locus-tag class description LPH44_00005 PF00308 Bacterial dnaA protein LPH44_00005 PF08299 Bacterial dnaA protein helix-turn-helix LPH44_00005 PF11638 DnaA N-terminal domain LPH44_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LPH44_00010 PF02767 DNA polymerase III beta subunit, central domain LPH44_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LPH44_00015 PF02463 RecF/RecN/SMC N terminal domain LPH44_00020 PF00204 DNA gyrase B LPH44_00020 PF00986 DNA gyrase B subunit, carboxyl terminus LPH44_00020 PF18053 DNA gyrase B subunit insert domain LPH44_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_00020 PF01751 Toprim domain LPH44_00030 PF01435 Peptidase family M48 LPH44_00040 PF03544 Gram-negative bacterial TonB protein C-terminal LPH44_00045 PF01618 MotA/TolQ/ExbB proton channel family LPH44_00050 PF02472 Biopolymer transport protein ExbD/TolR LPH44_00055 PF02472 Biopolymer transport protein ExbD/TolR LPH44_00075 PF01218 Coproporphyrinogen III oxidase LPH44_00100 PF00793 DAHP synthetase I family LPH44_00105 PF07963 Prokaryotic N-terminal methylation motif LPH44_00105 PF00114 Pilin (bacterial filament) LPH44_00125 PF05567 Neisseria PilC beta-propeller domain LPH44_00130 PF07963 Prokaryotic N-terminal methylation motif LPH44_00130 PF00114 Pilin (bacterial filament) LPH44_00135 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LPH44_00140 PF00155 Aminotransferase class I and II LPH44_00145 PF01741 Large-conductance mechanosensitive channel, MscL LPH44_00170 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LPH44_00180 PF02559 CarD-like/TRCF domain LPH44_00180 PF03461 TRCF domain LPH44_00180 PF17757 UvrB interaction domain LPH44_00180 PF00271 Helicase conserved C-terminal domain LPH44_00180 PF00270 DEAD/DEAH box helicase LPH44_00185 PF01220 Dehydroquinase class II LPH44_00190 PF00364 Biotin-requiring enzyme LPH44_00195 PF02785 Biotin carboxylase C-terminal domain LPH44_00195 PF00289 Biotin carboxylase, N-terminal domain LPH44_00195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH44_00200 PF13361 UvrD-like helicase C-terminal domain LPH44_00200 PF00580 UvrD/REP helicase N-terminal domain LPH44_00210 PF00970 Oxidoreductase FAD-binding domain LPH44_00210 PF00042 Globin LPH44_00210 PF00175 Oxidoreductase NAD-binding domain LPH44_00220 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LPH44_00230 PF02195 ParB-like nuclease domain LPH44_00230 PF06613 KorB C-terminal beta-barrel domain LPH44_00230 PF08535 KorB domain LPH44_00245 PF04055 Radical SAM superfamily LPH44_00245 PF06968 Biotin and Thiamin Synthesis associated domain LPH44_00250 PF01734 Patatin-like phospholipase LPH44_00255 PF01040 UbiA prenyltransferase family LPH44_00270 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LPH44_00305 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH44_00305 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH44_00315 PF00448 SRP54-type protein, GTPase domain LPH44_00315 PF02881 SRP54-type protein, helical bundle domain LPH44_00315 PF02978 Signal peptide binding domain LPH44_00335 PF13953 PapC C-terminal domain LPH44_00335 PF13954 PapC N-terminal domain LPH44_00335 PF00577 Outer membrane usher protein LPH44_00340 PF02753 Pili assembly chaperone PapD, C-terminal domain LPH44_00340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LPH44_00345 PF16970 Type-1 fimbrial protein, A LPH44_00350 PF02464 Competence-damaged protein LPH44_00355 PF00083 Sugar (and other) transporter LPH44_00360 PF01926 50S ribosome-binding GTPase LPH44_00360 PF13167 GTP-binding GTPase N-terminal LPH44_00360 PF16360 GTP-binding GTPase Middle Region LPH44_00365 PF17209 Hfq protein LPH44_00375 PF00809 Pterin binding enzyme LPH44_00380 PF17862 AAA+ lid domain LPH44_00380 PF01434 Peptidase family M41 LPH44_00380 PF00004 ATPase family associated with various cellular activities (AAA) LPH44_00380 PF06480 FtsH Extracellular LPH44_00385 PF01728 FtsJ-like methyltransferase LPH44_00390 PF01985 CRS1 / YhbY (CRM) domain LPH44_00405 PF00920 Dehydratase family LPH44_00435 PF03279 Bacterial lipid A biosynthesis acyltransferase LPH44_00440 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LPH44_00460 PF00886 Ribosomal protein S16 LPH44_00465 PF05239 PRC-barrel domain LPH44_00465 PF01782 RimM N-terminal domain LPH44_00470 PF01746 tRNA (Guanine-1)-methyltransferase LPH44_00475 PF01245 Ribosomal protein L19 LPH44_00480 PF00557 Metallopeptidase family M24 LPH44_00490 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LPH44_00490 PF14602 Hexapeptide repeat of succinyl-transferase LPH44_00490 PF00132 Bacterial transferase hexapeptide (six repeats) LPH44_00495 PF03960 ArsC family LPH44_00500 PF01546 Peptidase family M20/M25/M40 LPH44_00500 PF07687 Peptidase dimerisation domain LPH44_00505 PF00733 Asparagine synthase LPH44_00505 PF13537 Glutamine amidotransferase domain LPH44_00520 PF03060 Nitronate monooxygenase LPH44_00530 PF00717 Peptidase S24-like LPH44_00530 PF01726 LexA DNA binding domain LPH44_00535 PF00154 recA bacterial DNA recombination protein LPH44_00540 PF02272 DHHA1 domain LPH44_00540 PF01411 tRNA synthetases class II (A) LPH44_00540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH44_00545 PF02599 Global regulator protein family LPH44_00555 PF01432 Peptidase family M3 LPH44_00570 PF07731 Multicopper oxidase LPH44_00570 PF00394 Multicopper oxidase LPH44_00570 PF07732 Multicopper oxidase LPH44_00575 PF05275 Copper resistance protein B precursor (CopB) LPH44_00580 PF10458 Valyl tRNA synthetase tRNA binding arm LPH44_00580 PF00133 tRNA synthetases class I (I, L, M and V) LPH44_00580 PF08264 Anticodon-binding domain of tRNA LPH44_00600 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH44_00600 PF00883 Cytosol aminopeptidase family, catalytic domain LPH44_00620 PF01380 SIS domain LPH44_00635 PF17284 Spermidine synthase tetramerisation domain LPH44_00640 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LPH44_00640 PF17810 Arginine decarboxylase helical bundle domain LPH44_00640 PF17944 Arginine decarboxylase C-terminal helical extension LPH44_00645 PF00106 short chain dehydrogenase LPH44_00655 PF00750 tRNA synthetases class I (R) LPH44_00655 PF05746 DALR anticodon binding domain LPH44_00655 PF03485 Arginyl tRNA synthetase N terminal domain LPH44_00660 PF04002 RadC-like JAB domain LPH44_00665 PF04127 DNA / pantothenate metabolism flavoprotein LPH44_00665 PF02441 Flavoprotein LPH44_00670 PF00692 dUTPase LPH44_00675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH44_00675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH44_00675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH44_00675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH44_00685 PF00156 Phosphoribosyl transferase domain LPH44_00730 PF07690 Major Facilitator Superfamily LPH44_00735 PF03702 Anhydro-N-acetylmuramic acid kinase LPH44_00740 PF04225 Opacity-associated protein A LysM-like domain LPH44_00740 PF01551 Peptidase family M23 LPH44_00745 PF00579 tRNA synthetases class I (W and Y) LPH44_00775 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH44_00775 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH44_00805 PF00009 Elongation factor Tu GTP binding domain LPH44_00805 PF16658 Class II release factor RF3, C-terminal domain LPH44_00810 PF03006 Haemolysin-III related LPH44_00815 PF00535 Glycosyl transferase family 2 LPH44_00820 PF01026 TatD related DNase LPH44_00835 PF01597 Glycine cleavage H-protein LPH44_00840 PF08669 Glycine cleavage T-protein C-terminal barrel domain LPH44_00840 PF01571 Aminomethyltransferase folate-binding domain LPH44_00850 PF01145 SPFH domain / Band 7 family LPH44_00850 PF16200 C-terminal region of band_7 LPH44_00855 PF03819 MazG nucleotide pyrophosphohydrolase domain LPH44_00860 PF00459 Inositol monophosphatase family LPH44_00865 PF00293 NUDIX domain LPH44_00870 PF00202 Aminotransferase class-III LPH44_00875 PF04452 RNA methyltransferase LPH44_00885 PF00270 DEAD/DEAH box helicase LPH44_00885 PF00271 Helicase conserved C-terminal domain LPH44_00890 PF01242 6-pyruvoyl tetrahydropterin synthase LPH44_00915 PF03653 Uncharacterised protein family (UPF0093) LPH44_00920 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LPH44_00925 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LPH44_00925 PF01336 OB-fold nucleic acid binding domain LPH44_00925 PF07733 Bacterial DNA polymerase III alpha NTPase domain LPH44_00925 PF02811 PHP domain LPH44_00925 PF14579 Helix-hairpin-helix motif LPH44_00930 PF01259 SAICAR synthetase LPH44_00935 PF00226 DnaJ domain LPH44_00935 PF05099 Tellurite resistance protein TerB LPH44_00940 PF00834 Ribulose-phosphate 3 epimerase family LPH44_00950 PF00425 chorismate binding enzyme LPH44_00950 PF04715 Anthranilate synthase component I, N terminal region LPH44_00955 PF00117 Glutamine amidotransferase class-I LPH44_00960 PF02885 Glycosyl transferase family, helical bundle domain LPH44_00960 PF00591 Glycosyl transferase family, a/b domain LPH44_00965 PF00218 Indole-3-glycerol phosphate synthase LPH44_00980 PF12849 PBP superfamily domain LPH44_01000 PF01321 Creatinase/Prolidase N-terminal domain LPH44_01000 PF00557 Metallopeptidase family M24 LPH44_01015 PF01702 Queuine tRNA-ribosyltransferase LPH44_01020 PF02699 Preprotein translocase subunit LPH44_01025 PF07549 SecD/SecF GG Motif LPH44_01025 PF13721 SecD export protein N-terminal TM region LPH44_01025 PF02355 Protein export membrane protein LPH44_01030 PF02355 Protein export membrane protein LPH44_01030 PF07549 SecD/SecF GG Motif LPH44_01040 PF01743 Poly A polymerase head domain LPH44_01040 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH44_01040 PF12626 Polymerase A arginine-rich C-terminus LPH44_01045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LPH44_01050 PF02548 Ketopantoate hydroxymethyltransferase LPH44_01055 PF02569 Pantoate-beta-alanine ligase LPH44_01060 PF02261 Aspartate decarboxylase LPH44_01065 PF00342 Phosphoglucose isomerase LPH44_01075 PF02576 RimP N-terminal domain LPH44_01075 PF17384 RimP C-terminal SH3 domain LPH44_01080 PF13184 NusA-like KH domain LPH44_01080 PF08529 NusA N-terminal domain LPH44_01080 PF00575 S1 RNA binding domain LPH44_01085 PF11987 Translation-initiation factor 2 LPH44_01085 PF04760 Translation initiation factor IF-2, N-terminal region LPH44_01085 PF00009 Elongation factor Tu GTP binding domain LPH44_01085 PF08364 Bacterial translation initiation factor IF-2 associated region LPH44_01090 PF02033 Ribosome-binding factor A LPH44_01095 PF09157 Pseudouridine synthase II TruB, C-terminal LPH44_01095 PF16198 tRNA pseudouridylate synthase B C-terminal domain LPH44_01095 PF01509 TruB family pseudouridylate synthase (N terminal domain) LPH44_01100 PF00312 Ribosomal protein S15 LPH44_01105 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LPH44_01105 PF01138 3' exoribonuclease family, domain 1 LPH44_01105 PF00575 S1 RNA binding domain LPH44_01105 PF00013 KH domain LPH44_01105 PF03725 3' exoribonuclease family, domain 2 LPH44_01110 PF01638 HxlR-like helix-turn-helix LPH44_01115 PF05368 NmrA-like family LPH44_01120 PF00873 AcrB/AcrD/AcrF family LPH44_01130 PF00999 Sodium/hydrogen exchanger family LPH44_01150 PF03880 DbpA RNA binding domain LPH44_01150 PF00270 DEAD/DEAH box helicase LPH44_01150 PF00271 Helicase conserved C-terminal domain LPH44_01155 PF00766 Electron transfer flavoprotein FAD-binding domain LPH44_01155 PF01012 Electron transfer flavoprotein domain LPH44_01160 PF01012 Electron transfer flavoprotein domain LPH44_01165 PF16363 GDP-mannose 4,6 dehydratase LPH44_01170 PF00483 Nucleotidyl transferase LPH44_01175 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LPH44_01180 PF04321 RmlD substrate binding domain LPH44_01185 PF01050 Mannose-6-phosphate isomerase LPH44_01185 PF00483 Nucleotidyl transferase LPH44_01190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH44_01190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH44_01190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH44_01190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH44_01235 PF00082 Subtilase family LPH44_01235 PF03797 Autotransporter beta-domain LPH44_01235 PF12951 Passenger-associated-transport-repeat LPH44_01240 PF03797 Autotransporter beta-domain LPH44_01240 PF12951 Passenger-associated-transport-repeat LPH44_01240 PF00082 Subtilase family LPH44_01245 PF06779 Uncharacterised MFS-type transporter YbfB LPH44_01250 PF07669 Eco57I restriction-modification methylase LPH44_01260 PF00365 Phosphofructokinase LPH44_01270 PF01225 Mur ligase family, catalytic domain LPH44_01270 PF08245 Mur ligase middle domain LPH44_01270 PF02875 Mur ligase family, glutamate ligase domain LPH44_01275 PF01569 PAP2 superfamily LPH44_01300 PF00892 EamA-like transporter family LPH44_01305 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH44_01305 PF00883 Cytosol aminopeptidase family, catalytic domain LPH44_01315 PF01594 AI-2E family transporter LPH44_01335 PF00595 PDZ domain LPH44_01340 PF08338 Domain of unknown function (DUF1731) LPH44_01340 PF01370 NAD dependent epimerase/dehydratase family LPH44_01345 PF00501 AMP-binding enzyme LPH44_01345 