490 PF03814 Potassium-transporting ATPase A subunit LPH45_10505 PF00149 Calcineurin-like phosphoesterase LPH45_10510 PF04379 ApaG domain LPH45_10515 PF00398 Ribosomal RNA adenine dimethylase LPH45_10520 PF00929 Exonuclease LPH45_10525 PF01895 PhoU domain LPH45_10530 PF00005 ABC transporter LPH45_10535 PF00528 Binding-protein-dependent transport system inner membrane component LPH45_10540 PF00528 Binding-protein-dependent transport system inner membrane component LPH45_10545 PF12849 PBP superfamily domain LPH45_10550 PF02254 TrkA-N domain LPH45_10550 PF00999 Sodium/hydrogen exchanger family LPH45_10555 PF00593 TonB dependent receptor LPH45_10555 PF07715 TonB-dependent Receptor Plug Domain LPH45_10560 PF01323 DSBA-like thioredoxin domain LPH45_10570 PF12848 ABC transporter LPH45_10570 PF00005 ABC transporter LPH45_10585 PF01066 CDP-alcohol phosphatidyltransferase LPH45_10590 PF01541 GIY-YIG catalytic domain LPH45_10590 PF02151 UvrB/uvrC motif LPH45_10590 PF08459 UvrC Helix-hairpin-helix N-terminal LPH45_10595 PF01451 Low molecular weight phosphotyrosine protein phosphatase LPH45_10600 PF02348 Cytidylyltransferase LPH45_10605 PF10609 NUBPL iron-transfer P-loop NTPase LPH45_10610 PF00202 Aminotransferase class-III LPH45_10620 PF00490 Delta-aminolevulinic acid dehydratase LPH45_10630 PF12146 Serine aminopeptidase, S33 LPH45_10645 PF13932 GidA associated domain LPH45_10645 PF01134 Glucose inhibited division protein A LPH45_10665 PF13649 Methyltransferase domain LPH45_10685 PF02649 Type I GTP cyclohydrolase folE2 LPH45_10690 PF00132 Bacterial transferase hexapeptide (six repeats) LPH45_10695 PF00873 AcrB/AcrD/AcrF family LPH45_10700 PF00529 HlyD membrane-fusion protein of T1SS LPH45_10700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH45_10705 PF05088 Bacterial NAD-glutamate dehydrogenase LPH45_10710 PF01513 ATP-NAD kinase LPH45_10730 PF12706 Beta-lactamase superfamily domain LPH45_10740 PF00929 Exonuclease LPH45_10740 PF08411 Exonuclease C-terminal LPH45_10755 PF00999 Sodium/hydrogen exchanger family LPH45_10765 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LPH45_10775 PF01812 5-formyltetrahydrofolate cyclo-ligase family LPH45_10795 PF03695 Uncharacterised protein family (UPF0149) LPH45_10800 PF00557 Metallopeptidase family M24 LPH45_10800 PF05195 Aminopeptidase P, N-terminal domain LPH45_10805 PF00293 NUDIX domain LPH45_10840 PF01063 Amino-transferase class IV LPH45_10855 PF02954 Bacterial regulatory protein, Fis family LPH45_10865 PF01381 Helix-turn-helix LPH45_10880 PF00535 Glycosyl transferase family 2 LPH45_10890 PF00925 GTP cyclohydrolase II LPH45_10900 PF08534 Redoxin LPH45_10925 PF00959 Phage lysozyme LPH45_10945 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH45_10945 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH45_10945 PF00476 DNA polymerase family A LPH45_10945 PF01612 3'-5' exonuclease LPH45_10970 PF07963 Prokaryotic N-terminal methylation motif LPH45_10970 PF00114 Pilin (bacterial filament) LPH45_10985 PF16123 Hydroxyacylglutathione hydrolase C-terminus LPH45_10985 PF00753 Metallo-beta-lactamase superfamily LPH45_10995 PF00075 RNase H LPH45_11000 PF00929 Exonuclease LPH45_11020 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LPH45_11030 PF13632 Glycosyl transferase family group 2 LPH45_11035 PF02230 Phospholipase/Carboxylesterase LPH45_11040 PF06580 Histidine kinase LPH45_11040 PF07694 5TMR of 5TMR-LYT LPH45_11045 PF00072 Response regulator receiver domain LPH45_11045 PF04397 LytTr DNA-binding domain LPH45_11050 PF03900 