PF13193 AMP-binding enzyme C-terminal domain LPH44_01350 PF00694 Aconitase C-terminal domain LPH44_01350 PF00330 Aconitase family (aconitate hydratase) LPH44_01365 PF00330 Aconitase family (aconitate hydratase) LPH44_01365 PF06434 Aconitate hydratase 2 N-terminus LPH44_01365 PF11791 Aconitate B N-terminal domain LPH44_01380 PF02384 N-6 DNA Methylase LPH44_01385 PF01420 Type I restriction modification DNA specificity domain LPH44_01400 PF18766 SWI2/SNF2 ATPase LPH44_01400 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH44_01400 PF11867 Domain of unknown function (DUF3387) LPH44_01420 PF00121 Triosephosphate isomerase LPH44_01435 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LPH44_01440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LPH44_01445 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LPH44_01450 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LPH44_01460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LPH44_01460 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LPH44_01460 PF10531 SLBB domain LPH44_01465 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LPH44_01465 PF00384 Molybdopterin oxidoreductase LPH44_01465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LPH44_01470 PF00146 NADH dehydrogenase LPH44_01475 PF12838 4Fe-4S dicluster domain LPH44_01480 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LPH44_01485 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPH44_01490 PF00361 Proton-conducting membrane transporter LPH44_01490 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPH44_01495 PF00361 Proton-conducting membrane transporter LPH44_01495 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LPH44_01500 PF00361 Proton-conducting membrane transporter LPH44_01505 PF00106 short chain dehydrogenase LPH44_01510 PF03600 Citrate transporter LPH44_01520 PF00486 Transcriptional regulatory protein, C terminal LPH44_01520 PF00072 Response regulator receiver domain LPH44_01525 PF08521 Two-component sensor kinase N-terminal LPH44_01525 PF00512 His Kinase A (phospho-acceptor) domain LPH44_01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_01535 PF00196 Bacterial regulatory proteins, luxR family LPH44_01535 PF00072 Response regulator receiver domain LPH44_01540 PF01627 Hpt domain LPH44_01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_01540 PF00672 HAMP domain LPH44_01540 PF00072 Response regulator receiver domain LPH44_01540 PF00512 His Kinase A (phospho-acceptor) domain LPH44_01550 PF00375 Sodium:dicarboxylate symporter family LPH44_01555 PF00390 Malic enzyme, N-terminal domain LPH44_01555 PF03949 Malic enzyme, NAD binding domain LPH44_01555 PF01515 Phosphate acetyl/butaryl transferase LPH44_01560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_01560 PF00183 Hsp90 protein LPH44_01570 PF01467 Cytidylyltransferase-like LPH44_01580 PF00037 4Fe-4S binding domain LPH44_01590 PF00990 Diguanylate cyclase, GGDEF domain LPH44_01595 PF01476 LysM domain LPH44_01595 PF01551 Peptidase family M23 LPH44_01600 PF01979 Amidohydrolase family LPH44_01605 PF01809 Putative membrane protein insertion efficiency factor LPH44_01610 PF01258 Prokaryotic dksA/traR C4-type zinc finger LPH44_01640 PF02657 Fe-S metabolism associated domain LPH44_01645 PF01406 tRNA synthetases class I (C) catalytic domain LPH44_01645 PF09190 DALR domain LPH44_01655 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH44_01655 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH44_01660 PF00764 Arginosuccinate synthase LPH44_01665 PF07687 Peptidase dimerisation domain LPH44_01665 PF01546 Peptidase family M20/M25/M40 LPH44_01670 PF00696 Amino acid kinase family LPH44_01670 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LPH44_01680 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH44_01685 PF00206 Lyase LPH44_01695 PF00696 Amino acid kinase family LPH44_01695 PF01472 PUA domain LPH44_01700 PF00171 Aldehyde dehydrogenase family LPH44_01710 PF00239 Resolvase, N terminal domain LPH44_01710 PF02796 Helix-turn-helix domain of resolvase LPH44_01735 PF00239 Resolvase, N terminal domain LPH44_01735 PF02796 Helix-turn-helix domain of resolvase LPH44_01750 PF13700 Domain of unknown function (DUF4158) LPH44_01750 PF01526 Tn3 transposase DDE domain LPH44_01780 PF03524 Conjugal transfer protein LPH44_01820 PF01593 Flavin containing amine oxidoreductase LPH44_01830 PF02627 Carboxymuconolactone decarboxylase family LPH44_01850 PF03466 LysR substrate binding domain LPH44_01850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH44_01855 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LPH44_01860 PF09386 Antitoxin ParD LPH44_01865 PF02796 Helix-turn-helix domain of resolvase LPH44_01865 PF00239 Resolvase, N terminal domain LPH44_01890 PF02796 Helix-turn-helix domain of resolvase LPH44_01890 PF00239 Resolvase, N terminal domain LPH44_01930 PF06594 Haemolysin-type calcium binding protein related domain LPH44_01930 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH44_01935 PF14437 MafB19-like deaminase LPH44_01940 PF02742 Iron dependent repressor, metal binding and dimerisation domain LPH44_01940 PF01325 Iron dependent repressor, N-terminal DNA binding domain LPH44_01945 PF01566 Natural resistance-associated macrophage protein LPH44_01960 PF04376 Arginine-tRNA-protein transferase, N terminus LPH44_01960 PF04377 Arginine-tRNA-protein transferase, C terminus LPH44_01995 PF12951 Passenger-associated-transport-repeat LPH44_01995 PF00082 Subtilase family LPH44_01995 PF03797 Autotransporter beta-domain LPH44_02025 PF01553 Acyltransferase LPH44_02040 PF05221 S-adenosyl-L-homocysteine hydrolase LPH44_02040 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LPH44_02055 PF01351 Ribonuclease HII LPH44_02060 PF02684 Lipid-A-disaccharide synthetase LPH44_02065 PF00132 Bacterial transferase hexapeptide (six repeats) LPH44_02065 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LPH44_02070 PF07977 FabA-like domain LPH44_02075 PF00132 Bacterial transferase hexapeptide (six repeats) LPH44_02075 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LPH44_02080 PF07244 Surface antigen variable number repeat LPH44_02080 PF01103 Surface antigen LPH44_02085 PF02163 Peptidase family M50 LPH44_02085 PF17820 PDZ domain LPH44_02090 PF13288 DXP reductoisomerase C-terminal domain LPH44_02090 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LPH44_02090 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LPH44_02100 PF01255 Putative undecaprenyl diphosphate synthase LPH44_02105 PF01765 Ribosome recycling factor LPH44_02135 PF04305 Protein of unknown function (DUF455) LPH44_02140 PF00696 Amino acid kinase family LPH44_02215 PF01081 KDPG and KHG aldolase LPH44_02220 PF00920 Dehydratase family LPH44_02225 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LPH44_02230 PF02685 Glucokinase LPH44_02235 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LPH44_02235 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LPH44_02240 PF17912 MalK OB fold domain LPH44_02240 PF00005 ABC transporter LPH44_02255 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH44_02260 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH44_02265 PF02910 Fumarate reductase flavoprotein C-term LPH44_02265 PF00890 FAD binding domain LPH44_02270 PF13237 4Fe-4S dicluster domain LPH44_02270 PF13085 2Fe-2S iron-sulfur cluster binding domain LPH44_02275 PF03937 Flavinator of succinate dehydrogenase LPH44_02285 PF02687 FtsX-like permease family LPH44_02285 PF12704 MacB-like periplasmic core domain LPH44_02290 PF00005 ABC transporter LPH44_02295 PF03772 Competence protein LPH44_02295 PF00753 Metallo-beta-lactamase superfamily LPH44_02310 PF00664 ABC transporter transmembrane region LPH44_02310 PF00005 ABC transporter LPH44_02315 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LPH44_02320 PF01883 Iron-sulfur cluster assembly protein LPH44_02320 PF10609 NUBPL iron-transfer P-loop NTPase LPH44_02335 PF13091 PLD-like domain LPH44_02360 PF03358 NADPH-dependent FMN reductase LPH44_02365 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LPH44_02365 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LPH44_02380 PF01300 Telomere recombination LPH44_02385 PF13368 Topoisomerase C-terminal repeat LPH44_02385 PF01751 Toprim domain LPH44_02385 PF01131 DNA topoisomerase LPH44_02395 PF04361 Protein of unknown function (DUF494) LPH44_02400 PF02481 DNA recombination-mediator protein A LPH44_02400 PF17782 DprA winged helix domain LPH44_02410 PF01327 Polypeptide deformylase LPH44_02415 PF00551 Formyl transferase LPH44_02415 PF02911 Formyl transferase, C-terminal domain LPH44_02420 PF01029 NusB family LPH44_02420 PF01189 16S rRNA methyltransferase RsmB/F LPH44_02425 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LPH44_02440 PF07963 Prokaryotic N-terminal methylation motif LPH44_02440 PF00114 Pilin (bacterial filament) LPH44_02560 PF01612 3'-5' exonuclease LPH44_02560 PF00476 DNA polymerase family A LPH44_02560 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH44_02560 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH44_02565 PF01113 Dihydrodipicolinate reductase, N-terminus LPH44_02565 PF05173 Dihydrodipicolinate reductase, C-terminus LPH44_02570 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LPH44_02570 PF00117 Glutamine amidotransferase class-I LPH44_02575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH44_02575 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LPH44_02575 PF02142 MGS-like domain LPH44_02580 PF03449 Transcription elongation factor, N-terminal LPH44_02580 PF01272 Transcription elongation factor, GreA/GreB, C-term LPH44_02590 PF17768 RecJ OB domain LPH44_02590 PF02272 DHHA1 domain LPH44_02590 PF01368 DHH family LPH44_02600 PF01336 OB-fold nucleic acid binding domain LPH44_02600 PF00152 tRNA synthetases class II (D, K and N) LPH44_02605 PF00072 Response regulator receiver domain LPH44_02610 PF00072 Response regulator receiver domain LPH44_02610 PF01627 Hpt domain LPH44_02610 PF00512 His Kinase A (phospho-acceptor) domain LPH44_02610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_02615 PF00378 Enoyl-CoA hydratase/isomerase LPH44_02620 PF00696 Amino acid kinase family LPH44_02620 PF01842 ACT domain LPH44_02630 PF08245 Mur ligase middle domain LPH44_02650 PF00293 NUDIX domain LPH44_02660 PF02219 Methylenetetrahydrofolate reductase LPH44_02670 PF02545 Maf-like protein LPH44_02675 PF00575 S1 RNA binding domain LPH44_02675 PF10150 Ribonuclease E/G family LPH44_02685 PF01523 Putative modulator of DNA gyrase LPH44_02690 PF04751 Protein of unknown function (DUF615) LPH44_02695 PF01523 Putative modulator of DNA gyrase LPH44_02705 PF06250 YhcG PDDEXK nuclease domain LPH44_02705 PF17761 DUF1016 N-terminal domain LPH44_02730 PF03466 LysR substrate binding domain LPH44_02730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH44_02735 PF03358 NADPH-dependent FMN reductase LPH44_02745 PF00107 Zinc-binding dehydrogenase LPH44_02745 PF08240 Alcohol dehydrogenase GroES-like domain LPH44_02760 PF00248 Aldo/keto reductase family LPH44_02775 PF14602 Hexapeptide repeat of succinyl-transferase LPH44_02775 PF12804 MobA-like NTP transferase domain LPH44_02775 PF00132 Bacterial transferase hexapeptide (six repeats) LPH44_02785 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LPH44_02785 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LPH44_02790 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH44_02790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH44_02795 PF00231 ATP synthase LPH44_02800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH44_02800 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH44_02800 PF00306 ATP synthase alpha/beta chain, C terminal domain LPH44_02805 PF00213 ATP synthase delta (OSCP) subunit LPH44_02810 PF00430 ATP synthase B/B' CF(0) LPH44_02815 PF00137 ATP synthase subunit C LPH44_02820 PF00119 ATP synthase A chain LPH44_02830 PF00338 Ribosomal protein S10p/S20e LPH44_02835 PF00297 Ribosomal protein L3 LPH44_02840 PF00573 Ribosomal protein L4/L1 family LPH44_02845 PF00276 Ribosomal protein L23 LPH44_02850 PF00181 Ribosomal Proteins L2, RNA binding domain LPH44_02850 PF03947 Ribosomal Proteins L2, C-terminal domain LPH44_02855 PF00203 Ribosomal protein S19 LPH44_02860 PF00237 Ribosomal protein L22p/L17e LPH44_02865 PF00189 Ribosomal protein S3, C-terminal domain LPH44_02865 PF07650 KH domain LPH44_02870 PF00252 Ribosomal protein L16p/L10e LPH44_02875 PF00831 Ribosomal L29 protein LPH44_02880 PF00366 Ribosomal protein S17 LPH44_02885 PF00238 Ribosomal protein L14p/L23e LPH44_02890 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LPH44_02890 PF00467 KOW motif LPH44_02895 PF00281 Ribosomal protein L5 LPH44_02895 PF00673 ribosomal L5P family C-terminus LPH44_02900 PF00253 Ribosomal protein S14p/S29e LPH44_02905 PF00410 Ribosomal protein S8 LPH44_02910 PF00347 Ribosomal protein L6 LPH44_02915 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LPH44_02920 PF03719 Ribosomal protein S5, C-terminal domain LPH44_02920 PF00333 Ribosomal protein S5, N-terminal domain LPH44_02925 PF00327 Ribosomal protein L30p/L7e LPH44_02930 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LPH44_02935 PF00344 SecY translocase LPH44_02940 PF00416 Ribosomal protein S13/S18 LPH44_02945 PF00411 Ribosomal protein S11 LPH44_02950 PF00163 Ribosomal protein S4/S9 N-terminal domain LPH44_02950 PF01479 S4 domain LPH44_02955 PF01000 RNA polymerase Rpb3/RpoA insert domain LPH44_02955 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LPH44_02955 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LPH44_02960 PF01196 Ribosomal protein L17 LPH44_02965 PF04380 Membrane fusogenic activity LPH44_02970 PF01078 Magnesium chelatase, subunit ChlI LPH44_02970 PF13335 Magnesium chelatase, subunit ChlI C-terminal LPH44_02975 PF00561 alpha/beta hydrolase fold LPH44_02990 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH44_02990 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH44_02990 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH44_03005 PF05697 Bacterial trigger factor protein (TF) LPH44_03005 PF05698 Bacterial trigger factor protein (TF) C-terminus LPH44_03010 PF00574 Clp protease LPH44_03015 PF06689 ClpX C4-type zinc finger LPH44_03015 PF10431 C-terminal, D2-small domain, of ClpB protein LPH44_03015 PF07724 AAA domain (Cdc48 subfamily) LPH44_03020 PF02190 ATP-dependent protease La (LON) substrate-binding domain LPH44_03020 PF00004 ATPase family associated with various cellular activities (AAA) LPH44_03020 PF05362 Lon protease (S16) C-terminal proteolytic domain LPH44_03025 PF00216 Bacterial DNA-binding protein LPH44_03050 PF03477 ATP cone domain LPH44_03050 PF00317 Ribonucleotide reductase, all-alpha domain LPH44_03050 PF02867 Ribonucleotide reductase, barrel domain LPH44_03055 PF00268 Ribonucleotide reductase, small chain LPH44_03080 PF01479 S4 domain LPH44_03080 PF00849 RNA pseudouridylate synthase LPH44_03085 PF13419 Haloacid dehalogenase-like hydrolase LPH44_03095 PF00830 Ribosomal L28 family LPH44_03100 PF00471 Ribosomal protein L33 LPH44_03105 PF13396 Phospholipase_D-nuclease N-terminal LPH44_03105 PF13091 PLD-like domain LPH44_03120 PF00114 Pilin (bacterial filament) LPH44_03120 PF07963 Prokaryotic N-terminal methylation motif LPH44_03140 PF00476 DNA polymerase family A LPH44_03140 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH44_03140 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH44_03140 PF01612 3'-5' exonuclease LPH44_03160 PF00959 Phage lysozyme LPH44_03180 PF01555 DNA methylase LPH44_03200 PF02798 Glutathione S-transferase, N-terminal domain LPH44_03200 PF00043 Glutathione S-transferase, C-terminal domain LPH44_03205 PF00056 lactate/malate dehydrogenase, NAD binding domain LPH44_03205 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LPH44_03210 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPH44_03215 PF03144 Elongation factor Tu domain 2 LPH44_03215 PF00009 Elongation factor Tu GTP binding domain LPH44_03215 PF00679 Elongation factor G C-terminus LPH44_03230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH44_03230 PF00529 HlyD membrane-fusion protein of T1SS LPH44_03255 PF03412 Peptidase C39 family LPH44_03255 PF00005 ABC transporter LPH44_03255 PF00664 ABC transporter transmembrane region LPH44_03260 PF01061 ABC-2 type transporter LPH44_03265 PF00005 ABC transporter LPH44_03270 PF05567 Neisseria PilC beta-propeller domain LPH44_03285 PF00270 DEAD/DEAH box helicase LPH44_03285 PF00271 Helicase conserved C-terminal domain LPH44_03285 PF08482 ATP-dependent helicase C-terminal LPH44_03285 PF04408 Helicase associated domain (HA2) LPH44_03295 PF13185 GAF domain LPH44_03300 PF17243 POTRA domain TamA domain 1 LPH44_03300 PF01103 Surface antigen LPH44_03305 PF04357 TamB, inner membrane protein subunit of TAM complex LPH44_03320 PF00285 Citrate synthase, C-terminal domain LPH44_03325 PF00694 Aconitase C-terminal domain LPH44_03325 PF00330 Aconitase family (aconitate hydratase) LPH44_03330 PF04303 PrpF protein LPH44_03350 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LPH44_03350 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LPH44_03350 PF07703 Alpha-2-macroglobulin bait region domain LPH44_03350 PF17962 Bacterial macroglobulin domain 6 LPH44_03350 PF01835 MG2 domain LPH44_03350 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LPH44_03350 PF00207 Alpha-2-macroglobulin family LPH44_03350 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LPH44_03355 PF02583 Metal-sensitive transcriptional repressor LPH44_03360 PF03824 High-affinity nickel-transport protein LPH44_03365 PF07859 alpha/beta hydrolase fold LPH44_03370 PF12852 Cupin LPH44_03370 PF12833 Helix-turn-helix domain LPH44_03385 PF01447 Thermolysin metallopeptidase, catalytic domain LPH44_03385 PF02868 Thermolysin metallopeptidase, alpha-helical domain LPH44_03385 PF16485 Protealysin propeptide LPH44_03390 PF00929 Exonuclease LPH44_03395 PF00924 Mechanosensitive ion channel LPH44_03395 PF05552 Conserved TM helix LPH44_03400 PF02896 PEP-utilising enzyme, TIM barrel domain LPH44_03400 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LPH44_03400 PF00391 PEP-utilising enzyme, mobile domain LPH44_03405 PF03618 Kinase/pyrophosphorylase LPH44_03425 PF04286 Protein of unknown function (DUF445) LPH44_03440 PF04359 Protein of unknown function (DUF493) LPH44_03445 PF03099 Biotin/lipoate A/B protein ligase family LPH44_03450 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LPH44_03450 PF04055 Radical SAM superfamily LPH44_03480 PF01595 Cyclin M transmembrane N-terminal domain LPH44_03480 PF03471 Transporter associated domain LPH44_03480 PF00571 CBS domain LPH44_03495 PF00986 DNA gyrase B subunit, carboxyl terminus LPH44_03495 PF00204 DNA gyrase B LPH44_03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_03495 PF01751 Toprim domain LPH44_03505 PF06418 CTP synthase N-terminus LPH44_03505 PF00117 Glutamine amidotransferase class-I LPH44_03510 PF00793 DAHP synthetase I family LPH44_03515 PF00113 Enolase, C-terminal TIM barrel domain LPH44_03515 PF03952 Enolase, N-terminal domain LPH44_03520 PF04977 Septum formation initiator LPH44_03525 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LPH44_03530 PF02542 YgbB family LPH44_03535 PF01713 Smr domain LPH44_03560 PF02470 MlaD protein LPH44_03560 PF03886 ABC-type transport auxiliary lipoprotein component LPH44_03565 PF00005 ABC transporter LPH44_03570 PF02405 Permease MlaE LPH44_03645 PF04093 rod shape-determining protein MreD LPH44_03650 PF03717 Penicillin-binding Protein dimerisation domain LPH44_03650 PF00905 Penicillin binding protein transpeptidase domain LPH44_03655 PF01098 Cell cycle protein LPH44_03660 PF02547 Queuosine biosynthesis protein LPH44_03665 PF02824 TGS domain LPH44_03665 PF13291 ACT domain LPH44_03665 PF04607 Region found in RelA / SpoT proteins LPH44_03680 PF03776 Septum formation topological specificity factor MinE LPH44_03685 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LPH44_03690 PF03775 Septum formation inhibitor MinC, C-terminal domain LPH44_03690 PF05209 Septum formation inhibitor MinC, N-terminal domain LPH44_03710 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH44_03720 PF01292 Prokaryotic cytochrome b561 LPH44_03725 PF04264 YceI-like domain LPH44_03730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_03730 PF09308 LuxQ, periplasmic LPH44_03730 PF00072 Response regulator receiver domain LPH44_03730 PF00512 His Kinase A (phospho-acceptor) domain LPH44_03740 PF01208 Uroporphyrinogen decarboxylase (URO-D) LPH44_03745 PF01761 3-dehydroquinate synthase LPH44_03750 PF01202 Shikimate kinase LPH44_03755 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LPH44_03755 PF01243 Pyridoxamine 5'-phosphate oxidase LPH44_03765 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH44_03765 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LPH44_03775 PF03932 CutC family LPH44_03795 PF00528 Binding-protein-dependent transport system inner membrane component LPH44_03800 PF00528 Binding-protein-dependent transport system inner membrane component LPH44_03805 PF00005 ABC transporter LPH44_03805 PF12857 TOBE-like domain LPH44_03845 PF01381 Helix-turn-helix LPH44_03925 PF10065 Uncharacterized conserved protein (DUF2303) LPH44_03950 PF04545 Sigma-70, region 4 LPH44_03950 PF04546 Sigma-70, non-essential region LPH44_03950 PF03979 Sigma-70 factor, region 1.1 LPH44_03950 PF00140 Sigma-70 factor, region 1.2 LPH44_03950 PF04542 Sigma-70 region 2 LPH44_03950 PF04539 Sigma-70 region 3 LPH44_03955 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH44_03955 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH44_03965 PF02321 Outer membrane efflux protein LPH44_03970 PF00529 HlyD membrane-fusion protein of T1SS LPH44_03970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH44_03975 PF07690 Major Facilitator Superfamily LPH44_03980 PF12697 Alpha/beta hydrolase family LPH44_03985 PF00155 Aminotransferase class I and II LPH44_03995 PF01040 UbiA prenyltransferase family LPH44_04000 PF00753 Metallo-beta-lactamase superfamily LPH44_04005 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH44_04005 PF01743 Poly A polymerase head domain LPH44_04005 PF01966 HD domain LPH44_04010 PF01464 Transglycosylase SLT domain LPH44_04010 PF14718 Soluble lytic murein transglycosylase L domain LPH44_04020 PF02666 Phosphatidylserine decarboxylase LPH44_04075 PF17831 Pyruvate dehydrogenase E1 component middle domain LPH44_04075 PF00456 Transketolase, thiamine diphosphate binding domain LPH44_04080 PF00698 Acyl transferase domain LPH44_04090 PF00550 Phosphopantetheine attachment site LPH44_04095 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH44_04095 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH44_04100 PF00425 chorismate binding enzyme LPH44_04100 PF04715 Anthranilate synthase component I, N terminal region LPH44_04105 PF02618 YceG-like family LPH44_04110 PF09115 DNA polymerase III, delta subunit, C terminal LPH44_04130 PF00459 Inositol monophosphatase family LPH44_04135 PF00588 SpoU rRNA Methylase family LPH44_04140 PF04055 Radical SAM superfamily LPH44_04145 PF01132 Elongation factor P (EF-P) OB domain LPH44_04145 PF08207 Elongation factor P (EF-P) KOW-like domain LPH44_04145 PF09285 Elongation factor P, C-terminal LPH44_04150 PF01979 Amidohydrolase family LPH44_04160 PF13419 Haloacid dehalogenase-like hydrolase LPH44_04170 PF00561 alpha/beta hydrolase fold LPH44_04175 PF08534 Redoxin LPH44_04205 PF00155 Aminotransferase class I and II LPH44_04210 PF00795 Carbon-nitrogen hydrolase LPH44_04220 PF00849 RNA pseudouridylate synthase LPH44_04220 PF01479 S4 domain LPH44_04225 PF04079 Segregation and condensation complex subunit ScpB LPH44_04230 PF02616 Segregation and condensation protein ScpA LPH44_04260 PF00528 Binding-protein-dependent transport system inner membrane component LPH44_04265 PF00528 Binding-protein-dependent transport system inner membrane component LPH44_04280 PF00795 Carbon-nitrogen hydrolase LPH44_04285 PF04371 Porphyromonas-type peptidyl-arginine deiminase LPH44_04295 PF00444 Ribosomal protein L36 LPH44_04300 PF02224 Cytidylate kinase LPH44_04305 PF00575 S1 RNA binding domain LPH44_04310 PF00216 Bacterial DNA-binding protein LPH44_04320 PF18073 Rubredoxin metal binding domain LPH44_04325 PF00953 Glycosyl transferase family 4 LPH44_04330 PF02719 Polysaccharide biosynthesis protein LPH44_04335 PF00483 Nucleotidyl transferase LPH44_04340 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LPH44_04340 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LPH44_04345 PF00478 IMP dehydrogenase / GMP reductase domain LPH44_04345 PF00571 CBS domain LPH44_04350 PF00117 Glutamine amidotransferase class-I LPH44_04350 PF02540 NAD synthase LPH44_04350 PF00958 GMP synthase C terminal domain LPH44_04400 PF09571 XcyI restriction endonuclease LPH44_04415 PF00005 ABC transporter LPH44_04415 PF17755 UvrA DNA-binding domain LPH44_04415 PF17760 UvrA interaction domain LPH44_04420 PF00829 Ribosomal prokaryotic L21 protein LPH44_04425 PF01016 Ribosomal L27 protein LPH44_04430 PF01018 GTP1/OBG LPH44_04430 PF01926 50S ribosome-binding GTPase LPH44_04435 PF01649 Ribosomal protein S20 LPH44_04440 PF03023 Lipid II flippase MurJ LPH44_04445 PF06574 FAD synthetase LPH44_04445 PF01687 Riboflavin kinase LPH44_04450 PF08264 Anticodon-binding domain of tRNA LPH44_04450 PF00133 tRNA synthetases class I (I, L, M and V) LPH44_04450 PF06827 Zinc finger found in FPG and IleRS LPH44_04455 PF01252 Signal peptidase (SPase) II LPH44_04460 PF02401 LytB protein LPH44_04530 PF13087 AAA domain LPH44_04530 PF13091 PLD-like domain LPH44_04535 PF06594 Haemolysin-type calcium binding protein related domain LPH44_04535 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH44_04600 PF00005 ABC transporter LPH44_04600 PF03412 Peptidase C39 family LPH44_04600 PF00664 ABC transporter transmembrane region LPH44_04605 PF00155 Aminotransferase class I and II LPH44_04610 PF01522 Polysaccharide deacetylase LPH44_04615 PF00462 Glutaredoxin LPH44_04625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH44_04625 PF03466 LysR substrate binding domain LPH44_04635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPH44_04645 