Porphobilinogen deaminase, C-terminal domain LPH45_11050 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LPH45_11070 PF00437 Type II/IV secretion system protein LPH45_11075 PF00437 Type II/IV secretion system protein LPH45_11090 PF00535 Glycosyl transferase family 2 LPH45_11100 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH45_11100 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH45_11115 PF09924 Uncharacterised conserved protein (DUF2156) LPH45_11115 PF03706 Lysylphosphatidylglycerol synthase TM region LPH45_11120 PF01042 Endoribonuclease L-PSP LPH45_11135 PF01430 Hsp33 protein LPH45_11140 PF00912 Transglycosylase LPH45_11145 PF05192 MutS domain III LPH45_11145 PF05190 MutS family domain IV LPH45_11145 PF00488 MutS domain V LPH45_11145 PF05188 MutS domain II LPH45_11145 PF01624 MutS domain I LPH45_11150 PF01168 Alanine racemase, N-terminal domain LPH45_11165 PF02237 Biotin protein ligase C terminal domain LPH45_11165 PF08279 HTH domain LPH45_11165 PF03099 Biotin/lipoate A/B protein ligase family LPH45_11170 PF03309 Type III pantothenate kinase LPH45_11200 PF01183 Glycosyl hydrolases family 25 LPH45_11220 PF01381 Helix-turn-helix LPH45_11230 PF07963 Prokaryotic N-terminal methylation motif LPH45_11230 PF00114 Pilin (bacterial filament) LPH45_11330 PF00589 Phage integrase family LPH45_11345 PF00959 Phage lysozyme LPH45_11360 PF00574 Clp protease LPH45_11400 PF01022 Bacterial regulatory protein, arsR family LPH45_11415 PF00873 AcrB/AcrD/AcrF family LPH45_11440 PF00581 Rhodanese-like domain LPH45_11445 PF02556 Preprotein translocase subunit SecB LPH45_11450 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LPH45_11450 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LPH45_11480 PF12169 DNA polymerase III subunits gamma and tau domain III LPH45_11480 PF12170 DNA polymerase III tau subunit V interacting with alpha LPH45_11485 PF02575 YbaB/EbfC DNA-binding family LPH45_11490 PF02132 RecR protein LPH45_11490 PF13662 Toprim domain LPH45_11495 PF01230 HIT domain LPH45_11505 PF11992 Domain of unknown function (DUF3488) LPH45_11505 PF13559 Domain of unknown function (DUF4129) LPH45_11505 PF01841 Transglutaminase-like superfamily LPH45_11515 PF07726 ATPase family associated with various cellular activities (AAA) LPH45_11515 PF17863 AAA lid domain LPH45_11525 PF02620 Large ribosomal RNA subunit accumulation protein YceD LPH45_11530 PF01783 Ribosomal L32p protein family LPH45_11535 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH45_11535 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH45_11550 PF00553 Cellulose binding domain LPH45_11550 PF00041 Fibronectin type III domain LPH45_11550 PF01341 Glycosyl hydrolases family 6 LPH45_11555 PF08502 LeuA allosteric (dimerisation) domain LPH45_11555 PF00682 HMGL-like LPH45_11560 PF00291 Pyridoxal-phosphate dependent enzyme LPH45_11570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPH45_11570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPH45_11570 PF00205 Thiamine pyrophosphate enzyme, central domain LPH45_11575 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LPH45_11575 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LPH45_11580 PF11818 C-terminal domain of tail specific protease (DUF3340) LPH45_11580 PF00595 PDZ domain LPH45_11580 PF03572 Peptidase family S41 LPH45_11580 PF17804 Tail specific protease N-terminal domain LPH45_11585 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LPH45_11590 PF02566 OsmC-like protein LPH45_11595 PF03969 AFG1-like ATPase LPH45_11600 