PF00857 Isochorismatase family LPH44_04655 PF08240 Alcohol dehydrogenase GroES-like domain LPH44_04655 PF00107 Zinc-binding dehydrogenase LPH44_04660 PF00107 Zinc-binding dehydrogenase LPH44_04660 PF08240 Alcohol dehydrogenase GroES-like domain LPH44_04680 PF00873 AcrB/AcrD/AcrF family LPH44_04685 PF00873 AcrB/AcrD/AcrF family LPH44_04690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH44_04695 PF14489 QueF-like protein LPH44_04695 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LPH44_04710 PF00330 Aconitase family (aconitate hydratase) LPH44_04715 PF00694 Aconitase C-terminal domain LPH44_04720 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH44_04735 PF02397 Bacterial sugar transferase LPH44_04750 PF13439 Glycosyltransferase Family 4 LPH44_04750 PF00534 Glycosyl transferases group 1 LPH44_04760 PF01943 Polysaccharide biosynthesis protein LPH44_04775 PF00486 Transcriptional regulatory protein, C terminal LPH44_04775 PF00072 Response regulator receiver domain LPH44_04780 PF05958 tRNA (Uracil-5-)-methyltransferase LPH44_04785 PF01928 CYTH domain LPH44_04790 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH44_04795 PF00156 Phosphoribosyl transferase domain LPH44_04800 PF01048 Phosphorylase superfamily LPH44_04805 PF00313 'Cold-shock' DNA-binding domain LPH44_04815 PF01668 SmpB protein LPH44_04825 PF03658 RnfH family Ubiquitin LPH44_04830 PF04355 SmpA / OmlA family LPH44_04835 PF01475 Ferric uptake regulator family LPH44_04840 PF02463 RecF/RecN/SMC N terminal domain LPH44_04845 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LPH44_04845 PF01628 HrcA protein C terminal domain LPH44_04850 PF01025 GrpE LPH44_04855 PF00012 Hsp70 protein LPH44_04860 PF00684 DnaJ central domain LPH44_04860 PF01556 DnaJ C terminal domain LPH44_04860 PF00226 DnaJ domain LPH44_04870 PF00486 Transcriptional regulatory protein, C terminal LPH44_04870 PF00072 Response regulator receiver domain LPH44_04875 PF01219 Prokaryotic diacylglycerol kinase LPH44_04880 PF01790 Prolipoprotein diacylglyceryl transferase LPH44_04885 PF00303 Thymidylate synthase LPH44_04890 PF00186 Dihydrofolate reductase LPH44_04895 PF13700 Domain of unknown function (DUF4158) LPH44_04895 PF01526 Tn3 transposase DDE domain LPH44_04905 PF00072 Response regulator receiver domain LPH44_04905 PF00486 Transcriptional regulatory protein, C terminal LPH44_04910 PF02702 Osmosensitive K+ channel His kinase sensor domain LPH44_04910 PF00512 His Kinase A (phospho-acceptor) domain LPH44_04910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_04910 PF13493 Domain of unknown function (DUF4118) LPH44_04910 PF13492 GAF domain LPH44_04915 PF02669 K+-transporting ATPase, c chain LPH44_04925 PF03814 Potassium-transporting ATPase A subunit LPH44_04940 PF00149 Calcineurin-like phosphoesterase LPH44_04945 PF04379 ApaG domain LPH44_04950 PF00398 Ribosomal RNA adenine dimethylase LPH44_04955 PF00929 Exonuclease LPH44_04960 PF01895 PhoU domain LPH44_04965 PF00005 ABC transporter LPH44_04970 PF00528 Binding-protein-dependent transport system inner membrane component LPH44_04975 PF00528 Binding-protein-dependent transport system inner membrane component LPH44_04980 PF12849 PBP superfamily domain LPH44_04985 PF00999 Sodium/hydrogen exchanger family LPH44_04985 PF02254 TrkA-N domain LPH44_04990 PF07715 TonB-dependent Receptor Plug Domain LPH44_04990 PF00593 TonB dependent receptor LPH44_04995 PF01323 DSBA-like thioredoxin domain LPH44_05005 PF00005 ABC transporter LPH44_05005 PF12848 ABC transporter LPH44_05020 PF01066 CDP-alcohol phosphatidyltransferase LPH44_05025 PF01541 GIY-YIG catalytic domain LPH44_05025 PF02151 UvrB/uvrC motif LPH44_05025 PF08459 UvrC Helix-hairpin-helix N-terminal LPH44_05030 PF01451 Low molecular weight phosphotyrosine protein phosphatase LPH44_05035 PF02348 Cytidylyltransferase LPH44_05040 PF10609 NUBPL iron-transfer P-loop NTPase LPH44_05045 PF00202 Aminotransferase class-III LPH44_05055 PF00490 Delta-aminolevulinic acid dehydratase LPH44_05065 PF12146 Serine aminopeptidase, S33 LPH44_05080 PF01134 Glucose inhibited division protein A LPH44_05080 PF13932 GidA associated domain LPH44_05100 PF13649 Methyltransferase domain LPH44_05120 PF02649 Type I GTP cyclohydrolase folE2 LPH44_05125 PF00132 Bacterial transferase hexapeptide (six repeats) LPH44_05130 PF00873 AcrB/AcrD/AcrF family LPH44_05135 PF00529 HlyD membrane-fusion protein of T1SS LPH44_05135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH44_05140 PF05088 Bacterial NAD-glutamate dehydrogenase LPH44_05145 PF01513 ATP-NAD kinase LPH44_05165 PF12706 Beta-lactamase superfamily domain LPH44_05175 PF08411 Exonuclease C-terminal LPH44_05175 PF00929 Exonuclease LPH44_05195 PF00999 Sodium/hydrogen exchanger family LPH44_05205 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LPH44_05215 PF01812 5-formyltetrahydrofolate cyclo-ligase family LPH44_05235 PF03695 Uncharacterised protein family (UPF0149) LPH44_05240 PF00557 Metallopeptidase family M24 LPH44_05240 PF05195 Aminopeptidase P, N-terminal domain LPH44_05245 PF00293 NUDIX domain LPH44_05280 PF01063 Amino-transferase class IV LPH44_05295 PF02954 Bacterial regulatory protein, Fis family LPH44_05305 PF01381 Helix-turn-helix LPH44_05320 PF00535 Glycosyl transferase family 2 LPH44_05330 PF00925 GTP cyclohydrolase II LPH44_05340 PF08534 Redoxin LPH44_05365 PF00959 Phage lysozyme LPH44_05385 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH44_05385 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH44_05385 PF00476 DNA polymerase family A LPH44_05385 PF01612 3'-5' exonuclease LPH44_05410 PF07963 Prokaryotic N-terminal methylation motif LPH44_05410 PF00114 Pilin (bacterial filament) LPH44_05425 PF00753 Metallo-beta-lactamase superfamily LPH44_05425 PF16123 Hydroxyacylglutathione hydrolase C-terminus LPH44_05435 PF00075 RNase H LPH44_05440 PF00929 Exonuclease LPH44_05460 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LPH44_05470 PF13632 Glycosyl transferase family group 2 LPH44_05475 PF02230 Phospholipase/Carboxylesterase LPH44_05480 PF06580 Histidine kinase LPH44_05480 PF07694 5TMR of 5TMR-LYT LPH44_05485 PF00072 Response regulator receiver domain LPH44_05485 PF04397 LytTr DNA-binding domain LPH44_05490 PF03900 Porphobilinogen deaminase, C-terminal domain LPH44_05490 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LPH44_05510 PF00437 Type II/IV secretion system protein LPH44_05515 PF00437 Type II/IV secretion system protein LPH44_05530 PF00535 Glycosyl transferase family 2 LPH44_05540 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH44_05540 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH44_05555 PF09924 Uncharacterised conserved protein (DUF2156) LPH44_05555 PF03706 Lysylphosphatidylglycerol synthase TM region LPH44_05560 PF01042 Endoribonuclease L-PSP LPH44_05575 PF01430 Hsp33 protein LPH44_05580 PF00912 Transglycosylase LPH44_05585 PF00488 MutS domain V LPH44_05585 PF05190 MutS family domain IV LPH44_05585 PF05192 MutS domain III LPH44_05585 PF05188 MutS domain II LPH44_05585 PF01624 MutS domain I LPH44_05590 PF01168 Alanine racemase, N-terminal domain LPH44_05605 PF08279 HTH domain LPH44_05605 PF02237 Biotin protein ligase C terminal domain LPH44_05605 PF03099 Biotin/lipoate A/B protein ligase family LPH44_05610 PF03309 Type III pantothenate kinase LPH44_05640 PF01183 Glycosyl hydrolases family 25 LPH44_05660 PF01381 Helix-turn-helix LPH44_05670 PF00114 Pilin (bacterial filament) LPH44_05670 PF07963 Prokaryotic N-terminal methylation motif LPH44_05770 PF00589 Phage integrase family LPH44_05785 PF00959 Phage lysozyme LPH44_05800 PF00574 Clp protease LPH44_05840 PF01022 Bacterial regulatory protein, arsR family LPH44_05855 PF00873 AcrB/AcrD/AcrF family LPH44_05880 PF00581 Rhodanese-like domain LPH44_05885 PF02556 Preprotein translocase subunit SecB LPH44_05890 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LPH44_05890 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LPH44_05915 PF12169 DNA polymerase III subunits gamma and tau domain III LPH44_05915 PF12170 DNA polymerase III tau subunit V interacting with alpha LPH44_05920 PF02575 YbaB/EbfC DNA-binding family LPH44_05925 PF13662 Toprim domain LPH44_05925 PF02132 RecR protein LPH44_05930 PF01230 HIT domain LPH44_05940 PF01841 Transglutaminase-like superfamily LPH44_05940 PF13559 Domain of unknown function (DUF4129) LPH44_05940 PF11992 Domain of unknown function (DUF3488) LPH44_05950 PF17863 AAA lid domain LPH44_05950 PF07726 ATPase family associated with various cellular activities (AAA) LPH44_05960 PF02620 Large ribosomal RNA subunit accumulation protein YceD LPH44_05965 PF01783 Ribosomal L32p protein family LPH44_05970 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH44_05970 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH44_05985 PF01341 Glycosyl hydrolases family 6 LPH44_05985 PF00041 Fibronectin type III domain LPH44_05985 PF00553 Cellulose binding domain LPH44_05990 PF08502 LeuA allosteric (dimerisation) domain LPH44_05990 PF00682 HMGL-like LPH44_05995 PF00291 Pyridoxal-phosphate dependent enzyme LPH44_06005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPH44_06005 PF00205 Thiamine pyrophosphate enzyme, central domain LPH44_06005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPH44_06010 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LPH44_06010 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LPH44_06015 PF17804 Tail specific protease N-terminal domain LPH44_06015 PF03572 Peptidase family S41 LPH44_06015 PF00595 PDZ domain LPH44_06015 PF11818 C-terminal domain of tail specific protease (DUF3340) LPH44_06020 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LPH44_06025 PF02566 OsmC-like protein LPH44_06030 PF03969 AFG1-like ATPase LPH44_06035 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH44_06040 PF02492 CobW/HypB/UreG, nucleotide-binding domain LPH44_06040 PF07683 Cobalamin synthesis protein cobW C-terminal domain LPH44_06050 PF00551 Formyl transferase LPH44_06060 PF03109 ABC1 family LPH44_06070 PF12241 Trans-2-enoyl-CoA reductase catalytic region LPH44_06070 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LPH44_06070 PF07055 Enoyl reductase FAD binding domain LPH44_06090 PF00881 Nitroreductase family LPH44_06095 PF04264 YceI-like domain LPH44_06100 PF02673 Bacitracin resistance protein BacA LPH44_06105 PF03951 Glutamine synthetase, beta-Grasp domain LPH44_06105 PF00120 Glutamine synthetase, catalytic domain LPH44_06110 PF00543 Nitrogen regulatory protein P-II LPH44_06115 PF00909 Ammonium Transporter Family LPH44_06130 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LPH44_06130 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LPH44_06135 PF02910 Fumarate reductase flavoprotein C-term LPH44_06135 PF00890 FAD binding domain LPH44_06140 PF02445 Quinolinate synthetase A protein LPH44_06145 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH44_06145 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH44_06150 PF01026 TatD related DNase LPH44_06170 PF00300 Histidine phosphatase superfamily (branch 1) LPH44_06175 PF10459 Peptidase S46 LPH44_06180 PF13667 ThiC-associated domain LPH44_06180 PF01964 Radical SAM ThiC family LPH44_06185 PF00175 Oxidoreductase NAD-binding domain LPH44_06185 PF00970 Oxidoreductase FAD-binding domain LPH44_06190 PF00255 Glutathione peroxidase LPH44_06195 PF00854 POT family LPH44_06200 PF04493 Endonuclease V LPH44_06205 PF00300 Histidine phosphatase superfamily (branch 1) LPH44_06210 PF04055 Radical SAM superfamily LPH44_06220 PF00691 OmpA family LPH44_06225 PF04052 TolB amino-terminal domain LPH44_06225 PF07676 WD40-like Beta Propeller Repeat LPH44_06235 PF02472 Biopolymer transport protein ExbD/TolR LPH44_06240 PF01618 MotA/TolQ/ExbB proton channel family LPH44_06245 PF03061 Thioesterase superfamily LPH44_06250 PF05491 RuvB C-terminal winged helix domain LPH44_06250 PF17864 RuvB AAA lid domain LPH44_06250 PF05496 Holliday junction DNA helicase RuvB P-loop domain LPH44_06255 PF02705 K+ potassium transporter LPH44_06260 PF07499 RuvA, C-terminal domain LPH44_06260 PF01330 RuvA N terminal domain LPH44_06265 PF02075 Crossover junction endodeoxyribonuclease RuvC LPH44_06270 PF01709 Transcriptional regulator LPH44_06280 PF04362 Bacterial Fe(2+) trafficking LPH44_06285 PF00633 Helix-hairpin-helix motif LPH44_06285 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH44_06285 PF14815 NUDIX domain LPH44_06290 PF02881 SRP54-type protein, helical bundle domain LPH44_06290 PF00448 SRP54-type protein, GTPase domain LPH44_06315 PF01850 PIN domain LPH44_06390 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LPH44_06395 PF04221 RelB antitoxin LPH44_06470 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LPH44_06525 PF06508 Queuosine biosynthesis protein QueC LPH44_06530 PF01336 OB-fold nucleic acid binding domain LPH44_06530 PF00152 tRNA synthetases class II (D, K and N) LPH44_06530 PF02938 GAD domain LPH44_06550 PF05683 Fumarase C-terminus LPH44_06550 PF05681 Fumarate hydratase (Fumerase) LPH44_06570 PF01648 4'-phosphopantetheinyl transferase superfamily LPH44_06575 PF02527 rRNA small subunit methyltransferase G LPH44_06580 PF02779 Transketolase, pyrimidine binding domain LPH44_06580 PF02780 Transketolase, C-terminal domain LPH44_06580 PF00456 Transketolase, thiamine diphosphate binding domain LPH44_06585 PF00375 Sodium:dicarboxylate symporter family LPH44_06595 PF01625 Peptide methionine sulfoxide reductase LPH44_06610 PF01432 Peptidase family M3 LPH44_06615 PF06903 VirK protein LPH44_06620 PF02875 Mur ligase family, glutamate ligase domain LPH44_06620 PF08245 Mur ligase middle domain LPH44_06635 PF00156 Phosphoribosyl transferase domain LPH44_06645 PF01339 CheB methylesterase LPH44_06645 PF00072 Response regulator receiver domain LPH44_06650 PF01584 CheW-like domain LPH44_06650 PF02895 Signal transducing histidine kinase, homodimeric domain LPH44_06650 PF01627 Hpt domain LPH44_06650 PF00072 Response regulator receiver domain LPH44_06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_06655 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LPH44_06655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPH44_06660 PF01584 CheW-like domain LPH44_06665 PF00072 Response regulator receiver domain LPH44_06670 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LPH44_06670 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LPH44_06685 PF02092 Glycyl-tRNA synthetase beta subunit LPH44_06685 PF05746 DALR anticodon binding domain LPH44_06690 PF02091 Glycyl-tRNA synthetase alpha subunit LPH44_06695 PF02540 NAD synthase LPH44_06695 PF00795 Carbon-nitrogen hydrolase LPH44_06720 PF03692 Putative zinc- or iron-chelating domain LPH44_06730 PF00561 alpha/beta hydrolase fold LPH44_06740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH44_06740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH44_06750 PF00588 SpoU rRNA Methylase family LPH44_06760 PF02142 MGS-like domain LPH44_06760 PF01808 AICARFT/IMPCHase bienzyme LPH44_06765 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LPH44_06765 PF02843 Phosphoribosylglycinamide synthetase, C domain LPH44_06765 PF02844 Phosphoribosylglycinamide synthetase, N domain LPH44_06785 PF12805 FUSC-like inner membrane protein yccS LPH44_06795 PF03186 CobD/Cbib protein LPH44_06800 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH44_06800 PF05658 Head domain of trimeric autotransporter adhesin LPH44_06800 PF03895 YadA-like membrane anchor domain LPH44_06805 PF01227 GTP cyclohydrolase I LPH44_06810 PF00132 Bacterial transferase hexapeptide (six repeats) LPH44_06815 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPH44_06815 PF00588 SpoU rRNA Methylase family LPH44_06820 PF00575 S1 RNA binding domain LPH44_06820 PF00773 RNB domain LPH44_06820 PF08206 Ribonuclease B OB domain LPH44_06820 PF08461 Ribonuclease R winged-helix domain LPH44_06820 PF17876 Cold shock domain LPH44_06830 PF00959 Phage lysozyme LPH44_06900 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH44_06905 PF07690 Major Facilitator Superfamily LPH44_06910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH44_06910 PF03466 LysR substrate binding domain LPH44_06925 PF01161 Phosphatidylethanolamine-binding protein LPH44_06930 PF00719 Inorganic pyrophosphatase LPH44_06940 PF00085 Thioredoxin LPH44_06950 PF08264 Anticodon-binding domain of tRNA LPH44_06950 PF00133 tRNA synthetases class I (I, L, M and V) LPH44_06950 PF13603 Leucyl-tRNA synthetase, Domain 2 LPH44_06965 PF01467 Cytidylyltransferase-like LPH44_06980 PF13406 Transglycosylase SLT domain LPH44_06985 PF03330 Lytic transglycolase LPH44_06985 PF05036 Sporulation related domain LPH44_07090 PF13332 Hemagglutinin repeat LPH44_07090 PF05860 haemagglutination activity domain LPH44_07090 PF15605 Bacterial toxin 28 LPH44_07090 PF04829 Pre-toxin domain with VENN motif LPH44_07120 PF05860 haemagglutination activity domain LPH44_07120 PF04829 Pre-toxin domain with VENN motif LPH44_07120 PF13332 Hemagglutinin repeat LPH44_07125 PF04829 Pre-toxin domain with VENN motif LPH44_07125 PF05860 haemagglutination activity domain LPH44_07125 PF13332 Hemagglutinin repeat LPH44_07125 PF13018 Extended Signal Peptide of Type V secretion system LPH44_07220 PF15605 Bacterial toxin 28 LPH44_07220 PF04829 Pre-toxin domain with VENN motif LPH44_07220 PF05860 haemagglutination activity domain LPH44_07220 PF13332 Hemagglutinin repeat LPH44_07220 PF04829 Pre-toxin domain with VENN motif LPH44_07220 PF13332 Hemagglutinin repeat LPH44_07220 PF05860 haemagglutination activity domain LPH44_07220 PF15605 Bacterial toxin 28 LPH44_07225 PF05860 haemagglutination activity domain LPH44_07225 PF13332 Hemagglutinin repeat LPH44_07225 PF13018 Extended Signal Peptide of Type V secretion system LPH44_07225 PF04829 Pre-toxin domain with VENN motif LPH44_07240 PF01810 LysE type translocator LPH44_07260 PF08207 Elongation factor P (EF-P) KOW-like domain LPH44_07260 PF01132 Elongation factor P (EF-P) OB domain LPH44_07260 PF09285 Elongation factor P, C-terminal LPH44_07265 PF01565 FAD binding domain LPH44_07265 PF02913 FAD linked oxidases, C-terminal domain LPH44_07270 PF01842 ACT domain LPH44_07270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPH44_07270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPH44_07275 PF13520 Amino acid permease LPH44_07280 PF13520 Amino acid permease LPH44_07285 PF00596 Class II Aldolase and Adducin N-terminal domain LPH44_07290 PF03079 ARD/ARD' family LPH44_07320 PF01502 Phosphoribosyl-AMP cyclohydrolase LPH44_07320 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LPH44_07325 PF00977 Histidine biosynthesis protein LPH44_07330 PF00977 Histidine biosynthesis protein LPH44_07335 PF00117 Glutamine amidotransferase class-I LPH44_07340 PF00475 Imidazoleglycerol-phosphate dehydratase LPH44_07345 PF00155 Aminotransferase class I and II LPH44_07350 PF00815 Histidinol dehydrogenase LPH44_07355 PF08029 HisG, C-terminal domain LPH44_07355 PF01634 ATP phosphoribosyltransferase LPH44_07370 PF13393 Histidyl-tRNA synthetase LPH44_07370 PF03129 Anticodon binding domain LPH44_07380 PF14821 Threonine synthase N terminus LPH44_07380 PF00291 Pyridoxal-phosphate dependent enzyme LPH44_07385 PF00288 GHMP kinases N terminal domain LPH44_07385 PF08544 GHMP kinases C terminal LPH44_07390 PF00696 Amino acid kinase family LPH44_07390 PF13840 ACT domain LPH44_07390 PF00742 Homoserine dehydrogenase LPH44_07390 PF03447 Homoserine dehydrogenase, NAD binding domain LPH44_07390 PF01842 ACT domain LPH44_07400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH44_07400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH44_07405 PF03652 Holliday junction resolvase LPH44_07410 PF02622 Uncharacterized ACR, COG1678 LPH44_07415 PF07943 Penicillin-binding protein 5, C-terminal domain LPH44_07415 PF00768 D-alanyl-D-alanine carboxypeptidase LPH44_07420 PF00141 Peroxidase LPH44_07425 PF00226 DnaJ domain LPH44_07425 PF01556 DnaJ C terminal domain LPH44_07435 PF06832 Penicillin-Binding Protein C-terminus Family LPH44_07435 PF00912 Transglycosylase LPH44_07435 PF00905 Penicillin binding protein transpeptidase domain LPH44_07440 PF07715 TonB-dependent Receptor Plug Domain LPH44_07440 PF00593 TonB dependent receptor LPH44_07455 PF04542 Sigma-70 region 2 LPH44_07455 PF08281 Sigma-70, region 4 LPH44_07465 PF13180 PDZ domain LPH44_07470 PF06421 GTP-binding protein LepA C-terminus LPH44_07470 PF00679 Elongation factor G C-terminus LPH44_07470 PF03144 Elongation factor Tu domain 2 LPH44_07470 PF00009 Elongation factor Tu GTP binding domain LPH44_07475 PF10502 Signal peptidase, peptidase S26 LPH44_07485 PF00035 Double-stranded RNA binding motif LPH44_07485 PF14622 Ribonuclease-III-like LPH44_07490 PF07650 KH domain LPH44_07490 PF01926 50S ribosome-binding GTPase LPH44_07495 PF02565 Recombination protein O C terminal LPH44_07495 PF11967 Recombination protein O N terminal LPH44_07500 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LPH44_07500 PF02779 Transketolase, pyrimidine binding domain LPH44_07500 PF02780 Transketolase, C-terminal domain LPH44_07510 PF00474 Sodium:solute symporter family LPH44_07520 PF13193 AMP-binding enzyme C-terminal domain LPH44_07520 PF00501 AMP-binding enzyme LPH44_07520 PF16177 Acetyl-coenzyme A synthetase N-terminus LPH44_07525 PF02659 Putative manganese efflux pump LPH44_07530 PF00106 short chain dehydrogenase LPH44_07545 PF13360 PQQ-like domain LPH44_07550 PF00326 Prolyl oligopeptidase family LPH44_07550 PF07676 WD40-like Beta Propeller Repeat LPH44_07550 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LPH44_07555 PF03169 OPT oligopeptide transporter protein LPH44_07560 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LPH44_07560 PF01266 FAD dependent oxidoreductase LPH44_07565 PF00230 Major intrinsic protein LPH44_07570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPH44_07570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPH44_07585 PF08267 Cobalamin-independent synthase, N-terminal domain LPH44_07585 PF01717 Cobalamin-independent synthase, Catalytic domain LPH44_07590 PF02677 Epoxyqueuosine reductase QueH LPH44_07600 PF00501 AMP-binding enzyme LPH44_07610 PF00535 Glycosyl transferase family 2 LPH44_07615 PF01370 NAD dependent epimerase/dehydratase family LPH44_07620 PF17762 HTH domain found in ParB protein LPH44_07620 PF02195 ParB-like nuclease domain LPH44_07625 PF13614 AAA domain LPH44_07640 PF02403 Seryl-tRNA synthetase N-terminal domain LPH44_07640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH44_07645 PF03544 Gram-negative bacterial TonB protein C-terminal LPH44_07650 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH44_07655 PF01842 ACT domain LPH44_07655 PF01817 Chorismate mutase type II LPH44_07655 PF00800 Prephenate dehydratase LPH44_07660 PF00266 Aminotransferase class-V LPH44_07670 PF12679 ABC-2 family transporter protein LPH44_07675 PF00005 ABC transporter LPH44_07705 PF00440 Bacterial regulatory proteins, tetR family LPH44_07710 PF01209 ubiE/COQ5 methyltransferase family LPH44_07720 PF00294 pfkB family carbohydrate kinase LPH44_07725 PF07690 Major Facilitator Superfamily LPH44_07735 PF04102 SlyX LPH44_07740 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH44_07740 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH44_07740 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH44_07745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH44_07745 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH44_07750 PF00255 Glutathione peroxidase LPH44_07760 PF00005 ABC transporter LPH44_07775 PF10415 Fumarase C C-terminus LPH44_07775 PF00206 Lyase LPH44_07780 PF00206 Lyase LPH44_07780 PF08328 Adenylosuccinate lyase C-terminal LPH44_07785 PF08007 Cupin superfamily protein LPH44_07790 PF02779 Transketolase, pyrimidine binding domain LPH44_07790 PF16870 2-oxoglutarate dehydrogenase C-terminal LPH44_07790 PF00676 Dehydrogenase E1 component LPH44_07790 PF16078 2-oxoglutarate dehydrogenase N-terminus LPH44_07795 PF02817 e3 binding domain LPH44_07795 PF00364 Biotin-requiring enzyme LPH44_07795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH44_07800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH44_07800 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH44_07810 PF00899 ThiF family LPH44_07825 PF00027 Cyclic nucleotide-binding domain LPH44_07825 PF00325 Bacterial regulatory proteins, crp family LPH44_07830 PF02675 S-adenosylmethionine decarboxylase LPH44_07835 PF03232 Ubiquinone biosynthesis protein COQ7 LPH44_07840 PF00572 Ribosomal protein L13 LPH44_07845 PF00380 Ribosomal protein S9/S16 LPH44_07850 PF00285 Citrate synthase, C-terminal domain LPH44_07855 PF01197 Ribosomal protein L31 LPH44_07860 PF00814 Glycoprotease family LPH44_07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH44_07865 PF03466 LysR substrate binding domain LPH44_07870 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH44_07870 PF13192 Thioredoxin domain LPH44_07875 PF10417 C-terminal domain of 1-Cys peroxiredoxin LPH44_07875 PF00578 AhpC/TSA family LPH44_07880 PF05658 Head domain of trimeric autotransporter adhesin LPH44_07880 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH44_07880 PF03895 YadA-like membrane anchor domain LPH44_07880 PF13018 Extended Signal Peptide of Type V secretion system LPH44_07885 PF00263 Bacterial type II and III secretion system protein LPH44_07885 PF03958 Bacterial type II/III secretion system short domain LPH44_07895 PF10741 Type II secretion system (T2SS), protein M subtype b LPH44_07900 PF05137 Fimbrial assembly protein (PilN) LPH44_07905 PF03934 Type II secretion system (T2SS), protein K LPH44_07915 PF03934 Type II secretion system (T2SS), protein K LPH44_07925 PF07963 Prokaryotic N-terminal methylation motif LPH44_07930 PF12019 Type II transport protein GspH LPH44_07935 PF08334 Type II secretion system (T2SS), protein G LPH44_07940 PF00482 Type II secretion system (T2SS), protein F LPH44_07945 PF00437 Type II/IV secretion system protein LPH44_07945 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH44_07965 PF05175 Methyltransferase small domain LPH44_07965 PF17827 PrmC N-terminal domain LPH44_07975 PF00561 alpha/beta hydrolase fold LPH44_07990 PF06969 HemN