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH45_11605 PF02492 CobW/HypB/UreG, nucleotide-binding domain LPH45_11605 PF07683 Cobalamin synthesis protein cobW C-terminal domain LPH45_11615 PF00551 Formyl transferase LPH45_11625 PF03109 ABC1 family LPH45_11635 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LPH45_11635 PF12241 Trans-2-enoyl-CoA reductase catalytic region LPH45_11635 PF07055 Enoyl reductase FAD binding domain LPH45_11655 PF00881 Nitroreductase family LPH45_11660 PF04264 YceI-like domain LPH45_11665 PF02673 Bacitracin resistance protein BacA LPH45_11670 PF00120 Glutamine synthetase, catalytic domain LPH45_11670 PF03951 Glutamine synthetase, beta-Grasp domain LPH45_11675 PF00543 Nitrogen regulatory protein P-II LPH45_11680 PF00909 Ammonium Transporter Family LPH45_11695 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LPH45_11695 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LPH45_11700 PF00890 FAD binding domain LPH45_11700 PF02910 Fumarate reductase flavoprotein C-term LPH45_11705 PF02445 Quinolinate synthetase A protein LPH45_11710 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH45_11710 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH45_11715 PF01026 TatD related DNase LPH45_11800 PF01850 PIN domain LPH45_11825 PF02881 SRP54-type protein, helical bundle domain LPH45_11825 PF00448 SRP54-type protein, GTPase domain LPH45_11830 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH45_11830 PF00633 Helix-hairpin-helix motif LPH45_11830 PF14815 NUDIX domain LPH45_11835 PF04362 Bacterial Fe(2+) trafficking LPH45_11845 PF01709 Transcriptional regulator LPH45_11850 PF02075 Crossover junction endodeoxyribonuclease RuvC LPH45_11855 PF07499 RuvA, C-terminal domain LPH45_11855 PF01330 RuvA N terminal domain LPH45_11860 PF02705 K+ potassium transporter LPH45_11865 PF17864 RuvB AAA lid domain LPH45_11865 PF05491 RuvB C-terminal winged helix domain LPH45_11865 PF05496 Holliday junction DNA helicase RuvB P-loop domain LPH45_11870 PF03061 Thioesterase superfamily LPH45_11875 PF01618 MotA/TolQ/ExbB proton channel family LPH45_11880 PF02472 Biopolymer transport protein ExbD/TolR LPH45_11890 PF04052 TolB amino-terminal domain LPH45_11890 PF07676 WD40-like Beta Propeller Repeat LPH45_11895 PF00691 OmpA family LPH45_11905 PF04055 Radical SAM superfamily LPH45_11910 PF00300 Histidine phosphatase superfamily (branch 1) LPH45_11915 PF04493 Endonuclease V LPH45_11920 PF00854 POT family LPH45_11925 PF00255 Glutathione peroxidase LPH45_11930 PF00970 Oxidoreductase FAD-binding domain LPH45_11930 PF00175 Oxidoreductase NAD-binding domain LPH45_11935 PF13667 ThiC-associated domain LPH45_11935 PF01964 Radical SAM ThiC family LPH45_11940 PF10459 Peptidase S46 LPH45_11950 PF14850 DNA-binding domain of Proline dehydrogenase LPH45_11950 PF00171 Aldehyde dehydrogenase family LPH45_11950 PF01619 Proline dehydrogenase LPH45_11950 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LPH45_11985 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LPH45_12005 PF04335 VirB8 protein LPH45_12015 PF03743 Bacterial conjugation TrbI-like protein LPH45_12020 PF00437 Type II/IV secretion system protein LPH45_12025 PF02534 Type IV secretory system Conjugative DNA transfer LPH45_12085 PF02796 Helix-turn-helix domain of resolvase LPH45_12085 PF00239 Resolvase, N terminal domain LPH45_12125 PF07282 Putative transposase DNA-binding domain LPH45_12125 PF12323 Helix-turn-helix domain LPH45_12125 PF01385 Probable transposase LPH45_12140 PF08681 Protein of unknown function (DUF1778)