C-terminal domain LPH44_07990 PF04055 Radical SAM superfamily LPH44_07995 PF01725 Ham1 family LPH44_08000 PF03725 3' exoribonuclease family, domain 2 LPH44_08000 PF01138 3' exoribonuclease family, domain 1 LPH44_08005 PF03755 YicC-like family, N-terminal region LPH44_08005 PF08340 Domain of unknown function (DUF1732) LPH44_08010 PF00625 Guanylate kinase LPH44_08015 PF01192 RNA polymerase Rpb6 LPH44_08020 PF00009 Elongation factor Tu GTP binding domain LPH44_08025 PF01507 Phosphoadenosine phosphosulfate reductase family LPH44_08030 PF00175 Oxidoreductase NAD-binding domain LPH44_08030 PF00667 FAD binding domain LPH44_08030 PF00258 Flavodoxin LPH44_08035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPH44_08035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPH44_08040 PF01507 Phosphoadenosine phosphosulfate reductase family LPH44_08065 PF13369 Transglutaminase-like superfamily LPH44_08100 PF11838 ERAP1-like C-terminal domain LPH44_08100 PF01433 Peptidase family M1 domain LPH44_08105 PF01209 ubiE/COQ5 methyltransferase family LPH44_08115 PF00004 ATPase family associated with various cellular activities (AAA) LPH44_08115 PF07724 AAA domain (Cdc48 subfamily) LPH44_08115 PF10431 C-terminal, D2-small domain, of ClpB protein LPH44_08120 PF00227 Proteasome subunit LPH44_08130 PF02899 Phage integrase, N-terminal SAM-like domain LPH44_08130 PF00589 Phage integrase family LPH44_08140 PF01678 Diaminopimelate epimerase LPH44_08150 PF00326 Prolyl oligopeptidase family LPH44_08150 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LPH44_08160 PF02082 Transcriptional regulator LPH44_08165 PF01458 Uncharacterized protein family (UPF0051) LPH44_08170 PF00005 ABC transporter LPH44_08175 PF01458 Uncharacterized protein family (UPF0051) LPH44_08180 PF00266 Aminotransferase class-V LPH44_08185 PF00355 Rieske [2Fe-2S] domain LPH44_08190 PF13439 Glycosyltransferase Family 4 LPH44_08190 PF00534 Glycosyl transferases group 1 LPH44_08195 PF01522 Polysaccharide deacetylase LPH44_08200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH44_08200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH44_08200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH44_08200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH44_08205 PF01039 Carboxyl transferase domain LPH44_08205 PF17848 Acetyl-coA carboxylase zinc finger domain LPH44_08220 PF01979 Amidohydrolase family LPH44_08225 PF01380 SIS domain LPH44_08235 PF07690 Major Facilitator Superfamily LPH44_08245 PF02685 Glucokinase LPH44_08270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_08270 PF00512 His Kinase A (phospho-acceptor) domain LPH44_08285 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LPH44_08290 PF00004 ATPase family associated with various cellular activities (AAA) LPH44_08290 PF16193 AAA C-terminal domain LPH44_08290 PF12002 MgsA AAA+ ATPase C terminal LPH44_08295 PF03548 Outer membrane lipoprotein carrier protein LolA LPH44_08310 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LPH44_08310 PF17854 FtsK alpha domain LPH44_08310 PF09397 Ftsk gamma domain LPH44_08310 PF01580 FtsK/SpoIIIE family LPH44_08315 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH44_08325 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LPH44_08330 PF01176 Translation initiation factor 1A / IF-1 LPH44_08335 PF17871 AAA lid domain LPH44_08335 PF02861 Clp amino terminal domain, pathogenicity island component LPH44_08335 PF10431 C-terminal, D2-small domain, of ClpB protein LPH44_08335 PF07724 AAA domain (Cdc48 subfamily) LPH44_08335 PF00004 ATPase family associated with various cellular activities (AAA) LPH44_08340 PF02617 ATP-dependent Clp protease adaptor protein ClpS LPH44_08345 PF00293 NUDIX domain LPH44_08355 PF04356 Protein of unknown function (DUF489) LPH44_08370 PF01323 DSBA-like thioredoxin domain LPH44_08380 PF01926 50S ribosome-binding GTPase LPH44_08385 PF04107 Glutamate-cysteine ligase family 2(GCS2) LPH44_08395 PF00202 Aminotransferase class-III LPH44_08400 PF00027 Cyclic nucleotide-binding domain LPH44_08400 PF00520 Ion transport protein LPH44_08405 PF02899 Phage integrase, N-terminal SAM-like domain LPH44_08405 PF00589 Phage integrase family LPH44_08410 PF10411 Disulfide bond isomerase protein N-terminus LPH44_08410 PF13098 Thioredoxin-like domain LPH44_08415 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LPH44_08415 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LPH44_08415 PF02769 AIR synthase related protein, C-terminal domain LPH44_08425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH44_08435 PF00571 CBS domain LPH44_08435 PF01380 SIS domain LPH44_08455 PF00005 ABC transporter LPH44_08455 PF12399 Branched-chain amino acid ATP-binding cassette transporter LPH44_08460 PF00309 Sigma-54 factor, Activator interacting domain (AID) LPH44_08460 PF04963 Sigma-54 factor, core binding domain LPH44_08460 PF04552 Sigma-54, DNA binding domain LPH44_08465 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LPH44_08470 PF07475 HPr Serine kinase C-terminal domain LPH44_08470 PF02603 HPr Serine kinase N terminus LPH44_08475 PF03668 P-loop ATPase protein family LPH44_08485 PF00381 PTS HPr component phosphorylation site LPH44_08490 PF05524 PEP-utilising enzyme, N-terminal LPH44_08490 PF00391 PEP-utilising enzyme, mobile domain LPH44_08490 PF02896 PEP-utilising enzyme, TIM barrel domain LPH44_08495 PF00571 CBS domain LPH44_08495 PF01769 Divalent cation transporter LPH44_08495 PF03448 MgtE intracellular N domain LPH44_08500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPH44_08535 PF08281 Sigma-70, region 4 LPH44_08535 PF04542 Sigma-70 region 2 LPH44_08545 PF00082 Subtilase family LPH44_08555 PF00436 Single-strand binding protein family LPH44_08560 PF00348 Polyprenyl synthetase LPH44_08565 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LPH44_08565 PF06481 COX Aromatic Rich Motif LPH44_08570 PF00115 Cytochrome C and Quinol oxidase polypeptide I LPH44_08575 PF00510 Cytochrome c oxidase subunit III LPH44_08580 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LPH44_08585 PF02347 Glycine cleavage system P-protein LPH44_08595 PF00270 DEAD/DEAH box helicase LPH44_08595 PF11898 Domain of unknown function (DUF3418) LPH44_08595 PF04408 Helicase associated domain (HA2) LPH44_08595 PF00271 Helicase conserved C-terminal domain LPH44_08595 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LPH44_08600 PF00210 Ferritin-like domain LPH44_08605 PF00270 DEAD/DEAH box helicase LPH44_08605 PF00570 HRDC domain LPH44_08605 PF16124 RecQ zinc-binding LPH44_08605 PF09382 RQC domain LPH44_08605 PF00271 Helicase conserved C-terminal domain LPH44_08625 PF00296 Luciferase-like monooxygenase LPH44_08630 PF18073 Rubredoxin metal binding domain LPH44_08645 PF00290 Tryptophan synthase alpha chain LPH44_08650 PF00291 Pyridoxal-phosphate dependent enzyme LPH44_08655 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPH44_08660 PF01416 tRNA pseudouridine synthase LPH44_08670 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH44_08670 PF02774 Semialdehyde dehydrogenase, dimerisation domain LPH44_08680 PF01264 Chorismate synthase LPH44_08685 PF05175 Methyltransferase small domain LPH44_08695 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH44_08695 PF06594 Haemolysin-type calcium binding protein related domain LPH44_08750 PF00348 Polyprenyl synthetase LPH44_08755 PF02609 Exonuclease VII small subunit LPH44_08760 PF11734 TilS substrate C-terminal domain LPH44_08760 PF01171 PP-loop family LPH44_08760 PF09179 TilS substrate binding domain LPH44_08770 PF00375 Sodium:dicarboxylate symporter family LPH44_08775 PF00877 NlpC/P60 family LPH44_08780 PF00877 NlpC/P60 family LPH44_08785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH44_08790 PF04235 Protein of unknown function (DUF418) LPH44_08815 PF10576 Iron-sulfur binding domain of endonuclease III LPH44_08815 PF00633 Helix-hairpin-helix motif LPH44_08815 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH44_08830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH44_08830 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH44_08835 PF00293 NUDIX domain LPH44_08860 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LPH44_08860 PF01488 Shikimate / quinate 5-dehydrogenase LPH44_08860 PF08501 Shikimate dehydrogenase substrate binding domain LPH44_08865 PF08543 Phosphomethylpyrimidine kinase LPH44_08865 PF02581 Thiamine monophosphate synthase LPH44_08880 PF11412 Disulphide bond corrector protein DsbC LPH44_08880 PF02683 Cytochrome C biogenesis protein transmembrane region LPH44_08885 PF03091 CutA1 divalent ion tolerance protein LPH44_08890 PF00166 Chaperonin 10 Kd subunit LPH44_08895 PF00118 TCP-1/cpn60 chaperonin family LPH44_08920 PF01370 NAD dependent epimerase/dehydratase family LPH44_08925 PF01370 NAD dependent epimerase/dehydratase family LPH44_08930 PF16363 GDP-mannose 4,6 dehydratase LPH44_08945 PF00291 Pyridoxal-phosphate dependent enzyme LPH44_08965 PF00593 TonB dependent receptor LPH44_08965 PF07715 TonB-dependent Receptor Plug Domain LPH44_08970 PF18331 PKHD-type hydroxylase C-terminal domain LPH44_08970 PF13640 2OG-Fe(II) oxygenase superfamily LPH44_08990 PF02424 ApbE family LPH44_08995 PF00667 FAD binding domain LPH44_08995 PF00258 Flavodoxin LPH44_08995 PF00175 Oxidoreductase NAD-binding domain LPH44_09010 PF01636 Phosphotransferase enzyme family LPH44_09015 PF00483 Nucleotidyl transferase LPH44_09020 PF00308 Bacterial dnaA protein LPH44_09025 PF01594 AI-2E family transporter LPH44_09035 PF00586 AIR synthase related protein, N-terminal domain LPH44_09035 PF02769 AIR synthase related protein, C-terminal domain LPH44_09040 PF00551 Formyl transferase LPH44_09055 PF02223 Thymidylate kinase LPH44_09060 PF05649 Peptidase family M13 LPH44_09060 PF01431 Peptidase family M13 LPH44_09065 PF07977 FabA-like domain LPH44_09070 PF01171 PP-loop family LPH44_09075 PF04381 Putative exonuclease, RdgC LPH44_09085 PF00762 Ferrochelatase LPH44_09095 PF02416 mttA/Hcf106 family LPH44_09100 PF02416 mttA/Hcf106 family LPH44_09105 PF00902 Sec-independent protein translocase protein (TatC) LPH44_09115 PF00117 Glutamine amidotransferase class-I LPH44_09115 PF00958 GMP synthase C terminal domain LPH44_09115 PF02540 NAD synthase LPH44_09120 PF00127 Copper binding proteins, plastocyanin/azurin family LPH44_09125 PF03193 RsgA GTPase LPH44_09130 PF02021 Uncharacterised protein family UPF0102 LPH44_09135 PF04348 LppC putative lipoprotein LPH44_09140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH44_09145 PF07715 TonB-dependent Receptor Plug Domain LPH44_09145 PF00593 TonB dependent receptor LPH44_09150 PF01588 Putative tRNA binding domain LPH44_09150 PF09334 tRNA synthetases class I (M) LPH44_09160 PF04060 Putative Fe-S cluster LPH44_09205 PF07687 Peptidase dimerisation domain LPH44_09205 PF01546 Peptidase family M20/M25/M40 LPH44_09230 PF05567 Neisseria PilC beta-propeller domain LPH44_09255 PF03641 Possible lysine decarboxylase LPH44_09255 PF11892 Domain of unknown function (DUF3412) LPH44_09255 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LPH44_09265 PF12792 CSS motif domain associated with EAL LPH44_09265 PF00563 EAL domain LPH44_09275 PF00899 ThiF family LPH44_09280 PF01926 50S ribosome-binding GTPase LPH44_09280 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LPH44_09285 PF01011 PQQ enzyme repeat LPH44_09285 PF13360 PQQ-like domain LPH44_09305 PF04055 Radical SAM superfamily LPH44_09310 PF00334 Nucleoside diphosphate kinase LPH44_09315 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LPH44_09315 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LPH44_09320 PF00709 Adenylosuccinate synthetase LPH44_09330 PF01145 SPFH domain / Band 7 family LPH44_09335 PF12221 Bacterial membrane protein N terminal LPH44_09335 PF01145 SPFH domain / Band 7 family LPH44_09340 PF08240 Alcohol dehydrogenase GroES-like domain LPH44_09340 PF00107 Zinc-binding dehydrogenase LPH44_09345 PF00072 Response regulator receiver domain LPH44_09360 PF03129 Anticodon binding domain LPH44_09360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH44_09360 PF04073 Aminoacyl-tRNA editing domain LPH44_09370 PF01066 CDP-alcohol phosphatidyltransferase LPH44_09380 PF00583 Acetyltransferase (GNAT) family LPH44_09395 PF14310 Fibronectin type III-like domain LPH44_09395 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH44_09395 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH44_09400 PF00924 Mechanosensitive ion channel LPH44_09405 PF02152 Dihydroneopterin aldolase LPH44_09410 PF00814 Glycoprotease family LPH44_09415 PF01165 Ribosomal protein S21 LPH44_09420 PF09424 Yqey-like protein LPH44_09425 PF03631 Virulence factor BrkB LPH44_09430 PF10410 DnaB-helicase binding domain of primase LPH44_09430 PF08278 DNA primase DnaG DnaB-binding LPH44_09430 PF08275 DNA primase catalytic core, N-terminal domain LPH44_09430 PF01807 CHC2 zinc finger LPH44_09440 PF00579 tRNA synthetases class I (W and Y) LPH44_09445 PF13538 UvrD-like helicase C-terminal domain LPH44_09450 PF13361 UvrD-like helicase C-terminal domain LPH44_09450 PF00580 UvrD/REP helicase N-terminal domain LPH44_09450 PF12705 PD-(D/E)XK nuclease superfamily LPH44_09455 PF17946 RecC C-terminal domain LPH44_09460 PF00005 ABC transporter LPH44_09465 PF02405 Permease MlaE LPH44_09470 PF02470 MlaD protein LPH44_09475 PF05494 MlaC protein LPH44_09485 PF04333 MlaA lipoprotein LPH44_09490 PF02646 RmuC family LPH44_09495 PF00005 ABC transporter LPH44_09510 PF13520 Amino acid permease LPH44_09520 PF10672 S-adenosylmethionine-dependent methyltransferase LPH44_09520 PF17785 PUA-like domain LPH44_09525 PF03741 Integral membrane protein TerC family LPH44_09540 PF01521 Iron-sulphur cluster biosynthesis LPH44_09555 PF00072 Response regulator receiver domain LPH44_09555 PF00486 Transcriptional regulatory protein, C terminal LPH44_09560 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH44_09560 PF00672 HAMP domain LPH44_09560 PF00072 Response regulator receiver domain LPH44_09560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_09560 PF00512 His Kinase A (phospho-acceptor) domain LPH44_09560 PF01627 Hpt domain LPH44_09565 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH44_09565 PF00072 Response regulator receiver domain LPH44_09565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_09565 PF00512 His Kinase A (phospho-acceptor) domain LPH44_09565 PF00672 HAMP domain LPH44_09565 PF01627 Hpt domain LPH44_09570 PF00210 Ferritin-like domain LPH44_09595 PF02773 S-adenosylmethionine synthetase, C-terminal domain LPH44_09595 PF02772 S-adenosylmethionine synthetase, central domain LPH44_09595 PF00438 S-adenosylmethionine synthetase, N-terminal domain LPH44_09605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_09610 PF00072 Response regulator receiver domain LPH44_09610 PF00486 Transcriptional regulatory protein, C terminal LPH44_09620 PF01207 Dihydrouridine synthase (Dus) LPH44_09625 PF00593 TonB dependent receptor LPH44_09625 PF07715 TonB-dependent Receptor Plug Domain LPH44_09640 PF10431 C-terminal, D2-small domain, of ClpB protein LPH44_09640 PF02861 Clp amino terminal domain, pathogenicity island component LPH44_09640 PF17871 AAA lid domain LPH44_09640 PF07724 AAA domain (Cdc48 subfamily) LPH44_09640 PF00004 ATPase family associated with various cellular activities (AAA) LPH44_09650 PF00301 Rubredoxin LPH44_09655 PF02581 Thiamine monophosphate synthase LPH44_09665 PF00067 Cytochrome P450 LPH44_09695 PF00772 DnaB-like helicase N terminal domain LPH44_09695 PF03796 DnaB-like helicase C terminal domain LPH44_09700 PF05736 OprF membrane domain LPH44_09700 PF00691 OmpA family LPH44_09710 PF00248 Aldo/keto reductase family LPH44_09715 PF00905 Penicillin binding protein transpeptidase domain LPH44_09715 PF00912 Transglycosylase LPH44_09715 PF17092 Penicillin-binding protein OB-like domain LPH44_09720 PF11104 Type IV pilus assembly protein PilM; LPH44_09725 PF05137 Fimbrial assembly protein (PilN) LPH44_09730 PF04350 Pilus assembly protein, PilO LPH44_09735 PF04351 Pilus assembly protein, PilP LPH44_09740 PF03958 Bacterial type II/III secretion system short domain LPH44_09740 PF00263 Bacterial type II and III secretion system protein LPH44_09740 PF07660 Secretin and TonB N terminus short domain LPH44_09740 PF11741 AMIN domain LPH44_09750 PF08019 Phosphoethanolamine transferase EptA/EptB LPH44_09750 PF00884 Sulfatase LPH44_09755 PF00067 Cytochrome P450 LPH44_09760 PF00270 DEAD/DEAH box helicase LPH44_09760 PF00271 Helicase conserved C-terminal domain LPH44_09760 PF17191 RecG wedge domain LPH44_09765 PF01042 Endoribonuclease L-PSP LPH44_09770 PF13291 ACT domain LPH44_09770 PF04607 Region found in RelA / SpoT proteins LPH44_09770 PF02824 TGS domain LPH44_09780 PF01565 FAD binding domain LPH44_09780 PF02913 FAD linked oxidases, C-terminal domain LPH44_09785 PF05736 OprF membrane domain LPH44_09785 PF00691 OmpA family LPH44_09790 PF02600 Disulfide bond formation protein DsbB LPH44_09795 PF00593 TonB dependent receptor LPH44_09795 PF07715 TonB-dependent Receptor Plug Domain LPH44_09800 PF02590 Predicted SPOUT methyltransferase LPH44_09815 PF00271 Helicase conserved C-terminal domain LPH44_09815 PF17757 UvrB interaction domain LPH44_09815 PF12344 Ultra-violet resistance protein B LPH44_09815 PF02151 UvrB/uvrC motif LPH44_09815 PF04851 Type III restriction enzyme, res subunit LPH44_09830 PF00701 Dihydrodipicolinate synthetase family LPH44_09840 PF00578 AhpC/TSA family LPH44_09845 PF13638 PIN domain LPH44_09845 PF02562 PhoH-like protein LPH44_09865 PF02769 AIR synthase related protein, C-terminal domain LPH44_09865 PF00586 AIR synthase related protein, N-terminal domain LPH44_09870 PF01029 NusB family LPH44_09875 PF00885 6,7-dimethyl-8-ribityllumazine synthase LPH44_09880 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LPH44_09880 PF00925 GTP cyclohydrolase II LPH44_09885 PF00677 Lumazine binding domain LPH44_09890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LPH44_09890 PF01872 RibD C-terminal domain LPH44_09900 PF03477 ATP cone domain LPH44_09910 PF00464 Serine hydroxymethyltransferase LPH44_09915 PF00005 ABC transporter LPH44_09915 PF12848 ABC transporter LPH44_09920 PF06039 Malate:quinone oxidoreductase (Mqo) LPH44_09925 PF04134 Protein of unknown function, DUF393 LPH44_09930 PF02578 Multi-copper polyphenol oxidoreductase laccase LPH44_09935 PF01479 S4 domain LPH44_09935 PF00849 RNA pseudouridylate synthase LPH44_09940 PF13525 Outer membrane lipoprotein LPH44_09950 PF07664 Ferrous iron transport protein B C terminus LPH44_09950 PF02421 Ferrous iron transport protein B LPH44_09950 PF07670 Nucleoside recognition LPH44_09970 PF04386 Stringent starvation protein B LPH44_09975 PF00043 Glutathione S-transferase, C-terminal domain LPH44_09975 PF02798 Glutathione S-transferase, N-terminal domain LPH44_09995 PF01464 Transglycosylase SLT domain LPH44_10000 PF01938 TRAM domain LPH44_10000 PF00919 Uncharacterized protein family UPF0004 LPH44_10000 PF04055 Radical SAM superfamily LPH44_10005 PF02562 PhoH-like protein LPH44_10010 PF02130 Uncharacterized protein family UPF0054 LPH44_10020 PF03471 Transporter associated domain LPH44_10020 PF00571 CBS domain LPH44_10050 PF04829 Pre-toxin domain with VENN motif LPH44_10050 PF05860 haemagglutination activity domain LPH44_10050 PF13332 Hemagglutinin repeat LPH44_10055 PF04829 Pre-toxin domain with VENN motif LPH44_10055 PF05860 haemagglutination activity domain LPH44_10055 PF13332 Hemagglutinin repeat LPH44_10055 PF13018 Extended Signal Peptide of Type V secretion system LPH44_10060 PF17287 POTRA domain LPH44_10060 PF08479 POTRA domain, ShlB-type LPH44_10060 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LPH44_10070 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH44_10070 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH44_10075 PF01008 Initiation factor 2 subunit family LPH44_10085 PF00152 tRNA synthetases class II (D, K and N) LPH44_10090 PF00583 Acetyltransferase (GNAT) family LPH44_10095 PF12826 Helix-hairpin-helix motif LPH44_10095 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LPH44_10095 PF03120 NAD-dependent DNA ligase OB-fold domain LPH44_10095 PF01653 NAD-dependent DNA ligase adenylation domain LPH44_10095 PF00533 BRCA1 C Terminus (BRCT) domain LPH44_10105 PF04354 ZipA, C-terminal FtsZ-binding domain LPH44_10110 PF02463 RecF/RecN/SMC N terminal domain LPH44_10115 PF01281 Ribosomal protein L9, N-terminal domain LPH44_10115 PF03948 Ribosomal protein L9, C-terminal domain LPH44_10120 PF01084 Ribosomal protein S18 LPH44_10125 PF01250 Ribosomal protein S6 LPH44_10130 PF01521 Iron-sulphur cluster biosynthesis LPH44_10135 PF00152 tRNA synthetases class II (D, K and N) LPH44_10135 PF01336 OB-fold nucleic acid binding domain LPH44_10140 PF01061 ABC-2 type transporter LPH44_10145 PF00005 ABC transporter LPH44_10155 PF01180 Dihydroorotate dehydrogenase LPH44_10160 PF01565 FAD binding domain LPH44_10160 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LPH44_10165 PF00892 EamA-like transporter family LPH44_10170 PF01569 PAP2 superfamily LPH44_10175 PF04551 GcpE protein LPH44_10185 PF00072 Response regulator receiver domain LPH44_10190 PF00889 Elongation factor TS LPH44_10195 PF00318 Ribosomal protein S2 LPH44_10210 PF00005 ABC transporter LPH44_10210 PF00664 ABC transporter transmembrane region LPH44_10230 PF02321 Outer membrane efflux protein LPH44_10235 PF12850 Calcineurin-like phosphoesterase superfamily domain LPH44_10240 PF02541 Ppx/GppA phosphatase family LPH44_10245 PF13089 Polyphosphate kinase N-terminal domain LPH44_10245 PF17941 Polyphosphate kinase C-terminal domain 1 LPH44_10245 PF02503 Polyphosphate kinase middle domain LPH44_10245 PF13090 Polyphosphate kinase C-terminal domain 2 LPH44_10250 PF11808 Phosphate regulon sensor protein PhoR LPH44_10250 PF00989 PAS fold LPH44_10250 PF00512 His Kinase A (phospho-acceptor) domain LPH44_10250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_10255 PF00486 Transcriptional regulatory protein, C terminal LPH44_10255 PF00072 Response regulator receiver domain LPH44_10260 PF13181 Tetratricopeptide repeat LPH44_10260 PF01435 Peptidase family M48 LPH44_10265 PF00462 Glutaredoxin LPH44_10270 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH44_10280 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LPH44_10280 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPH44_10290 PF11953 Domain of unknown function (DUF3470) LPH44_10290 PF00037 4Fe-4S binding domain LPH44_10300 PF01106 NifU-like domain LPH44_10305 PF01329 Pterin 4 alpha carbinolamine dehydratase LPH44_10320 PF00849 RNA pseudouridylate synthase LPH44_10320 PF01479 S4 domain LPH44_10325 PF00575 S1 RNA binding domain LPH44_10325 PF10150 Ribonuclease E/G family LPH44_10325 PF12111 Polyribonucleotide phosphorylase C terminal LPH44_10330 PF00072 Response regulator receiver domain LPH44_10330 PF00196 Bacterial regulatory proteins, luxR family LPH44_10335 PF17773 UPF0176 acylphosphatase like domain LPH44_10345 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH44_10345 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH44_10350 PF00545 ribonuclease LPH44_10360 PF00005 ABC transporter LPH44_10360 PF16326 ABC transporter C-terminal domain LPH44_10360 PF12848 ABC transporter LPH44_10365 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LPH44_10370 PF00313 'Cold-shock' DNA-binding domain LPH44_10380 PF01435 Peptidase family M48 LPH44_10385 PF03144 Elongation factor Tu domain 2 LPH44_10385 PF03143 Elongation factor Tu C-terminal domain LPH44_10385 PF00009 Elongation factor Tu GTP binding domain LPH44_10390 PF03144 Elongation factor Tu domain 2 LPH44_10390 PF00009 Elongation factor Tu GTP binding domain LPH44_10390 PF03764 Elongation factor G, domain IV LPH44_10390 PF14492 Elongation Factor G, domain II LPH44_10390 PF00679 Elongation factor G C-terminus LPH44_10395 PF00177 Ribosomal protein S7p/S5e LPH44_10400 PF00164 Ribosomal protein S12/S23 LPH44_10405 PF05000 RNA polymerase Rpb1, domain 4 LPH44_10405 PF04983 RNA polymerase Rpb1, domain 3 LPH44_10405 PF00623 RNA polymerase Rpb1, domain 2 LPH44_10405 PF04997 RNA polymerase Rpb1, domain 1 LPH44_10405 PF04998 RNA polymerase Rpb1, domain 5 LPH44_10410 PF04565 RNA polymerase Rpb2, domain 3 LPH44_10410 PF04563 RNA polymerase beta subunit LPH44_10410 PF04561 RNA polymerase Rpb2, domain 2 LPH44_10410 PF10385 RNA polymerase beta subunit external 1 domain LPH44_10410 PF04560 RNA polymerase Rpb2, domain 7 LPH44_10410 PF00562 RNA polymerase Rpb2, domain 6 LPH44_10415 PF00542 Ribosomal protein L7/L12 C-terminal domain LPH44_10415 PF16320 Ribosomal protein L7/L12 dimerisation domain LPH44_10420 PF00466 Ribosomal protein L10 LPH44_10425 PF00687 Ribosomal protein L1p/L10e family LPH44_10430 PF03946 Ribosomal protein L11, N-terminal domain LPH44_10430 PF00298 Ribosomal protein L11, RNA binding domain LPH44_10435 PF00467 KOW motif LPH44_10435 PF02357 Transcription termination factor nusG LPH44_10440 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LPH44_10450 PF03144 Elongation factor Tu domain 2 LPH44_10450 PF00009 Elongation factor Tu GTP binding domain LPH44_10450 PF03143 Elongation factor Tu C-terminal domain LPH44_10470 PF01926 50S ribosome-binding GTPase LPH44_10470 PF06071 Protein of unknown function (DUF933) LPH44_10475 PF01195 Peptidyl-tRNA hydrolase LPH44_10480 PF01386 Ribosomal L25p family LPH44_10480 PF14693 Ribosomal protein TL5, C-terminal domain LPH44_10485 PF14572 Phosphoribosyl synthetase-associated domain LPH44_10485 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LPH44_10495 PF08544 GHMP kinases C terminal LPH44_10495 PF00288 GHMP kinases N terminal domain LPH44_10500 PF03550 Outer membrane lipoprotein LolB LPH44_10510 PF01488 Shikimate / quinate 5-dehydrogenase LPH44_10510 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LPH44_10510 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LPH44_10515 PF00472 RF-1 domain LPH44_10515 PF03462 PCRF domain LPH44_10520 PF01170 Putative RNA methylase family UPF0020 LPH44_10520 PF02926 THUMP domain LPH44_10520 PF10672 S-adenosylmethionine-dependent methyltransferase LPH44_10585 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPH44_10590 PF00528 Binding-protein-dependent transport system inner membrane component LPH44_10595 PF00005 ABC transporter LPH44_10600 PF00528 Binding-protein-dependent transport system inner membrane component LPH44_10605 PF12705 PD-(D/E)XK nuclease superfamily LPH44_10605 PF00580 UvrD/REP helicase N-terminal domain LPH44_10605 PF13361 UvrD-like helicase C-terminal domain LPH44_10615 PF01914 MarC family integral membrane protein LPH44_10620 PF00462 Glutaredoxin LPH44_10625 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LPH44_10625 PF02222 ATP-grasp domain LPH44_10630 PF00731 AIR carboxylase LPH44_10650 PF07732 Multicopper oxidase LPH44_10650 PF07731 Multicopper oxidase LPH44_10660 PF00580 UvrD/REP helicase N-terminal domain LPH44_10660 PF13361 UvrD-like helicase C-terminal domain LPH44_10670 PF04349 Periplasmic glucan biosynthesis protein, MdoG LPH44_10675 PF01343 Peptidase family S49 LPH44_10680 PF01554 MatE LPH44_10695 PF00271 Helicase conserved C-terminal domain LPH44_10695 PF17764 3′ DNA-binding domain (3′BD) LPH44_10695 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LPH44_10695 PF18074 Primosomal protein N C-terminal domain LPH44_10695 PF00270 DEAD/DEAH box helicase LPH44_10700 PF04542 Sigma-70 region 2 LPH44_10700 PF00140 Sigma-70 factor, region 1.2 LPH44_10700 PF04545 Sigma-70, region 4 LPH44_10705 PF03167 Uracil DNA glycosylase superfamily LPH44_10710 PF01339 CheB methylesterase LPH44_10710 PF00072 Response regulator receiver domain LPH44_10715 PF18075 FtsX extracellular domain LPH44_10720 PF00005 ABC transporter LPH44_10725 PF00270 DEAD/DEAH box helicase LPH44_10725 PF00271 Helicase conserved C-terminal domain LPH44_10725 PF12300 ATP-dependent RNA helicase RhlB LPH44_10730 PF00085 Thioredoxin LPH44_10735 PF07497 Rho termination factor, RNA-binding domain LPH44_10735 PF07498 Rho termination factor, N-terminal domain LPH44_10735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH44_10740 PF03971 Monomeric isocitrate dehydrogenase LPH44_10745 PF09704 CRISPR-associated protein (Cas_Cas5) LPH44_10760 PF13180 PDZ domain LPH44_10760 PF03572 Peptidase family S41 LPH44_10765 PF01551 Peptidase family M23 LPH44_10775 PF00150 Cellulase (glycosyl hydrolase family 5) LPH44_10795 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH44_10795 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LPH44_10800 PF04898 Glutamate synthase central domain LPH44_10800 PF00310 Glutamine amidotransferases class-II LPH44_10800 PF01493 GXGXG motif LPH44_10800 PF01645 Conserved region in glutamate synthase LPH44_10810 PF14748 Pyrroline-5-carboxylate reductase dimerisation LPH44_10810 PF03807 NADP oxidoreductase coenzyme F420-dependent LPH44_10895 PF13332 Hemagglutinin repeat LPH44_10895 PF05860 haemagglutination activity domain LPH44_10895 PF04829 Pre-toxin domain with VENN motif LPH44_10900 PF04829 Pre-toxin domain with VENN motif LPH44_10900 PF05860 haemagglutination activity domain LPH44_10900 PF13332 Hemagglutinin repeat LPH44_10900 PF13018 Extended Signal Peptide of Type V secretion system LPH44_10940 PF18766 SWI2/SNF2 ATPase LPH44_10940 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH44_10940 PF12008 Type I restriction and modification enzyme - subunit R C terminal LPH44_10945 PF01420 Type I restriction modification DNA specificity domain LPH44_10955 PF12161 HsdM N-terminal domain LPH44_10955 PF02384 N-6 DNA Methylase LPH44_11040 PF11867 Domain of unknown function (DUF3387) LPH44_11040 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH44_11040 PF18766 SWI2/SNF2 ATPase LPH44_11045 PF01420 Type I restriction modification DNA specificity domain LPH44_11050 PF02384 N-6 DNA Methylase LPH44_11055 PF02384 N-6 DNA Methylase LPH44_11170 PF01638 HxlR-like helix-turn-helix LPH44_11175 PF00106 short chain dehydrogenase LPH44_11195 PF14814 Bifunctional transglycosylase second domain LPH44_11195 PF00905 Penicillin binding protein transpeptidase domain LPH44_11195 PF00912 Transglycosylase LPH44_11205 PF13307 Helicase C-terminal domain LPH44_11205 PF04851 Type III restriction enzyme, res subunit LPH44_11215 PF00484 Carbonic anhydrase LPH44_11220 PF00534 Glycosyl transferases group 1 LPH44_11225 PF01522 Polysaccharide deacetylase LPH44_11235 PF09383 NIL domain LPH44_11235 PF00005 ABC transporter LPH44_11240 PF00528 Binding-protein-dependent transport system inner membrane component LPH44_11245 PF03180 NLPA lipoprotein LPH44_11260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH44_11260 PF00364 Biotin-requiring enzyme LPH44_11260 PF02817 e3 binding domain LPH44_11265 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH44_11265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH44_11275 PF01545 Cation efflux family LPH44_11280 PF01053 Cys/Met metabolism PLP-dependent enzyme LPH44_11285 PF00561 alpha/beta hydrolase fold LPH44_11290 PF01551 Peptidase family M23 LPH44_11295 PF01975 Survival protein SurE LPH44_11310 PF01551 Peptidase family M23 LPH44_11310 PF01476 LysM domain LPH44_11325 PF01168 Alanine racemase, N-terminal domain LPH44_11325 PF00842 Alanine racemase, C-terminal domain LPH44_11330 PF01266 FAD dependent oxidoreductase LPH44_11340 PF01641 SelR domain LPH44_11350 PF07691 PA14 domain LPH44_11350 PF02838 Glycosyl hydrolase family 20, domain 2 LPH44_11350 PF00728 Glycosyl hydrolase family 20, catalytic domain LPH44_11360 PF14310 Fibronectin type III-like domain LPH44_11360 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH44_11360 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH44_11360 PF07691 PA14 domain LPH44_11375 PF17678 Glycosyl hydrolase family 92 N-terminal domain LPH44_11375 PF07971 Glycosyl hydrolase family 92 LPH44_11380 PF01301 Glycosyl hydrolases family 35 LPH44_11385 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LPH44_11390 PF09312 SurA N-terminal domain LPH44_11390 PF00639 PPIC-type PPIASE domain LPH44_11395 PF04453 LPS transport system D LPH44_11405 PF01494 FAD binding domain LPH44_11410 PF01494 FAD binding domain LPH44_11415 PF06719 AraC-type transcriptional regulator N-terminus LPH44_11415 PF12833 Helix-turn-helix domain LPH44_11420 PF02525 Flavodoxin-like fold LPH44_11430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH44_11430 PF03466 LysR substrate binding domain LPH44_11435 PF10414 Sirohaem synthase dimerisation region LPH44_11435 PF14824 Sirohaem biosynthesis protein central LPH44_11435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH44_11440 PF00291 Pyridoxal-phosphate dependent enzyme LPH44_11450 PF00274 Fructose-bisphosphate aldolase class-I LPH44_11460 PF02887 Pyruvate kinase, alpha/beta domain LPH44_11460 PF00224 Pyruvate kinase, barrel domain LPH44_11465 PF00162 Phosphoglycerate kinase LPH44_11480 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH44_11485 PF01475 Ferric uptake regulator family LPH44_11500 PF00150 Cellulase (glycosyl hydrolase family 5) LPH44_11500 PF00553 Cellulose binding domain LPH44_11510 PF05193 Peptidase M16 inactive domain LPH44_11510 PF00675 Insulinase (Peptidase family M16) LPH44_11525 PF03330 Lytic transglycolase LPH44_11530 PF02810 SEC-C motif LPH44_11530 PF07517 SecA DEAD-like domain LPH44_11530 PF01043 SecA preprotein cross-linking domain LPH44_11530 PF07516 SecA Wing and Scaffold domain LPH44_11535 PF01476 LysM domain LPH44_11535 PF08525 Opacity-associated protein A N-terminal motif LPH44_11535 PF01551 Peptidase family M23 LPH44_11545 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LPH44_11550 PF12327 FtsZ family, C-terminal domain LPH44_11550 PF00091 Tubulin/FtsZ family, GTPase domain LPH44_11555 PF02491 SHS2 domain inserted in FTSA LPH44_11560 PF03799 Cell division protein FtsQ LPH44_11560 PF08478 POTRA domain, FtsQ-type LPH44_11565 PF07478 D-ala D-ala ligase C-terminus LPH44_11570 PF08245 Mur ligase middle domain LPH44_11570 PF02875 Mur ligase family, glutamate ligase domain LPH44_11570 PF01225 Mur ligase family, catalytic domain LPH44_11575 PF03033 Glycosyltransferase family 28 N-terminal domain LPH44_11575 PF04101 Glycosyltransferase family 28 C-terminal domain LPH44_11580 PF01098 Cell cycle protein LPH44_11585 PF00953 Glycosyl transferase family 4 LPH44_11590 PF02875 Mur ligase family, glutamate ligase domain LPH44_11590 PF08245 Mur ligase middle domain LPH44_11590 PF01225 Mur ligase family, catalytic domain LPH44_11595 PF08245 Mur ligase middle domain LPH44_11595 PF02875 Mur ligase family, glutamate ligase domain LPH44_11595 PF01225 Mur ligase family, catalytic domain LPH44_11600 PF03717 Penicillin-binding Protein dimerisation domain LPH44_11600 PF00905 Penicillin binding protein transpeptidase domain LPH44_11605 PF04999 Cell division protein FtsL LPH44_11610 PF01795 MraW methylase family LPH44_11615 PF02381 MraZ protein, putative antitoxin-like LPH44_11620 PF02080 TrkA-C domain LPH44_11620 PF03600 Citrate transporter LPH44_11625 PF02390 Putative methyltransferase LPH44_11630 PF05690 Thiazole biosynthesis protein ThiG LPH44_11640 PF00657 GDSL-like Lipase/Acylhydrolase LPH44_11640 PF03797 Autotransporter beta-domain LPH44_11670 PF07977 FabA-like domain LPH44_11695 PF00692 dUTPase LPH44_11705 PF08676 MutL C terminal dimerisation domain LPH44_11705 PF01119 DNA mismatch repair protein, C-terminal domain LPH44_11710 PF01520 N-acetylmuramoyl-L-alanine amidase LPH44_11710 PF11741 AMIN domain LPH44_11715 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPH44_11720 PF01256 Carbohydrate kinase LPH44_11720 PF03853 YjeF-related protein N-terminus LPH44_11725 PF13742 OB-fold nucleic acid binding domain LPH44_11725 PF02601 Exonuclease VII, large subunit LPH44_11740 PF00570 HRDC domain LPH44_11740 PF01612 3'-5' exonuclease LPH44_11770 PF00216 Bacterial DNA-binding protein LPH44_11775 PF03147 Ferredoxin-fold anticodon binding domain LPH44_11775 PF03484 tRNA synthetase B5 domain LPH44_11775 PF03483 B3/4 domain LPH44_11775 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LPH44_11775 PF01588 Putative tRNA binding domain LPH44_11780 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LPH44_11780 PF01409 tRNA synthetases class II core domain (F) LPH44_11785 PF00453 Ribosomal protein L20 LPH44_11790 PF01632 Ribosomal protein L35 LPH44_11795 PF05198 Translation initiation factor IF-3, N-terminal domain LPH44_11795 PF00707 Translation initiation factor IF-3, C-terminal domain LPH44_11800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH44_11800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH44_11800 PF02824 TGS domain LPH44_11800 PF03129 Anticodon binding domain LPH44_11815 PF18030 RimK PreATP-grasp domain LPH44_11815 PF08443 RimK-like ATP-grasp domain LPH44_11820 PF00486 Transcriptional regulatory protein, C terminal LPH44_11820 PF00072 Response regulator receiver domain LPH44_11825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_11825 PF00512 His Kinase A (phospho-acceptor) domain LPH44_11825 PF11808 Phosphate regulon sensor protein PhoR LPH44_11825 PF00989 PAS fold LPH44_11830 PF01121 Dephospho-CoA kinase LPH44_11835 PF06750 Bacterial Peptidase A24 N-terminal domain LPH44_11835 PF01478 Type IV leader peptidase family LPH44_11840 PF00482 Type II secretion system (T2SS), protein F LPH44_11845 PF07963 Prokaryotic N-terminal methylation motif LPH44_11845 PF00114 Pilin (bacterial filament) LPH44_11855 PF00114 Pilin (bacterial filament) LPH44_11855 PF07963 Prokaryotic N-terminal methylation motif LPH44_11860 PF07963 Prokaryotic N-terminal methylation motif LPH44_11860 PF00114 Pilin (bacterial filament) LPH44_11870 PF00437 Type II/IV secretion system protein LPH44_11870 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH44_11875 PF02954 Bacterial regulatory protein, Fis family LPH44_11875 PF00072 Response regulator receiver domain LPH44_11875 PF00158 Sigma-54 interaction domain LPH44_11880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH44_11880 PF00512 His Kinase A (phospho-acceptor) domain LPH44_11885 PF08442 ATP-grasp domain LPH44_11885 PF00549 CoA-ligase LPH44_11890 PF02629 CoA binding domain LPH44_11890 PF00549 CoA-ligase LPH44_11895 PF10396 GTP-binding protein TrmE N-terminus LPH44_11895 PF12631 MnmE helical domain LPH44_11895 PF01926 50S ribosome-binding GTPase LPH44_11905 PF02096 60Kd inner membrane protein LPH44_11905 PF14849 YidC periplasmic domain LPH44_11910 PF00825 Ribonuclease P LPH44_11915 PF00468 Ribosomal protein L34 LPH44_11925 PF00171 Aldehyde dehydrogenase family LPH44_11925 PF01619 Proline dehydrogenase LPH44_11925 PF14850 DNA-binding domain of Proline dehydrogenase LPH44_11925 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LPH44_11960 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LPH44_11980 PF04335 VirB8 protein LPH44_11990 PF03743 Bacterial conjugation TrbI-like protein LPH44_11995 PF00437 Type II/IV secretion system protein LPH44_12000 PF02534 Type IV secretory system Conjugative DNA transfer LPH44_12060 PF00239 Resolvase, N terminal domain LPH44_12060 PF02796 Helix-turn-helix domain of resolvase LPH44_12100 PF01385 Probable transposase LPH44_12100 PF07282 Putative transposase DNA-binding domain LPH44_12100 PF12323 Helix-turn-helix domain LPH44_12115 PF08681 Protein of unknown function (DUF1778)